Shea Levy
5ce31aa6b7
Revert "atlas: 3.10.2 -> 3.10.3"
...
3.10.3 segfaults with glibc 2.27, and since it was fairly recently
added via autoupdate hopefully it's not too strongly needed yet.
This reverts commit 4c28d80be2
.
2018-03-20 17:21:20 -04:00
Will Dietz
161253f0e0
Merge pull request #37047 from dtzWill/fix/openblas-numpy-musl
...
openblas, numpy: fix w/musl
2018-03-19 13:39:24 -05:00
Ryan Mulligan
4c28d80be2
atlas: 3.10.2 -> 3.10.3
...
Semi-automatic update generated by https://github.com/ryantm/nix-update tools. These checks were done:
- built on NixOS
- Warning: no binary found that responded to help or version flags. (This warning appears even if the package isn't expected to have binaries.)
- found 3.10.3 with grep in /nix/store/79z1zd6ydm6b7x6xbf8b908iirah8hqn-atlas-3.10.3
2018-03-16 01:31:41 -07:00
Will Dietz
837538da43
openblas: don't build w/openmp on musl
2018-03-15 18:27:22 -05:00
Joachim F
6ae3aa1560
Merge pull request #36640 from ryantm/auto-update/openlibm
...
openlibm: 0.5.4 -> 0.5.5
2018-03-14 21:13:44 +00:00
Josef Kemetmüller
edef344458
petsc: fix darwin build
2018-03-12 00:20:18 +01:00
Yuri Aisaka
e559fa19f3
fix compilation on gcc7
2018-03-09 22:34:25 +09:00
Ryan Mulligan
724667fa3f
openlibm: 0.5.4 -> 0.5.5
...
Semi-automatic update. These checks were done:
- built on NixOS
- Warning: no binary found that responded to help or version flags. (This warning appears even if the package isn't expected to have binaries.)
- found 0.5.5 with grep in /nix/store/im5hsldagl6la2yf5s8rsnv2w57mb76m-openlibm-0.5.5
- found 0.5.5 in filename of file in /nix/store/im5hsldagl6la2yf5s8rsnv2w57mb76m-openlibm-0.5.5
2018-03-09 05:10:28 -08:00
Ryan Mulligan
1aa5bb44ca
blas: 3.7.1 -> 3.8.0
...
Semi-automatic update. These checks were performed:
- built on NixOS
- found 3.8.0 in filename of file in /nix/store/6j28cb5b114fxj7x7wpwv8mdbiqxq1fj-blas-3.8.0
2018-03-04 18:51:48 +00:00
Anders Kaseorg
6f073154da
Give working advice for running nix-prefetch-url
...
nix-prefetch-url file://… requires a full path. Suggest an invocation
that will provide one.
Signed-off-by: Anders Kaseorg <andersk@mit.edu>
2018-03-04 17:28:36 +00:00
Ryan Mulligan
6eecefbfbe
petsc: 3.7.6 -> 3.8.3
...
Semi-automatic update. These checks were performed:
- built on NixOS
- ran `/nix/store/fgr3yvhrnvfhr0czc4ygx1mnjsrv4f4i-petsc-3.8.3/bin/saws/getSAWs.bash -h` got 0 exit code
- ran `/nix/store/fgr3yvhrnvfhr0czc4ygx1mnjsrv4f4i-petsc-3.8.3/bin/saws/getSAWs.bash --help` got 0 exit code
- ran `/nix/store/fgr3yvhrnvfhr0czc4ygx1mnjsrv4f4i-petsc-3.8.3/bin/saws/getSAWs.bash help` got 0 exit code
- ran `/nix/store/fgr3yvhrnvfhr0czc4ygx1mnjsrv4f4i-petsc-3.8.3/bin/update.py -h` got 0 exit code
- ran `/nix/store/fgr3yvhrnvfhr0czc4ygx1mnjsrv4f4i-petsc-3.8.3/bin/update.py --help` got 0 exit code
- ran `/nix/store/fgr3yvhrnvfhr0czc4ygx1mnjsrv4f4i-petsc-3.8.3/bin/update.py help` got 0 exit code
- ran `/nix/store/fgr3yvhrnvfhr0czc4ygx1mnjsrv4f4i-petsc-3.8.3/bin/update.py -V` and found version 3.8.3
- ran `/nix/store/fgr3yvhrnvfhr0czc4ygx1mnjsrv4f4i-petsc-3.8.3/bin/update.py -v` and found version 3.8.3
- ran `/nix/store/fgr3yvhrnvfhr0czc4ygx1mnjsrv4f4i-petsc-3.8.3/bin/update.py --version` and found version 3.8.3
- ran `/nix/store/fgr3yvhrnvfhr0czc4ygx1mnjsrv4f4i-petsc-3.8.3/bin/update.py version` and found version 3.8.3
- ran `/nix/store/fgr3yvhrnvfhr0czc4ygx1mnjsrv4f4i-petsc-3.8.3/bin/update.py -h` and found version 3.8.3
- ran `/nix/store/fgr3yvhrnvfhr0czc4ygx1mnjsrv4f4i-petsc-3.8.3/bin/update.py --help` and found version 3.8.3
- ran `/nix/store/fgr3yvhrnvfhr0czc4ygx1mnjsrv4f4i-petsc-3.8.3/bin/update.py help` and found version 3.8.3
- ran `/nix/store/fgr3yvhrnvfhr0czc4ygx1mnjsrv4f4i-petsc-3.8.3/bin/petscnagupgrade.py -h` got 0 exit code
- ran `/nix/store/fgr3yvhrnvfhr0czc4ygx1mnjsrv4f4i-petsc-3.8.3/bin/petscnagupgrade.py --help` got 0 exit code
- ran `/nix/store/fgr3yvhrnvfhr0czc4ygx1mnjsrv4f4i-petsc-3.8.3/bin/petscnagupgrade.py help` got 0 exit code
- ran `/nix/store/fgr3yvhrnvfhr0czc4ygx1mnjsrv4f4i-petsc-3.8.3/bin/sendToJenkins -h` got 0 exit code
- ran `/nix/store/fgr3yvhrnvfhr0czc4ygx1mnjsrv4f4i-petsc-3.8.3/bin/sendToJenkins --help` got 0 exit code
- ran `/nix/store/fgr3yvhrnvfhr0czc4ygx1mnjsrv4f4i-petsc-3.8.3/bin/sendToJenkins -h` and found version 3.8.3
- ran `/nix/store/fgr3yvhrnvfhr0czc4ygx1mnjsrv4f4i-petsc-3.8.3/bin/sendToJenkins --help` and found version 3.8.3
- ran `/nix/store/fgr3yvhrnvfhr0czc4ygx1mnjsrv4f4i-petsc-3.8.3/bin/petscdiff -h` got 0 exit code
- ran `/nix/store/fgr3yvhrnvfhr0czc4ygx1mnjsrv4f4i-petsc-3.8.3/bin/petscdiff --help` got 0 exit code
- ran `/nix/store/fgr3yvhrnvfhr0czc4ygx1mnjsrv4f4i-petsc-3.8.3/bin/petscdiff -h` and found version 3.8.3
- ran `/nix/store/fgr3yvhrnvfhr0czc4ygx1mnjsrv4f4i-petsc-3.8.3/bin/petscdiff --help` and found version 3.8.3
- found 3.8.3 with grep in /nix/store/fgr3yvhrnvfhr0czc4ygx1mnjsrv4f4i-petsc-3.8.3
2018-03-03 11:03:57 +00:00
Ryan Mulligan
d3a20a674c
openspecfun: 0.4 -> 0.5.3
...
Semi-automatic update. These checks were performed:
- built on NixOS
- found 0.5.3 in filename of file in /nix/store/yqsgs9hw8c3rdia75rswgk98lz3c52ih-openspecfun-0.5.3
cc "@ttuegel"
2018-02-27 09:02:15 -08:00
Nikolay Amiantov
41abde91ce
nccl: 1.2.4-1 -> 2.1.4
...
It's closed source now.
2018-02-25 22:24:09 +03:00
Nikolay Amiantov
e77d2106bf
ipopt: 3.12.8 -> 3.12.9
2018-02-25 22:24:09 +03:00
Nikolay Amiantov
efe836160f
cudatoolkit: 9.0.176 -> 9.1.85.1
2018-02-25 22:24:09 +03:00
Yuri Aisaka
f8c48908f7
caffe2: init at 0.8.1 ( #34956 )
2018-02-16 15:09:40 +00:00
Will Dietz
8dfe068f86
openblas: patch to fix on non-glibc
2018-02-13 09:44:48 -06:00
Will Dietz
c8081971f4
openblas: NO_AFFINITY=1 fix for musl
2018-02-13 09:44:48 -06:00
Renato Alves
b2284e0454
htslib: 1.6 -> 1.7
2018-02-06 15:37:50 +01:00
Markus Kowalewski
a16880533f
arpack: remove FFLAGS
2018-01-22 15:52:57 -08:00
Markus Kowalewski
eb30d65de6
arpack: 3.3.0 -> 3.5.0
2018-01-22 15:36:43 -08:00
Tuomas Tynkkynen
722295fc15
openblas: Support ARMv6
2017-12-30 00:19:57 +02:00
hyphon81
05573d3e06
nccl: init at 1.3.4-1
2017-12-28 17:46:52 +01:00
Orivej Desh
4de81540df
Merge pull request #32427 from TravisWhitaker/cudnn
...
cuDNN 7.0.3 -> 7.0.5
2017-12-17 04:25:42 +00:00
georgewhewell
73b65551f4
openblas: add aarch64 platform config
2017-12-11 19:22:07 +02:00
Travis Whitaker
777c9bfdae
cuDNN 7.0.3 -> 7.0.5
2017-12-07 15:13:07 -08:00
Orivej Desh
45cf0b0da4
fenics: restrict to Darwin
...
It has never been building on Linux.
2017-12-01 07:17:15 +00:00
Orivej Desh
4d50d79bc8
atlas: disable parallel building
2017-11-22 06:49:21 +00:00
Orivej Desh
d5e3935a6a
atlas: enable parallel building
2017-11-21 19:29:10 +00:00
Nikolay Amiantov
77046bed8a
cudnn7: 7.0 -> 7.0.3
2017-10-28 17:39:59 +03:00
Nikolay Amiantov
50a223b144
clblas: 20160505 -> 2.12
2017-10-19 12:47:30 +03:00
Nikolay Amiantov
6309e5fa01
cudnn: refactor to use shared derivation
...
Also return 8.0-6.0 version for TensorFlow.
2017-10-19 12:47:30 +03:00
Nikolay Amiantov
ce9059a120
cudnn_cudatoolkit9: init at 7.0
...
Make it the default.
2017-10-19 12:47:30 +03:00
Orivej Desh
047c576353
Merge pull request #29963 from mimadrid/update/samtools-1.6.0
...
samtools: 1.5.0 -> 1.6.0
2017-10-02 01:07:11 +00:00
Orivej Desh
0acf94bb9f
htslib: fix up
2017-10-01 07:12:52 +00:00
mimadrid
25b17ae1d7
htslib: 1.5.0 -> 1.6.0
2017-09-30 22:14:49 +02:00
Nikolay Amiantov
098c6825e0
blas: 3.5.0 -> 3.7.1
2017-09-25 22:46:44 +03:00
Jörg Thalheim
aab8f8df4b
nifticlib: use mirror for sourceforge
2017-09-21 09:10:12 +01:00
Ben Darwin
0d981c5761
nifticlib: init at 2.0.0
2017-09-20 19:04:22 -04:00
John Ericson
8fccaa284d
Merge pull request #29282 from obsidiansystems/soext
...
lib, treewide: Add `*Platform.extensions` and use it where possible
2017-09-13 11:20:06 -04:00
John Ericson
5aec3f96a2
treewide: Use *Platform.extensions
2017-09-13 11:16:10 -04:00
Jean-Philippe Bernardy
1ba197f225
make my maintainer handle match my github username
2017-09-12 15:17:18 +02:00
Jean-Philippe Bernardy
d51bd36646
cudnn: add 6.0
2017-09-07 09:28:03 +02:00
jamtrott
c8c0cd4d6c
petsc: init at 3.7.6 ( #28368 )
...
* petsc: init at 3.7.6
* petsc: use configureFlagsArray
* petsc: Remove unneeded binaries
2017-09-03 17:11:16 +01:00
James D. Trotter
518fb60797
fenics: init at 2017.1.0
2017-08-15 16:19:45 +02:00
Frederik Rietdijk
b14efb6a6c
Merge pull request #28211 from mimadrid/update/samtools-1.5.0
...
samtools: 1.4.0 -> 1.5.0
2017-08-13 22:32:48 +02:00
mimadrid
302e7825fa
htslib: 1.4.0 -> 1.5.0
2017-08-13 00:16:42 +02:00
mimadrid
09e0cc7cc7
Update homepage attributes: http -> https
...
Homepage link "http://.../ " is a permanent redirect to "https://.../ " and should be updated
https://repology.org/repository/nix_stable/problems
2017-08-03 11:56:15 +02:00
Silvan Mosberger
f5fa5fa4d6
pkgs: refactor needless quoting of homepage meta attribute ( #27809 )
...
* pkgs: refactor needless quoting of homepage meta attribute
A lot of packages are needlessly quoting the homepage meta attribute
(about 1400, 22%), this commit refactors all of those instances.
* pkgs: Fixing some links that were wrongfully unquoted in the previous
commit
* Fixed some instances
2017-08-01 22:03:30 +02:00
Frederik Rietdijk
ec59e3b3f5
openblas: 0.2.19 -> 0.2.20
2017-07-28 18:08:06 +02:00
Nikolay Amiantov
5fdc1e763f
ipopt: 3.12.6 -> 2.12.8
2017-07-27 17:07:44 +03:00
Ben Darwin
d1d0824b2f
elastix: change platforms to "linux" from "unix"
2017-07-19 17:41:14 -04:00
Ben Darwin
b21805d972
elastix: init at 4.8
2017-05-23 18:25:15 -04:00
Tyson Whitehead
8fdbc828b9
clblas-cuda: requires ocl-icd now for libOpenCL.so.1 #25902
2017-05-18 18:32:09 -04:00
Jörg Thalheim
be19ad150c
Merge pull request #25594 from mimadrid/update/htslib-1.4
...
Update/htslib 1.4
2017-05-11 07:08:56 +01:00
mimadrid
295a23a2db
htslib: 1.3.2 -> 1.4
2017-05-07 23:15:42 +02:00
Daiderd Jordan
f240276000
blas: fix darwin library id
2017-04-27 23:25:07 +02:00
Vladimír Čunát
6617c8bd87
A fixed version of commit eb750f9a7b
...
For detailed explanation see:
https://github.com/NixOS/nixpkgs/commit/24444513fb5#commitcomment-21767916
2017-04-14 18:59:36 +02:00
Joachim Fasting
540a6412e3
suitesparse_4_4: NIX_CFLAGS -> NIX_CFLAGS_COMPILE
...
Tested with nix-build -A suitesparse_4_4
2017-04-12 19:27:03 +02:00
Joachim Fasting
a883581ddb
suitesparse_4_2: remove bogus NIX_CFLAGS
...
NIX_CFLAGS should be NIX_CFLAGS_COMPILE; since pic is the default, we
simply remove the bogus declaration.
Tested with nix-build -A suitesparse_4_2
2017-04-12 19:26:58 +02:00
Frederik Rietdijk
767e459200
Merge pull request #22726 from matthewbauer/openblas-closure-size
...
openblas: disable static libs
2017-04-10 16:11:19 +02:00
Matthew Daiter
d712c04d25
suitesparse: refining CUDA support
2017-04-04 17:23:20 +02:00
Matthew Daiter
6f721ce534
suitesparse: add CUDA support
2017-03-29 15:47:51 +02:00
Matthew Bauer
bd8654f45d
openblas: disable static libs
...
Disable static on openblas. This should save about 57M from closure sizes.
2017-02-12 18:45:44 -06:00
Matthew Daiter
82835f7eb3
cudnn51_cudatoolkit80: hash change
2017-02-08 18:40:32 +01:00
Anthony Cowley
084a76ef6f
atlas: change platforms to unix
...
The build succeeds on darwin and linux.
2017-01-10 21:02:04 -05:00
Robert Helgesson
2990cd8aea
clblas-cuda: use system gtest library
...
Without this the build attempts to download the library.
2016-12-28 12:21:07 +01:00
mimadrid
25c984f940
htslib: 1.3.1 -> 1.3.2
2016-12-23 19:31:44 -05:00
Thomas Tuegel
bed668c051
openblas: refactor and set TARGET always
2016-12-10 16:49:45 -06:00
Nikolay Amiantov
be95ceaff2
treewide: quote URLs in my packages
2016-11-24 01:17:52 +03:00
Matthew Daiter
3897b344f3
cudnn51_cudatoolkit80: Init at 5.1-8.0
2016-11-21 14:51:39 +01:00
Falco Peijnenburg
5f5f0614b0
Support for ARM in openblas
...
Attempting to build openblas on ARM resulted in the error "unsopported system: armv7l_linux". This PR resolves that issue and some other issues that pop up when trying to build openblas for ARM.
2016-11-18 12:44:49 +01:00
Matthew Daiter
541b3fc7d2
cudnn5_cudatoolkit80: adding to main repo
2016-11-07 12:07:29 +01:00
Daiderd Jordan
3187b01720
Merge pull request #19816 from veprbl/octave_fixes
...
octave: darwin fix
2016-11-05 10:49:33 +01:00
Frederik Rietdijk
7077a270bf
Merge remote-tracking branch 'upstream/master' into HEAD
2016-10-26 13:06:43 +02:00
Dmitry Kalinkin
a8eb57d953
openblas: silence warnings on darwin
...
Without this one gets a lot of build time warnings like:
ld: warning: object file (/tmp/strip.2OzFn8) was built for newer OSX
version (10.9) than being linked (10.7)
2016-10-23 21:19:14 -04:00
Thomas Tuegel
a58ec829e4
openblas: disable some hardening flags
2016-10-22 12:57:40 -05:00
Frederik Rietdijk
9b66b5c2cc
liblapack: use python2
2016-10-18 23:16:05 +02:00
Thomas Tuegel
d94abcb157
openblas: 0.2.17 -> 0.2.19
2016-09-09 19:42:54 -05:00
Michael Raskin
6b075ee8b1
openlibm: 0.4.1 -> 0.5.4
2016-09-06 19:31:38 +02:00
obadz
0e8d2725dc
Merge branch 'master' into staging
2016-08-23 18:50:06 +01:00
Tuomas Tynkkynen
a18ee4acb7
treewide: Make explicit that 'dev' output of boost is used
...
Also fix one incorrect output in geant.
2016-08-23 04:32:21 +03:00
Tuomas Tynkkynen
d3705faa56
treewide: Use makeLibraryPath in LD_LIBRARY_PATHs
2016-08-23 00:14:00 +03:00
Robin Gloster
33e1c78ae3
Merge remote-tracking branch 'upstream/master' into hardened-stdenv
2016-08-16 07:54:01 +00:00
Nikolay Amiantov
0464600859
ipopt: 3.12.4 -> 3.12.6
2016-08-14 22:37:08 +03:00
Robin Gloster
1b979d8384
Merge remote-tracking branch 'upstream/master' into hardened-stdenv
2016-08-03 13:34:44 +00:00
Tuomas Tynkkynen
21f17d69f6
treewide: Add lots of meta.platforms
...
Build-tested on x86_64 Linux & Mac.
2016-08-02 21:42:43 +03:00
Robin Gloster
1f04b4a566
Merge remote-tracking branch 'upstream/master' into hardened-stdenv
2016-07-21 00:56:43 +00:00
Josef Kemetmueller
f3dc4d9ec3
superlu: init at 5.2.1
2016-07-19 12:37:08 +00:00
Franz Pletz
f597e97236
atlas: Fix hardening
2016-07-13 19:30:52 +02:00
Franz Pletz
26dd9acba5
Merge remote-tracking branch 'origin/master' into hardened-stdenv
2016-07-09 13:21:28 +02:00
Joachim Fasting
46b07b335b
Merge pull request #16379 from mimadrid/init/bcftools-1.3.1
...
bcftools: init at 1.3.1
2016-06-24 22:15:51 +02:00
mimadrid
d3da5cbf44
htslib: init at 1.3.1
2016-06-24 21:08:16 +02:00
artuuge
465d6a2113
Theano-cuda: init at 0.8.2
2016-06-20 01:06:07 +02:00
Robin Gloster
8031cba2ab
Merge remote-tracking branch 'upstream/master' into hardened-stdenv
2016-06-10 09:27:04 +00:00
artuuge
5b51f0bff9
clblas-cuda: init at git-20160505
2016-06-05 14:33:19 +02:00
Ian-Woo Kim
ff8985e7ab
cudnn: add cudatoolkit to propagatedBuildInputs
2016-06-02 19:33:03 +02:00
Robin Gloster
2d382f3d98
Merge remote-tracking branch 'upstream/master' into hardened-stdenv
2016-05-30 19:39:34 +00:00
Arseniy Seroka
c6b3aca4e2
Merge pull request #15654 from wavewave/magma
...
magma: init at 2.0.2
2016-05-26 01:02:14 +03:00
Ian-Woo Kim
e47070ad64
cudnn: init at 4.0
2016-05-25 18:26:57 +00:00
Ian-Woo Kim
fd42fccd4c
magma: init at 2.0.2
2016-05-25 18:14:41 +00:00
Franz Pletz
f8d481754c
Merge remote-tracking branch 'origin/master' into hardened-stdenv
2016-05-18 17:10:02 +02:00
Peter Simons
8e462995ba
Bring my stdenv.lib.maintainers user name in line with my github nick.
2016-05-16 22:49:55 +02:00
Evgeny Egorochkin
4b979eef29
atlas: put the name suffix where it belongs
2016-05-16 10:19:38 +03:00
Robin Gloster
d020caa5b2
Merge remote-tracking branch 'upstream/master' into hardened-stdenv
2016-04-18 13:49:22 +00:00
=
9ec9da1a24
iSpike: init at 2.1.1
2016-04-12 14:36:20 +02:00
Robin Gloster
696d85a62d
Merge remote-tracking branch 'upstream/master' into hardened-stdenv
2016-04-03 11:01:57 +00:00
Frederik Rietdijk
4bd01c5cbd
openblas_2_14: remove
...
because we don't need it for numpy anymore.
2016-03-31 21:51:45 +02:00
Franz Pletz
2e08d8234e
Merge remote-tracking branch 'origin/master'
2016-03-31 10:06:30 +02:00
Frederik Rietdijk
c1abb1d404
openblas: 0.2.15 -> 0.2.17
2016-03-28 15:58:10 +02:00
Robin Gloster
3f45f0948d
Merge remote-tracking branch 'upstream/master' into hardened-stdenv
2016-03-15 01:44:24 +00:00
Anthony Cowley
f3a6f3e2f3
suitesparse: build dylibs on darwin
...
Makes the shared libraries usable on darwin so that, e.g., the Julia
compiler may be built.
2016-03-13 04:13:26 -04:00
Anthony Cowley
9d1053dc6d
suitesparse: darwin compatibility
...
There is no librt on darwin, so it must be disabled.
2016-03-12 21:17:15 -05:00
Robin Gloster
5969a59052
Merge remote-tracking branch 'upstream/master' into hardened-stdenv
2016-02-09 16:28:44 +00:00
Frederik Rietdijk
3e476a73ef
openblas_2_14: init at 0.2.14
2016-02-08 20:33:31 +01:00
Robin Gloster
acb408646e
remove local pic flags, now set by hardened stdenv
2016-01-30 16:36:57 +00:00
Thomas Tuegel
36a08ce5a0
arpack: 3.2.0 -> 3.3.0
2015-12-28 11:44:03 -06:00
Thomas Tuegel
cd7cfcc9a2
arpack: include OpenBLAS path in pkgconfig file
2015-12-22 14:22:19 -06:00
Vladimír Čunát
ffb72182a6
blas: fix remains of hardcoded version
...
Thanks to @knedlsepp for pointing out
2b71fdbbc3 (commitcomment-14919659)
2015-12-11 10:25:40 +01:00
Pascal Wittmann
7fd2796e99
Replace 'with plaforms; platform' with 'platforms.platform'
2015-11-17 21:30:43 +01:00
Thomas Tuegel
9a2d5cb4d5
openblas: include which
on all platforms
...
The `f_check` script uses `which` to check that the Fortran compiler is
available. `which` is a shell built-in on NixOS, but not on Darwin or
other Linuxes.
2015-11-07 14:00:04 -06:00
Thomas Tuegel
841df2cd7a
openblas: use packaged LAPACK
...
Upstream began shipping OpenBLAS with LAPACK 3.4.1. This is the version
we were using in Nixpkgs anyway, so there is no reason to continue
copying the LAPACK sources into the build tree.
2015-11-07 14:00:04 -06:00
Thomas Tuegel
3d87c5f9c3
openblas: 0.2.14 -> 0.2.15
2015-11-05 10:24:31 -06:00
Thomas Tuegel
b3bb609b96
atlas: build on Linux only
...
Fixes #10808 .
2015-11-04 12:36:23 -06:00
Jude Taylor
9da6517c36
atlas: patch out usage of deprecated tmpnam on darwin
2015-10-30 20:15:26 -07:00
Vladimír Čunát
2b71fdbbc3
blas: fix by updating, fixes #10420 , close #10545
...
The new URL also looks more stable.
2015-10-22 20:13:33 +02:00
Nikolay Amiantov
d54a459063
ipopt: 3.12.3 -> 3.12.4
2015-10-15 17:06:23 +03:00
Thomas Tuegel
0daee71b1c
suitesparse: link shared library against openblas
2015-10-11 09:16:34 -05:00
Thomas Tuegel
eb300443f0
openblas: run tests
2015-10-11 09:16:27 -05:00
Thomas Tuegel
cd2c0e4e86
openspecfun: init at 0.4
2015-10-10 12:55:30 -05:00
Thomas Tuegel
f9e7011626
fixup! openlibm: init at 0.4.1
2015-10-10 12:55:08 -05:00
Thomas Tuegel
3436c78fc3
openlibm: init at 0.4.1
2015-10-09 19:02:01 -05:00
Thomas Tuegel
aa4efac850
arpack: update homepage
2015-09-16 11:08:39 -05:00
danshapero
8885889b48
metis: init at 5.1.0
2015-08-13 16:53:18 +02:00
Thomas Tuegel
74e4f6befa
ipopt: build with openblas
2015-06-12 07:26:47 -05:00
Thomas Tuegel
71b848b45d
openblas: build with USE_OPENMP=0 on Darwin
...
Darwin's clang does not support OpenMP yet. OpenMP is required on other
platforms for e.g. Julia.
2015-06-09 06:34:52 -05:00
Thomas Tuegel
fff0191f48
arpack: build with openblas
2015-06-04 17:42:03 -05:00
Thomas Tuegel
e36b3ec0a5
suitesparse: build shared libraries
2015-06-04 17:42:03 -05:00
Thomas Tuegel
a17d8bcc4b
suitesparse_4_4: update to 4.4.4
2015-06-04 17:42:02 -05:00
Thomas Tuegel
e5ee1a0577
suitesparse: remove unnecessary patches
2015-06-04 17:42:02 -05:00
Thomas Tuegel
b02f300c44
suitesparse_4_4_1: build with openblas
...
Compared to ATLAS, OpenBLAS offers better performance, faster builds,
and dynamic architecture detection.
2015-06-04 17:42:01 -05:00
Thomas Tuegel
982aabc561
suitesparse_4_2: build with openblas
...
Compared to ATLAS, OpenBLAS offers better performance, faster builds,
and dynamic architecture detection.
2015-06-04 17:42:01 -05:00
Thomas Tuegel
b4eb8a5bc3
openblas: remove old expressions
2015-06-04 17:42:01 -05:00
Thomas Tuegel
86fb034008
openblas: build with native-width integers by default
2015-06-04 17:42:01 -05:00
Thomas Tuegel
14ee766024
openblas: set NUM_THREADS and USE_OPENMP
2015-06-04 17:42:00 -05:00
Peter Simons
d3073741a3
Merge pull request #8042 from adnelson/liblapack_atlas_dependency_optional
...
Liblapack atlas dependency optional
2015-05-30 19:25:54 +02:00
Allen Nelson
e001340cf6
returned to two-file structure for liblapack
2015-05-28 21:49:06 -05:00
Peter Simons
99273a6716
Merge pull request #8047 from nckx/master
...
Don't use "with licenses;" for single licences
2015-05-28 22:14:53 +02:00
Peter Simons
bcd5dc6bac
Merge pull request #8023 from thinkpad20/pure_liblapack
...
added cmake flag to prevent autodetection of SDK directory
2015-05-28 21:44:07 +02:00
Allen Nelson
2c125cf37a
removed default dependency of liblapack on ATLAS. was causing an unnecessary double-build of atlas
2015-05-28 12:39:49 -05:00
Tobias Geerinckx-Rice
158e1cfdd0
Don't use "with licenses;" for single licences
...
And don't use square brackets on such lines.
2015-05-28 19:20:29 +02:00
Tobias Geerinckx-Rice
b2d7f4b1ba
Use common licence attributes from lib/licenses.nix
...
Many (less easily automatically converted) old-style strings
remain.
Where there was any possible ambiguity about the exact version or
variant intended, nothing was changed. IANAL, nor a search robot.
Use `with stdenv.lib` wherever it makes sense.
2015-05-27 22:00:06 +02:00
Allen Nelson
6eb8ff878d
added cmake flag to prevent autodetection of SDK directory
2015-05-27 12:42:40 -07:00
Allen Nelson
2a0a5c697e
added clang dependency, using unix platform
2015-05-18 17:47:03 -05:00
Allen Nelson
b4b6215523
added flags/switches necessary to get openblas to compile on osx
2015-05-18 17:01:43 -05:00
Nikolay Amiantov
f1b51945bc
ti-rpc: update package
2015-05-18 17:21:08 +03:00
Pascal Wittmann
f99d5cf2fc
Fixed some descriptions
2015-04-28 10:55:20 +02:00
Thomas Tuegel
8ed9f847b1
openblas: update to 0.2.14
2015-04-24 18:21:20 -05:00
Thomas Tuegel
c90744fcb5
openblas: downgrade to 0.2.12, build generic target
2015-04-17 07:35:19 -05:00
Nikolay Amiantov
d5d8efa0b8
ipopt: update
2015-03-29 13:05:27 +03:00
Thomas Tuegel
b692340441
openblas: fix build on i686
2015-02-26 06:44:03 -06:00
Nikolay Amiantov
d6363498e0
ipopt: update package
2015-02-03 14:27:51 +03:00
Domen Kožar
de9f27b07d
remove biolib
2015-01-18 11:52:00 +01:00
Raffael Mancini
3878472f02
ipopt: fix build after minor gcc update ( close #5519 )
...
The configure script only checks for a specific version to enable a fix in
finding cstdlib and cstring.
2015-01-01 11:12:19 +01:00
Thomas Tuegel
d582090a15
suitesparse: add version 4.4.1
2014-12-27 13:47:53 -06:00
Thomas Tuegel
81c0f94d74
arpack: build against atlasWithLapack
2014-12-27 13:40:40 -06:00
Thomas Tuegel
893f277bd7
arpack: version bump to 3.2.0
2014-12-27 13:40:40 -06:00
Thomas Tuegel
3ce76d4dd0
atlas: optionally build with full lapack
2014-12-27 13:40:40 -06:00
Thomas Tuegel
91657e30ca
atlas: fix generic options
...
Build atlas with the generic options recommended by the upstream
documentation for distributions. The expression now takes the parameter
'threads' which configures the number of threads atlas will use. The
default is to build serial atlas ('threads = "0"'). The expression also
takes the parameter 'cacheEdge' which is the L2 cache per core, in
bytes. This reduces build time because the cache size doesn't need to be
detected. It also reduces impurity, since different build nodes on Hydra
may have different hardware. It is set to 256k by default, which is
recommended for distributions by the upstream documentation.
2014-12-27 13:40:40 -06:00
Thomas Tuegel
8a5d7e7944
openblas: version bump to 0.2.13
2014-12-27 13:40:40 -06:00
Nikolay Amiantov
bfbb46ea92
ipopt: add package
2014-11-12 03:43:35 +03:00
Mateusz Kowalczyk
007f80c1d0
Turn more licenses into lib.licenses style
...
Should eval cleanly, as far as -A tarball tells me.
Relevant: issue #2999 , issue #739
2014-11-06 00:48:16 +00:00
Thomas Tuegel
16901dcae2
atlas: add ttuegel as maintainer
2014-09-21 11:00:24 -05:00
Thomas Tuegel
1d8d3d8bbe
atlas: version bump to 3.10.2
2014-09-21 11:00:24 -05:00
Thomas Tuegel
634b9ae6d4
openblas: add ttuegel as maintainer
2014-08-29 10:06:24 -05:00
Thomas Tuegel
9ade2dfa3c
openblas: add local build preference to pinned versions
2014-08-29 10:06:24 -05:00
Thomas Tuegel
df731f151f
openblas: add version 0.2.11
2014-08-29 10:06:24 -05:00
Thomas Tuegel
40ccaa2b4c
openblas: pin all the versions julia requires
2014-08-29 10:06:24 -05:00
Bjørn Forsman
c9baba9212
Fix many package descriptions
...
(My OCD kicked in today...)
Remove repeated package names, capitalize first word, remove trailing
periods and move overlong descriptions to longDescription.
I also simplified some descriptions as well, when they were particularly
long or technical, often based on Arch Linux' package descriptions.
I've tried to stay away from generated expressions (and I think I
succeeded).
Some specifics worth mentioning:
* cron, has "Vixie Cron" in its description. The "Vixie" part is not
mentioned anywhere else. I kept it in a parenthesis at the end of the
description.
* ctags description started with "Exuberant Ctags ...", and the
"exuberant" part is not mentioned elsewhere. Kept it in a parenthesis
at the end of description.
* nix has the description "The Nix Deployment System". Since that
doesn't really say much what it is/does (especially after removing
the package name!), I changed that to "Powerful package manager that
makes package management reliable and reproducible" (borrowed from
nixos.org).
* Tons of "GNU Foo, Foo is a [the important bits]" descriptions
is changed to just [the important bits]. If the package name doesn't
contain GNU I don't think it's needed to say it in the description
either.
2014-08-24 22:31:37 +02:00
Michael Raskin
33ef69390b
Fix Julia 0.3.0 build (for most purposes). Not making default yet because it is unclear if I missed something important. Failed to make it use external openblas and lapack correctly…
2014-08-24 00:24:55 +04:00
Michael Raskin
d2539c6ff5
Adding Julia 0.3.0: some progress, but doesn't work yet
2014-08-21 22:09:55 +04:00
Michael Raskin
9fe10c90fa
Properly mark platform support for arpack in relation to its openblas dependency
2014-08-10 16:36:48 +04:00
Eelco Dolstra
8a7f3c3618
Mark a bunch of packages as broken or not supported on Darwin
2014-08-08 17:59:02 +02:00
Mateusz Kowalczyk
7a45996233
Turn some license strings into lib.licenses values
2014-07-28 11:31:14 +02:00
Rob Vermaas
1a6a797ec3
Add liblbfgs 1.10
2014-05-07 14:22:04 +02:00
Thomas Tuegel
df5639183c
Claim maintainership of recently added packages
...
Also set platforms for some packages where it was missing.
2014-03-07 11:23:30 -06:00
Thomas Tuegel
2bd2747a50
arpack: version 3.1.5, fix pkgconfig
2014-03-01 18:46:53 -06:00
Thomas Tuegel
bcd9f04226
add arpack-3.1.4
2014-01-26 08:57:11 -06:00
Michael Raskin
4dad238bab
Fix forced CPU choice according to current openblas documentation
2014-01-05 16:34:05 +04:00
Jonas Hoersch
5ddefd6155
blas: update to version 20110419
2013-09-17 16:40:34 +02:00
Peter Simons
a940651968
liblapack: add myself as a maintainer and enable Hydra builds (in stdenv-updates)
2013-08-16 22:45:30 +02:00
Peter Simons
400d4a03b0
Update references to 'rLang' to the new name 'R'.
2013-07-04 23:41:22 +02:00
Peter Simons
3df0409cb6
liblapack: propagate the 'shared' flag to atlas
2013-07-04 13:42:47 +02:00
Evgeny Egorochkin
9c6f7cc9c1
Add package versions to some of the packages or fix existing ones to conform to nixpkgs conventions.
2013-06-07 03:15:45 +03:00
Eelco Dolstra
2aa6f262cb
Merge remote-tracking branch 'origin/master' into stdenv-updates
2013-02-15 13:36:34 +01:00
Peter Simons
83df975ba8
atlas: allow users to override the CPU configuration used to build ATLAS
2013-02-06 12:27:23 +01:00
Peter Simons
3334f33daf
atlas: update to version 3.10.1
...
This patch fixes issue #297 .
2013-02-06 11:31:49 +01:00
Eelco Dolstra
5bb548d2e4
Merge remote-tracking branch 'origin/master' into stdenv-updates
2013-01-17 14:19:14 +01:00
Eelco Dolstra
7fd42a8380
Get rid of the "sf" alias for "sourceforge"
2013-01-14 12:00:32 +01:00
Eelco Dolstra
ab3eeabfed
Rename buildNativeInputs -> nativeBuildInputs
...
Likewise for propagatedBuildNativeInputs, etc. "buildNativeInputs"
sounds like an imperative rather than a noun phrase.
2012-12-28 19:20:09 +01:00