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933 Commits

Author SHA1 Message Date
Austin Seipp
97e5b88d06 nixpkgs: abc-verifier 20150614 -> 20160813 
Signed-off-by: Austin Seipp <aseipp@pobox.com>
 2016-08-13 17:48:42 +00:00
Luca Bruno
27f294f38d Merge pull request #17589 from cmfwyp/sagemath 
sagemath: update mirrors, fix TeX Live dependency
 2016-08-12 21:58:41 +01:00
Robin Gloster
40d217b90e Merge pull request #17657 from matthewbauer/darwin-misc 
Darwin misc. fixes
 2016-08-11 16:41:34 +00:00
Michael Raskin
d1951974df golly: 2.7 -> 2.8 2016-08-11 17:57:35 +02:00
Michael Raskin
da4b7afea8 pari: 2.7.5 -> 2.7.6 2016-08-11 17:57:35 +02:00
Matthew Bauer
96322f6926 bcftools: fix darwin building 
gcc not available
 2016-08-10 22:48:19 -05:00
Matthew Bauer
ee63056476 aspino: patch to use c++ instead of g++ 2016-08-10 22:29:18 -05:00
Matthew Bauer
b3cb07e130 lie: only build on linux 
Darwin build fails from conflicts in libSystem:

In file included from altdom.c:1:
In file included from /private/var/folders/7t/4vz31njj37b8y_bg6z3t7tk00000gn/T/nix-build-LiE-2.2.2.drv-0/LiE/lie.h:34:
In file included from /nix/store/9ll4m9yx854hr64fn1w9ra3qimm3pzdk-Libsystem-osx-10.9.5/include/string.h:176:
/nix/store/9ll4m9yx854hr64fn1w9ra3qimm3pzdk-Libsystem-osx-10.9.5/include/strings.h:73:7: error: redefinition of 'index' as different kind of symbol
char    *index(const char *, int) __POSIX_C_DEPRECATED(200112L);
         ^
/private/var/folders/7t/4vz31njj37b8y_bg6z3t7tk00000gn/T/nix-build-LiE-2.2.2.drv-0/LiE/lie.h:6:14: note: previous definition is here
typedef long index;
             ^
1 error generated.
 2016-08-10 21:06:22 -05:00
Matthew Bauer
d4b1289592 lie: LiE -> lie 
Attributes need to be lowercase, see https://nixos.org/nixpkgs/manual/#sec-package-naming.
 2016-08-10 21:04:16 -05:00
obadz
8df7571bbc geogebra: don't build on hydra since derivation just unpacks jars 2016-08-10 14:35:14 +01:00
Mohammed Yaseen Mowzer
04f0cb86d0 geogebra: init at 5.0.265.0 
Closes #17400
 2016-08-10 14:32:09 +01:00
cmfwyp
179d992427
sage: fix TeX Live input 
The Sage derivation had texLive, the old TeX Live packaging which
is now marked as broken, as a build input. This replaces it by the
current TeX Live packaging.

However, the build remains broken. One of the problems can be
solved by patching the hashbangs at the beginning of build scripts,
but the build still gets stuck while building ncurses.
 2016-08-07 23:18:47 -04:00
Tuomas Tynkkynen
fdde95e096 msieve: Broken on i686 
http://hydra.nixos.org/build/38236222
 2016-08-06 17:06:45 +03:00
Tuomas Tynkkynen
f87f37c1ee bwa: Broken on i686 
http://hydra.nixos.org/build/38236956
 2016-08-06 17:06:45 +03:00
Erik Rybakken
37aff96daf ripser: init at 1.0 (#17481) 2016-08-04 10:21:48 +02:00
Tuomas Tynkkynen
21f17d69f6 treewide: Add lots of meta.platforms 
Build-tested on x86_64 Linux & Mac.
 2016-08-02 21:42:43 +03:00
Tuomas Tynkkynen
102ffa6be7 treewide: Wrap some really long package descriptions 2016-08-02 21:17:44 +03:00
Tuomas Tynkkynen
59ce911810 treewide: Some EOF-whitespace fixes 2016-08-02 21:17:44 +03:00
Tuomas Tynkkynen
1bf5ded193 treewide: Lots of meta.hydraPlatforms -> meta.platforms 
In all of these files, there is no meta.platforms but only
meta.hydraPlatforms, which doesn't seem to have any purpose except being
inconsistent.
 2016-08-02 21:17:44 +03:00
Robert Helgesson
8878e8ec05 leo2: remove use of builderDefsPackage (#17398) 2016-07-31 13:57:29 +02:00
Ram Kromberg
78d82f33ac alliance: 5.0 -> 5.1.1 (#17353) 2016-07-30 15:35:51 +01:00
Dmitry Kalinkin
4449ecb617 root: 6.04.16 -> 6.04.18 (#17265) 
root: compile against external gsl

Revert "Revert "root: enable parallel building""

This reverts commit ee1a10ee6b.

ROOT has no problems with parallel build. The problems that caused the
original commit were not related to parallel building.
 2016-07-30 01:41:37 +01:00
Robin Gloster
154af9e67d Merge pull request #9499 from khumba/scilab-bin-5 
scilab-bin: init at 5.5.2
 2016-07-28 16:43:08 +02:00
Marco Maggesi
c28eb6c2ba Update HOL Light to version 2016-07-23. 2016-07-28 15:56:20 +02:00
Bryan Gardiner
ed071594e5
scilab-bin: init at 5.5.2 
A built-from-source Scilab 5 package looks to be a lot more work, and some
dependencies are missing from Nixpkgs, but the binary version with bundled
dependencies works.
 2016-07-27 21:30:12 -07:00
Gabriel Ebner
f970bc67c7 lean: 20160117 -> 2016-07-05 
Fixes #17260.
 2016-07-27 11:01:45 +02:00
Gabriel Ebner
9082476478 cvc4: 1.4 -> 1.5pre-smtcomp2016 2016-07-24 13:11:17 +02:00
Robert Helgesson
1012508356 stellarium: 0.14.2 -> 0.14.3 2016-07-22 23:13:35 +02:00
Robert Helgesson
1bedecb4f9 stellarium: wrap binary using wrapQtProgram 
Fixes #13582 where Stellarium segfaults when starting.
 2016-07-22 22:21:17 +02:00
Gabriel Ebner
82f087944b metis-prover: 2.3.20160102 -> 2.3.20160713 2016-07-21 18:41:26 +02:00
Gabriel Ebner
530a9ab981 Merge remote-tracking branch 'vbgl/why3-0.87.1' 2016-07-18 13:33:50 +02:00
Ben Darwin
a896233396 jags: 3.4.0 -> 4.1.0 (#16804) 
* jags: 3.4.0 -> 4.1.0
* unbreak rjags and dependent packages
 2016-07-18 13:11:18 +02:00
vbgl
d7cfdc581c coq: 8.5pl1 -> 8.5pl2 (#16863) 2016-07-18 11:33:51 +02:00
Nikolay Amiantov
aefd8c420c Merge pull request #17043 from womfoo/fix/qmake4Hook-builds 
reintroduce qmake .pro files after qmake4Hook changes
 2016-07-18 00:11:24 +04:00
Kranium Gikos Mendoza
dd778f1756 fritzing: fix qmake4Hook build 
pass phoenix.pro and return unpack logic which were removed in 0b88755
 2016-07-17 22:40:27 +08:00
Joachim F
d9701350f9 Merge pull request #16951 from heilkn/lie 
LiE: include forgotten file INFO.a by installation
 2016-07-16 19:54:23 +02:00
Michael Raskin
61a3610853 tptp: 6.3.0 -> 6.4.0 2016-07-16 11:34:32 +02:00
Konstantin Heil
c0656fe0c1 LiE: include forgotten file INFO.a by installation 2016-07-14 14:18:57 +02:00
Konstantin Heil
b92c429799 LiE: init at 2.2.2 2016-06-30 21:04:41 +02:00
Vladimír Čunát
3afa246038 Merge branch 'staging' 
This includes a security update of expat.
 2016-06-29 07:47:04 +02:00
Austin Seipp
25bf4a5634 cryptoverif: init at 1.22 
Signed-off-by: Austin Seipp <aseipp@pobox.com>
 2016-06-28 04:37:29 +00:00
Austin Seipp
a69799c740 statverif: init at 1.86pl4 
Signed-off-by: Austin Seipp <aseipp@pobox.com>
 2016-06-28 04:36:11 +00:00
Austin Seipp
be19637b2a proverif: init at 1.94 
Signed-off-by: Austin Seipp <aseipp@pobox.com>
 2016-06-28 04:36:11 +00:00
Ta'iř sj Ořit
3832ebde8b gephi: init at 0.9.1 (#16071) 2016-06-26 22:40:00 +02:00
mimadrid
5c7a75412e
igv: init at 2.3.77 2016-06-26 19:27:56 +02:00
Joachim Fasting
46b07b335b Merge pull request #16379 from mimadrid/init/bcftools-1.3.1 
bcftools: init at 1.3.1
 2016-06-24 22:15:51 +02:00
mimadrid
d91d245f16
bcftools: init at 1.3.1 2016-06-24 21:08:17 +02:00
mimadrid
14feec44e4
samtools: refactoring 2016-06-24 21:08:17 +02:00
Vladimír Čunát
6b27ceb006 Merge 'master' into staging and re-revert merge 
... from staging to master, reverted temporarily in aa9a04883e.
 2016-06-23 12:09:03 +02:00
Vladimír Čunát
aa9a04883e Revert "Merge branch 'staging'" due to glibc 
The main output started to retain dependency on bootstrap-tools; see
https://github.com/NixOS/nixpkgs/pull/15867#issuecomment-227949096

This reverts commit c05d829598, reversing
changes made to f073df60d6.
 2016-06-23 09:25:10 +02:00