nixpkgs

Author	SHA1	Message	Date
Timo Kaufmann	608948e3e9	sage: 8.8.beta2 -> 8.8.beta3	2019-06-27 21:57:33 +02:00
Timo Kaufmann	21c1ab6776	sage: 8.7 -> 8.8.beta2	2019-06-27 21:57:27 +02:00
markuskowa	a07d045b00	Merge pull request #63488 from jbedo/octopus octopus: init 0.6.3-beta	2019-06-27 12:43:25 +02:00
Dmitry Kalinkin	bff22431b5	Merge pull request #62845 from royneary/nim-0.20.0 nim: 0.19.4 -> 0.20.0	2019-06-26 13:00:50 -04:00
Nikolay Amiantov	3dd7d72e43	fast-downward: init at 2019-05-13	2019-06-24 15:59:57 +03:00
Nikolay Amiantov	a92611508f	cplex: add library info	2019-06-24 15:57:22 +03:00
Nikolay Amiantov	10e1475a79	gurobi: add library suffix	2019-06-24 15:57:22 +03:00
R. RyanTM	3e6ef3e9ef	eagle: 9.3.2 -> 9.4.1 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/eagle/versions	2019-06-23 14:57:04 +02:00
royneary	d162165350	mosdepth: 0.2.3 -> 0.2.6	2019-06-22 22:41:59 +02:00
Timo Kaufmann	ac28607a03	Merge pull request #63560 from timokau/sage-threejs-r105 sage: fix threejs r105	2019-06-20 14:55:13 +02:00
markuskowa	3947441cb9	Merge pull request #63262 from r-ryantm/auto-update/gromacs gromacs: 2019.2 -> 2019.3	2019-06-20 14:26:02 +02:00
Timo Kaufmann	9955657209	sage: fix online threejs	2019-06-20 12:50:00 +02:00
Timo Kaufmann	2d78d928cd	sage: backport threejs r100 compatibility https://github.com/NixOS/nixpkgs/issues/62736#issuecomment-503757429	2019-06-20 12:50:00 +02:00
Justin Bedo	b8b71aaaf9	octopus: init 0.6.3-beta	2019-06-19 23:09:33 +10:00
Linus Heckemann	32a992af8b	Merge pull request #63479 from lheckemann/dcm2niix dcm2niix: 1.0.20170130 -> 1.0.20190410	2019-06-19 12:05:37 +02:00
Vincent Laporte	1f2a3a2df2	gappa: 1.2 -> 1.3.5	2019-06-19 09:24:34 +00:00
Linus Heckemann	2458209c3e	dcm2niix: 1.0.20170130 -> 1.0.20190410	2019-06-18 22:12:40 +02:00
Timo Kaufmann	6e74109b13	sage: fix threejs integration (#63375 ) Before this it didn't find the correct files. Unfortunately, the interactive parts of sage are hard to test automatically.	2019-06-18 11:50:41 +02:00
R. RyanTM	3775ef0acd	jmol: 14.29.42 -> 14.29.46 (#63277 ) Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/jmol/versions	2019-06-17 20:56:11 +02:00
Justin Bedo	1be8ba08d3	strelka: 2.9.5 -> 2.9.10	2019-06-17 16:09:25 +10:00
Franz Pletz	394bee72db	ants: fix build with gcc8	2019-06-17 07:26:00 +02:00
R. RyanTM	0c54098340	gromacs: 2019.2 -> 2019.3 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/gromacs/versions	2019-06-16 18:22:05 -07:00
volth	f3282c8d1e	treewide: remove unused variables (#63177 ) * treewide: remove unused variables * making ofborg happy	2019-06-16 19:59:05 +00:00
Bruno Bzeznik	aafffb2614	trimal: init at 1.4.1	2019-06-14 16:31:39 +02:00
Aaron Andersen	4cb64dba39	Merge pull request #58362 from bzizou/cd-hit cd-hit: init at 4.8.1	2019-06-13 20:39:54 -04:00
Bruno Bzeznik	9fbf8625f1	cd-hit: init at 4.8.1	2019-06-13 14:35:13 +02:00
markuskowa	ca099915f7	Merge pull request #62976 from markuskowa/upd-octopus octopus: 8.4 -> 9.0	2019-06-12 09:36:42 +02:00
Markus Kowalewski	4df1e91b31	octopus: 8.4 -> 9.0	2019-06-11 13:02:54 +02:00
Will Dietz	e397f4716c	z3: 4.8.4 -> 4.8.5 * drop included patch * pname-ify	2019-06-10 17:55:26 -07:00
Will Dietz	94774dad00	pulseview: 0.4.0 -> 0.4.1 https://sigrok.org/gitweb/?p=pulseview.git;a=blob;f=NEWS;h=69c7ac5d418bbae896906b8c6b64c6719b1912db;hb=05a4de8abd5810cf8219077259ffa44adb08043e	2019-06-10 23:20:24 +02:00
Robert Scott	48c8756157	pythonPackages.neuron: restrict to x86 platforms	2019-06-09 12:18:58 +02:00
Robert Scott	e0aec554eb	pythonPackages.neuron: fix for darwin un-compensate for some of the darwin quirks the neuron source is expecting	2019-06-09 12:18:58 +02:00
R. RyanTM	5bbc9be100	gmsh: 4.2.3 -> 4.3.0 (#62420 ) * gmsh: 4.2.3 -> 4.3.0 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/gmsh/versions * gmsh: move cmake to nativeBuildInputs	2019-06-07 18:01:57 +02:00
R. RyanTM	8ebf0eefbe	star: 2.7.0f -> 2.7.1a (#62577 ) * star: 2.7.0f -> 2.7.1a Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/star/versions * star: cleanup	2019-06-06 18:10:34 +02:00
Matthew Bauer	d598eca41e	Merge pull request #62752 from matthewbauer/darwin-fixes100 Fixes for x86_64-darwin failures on Hydra	2019-06-06 09:46:41 -04:00
Matthew Bauer	441485af66	iv: only use patchelf on linux	2019-06-05 23:42:58 -04:00
Matthew Bauer	693a4efa4c	Merge pull request #53013 from wucke13/betaflight-configurator-naive betaflight-configurator: init at 10.5.1	2019-06-05 10:08:29 -04:00
worldofpeace	1d66d62bbc	Merge pull request #62430 from r-ryantm/auto-update/gtkwave gtkwave: 3.3.100 -> 3.3.101	2019-06-04 23:12:58 -04:00
Renaud	e7e1ae542c	Merge pull request #62499 from r-ryantm/auto-update/picard-tools picard-tools: 2.19.2 -> 2.20.2	2019-06-05 00:05:59 +02:00
R. RyanTM	df3cdc29be	quantum-espresso: 6.4 -> 6.4.1 (#62556 )	2019-06-04 19:24:04 +00:00
Sébastien Maret	39a3ad3dce	gildas: 20190501_a -> 20190601_b	2019-06-03 21:07:00 +02:00
Nikolay Amiantov	1deb406ac2	mxnet: 1.2.1 -> 1.4.1	2019-06-02 21:50:06 +03:00
Nikolay Amiantov	1260b05279	cntk: 2.4 -> 2.7 Restrict platforms to x86_64-linux.	2019-06-02 19:40:49 +03:00
R. RyanTM	2998ac28b4	picard-tools: 2.19.2 -> 2.20.2 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/picard-tools/versions	2019-06-02 05:31:59 -07:00
markuskowa	5e45835011	Merge pull request #62448 from r-ryantm/auto-update/jmol jmol: 14.29.40 -> 14.29.42	2019-06-02 11:46:45 +02:00
R. RyanTM	e20c69619f	jmol: 14.29.40 -> 14.29.42 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/jmol/versions	2019-06-01 17:19:25 -07:00
R. RyanTM	62e667f6ab	gtkwave: 3.3.100 -> 3.3.101 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/gtkwave/versions	2019-06-01 13:31:03 -07:00
worldofpeace	b33513d237	Merge pull request #62378 from r-ryantm/auto-update/clp clp: 1.17.1 -> 1.17.2	2019-06-01 12:10:36 -04:00
worldofpeace	62c68b8a72	clp: update homepage	2019-06-01 12:08:20 -04:00
R. RyanTM	6f2d2818b0	cryptoverif: 2.00 -> 2.01 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/cryptoverif/versions	2019-06-01 10:51:25 -05:00
Alyssa Ross	062210bdff	treewide: update cargoSha256 hashes for cargo-vendor upgrade A recent upgrade of cargo-vendor changed its output slightly, which broke all cargoSha256 hashes in nixpkgs. See https://github.com/NixOS/nixpkgs/issues/60668 for more information. Since then, a few hashes have been fixed in master by hand, but there were a lot still to do, so I did all of the ones left over with some scripts I wrote. The one hash I wasn’t able to update was habitat's, because it’s currently broken and the build doesn’t get far enough to produce a hash anyway.	2019-06-01 15:17:52 +00:00
R. RyanTM	332c600f7d	clp: 1.17.1 -> 1.17.2 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/clp/versions	2019-06-01 04:05:51 -07:00
wucke13	fd121cdd88	Added makeWrapper suggestion	2019-05-31 12:51:51 +02:00
wucke13	db3a1d8adb	Update pkgs/applications/science/robotics/betaflight-configurator/default.nix Co-Authored-By: Paul TREHIOU <paul@nyanlout.re>	2019-05-31 12:51:51 +02:00
wucke13	5fcf9f5559	Update pkgs/applications/science/robotics/betaflight-configurator/default.nix Co-Authored-By: Paul TREHIOU <paul@nyanlout.re>	2019-05-31 12:51:51 +02:00
wucke13	170009b123	betaflight-configurator: init at 10.5.1	2019-05-31 12:51:51 +02:00
Vincent Laporte	57c3da07eb	coq_8_9: 8.9.0 -> 8.9.1	2019-05-29 11:24:45 +02:00
Will Dietz	368f870219	libqalculate,qalculate-gtk: 3.1.0 -> 3.2.0	2019-05-28 19:14:03 -05:00
Jörg Thalheim	10ddd34921	verilator: 4.012 -> 4.014 (#62013 ) verilator: 4.012 -> 4.014	2019-05-25 09:16:58 +01:00
Dmitry Kalinkin	785204f5a1	Merge pull request #61895 from smaret/gildas-update gildas: 20190401_a -> 20190501_a	2019-05-24 17:48:25 -04:00
R. RyanTM	66b4fd678c	verilator: 4.012 -> 4.014 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/verilator/versions	2019-05-24 09:19:04 -07:00
Renaud	70a494a486	Merge pull request #61798 from bobvanderlinden/aliza-1.48.10 aliza: 1.36.3 -> 1.48.10	2019-05-24 17:23:51 +02:00
Ryan Mulligan	34e8f3b119	Merge pull request #61997 from r-ryantm/auto-update/stacks stacks: 2.3e -> 2.4	2019-05-24 06:31:43 -07:00
R. RyanTM	f4a20199d2	stacks: 2.3e -> 2.4 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/stacks/versions	2019-05-24 03:50:06 -07:00
Sébastien Maret	cadd88967f	gildas: 20190401_a -> 20190501_a	2019-05-24 08:11:21 +02:00
Gabriel Ebner	cca0aeeb68	spyder: convert to python modules	2019-05-21 18:23:07 +02:00
Bob van der Linden	c8571f6a2c	aliza: ? -> 1.48.10	2019-05-21 11:31:38 +02:00
Cyril Cohen	d16a78b512	several fixes in coq and coqPackages.mathcomp (and extras)	2019-05-21 08:55:38 +02:00
markuskowa	82ea400e46	Merge pull request #61630 from markuskowa/upd-molden molden: 5.9.5 -> 6.1	2019-05-18 20:13:57 +02:00
Robin Gloster	43aa2e30c3	Merge pull request #58369 from bzizou/clustalo clustal-omega: init at 1.2.4	2019-05-18 10:16:43 +00:00
Robin Gloster	6cf583cf2f	Merge pull request #60406 from JohnAZoidberg/remove-isnull treewide: Remove usage of isNull	2019-05-18 09:36:24 +00:00
Markus Kowalewski	dce18eefd1	molden: 5.9.5 -> 6.1	2019-05-17 13:07:53 +02:00
Aaron Andersen	8b3350cf15	Merge pull request #61462 from mpoquet/simgrid-3.21-to-3.22.2 simgrid: 3.21 -> 3.22.2	2019-05-16 12:04:44 -04:00
Will Dietz	51202e96fa	nasc: 0.5.2 -> 0.5.4 https://github.com/parnold-x/nasc/releases/tag/0.5.4 https://github.com/parnold-x/nasc/releases/tag/0.5.3	2019-05-15 16:59:26 -05:00
Millian Poquet	13aa449bab	simgrid: remove unneeded 'name' definition	2019-05-15 12:35:12 +02:00
Vincent Laporte	b72daf7117	coq: init at 8.10+β1	2019-05-15 10:30:03 +02:00
Vincent Laporte	1ce94fad33	coq: make “coq-version” more general	2019-05-15 10:30:03 +02:00
Millian Poquet	00fc5bd08f	simgrid: override checkPhase -> preCheck This commit changes how failing tests are ignored. - Previously, the whole checkPhase was overridden. - Now, preCheck generates a ctest ignore file. ctest doc: https://gitlab.kitware.com/cmake/community/wikis/doc/ctest/Testing-With-CTest#customizing-ctest	2019-05-14 18:27:51 +02:00
Millian Poquet	aa29b79e8a	simgrid: fetchgit -> fetchFromGitLab	2019-05-13 21:26:09 +02:00
Millian Poquet	c7ab2b9499	simgrid: 3.21 -> 3.22.2 - GitHub -> Framagit (SimGrid main repo has moved) - Test binaries must now be explicitly compiled (`make tests`) - Fix broken documentation link	2019-05-13 18:58:27 +02:00
Timo Kaufmann	ecfc35e9a6	pynac: 0.7.24 -> 0.7.25 (#61458 )	2019-05-13 17:11:13 +02:00
Renaud	bf4728cb40	eggnog-mapper: fix patch URL and hash	2019-05-13 16:00:07 +02:00
R. RyanTM	af6a39460a	cbc: 2.9.9 -> 2.10.2 (#58016 ) * cbc: 2.9.9 -> 2.10.0 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/cbc/versions * cbc: 2.10.0 -> 2.10.2 + mark as broken on aarch64 (fails to build)	2019-05-12 23:46:18 +02:00
Sebastien Bourdeauducq	992150d37b	symbiyosys: fix path to bash	2019-05-12 20:00:10 +02:00
Renaud	d081baa4a5	Merge pull request #61335 from r-ryantm/auto-update/minimap2 minimap2: 2.16 -> 2.17	2019-05-12 17:27:28 +02:00
R. RyanTM	ad5676f8b9	minimap2: 2.16 -> 2.17 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/minimap2/versions	2019-05-11 21:12:42 -07:00
wucke13	a670a8dbb1	apmplanner-2: 2.0.26 -> 2.0.27-rc1	2019-05-11 19:15:10 +02:00
Timo Kaufmann	3814d7b14a	givaro: 4.0.4 -> 4.1.0, fflas-ffpack: 2.3.2 -> 2.4.0, linbox: 1.5.2 -> 1.6.0 (#61285 ) The three packages are interdependent and need to be updated together, like the main contributor did for sage: https://trac.sagemath.org/ticket/24214	2019-05-11 16:09:07 +02:00
Michael Raskin	7252364dfa	tptp: switch to new base URL for source tarball	2019-05-09 22:57:59 +02:00
Michael Raskin	a8c4b37063	vampire: switch off the fragile fetchSubmodules/leaveDotGit	2019-05-09 22:57:59 +02:00
Renaud	2fb1b3156f	Merge pull request #60932 from c0bw3b/patches-cleanup [treewide] delete (some) unused patches	2019-05-07 23:34:04 +02:00
Frederik Rietdijk	a80982b4c9	Merge staging-next into master	2019-05-07 19:29:06 +02:00
Frederik Rietdijk	0196d8f11c	Merge master into staging-next	2019-05-07 09:00:06 +02:00
Mario Rodas	e47dd1bb34	cedille: fix hash	2019-05-05 20:47:29 -05:00
Michael Raskin	7770495cd7	Merge pull request #59148 from volth/gcc.arch.v3 compilation for particular x86_64 architecture	2019-05-05 19:12:12 +00:00
Daniël de Kok	f029f8c5ad	fasttext: init at 0.2.0	2019-05-05 08:28:44 +02:00
c0bw3b	9cb260d091	[treewide] delete unused patches	2019-05-04 19:52:24 +02:00
Frederik Rietdijk	155c9d8e18	Merge master into staging-next	2019-05-02 08:43:14 +02:00
Renaud	2f76c9b7e8	Merge pull request #60694 from r-ryantm/auto-update/picard-tools picard-tools: 2.19.0 -> 2.19.2	2019-05-02 08:06:35 +02:00
R. RyanTM	d41da19c65	picard-tools: 2.19.0 -> 2.19.2 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/picard-tools/versions	2019-05-01 17:49:08 -07:00
Gabriel Ebner	ebbeae56bd	kicad: 5.0.2 -> 5.1.2 (#60611 ) kicad: 5.0.2 -> 5.1.2	2019-05-01 12:21:02 +02:00
Frederik Rietdijk	f137783927	Merge master into staging-next	2019-05-01 11:45:46 +02:00
R. RyanTM	cc82f81d9a	bowtie2: 2.3.5 -> 2.3.5.1 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/bowtie2/versions	2019-05-01 11:17:16 +02:00
R. RyanTM	dbfdaf048a	gromacs: 2019.1 -> 2019.2 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/gromacs/versions	2019-05-01 11:14:16 +02:00
Gabriel Ebner	9370c1afdb	kicad: 5.0.2 -> 5.1.2	2019-05-01 11:13:14 +02:00
R. RyanTM	06aa3d6f60	jmol: 14.29.36 -> 14.29.40 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/jmol/versions	2019-05-01 11:10:18 +02:00
Gabriel Ebner	e62576817f	Merge branch 'auto-update/libqalculate'	2019-05-01 10:28:38 +02:00
Gabriel Ebner	1d5a0ffbfc	qalculate-gtk: 3.0.0 -> 3.1.0	2019-05-01 10:28:04 +02:00
Ryan Mulligan	14965968bd	Merge pull request #60550 from r-ryantm/auto-update/ginac ginac: 1.7.5 -> 1.7.6	2019-04-30 19:27:22 -07:00
R. RyanTM	1d663a6b2e	ginac: 1.7.5 -> 1.7.6 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/ginac/versions	2019-04-30 15:56:23 -07:00
Michael Raskin	9d807a768a	Merge pull request #60520 from r-ryantm/auto-update/eprover eprover: 2.2 -> 2.3	2019-04-30 19:16:59 +00:00
R. RyanTM	62cd9ccca4	eprover: 2.2 -> 2.3 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/eprover/versions	2019-04-30 10:05:27 -07:00
Gabriel Ebner	a35df16d5f	kicad: fix #49089 by adding libraries files (#57452 ) kicad: fix #49089 by adding libraries files	2019-04-30 17:38:16 +02:00
volth	5ad79dc4bb	compilation for particular x86_64 architecture	2019-04-30 14:28:04 +00:00
Matthew Bauer	a3990c9f6d	Merge pull request #60447 from matthewbauer/macos-10-12-fixups Fixup from macos-10-12 branch	2019-04-30 10:06:45 -04:00
Frederik Rietdijk	3462fe27d9	Merge staging-next into staging	2019-04-30 15:52:19 +02:00
Matthew Bauer	74c784a79c	treewide: make -Wno-error flags clang-only In `724e833ea2`, I was a little too aggressive in enabling these flags. Many don’t work in gcc, and we should probably avoid settings them widely. This makes those flags optional on isclang	2019-04-29 21:34:24 -04:00
Mario Rodas	7a965dcdab	cedille: 1.0.0 -> 1.1.1 (#60307 )	2019-04-29 21:02:44 +02:00
Daniel Schaefer	786f02f7a4	treewide: Remove usage of isNull isNull "is deprecated; just write e == null instead" says the Nix manual	2019-04-29 14:05:50 +02:00
Timo Kaufmann	6dabc28cd0	sage: add compatibility for R 3.6.0 The random number generator seems to have changed. Because of this, a trivial test adjustment is needed.	2019-04-29 13:37:07 +02:00
Alex Branham	4264ad4c2b	R: 3.5.3 -> 3.6.0 The patch is necessary for the test suite to pass without errors. The fix has already been made upstream but didn't make it into the 3.6.0 release. Closes https://github.com/NixOS/nixpkgs/pull/60273.	2019-04-29 13:35:21 +02:00
Bruno Bzeznik	83886b3d91	aragorn: init at 1.2.38 (#58354 )	2019-04-29 07:18:03 -04:00
Ben	535c38dd73	GeoGebra: 472 -> 535 (#60272 ) * Update GeoGebra * Update default.nix	2019-04-29 11:25:37 +02:00
Timo Kaufmann	31709b611f	R: add timokau as a maintainer I'm interested in R as a dependency for sage. R changes are likely to impact sage, so I'd like to get notified on those changes.	2019-04-28 13:20:47 +02:00
Matthew Bauer	87944c3125	Merge pull request #56744 from matthewbauer/macos-10-12 Update macOS to 10.12	2019-04-26 22:20:03 -04:00
Matthew Bauer	724e833ea2	treewide: disable -Werror for llvm 7 Some of these have errors on newest llvm. It’s easiest to just add -Wno-error in these cases.	2019-04-26 21:55:04 -04:00
Renaud	5560607988	Merge pull request #59484 from r-ryantm/auto-update/eagle eagle: 9.3.1 -> 9.3.2	2019-04-25 23:32:25 +02:00
Renaud	71c6157fd7	Merge pull request #58534 from bzizou/sumatools.dev sumatools: init at 1.0.34	2019-04-24 22:34:35 +02:00
Renaud	9f26d537e8	Merge pull request #59516 from r-ryantm/auto-update/gmsh gmsh: 4.2.2 -> 4.2.3	2019-04-24 20:40:56 +02:00
worldofpeace	c8c0bd1fea	Merge pull request #51285 from expipiplus1/fped fped: init at unstable-2017-05-11	2019-04-23 06:52:50 -04:00
markuskowa	d0e70ac2d3	Merge pull request #60010 from JohnAZoidberg/https-urls HTTPS urls	2019-04-22 23:37:07 +02:00
Austin Seipp	b0fea1dc9c	verilog: 2018.12.15 -> 2019.03.27, parallel build Signed-off-by: Austin Seipp <aseipp@pobox.com>	2019-04-22 14:27:45 -05:00
Austin Seipp	fe8eb566b5	symbiyosys: 2019.03.28 -> 2019.04.18 Signed-off-by: Austin Seipp <aseipp@pobox.com>	2019-04-22 14:27:45 -05:00
Daniel Schaefer	bac4d95aa2	treewide: Change URLs to HTTPS Lots of URLs were HTTP redirect to HTTPS. Changed those and checked them if there's actual content. Inspired by https://github.com/NixOS/nixpkgs/issues/60004	2019-04-22 10:19:54 +02:00
Timo Kaufmann	512097dece	Merge pull request #59921 from timokau/gap-update gap: 4.10.0 -> 4.10.1	2019-04-20 13:17:04 +02:00
R. RyanTM	0dc3184871	picard-tools: 2.18.27 -> 2.19.0 (#59634 ) Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/picard-tools/versions	2019-04-20 13:15:40 +02:00
Timo Kaufmann	9c7f774a39	gap: mark as broken on darwin Has been failing to build for a while.	2019-04-20 12:36:11 +02:00
Timo Kaufmann	af6739fdd7	gap: 4.10.0 -> 4.10.1	2019-04-20 09:54:27 +02:00
Aaron Andersen	77dbfa3a55	Merge pull request #53803 from jfrankenau/init-groove groove: init at 5.7.4	2019-04-19 20:27:18 -04:00
Aaron Andersen	11cf1a282d	Merge pull request #58377 from bzizou/exonerate exonerate: init at 2.4.0	2019-04-19 13:25:49 -04:00
Mario Rodas	f84a7b3828	Merge pull request #59834 from luispedro/add_prodigal Prodigal: init at 2.6.3	2019-04-19 09:50:03 -05:00
Bruno Bzeznik	6a8c9bff8f	exonerate: init at 2.4.0	2019-04-19 14:58:57 +02:00
Bruno Bzeznik	90b4796c60	sumatools: init at 1.0.34	2019-04-19 14:43:40 +02:00
Johannes Frankenau	e7f021ca93	groove: init at 5.7.4	2019-04-19 13:34:30 +02:00
Luis Pedro Coelho	3fc55eec05	Prodigal: init at 2.6.3	2019-04-19 08:38:14 +02:00
Timo Kaufmann	49b8efcb84	sage: 8.6 -> 8.7 https://groups.google.com/forum/#!topic/sage-release/3m8PV9JkFro	2019-04-17 22:44:32 +02:00
Timo Kaufmann	e0e5445667	sage: fix another transient sig_on bug Caused a test failure on hydra, backporting upstream fix.	2019-04-17 19:58:07 +02:00
R. RyanTM	d11731130d	star: 2.7.0c -> 2.7.0f Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/star/versions	2019-04-16 18:30:49 +02:00
Michael Raskin	3d3a415f24	petrinizer: init at 0.9.1.1	2019-04-16 15:11:03 +02:00
Austin Seipp	bb27856a5c	Merge pull request #59522 from r-ryantm/auto-update/gtkwave gtkwave: 3.3.99 -> 3.3.100	2019-04-16 02:12:25 -05:00
Matthew Bauer	f475aeaf29	Merge pull request #59535 from matthewbauer/homepage-fixes treewide: update homepages to https where available	2019-04-15 20:47:30 -04:00
Matthew Bauer	290a5d916e	treewide: update homepages to https where available Based on "problems" from repology: https://repology.org/repository/nix_unstable/problems Mostly simple changes to reflect redirects.	2019-04-15 10:10:05 -04:00
R. RyanTM	c906798997	jmol: 14.29.32 -> 14.29.36 (#59546 ) Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/jmol/versions	2019-04-15 12:02:41 +02:00
Austin Seipp	a5add1e623	symbiyosys: 2018.12.09 -> 2019.03.28 Signed-off-by: Austin Seipp <aseipp@pobox.com>	2019-04-15 00:17:54 -05:00
Luis Pedro Coelho	13a1f2c296	eggnog-mapper: init at 1.0.3 (#58905 )	2019-04-14 17:22:47 -07:00
R. RyanTM	8a4ad20ed0	gtkwave: 3.3.99 -> 3.3.100 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/gtkwave/versions	2019-04-14 14:47:32 -07:00
R. RyanTM	00d17e36ea	gmsh: 4.2.2 -> 4.2.3 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/gmsh/versions	2019-04-14 13:15:32 -07:00
Timo Kaufmann	62c288ec20	python.pkgs.sympy: 1.3 -> 1.4 (#59482 )	2019-04-14 17:52:03 +02:00
Michael Raskin	796050fedd	openmvs: mark as broken	2019-04-14 17:45:21 +02:00
R. RyanTM	c3a9b4e1fd	eagle: 9.3.1 -> 9.3.2 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/eagle/versions	2019-04-14 07:47:26 -07:00
markuskowa	87f595a1f0	Merge pull request #56615 from r-ryantm/auto-update/clp clp: 1.16.11 -> 1.17.0	2019-04-14 12:05:32 +02:00
Markus Kowalewski	19dfffff3c	clp: restrict to x86_64-linux + darwin	2019-04-14 00:17:25 +02:00
Markus Kowalewski	e879991e1b	clp: 1.17.0 -> 1.17.11	2019-04-14 00:04:06 +02:00
Joe Hermaszewski	0e2d27f5af	fped: init at 2017-05-11	2019-04-13 13:36:46 +08:00
Julien Dehos	a13f5d0da1	mxnet: fix cuda support enabled build (#48781 )	2019-04-12 10:31:22 +00:00
Frederik Rietdijk	993e2b4ec2	Merge pull request #59098 from NixOS/staging-next Staging next	2019-04-11 18:23:14 +02:00
Frederik Rietdijk	230c67f43b	Merge master into staging-next	2019-04-11 07:50:23 +02:00
Dmitry Kalinkin	c321b64b3f	snakemake: 5.2.2 -> 5.4.4	2019-04-10 14:18:26 -04:00
xeji	cc118b4426	Merge pull request #58676 from smaret/gildas-update gildas: update to 20190401_a	2019-04-10 14:30:50 +02:00
Frederik Rietdijk	d108b49168	Merge master into staging-next	2019-04-09 16:38:35 +02:00
Vladimír Čunát	f7ddff5c6d	R: fix regression from commit `cbade453` #58989 Normally the directory is created in fixup phase.	2019-04-07 17:38:45 +02:00
Frederik Rietdijk	7f7da0a16f	Merge master into staging-next	2019-04-07 15:14:52 +02:00
rhokue	cbade453ac	R: explicitly declare `which` as a run-time dependency Fixes https://github.com/NixOS/nixpkgs/issues/58963. Closes https://github.com/NixOS/nixpkgs/pull/58989.	2019-04-07 11:12:43 +02:00
Frederik Rietdijk	4a125f6b20	Merge master into staging-next	2019-04-07 08:33:41 +02:00
Timo Kaufmann	ceede33ddf	python.pkgs.cypari2: 2.0.3 -> 2.1.0 (#59085 )	2019-04-06 21:46:13 +00:00
Pascal Wittmann	cfb6ade58c	Merge pull request #58931 from bzizou/migrate migrate: init at 3.7.2	2019-04-06 14:23:50 +02:00
Vincent Laporte	50a03f8632	hol_light: 2018-09-30 -> 2019-03-27	2019-04-06 11:03:29 +02:00
Timo Kaufmann	6662fbc822	Merge pull request #58961 from timokau/nauty-features nauty: disable cpu feature detection	2019-04-05 13:12:05 +00:00
Jan Tojnar	cb1a20499a	Merge branch 'master' into staging	2019-04-05 11:37:15 +02:00
Bruno Bzeznik	0b03f44c2f	migrate: init at 3.7.2	2019-04-05 09:01:36 +02:00
Timo Kaufmann	7f22a42976	nauty: disable cpu feature detection	2019-04-04 14:54:55 +02:00
Timo Kaufmann	15045e6233	nauty: add timokau as a maintainer I'm interested in this package as a sage dependency.	2019-04-04 14:54:31 +02:00
Timo Kaufmann	5880c449dd	nauty: small refactoring	2019-04-04 14:54:05 +02:00
R. RyanTM	9f68f2a7dc	verilator: 4.010 -> 4.012 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/verilator/versions	2019-04-03 13:43:11 -05:00
markuskowa	e2ce5fd7fe	Merge pull request #58860 from r-ryantm/auto-update/quantum-espresso quantum-espresso: 6.3 -> 6.4	2019-04-03 15:42:40 +02:00
Markus Kowalewski	c109aaa5cb	quantum-espresso: remove outdated makefile fix	2019-04-03 15:00:17 +02:00
markuskowa	126e1f8fd0	Merge pull request #58538 from bzizou/stacks stacks: init at 2.3e	2019-04-03 14:41:00 +02:00
Bruno Bzeznik	e7899d2a00	stacks: init at 2.3e	2019-04-03 14:01:32 +02:00
R. RyanTM	882247fc3f	quantum-espresso: 6.3 -> 6.4 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/quantum-espresso/versions	2019-04-02 15:30:36 -07:00
Timo Kaufmann	69555825f8	eclib: 20180815 -> 20190226 (#58801 ) Needs a sage patch, see https://trac.sagemath.org/ticket/27360.	2019-04-02 15:39:20 +00:00
Sébastien Maret	806a3fa2e6	gildas: 20190301_b -> 20190401_a	2019-04-02 09:04:39 +02:00
R. RyanTM	5f4e5553bc	jmol: 14.29.31 -> 14.29.32 (#58698 ) Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/jmol/versions	2019-04-01 20:12:53 +00:00
John Ericson	4ccb74011f	Merge commit '18aa59b0f26fc707e7313f8467e67159e61600c2' from master into staging There was one conflict in the NixOS manual; I checked that it still built after resolving it.	2019-04-01 00:40:03 -04:00
markuskowa	c637aeff19	Merge pull request #58541 from luispedro/add_megahit megahit: init at 1.1.4	2019-03-31 12:51:59 +02:00
Luis Pedro Coelho	bf48451959	megahit: init at 1.1.4 This is widely used in bioinformatics for assembling genomes & metagenomes	2019-03-31 05:56:14 +02:00
Dmitry Kalinkin	ea757ac59f	Merge pull request #58108 from veprbl/pr/root5_fix root5: fix build	2019-03-30 22:36:23 -04:00
R. RyanTM	893abe12e8	bowtie2: 2.3.4.3 -> 2.3.5 (#58014 ) Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/bowtie2/versions	2019-03-31 00:37:38 +01:00
Silvan Mosberger	aadb1cbe26	Merge pull request #58494 from markuskowa/upd-octopus octopus: 8.3 -> 8.4	2019-03-29 20:43:28 +01:00
markuskowa	7701fd7603	Merge pull request #58097 from r-ryantm/auto-update/ginac ginac: 1.7.4 -> 1.7.5	2019-03-29 20:27:39 +01:00
Silvan Mosberger	030b845413	Merge pull request #58492 from markuskowa/upd-molden molden: 5.9.3 -> 5.9.5	2019-03-29 20:16:08 +01:00
geistesk	5e6273df68	stellarium: 0.18.3 -> 0.19.0	2019-03-28 21:21:54 +01:00
markuskowa	403aa2dfed	Merge pull request #58180 from luzpaz/gmsh4.2.2 gmsh 4.2.1->4.2.2	2019-03-28 18:11:58 +01:00
Markus Kowalewski	3c19324e2a	octopus: 8.3 -> 8.4	2019-03-28 18:00:41 +01:00
Markus Kowalewski	6ea9c0243b	molden: 5.9.3 -> 5.9.5	2019-03-28 17:39:15 +01:00
R. RyanTM	2ce544a8b1	minimap2: 2.15 -> 2.16 (#57319 ) Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/minimap2/versions	2019-03-27 23:25:52 +01:00
R. RyanTM	1b73fd1954	paml: 4.9h -> 4.9i (#57354 ) Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/paml/versions	2019-03-27 15:44:21 +01:00
Bruno Bzeznik	00431493c0	itsx: init at 1.1.1	2019-03-26 15:52:35 +01:00
Bruno Bzeznik	6858d0fd62	clustal-omega: init at 1.2.4	2019-03-26 15:45:59 +01:00
Joachim F	c9cd1356ea	Merge pull request #56522 from bzizou/messer-slim messer-slim: init at 3.2.1	2019-03-26 00:42:58 +00:00
Dmitry Kalinkin	9ba406ff1c	kicad: replace with3DPackages option with an override	2019-03-24 01:37:47 -04:00
Dmitry Kalinkin	d0fc807347	kicad: make module list overridable This moves module definition into passthru. Otherwise building kicad would still require all modules to be built first even if they are not used. Also this drops preferLocalBuild from packages3d. hydraPlatforms should do what we need to. preferLocalBuild would addtitionaly disable remote builders, which is probably not what we want.	2019-03-24 01:37:46 -04:00
Gabriel Ebner	4446452347	Merge pull request #58163 from dtzWill/update/qalculate-3 libqalculate,qalculate-gtk: 2.9.0 -> 3.0.0	2019-03-23 18:50:24 +01:00
luz.paz	13158c692c	gmsh 4.2.1->4.2.2	2019-03-23 12:51:12 -04:00
markuskowa	b10799905c	Merge pull request #58162 from r-ryantm/auto-update/gromacs gromacs: 2019 -> 2019.1	2019-03-23 12:29:48 +01:00
Frederik Rietdijk	23e431387b	Merge staging-next into staging	2019-03-23 09:20:09 +01:00
Will Dietz	24484b216a	qalculate-gtk: 2.9.0 -> 3.0.0 http://qalculate.github.io/news.html	2019-03-23 01:09:17 -05:00
R. RyanTM	c70807aa13	gromacs: 2019 -> 2019.1 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/gromacs/versions	2019-03-22 22:05:26 -07:00
Gabriel Ebner	11318d1ba2	elan: 0.7.4 -> 0.7.5	2019-03-22 11:16:44 +01:00
Jörg Thalheim	70d6db9097	Merge pull request #58065 from r-ryantm/auto-update/eagle eagle: 9.1.2 -> 9.3.1	2019-03-22 07:22:58 +00:00
Wael M. Nasreddine	5af0780492	Merge remote-tracking branch 'origin/master' into staging * origin/master: (693 commits) buildGoModule: use go_1_12 instead of go_1_11 (#58103) gitAndTools.lab: 0.15.2 -> 0.15.3 (#58091) signal-desktop: 1.22.0 -> 1.23.0 added missing semicolon to documentation terminus_font_ttf: 4.46.0 -> 4.47.0 buildGoModule: remove SSL env vars in favor of cacert in buildInputs (#58071) dav1d: init at 0.2.1 dropbox-cli: 2018.11.28 -> 2019.02.14 atlassian-confluence: 6.14.1 -> 6.14.2 maintainers: update email for dywedir python.pkgs.hglib: use patch to specify hg path (#57926) chkrootkit: 0.52 -> 0.53 radare2-cutter: 1.7.2 -> 1.8.0 autorandr: 1.7 -> 1.8 pythonPackages.pyhepmc: fix build llvm-polly/clang-polly: use latest llvm apulse: 0.1.11.1 -> 0.1.12, cleanup factorio: experimental 0.17.14 → 0.17.16 (#58000) sequeler: 0.6.7 -> 0.6.8 nasc: 0.5.1 -> 0.5.2 ...	2019-03-21 21:01:25 -07:00
R. RyanTM	34cba0b001	ginac: 1.7.4 -> 1.7.5 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/ginac/versions	2019-03-21 17:54:31 -07:00
R. RyanTM	6c14a2f3f8	eagle: 9.1.2 -> 9.3.1 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/eagle/versions	2019-03-21 10:40:06 -07:00
worldofpeace	0353967957	nasc: 0.5.1 -> 0.5.2 Main improvment is that libqalculatenasc.so is now properly linked Changelog: https://github.com/parnold-x/nasc/compare/0.5.1...0.5.2	2019-03-20 23:10:33 -04:00
Gabriel Ebner	52c3ee6c4d	elan: 0.7.2 -> 0.7.4	2019-03-20 13:33:24 +01:00
Dmitry Kalinkin	c36f841ec7	root5: fix build	2019-03-20 00:26:13 -04:00
Timo Kaufmann	5fc5881221	sage: backport bugfix (#57794 )	2019-03-17 14:36:01 +00:00
Timo Kaufmann	8fc3c033cb	pynac: 0.7.23 -> 0.7.24 (#57791 ) Apparently some python3 related fixes: https://trac.sagemath.org/ticket/27241 Also switch to using pname.	2019-03-17 14:35:28 +00:00
Stephen	a14a7d958f	labelimg: fix build (#57714 ) for #56826 see https://hydra.nixos.org/build/90477186/nixlog/2	2019-03-15 20:50:03 +01:00
Thibaut Marty	2f5439a950	kicad: fix #49089 by adding libraries files This splits the KiCad package in several derivations: - original package (main KiCad package) - internationalization package - templates - schematic symbols libraries - PCB footprints libraries - 3D models libraries From these derivations, 2 packages are exposed in top level: - `kicad` (main KiCad package + all libraries except 3D models) - `kicad-with-3dpackages` (kicad + all libraries) The 3D models can also be installed separately with `kicad.packages3d`. This prevents a new compilation of KiCad, but the user must set the `KISYS3DMOD` environment variable or option accordingly.	2019-03-14 21:07:38 +01:00
Dmitry Kalinkin	d5f97ae600	Merge pull request #57650 from stephengroat/patch-4 apmplanner2: fix build	2019-03-14 15:28:57 -04:00
Alex Branham	1e354a7e40	R: 3.5.2 -> 3.5.3 Closes https://github.com/NixOS/nixpkgs/pull/57400.	2019-03-14 19:50:37 +01:00
Stephen	08e4d7cf69	apmplanner2: fix build see ArduPilot/apm_planner#1166	2019-03-14 11:23:20 -07:00
Gabriel Ebner	be261a1ede	isabelle: refactor Fixes #33337	2019-03-14 11:48:30 +01:00
Gabriel Ebner	308456a7a7	Merge pull request #57567 from gebner/isabelle-2018 isabelle: 2017 -> 2018	2019-03-14 11:25:02 +01:00
Gabriel Ebner	c7f43de43c	isabelle: 2017 -> 2018	2019-03-12 14:32:48 +01:00
Sébastien Maret	6f81adb7ee	gildas: 20190301_a -> 20190301_b	2019-03-11 21:43:41 +01:00
Matthew Bauer	37eba81c7b	Merge pull request #56391 from matthewbauer/cmake-treewide Add more CMake flags	2019-03-11 12:43:46 -04:00
Matthew Bauer	6ed49262f5	treewide: remove BUILD_TESTING flag This is now set by CMake	2019-03-11 10:11:28 -04:00
worldofpeace	988ed26778	Merge pull request #57363 from r-ryantm/auto-update/picard-tools picard-tools: 2.18.25 -> 2.18.27	2019-03-11 07:13:20 -04:00
R. RyanTM	70815de29c	picard-tools: 2.18.25 -> 2.18.27 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/picard-tools/versions	2019-03-11 03:37:34 -07:00
Peter Hoeg	136126ceae	Merge pull request #56498 from ariutta/patch-1 cytoscape: bump 3.6.1 -> 3.7.1	2019-03-11 11:20:50 +08:00
Timo Kaufmann	ce96994032	sage: fix docbuild (#57294 ) The docbuild (or rather its tests) failed because sphinx built some English parts of the documentation in Russian. The added debian patch fixes that by isolating docbuilding threads in sphinx using proper subprocesses.	2019-03-10 21:42:54 +00:00
Timo Kaufmann	3b7fb15182	Merge pull request #57126 from timokau/sage-maxima-downgrade sage: downgrade maxima to 5.41	2019-03-09 20:05:01 +00:00
Timo Kaufmann	23908a0ee3	sage: downgrade maxima to 5.41 See discussion at `82254747af`.	2019-03-09 17:23:57 +01:00
Silvan Mosberger	8ca1c925c6	sad: Fix build	2019-03-09 01:07:18 +01:00
luz.paz	77cb537712	gmsh: 4.1.5 -> 4.2.1	2019-03-08 05:24:15 -05:00
Timo Kaufmann	e2b287b32a	maxima: remove ecl known-failures patch It doesn't apply anymore since the recent update. Since the testsuite is completely disabled now, there is little point in rebasing it.	2019-03-07 16:08:10 +01:00
Ryan Mulligan	5896677b47	Merge pull request #56956 from smaret/gildas gildas: 20190201_b -> 20190301_a	2019-03-06 19:28:41 -08:00
Sébastien Maret	880d0ac9f0	gildas: 20190201_b -> 20190301_a	2019-03-06 13:56:17 +01:00
Jörg Thalheim	9b57d852af	Merge pull request #56905 from timokau/pari-fix pari: fix off-by-one error	2019-03-06 11:00:07 +00:00
Jan Tojnar	d3ff902e94	webkit: move to aliases	2019-03-06 00:20:55 +01:00
Timo Kaufmann	a648b8c714	pari: fix off-by-one error Done by applying upstream patch. Will be included in the next release. Upstream: https://pari.math.u-bordeaux.fr/cgi-bin/bugreport.cgi?bug=2117	2019-03-05 21:50:44 +01:00
Timo Kaufmann	00fa98f012	pari: add timokau as maintainer I'm mostly interested in this package because it is a dependency of sage. I'd like to be notified on changes (which ofBorg will do when I'm listed as a maintainer).	2019-03-05 20:23:04 +01:00
Timo Kaufmann	5a23cb575e	pari: slight refactoring Use pname, one line per argument.	2019-03-05 20:21:26 +01:00
Peter Simons	1c6a193b3e	wxmaxima: update to version 19.03.0	2019-03-05 12:53:05 +01:00
Peter Simons	82254747af	maxima: update to version 5.42.2	2019-03-05 12:53:04 +01:00
Dmitry Kalinkin	aa4f5cc4a3	simgrid: Fix the upstream project URL Closes: #56849	2019-03-04 16:42:46 -05:00
R. RyanTM	27e05d81a5	star: 2.7.0a -> 2.7.0c Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/star/versions	2019-03-03 20:55:25 +01:00
R. RyanTM	6a987f5730	form: 4.2.0 -> 4.2.1 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/form/versions	2019-03-03 20:49:36 +01:00
R. RyanTM	9989b7c8c4	igv: 2.4.17 -> 2.4.19 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/igv/versions	2019-03-03 20:48:52 +01:00
Timo Kaufmann	37182b20a6	Merge pull request #56781 from timokau/sage-python-upgrade-fixes Sage python upgrade fixes	2019-03-03 20:48:10 +01:00
R. RyanTM	2d20e8c5f2	gtkwave: 3.3.98 -> 3.3.99 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/gtkwave/versions	2019-03-03 17:13:47 +01:00
Timo Kaufmann	9e3754786b	sage: fix strictDeps fallout See https://github.com/NixOS/nixpkgs/pull/54182 and https://github.com/NixOS/nixpkgs/pull/55757.	2019-03-03 13:25:40 +01:00
Timo Kaufmann	2de81ee78f	sage: patch for pip 19 pip 19 introduced a deprecation warning for python 2.7. Since sage internally uses pip to query for installed packages, this deprecation warning will show up at unexpected times. That is ugly and messes with the testsuite. Upstream: https://trac.sagemath.org/ticket/27405	2019-03-03 13:21:22 +01:00
R. RyanTM	4f1c44906c	cryptominisat: 5.6.6 -> 5.6.8 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/cryptominisat/versions	2019-03-01 16:58:38 -08:00
R. RyanTM	e869b87dbb	clp: 1.16.11 -> 1.17.0 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/clp/versions	2019-03-01 16:08:32 -08:00
Frederik Rietdijk	2fcb11a244	Merge staging-next into master	2019-03-01 09:06:20 +01:00
Bruno Bzeznik	598f11862c	messer-slim: init at 3.2.1	2019-02-28 15:11:18 +01:00
Anders Riutta	c792fd107b	cytoscape: bump 3.6.1 -> 3.7.1 Needed to update URL, because `wget "http://chianti.ucsd.edu/cytoscape-3.7.1/cytoscape-3.7.1.tar.gz"` returns `404`.	2019-02-27 16:40:50 -08:00
John Ericson	8293ab8461	Merge pull request #56408 from Mic92/runtime-shell treewide: use runtimeShell instead of stdenv.shell whenever possible	2019-02-26 18:04:27 -05:00
Jörg Thalheim	dadc7eb329	treewide: use runtimeShell instead of stdenv.shell whenever possible Whenever we create scripts that are installed to $out, we must use runtimeShell in order to get the shell that can be executed on the machine we create the package for. This is relevant for cross-compiling. The only use case for stdenv.shell are scripts that are executed as part of the build system. Usages in checkPhase are borderline however to decrease the likelyhood of people copying the wrong examples, I decided to use runtimeShell as well.	2019-02-26 14:10:49 +00:00
Merlin Göttlinger	5781856630	clprover: init at 1.0.3 (#56403 ) * clprover: init at 1.0.3	2019-02-26 12:36:04 +00:00
Vincent Laporte	4266523c14	why3: 1.1.1 -> 1.2.0	2019-02-25 10:09:15 +01:00
Sophie Taylor	59338fb99d	Fix sc2-headless map hash (#56320 )	2019-02-25 01:08:12 +01:00
Vladimír Čunát	71f4ba29a3	Merge branch 'master' into staging-next Hydra nixpkgs: ?compare=1506218	2019-02-22 17:51:01 +01:00
markuskowa	0b00338eb9	Merge pull request #56178 from luzpaz/gmsh-4.1.5 gmsh: 4.1.3 -> 4.1.5	2019-02-22 11:26:15 +01:00
Sophie Taylor	c736f9693d	Added maps to sc2-headless	2019-02-22 09:01:00 +00:00
luz.paz	add7b20858	gmsh: 4.1.3 -> 4.1.5	2019-02-21 22:55:48 -05:00
Frederik Rietdijk	5871da418f	Merge staging into python-unstable	2019-02-21 08:02:10 +01:00
Frederik Rietdijk	e2cd07b997	Merge staging-next into staging	2019-02-21 07:54:33 +01:00
Matthew Bauer	b1bbd94bb6	Merge remote-tracking branch 'NixOS/master' into staging	2019-02-18 20:36:48 -05:00
Ryan Mulligan	f56693f25a	Merge pull request #55052 from smaret/gildas-update gildas: 20190101_b -> 20190201_b	2019-02-17 06:46:15 -08:00
Frederik Rietdijk	04f051d79f	spyder: 3.2.8 -> 3.3.3	2019-02-17 14:40:54 +01:00
Frederik Rietdijk	4b2336ea28	python.pkgs.caffe: fix build, closes #8749	2019-02-17 10:13:22 +01:00
Gabriel Ebner	7cbc76a3e6	Merge branch 'auto-update/qalculate-gtk'	2019-02-16 17:25:47 +01:00
Frederik Rietdijk	fd48a94b62	Merge staging-next into staging	2019-02-16 09:30:46 +01:00
Frederik Rietdijk	6fe10d2779	Merge master into staging-next	2019-02-16 09:29:54 +01:00
R. RyanTM	ef405c5b67	qalculate-gtk: 2.8.2 -> 2.9.0 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/qalculate-gtk/versions	2019-02-15 11:39:04 -08:00
Sébastien Maret	a69d2c2e69	gildas: 20190201_a -> 20190201_b	2019-02-15 13:27:57 +01:00
Timo Kaufmann	9243e85fbc	sage: fix fetchSageDiff (#55783 ) For some reason I changed it to use `cgit`s `rawdiff` instead of `patch` in the update to sage 8.6. Probably commited that by accident, at least I can't remember the reason. Also changed the excludes filter, the leading slash prevented it from working. As a result, the cypari2 patch changed. Only didn't notice because it was cached. Fixes #55780	2019-02-14 21:48:03 +01:00
Samuel W. Flint	52a7c4e30e	z3: Patch file to get rid of python error See #55591, Z3Prover/z3#2131	2019-02-14 10:11:15 -06:00
Frederik Rietdijk	a25d48cd4f	Merge master into staging	2019-02-14 11:35:50 +01:00
Jan Tojnar	606ceda352	gnome3: stop using aliases	2019-02-14 02:31:15 +01:00
Michael Bishop	ac29d96d25	Merge pull request #55629 from spacekitteh/patch-30 Add maps to SC2	2019-02-13 19:13:14 -04:00
Michael Raskin	8384cfe455	Merge pull request #55129 from oxij/tree/move-defaults-to-package-files all-packages.nix: move defaults to package files	2019-02-13 20:04:08 +00:00
Frederik Rietdijk	7257dedd7c	Merge master into staging-next	2019-02-13 12:33:29 +01:00
Sophie Taylor	744e344171	Update maps.nix	2019-02-13 08:53:32 +10:00
Sophie Taylor	ce1eb1ea79	Update and rename maps.nix to maps-replays.nix	2019-02-12 10:41:41 +00:00
Sarah Brofeldt	c0cfe9bf50	Merge pull request #54991 from FlorianFranzen/sc2-headless sc2-headless: 3.17 -> 4.7.1	2019-02-12 09:42:56 +01:00
Timo Kaufmann	5728028916	sage: add numpy 1.16 compatibility patch https://trac.sagemath.org/ticket/27000	2019-02-11 21:43:56 +01:00
Timo Kaufmann	342333c0ab	sage: add compatibility for sphinx 1.8.3 (#55078 ) (#55560 ) Since https://github.com/NixOS/nixpkgs/pull/48841 was replaced by https://github.com/NixOS/nixpkgs/pull/54186, this needs to be done separately. (cherry picked from commit `33db01e6d9`)	2019-02-11 13:18:16 +01:00
Florian Franzen	f470720aa8	Merge branch 'staging-next' into staging	2019-02-10 14:37:31 +01:00
Matthew Bauer	5c09d977c7	Merge remote-tracking branch 'origin/master' into staging	2019-02-09 12:14:06 -05:00
Vladimír Čunát	d2c4b5777b	sagelib: fix missing pkgs.pkgconfig Again: `eb3f0aef43` #54306 Apparently the derivation needs both pkgconfigs (it fails when missing either).	2019-02-09 10:36:47 +01:00
tbenst	1cb81a69a0	cmtk: init at 3.3.1 (#54016 ) * cmtk: init at 3.3.1	2019-02-08 17:41:14 -05:00
Will Dietz	dcfce974d9	Merge pull request #55077 from m-labs/for-upstream rink: init at 0.4.4	2019-02-07 09:47:46 -06:00
Timo Kaufmann	dbc771f2e1	Merge pull request #55299 from r-ryantm/auto-update/jmol jmol: 14.29.29 -> 14.29.31	2019-02-06 13:15:46 +01:00
markuskowa	0496c08afd	Merge pull request #55298 from r-ryantm/auto-update/igv igv: 2.4.16 -> 2.4.17	2019-02-06 12:50:24 +01:00
Markus Kowalewski	64e9f2ad65	jmol: remove redundant name attribute version and pname are alrady present	2019-02-06 12:25:25 +01:00
R. RyanTM	a1360faba7	jmol: 14.29.29 -> 14.29.31 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/jmol/versions	2019-02-05 20:33:46 -08:00
R. RyanTM	da628f0cbd	igv: 2.4.16 -> 2.4.17 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/igv/versions	2019-02-05 20:06:55 -08:00
markuskowa	9703765556	molden: 5.8.2 -> 5.9.3 (#55044 )	2019-02-05 23:57:29 +02:00
markuskowa	5c7edec7a3	Merge pull request #55152 from r-ryantm/auto-update/star star: 2.6.1d -> 2.7.0a	2019-02-04 22:53:49 +01:00
R. RyanTM	b015c68def	verilator: 4.008 -> 4.010 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/verilator/versions	2019-02-04 11:54:29 -06:00
R. RyanTM	e27eaf6111	star: 2.6.1d -> 2.7.0a Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/star/versions	2019-02-03 17:20:27 -08:00
Jan Malakhovski	c7675be3c1	sc2-headless: move defaults to package file	2019-02-03 15:33:29 +00:00
Vladimír Čunát	32767d139f	Merge branch 'staging-next' This round is without the systemd CVE, as we don't have binaries for that yet. BTW, I just ignore darwin binaries these days, as I'd have to wait for weeks for them.	2019-02-20 09:38:45 +01:00
Michael Raskin	446520bb9b	Merge pull request #56026 from oxij/tree/move-defaults-to-package-files-half-cuda all-packages.nix: move defaults to package files continues^2	2019-02-19 21:54:02 +00:00
Vincent Laporte	e4035c3e0e	Merge pull request #55633 from vbgl/alt-ergo-2.3.0 alt-ergo: 2.2.0 -> 2.3.0	2019-02-19 09:53:57 +01:00
Frederik Rietdijk	815b77cbe6	Merge master into staging-next	2019-02-18 14:18:04 +01:00
Vladimír Čunát	f7f1a2f54e	Merge branch 'master' into staging-next A mass darwin rebuild from master (#55784).	2019-02-17 08:05:24 +01:00
Vincent Laporte	e4a8af06d1	alt-ergo: 2.2.0 -> 2.3.0	2019-02-12 09:19:06 +00:00
Jan Malakhovski	4bc66b1994	cntk: move defaults to package file	2019-02-03 15:32:16 +00:00
Jan Malakhovski	31aa884b7f	caffe: move defaults to package file	2019-02-03 15:32:15 +00:00
Jan Malakhovski	49148a3ea2	mxnet: move defaults to package file	2019-02-03 15:32:14 +00:00
Jan Malakhovski	88ca6dd78a	cplex: move defaults to package file	2019-02-03 15:30:47 +00:00
Jan Malakhovski	ec2452dac1	scilab: move defaults to package file	2019-02-03 15:30:45 +00:00
Sebastien Bourdeauducq	3b03b901fb	rink: init at 0.4.4	2019-02-03 13:29:18 +08:00
Timo Kaufmann	33db01e6d9	sage: add compatibility for sphinx 1.8.3 (#55078 ) Since https://github.com/NixOS/nixpkgs/pull/48841 was replaced by https://github.com/NixOS/nixpkgs/pull/54186, this needs to be done separately.	2019-02-02 13:02:07 +01:00
Sébastien Maret	cb72eec530	gildas: 20190101_b -> 20190201_a	2019-02-01 16:29:30 +01:00
Vladimír Čunát	8ba516664b	Merge branch 'staging-next' into staging	2019-02-01 09:42:53 +01:00
Florian Franzen	337babae4c	sc2-headless: 3.17 -> 4.7.1	2019-01-31 15:21:58 +01:00
markuskowa	e27e114803	Merge pull request #53677 from jbedo/snpeff-4.3T snpeff: 4.3q -> 4.3t	2019-01-31 10:36:32 +01:00
Robert Schütz	052acfe930	sage: python-openid: move django and twill to checkInputs (#54949 ) A search through the source code (https://github.com/openid/python-openid/search?q=django and https://github.com/openid/python-openid/search?q=twill) reveals that they are only used in examples and tests.	2019-01-31 10:14:36 +01:00
Justin Bedo	75dd587793	snpeff: 4.3q -> 4.3t	2019-01-31 15:15:05 +11:00
markuskowa	ca13dc163b	Merge pull request #49871 from wucke13/getdp getdp: init at 3.0.4	2019-01-31 00:43:08 +01:00
markuskowa	a98cebbc35	Merge pull request #54828 from r-ryantm/auto-update/gmsh gmsh: 4.1.0 -> 4.1.3	2019-01-29 12:39:06 +01:00
Sébastien Maret	d5f4b2b63e	gildas: 20181201_a -> 20190101_b	2019-01-29 11:00:45 +00:00
R. RyanTM	2b39f17d08	minimap2: 2.14 -> 2.15 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/minimap2/versions	2019-01-28 20:01:47 +00:00
R. RyanTM	2b03ef0521	gmsh: 4.1.0 -> 4.1.3 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/gmsh/versions	2019-01-28 10:33:36 -08:00
R. RyanTM	00cdff318a	picard-tools: 2.18.23 -> 2.18.25 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/picard-tools/versions	2019-01-28 17:17:30 +00:00
wucke13	4f40b5e00e	getdp: init at 3.0.4	2019-01-28 16:45:13 +01:00
Dmitry Kalinkin	b8d6cc8157	Merge pull request #54520 from veprbl/pr/sherpa_2.2.6 sherpa: 2.2.5 -> 2.2.6	2019-01-27 22:01:53 -05:00
Matthew Bauer	92f0f8dd68	Merge remote-tracking branch 'NixOS/master' into staging	2019-01-27 00:01:13 -05:00
Michael Raskin	cc74c0399e	leo3: init at 1.2	2019-01-27 01:57:11 +01:00
Artemis Tosini	51a2a08d6e	mathematica: 11.2.0 -> 11.3.0 Note that this only affects the English version, as I do not have access to the hash for the Japanese version.	2019-01-25 15:29:02 +00:00
Dmitry Kalinkin	d28bce307e	sherpa: 2.2.5 -> 2.2.6	2019-01-24 18:46:15 -05:00
worldofpeace	78da8d668b	pantheon: init a 5.0	2019-01-24 20:54:14 +00:00
Vincent Laporte	b76961124d	coq_8_9: 8.9+beta1 -> 8.9.0	2019-01-24 09:08:51 +00:00
Michael Raskin	ebb370f680	z3-tptp: init Z3 ships a TPTP-supporting wrapper as an example; allow building it	2019-01-22 16:51:18 +01:00
Vladimír Čunát	3fe32b675e	Merge branch 'master' into staging	2019-01-22 15:59:42 +01:00
Dmitry Kalinkin	958201a98f	Merge pull request #48675 from veprbl/pr/xfitter_fix xfitter: runtime fixes	2019-01-20 20:00:02 -05:00
Mario Rodas	9a18d9356d	lean: 3.4.1 -> 3.4.2	2019-01-20 06:46:37 -05:00
Austin Seipp	5069fa0a30	nixpkgs: remove sapic-0.9 SAPIC is bundled with Tamarin and doesn't have separate releases anymore; add an appropriate 'throw' clause to the alias so people know where to find it. Signed-off-by: Austin Seipp <aseipp@pobox.com>	2019-01-19 18:54:38 -06:00
Austin Seipp	fc159594a7	tamarin-prover: 1.4.0 -> 1.4.1, bundled sapic With this, we can drop the old 1.4.0 patches for 8.4 support, since those are now upstream. Furthermore, SAPIC Is now bundled inside Tamarin, so we can drop the external dependency. (This includes a patch that compiles SAPIC to native code, much like the original, to reduce closure size.) Signed-off-by: Austin Seipp <aseipp@pobox.com>	2019-01-19 18:54:38 -06:00
Dmitry Kalinkin	0f3758b5e6	Merge pull request #53839 from fusion809/marvin marvin: init at 19.1.0	2019-01-19 15:50:49 -05:00
Frederik Rietdijk	d531da6f8a	Merge pull request #54094 from rnhmjoj/shell treewide: use ${stdenv.shell} instead of /bin/sh where possible	2019-01-19 14:15:51 +01:00
Timo Kaufmann	d34f44db45	sage: fix transient ecl error (#54285 ) Sometimes the doctests fail because ecl races to create a directory. This should fix that by making sure each process has its own directory.	2019-01-18 23:02:03 +01:00
markuskowa	4545aaa671	Merge pull request #54209 from r-ryantm/auto-update/gmsh gmsh: 4.0.7 -> 4.1.0	2019-01-18 11:40:48 +01:00
worldofpeace	ce69fadb36	Merge pull request #54153 from r-ryantm/auto-update/picard-tools picard-tools: 2.18.21 -> 2.18.23	2019-01-18 01:51:04 +00:00
R. RyanTM	55ea7b1bbe	gmsh: 4.0.7 -> 4.1.0 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/gmsh/versions	2019-01-17 12:55:54 -08:00
Timo Kaufmann	e379ee67c3	sage: 8.5 -> 8.6	2019-01-17 20:39:02 +01:00
Timo Kaufmann	29e150d85f	Merge pull request #54127 from timokau/gap-improvements gap: install libgap, add packageSet option	2019-01-17 20:38:38 +01:00
Timo Kaufmann	cf63a8c94c	gap: add packageSet option Two reasons for this: - more fine-grained space/functionality tradeoff - preparation for the sage 8.6 update, which finally doesn't need a downgraded gap anymore but does break when unexpected (non-standard) packages are installed. Details: https://trac.sagemath.org/ticket/26983 The proper way to deal with gap packages would be to create a package set, package each one individually and have something like gap equivalent of `python.withPackages`. I am not willing to do that however.	2019-01-17 10:10:24 +01:00
Timo Kaufmann	bb173ec8e3	gap: install libgap There are some starts of a `make install`, but nothing complete yet. Upstream now ships a `libgap` as a replacement of the custom one used by sagemath.	2019-01-17 10:10:21 +01:00
R. RyanTM	b2a7ef628a	picard-tools: 2.18.21 -> 2.18.23 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/picard-tools/versions	2019-01-16 21:43:19 -08:00
Timo Kaufmann	6bbd0596dd	gap: add timokau as maintainer So that I'll be notified on changes which likely impact sage.	2019-01-16 23:41:31 +01:00
Timo Kaufmann	a8dbc5e313	python.pkgs.cypari2: 1.3.1 -> 2.0.3 (#54093 ) Upstream issues should be fixed now, see https://trac.sagemath.org/ticket/26442. Sage needs a patch to adapt.	2019-01-16 22:15:40 +01:00
rnhmjoj	bcf54ce5bb	treewide: use ${stdenv.shell} instead of /bin/sh where possible	2019-01-16 20:37:15 +01:00
Gabriel Ebner	49db581e8c	elan: 0.7.1 -> 0.7.2	2019-01-15 10:05:45 +01:00
Brenton Horne	6be5e679b1	marvin: init at 19.1.0 Also adding myself (fusion809) as a maintainer. The marvin Nix file in this commit is largely thanks to @msteen.	2019-01-15 00:23:38 +10:00
Johannes Frankenau	bebf305c1b	gurobi: 8.0.1 -> 8.1 (#53884 )	2019-01-13 23:22:55 +01:00
R. RyanTM	26b492b207	minimap2: 2.10 -> 2.14 (#52845 ) Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/minimap2/versions	2019-01-13 22:34:45 +01:00
Vladimír Čunát	bde8efe792	Merge branch 'master' into staging-next A couple thousand rebuilds have accumulated on master.	2019-01-12 12:19:34 +01:00
Dmitry Kalinkin	73625f2522	root5: mark as broken on Linux	2019-01-11 20:45:37 -05:00
Dmitry Kalinkin	0c9335fb1c	root, root5: fix build on darwin	2019-01-11 20:45:37 -05:00
tbenst	d34f2b9b96	bftools: init at 5.9.2 (#53769 )	2019-01-10 18:28:28 -05:00
markuskowa	b70a4b2b98	Merge pull request #53478 from bgamari/bump-ngspice ngspice: 29 -> 30	2019-01-10 20:17:54 +01:00
Vladimír Čunát	287144e342	Merge branch 'master' into staging-next	2019-01-10 13:07:21 +01:00
Austin Seipp	c10650760d	yices: s/fetchurl/fetchFromGitHub/ Signed-off-by: Austin Seipp <aseipp@pobox.com>	2019-01-08 19:15:24 -06:00
Austin Seipp	38aa0a3df4	z3: 4.8.3 -> 4.8.4 Signed-off-by: Austin Seipp <aseipp@pobox.com>	2019-01-08 19:15:24 -06:00
Austin Seipp	d77f381055	symbiyosys: 2018.09.12 -> 2018.12.09 Signed-off-by: Austin Seipp <aseipp@pobox.com>	2019-01-08 19:15:24 -06:00
Simon Lackerbauer	f7367cbf1c	abella: 2.0.5 -> 2.0.6	2019-01-08 17:05:30 +00:00
R. RyanTM	bd7eec5d9c	pynac: 0.7.22 -> 0.7.23 (#53559 ) Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/pynac/versions	2019-01-07 14:52:18 +01:00
Vladimír Čunát	10a12194e3	Merge #53490 : fix treewide linking errors after #51770 Issue #53001. This might not be all of them, but let's not wait.	2019-01-06 12:14:52 +01:00
Frederik Rietdijk	a4250d1478	Merge staging-next into staging	2019-01-06 09:48:31 +01:00
Frederik Rietdijk	e5381cdece	Merge master into staging-next	2019-01-06 09:36:23 +01:00
Jörg Thalheim	37fe593d48	cryptominisat: switch to python3	2019-01-05 16:38:10 +01:00
Jörg Thalheim	4a4d1d6497	cryptominisat: 5.0.1 -> 5.6.6	2019-01-05 12:45:44 +01:00
Frederik Rietdijk	60a3973a55	Merge staging-next into staging	2019-01-05 10:15:00 +01:00
Piotr Bogdan	71f216b7e6	golly-beta: link with lib{dl,GL} explicitly	2019-01-04 21:44:19 +00:00
Piotr Bogdan	ae7557c4cb	avogadro: fix libX11 underlinking	2019-01-04 21:13:57 +00:00
Frederik Rietdijk	9618abe87c	Merge master into staging-next	2019-01-04 21:13:19 +01:00
Lengyel Balazs	f4a53ff3bc	treewide/xorg: replace *proto with xorgproto	2019-01-04 14:38:57 +01:00
Frederik Rietdijk	0a2caa41fe	Python: drop `python.majorVersion` Drop `python.majorVersion`. For Python language version, use `python.pythonVersion`. For implementation version, use `python.sourceVersion`. Some expressions were broken. Those that were identified were fixed. fixup major	2019-01-04 10:45:22 +01:00
R. RyanTM	c7afdaf5cd	gtkwave: 3.3.97 -> 3.3.98 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/gtkwave/versions	2019-01-03 16:44:01 -05:00
Ben Gamari	537b0ac9be	ngspice: 29 -> 30 Just a simple bump.	2019-01-03 16:16:51 -05:00
Frederik Rietdijk	2da31b80bb	Merge master into staging-next	2019-01-03 20:07:35 +01:00
markuskowa	d38f103586	Merge pull request #53312 from r-ryantm/auto-update/gromacs gromacs: 2018.4 -> 2019	2019-01-03 18:52:49 +01:00
R. RyanTM	344fd2319b	gromacs: 2018.4 -> 2019 Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/gromacs/versions	2019-01-03 05:58:09 -08:00

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3115 Commits