db784d883c
Those were removed because they were added to openblas itself. There was an error with that however and it will take some time until the fix makes its way through staging. For the time being, reverting this part of26d5d030fewill fix the sage build. This commit should be reverted once408eacbc89is in master.
127 lines
2.9 KiB
Nix
127 lines
2.9 KiB
Nix
{ stdenv
|
|
, lib
|
|
, makeWrapper
|
|
, sage-env
|
|
, sage-src
|
|
, openblasCompat
|
|
, openblas-blas-pc
|
|
, openblas-cblas-pc
|
|
, openblas-lapack-pc
|
|
, pkg-config
|
|
, three
|
|
, singular
|
|
, libgap
|
|
, gap-libgap-compatible
|
|
, giac
|
|
, maxima-ecl
|
|
, pari
|
|
, gmp
|
|
, gfan
|
|
, python2
|
|
, flintqs
|
|
, eclib
|
|
, ntl
|
|
, ecm
|
|
, pynac
|
|
, pythonEnv
|
|
}:
|
|
|
|
let
|
|
buildInputs = [
|
|
pythonEnv # for patchShebangs
|
|
makeWrapper
|
|
pkg-config
|
|
openblasCompat # lots of segfaults with regular (64 bit) openblas
|
|
openblas-blas-pc
|
|
openblas-cblas-pc
|
|
openblas-lapack-pc
|
|
singular
|
|
three
|
|
pynac
|
|
giac
|
|
libgap
|
|
gap-libgap-compatible
|
|
pari
|
|
gmp
|
|
gfan
|
|
maxima-ecl
|
|
eclib
|
|
flintqs
|
|
ntl
|
|
ecm
|
|
];
|
|
|
|
# remove python prefix, replace "-" in the name by "_", apply patch_names
|
|
# python2.7-some-pkg-1.0 -> some_pkg-1.0
|
|
pkg_to_spkg_name = pkg: patch_names: let
|
|
parts = lib.splitString "-" pkg.name;
|
|
# remove python2.7-
|
|
stripped_parts = if (builtins.head parts) == python2.libPrefix then builtins.tail parts else parts;
|
|
version = lib.last stripped_parts;
|
|
orig_pkgname = lib.init stripped_parts;
|
|
pkgname = patch_names (lib.concatStringsSep "_" orig_pkgname);
|
|
in pkgname + "-" + version;
|
|
|
|
|
|
# return the names of all dependencies in the transitive closure
|
|
transitiveClosure = dep:
|
|
if isNull dep then
|
|
# propagatedBuildInputs might contain null
|
|
# (although that might be considered a programming error in the derivation)
|
|
[]
|
|
else
|
|
[ dep ] ++ (
|
|
if builtins.hasAttr "propagatedBuildInputs" dep then
|
|
lib.unique (builtins.concatLists (map transitiveClosure dep.propagatedBuildInputs))
|
|
else
|
|
[]
|
|
);
|
|
|
|
allInputs = lib.remove null (buildInputs ++ pythonEnv.extraLibs);
|
|
transitiveDeps = lib.unique (builtins.concatLists (map transitiveClosure allInputs ));
|
|
# fix differences between spkg and sage names
|
|
# (could patch sage instead, but this is more lightweight and also works for packages depending on sage)
|
|
patch_names = builtins.replaceStrings [
|
|
"zope.interface"
|
|
"node_three"
|
|
] [
|
|
"zope_interface"
|
|
"threejs"
|
|
];
|
|
# spkg names (this_is_a_package-version) of all transitive deps
|
|
input_names = map (dep: pkg_to_spkg_name dep patch_names) transitiveDeps;
|
|
in
|
|
stdenv.mkDerivation rec {
|
|
version = sage-src.version;
|
|
name = "sage-with-env-${version}";
|
|
|
|
inherit buildInputs;
|
|
|
|
src = sage-src;
|
|
|
|
configurePhase = "#do nothing";
|
|
|
|
buildPhase = ''
|
|
mkdir installed
|
|
for pkg in ${lib.concatStringsSep " " input_names}; do
|
|
touch "installed/$pkg"
|
|
done
|
|
'';
|
|
|
|
installPhase = ''
|
|
mkdir -p "$out/var/lib/sage"
|
|
cp -r installed $out/var/lib/sage
|
|
|
|
mkdir -p "$out/etc"
|
|
# sage tests will try to create this file if it doesn't exist
|
|
touch "$out/etc/sage-started.txt"
|
|
|
|
mkdir -p "$out/build"
|
|
cp -r src/bin "$out/bin"
|
|
cp -r build/bin "$out/build/bin"
|
|
cp -f '${sage-env}/sage-env' "$out/bin/sage-env"
|
|
substituteInPlace "$out/bin/sage-env" \
|
|
--subst-var-by sage-local "$out"
|
|
'';
|
|
}
|