Peter Simons
bb42c215e2
R: improve support for CRAN and Bioconductor package sets
...
- Update the instructions for re-generating each of the package set files.
- Provide test-evaluation.nix expression to verify that the package sets evaluates.
- Update list of known broken packages.
2015-06-17 23:19:56 +02:00
Jeffrey David Johnson
93a742fd28
R: add support for Bioconductor packages
2015-06-17 23:19:56 +02:00
Peter Simons
362e60a5dc
r-modules: fix rapportools
2015-06-16 12:48:50 +02:00
Peter Simons
21c18c4f0a
r-modules: fix rapport
2015-06-16 12:48:50 +02:00
Peter Simons
ccd6988b3d
r-modules: fix xml2
2015-06-16 12:48:50 +02:00
Peter Simons
8ac6350ce7
r-modules: fix pander
2015-06-16 12:48:50 +02:00
Peter Simons
9fc5317055
r-modules: fix curl
2015-06-16 12:48:50 +02:00
Peter Simons
d4c810cccd
r-modules: disable broken packages to avoid Hydra evaluation errors
2015-06-16 12:48:49 +02:00
Thomas Tuegel
8245caedf1
rPackages.SamplerCompare: build with openblas
2015-06-09 11:47:40 -05:00
Thomas Tuegel
58754130cc
rPackages.slfm: build with openblas
2015-06-09 11:47:26 -05:00
Thomas Tuegel
77aa1c990e
rPackages.Mposterior: build with openblas
2015-06-09 11:47:12 -05:00
Thomas Tuegel
b120a737fd
rPackages.BayesLogit: build with openblas
2015-06-09 11:43:00 -05:00
Peter Simons
949746f9f5
r-modules: disable broken builds
2015-05-15 13:48:38 +02:00
Peter Simons
278df52729
r-xml2: fix build
2015-05-15 13:47:27 +02:00
Peter Simons
aaa9f837a9
r-modules: fix Hydra evaluation errors
2015-05-13 11:31:39 +02:00
Michel Kuhlmann
aabee7eb46
r-modules: regenerate 2015-05-11T14:48:00+0100
2015-05-12 07:47:41 +02:00
Peter Simons
e313cd711e
r-modules: disable broken builds on Hydra
2015-04-20 17:38:46 +02:00
Peter Simons
0b088ce581
r-modules: revert "disable builds that depend on broken gdal library"
...
This reverts commit 9e9b5e6e691645795c53
2015-04-19 17:52:50 +02:00
Peter Simons
9e9b5e6e69
r-modules: disable builds that depend on broken gdal library
2015-04-17 20:02:46 +02:00
Michel Kuhlmann
cc5f5f0fd3
r-modules: update from CRAN state at 2015-04-16T11:23:00+0100
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Closes https://github.com/NixOS/nixpkgs/pull/7411 .
2015-04-17 15:38:12 +02:00
William A. Kennington III
758319f67f
One more mysql fix
2015-04-01 16:52:38 -07:00
Peter Simons
aed1895643
r-modules: remedy remaining Hydra failures
2015-03-29 00:17:55 +01:00
Peter Simons
f6886c62dc
r-modules: disable broken builds on Hydra
2015-03-28 10:36:54 +01:00
Michel Kuhlmann
c96bc1e507
r-modules: fixing rggobi by adding initial expression for ggobi
2015-03-26 12:20:07 +01:00
Peter Simons
5238bfb73f
r-modules: fix evaluation errors
2015-03-21 23:33:50 +01:00
Joachim Fasting
0e52c562b5
RAppArmor: use AppArmor 2.9
2015-03-19 14:14:28 +01:00
Peter Simons
d388855731
r-SID: mark broken
2015-03-09 21:14:00 +01:00
Peter Simons
e8b33876af
r-Cell: drop obsolete package
2015-03-09 16:43:37 +01:00
Peter Simons
eaf728c3d3
r-modules: fix git2r, TAQMNGR, and WhopGenome
2015-03-06 11:21:21 +01:00
Peter Simons
030bd26af3
r-modules: mark daff and rjade broken
2015-03-04 12:51:43 +01:00
Adam Vogt
5adab4cbc9
remove some packages marked broken for cran-packages.nix
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those packages were removed from cran (and cran-packages.nix)
2015-02-26 16:17:15 -05:00
Peter Simons
80101c8329
Disable some broken R packages.
2015-02-22 18:22:35 +01:00
Peter Simons
7afe039842
pkgs/development/r-modules: fix evaluation errors
2015-02-20 15:08:18 +01:00
Nikolay Amiantov
8450ff3ab8
rPackages: fix broken packages
2015-02-19 23:53:36 +03:00
Nikolay Amiantov
3e6531c174
rPackages: add packagesWithRDepends
2015-02-19 23:51:24 +03:00
Nikolay Amiantov
88ab59eb73
rPackages: nicer override* functions
2015-02-19 23:50:42 +03:00
Nikolay Amiantov
0f9c0348af
rPackages: remove Xvfb where it's not needed
2015-02-19 23:49:41 +03:00
Nikolay Amiantov
6c2a607112
R: update archive url
2015-02-18 15:41:46 +03:00
Peter Simons
6b261cc4d4
rPackages: allow users to override the version of R to be used for building
2015-01-27 14:04:54 +01:00
Peter Simons
282fd58c85
r-curl: help the package find curl's headers
2015-01-26 10:23:34 +01:00
Peter Simons
7fa0fa6450
r-modules: fix evaluation and minor cleanups
2015-01-22 11:39:00 +01:00
Michel Kuhlmann
4a3be6c787
rPackages: overall update and cleaning default.nix
2015-01-21 11:15:38 +01:00
Peter Simons
1b50c50432
r-modules: enable packages that were broken by the missing gdal dependency
2015-01-14 11:24:28 +01:00
Peter Simons
9489dac1d3
r-modules: update list of broken packages
2015-01-13 12:44:11 +01:00
Peter Simons
1f49c1cef7
Mark R packages h2o, jvmr, and qtbase as broken.
...
This also breaks dependent packages qtutils, qtpaint, and bamboo.
2014-12-04 15:00:54 +01:00
Peter Simons
7ee70a1644
R-defaults: add obsolete package temporarily
2014-12-04 14:45:09 +01:00
Peter Simons
1897946daf
r-selectspm: cannot be built because it depends on the broken package ecespa
2014-12-03 16:28:29 +01:00
Peter Simons
d9f1968cab
r-modules: always set meta.platforms when meta.hydraPlatforms is set, too
...
By default, we take both values from the R derivation.
2014-12-03 16:28:28 +01:00
Peter Simons
1c15a4122b
r-modules: fix reference to cran-packages.nix
2014-12-03 16:28:28 +01:00
taku0
2d3dd68d27
cran-packages: combined packages definition files further
2014-12-03 16:28:28 +01:00
