{ stdenv, fetchPypi, isPy27, python, buildPythonPackage , numpy, hdf5, cython, six, pkgconfig, unittest2, fetchpatch , mpi4py ? null, openssh, pytest }: assert hdf5.mpiSupport -> mpi4py != null && hdf5.mpi == mpi4py.mpi; with stdenv.lib; let mpi = hdf5.mpi; mpiSupport = hdf5.mpiSupport; in buildPythonPackage rec { version = "2.10.0"; pname = "h5py"; disabled = isPy27; src = fetchPypi { inherit pname version; sha256 = "84412798925dc870ffd7107f045d7659e60f5d46d1c70c700375248bf6bf512d"; }; configure_flags = "--hdf5=${hdf5}" + optionalString mpiSupport " --mpi"; postConfigure = '' ${python.executable} setup.py configure ${configure_flags} # Needed to run the tests reliably. See: # https://bitbucket.org/mpi4py/mpi4py/issues/87/multiple-test-errors-with-openmpi-30 ${optionalString mpiSupport "export OMPI_MCA_rmaps_base_oversubscribe=yes"} ''; preBuild = if mpiSupport then "export CC=${mpi}/bin/mpicc" else ""; checkInputs = optional isPy27 unittest2 ++ [ pytest openssh ]; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ hdf5 cython ] ++ optional mpiSupport mpi; propagatedBuildInputs = [ numpy six] ++ optionals mpiSupport [ mpi4py openssh ]; meta = { description = "Pythonic interface to the HDF5 binary data format"; homepage = "http://www.h5py.org/"; license = stdenv.lib.licenses.bsd2; }; }