{ stdenv, lib, fetchPypi, python, buildPythonPackage, gfortran, pytest, blas, writeTextFile }: let blasImplementation = lib.nameFromURL blas.name "-"; cfg = writeTextFile { name = "site.cfg"; text = (lib.generators.toINI {} { "${blasImplementation}" = { include_dirs = "${blas}/include"; library_dirs = "${blas}/lib"; } // lib.optionalAttrs (blasImplementation == "mkl") { mkl_libs = "mkl_rt"; lapack_libs = ""; }; }); }; in buildPythonPackage rec { pname = "numpy"; version = "1.16.3"; src = fetchPypi { inherit pname version; extension = "zip"; sha256 = "78a6f89da87eeb48014ec652a65c4ffde370c036d780a995edaeb121d3625621"; }; nativeBuildInputs = [ gfortran pytest ]; buildInputs = [ blas ]; patches = lib.optionals python.hasDistutilsCxxPatch [ # We patch cpython/distutils to fix https://bugs.python.org/issue1222585 # Patching of numpy.distutils is needed to prevent it from undoing the # patch to distutils. ./numpy-distutils-C++.patch ]; preConfigure = '' sed -i 's/-faltivec//' numpy/distutils/system_info.py export NPY_NUM_BUILD_JOBS=$NIX_BUILD_CORES ''; preBuild = '' ln -s ${cfg} site.cfg ''; enableParallelBuilding = true; checkPhase = '' runHook preCheck pushd dist ${python.interpreter} -c 'import numpy; numpy.test("fast", verbose=10)' popd runHook postCheck ''; passthru = { blas = blas; inherit blasImplementation cfg; }; # Disable two tests # - test_f2py: f2py isn't yet on path. # - test_large_file_support: takes a long time and can cause the machine to run out of disk space NOSE_EXCLUDE="test_f2py,test_large_file_support"; meta = { description = "Scientific tools for Python"; homepage = http://numpy.scipy.org/; maintainers = with lib.maintainers; [ fridh ]; }; }