Dmitry Kalinkin
a1b8eb4a30
Merge pull request #144870 from fabaff/fix-cwltool
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cwltool: 3.1.20210628163208 -> 3.1.20211104071347
2021-11-11 23:41:46 -05:00
Felix Buehler
b52ab3b712
pkgs/applications: rename name to pname&version part 2
2021-11-07 14:53:06 +01:00
Fabian Affolter
18b531b514
cwltool: 3.1.20210628163208 -> 3.1.20211104071347
2021-11-06 13:01:16 +01:00
R. Ryantm
5ba5ff1a84
cytoscape: 3.8.2 -> 3.9.0
2021-10-29 09:08:26 +00:00
Dmitry Kalinkin
49d19b7945
snakemake: 6.7.0 -> 6.10.0
2021-10-24 17:49:14 -04:00
Vladimir Korolev
72d4a1f13d
openmodelica: v1.17.0 -> v1.18.0, add balodja to openmodelica maintainers
2021-10-02 12:39:57 +03:00
Robert Schütz
98c8fc6fd0
gplates: 2.2.0 -> 2.3.0
2021-09-26 23:11:29 -07:00
Dmitry Kalinkin
84f408f206
Merge pull request #136016 from veprbl/pr/root_6_24_04
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root: 6.24.02 -> 6.24.06
2021-09-15 11:35:07 -04:00
Dmitry Kalinkin
0ec2acf51f
root: build with -Dimt=ON
2021-09-03 12:41:16 -04:00
Dmitry Kalinkin
95b2d74bc5
root: re-enable unvendored LLVM
2021-09-03 12:41:16 -04:00
Dmitry Kalinkin
aedfb59c87
root: 6.24.02 -> 6.24.06
2021-09-03 12:41:04 -04:00
Dmitry Kalinkin
0a312a356c
root5: fix for gcc10
2021-09-01 07:14:56 -04:00
Dmitry Kalinkin
b8c5c06aab
snakemake: 6.6.1 -> 6.7.0
2021-08-28 02:18:38 -04:00
Dmitry Kalinkin
e51edc1e64
Merge pull request #130903 from veprbl/pr/cwltool
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cwltool: init at 3.1.20210628163208
2021-08-08 11:15:33 -04:00
Ben Siraphob
0f34985134
Merge pull request #122828 from balodja/openmodelica
2021-07-25 09:24:25 +07:00
Vladimir Korolev
5c8561f11a
openmodelica: 1.9.3 -> 1.17.0 with lots of changes
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Co-authored-by: Jaakko Luttinen <jaakko.luttinen@iki.fi>
Most of changes are:
* separate packages for different openmodelica components,
* qt4 -> qt5,
* patches to instruct the OMEdit wrapper with stdenv executables
location,
* adoption of #89731 and #109595 ,
* openblas -> blas, lapack according to #83888 ,
* parallel building,
* getting rid of spurious build phases,
* correct the license,
* cross-compilation,
* forcing compiler to clang++ according to OM build recommendations,
* drop of pangox_compat according to #75909 and #76412 ,
* better dependencies, and more.
2021-07-24 20:29:26 +03:00
Dmitry Kalinkin
3f24366cda
cwltool: init at 3.1.20210628163208
2021-07-21 22:11:17 -04:00
Sandro
d06f7e07a6
Merge pull request #130925 from SuperSandro2000/python-aliases
2021-07-22 03:21:11 +02:00
Sandro Jäckel
b4099137b1
pythonPackages: deprecate ConfigArgParse alias
2021-07-21 13:32:54 +02:00
Sandro
aee461ddb4
toil: update homepage
2021-07-21 13:28:37 +02:00
Dmitry Kalinkin
866fe59150
toil: init at 5.4.0
2021-07-20 22:18:08 -04:00
Dmitry Kalinkin
3a79b1fece
snakemake: 6.5.3 -> 6.6.1
2021-07-19 16:22:36 -04:00
Dmitry Kalinkin
a93f2af20b
snakemake: add missing optional dependenices
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These are needed to generate reports
2021-07-19 16:19:27 -04:00
Millian Poquet
c6f34aeaef
simgrid: compile tests in parallel
2021-07-19 14:05:17 +02:00
Millian Poquet
c4ec6ffb78
simgrid: fix paths in smpicc/smpicxx
2021-07-19 14:04:57 +02:00
Millian Poquet
33f915f241
simgrid: propagate boost
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Since SimGrid include files directly include boost files,
most SimGrid users need boost as well.
2021-07-19 14:03:50 +02:00
Millian Poquet
2d05c2d535
simgrid: 3.27 -> 3.28
2021-07-19 14:01:30 +02:00
Felix Buehler
82cb33a0ae
treewide: remove meta.version
2021-07-18 00:07:38 +02:00
Dmitry Kalinkin
1cbb9c64d1
root,root5: apply nixpkgs-fmt
2021-07-14 16:23:09 -04:00
Dmitry Kalinkin
62ab958fb0
root: 6.24.00 -> 6.24.02
2021-07-14 14:58:15 -04:00
Dmitry Kalinkin
45bed6d99f
snakemake: 6.5.0 -> 6.5.3
2021-07-11 10:40:09 -04:00
Andrew Childs
55dcd99859
root: use pure CoreSymbolication on Darwin
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The current build works by linking against CoreSymbolication in
/System/Library/PrivateFrameworks. This is impure and doesn't work in
newer versions of macOS.
See https://github.com/NixOS/nixpkgs/issues/128576
2021-06-29 11:00:05 +09:00
Dmitry Kalinkin
e3678ae8a6
snakemake: 6.0.5 -> 6.5.0
2021-06-24 11:36:26 -04:00
Sandro
47480918a5
Merge pull request #125802 from yipengsun/root-6-24-00
2021-06-09 15:42:05 +02:00
Yipeng Sun
ffced8d681
root: 6.22.08 -> 6.24.00
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We switched to the bundled llvm-clang combo because to use the llvm
provided in nixpkgs, clang also needs to be patched and built
externally, which is too much trouble.
2021-06-09 14:06:13 +02:00
Sandro
c037394f5f
Merge pull request #117606 from bgamari/graphia
2021-06-05 16:31:10 +02:00
Ben Gamari
dcfaa98677
graphia: init at 2.2
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Graphia is a relatively new tool for graph visualisation and analysis,
in the same vain as gephi.
2021-06-02 09:07:32 -04:00
Sandro Jäckel
d6ff646b3f
pythonPackages.smart_open: rename to smart-open
2021-05-22 15:02:50 -07:00
Stéphan Kochen
7e9451ffb3
rink: fix darwin build ( #123501 )
2021-05-18 10:34:25 -04:00
Jonathan Ringer
1d85caaa26
root: fix build
2021-05-08 01:29:18 -07:00
V
5a835e6e92
rink: 0.6.0 -> 0.6.1
2021-05-01 10:46:51 +02:00
Fabian Affolter
e4149e6e0b
rink: specify license
2021-04-11 23:18:32 +02:00
R. RyanTM
12518ff683
rink: 0.5.1 -> 0.6.0
2021-04-11 14:49:45 +00:00
Dmitry Kalinkin
1d93243467
root: 6.22.06 -> 6.22.08
2021-04-06 02:41:06 -04:00
Sandro Jäckel
3453b89f4b
lzma: deprecate alias
2021-04-04 19:49:52 +02:00
Millian Poquet
99a5de6ebc
simgrid: 3.26 -> 3.27
2021-03-29 21:20:27 +02:00
Dmitry Kalinkin
8887f4655e
snakemake: 5.28.0 -> 6.0.5
2021-03-26 18:32:26 -04:00
Ben Siraphob
e03c068af5
treewide: makeWrapper buildInputs to nativeBuildInputs
2021-02-19 20:09:16 +07:00
Sandro Jäckel
6ad10c3bcd
treewide: Remove doBuild cause it does not exist
2021-02-02 14:46:06 +01:00
Pavol Rusnak
a6ce00c50c
treewide: remove stdenv where not needed
2021-01-25 18:31:47 +01:00
