07be047a91
julia: update rmath-julia hash for 0.1 (cherry picked from commit ea9f3fca6587494f25ef470397b32904e2325e23)
181 lines
5.3 KiB
Nix
181 lines
5.3 KiB
Nix
{ stdenv, fetchgit, fetchurl
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# build tools
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, gfortran, m4, makeWrapper, patchelf, perl, which, python2, paxctl
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# libjulia dependencies
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, libunwind, readline, utf8proc, zlib
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, llvm
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# standard library dependencies
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, curl, fftwSinglePrec, fftw, gmp, libgit2, mpfr, openlibm, openspecfun, pcre2
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# linear algebra
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, openblas, arpack, suitesparse
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# Darwin frameworks
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, CoreServices, ApplicationServices
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}:
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with stdenv.lib;
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# All dependencies must use the same OpenBLAS.
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let
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arpack_ = arpack;
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suitesparse_ = suitesparse;
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in
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let
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arpack = arpack_.override { inherit openblas; };
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suitesparse = suitesparse_.override { inherit openblas; };
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in
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let
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dsfmtVersion = "2.2.3";
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dsfmt = fetchurl {
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url = "http://www.math.sci.hiroshima-u.ac.jp/~m-mat/MT/SFMT/dSFMT-src-${dsfmtVersion}.tar.gz";
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sha256 = "03kaqbjbi6viz0n33dk5jlf6ayxqlsq4804n7kwkndiga9s4hd42";
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};
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libuvVersion = "8d5131b6c1595920dd30644cd1435b4f344b46c8";
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libuv = fetchurl {
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url = "https://api.github.com/repos/JuliaLang/libuv/tarball/${libuvVersion}";
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sha256 = "1886r04igcs0k24sbb61wn10f8ki35c39jsnc5djv3rg4hvn9l49";
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};
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rmathVersion = "0.1";
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rmath-julia = fetchurl {
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url = "https://api.github.com/repos/JuliaLang/Rmath-julia/tarball/v${rmathVersion}";
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sha256 = "1qyps217175qhid46l8f5i1v8i82slgp23ia63x2hzxwfmx8617p";
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};
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virtualenvVersion = "15.0.0";
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virtualenv = fetchurl {
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url = "mirror://pypi/v/virtualenv/virtualenv-${virtualenvVersion}.tar.gz";
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sha256 = "06fw4liazpx5vf3am45q2pdiwrv0id7ckv7n6zmpml29x6vkzmkh";
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};
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in
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stdenv.mkDerivation rec {
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pname = "julia";
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version = "0.6.0-dev-2016-11-25";
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name = "${pname}-${version}";
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src = fetchgit {
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url = "https://github.com/JuliaLang/${pname}";
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rev = "03c24644815ba5320d038bb60c08565375fea1d9";
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sha256 = "103mg9dz8yda2zxbd85jv8zhdzs29jj0dxrm2ppxpfhbbf6fxqav";
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};
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prePatch = ''
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mkdir deps/srccache
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cp "${dsfmt}" "./deps/srccache/dsfmt-${dsfmtVersion}.tar.gz"
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cp "${rmath-julia}" "./deps/srccache/Rmath-julia-${rmathVersion}.tar.gz"
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cp "${libuv}" "./deps/srccache/libuv-${libuvVersion}.tar.gz"
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cp "${virtualenv}" "./deps/srccache/virtualenv-${virtualenvVersion}.tar.gz"
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'';
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patches = [
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./0001.1-use-system-utf8proc.patch
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./0002-use-system-suitesparse.patch
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] ++ stdenv.lib.optional stdenv.needsPax ./0004-hardened.patch;
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postPatch = ''
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patchShebangs . contrib
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'';
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buildInputs = [
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arpack fftw fftwSinglePrec gmp libgit2 libunwind mpfr
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pcre2.dev openblas openlibm openspecfun readline suitesparse utf8proc
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zlib llvm
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]
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++ stdenv.lib.optionals stdenv.isDarwin [CoreServices ApplicationServices]
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;
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nativeBuildInputs = [ curl gfortran m4 makeWrapper patchelf perl python2 which ]
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++ stdenv.lib.optional stdenv.needsPax paxctl;
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makeFlags =
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let
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arch = head (splitString "-" stdenv.system);
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march = { "x86_64" = "x86-64"; "i686" = "pentium4"; }."${arch}"
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or (throw "unsupported architecture: ${arch}");
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# Julia requires Pentium 4 (SSE2) or better
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cpuTarget = { "x86_64" = "x86-64"; "i686" = "pentium4"; }."${arch}"
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or (throw "unsupported architecture: ${arch}");
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in [
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"ARCH=${arch}"
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"MARCH=${march}"
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"JULIA_CPU_TARGET=${cpuTarget}"
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"PREFIX=$(out)"
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"prefix=$(out)"
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"SHELL=${stdenv.shell}"
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"USE_SYSTEM_BLAS=1"
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"USE_BLAS64=${if openblas.blas64 then "1" else "0"}"
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"LIBBLAS=-lopenblas"
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"LIBBLASNAME=libopenblas"
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"USE_SYSTEM_LAPACK=1"
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"LIBLAPACK=-lopenblas"
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"LIBLAPACKNAME=libopenblas"
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"USE_SYSTEM_SUITESPARSE=1"
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"SUITESPARSE_LIB=-lsuitesparse"
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"SUITESPARSE_INC=-I${suitesparse}/include"
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"USE_SYSTEM_ARPACK=1"
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"USE_SYSTEM_FFTW=1"
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"USE_SYSTEM_GMP=1"
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"USE_SYSTEM_LIBGIT2=1"
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"USE_SYSTEM_LIBUNWIND=1"
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# 'replutil' test failure with LLVM 3.8.0, invalid libraries with 3.7.1
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"USE_SYSTEM_LLVM=1"
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"USE_SYSTEM_MPFR=1"
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"USE_SYSTEM_OPENLIBM=1"
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"USE_SYSTEM_OPENSPECFUN=1"
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"USE_SYSTEM_PATCHELF=1"
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"USE_SYSTEM_PCRE=1"
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"PCRE_CONFIG=${pcre2.dev}/bin/pcre2-config"
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"PCRE_INCL_PATH=${pcre2.dev}/include/pcre2.h"
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"USE_SYSTEM_READLINE=1"
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"USE_SYSTEM_UTF8PROC=1"
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"USE_SYSTEM_ZLIB=1"
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];
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NIX_CFLAGS_COMPILE = [ "-fPIC" ];
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LD_LIBRARY_PATH = makeLibraryPath [
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arpack fftw fftwSinglePrec gmp libgit2 mpfr openblas openlibm
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openspecfun pcre2 suitesparse llvm
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];
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dontStrip = true;
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dontPatchELF = true;
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enableParallelBuilding = true;
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doCheck = true;
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checkTarget = "testall";
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# Julia's tests require read/write access to $HOME
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preCheck = ''
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export HOME="$NIX_BUILD_TOP"
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'';
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preBuild = ''
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sed -e '/^install:/s@[^ ]*/doc/[^ ]*@@' -i Makefile
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sed -e '/[$](DESTDIR)[$](docdir)/d' -i Makefile
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'';
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postInstall = ''
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for prog in "$out/bin/julia" "$out/bin/julia-debug"; do
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wrapProgram "$prog" \
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--prefix LD_LIBRARY_PATH : "$LD_LIBRARY_PATH:$out/lib/julia" \
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--prefix PATH : "${stdenv.lib.makeBinPath [ curl ]}"
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done
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'';
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meta = {
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description = "High-level performance-oriented dynamical language for technical computing";
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homepage = https://julialang.org/;
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license = stdenv.lib.licenses.mit;
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maintainers = with stdenv.lib.maintainers; [ raskin ];
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platforms = [ "i686-linux" "x86_64-linux" "x86_64-darwin" ];
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broken = true; # since 2017-04-08.
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};
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}
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