Commit Graph

1207 Commits

Author SHA1 Message Date
Matthew Daiter
093130f802 openmvs: init at current master (#25672)
* openmvs: init at current master

* openmvs: simplify expression

* openmvs: init at unstable-2017-05-01
2017-05-12 20:07:11 +01:00
Jörg Thalheim
be19ad150c Merge pull request #25594 from mimadrid/update/htslib-1.4
Update/htslib 1.4
2017-05-11 07:08:56 +01:00
mimadrid
8d1bebf83c
bcftools: 1.3.1 -> 1.4 2017-05-11 07:04:33 +01:00
Peter Hoeg
32b57bec77 Merge pull request #25588 from mimadrid/update/weka-3.8.1
weka: 3.8.0 -> 3.8.1
2017-05-09 17:39:05 +08:00
mdaiter
fdd28b6fe0
openmvg: clarify Git version
fixes #25615
2017-05-09 09:39:41 +01:00
Frederik Rietdijk
183cada05a Merge pull request #25590 from mimadrid/update/cytoscape-3.5.1
cytoscape: 3.4.0 -> 3.5.1
2017-05-09 10:03:20 +02:00
mimadrid
9073e67568
samtools: 1.3.1 -> 1.4 2017-05-07 23:15:48 +02:00
mimadrid
0ed5b1c867
cytoscape: 3.4.0 -> 3.5.1 2017-05-07 23:05:59 +02:00
mimadrid
bfc3d976f3
weka: 3.8.0 -> 3.8.1 2017-05-07 22:54:09 +02:00
Michael Raskin
587ed894a4 Merge pull request #25480 from mdaiter/openmvg
openmvg: init at v1.1
2017-05-05 15:58:17 +02:00
Matthew Daiter
c6385eb0f5 openmvg: init at v1.1 2017-05-05 15:51:32 +02:00
Daniel Frank
f3f38eccbb kicad: update to 4.0.6 2017-05-04 20:39:20 +02:00
Peter Simons
5e5d16f425 R: import upstream patch to fix broken "R CMD Sweave" command
The command "R CMD Sweave" always exits with error code "1", even if the
command was successful. This upstream patch remedies this issue.
2017-05-03 14:20:41 +02:00
Aneesh Agrawal
bd9246b009 treewide: Always use integers for meta.priority
Meta attributes types are now enforce as of commit
90b9719f4f,
so ensure meta.priority is always set to an integer.

This fixes evaluation of `linuxPackages_latest.virtualbox`
(the impetus for this commit)
and other packages that use lowPrio or hiPrio.
2017-05-02 01:43:22 -04:00
Michael Raskin
41475012eb Merge pull request #25164 from marsam/master
Homogenize abc-verifier, dwm, osmctools homepages
2017-05-01 15:47:15 +02:00
Michael Raskin
49c419cf3e Merge pull request #25117 from lucas8/cubicle
cubicle: init at 1.0.2
2017-05-01 14:26:52 +02:00
Michael Raskin
7ef99bf054 Merge pull request #24085 from bcdarwin/ants
ants: set $ANTSPATH variable in shell scripts
2017-04-30 23:03:06 +02:00
Daiderd Jordan
5e3de3938e Merge pull request #25217 from LnL7/darwin-csdp
csdp: fix darwin build
2017-04-30 14:33:30 +02:00
Michael Raskin
ce9c7dd0d6 Merge pull request #21822 from rht/master
coq_HEAD: Update to the latest commit
2017-04-30 12:49:20 +02:00
Maximilian Bosch
b12f76ddd3 geogebra: 5-0-350-0 -> 5-0-355-0 (#25324) 2017-04-29 14:34:57 +01:00
Peter Hoeg
bf4710fa80 speedcrunch: allow building with qt 5.8 2017-04-28 08:41:58 +08:00
Daiderd Jordan
2bd39ab013
csdp: fix darwin build
the build sets CC=clang causing it to essentially ignore the cc wrapper
2017-04-27 20:55:09 +02:00
lucas8
eedc6799b6
cubicle: init at 1.0.2 2017-04-25 22:02:42 +02:00
Peter Simons
d16c38a260 R: update to version 3.4.0
The new version needs TZ configured to a value other than "UTC" for the test
suite to succeed. Otherwise, an assumption in "reg-tests-1d.R" won't hold that
expects

  d <- as.POSIXlt("2016-12-06"); d$zone <- 1; format(d)

to throw an error about an invalid time zone.
2017-04-24 15:39:08 +02:00
Mario Rodas
0e7b608ab0 abc-verifier: Add http url scheme to abc homepage 2017-04-23 18:45:36 -05:00
Nikolay Amiantov
13162b9ddb fritzing: 0.9.0b -> 0.9.3b
Fixes #24943.
2017-04-23 17:53:11 +03:00
Vladimír Čunát
9fc61d0db5
simgrid: fixup sandboxed build after update #24915 2017-04-16 14:15:32 +02:00
Sophia Gold
76b8ce3023 simgrid: 3.11.1 -> 3.15 2017-04-15 08:22:02 +02:00
Matthias Beyer
6239da6ade diamond: init at 0.8.36 2017-04-12 13:05:57 +02:00
Justin Bedő
c5015b77af platypus: fix platforms metadata (#24666) 2017-04-06 10:10:54 +01:00
Maximilian Bosch
1e295260e2
geogebra: 5-0-346-0 -> 5-0-350-0 2017-03-30 21:55:05 +02:00
Robin Gloster
b9948fedc6
ncbi_tools: mark as broken and remove -fPIC
PIC is used by default since 16.09
2017-03-30 16:23:34 +02:00
Robin Gloster
13ab07d95a
maxima-ecl: mark as broken 2017-03-30 16:23:34 +02:00
Robin Gloster
536b782450
libsingular: does not build on i686 2017-03-30 16:23:34 +02:00
Joachim F
e15b666f79 Merge pull request #24416 from Twey/redprl-2017-03-28
redprl: 2016-09-22 -> 2017-03-28
2017-03-30 14:02:10 +01:00
Robin Gloster
f87de53883
sage: mark as broken 2017-03-30 12:06:08 +02:00
James ‘Twey’ Kay
c54588d250 redprl: 2016-09-22 -> 2017-03-28 2017-03-28 21:02:30 +01:00
Vladimír Čunát
96d41e393d
treewide: purge maintainers.urkud
It's sad, but he's been inactive for the last five years.
Keeping such people in meta.maintainers is counter-productive.
2017-03-27 19:52:29 +02:00
Thomas Tuegel
299c842df2
qgroundcontrol: broken on Qt 5.6 2017-03-25 08:49:39 -05:00
Maximilian Bosch
9787b2b808
geogebra: 5-0-338-0 -> 5-0-346-0 2017-03-24 22:16:57 +01:00
Peter Hoeg
317734f99c speedcrunch: stick to qt 5.7 as 5.8 is broken 2017-03-25 00:39:30 +08:00
Ben Darwin
fbc9a4d7dc ants: set $ANTSPATH variable in shell scripts 2017-03-22 16:01:05 -04:00
Michael Raskin
47183c813e golly-beta: init at 2.9b2 to test GL issues 2017-03-22 17:02:55 +01:00
Franz Pletz
bfb7890fa0 Merge pull request #24191 from jbedo/bedtools
bedtools: fix clang build
2017-03-22 15:30:19 +01:00
Justin Bedo
56aeb271c9
bedtools: fix clang build 2017-03-22 12:00:24 +11:00
Dan Peebles
7ad3fd7ca7 neuron: fix on clang 3.8 and above
This is in preparation for upgrading Darwin stdenv to LLVM 4
2017-03-21 01:00:18 -04:00
Michael Raskin
4d5f33deff Merge pull request #23376 from bcdarwin/ants
ANTs: init at 2.1.0 (0gyys1lf) and update ITK accordingly
2017-03-18 18:42:24 +01:00
rht
bbd1c3d58a
coq_HEAD: Update once more 2017-03-18 01:51:38 +03:00
rht
7264efb5cb
Fold in specific ocaml version choice into let 2017-03-18 01:51:37 +03:00
rht
975d040f07
coq_HEAD: Update to the latest commit 2017-03-18 01:50:26 +03:00