4a7f99d55d
Part of: https://github.com/NixOS/nixpkgs/issues/108938 meta = with stdenv.lib; is a widely used pattern. We want to slowly remove the `stdenv.lib` indirection and encourage people to use `lib` directly. Thus let’s start with the meta field. This used a rewriting script to mostly automatically replace all occurances of this pattern, and add the `lib` argument to the package header if it doesn’t exist yet. The script in its current form is available at https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
27 lines
668 B
Nix
27 lines
668 B
Nix
{ lib, stdenv, fetchFromGitHub }:
|
|
|
|
stdenv.mkDerivation rec {
|
|
pname = "samblaster";
|
|
version = "0.1.26";
|
|
|
|
src = fetchFromGitHub {
|
|
owner = "GregoryFaust";
|
|
repo = "samblaster";
|
|
rev = "v.${version}";
|
|
sha256 = "0g24fq5hplnfgqkh3xqpg3lgx3wmxwnh9c7m6yw7pbi40lmgl1jv";
|
|
};
|
|
|
|
installPhase = ''
|
|
mkdir -p $out/bin
|
|
cp samblaster $out/bin
|
|
'';
|
|
|
|
meta = with lib; {
|
|
description = "Tool for marking duplicates and extracting discordant/split reads from SAM/BAM files";
|
|
maintainers = with maintainers; [ jbedo ];
|
|
license = licenses.mit;
|
|
homepage = "https://github.com/GregoryFaust/samblaster";
|
|
platforms = platforms.x86_64;
|
|
};
|
|
}
|