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154 Commits

Author SHA1 Message Date
Frederik Rietdijk
183cada05a Merge pull request #25590 from mimadrid/update/cytoscape-3.5.1 
cytoscape: 3.4.0 -> 3.5.1
 2017-05-09 10:03:20 +02:00
mimadrid
0ed5b1c867
cytoscape: 3.4.0 -> 3.5.1 2017-05-07 23:05:59 +02:00
Matthew Daiter
c6385eb0f5 openmvg: init at v1.1 2017-05-05 15:51:32 +02:00
Dmitry Kalinkin
be9c0e8b7e
root: 6.08.02 -> 6.09.02 
This also fixes breakage on darwin due to LLVM4.0 migration.

I had to enable opengl because otherwise macOS build is broken.
See root commit 23f8871c7 ('Do not include OpenGL directly but use our
TGLIncludes for that purpose.')

I've enabled xml because TUnfold depends on it.
 2017-04-26 16:34:14 -04:00
Vladimír Čunát
9fc61d0db5
simgrid: fixup sandboxed build after update #24915 2017-04-16 14:15:32 +02:00
Sophia Gold
76b8ce3023 simgrid: 3.11.1 -> 3.15 2017-04-15 08:22:02 +02:00
Michael Raskin
47183c813e golly-beta: init at 2.9b2 to test GL issues 2017-03-22 17:02:55 +01:00
Ricardo Ardissone
e17d3d4ef1 gplates: use boost 160 
update 161 changed reference parameters for optional
https://hydra.nixos.org/build/49707856/nixlog/1
http://www.boost.org/doc/libs/1_61_0/libs/optional/doc/html/boost_ooptional/relnotes.html
 2017-03-08 13:04:34 +02:00
Robin Gloster
bb9a37a2a5
ikarus: remove 
unmaintained, only works on 32 bit
 2017-03-03 13:43:04 +01:00
Benno Fünfstück
253d736398 boinc: fix location of /etc in $out 
Looks like the latest version no longer requires the patch, and the patch instead resulted in
/etc files being installed to `$out/$out/etc` instead of `$out/etc`
 2017-03-03 12:58:43 +01:00
Robin Gloster
c1866cade9
libsForQt5.qmltermwidget: fix build 2017-03-02 14:13:35 +01:00
Katona László
085502dd80 cytoscape: fixed issue with startup script 2017-03-01 21:46:49 +01:00
Frederik Rietdijk
2832472da0 golly: use python2 2017-02-10 09:35:10 +01:00
Daiderd Jordan
5a67b130b9
Merge branch 'master' into staging 2017-01-02 00:54:17 +01:00
Dmitry Kalinkin
c7bcb99ff2
root: 6.04.18 -> 6.08.02 
This relies on
e9d60c56 ('libc++3.7: fix to use with modern compilers')
 2017-01-01 17:52:03 -05:00
Pascal Wittmann
039e90c9d3
fityk: 1.3.0 -> 1.3.1 2017-01-01 18:19:39 +01:00
Ricardo Ardissone
662aa495df gplates: init at 2.0.0 2016-12-16 22:29:53 -02:00
Dmitry Kalinkin
9434ec5441
root: fix environment setup 
1) s/envHook/postHook/
2) patch to not set $p that fixes nested ```nix-shell -p root``` calls
 2016-10-29 14:47:32 -04:00
Vladimír Čunát
4328629bf8 treewide: fix meta evaluation 
There is no `stdenv.maintainers`. /cc @veprbl.
 2016-10-22 12:05:23 +02:00
Dmitry Kalinkin
ef96b48659
root: s/python/python2/ 2016-10-21 15:47:38 -04:00
Dmitry Kalinkin
59a8aff8e6
root: add veprbl to maintainers 2016-10-21 13:30:30 -04:00
Joachim F
e22dd2f6c5 Merge pull request #18740 from chris-martin/tulip-4-9 
Tulip: 4.1.0 -> 4.9.0
 2016-09-20 14:34:17 +02:00
Chris Martin
08e5949235 tulip: 4.1.0 -> 4.9.0 2016-09-18 15:24:29 -04:00
Dmitry Kalinkin
7b9deaba81 root: add setup-hook 2016-09-18 04:45:18 -04:00
Nikolay Amiantov
4748709926 Merge commit 'refs/pull/18498/head' of git://github.com/NixOS/nixpkgs 2016-09-13 12:51:34 +03:00
Kirill Boltaev
bccd75094f treewide: explicitly specify gtk and related package versions 2016-09-12 18:26:06 +03:00
Dmitry Kalinkin
5646c2aba6 root: add support for x86_64-darwin 
1) add pcre dependency (for some reason builtin_pcre doesn't work)
2) Disable dependencies that are currently not supported by the
expression.  Most users should not need those. These are disabled to
prevent cmake from picking them up from system and causing impurities.
Once there is a user who needs these they will have to update the
expression.
3) disable some OSX detection code that relies on /usr/bin/sw_vers
that chooses c++ library, silences warnings and sets macosx-version-min.
macosx-version-min is already set by nix using MACOSX_DEPLOYMENT_TARGET
environment variable.
 2016-09-11 17:29:13 -04:00
Domen Kožar
9e363a752f openmodelica: enable parallel building 
(cherry picked from commit 261d51971a352cbcdc8d70dc74f8971ac202a43d)
Signed-off-by: Domen Kožar <domen@dev.si>
 2016-09-05 18:06:28 +02:00
Tuomas Tynkkynen
b87a2245b1 root: Fix libc dev reference 2016-08-31 12:54:28 +03:00
Robin Gloster
9f80e55428
openmodelica: disable format hardening 2016-08-27 21:54:17 +00:00
Michael Raskin
14736fcf4c openmodelica: fix libgfortran.so search 2016-08-20 21:52:21 +02:00
Michael Raskin
d1951974df golly: 2.7 -> 2.8 2016-08-11 17:57:35 +02:00
Tuomas Tynkkynen
21f17d69f6 treewide: Add lots of meta.platforms 
Build-tested on x86_64 Linux & Mac.
 2016-08-02 21:42:43 +03:00
Dmitry Kalinkin
4449ecb617 root: 6.04.16 -> 6.04.18 (#17265) 
root: compile against external gsl

Revert "Revert "root: enable parallel building""

This reverts commit ee1a10ee6b.

ROOT has no problems with parallel build. The problems that caused the
original commit were not related to parallel building.
 2016-07-30 01:41:37 +01:00
Ta'iř sj Ořit
3832ebde8b gephi: init at 0.9.1 (#16071) 2016-06-26 22:40:00 +02:00
mimadrid
9b7a53d9cb
cytoscape: init at 3.4.0 
Closes #16197
 2016-06-16 15:47:21 +02:00
Tuomas Tynkkynen
f1d83444a5 openmodelica: Use makeLibraryPath 2016-06-07 21:18:02 +03:00
Tuomas Tynkkynen
bac26e08db Fix lots of fetchgit hashes (fallout from #15469) 2016-06-03 17:17:08 +03:00
Vladimír Čunát
ee1a10ee6b Revert "root: enable parallel building" 
This reverts commit 2991fdca52.
Hydra builds often report missing various files.
 2016-05-26 16:27:59 +02:00
Nicolò Balzarotti
c1c0c99af3 yarp: 2.3.64 -> 2.3.65 (#15662) 2016-05-24 13:30:52 +02:00
Dmitry Kalinkin
088601cb51 root: fix chrooted build, workaround 491f7f017c (cmake: set LIBDIR and INCLUDEDIR for multiple outputs) 2016-04-25 17:38:19 -04:00
Dmitry Kalinkin
f2200369e5 root: fix NixOS build, build with lzma from nix, update homepage url 2016-04-20 01:41:46 -04:00
Dmitry Kalinkin
baded4ea96 root: 5.34.15 -> 6.04.16 2016-04-17 22:59:31 -04:00
Lancelot SIX
8f4a7d6c4c pkgs.motuclient: move application away from pythonPackages 2016-03-02 09:41:02 +01:00
=
a5ed58445f yarp (+ libace): init at 2.3.64 2016-02-24 22:08:29 +01:00
Vladimír Čunát
88c9f8b574 xlibs: replace occurrences by xorg 
This seems to have been confusing people, using both xlibs and xorg, etc.
- Avoided renaming local (and different) xlibs binding in gcc*.
- Fixed cases where both xorg and xlibs were used.
Hopefully everything still works as before.
 2015-09-15 12:54:34 +02:00
Vladimír Čunát
a839a48b0a root: fix build by -lX11 
The pkgconfig change didn't help, but I'd leave it in.
 2015-09-01 08:23:00 +02:00
lethalman
8230f0a379 Merge pull request #8908 from devhell/boinc 
boinc: 7.4.14 -> 7.4.42
 2015-07-30 18:52:34 +02:00
devhell
8d41ccf6f9 boinc: 7.4.14 -> 7.4.42 
As it turns out BOINC moved their git repository to Github sometime
shortly after the first update to this derivation. Their wiki change
makes this quite clear:
https://boinc.berkeley.edu/trac/wiki/SourceCodeGit?action=diff&version=54

Slight refactor and the changelog for this release can be found here:
https://boinc.berkeley.edu/trac/wiki/VersionHistory

Build and run were successful.
 2015-07-28 22:01:26 +01:00
Sergey Mironov
80d6b708ac openmodelica: Fix runtime PATHs using wrapProgram, fixes #8949 2015-07-23 20:42:42 +02:00
Sergey Mironov
9bb0fee487 openmodelica: add expression 
openmodelica.nix: add git to the list of dependencies

openmodelica: generate library sourcelist with hashes

openmodelica: generate library sources (part 2)

openmodelica: fix fakegit

openmodelica: fix libraries issues

openmodelica: add GTK

openmodelica: successful build
 2015-07-23 20:42:35 +02:00
Pascal Wittmann
cf13409313 fityk: update 1.2.9 to 1.3.0 2015-06-24 11:15:44 +02:00
Michael Raskin
59126fb3f8 Update golly 2015-06-14 11:22:07 +03:00
Ludovic Courtès
41b53577a8 unmaintain a bunch of packages 2015-01-13 22:33:49 +01:00
Vladimír Čunát
7ce485ff0f root: fix build by upstream patch 
Also refactor the expression a little.
 2014-12-10 13:03:01 +01:00
Michael Raskin
98878bc5a0 Link Golly against libperl and libpython so it finds them in runtime 2014-11-10 12:31:29 +03:00
Mateusz Kowalczyk
57a84615c6 vite: fix and update package 2014-11-09 12:59:51 +00:00
Mateusz Kowalczyk
007f80c1d0 Turn more licenses into lib.licenses style 
Should eval cleanly, as far as -A tarball tells me.

Relevant: issue #2999, issue #739
 2014-11-06 00:48:16 +00:00
Michael Raskin
9ae10b2cac Update golly 2014-09-24 14:07:00 +04:00
Pascal Wittmann
038c71a11a boinc: update from 7.2.42 to 7.4.14 (fixes CVE-2013-2298) 2014-09-01 22:51:04 +02:00
Bjørn Forsman
c9baba9212 Fix many package descriptions 
(My OCD kicked in today...)

Remove repeated package names, capitalize first word, remove trailing
periods and move overlong descriptions to longDescription.

I also simplified some descriptions as well, when they were particularly
long or technical, often based on Arch Linux' package descriptions.

I've tried to stay away from generated expressions (and I think I
succeeded).

Some specifics worth mentioning:
 * cron, has "Vixie Cron" in its description. The "Vixie" part is not
   mentioned anywhere else. I kept it in a parenthesis at the end of the
   description.

 * ctags description started with "Exuberant Ctags ...", and the
   "exuberant" part is not mentioned elsewhere. Kept it in a parenthesis
   at the end of description.

 * nix has the description "The Nix Deployment System". Since that
   doesn't really say much what it is/does (especially after removing
   the package name!), I changed that to "Powerful package manager that
   makes package management reliable and reproducible" (borrowed from
   nixos.org).

 * Tons of "GNU Foo, Foo is a [the important bits]" descriptions
   is changed to just [the important bits]. If the package name doesn't
   contain GNU I don't think it's needed to say it in the description
   either.
 2014-08-24 22:31:37 +02:00
Thomas Strobel
58b4b98377 Add application for scientific data analysis: fityk 2014-08-14 01:57:27 +02:00
Michael Raskin
cee539cc9c Allow optional functionality in SimGrid 2014-08-12 14:09:54 +04:00
Michael Raskin
2e84472d60 Update SimGrid 2014-08-12 05:26:33 +04:00
Eelco Dolstra
8a7f3c3618 Mark a bunch of packages as broken or not supported on Darwin 2014-08-08 17:59:02 +02:00
Peter Simons
d0ca8c237e Fix broken license references. 2014-07-28 11:43:20 +02:00
Mateusz Kowalczyk
7a45996233 Turn some license strings into lib.licenses values 2014-07-28 11:31:14 +02:00
Michael Raskin
01d9778625 Update boinc 2014-07-04 22:18:49 +04:00
Eric Kow
9e457049e4 megam: New package 
Maximum Entropy (GA) Model Optimization Package
 2014-04-15 14:00:56 +01:00
Peter Simons
19cb32a36c root: update from 5.34.14 to 5.34.15 2014-03-03 11:10:25 +01:00
Peter Simons
2991fdca52 root: enable parallel building 2014-01-20 18:26:32 +01:00
Peter Simons
baeb19d0ce root: clean up meta section and move build into 'science/misc' section 2014-01-20 18:24:27 +01:00
Eelco Dolstra
a0e21fd1ca Mark more packages as broken 2013-11-04 21:11:00 +01:00
Ludovic Courtès
2e937c437a unmaintain several packages 2013-08-16 23:45:01 +02:00
Evgeny Egorochkin
74491ea24b boinc: fix url 2013-07-19 08:25:00 +03:00
Evgeny Egorochkin
d26e46acd6 golly: fix version to match tarball. this time for sure :) 2013-07-18 03:55:56 +03:00
Evgeny Egorochkin
d0b4c8bfaa gktspell: version bump to 2.0.16 because the old one has disappeared 2013-07-14 03:09:34 +03:00
Evgeny Egorochkin
33dac78323 golly: fix version to match tarball 2013-07-14 02:08:49 +03:00
Vladimír Čunát
0d72174dbd Merge branch stdenv-updates into x-updates 
x-updates is supposed to merge after stdenv-updates, so let's test it

Conflicts:
	pkgs/development/libraries/gtk+/2.x.nix (both updated, taking newer)
	pkgs/development/libraries/mesa/default.nix (taking nativeBuildInputs)
 2013-02-21 12:43:00 +01:00
Vladimír Čunát
c55f5ae19d tulip: update to fix compilation with libpng-1.6 2013-02-16 16:16:32 +01:00
Peter Simons
b33ad366a1 Merge branch 'master' into stdenv-updates. 2013-01-11 15:46:10 +01:00
Lluís Batlle i Rossell
430957b020 boinc: fix it; the binaries didn't start. 2013-01-08 23:28:39 +01:00
Lluís Batlle i Rossell
8de96cb04d boinc: updating to 7.0.44 
now it builds.

I started to use fetchgit instead of fetchsvn, because the upstream
doc pages talk about git more than svn.
 2013-01-08 23:28:39 +01:00
Eelco Dolstra
ab3eeabfed Rename buildNativeInputs -> nativeBuildInputs 
Likewise for propagatedBuildNativeInputs, etc.  "buildNativeInputs"
sounds like an imperative rather than a noun phrase.
 2012-12-28 19:20:09 +01:00
Michael Raskin
8a1f312621 Update golly 2012-12-04 10:10:28 +04:00
Michael Raskin
e6fa414b64 Update and fix Tulip 
svn path=/nixpkgs/trunk/; revision=32613
 2012-02-27 07:10:05 +00:00
Yury G. Kudryashov
7e320a7043 State qt version (3/4) in packages, not in all-packages.nix 
svn path=/nixpkgs/trunk/; revision=31406
 2012-01-07 17:06:49 +00:00
Yury G. Kudryashov
995d3d3e03 tulip-3.6.1 
svn path=/nixpkgs/trunk/; revision=31216
 2012-01-02 18:36:04 +00:00
Michael Raskin
d5c702939c Update Golly 
svn path=/nixpkgs/trunk/; revision=30874
 2011-12-13 21:00:42 +00:00
Lluís Batlle i Rossell
58e9385e70 Downgrading boinc to the last stable version. 
svn path=/nixpkgs/trunk/; revision=29808
 2011-10-13 08:58:45 +00:00
Lluís Batlle i Rossell
c67c7d49b0 Boinc wanted to be told to link to libX11 
svn path=/nixpkgs/trunk/; revision=29713
 2011-10-07 19:01:27 +00:00
Lluís Batlle i Rossell
80d397413d Boinc can even run, but only if placed in the proper (writeable) path. 
svn path=/nixpkgs/trunk/; revision=29712
 2011-10-07 19:01:19 +00:00
Lluís Batlle i Rossell
fefaa7a6ea Adding boinc. It installs. I don't know how to use it. 
svn path=/nixpkgs/trunk/; revision=29704
 2011-10-06 20:25:05 +00:00
Michael Raskin
b973f98afa Make tulip run without hassle. Unfortunately, some operations repeatably crash tulip even when built vs Qt4.6 
svn path=/nixpkgs/trunk/; revision=27570
 2011-07-01 09:53:11 +00:00
Michael Raskin
a4be010d31 Update Tulip 
svn path=/nixpkgs/trunk/; revision=27566
 2011-07-01 07:01:46 +00:00
Ludovic Courtès
e60ba9135a SimGrid 3.5. 
svn path=/nixpkgs/branches/stdenv-updates/; revision=25180
 2010-12-17 17:48:12 +00:00
Ludovic Courtès
35cbabdab4 ViTE from SVN. 
svn path=/nixpkgs/trunk/; revision=22696
 2010-07-22 09:01:42 +00:00
Michael Raskin
b1eb6c96a8 Update Tulip. Unicode support should be available now. 
svn path=/nixpkgs/trunk/; revision=22484
 2010-07-06 07:25:07 +00:00
Michael Raskin
a10b9e1d3a Specifying golly license 
svn path=/nixpkgs/trunk/; revision=22393
 2010-06-23 10:02:44 +00:00
Michael Raskin
558251da4a Adding golly (a cellular automata program) 
svn path=/nixpkgs/trunk/; revision=22391
 2010-06-23 07:41:17 +00:00