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80295 Commits

Author SHA1 Message Date
Martin Weinelt
c0c8dcd828 pythonPackages.pulsectl: init at 20.4.3 2020-04-21 16:17:36 -07:00
Jan Tojnar
78a7c57367
Merge pull request #81731 from r-ryantm/auto-update/appstream-glib 2020-04-22 00:36:53 +02:00
Jonathan Ringer
5d4162e9f9 python3Packages.dotnetcore2: 2.1.11 -> 2.1.13 
instead of installing only what's needed, remove extraneous executable
 2020-04-21 14:40:26 -07:00
Michael Weiss
0d1194704b
python3Packages.google_api_python_client: 1.8.0 -> 1.8.1 
This contains a fix for the goobook build which would break due to this
update.
 2020-04-21 22:08:50 +02:00
Frederik Rietdijk
23be4a8b4d Merge master into staging-next 2020-04-21 19:59:56 +02:00
Frederik Rietdijk
ec21df329a
Merge pull request #85636 from matthewbauer/blas-lapack-fix-fallout-from-83888 
BLAS/LAPACK fix fallout from #83888
 2020-04-21 19:59:16 +02:00
Frederik Rietdijk
e7593313a6
Merge pull request #84354 from bandresen/clj-kondo_2020.03.20->2020.04.05 
clj-kondo: 2020.03.20 -> 2020.04.05
 2020-04-21 19:51:08 +02:00
Kevin Rauscher
080e82493b metals: 0.8.3 -> 0.8.4 2020-04-21 19:43:53 +02:00
Frederik Rietdijk
bae8756c1a libyaml: 0.2.3 -> 0.2.4 2020-04-21 18:43:47 +02:00
1000101
803ff6e851 shopify-themekit: init at 1.0.3 2020-04-21 18:33:16 +02:00
Mario Rodas
9d81c54b31 opam: add marsam to maintainers 2020-04-21 15:49:43 +02:00
Mario Rodas
05cfa5ff99 opam: 2.0.6 -> 2.0.7 2020-04-21 15:49:43 +02:00
Mario Rodas
6a03fa96ea
Merge pull request #85411 from anmonteiro/anmonteiro/bs-platform-7.3.1 
bs-platform: 7.2.0 -> 7.3.1
 2020-04-21 08:01:11 -05:00
Mario Rodas
357054b656
Merge pull request #85648 from xrelkd/update/cargo-expand 
cargo-expand: 0.4.19 -> 0.5.0
 2020-04-21 07:16:13 -05:00
Frederik Rietdijk
cf1a68360e python2: 2.7.17 -> 2.7.18 2020-04-21 11:21:39 +02:00
Vincent Laporte
22a3bf9fb9
Merge pull request #85142 from sternenseemann/mirage-crypto 
ocamlPackages: jackline: switch to mirage-crypto and update dependencies
 2020-04-21 08:56:52 +02:00
Mario Rodas
1a36927174 ocamlformat: 0.14.0 -> 0.14.1 
Changelog: https://github.com/ocaml-ppx/ocamlformat/releases/tag/0.14.1
 2020-04-21 08:56:19 +02:00
Vincent Laporte
974920ccd4 ocamlPackages.alcotest: 0.8.5 → 1.0.1 2020-04-21 08:47:40 +02:00
Vincent Laporte
fc317e100a ocamlPackages.digestif: fix tests for alcotest ≥ 1.0 2020-04-21 08:47:40 +02:00
Vincent Laporte
36632263e0 ocamlPackages.base64: fix tests for alcotest ≥ 1.0 2020-04-21 08:47:40 +02:00
Vincent Laporte
f2788cdf11 ocamlPackages.angstrom: disable tests for OCaml < 4.05 2020-04-21 08:47:40 +02:00
Vincent Laporte
1bdf4d121b ocamlPackages.bigstringaf: disable tests for OCaml < 4.05 2020-04-21 08:47:40 +02:00
R. RyanTM
aaddfc0c5b libunwind: 1.3.1 -> 1.4.0 2020-04-21 08:41:13 +02:00
R. RyanTM
6a64dbefd0 libnetfilter_conntrack: 1.0.7 -> 1.0.8 2020-04-21 08:40:58 +02:00
Lancelot SIX
6c162416ca bison: 3.5.2 -> 3.5.4 2020-04-21 08:40:37 +02:00
R. RyanTM
0293a4b37f waf: 2.0.19 -> 2.0.20 2020-04-21 08:40:14 +02:00
R. RyanTM
640186a866 libvdpau: 1.3 -> 1.4 2020-04-21 08:38:50 +02:00
R. RyanTM
4613022b5d libyaml: 0.2.2 -> 0.2.3 2020-04-21 08:37:46 +02:00
Jörg Thalheim
c88f04cb93 gpgme: convert macos sed patch scripts to patch files 
This is less brittle and breaks loud if the code changes.
Also remove the /usr/bin/file patch. It is not really required
for the build to work, the generated warning is harmless.
 2020-04-21 08:37:12 +02:00
Kirill Elagin
5470d96645 pgpgme: Fix build with python on macOS 
* Replace LD_LIBRARY_PATH with OS-specific name (e.g. DYLD_LIBRARY_PATH
  on macOS).
* Disable Python tests on macOS, because they use gpg, which fails due
  to a very long socket path (https://github.com/NixOS/nix/pull/1085).

The former should be fixed upstream. The latter is a Nix-specific issue,
but it can be worked-around upstream by making Python tests respect
--disable-gpg-test.
 2020-04-21 08:37:12 +02:00
R. RyanTM
c9576a4b74 doxygen: 1.8.17 -> 1.8.18 2020-04-21 08:33:04 +02:00
Jan Tojnar
9073a0cb8b meson: 0.53.2 → 0.54.0 
https://mesonbuild.com/Release-notes-for-0-54-0.html
 2020-04-21 08:32:39 +02:00
Pavol Rusnak
3c83abd60f libfido2: 1.3.1 -> 1.4.0 
- drop upstreamed patches
- use system hidapi
 2020-04-21 08:31:37 +02:00
Frederik Rietdijk
803b3d296c Merge staging-next into staging 2020-04-21 08:29:51 +02:00
Frederik Rietdijk
ef1679a038
Merge pull request #85171 from bcdarwin/python3-mayavi 
python3Packages.mayavi: update from Python 2 to Python 3 (and switch from wxPython to pyqt5)
 2020-04-21 08:01:57 +02:00
Dmitry Kalinkin
c7d4882ab1
python3Packages.matplotlib: 3.1.3 -> 3.2.1, and various cleanups (#84362) 
* pythonPackages.matplotlib: add veprbl to maintainers

* pythonPackages.matplotlib: remove an old darwin hack

* pythonPackages.matplotlib: remove python and stdenv from buildInputs

* python3Packages.matplotlib: remove a hack for python33

* pythonPackages.matplotlib: remove outdated checkPhase

Downloading the baseline_images is not a real issue, building against
older freetype (local_freetype = True) is, perhaps, not what we
want. The good news is that the tests would pass (tested on 3.2.1) if
we were to enable them:

========== 6684 passed, 1332 skipped, 10 xfailed in 228.64s (0:03:48) ==========

* pythonPackages.matplotlib: provide setup.cfg from a file instead of a patch

* python3Packages.matplotlib: 3.1.3 -> 3.2.1
 2020-04-21 07:56:13 +02:00
Ben Darwin
fe07e2b2ac elastix: enable tests 2020-04-21 07:54:59 +02:00
Ben Darwin
30cafee8b6 elastix: python -> python3 2020-04-21 07:54:59 +02:00
Raphael Borun Das Gupta
5dc6f02d77 lektor: fix "ImportError: No module named pkg_resources" 2020-04-21 07:42:35 +02:00
John Ericson
607522c78d numpy: Use blas and lapack dev outputs for include dirs 2020-04-20 21:40:48 -04:00
xrelkd
fd580728d9 cargo-expand: 0.4.19 -> 0.5.0 2020-04-21 09:23:53 +08:00
Matthew Bauer
a6a502fca0 magma: remove mklSupport flag 
This now relies on the "blas" and "lapack" packages.
 2020-04-20 16:02:57 -05:00
Matthew Bauer
ff2f2644f8 blas,lapack: use isILP64 instead of is64bit 
This is a better name since we have multiple 64-bit things that could
be referred to.

LP64  : integer=32, long=64, pointer=64
ILP64 : integer=64, long=64, pointer=64
 2020-04-20 16:02:43 -05:00
Matthew Bauer
015f46beba numpy: set lapack,blas library names correctly 2020-04-20 13:53:29 -05:00
markuskowa
3bbd074217
Merge pull request #79953 from r-ryantm/auto-update/mdds 
mdds: 1.5.0 -> 1.6.0
 2020-04-20 20:27:22 +02:00
markuskowa
e18bb6fa83
Merge pull request #84340 from r-ryantm/auto-update/byacc 
byacc: 20191125 -> 20200330
 2020-04-20 19:03:13 +02:00
markuskowa
52df4fa7d0
Merge pull request #83752 from r-ryantm/auto-update/netcdf 
netcdf: 4.7.3 -> 4.7.4
 2020-04-20 18:59:17 +02:00
Lars Jellema
b674acee6e ghdl: init at 0.37 2020-04-20 14:41:22 +02:00
Lars Jellema
8e79583510 gnat: init at 9.3.0 2020-04-20 14:41:22 +02:00
worldofpeace
63bb75a4d9
Merge pull request #85488 from lionello/ldc-bootstrap 
ldc: 1.17.0 -> 1.20.1
 2020-04-20 08:15:20 -04:00
Léo Gaspard
203955fa0c
Merge pull request #82714 from delroth/s3tc 
libtxc_dxtn{,_s2tc}: remove from nixpkgs + hardware.opengl options
 2020-04-20 13:41:47 +02:00
Jörg Thalheim
216237e349
Merge pull request #85579 from siriobalmelli-foss/fix/howdoi 2020-04-20 10:41:53 +01:00
Mario Rodas
172746d796
icu66: init at 66.1 2020-04-20 04:21:00 -05:00
Mario Rodas
c5bcdbf2c0
icu65: init at 65.1 2020-04-20 04:20:00 -05:00
Mario Rodas
b3c3a0bd18 dune_2: 2.5.0 -> 2.5.1 
Changelog: https://github.com/ocaml/dune/releases/tag/2.5.1
 2020-04-20 09:08:36 +02:00
Pierre Bourdon
f52443efae pythonPackages.pyopengl: avoid dragging in 500M of -dev packages 
Only the actual shared libraries are required to be installed, and they
are imported directly by path via ctypes. The package's patchPhase
already takes care of embedding the Nix store paths of the required
libraries into pyopengl.

This reduces the transitive closure size of PyOpenGL: 622M -> 136M.
 2020-04-20 08:54:36 +02:00
Vincent Laporte
3e7a2b9147 ocamlPackages.janeStreet: 0.12 → 0.13 
ocamlPackages.bistro: fix for core-0.13
ocamlPackages.phylogenetics: 2020-01-05 → 2020-01-25
 2020-04-20 08:38:31 +02:00
Vincent Laporte
75971d096a ocamlPackages.async_ssl: remove at 113.33.07 
This is the legacy version for OCaml ≤ 4.02
 2020-04-20 08:38:31 +02:00
Vincent Laporte
f39712960a ocamlPackages.rpclib: 6.0.0 → 7.0.0 2020-04-20 08:38:31 +02:00
Benjamin Hipple
e4db75f46d
Merge pull request #84535 from bcdarwin/update-beluga 
beluga: 20180403 -> unstable-2020-03-11
 2020-04-19 22:53:50 -04:00
Ben Darwin
c62428963a ocamlPackages.sedlex_2: fix dependencies (as per 77901a9) 2020-04-19 21:50:37 -04:00
Ben Darwin
3a9f743605 ocamlPackages.linenoise: 1.1.0 -> 1.3.0 2020-04-19 21:50:37 -04:00
Ben Darwin
261d7c2f66 ocamlPackages.dune-build-info: init at 2.4.0 2020-04-19 21:50:37 -04:00
Pierre Bourdon
1b89bffcf4
libtxc_dxtn{,_s2tc}: remove from nixpkgs + hardware.opengl options 
Context: discussion in https://github.com/NixOS/nixpkgs/pull/82630

Mesa has been supporting S3TC natively without requiring these libraries
since the S3TC patent expired in December 2017.
 2020-04-20 03:19:41 +02:00
Michael Raskin
916aa568a2
Merge pull request #85547 from AshyIsMe/j901 
j: 807 -> 901
 2020-04-20 00:57:34 +00:00
Mario Rodas
c3945dc31c
Merge pull request #85526 from zowoq/misc 
buildah, conmon: misc fixes
 2020-04-19 19:26:41 -05:00
Alyssa Ross
ec2710b0d7 libqmi: enableParallelBuilding 
Works fine for me with -j48.
 2020-04-19 22:37:11 +00:00
Maximilian Bosch
45948bd56b
python3Packages.pytesseract: 0.3.3 -> 0.3.4 
https://pypi.org/project/pytesseract/0.3.4/
 2020-04-19 22:43:03 +02:00
Aaron Ash
0c454c46f4 j: 807 -> 901 
Upgrade j to 901.
Uses the newer build scripts in the make2 directory in the jsource repo.
 2020-04-20 06:27:20 +10:00
Sirio Balmelli
85501cae5e
howdoi: cachelib and appdirs dependencies _also_ needed for Linux. 
Signed-off-by: Sirio Balmelli <sirio@b-ad.ch>
 2020-04-19 19:43:08 +00:00
Sirio Balmelli
0e48a68559
howdoi: fix Darwin build dependencies 
Signed-off-by: Sirio Balmelli <sirio@b-ad.ch>
 2020-04-19 21:39:37 +02:00
worldofpeace
2a8f5b02b7
Merge pull request #85571 from rnhmjoj/secretstorage 
pythonPackages.secretstorage: drop old dependency
 2020-04-19 13:19:56 -04:00
rnhmjoj
c9a77e4d6d
pythonPackages.secretstorage: drop old dependency 
pygobject was an optional dependency at some point but it has been
removed and is no longer needed.
 2020-04-19 19:18:18 +02:00
Jörg Thalheim
d96959a629
Merge pull request #85414 from zowoq/skopeo 2020-04-19 18:12:50 +01:00
Yegor Timoshenko
6f1165a0cb
Merge pull request #84522 from emilazy/add-linux-hardened-patches 
linux_*_hardened: use linux-hardened patch set
 2020-04-19 20:01:35 +03:00
Jörg Thalheim
6cfb2c8ebc
Merge pull request #85499 from bhipple/u/dnnl 2020-04-19 16:39:35 +01:00
Jan Tojnar
6cbf2e186c
webkitgtk: 2.28.0 → 2.28.1 (#85378) 
Fixes a CVE https://webkitgtk.org/security/WSA-2020-0004.html
https://webkitgtk.org/2020/04/13/webkitgtk2.28.1-released.html
 2020-04-19 16:54:16 +02:00
Lionello Lunesu
e727346ccc Add missing deps for linux 2020-04-19 21:44:06 +08:00
Lionello Lunesu
0b23e4e5b7 Remove top-level ldcBootstrap 2020-04-19 20:52:41 +08:00
zowoq
c34bc1d824 skopeo: install completion 2020-04-19 21:24:04 +10:00
rnhmjoj
a3e64e81fc
pythonPackages.publicsuffix2: init at 2.2019-12-21 2020-04-19 11:19:27 +02:00
Mario Rodas
b2d8cf9def
Merge pull request #85473 from marsam/update-bazelisk 
bazelisk: 1.3.0 -> 1.4.0
 2020-04-19 02:38:52 -05:00
Matthew Bauer
a2d9f58433
Merge pull request #85512 from ggreif/wasmtime 
wasmtime-0.12.0: fix cargoSha256
 2020-04-18 22:03:24 -05:00
worldofpeace
0bab5253b1
Revert "[WIP] {help wanted} twolame: 2017-09-27 -> 0.4.0" 2020-04-18 20:43:37 -04:00
zowoq
7adb98309a buildah: installShellCompletion 2020-04-19 10:27:40 +10:00
Vladimír Čunát
e233a9d4dd
Merge #84442: staging-next branch 2020-04-18 23:11:00 +02:00
Anderson Torres
8bafac89cd
Merge pull request #84363 from AndersonTorres/update-twolame 
twolame : 2017-09-27 -> 0.4.0
 2020-04-18 16:54:43 -03:00
John Ericson
1ea80c2cc3 Merge remote-tracking branch 'upstream/master' into staging 2020-04-18 15:40:49 -04:00
Gabor Greif
94d88d3b70 wasmtime-0.12.0: fix cargoSha256 2020-04-18 21:30:29 +02:00
Mario Rodas
45b21b38a8
Merge pull request #85346 from xrelkd/update/tinygo 
tinygo: 0.12.0 -> 0.13.0
 2020-04-18 14:08:59 -05:00
Jan Tojnar
09c4736405
Merge pull request #83755 from jtojnar/jcat-0.1 2020-04-18 20:38:24 +02:00
Markus Wamser
5fbab6dabb
pythonPackages.pdfposter init at 0.7.post1 (#82926) 
Signed-off-by: Markus S. Wamser <github-dev@mail2013.wamser.eu>
 2020-04-18 13:15:29 -04:00
Benjamin Hipple
dfe70a2d63 dnnl: 1.2.2 -> 1.4 
The upstream readme has a note about renaming the git repo and libname:
https://github.com/oneapi-src/oneDNN#oneapi-deep-neural-network-library-onednn

Changelog: https://github.com/oneapi-src/oneDNN/releases/tag/v1.4
 2020-04-18 11:40:47 -04:00
Lionello Lunesu
4c538d022d ldc: 1.17.0 -> 1.20.1 2020-04-18 20:48:57 +08:00
Pavol Rusnak
fadcfc3ea4
treewide: per RFC45, remove more unquoted URLs 2020-04-18 14:04:37 +02:00
Vladimír Čunát
d96487b9ca
Merge branch 'master' into staging-next 
Hydra nixpkgs: ?compare=1582510
 2020-04-18 07:42:26 +02:00
Vladimír Čunát
312e9037f4
python2.pkgs.cryptography: fixup build of dependants 
... most notably fix pyopenssl.  I can't say I really understand this,
but the commit seems safe enough.
 2020-04-18 07:39:10 +02:00
John Ericson
e3d50e5cb0 Merge branch 'master' of github.com:NixOS/nixpkgs into staging 2020-04-18 00:10:08 -04:00
Mario Rodas
1d3de252ff
Merge pull request #85380 from filalex77/packet-cli-0.0.6 
packet-cli: init at 0.0.6
 2020-04-17 20:24:13 -05:00
lewo
b8cd08a927
Merge pull request #85467 from zowoq/yq 
yq-go: 3.2.1 -> 3.3.0
 2020-04-18 02:42:18 +02:00
Will Dietz
ca722c5e2b libtorrent-rasterbar: 1.1.11 -> 1.2.5 
https://raw.githubusercontent.com/arvidn/libtorrent/libtorrent-1_2_5/ChangeLog

The old release is kept available as libtorrentRasterbar-1_1_x for deluge 1.x.
 2020-04-18 02:00:04 +02:00
Milan Pässler
69e73264a9 Partially revert "libtorrent-raster: 1.1.11 -> 1.2.5; qbittorrent: 4.2.1 -> 4.2.2" 
This partially reverts commit cc03fb4210.
The libtorrentRasterbar update broke deluge 1.x, the hash was not
updated and obsolete dependencies and flags were not removed.
 2020-04-18 02:00:04 +02:00
John Ericson
cc880cd91f Merge remote-tracking branch 'upstream/master' into staging 2020-04-17 18:50:55 -04:00
zowoq
95847e6405 yq-go: 3.2.1 -> 3.3.0 
https://github.com/mikefarah/yq/releases/tag/3.3.0
 2020-04-18 08:49:49 +10:00
adisbladis
ce283f055b
Merge pull request #85448 from bhipple/fix/mesa-glu 
mesa-glu: use HTTPS instead of FTP
 2020-04-18 00:46:20 +02:00
John Ericson
33c2a76c5e Merge remote-tracking branch 'upstream/master' into staging 2020-04-17 18:40:51 -04:00
John Ericson
cdfda4b455
Merge pull request #83888 from matthewbauer/blas-alternatives 
Add BLAS/LAPACK switching mechanism
 2020-04-17 18:38:41 -04:00
Matthew Bauer
fcf33e2499 scs: breaks on 64bit blas 2020-04-17 16:24:31 -05:00
Matthew Bauer
98fb0ede70 arrayfire: remove mkl 
This is unfree.
 2020-04-17 16:24:30 -05:00
Matthew Bauer
1c8aba8334 treewide: use blas and lapack 
This makes packages use lapack and blas, which can wrap different
BLAS/LAPACK implementations.

treewide: cleanup from blas/lapack changes

A few issues in the original treewide:

- can’t assume blas64 is a bool
- unused commented code
 2020-04-17 16:24:09 -05:00
Matthew Bauer
43873351ff blas/lapack: add wrapper for “alternative”s of BLAS/LAPACK provider 
This is based on previous work for switching between BLAS and LAPACK
implementation in Debian[1] and Gentoo[2]. The goal is to have one way
to depend on the BLAS/LAPACK libraries that all packages must use. The
attrs “blas” and “lapack” are used to represent a wrapped BLAS/LAPACK
provider. Derivations that don’t care how BLAS and LAPACK are
implemented can just use blas and lapack directly. If you do care what
you get (perhaps for some CPP), you should verify that blas and lapack
match what you expect with an assertion.

The “blas” package collides with the old “blas” reference
implementation. This has been renamed to “blas-reference”. In
addition, “lapack-reference” is also included, corresponding to
“liblapack” from Netlib.org.

Currently, there are 3 providers of the BLAS and LAPACK interfaces:

- lapack-reference: the BLAS/LAPACK implementation maintained by netlib.org
- OpenBLAS: an optimized version of BLAS and LAPACK
- MKL: Intel’s unfree but highly optimized BLAS/LAPACK implementation

By default, the above implementations all use the “LP64” BLAS and
LAPACK ABI. This corresponds to “openblasCompat” and is the safest way
to use BLAS/LAPACK. You may received some benefits from “ILP64” or
8-byte integer BLAS at the expense of breaking compatibility with some
packages.

This can be switched at build time with an override like:

    import <nixpkgs> {
        config.allowUnfree = true;
        overlays = [(self: super: {
          lapack = super.lapack.override {
            lapackProvider = super.lapack-reference;
          };
          blas = super.blas.override {
            blasProvider = super.lapack-reference;
          };
        })];
      }

or, switched at runtime via LD_LIBRARY_PATH like:

    $ LD_LIBRARY_PATH=$(nix-build -E '(with import <nixpkgs> {}).lapack.override { lapackProvider = pkgs.mkl; is64bit = true; })')/lib:$(nix-build -E '(with import <nixpkgs> {}).blas.override { blasProvider = pkgs.mkl; is64bit = true; })')/lib ./your-blas-linked-binary

By default, we use OpenBLAS LP64 also known in Nixpkgs as
openblasCompat.

[1]: https://wiki.debian.org/DebianScience/LinearAlgebraLibraries
[2]: https://wiki.gentoo.org/wiki/Blas-lapack-switch
 2020-04-17 16:23:55 -05:00
Matthew Bauer
90326ba624 lapack: enable shared libraries, cblas, and tests 2020-04-17 16:17:12 -05:00
adisbladis
04afb68ad7
systemfd: init at 0.3.0 2020-04-17 22:10:18 +01:00
Peter Simons
10100a97c8 ghc-8.10.x: add plenty of overrides to fix builds 2020-04-17 22:50:43 +02:00
Mario Rodas
2f33062f53 flow: 0.122.0 -> 0.123.0 
Changelog: https://github.com/facebook/flow/releases/tag/v0.123.0
 2020-04-17 22:00:54 +02:00
Graham Christensen
e42312e354
Merge pull request #85183 from Xe/zig-0.6.0 
zig: upgrade to 0.6.0
 2020-04-17 15:17:45 -04:00
Peter Simons
e9687df24a
Merge pull request #85178 from NixOS/haskell-updates 
Update Haskell package set to LTS 15.8 (plus other fixes)
 2020-04-17 21:02:58 +02:00
Matthieu Coudron
c881dd5e68 pythonPackages.pagelabels: init at 1.2.0 
Used in termpdf I want to package.
 2020-04-17 21:01:17 +02:00
Matthieu Coudron
c0a498b5d5 pythonPackages.pdfrw: init at 0.4.0 2020-04-17 21:01:17 +02:00
Peter Simons
d6aedf7bcd haskell-ghc-lib-parser-ex: fix build with GHC versions prior to 8.8.x 2020-04-17 20:50:48 +02:00
Guillaume Bouchard
abc4f961b4 haskellPackages.ghcWithPackages: fix for GHC 8.10 
This closes #79441.

ghcWithPackages is using `ghc-pkg recache` to build its package
database. By doing so, it overrides the `package.cache[.lock]` files.

Details are unclear, but GHC 8.10 changed a bit the behavior.
Previously, it was unconditionally replacing the files by new ones. Now
it tries to open (for modification) the files. These files are symlinks
to another nix derivation, which is hence read-only.

This commit removes the files before running `ghc-pkg recache`, hence it
will just write the new files.

Tested with `haskellPackages.ghcWithPackages` (i.e. GHC 8.8) and
`haskell.packages.ghc8101.ghcWithPackages` (i.e GHC 8.10) with the
following nix file, at the root of the nixpkgs repository:

```
with import ./. {
  overlays = [
    (
      self: super: {
        haskellPackages = super.haskell.packages.ghc8101.override {
          overrides = selfh: superh: {
             th-lift-instances = super.haskell.lib.doJailbreak superh.th-lift-instances;
             th-expand-syns    = super.haskell.lib.doJailbreak superh.th-expand-syns;
             th-reify-many     = super.haskell.lib.doJailbreak superh.th-reify-many;
             th-orphans        = super.haskell.lib.doJailbreak superh.th-orphans;
             haskell-src-meta  = super.haskell.lib.doJailbreak superh.haskell-src-meta;
          };
        };
      }
  )
  ];
};
haskellPackages.ghcWithPackages(p:[p.PyF])
```

This will test with GHC 8.10. Comment out the `overlays` to test with
GHC 8.8.
 2020-04-17 20:50:48 +02:00
Mike Sperber
53cfd1d132 haskell-tensorflow: unbreak 
- get the current Git head of haskell-tensorflow
- adjust dependencies
 2020-04-17 20:50:48 +02:00
Michael Alan Dorman
d59d157ad9 cabal-install-parsers: update Cabal dependency 
This also unbreaks `haskell-ci`.
 2020-04-17 20:50:48 +02:00
Jappie Klooster
b95534aaea cut-the-crap: init at 1.0.0 2020-04-17 20:50:48 +02:00
Manuel Bärenz
a762316e72 haskell simple-affine-space: Disable test suite 2020-04-17 20:50:48 +02:00
Troels Henriksen
802dfc8bd7 futhark: stop wrapping the executable 2020-04-17 20:50:48 +02:00
(cdep)illabout
a0612c2a06 spago: 0.14.0 -> 0.15.1 2020-04-17 20:50:48 +02:00
Gabor Greif
7932fb22cb ghcHEAD: bump to 8.11.20200403 (#84217) 
* ghcHEAD: bump to 8.11.20200403

* ghcHead: reduce diff vs. 8.10.1

dontAddExtraLibs was removed by accident (IMO) in ea19a8ed1e

* ghcHEAD: add ability to use system libffi

- enable nixpkgs' libffi
- minimise diffs against 8.10.1
- remove patching

* remove configure warning about --with-curses-includes

configure: WARNING: unrecognized options: --with-curses-includes
 2020-04-17 20:50:48 +02:00
Peter Simons
fd1103227d hackage-packages.nix: automatic Haskell package set update 
This update was generated by hackage2nix v2.15.1 from Hackage revision
fcda2563cd.
 2020-04-17 20:50:40 +02:00
Peter Simons
fd63776ff4 hackage2nix: update list of broken builds to fix evaluation errors 2020-04-17 20:50:26 +02:00
Remo
83d84e6233 hackage2nix: unbreak postgrest 2020-04-17 20:50:07 +02:00
Remo
629af9f518 hackage2nix: unbreak hasql-pool 2020-04-17 20:49:49 +02:00
Peter Simons
572e8f6008 LTS Haskell 15.8 2020-04-17 20:49:10 +02:00
Jan Tojnar
42f2d370a5
Merge pull request #81955 from r-ryantm/auto-update/poppler-glib 2020-04-17 18:38:20 +02:00
Michele Guerini Rocco
8afc0daa29
Merge pull request #85431 from rnhmjoj/vapoursynth 
vapoursynth: R48 -> R49
 2020-04-17 18:20:46 +02:00
Peter Simons
464d1861ee
Merge pull request #81307 from jabranham/r-pkgs 
R: Update R, CRAN, & Bioconductor
 2020-04-17 17:43:38 +02:00
Benjamin Hipple
ba8c116519 mesa-glu: use HTTPS instead of FTP 
FTP is often blocked by firewalls and is generally slower and less secure than HTTPS.

No change to `src` hash.
 2020-04-17 11:35:16 -04:00
Emily
10dd3f3de0 graphene-hardened-malloc: enable on aarch64-linux 2020-04-17 16:12:29 +01:00
Jörg Thalheim
a7b3a6982a
Merge pull request #68171 from rileyinman/postcss-cli 2020-04-17 15:24:37 +01:00
Michael Fellinger
056778b315
crystal: 0.31 -> 0.34 (#85432) 
* crystal: 0.31 -> 0.34

* crystal: use latest llvm

* crystal: skip tests for 0.33
 2020-04-17 21:04:33 +08:00
Florian Klink
357be5c66c
Merge pull request #85385 from takikawa/racket-enable-useprefix 
racket: use --enable-useprefix configure flag.
 2020-04-17 13:17:00 +02:00
Jörg Thalheim
61a03065fd
Merge pull request #84190 from geistesk/platformio-4.3.1 2020-04-17 11:37:07 +01:00
Jörg Thalheim
ee6f5a32bb
python38.pkgs.python-jsonrpc-server: disable for python38 2020-04-17 11:22:35 +01:00
Timo Kaufmann
42ca7c114e
Merge pull request #85176 from timokau/zimports-init 
python.pkgs.zimports: init at 0.2.0
 2020-04-17 09:43:12 +00:00
Mario Rodas
fa4907859a
bazelisk: 1.3.0 -> 1.4.0 
Changelog; https://github.com/bazelbuild/bazelisk/releases/tag/v1.4.0
 2020-04-17 04:20:00 -05:00
zowoq
6dc7443d1b skopeo: cleanup 2020-04-17 17:34:34 +10:00
rnhmjoj
c339130b80
vapoursynth: R48 -> R49 2020-04-17 08:51:55 +02:00
Riley Inman
523152f8c7 postcss-cli: init at 7.1.0 2020-04-17 01:17:07 -04:00
Drew Risinger
0b6602c9a2 python3Packages.cirq: fix test failures (ZHF) 
Also build on aarch64 by disabling a few failing tests.
 2020-04-16 18:44:02 -07:00
Antonio Nuno Monteiro
a6f776bba5
bs-platform: 7.2.0 -> 7.3.1 2020-04-16 15:44:39 -07:00
Maximilian Bosch
cd5bc89cca
evcxr: 0.5.0 -> 0.5.1 
582ce09f21/RELEASE_NOTES.md (version-051)
 2020-04-17 00:28:12 +02:00
ajs124
9e34eccb0f pythonPackages.rtslib: 2.1.71 -> 2.1.72 2020-04-16 12:56:28 -07:00
ajs124
15e790cec8 pythonPackages.configshell: 1.1.27 -> 1.1.28 2020-04-16 12:54:21 -07:00
R. RyanTM
88be9a1b2f python27Packages.foxdot: 0.8.5 -> 0.8.7 2020-04-16 12:51:21 -07:00
Maximilian Bosch
ab0a10b39b
Merge pull request #85341 from Ma27/bump-hydra 
hydra: 2020-04-07 -> 2020-04-16
 2020-04-16 21:48:45 +02:00
sternenseemann
b5770e34ff ocamlPackages.otr: 0.3.6 -> 0.3.8 
Contains switch from nocrypto to mirage-crypto
 2020-04-16 19:57:35 +02:00
sternenseemann
99ac3ce2bf ocamlPackages.tls: 0.10.4 -> 0.11.1 
This update contains a switch to the dune build system as well as a
switch from nocrypto to mirage-crypto.
 2020-04-16 19:57:35 +02:00
sternenseemann
4bf689b3e0 ocamlPackages.x509: 0.7.1 -> 0.11.0 
This update contains the switch from nocrypto to mirage-crypto
 2020-04-16 19:57:35 +02:00
sternenseemann
824d041cf5 ocamlPackages.ppx_cstruct: propagate dependencies 
Without propagation some builds of packages requiring ppx_cstruct would
fail.
 2020-04-16 19:57:35 +02:00
R. RyanTM
f7500ace8d dkimpy: 1.0.2 -> 1.0.4 2020-04-16 10:31:36 -07:00
Asumu Takikawa
b271255ede racket: use --enable-useprefix configure flag. 
This is to fix a regression in upstream Racket packaging, the upstream
bug tracking this is here:

  https://github.com/racket/racket/issues/3046

When the bug is fixed this workaround will be unnecessary.
 2020-04-16 09:49:21 -07:00
R. RyanTM
a084a2c868 ephemeralpg: 2.9 -> 3.0 2020-04-16 16:18:51 +00:00
Oleksii Filonenko
90cd0a6334
packet-cli: init at 0.0.6 2020-04-16 18:21:21 +03:00
Jan Tojnar
d1009f4d99
gst_all_1.gstreamer: fix build 2020-04-16 16:46:13 +02:00
sternenseemann
4e0a6294a3
ocamlPackages.erm_xmpp: 0.3+20180112 -> 0.3+20200317 2020-04-16 15:32:44 +02:00
Profpatsch
bcfca556f4 skalibs: 2.9.2.0 -> 2.9.2.1 2020-04-16 11:54:11 +02:00
Jan Tojnar
cae8d97c23
dconf: fix build 2020-04-16 11:29:27 +02:00
Jan Tojnar
a3b69ac641
dconf: format with nixpkgs-fmt 
Also:

* use pname + version instead of name
* reorder attributes
* change platforms linux + darwin → unix
 2020-04-16 11:27:50 +02:00
Jan Tojnar
4b706490da
Merge branch 'staging-next' into staging 2020-04-16 10:10:38 +02:00
Jan Tojnar
3d8e436917
Merge branch 'master' into staging-next 2020-04-16 10:09:43 +02:00
R. RyanTM
896680cd15 chromaprint: 1.4.3 -> 1.5.0 2020-04-16 13:18:50 +05:30
worldofpeace
10d1088f7f
Merge pull request #85338 from lopsided98/g2o-update 
g2o: unstable-2019-04-07 -> 20200410
 2020-04-16 02:33:43 -04:00
Jonathan Ringer
0eec28560f python3Packages.ibis: 1.2.0 -> 1.3.0, fix tests 2020-04-15 21:19:26 -07:00
Jan Tojnar
03bfda0196
poppler: add freedesktop team to maintainers 2020-04-16 04:54:58 +02:00
Mario Rodas
50db521dff
Merge pull request #85302 from das-g/chromedriver-81.0.4044 
chromedriver: 80.0.3987.16 -> 81.0.4044.69
 2020-04-15 21:38:34 -05:00
xrelkd
9ce430fc38 tinygo: 0.12.0 -> 0.13.0 2020-04-16 10:20:02 +08:00
Jan Tojnar
796f9696f1
poppler: 0.86.1 → 0.87.0 2020-04-16 04:18:09 +02:00
R. RyanTM
6187d5babc
poppler: 0.85.0 -> 0.86.1 2020-04-16 04:17:21 +02:00
Niklas Hambüchen
7d39eea965
Merge pull request #85283 from r-ryantm/auto-update/smarty3 
smarty3: 3.1.34 -> 3.1.35
 2020-04-16 04:16:30 +02:00
Ben Wolsieffer
9693911c5a g2o: unstable-2019-04-07 -> 20200410 2020-04-15 19:57:13 -04:00
Ben Wolsieffer
dd14ee840c g2o: fix log limit exceeded error in Hydra 2020-04-15 19:56:43 -04:00
Maximilian Bosch
ef80b6324b
hydra*: add passthru.tests to reference VM-tests 2020-04-16 01:01:31 +02:00
Maximilian Bosch
6f6c08af30
hydra-unstable: 2020-04-07 -> 2020-04-16 2020-04-16 01:01:08 +02:00
Maximilian Bosch
b7c3c3f5cc
cargo-make: 0.30.4 -> 0.30.5 
https://github.com/sagiegurari/cargo-make/releases/tag/0.30.5
 2020-04-15 22:35:46 +02:00
Jan Tojnar
2a19a03431
Merge pull request #85210 from prusnak/gtk-mac-integration 2020-04-15 21:15:07 +02:00
Jan Tojnar
1fade973fc
libjcat: init at 0.1.1 2020-04-15 20:30:06 +02:00
sternenseemann
759cac4288
ocamlPackages.notty: 0.2.1 → 0.2.2 2020-04-15 19:03:46 +02:00
sternenseemann
a3cd9c9767
ocamlPackages.fmt: 0.8.6 -> 0.8.8 2020-04-15 18:30:09 +02:00
R. RyanTM
7cfd7367c1 python27Packages.autopep8: 1.5 -> 1.5.1 2020-04-15 17:22:02 +02:00
Raphael Das Gupta
dd3cc04adf chromedriver: 80.0.3987.16 -> 81.0.4044.69 2020-04-15 16:03:03 +02:00
sternenseemann
29a98f2be1
ocamlPackages.ounit2: init at 2.2.2 2020-04-15 15:01:36 +02:00
sternenseemann
90bc1492ca ocamlPackages.asn1-combinators: 0.2.0 -> 0.2.2 2020-04-15 14:33:57 +02:00
R. RyanTM
33da4f7174 smarty3: 3.1.34 -> 3.1.35 2020-04-15 08:56:51 +00:00
Anderson Torres
36b48140d6
Merge pull request #84631 from AndersonTorres/update-biblesync+sword 
Update biblesync+sword
 2020-04-15 01:13:49 -03:00
Anderson Torres
0ee3bf460e
Merge pull request #84607 from AndersonTorres/update-libtap 
libtap: 1.12.0 -> 1.14.0
 2020-04-15 00:42:37 -03:00
Anderson Torres
ee0929b0ba
Merge pull request #84275 from AndersonTorres/update-cimg 
cimg: 2.8.4 -> 2.9.0
 2020-04-15 00:38:56 -03:00
AndersonTorres
b818fb185a cimg: 2.8.4 -> 2.9.0 2020-04-14 21:39:39 -03:00
AndersonTorres
968ccdbc39 sword: 1.7.4 -> 1.8.1 2020-04-14 20:39:13 -03:00
AndersonTorres
88978483b1 biblesync: 1.1.2 -> 2.0.1 2020-04-14 20:39:13 -03:00
Mario Rodas
a9dd29a078
nodejs-13_x: 13.12.0 -> 13.13.0 
Changelog: https://github.com/nodejs/node/releases/tag/v13.13.0
 2020-04-14 18:00:00 -05:00
Matthew Bauer
849f26d61c python.pkgs.grpcio: use system openssl, zlib, and c-ares 2020-04-14 15:13:37 -04:00
Joachim Breitner
acc5a9c55f wasmtime: Do not prefix version with v 
it seems that this breaks the use of `nix-env -i wasmtime`
 2020-04-14 20:23:48 +02:00
Ben Darwin
9b83c440f6 python3Packages.mayavi: build for Python 3 instead of Python 2 
- switch from wxPython to Qt5
 2020-04-14 12:43:56 -04:00
sternenseemann
f234b2bce7
ocamlPackages.mirage-flow-unix/-combinators: init at 2.0.1 2020-04-14 18:15:10 +02:00
sternenseemann
7538b79607
ocamlPackages.mirage-clock-unix: init at 3.0.1 2020-04-14 18:09:02 +02:00
sternenseemann
c2db123b21
mirage-crypto{,-rng,-pk}: init at 0.6.2 2020-04-14 18:06:16 +02:00
Maximilian Bosch
85e15b545a
Merge pull request #85177 from mayflower/sslscan-openssl-ssl3 
sslscan: enabling scanning for sslv3
 2020-04-14 15:59:37 +02:00
Maximilian Bosch
401e07d419
Merge pull request #84551 from gnprice/pr-stripDebugList 
treewide: Fix types of stripDebugList attrs (and fix doc)
 2020-04-14 15:54:52 +02:00
worldofpeace
df012cc3c4
Merge pull request #85051 from cgevans/libwacom-1.3 
libwacom: 1.1 -> 1.3
 2020-04-14 09:20:28 -04:00
worldofpeace
46bf4cb283
Merge pull request #83808 from glittershark/fix-cairo-no-xlib 
cairo: pass --disable-xlib to config if no x11
 2020-04-14 09:13:36 -04:00
worldofpeace
4dc2c5b1d2 libwacom: add maintainers 2020-04-14 09:07:00 -04:00
Constantine Glen Evans
3b3e5bc7ea libwacom: 1.1 -> 1.3 2020-04-14 09:06:19 -04:00
Markus Kowalewski
11a99fb68f
globalarrays: 5.7 -> 5.7.1 2020-04-14 12:29:36 +02:00
Pavol Rusnak
da9feeb40b
gtk-mac-integration: 2.0.8 -> 2.1.3 2020-04-14 12:01:35 +02:00
sternenseemann
9dcaaeafff
ocamlPackages.eqaf: enable cstruct and bigarray modules 2020-04-14 11:57:24 +02:00
sternenseemann
96bf541725
ocamlPackages.eqaf: 0.5 -> 0.6 2020-04-14 11:56:10 +02:00
Vladyslav M
23584117d4
Merge pull request #85191 from xrelkd/update/tokei 
tokei: 11.0.0 -> 11.1.0
 2020-04-14 12:41:30 +03:00
Jörg Thalheim
418b24b133
Merge pull request #77752 from oxalica/rust-analyzer 
rust-analyzer: init at unstable-2020-03-09
 2020-04-14 10:19:59 +01:00
R. RyanTM
dee5dcbfb5 python37Packages.sphinxcontrib-katex: 0.5.1 -> 0.6.0 2020-04-14 00:13:14 -07:00
Rakesh Gupta
90c1406964 pythonPackages.py-multibase: init at 1.0.1 2020-04-14 00:12:52 -07:00
Vincent Laporte
ef8ea1e556
Merge pull request #85161 from sternenseemann/irmin 
ocamlPackages.irmin*: 2.0.0 -> 2.1.0, add ppx_irmin, ocaml-syntax-shims, index: 1.0.1 -> 1.2.0
 2020-04-14 06:43:57 +02:00
R. RyanTM
7c309eceeb python27Packages.swagger-ui-bundle: 0.0.5 -> 0.0.6 2020-04-13 21:33:32 -07:00
Vincent Laporte
f9c31303b2 ocamlPackages.dns-client: init at 4.4.1 2020-04-14 06:25:03 +02:00
Vincent Laporte
6edabf41b3 ocamlPackages.mirage-stack: init at 2.0.1 2020-04-14 06:25:03 +02:00
Vincent Laporte
32feaeab83 ocamlPackages.mirage-random: init at 2.0.0 2020-04-14 06:25:03 +02:00
Vincent Laporte
66ffbf57c3 ocamlPackages.mirage-protocols: init at 4.0.1 2020-04-14 06:25:03 +02:00
Vincent Laporte
81fa88504b ocamlPackages.mirage-flow: init at 2.0.1 2020-04-14 06:25:03 +02:00
Vincent Laporte
10a73b84d3 ocamlPackages.mirage-device: init at 2.0.0 2020-04-14 06:25:03 +02:00
Vincent Laporte
d7ee3bc968 ocamlPackages.mirage-clock: init at 3.0.1 2020-04-14 06:25:03 +02:00
Vincent Laporte
ad098ac026 ocamlPackages.randomconv: init at 0.1.3 2020-04-14 06:25:03 +02:00
Vincent Laporte
e021f27d75 ocamlPackages.dns: init at 4.4.1 2020-04-14 06:25:03 +02:00
Vincent Laporte
b70b03272a ocamlPackages.duration: init at 0.1.3 2020-04-14 06:25:03 +02:00
xrelkd
806a0596ea tokei: 11.0.0 -> 11.1.0 2020-04-14 11:24:55 +08:00
John Ericson
c8a6ea5161 Merge remote-tracking branch 'upstream/master' into staging 2020-04-13 22:17:15 -04:00
John Ericson
40000ebb4b
Merge pull request #84531 from TravisWhitaker/cross-clang 
LLVM: Always pass host/target info to compiler-rt/libstdcxxClang
 2020-04-13 22:13:55 -04:00
Austin Seipp
7b235b02e4
liburing: 0.4pre514_2454d630 -> 0.6pre600 
Signed-off-by: Austin Seipp <aseipp@pobox.com>
 2020-04-13 20:36:11 -05:00
Christine Dodrill
24b3158efc zig: apply suggestion from @cole-h 2020-04-13 18:56:41 -04:00
Travis Whitaker
74f3b25896 LLVM: Always pass host/target info to compiler-rt/libstdcxxClang 2020-04-13 18:49:27 -04:00
Christine Dodrill
f94bd95368
Update pkgs/development/compilers/zig/default.nix 
Co-Authored-By: Andrew Kelley <andrew@ziglang.org>
 2020-04-13 18:44:34 -04:00
Christine Dodrill
841089817d development/compilers/zig: upgrade to 0.6.0 2020-04-13 18:37:09 -04:00
worldofpeace
d49d8401ff
Merge pull request #84981 from prusnak/electron-wrapGAppsHook 
electron: fix wrapGAppsHook usage
 2020-04-13 17:43:17 -04:00
Matthew Bauer
e520d6af29
Merge pull request #84415 from matthewbauer/mb-cross-fixes-april2020 
Cross compilation fixes [april 2020]
 2020-04-13 16:48:38 -04:00
Timo Kaufmann
c26ee28613 python.pkgs.zimports: init at 0.2.0 
The author gives a pretty good overview of why one would want to use
zimports over other import organizers:

https://github.com/sqlalchemyorg/zimports/tree/0.2.0#zzzeek-why-are-you-writing-one-of-these-there-are-a-dozen-pep8-import-fixers
 2020-04-13 21:27:03 +02:00
Robin Gloster
f6be629595
sslscan: enabling scanning for sslv3 2020-04-13 21:23:22 +02:00
Jörg Thalheim
2d9888f61c
Merge pull request #85156 from DieGoldeneEnte/boost-check 
boost: check clang version
 2020-04-13 19:56:38 +01:00
Jörg Thalheim
8696dc32f9
Merge pull request #85155 from DieGoldeneEnte/coreclr-llvm 
coreclr: get clang from llvmPackages
 2020-04-13 19:56:02 +01:00
Roberto Di Remigio
fcf009bbb2 highfive: init at 2.2 
Co-Authored-By: Jon <jonringer@users.noreply.github.com>
 2020-04-13 11:22:02 -07:00
Alexey Shmalko
916c1e06ce cypress: 4.2.0 -> 4.3.0 2020-04-13 11:11:42 -07:00
Jan Tojnar
cc57640aeb
Merge pull request #84470 from jtojnar/ardour-cleanup 
ardour: clean up the expression
 2020-04-13 20:10:27 +02:00
John Ericson
79374b9870
Merge pull request #85167 from Ericson2314/sync-llvm 
compiler-rt-10: Sync flags with previous versions
 2020-04-13 14:07:38 -04:00