65e18bd38f
Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/cytoscape/versions. These checks were done: - built on NixOS - ran ‘/nix/store/87clhargb10b1aps6nq86k0xz6yqyydz-cytoscape-3.6.1/bin/cytoscape -h’ got 0 exit code - ran ‘/nix/store/87clhargb10b1aps6nq86k0xz6yqyydz-cytoscape-3.6.1/bin/cytoscape --help’ got 0 exit code - found 3.6.1 with grep in /nix/store/87clhargb10b1aps6nq86k0xz6yqyydz-cytoscape-3.6.1 - directory tree listing: https://gist.github.com/8bad808238fc034c5394a80d8a5c1554
35 lines
878 B
Nix
35 lines
878 B
Nix
{ stdenv, fetchurl, jre, makeWrapper }:
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stdenv.mkDerivation rec {
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name = "cytoscape-${version}";
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version = "3.6.1";
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src = fetchurl {
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url = "http://chianti.ucsd.edu/${name}/${name}.tar.gz";
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sha256 = "1pkdilv1nw6vvdxk71bwjngr8yafrsqwaqvlakhp8yb342r1jd4s";
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};
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buildInputs = [jre makeWrapper];
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installPhase = ''
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mkdir -pv $out/{share,bin}
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cp -Rv * $out/share/
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ln -s $out/share/cytoscape.sh $out/bin/cytoscape
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wrapProgram $out/share/cytoscape.sh \
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--set JAVA_HOME "${jre}" \
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--set JAVA "${jre}/bin/java"
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chmod +x $out/bin/cytoscape
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'';
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meta = {
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homepage = http://www.cytoscape.org;
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description = "A general platform for complex network analysis and visualization";
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license = stdenv.lib.licenses.lgpl21;
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maintainers = [stdenv.lib.maintainers.mimadrid];
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platforms = stdenv.lib.platforms.unix;
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};
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}
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