nixpkgs/pkgs/applications/science/biology/spades/default.nix
Profpatsch 4a7f99d55d treewide: with stdenv.lib; in meta -> with lib;
Part of: https://github.com/NixOS/nixpkgs/issues/108938

meta = with stdenv.lib;

is a widely used pattern. We want to slowly remove
the `stdenv.lib` indirection and encourage people
to use `lib` directly. Thus let’s start with the meta
field.

This used a rewriting script to mostly automatically
replace all occurances of this pattern, and add the
`lib` argument to the package header if it doesn’t
exist yet.

The script in its current form is available at
https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
2021-01-11 10:38:22 +01:00

28 lines
734 B
Nix

{ lib, stdenv, fetchurl, zlib, bzip2, cmake, python3 }:
stdenv.mkDerivation rec {
pname = "SPAdes";
version = "3.14.1";
src = fetchurl {
url = "http://cab.spbu.ru/files/release${version}/${pname}-${version}.tar.gz";
sha256 = "1ji3afn6yvx7ysg7p9j0d1g28zrnxg1b7x90mhs2bj3lgs7vfafn";
};
nativeBuildInputs = [ cmake ];
buildInputs = [ zlib bzip2 python3 ];
doCheck = true;
sourceRoot = "${pname}-${version}/src";
meta = with lib; {
description = "St. Petersburg genome assembler: assembly toolkit containing various assembly pipelines";
license = licenses.gpl2;
homepage = "http://cab.spbu.ru/software/spades/";
platforms = platforms.unix;
maintainers = [ maintainers.bzizou ];
};
}