{ lib, stdenv , buildPythonPackage , fetchPypi , python , isPy38 , beautifulsoup4 , bottleneck , cython , dateutil , html5lib , lxml , numexpr , openpyxl , pytz , sqlalchemy , scipy , tables , xlrd , xlwt # Test Inputs , glibcLocales , hypothesis , pytestCheckHook # Darwin inputs , runtimeShell , libcxx ? null }: buildPythonPackage rec { pname = "pandas"; version = "1.1.5"; src = fetchPypi { inherit pname version; sha256 = "06vhk75hmzgv1sfbjzgnsw9x10h7y6bd6s6z7d6lfnn7wcgc83zi"; }; nativeBuildInputs = [ cython ]; buildInputs = lib.optional stdenv.isDarwin libcxx; propagatedBuildInputs = [ beautifulsoup4 bottleneck dateutil html5lib numexpr lxml openpyxl pytz scipy sqlalchemy tables xlrd xlwt ]; checkInputs = [ pytestCheckHook glibcLocales hypothesis ]; # doesn't work with -Werror,-Wunused-command-line-argument # https://github.com/NixOS/nixpkgs/issues/39687 hardeningDisable = lib.optional stdenv.cc.isClang "strictoverflow"; # For OSX, we need to add a dependency on libcxx, which provides # `complex.h` and other libraries that pandas depends on to build. postPatch = lib.optionalString stdenv.isDarwin '' cpp_sdk="${libcxx}/include/c++/v1"; echo "Adding $cpp_sdk to the setup.py common_include variable" substituteInPlace setup.py \ --replace "['pandas/src/klib', 'pandas/src']" \ "['pandas/src/klib', 'pandas/src', '$cpp_sdk']" ''; # Parallel Cythonization is broken in Python 3.8 on Darwin. Fixed in the next # release. https://github.com/pandas-dev/pandas/pull/30862 setupPyBuildFlags = lib.optionals (!(isPy38 && stdenv.isDarwin)) [ # As suggested by # https://pandas.pydata.org/pandas-docs/stable/development/contributing.html#creating-a-python-environment "--parallel=$NIX_BUILD_CORES" ]; doCheck = !stdenv.isAarch64; # upstream doesn't test this architecture pytestFlagsArray = [ "--skip-slow" "--skip-network" ]; disabledTests = [ # since dateutil 0.6.0 the following fails: test_fallback_plural, test_ambiguous_flags, test_ambiguous_compat # was supposed to be solved by https://github.com/dateutil/dateutil/issues/321, but is not the case "test_fallback_plural" "test_ambiguous_flags" "test_ambiguous_compat" # Locale-related "test_names" "test_dt_accessor_datetime_name_accessors" "test_datetime_name_accessors" # Can't import from test folder "test_oo_optimizable" # Disable IO related tests because IO data is no longer distributed "io" # KeyError Timestamp "test_to_excel" # ordering logic has changed "numpy_ufuncs_other" "order_without_freq" # tries to import from pandas.tests post install "util_in_top_level" # Fails with 1.0.5 "test_constructor_list_frames" "test_constructor_with_embedded_frames" # tries to import compiled C extension locally "test_missing_required_dependency" ] ++ lib.optionals stdenv.isDarwin [ "test_locale" "test_clipboard" ]; # tests have relative paths, and need to reference compiled C extensions # so change directory where `import .test` is able to be resolved preCheck = '' cd $out/${python.sitePackages}/pandas export LC_ALL="en_US.UTF-8" PYTHONPATH=$out/${python.sitePackages}:$PYTHONPATH '' # TODO: Get locale and clipboard support working on darwin. # Until then we disable the tests. + lib.optionalString stdenv.isDarwin '' # Fake the impure dependencies pbpaste and pbcopy echo "#!${runtimeShell}" > pbcopy echo "#!${runtimeShell}" > pbpaste chmod a+x pbcopy pbpaste export PATH=$(pwd):$PATH ''; meta = with lib; { # https://github.com/pandas-dev/pandas/issues/14866 # pandas devs are no longer testing i686 so safer to assume it's broken broken = stdenv.isi686; homepage = "https://pandas.pydata.org/"; changelog = "https://pandas.pydata.org/docs/whatsnew/index.html"; description = "Python Data Analysis Library"; license = licenses.bsd3; maintainers = with maintainers; [ raskin fridh knedlsepp ]; platforms = platforms.unix; }; }