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4135 Commits

Author SHA1 Message Date
Pavol Rusnak
90f7338112
treewide: stdenv.lib -> lib 2021-01-24 01:49:49 +01:00
Markus Kowalewski
6dba41fbcb
mpi: use mpi attribute consistently as the default MPI implementations 
Use the attribute mpi to provide a system wide default MPI
implementation. The default is openmpi (as before).
This now allows for overriding the MPI implentation by using
the overlay mechanism. Build all packages with mpich instead
of the default openmpi can now be achived like this:
self: super:
 {
   mpi = super.mpich;
 }

All derivations that have been using "mpi ? null" to provide optional
building with MPI have been change in the following way to allow for
optional builds with MPI:
{ ...
, mpi
, useMpi ? false
}
 2021-01-23 12:15:13 +01:00
sternenseemann
9212e03c13 acgtk: use dune install 2021-01-21 11:26:26 +01:00
Ryan Mulligan
33784b7228
Merge pull request #110086 from r-ryantm/auto-update/marvin 
marvin: 20.20.0 -> 20.21.0
 2021-01-20 23:38:00 -08:00
zowoq
932941b79c treewide: editorconfig fixes 
- remove trailing whitespace
- use spaces for indentation
 2021-01-21 13:29:54 +10:00
R. RyanTM
427bbe059a picard-tools: 2.23.9 -> 2.24.0 2021-01-20 20:42:01 +00:00
R. RyanTM
26dba9209f marvin: 20.20.0 -> 20.21.0 2021-01-20 05:27:37 +00:00
zowoq
759a2cd563 ecopcr: use spaces for indentation 2021-01-20 10:53:10 +10:00
zowoq
31f5dd3f36 treewide: editorconfig fixes 
- remove trailing whitespace
- use spaces for indentation
 2021-01-20 09:11:11 +10:00
R. RyanTM
5eeafdb3ad kstars: 3.5.0 -> 3.5.1 2021-01-19 18:56:23 +00:00
Jonathan Ringer
9bb3fccb5b treewide: pkgs.pkgconfig -> pkgs.pkg-config, move pkgconfig to alias.nix 
continuation of #109595

pkgconfig was aliased in 2018, however, it remained in
all-packages.nix due to its wide usage. This cleans
up the remaining references to pkgs.pkgsconfig and
moves the entry to aliases.nix.

python3Packages.pkgconfig remained unchanged because
it's the canonical name of the upstream package
on pypi.
 2021-01-19 01:16:25 -08:00
Jonathan Ringer
200bb8c977 cd-hit: remove non-existent package 2021-01-19 01:16:25 -08:00
Sandro
ed2dbbba22
Merge pull request #109771 from r-ryantm/auto-update/delly 
delly: 0.8.6 -> 0.8.7
 2021-01-18 17:36:01 +01:00
R. RyanTM
e776f923e4 elan: 0.10.2 -> 0.10.3 2021-01-18 15:20:28 +00:00
R. RyanTM
a0e1bb6a4b delly: 0.8.6 -> 0.8.7 2021-01-18 14:22:30 +00:00
Sandro
0b6f223eec
Merge pull request #104756 from Mazurel/qucs-s 
qucs-s: init at 0.0.22
 2021-01-18 01:30:34 +01:00
Sandro
fe2882e5d3
Merge pull request #107845 from danielbarter/openbabel3 2021-01-18 00:37:32 +01:00
Sandro Jäckel
197eace081
avogadro: update maintainers 2021-01-18 00:21:49 +01:00
Mauricio Scheffer
f8b69fa6d2 starspace: init at unstable-2021-01-17 2021-01-17 21:31:55 +00:00
Ben Siraphob
badf51221d treewide: stdenv.lib -> lib 2021-01-16 17:58:11 +07:00
yangm2
c7ebdc8123
verilator: 4.100 -> 4.108 
Co-authored-by: Austin Seipp <aseipp@pobox.com>
Signed-off-by: Austin Seipp <aseipp@pobox.com>
 2021-01-15 21:10:37 -06:00
Sandro
403ea9f27c
Merge pull request #97101 from fricklerhandwerk/wxpython 2021-01-15 10:30:05 +01:00
Michael Raskin
d714c53f17
fix mis-merge 2021-01-14 15:26:10 +00:00
Michael Raskin
f2210b7287
Merge branch 'master' into remove-opensmt 2021-01-14 14:22:22 +00:00
fricklerhandwerk
bb2879d593 mavproxy: fix darwin build 2021-01-14 09:26:12 +01:00
Sandro Jäckel
55444ed07f
nasc: Fix compilation with gcc10 2021-01-11 12:08:20 +01:00
Profpatsch
4a7f99d55d treewide: with stdenv.lib; in meta -> with lib; 
Part of: https://github.com/NixOS/nixpkgs/issues/108938

meta = with stdenv.lib;

is a widely used pattern. We want to slowly remove
the `stdenv.lib` indirection and encourage people
to use `lib` directly. Thus let’s start with the meta
field.

This used a rewriting script to mostly automatically
replace all occurances of this pattern, and add the
`lib` argument to the package header if it doesn’t
exist yet.

The script in its current form is available at
https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
 2021-01-11 10:38:22 +01:00
Jan Tojnar
dd72357155
Merge branch 'master' into staging-next 2021-01-10 23:24:33 +01:00
John Ericson
05b5b5491e
Merge pull request #108507 from Ericson2314/ott-mode 
ott-mode: Factor our from ott
 2021-01-10 14:30:59 -05:00
github-actions[bot]
433c7b069c
Merge master into staging-next 2021-01-10 01:03:35 +00:00
Markus Kowalewski
14caa4b2bf
octopus: 10.0 -> 10.3 2021-01-09 16:32:49 +01:00
Markus Kowalewski
0961d5b998
octopus: update licenses 2021-01-09 16:32:49 +01:00
Michael Weiss
8ae8602bf7
Merge branch 'master' into staging-next 
Manually resolved a conflict in
pkgs/development/libraries/libbladeRF/default.nix.
 2021-01-09 12:16:11 +01:00
Cyril Cohen
9ffd16b385 coqPackages: refactor 2021-01-09 11:56:17 +01:00
github-actions[bot]
ecebf82121
Merge master into staging-next 2021-01-08 12:29:36 +00:00
Gabriel Ebner
5000e5707b
Merge pull request #108717 from Dyazz/libqalculate 
libqalculate: 3.14.0 -> 3.16.0
 2021-01-08 11:23:31 +01:00
Dyazz
8cdefb6995 qalculate-gtk: 3.15.0 -> 3.16.0 2021-01-08 08:43:39 +01:00
Jan Tojnar
e6c0c98940
Merge branch 'master' into staging-next 
zynaddsubfx conflict has been updated to 3.0.1, which conflicted with rewrite after 3.0.5 update on a different branch.
 2021-01-08 02:07:34 +01:00
Evils
0448f1c082 kicad-unstable: 2020-12-01 -> 2020-12-23 2021-01-07 16:17:41 -05:00
Evils
9be551c1d8 kicad: 5.1.8 -> 5.1.9 2021-01-07 16:17:41 -05:00
Evils
86e29a0b72 kicad: fix update.sh multiple tag reply handling 
and fix tabs in update.sh
 2021-01-07 16:17:41 -05:00
Sandro
7ae17783a7
Merge pull request #108432 from jbedo/fastp 
fastp: init 0.20.1
 2021-01-07 21:44:33 +01:00
github-actions[bot]
5c072a088d
Merge master into staging-next 2021-01-07 18:40:50 +00:00
Sandro
ec56bf6ede
Merge pull request #106456 from eduardosm/diylc 2021-01-07 17:24:42 +01:00
Jan Tojnar
f19eb635b4
Merge branch 'master' into staging-next 
b04fc593e7 seems to have accidentally changed mkDerivation function for dfilemanager and solarus-quest-editor so I have reverted that here.
 2021-01-07 13:04:31 +01:00
Eduardo Sánchez Muñoz
0d84b3f540 diylc: init at 4.15.1 2021-01-07 12:53:35 +01:00
Justin Bedo
bdf3d727ca
fastp: init 0.20.1 2021-01-07 18:24:19 +11:00
Devon Richards
7a16349789
lean: 3.23.0 -> 3.24.0 
We have to update to be able to use the current version of mathlib.
 2021-01-06 21:38:04 -06:00
Сухарик
4746e1717f
sympy: 1.6.2 -> 1.7.1 (#107663) 
* sympy: 1.6.2 -> 1.7.1

* sage: adapt tests to sympy 1.7

Co-authored-by: Mauricio Collares <mauricio@collares.org>
 2021-01-06 17:10:30 +00:00
Sandro
0af4d59732
Merge pull request #108437 from jbedo/varscan 
varscan: 2.4.2 -> 2.4.4
 2021-01-06 00:19:30 +01:00