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4115 Commits

Author SHA1 Message Date
Justin Bedo
6ce06dccfc
delly: 0.8.5 -> 0.8.6 2020-12-14 09:55:57 +11:00
Robert Scott
d81a6bb6f2 hal-hardware-analyzer: 2.0.0 -> 3.1.9 2020-12-11 22:37:04 +00:00
Mario Rodas
8006772a05
Merge pull request #106612 from alyssais/cedille 
cedille: 1.1.1 -> 1.1.2; fix build
 2020-12-11 07:37:18 -05:00
Jörg Thalheim
a1cacefde5
Merge pull request #106480 from SCOTT-HAMILTON/spdlog 2020-12-11 07:45:06 +00:00
Sandro
f1e3b5160e
Merge pull request #103338 from hjones2199/siril 2020-12-11 07:35:23 +01:00
Hunter Jones
69741a7a48 siril: init at 0.99.6 2020-12-11 00:07:30 -06:00
Alyssa Ross
8b8dfc5d40
cedille: 1.1.1 -> 1.1.2; fix build 2020-12-10 23:07:32 +00:00
R. RyanTM
aa2148eb1f picard-tools: 2.23.8 -> 2.23.9 2020-12-10 23:06:36 +00:00
SCOTT-HAMILTON
d98fae8072
Update pkgs/applications/science/electronics/hal-hardware-analyzer/default.nix 
Co-authored-by: Drew <drewrisinger@users.noreply.github.com>
 2020-12-10 16:35:46 +01:00
SCOTT-HAMILTON
ddf90cb942 spdlog: use nixpkgs' fmt instead of bundled one 2020-12-10 10:47:00 +01:00
markuskowa
ba5c6f6075
Merge pull request #105133 from markuskowa/fix-gromacs 
Gromacs: fix SIMD flags, and OpenMP
 2020-12-08 09:10:38 +01:00
R. RyanTM
cec747d712 clingo: 5.4.0 -> 5.4.1 2020-12-07 13:03:03 +00:00
Ben Gamari
c98ce627d4
kicad-unstable: 2020-11-07 -> 2020-12-01 (#105743) 2020-12-03 19:17:32 -05:00
R. RyanTM
b3f3197266 mavproxy: 1.8.27 -> 1.8.29 2020-12-03 14:33:38 +00:00
Sandro
30cdc8be48
Merge pull request #105650 from r-ryantm/auto-update/gretl 
gretl: 2020b -> 2020e
 2020-12-02 20:22:27 +01:00
Ryan Mulligan
4ce30eb63a
Merge pull request #105672 from r-ryantm/auto-update/hmmer 
hmmer: 3.3.1 -> 3.3.2
 2020-12-02 05:45:57 -08:00
Austin Seipp
e601758166
abc-verifier: 2020.06.22 -> 2020.11.24 
Signed-off-by: Austin Seipp <aseipp@pobox.com>
 2020-12-02 07:18:05 -06:00
Mario Rodas
d48bc3e815
Merge pull request #105654 from r-ryantm/auto-update/gmsh 
gmsh: 4.7.0 -> 4.7.1
 2020-12-02 05:15:45 -05:00
Austin Seipp
a3ae8a4fcf
Merge pull request #100750 from arcz/boolector 
boolector: enable darwin build
 2020-12-02 03:19:54 -06:00
R. RyanTM
6f50c5b18e hmmer: 3.3.1 -> 3.3.2 2020-12-02 09:00:15 +00:00
R. RyanTM
cf89444f1e gmsh: 4.7.0 -> 4.7.1 2020-12-02 05:50:47 +00:00
R. RyanTM
f9a694106b gretl: 2020b -> 2020e 2020-12-02 04:45:07 +00:00
Ben Darwin
ee7d83e648 ants: unbreak on Darwin 2020-12-01 14:17:54 -05:00
Markus Kowalewski
e90cff90f1
openmolcas: fix hash 2020-11-30 23:05:14 +01:00
Justin Bedo
5fc6258043
bwa: expand supported platforms 2020-11-30 09:46:51 +11:00
Artur Cygan
da3c0ca0dd boolector: fix darwin build 2020-11-29 22:31:54 +01:00
Artur Cygan
38e6f15d98 btor2tools: fix install_name on darwin 2020-11-29 22:31:31 +01:00
Vincent Laporte
8ee7c2505f proverif: install emacs mode 2020-11-29 14:05:14 +01:00
Sandro
4dc26ca31d
Merge pull request #92646 from r-ryantm/auto-update/tla-toolbox 
tlaplusToolbox: 1.6.0 -> 1.7.0
 2020-11-29 04:01:21 +01:00
Sandro
2c0389680c
Merge pull request #90075 from dmrauh/add/gretl 
gretl: init at 2020b
 2020-11-28 22:10:05 +01:00
Dominik Michael Rauh
5f10cd5e0b
gretl: init at 2020b 2020-11-28 21:37:30 +01:00
Doron Behar
56a2c8bb22
Merge pull request #104171 from freezeboy/unbreak-dsview-qt515 
dsview: 0.99 -> 1.12
 2020-11-28 17:55:25 +02:00
Timo Kaufmann
819a2c571a
Merge pull request #105212 from r-ryantm/auto-update/jmol 
jmol: 14.31.17 -> 14.31.18
 2020-11-28 10:46:52 +01:00
R. RyanTM
e5f757954a jmol: 14.31.17 -> 14.31.18 2020-11-28 06:51:19 +00:00
Sandro
85fe68bbc0
Merge pull request #105197 from r-ryantm/auto-update/igv 
igv: 2.8.12 -> 2.8.13
 2020-11-28 04:05:05 +01:00
R. RyanTM
212ba486d6 igv: 2.8.12 -> 2.8.13 2020-11-28 02:18:00 +00:00
Sandro
ec421ca248
Merge pull request #100532 from piegamesde/fix-desktopitems 
treewide: Fix broken desktop files and mark packages as broken
 2020-11-27 22:27:59 +01:00
Markus Kowalewski
58e1666a58
gromacs: fix SIMD flags, and OpenMP 
* make CPU acceleration selectable.
* update cmake flag for acceleration CPU_ACCELERATION -> SIMD
  GMX_CPU_ACCELERATION is outdated and has been ignored.
* add hwloc to inputs
* always build with OpenMP
* change name -> pname
 2020-11-27 13:59:01 +01:00
Michael Raskin
3ed321dfab z3: enable build on non-x86_64 unix; checked the build on aarch64-linux 2020-11-27 11:52:07 +01:00
Sandro
41408091bb
Merge pull request #105111 from r-ryantm/auto-update/workcraft 
workcraft: 3.3.1 -> 3.3.2
 2020-11-27 03:12:56 +01:00
R. RyanTM
b25018203b workcraft: 3.3.1 -> 3.3.2 2020-11-27 01:53:34 +00:00
Sandro
6ecdb286b0
Merge pull request #101464 from Synthetica9/redirected-urls 
treewide: ran ./maintainers/scripts/update_redirected_urls.sh
 2020-11-27 01:27:24 +01:00
Patrick Hilhorst
a6b3bb24e4
treewide: ran ./maintainers/scripts/update_redirected_urls.sh 2020-11-27 01:23:57 +01:00
Sandro
b08b773f24
Merge pull request #101807 from cheriimoya/pspp 
pspp 1.2.0 -> 1.4.1
 2020-11-27 00:35:16 +01:00
Gabriel Ebner
56ffa7a9e4
Merge pull request #105055 from r-ryantm/auto-update/qalculate-gtk 
qalculate-gtk: 3.14.0 -> 3.15.0
 2020-11-26 19:04:24 +01:00
R. RyanTM
8c1f644cc7 qalculate-gtk: 3.14.0 -> 3.15.0 2020-11-26 17:48:20 +00:00
Sandro
605ecee7de
Merge pull request #102200 from hjones2199/master 
phd2: init at 2.6.9dev1
 2020-11-26 02:28:06 +01:00
Sandro
c2d728f195
Merge pull request #102140 from SuperSandro2000/patch-2 2020-11-26 01:00:22 +01:00
Sandro
28cb61eb5d
Merge pull request #104933 from tadfisher/horizon-eda 
horizon-eda: 1.2.1 -> 1.3.0
 2020-11-26 00:45:09 +01:00
Sandro
d8b570e6c8
Merge pull request #98363 from jbedo/mosdepth 
mosdepth: 0.2.9 -> 0.3.1
 2020-11-25 23:55:47 +01:00
Sandro
e166f22759
tebreak: Fix tests 2020-11-25 21:36:38 +01:00
Sandro
5f2997686c
deeptools: Fix tests 2020-11-25 21:36:37 +01:00
Tad Fisher
40db868048
horizon-eda: 1.2.1 -> 1.3.0 2020-11-25 12:23:45 -08:00
Sandro
b73851877c
Merge pull request #104866 from r-ryantm/auto-update/MAVProxy 
mavproxy: 1.8.24 -> 1.8.27
 2020-11-25 17:42:18 +01:00
R. RyanTM
3174ae1723 mavproxy: 1.8.24 -> 1.8.27 2020-11-25 05:57:05 +00:00
Hunter Jones
d14952311e phd2: init at 2.6.9dev1 2020-11-24 21:31:58 -06:00
Sandro
ea49bac768
Merge pull request #99761 from fgaz/key/init 
key: init at 2.6.3
 2020-11-25 01:49:25 +01:00
Graham Christensen
bc49a0815a
utillinux: rename to util-linux 2020-11-24 12:42:06 -05:00
Sandro
3da89983fd
Merge pull request #103590 from r-ryantm/auto-update/workcraft 
workcraft: 3.3.0 -> 3.3.1
 2020-11-24 02:07:43 +01:00
Sandro
b3f5ff2005
Merge pull request #103703 from r-ryantm/auto-update/gmsh 
gmsh: 4.6.0 -> 4.7.0
 2020-11-24 01:57:36 +01:00
Timo Kaufmann
e4af85f1d8
Merge pull request #104476 from refnil/pynac 
pynac: use python3 instead of python2
 2020-11-23 22:26:38 +01:00
R. RyanTM
3b17793827 star: 2.7.5c -> 2.7.6a 2020-11-23 20:40:05 +01:00
Sandro
b2219a326b
Merge pull request #101922 from penguwin/nextinspace 
nextinspace: init at 1.0.6
 2020-11-23 20:09:09 +01:00
Ryan Mulligan
5417bf80f5
Merge pull request #104395 from r-ryantm/auto-update/MAVProxy 
mavproxy: 1.8.23 -> 1.8.24
 2020-11-21 19:42:33 -08:00
freezeboy
9950899236 xflr5: migrate to Qt5.15 
rewrite without wrapQtAppsHook and stdenv
 2020-11-20 22:24:19 +01:00
freezeboy
f2335a5d98 appcsxcad: migrate to Qt5.15 
* remove useless wrapQtAppsHook
 2020-11-20 22:24:18 +01:00
freezeboy
ed7a64c4ee qcsxcad: migrate to Qt511 + additional cleanup 
* Split into multiple outputs
 * Rewrite the derivation without stdenv
 2020-11-20 22:24:18 +01:00
Martin Lavoie
30afa507a3 pynac: use python3 instead of python2 2020-11-20 20:46:43 +01:00
R. RyanTM
4615d67ac6 mavproxy: 1.8.23 -> 1.8.24 2020-11-20 17:43:07 +00:00
Austin Seipp
00c451ad40
librepcb: touch ups, co-maintain 
Fixes a bug where the build system tried to call `git` to embed the
release tag revision into the binary, which isn't allowed. Easily fixed
with `substituteInPlace`.

Also updates the expression to be a little closer to "standard"
expressions (e.g. consistent indentation, importing `stdenv` instead of
`lib` and `mkDerivation`, etc.)

Signed-off-by: Austin Seipp <aseipp@pobox.com>
 2020-11-20 07:36:27 -06:00
R. RyanTM
26803925aa ngspice: 32 -> 33 2020-11-19 22:57:08 -08:00
Dmitry Kalinkin
209480e580
Merge pull request #104103 from veprbl/pr/snakemake_5_28_0 
snakemake: 5.19.3 -> 5.28.0
 2020-11-19 20:37:25 -05:00
Ben Gamari
7263f7c433
mathematica: Prefer building locally (#100856) 
There is little benefit to copying a 4GB tarball over the network,
just to perform an I/O-bound operation and then copy the
multi-gigabyte result back.
 2020-11-19 19:42:22 -05:00
Timo Kaufmann
e04721b289
Merge pull request #104083 from timokau/sage-maintainers-team 
maintainers: create sage team
 2020-11-19 19:20:49 +01:00
Jörg Thalheim
72f6df338d remove genesis maintainer 
genesis has no longer access to github
 2020-11-18 22:37:56 -08:00
R. RyanTM
5a4772e260 marvin: 20.19.0 -> 20.20.0 2020-11-18 21:03:39 +00:00
Timo Kaufmann
b7319d2d35 maintainers: add raskin to the sage team 
https://github.com/NixOS/nixpkgs/pull/104083#issuecomment-729168625
 2020-11-18 21:29:24 +01:00
Timo Kaufmann
ff8338343b maintainers: create sage team 
Maintaining all the packages whose updates might break some aspect of
sage.

For reference:
https://github.com/NixOS/nixpkgs/pull/103810#issuecomment-727536510
 2020-11-18 21:27:37 +01:00
freezeboy
00b385c612 dsview: 0.99 -> 1.12 
Adapted the patches and took a commit from upstream master branch to
allow the migration to Qt5.15.

Had to copy the patch because of the custom sourceRoot.
 2020-11-18 15:36:11 +01:00
Dmitry Kalinkin
68e06c19d6
snakemake: 5.19.3 -> 5.28.0 2020-11-17 17:37:35 -05:00
Nicolas Martin
9af958340a
nextinspace: init at 1.0.6 2020-11-17 15:41:53 +01:00
Oleksii Filonenko
512c3c0a05 maintainers: rename filalex77 -> Br1ght0ne 2020-11-17 13:09:31 +02:00
Ryan Mulligan
80b6df2a17
Merge pull request #103525 from r-ryantm/auto-update/samblaster 
samblaster: 0.1.24 -> 0.1.26
 2020-11-16 19:03:03 -08:00
Austin Seipp
4b21cf786c
Merge pull request #102943 from prusnak/verilog 
verilog: unstable-2020-08-24 -> 11.0
 2020-11-15 21:19:22 -06:00
Anderson Torres
25afd6a3ec
Merge pull request #103768 from AndersonTorres/wip-antiprism 
antiprism: init at 0.26
 2020-11-15 19:43:57 -03:00
Vincent Laporte
2806eb2743 coq_8_12: 8.12.0 → 8.12.1 2020-11-15 12:03:15 +01:00
Ryan Mulligan
47fe890182
Merge pull request #103751 from r-ryantm/auto-update/last 
last: 1133 -> 1145
 2020-11-14 15:08:46 -08:00
Ryan Mulligan
306960bf1c
Merge pull request #103776 from r-ryantm/auto-update/MAVProxy 
mavproxy: 1.8.22 -> 1.8.23
 2020-11-14 13:34:35 -08:00
Pavol Rusnak
610d337764
vhd2vl: fix compatibility with verilog 11.0 2020-11-14 20:15:09 +01:00
Pavol Rusnak
960b4816a5
verilog: unstable-2020-10-24 -> 11.0 2020-11-14 20:15:09 +01:00
R. RyanTM
e3cf6e12bc
fahcontrol: 7.6.13 -> 7.6.21 (#103677) 2020-11-14 16:39:37 +00:00
R. RyanTM
68f44d990d
fahviewer: 7.6.13 -> 7.6.21 (#103688) 2020-11-14 16:39:20 +00:00
Mario Rodas
7408e58969
Merge pull request #103731 from r-ryantm/auto-update/igv 
igv: 2.8.11 -> 2.8.12
 2020-11-14 06:31:47 -05:00
Timo Kaufmann
99aab4ff25
Merge pull request #103749 from r-ryantm/auto-update/jmol 
jmol: 14.31.14 -> 14.31.17
 2020-11-14 09:53:01 +01:00
Timo Kaufmann
9a18684661
Merge pull request #103706 from r-ryantm/auto-update/gp2c 
gp2c: 0.0.11pl4 -> 0.0.12
 2020-11-14 09:52:34 +01:00
R. RyanTM
df7db2b3ed mavproxy: 1.8.22 -> 1.8.23 2020-11-14 06:25:20 +00:00
AndersonTorres
f61b91cec4 antiprism: init at 0.26 2020-11-14 00:37:10 -03:00
R. RyanTM
a698dfa0a2 last: 1133 -> 1145 2020-11-13 23:30:53 +00:00
R. RyanTM
dd8591d752 jmol: 14.31.14 -> 14.31.17 2020-11-13 22:05:46 +00:00
R. RyanTM
82d1113013 igv: 2.8.11 -> 2.8.12 2020-11-13 18:25:51 +00:00
R. RyanTM
3457f85820 gp2c: 0.0.11pl4 -> 0.0.12 2020-11-13 14:37:53 +00:00
R. RyanTM
a36f37b778 gmsh: 4.6.0 -> 4.7.0 2020-11-13 14:19:59 +00:00
Austin Seipp
c1661fa7e1
magic-vlsi: 8.3.5 -> 8.3.80, co-maintain 
Signed-off-by: Austin Seipp <aseipp@pobox.com>
 2020-11-12 15:23:03 -06:00
Austin Seipp
58a906a7bf
iverilog: unstable-2020-08-24 -> unstable-2020-10-24 
Signed-off-by: Austin Seipp <aseipp@pobox.com>
 2020-11-12 15:23:02 -06:00
R. RyanTM
8acd7a3540 workcraft: 3.3.0 -> 3.3.1 2020-11-12 10:54:47 +00:00
R. RyanTM
d1baaef83d samblaster: 0.1.24 -> 0.1.26 2020-11-12 01:43:02 +00:00
R. RyanTM
f7485d07b5 lean: 3.21.0 -> 3.23.0 2020-11-11 15:16:44 -08:00
Gabriel Ebner
05d27ba19b
Merge pull request #103256 from r-ryantm/auto-update/qalculate-gtk 
qalculate-gtk: 3.13.0 -> 3.14.0
 2020-11-10 11:16:30 +01:00
R. RyanTM
3664e4929f qalculate-gtk: 3.13.0 -> 3.14.0 2020-11-10 01:49:59 +00:00
Frederik Rietdijk
20f001c01e Merge master into staging-next 2020-11-09 14:33:52 +01:00
Hunter Jones
5041cbc691 kstars: 2.9.8 -> 3.4.3 2020-11-09 12:21:31 +00:00
Luz
3bf8df2877 librepcb: 0.1.4 -> 0.1.5 2020-11-09 11:56:58 +00:00
Samuel Gräfenstein
22b73d1282 pkgs/*: add final newline to .nix files 2020-11-09 11:39:28 +00:00
Orivej Desh
0c75dfb732
convertall: init at 0.8.0 (#103108) 2020-11-09 01:45:09 +00:00
Masanori Ogino
88de0d7354
maxima: 5.42.2 -> 5.44.0 (#102861) 
Reference: https://sourceforge.net/p/maxima/code/ci/master/tree/ChangeLog-5.43.md
Reference: https://sourceforge.net/p/maxima/code/ci/master/tree/ChangeLog-5.44.md
Signed-off-by: Masanori Ogino <167209+omasanori@users.noreply.github.com>
 2020-11-08 19:29:53 -05:00
markuskowa
428bea042e
Merge pull request #102296 from r-ryantm/auto-update/gromacs 
gromacs: 2020.3 -> 2020.4
 2020-11-08 11:31:54 +01:00
Evils
a52e974cff kicad-unstable: 2020-10-09 -> 2020-11-07 
patch for issue 72248 no longer applies
  issue doesn't seem to occur without it anymore...
 2020-11-07 16:29:52 +01:00
Evils
905134a79f kicad: 5.1.7 -> 5.1.8 2020-11-07 16:29:52 +01:00
Evils
50ec961174 kicad: fix update.sh bootstrapping 
it will now correctly build a version.nix file from scratch
 2020-11-07 16:29:52 +01:00
Evils
756f36b554 kicad: 5.1.6 -> 5.1.7 2020-11-07 16:29:52 +01:00
Jan Tojnar
a821be7531
Merge branch 'master' into staging-next 2020-11-05 09:42:47 +01:00
Gabriel Ebner
8279979f38 lean: build olean files 2020-11-04 16:32:56 +01:00
Ryan Mulligan
ba3fc8bf47
Merge pull request #102707 from r-ryantm/auto-update/picard-tools 
picard-tools: 2.23.4 -> 2.23.8
 2020-11-04 06:11:08 -08:00
Frederik Rietdijk
10c57af49c Merge staging-next into staging 2020-11-04 09:28:07 +01:00
R. RyanTM
6391d3c1b5 picard-tools: 2.23.4 -> 2.23.8 2020-11-04 04:53:50 +00:00
Ryan Mulligan
4ee1f7bc2c
Merge pull request #102582 from r-ryantm/auto-update/marvin 
marvin: 20.17.0 -> 20.19.0
 2020-11-03 14:56:38 -08:00
Kevin Cox
d7a0daf2a1
Merge pull request #102420 from freezeboy/remove-plink 
plink: remove (broken since 2014)
 2020-11-03 07:49:09 -05:00
Frederik Rietdijk
470f05cb5d Merge staging-next into staging 2020-11-03 12:06:41 +01:00
R. RyanTM
aea6594c69 marvin: 20.17.0 -> 20.19.0 2020-11-03 04:38:29 +00:00
Mario Rodas
98bf2ceb68
Merge pull request #102464 from r-ryantm/auto-update/igv 
igv: 2.8.9 -> 2.8.11
 2020-11-02 18:21:36 -05:00
Timo Kaufmann
9560149052
Merge pull request #102479 from r-ryantm/auto-update/jmol 
jmol: 14.31.3 -> 14.31.14
 2020-11-02 19:31:29 +01:00
R. RyanTM
ccabae32dd gtkwave: 3.3.106 -> 3.3.107 2020-11-02 08:26:41 -08:00
R. RyanTM
41e1c236bf cytoscape: 3.8.1 -> 3.8.2 2020-11-02 08:20:13 -08:00
R. RyanTM
3d40283367 jmol: 14.31.3 -> 14.31.14 2020-11-02 12:07:07 +00:00
R. RyanTM
8ef46be2a4 igv: 2.8.9 -> 2.8.11 2020-11-02 10:16:32 +00:00
Pavol Rusnak
2c931312ce treewide: simplify rev/repo arguments in src 
+ use fetchFromGithub where possible
 2020-11-01 23:02:24 -08:00
freezeboy
1f7e201e9e plink: remove (broken since 2014) 2020-11-02 03:24:16 +01:00
R. RyanTM
036cec187c ginac: 1.7.9 -> 1.8.0 2020-11-01 17:19:05 -08:00
Frederik Rietdijk
83dde6c52c Merge staging-next into staging 2020-11-01 10:11:12 +01:00
R. RyanTM
afa6047e12 gromacs: 2020.3 -> 2020.4 2020-11-01 00:24:33 +00:00
Vincent Laporte
8cab21b48b Revert "coq: propagate and install ocaml and findlib" 
This reverts commit 5d0e2dedd5.
 2020-10-31 09:08:06 +01:00
Justin Bedo
32573f4b6e
last: 1066 -> 1133 2020-10-31 10:59:02 +11:00
Maximilian Bosch
952dc5c7ff
Merge pull request #101421 from sikmir/geogebra 
geogebra: 5-0-593-0 -> 5-0-609-0, geogebra6: 6-0-600-0 -> 6-0-609-0
 2020-10-30 23:39:37 +01:00
Renato Alves
6e19ed0a52
lumpy: 0.3.0 -> 0.3.1 2020-10-30 01:28:00 +01:00
Renato Alves
a28e5b0a4f
samtools: 1.10 -> 1.11 2020-10-29 18:27:22 +01:00
Andreas Rammhold
db0fe5c3eb
Merge branch master into staging to fix eval error 
This fixes the eval error of the small (and "big"?) NixOS test set that
was fixed in 1088f05 & eba8f542.
 2020-10-28 03:03:27 +01:00
Ben Siraphob
db74029e3e treewide: remove package names from prefix of descriptions 2020-10-27 09:15:07 -07:00
Max Hausch
8fb91897f4
pspp 1.2.0 -> 1.4.1 2020-10-27 01:10:37 +01:00
Masanori Ogino
40fb3ed6dc maxima: remove 5.41.0 
It had been kept for SageMath, but it uses the default version nowadays
and this version is not referenced in nixpkgs.

Signed-off-by: Masanori Ogino <167209+omasanori@users.noreply.github.com>
 2020-10-27 06:09:12 +09:00
Maximilian Bosch
61fa498994
Merge pull request #101646 from luc65r/pkg/rofi-calc 
rofi-calc: 1.8 -> 1.9
 2020-10-26 16:36:43 +01:00