{ lib , fetchPypi , fetchpatch , python , buildPythonPackage , gfortran , hypothesis , pytest , blas , lapack , writeTextFile , cython , setuptoolsBuildHook , pythonOlder }: assert (!blas.isILP64) && (!lapack.isILP64); let cfg = writeTextFile { name = "site.cfg"; text = (lib.generators.toINI {} { ${blas.implementation} = { include_dirs = "${lib.getDev blas}/include:${lib.getDev lapack}/include"; library_dirs = "${blas}/lib:${lapack}/lib"; runtime_library_dirs = "${blas}/lib:${lapack}/lib"; libraries = "lapack,lapacke,blas,cblas"; }; lapack = { include_dirs = "${lib.getDev lapack}/include"; library_dirs = "${lapack}/lib"; runtime_library_dirs = "${lapack}/lib"; }; blas = { include_dirs = "${lib.getDev blas}/include"; library_dirs = "${blas}/lib"; runtime_library_dirs = "${blas}/lib"; }; }); }; in buildPythonPackage rec { pname = "numpy"; # Attention! v1.22.0 breaks scipy and by extension scikit-learn, so # build both to verify they don't break. # https://github.com/scipy/scipy/issues/15414 version = "1.21.5"; format = "pyproject.toml"; disabled = pythonOlder "3.7"; src = fetchPypi { inherit pname version; extension = "zip"; sha256 = "sha256-alkovGJBJk3OXtUJ5m8zZ2/Jf0ZOepGe3GcvtVMiIe4="; }; patches = lib.optionals python.hasDistutilsCxxPatch [ # We patch cpython/distutils to fix https://bugs.python.org/issue1222585 # Patching of numpy.distutils is needed to prevent it from undoing the # patch to distutils. ./numpy-distutils-C++.patch ]; nativeBuildInputs = [ gfortran cython setuptoolsBuildHook ]; buildInputs = [ blas lapack ]; # we default openblas to build with 64 threads # if a machine has more than 64 threads, it will segfault # see https://github.com/xianyi/OpenBLAS/issues/2993 preConfigure = '' sed -i 's/-faltivec//' numpy/distutils/system_info.py export NPY_NUM_BUILD_JOBS=$NIX_BUILD_CORES export OMP_NUM_THREADS=$((NIX_BUILD_CORES > 64 ? 64 : NIX_BUILD_CORES)) ''; preBuild = '' ln -s ${cfg} site.cfg ''; enableParallelBuilding = true; checkInputs = [ pytest hypothesis ]; checkPhase = '' runHook preCheck pushd dist ${python.interpreter} -c 'import numpy; numpy.test("fast", verbose=10)' popd runHook postCheck ''; passthru = { # just for backwards compatibility blas = blas.provider; blasImplementation = blas.implementation; inherit cfg; }; # Disable test # - test_large_file_support: takes a long time and can cause the machine to run out of disk space NOSE_EXCLUDE="test_large_file_support"; meta = { description = "Scientific tools for Python"; homepage = "https://numpy.org/"; license = lib.licenses.bsd3; maintainers = with lib.maintainers; [ fridh ]; }; }