4a7f99d55d
Part of: https://github.com/NixOS/nixpkgs/issues/108938 meta = with stdenv.lib; is a widely used pattern. We want to slowly remove the `stdenv.lib` indirection and encourage people to use `lib` directly. Thus let’s start with the meta field. This used a rewriting script to mostly automatically replace all occurances of this pattern, and add the `lib` argument to the package header if it doesn’t exist yet. The script in its current form is available at https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
41 lines
1011 B
Nix
41 lines
1011 B
Nix
{ lib, stdenv
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, fetchFromGitHub
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, pkgs
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, mpi ? false
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}:
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stdenv.mkDerivation rec {
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pname = "RAxML";
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version = "8.2.12";
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src = fetchFromGitHub {
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owner = "stamatak";
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repo = "standard-${pname}";
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rev = "v${version}";
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sha256 = "1jqjzhch0rips0vp04prvb8vmc20c5pdmsqn8knadcf91yy859fh";
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};
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buildInputs = stdenv.lib.optionals mpi [ pkgs.openmpi ];
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# TODO darwin, AVX and AVX2 makefile targets
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buildPhase = if mpi then ''
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make -f Makefile.MPI.gcc
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'' else ''
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make -f Makefile.SSE3.PTHREADS.gcc
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'';
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installPhase = if mpi then ''
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mkdir -p $out/bin && cp raxmlHPC-MPI $out/bin
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'' else ''
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mkdir -p $out/bin && cp raxmlHPC-PTHREADS-SSE3 $out/bin
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'';
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meta = with lib; {
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description = "A tool for Phylogenetic Analysis and Post-Analysis of Large Phylogenies";
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license = licenses.gpl3;
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homepage = "https://sco.h-its.org/exelixis/web/software/raxml/";
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maintainers = [ maintainers.unode ];
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platforms = [ "i686-linux" "x86_64-linux" ];
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};
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}
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