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587 Commits

Author SHA1 Message Date
Jonathan Ringer
9bb3fccb5b treewide: pkgs.pkgconfig -> pkgs.pkg-config, move pkgconfig to alias.nix 
continuation of #109595

pkgconfig was aliased in 2018, however, it remained in
all-packages.nix due to its wide usage. This cleans
up the remaining references to pkgs.pkgsconfig and
moves the entry to aliases.nix.

python3Packages.pkgconfig remained unchanged because
it's the canonical name of the upstream package
on pypi.
 2021-01-19 01:16:25 -08:00
Mike Sperber
58b572bfa7 libtensorflow: update TensorFlow-as-library to version 2.4.0 2021-01-12 16:45:03 +01:00
Jonathan Ringer
0137860077 openblas: 0.3.12 -> 0.3.13 2021-01-04 00:22:23 -08:00
github-actions[bot]
581059aed4
Merge staging-next into staging 2021-01-04 00:57:38 +00:00
John Ericson
f52263ced0 treewide: Start to break up static overlay 
We can use use `stdenv.hostPlatform.isStatic` instead, and move the
logic per package. The least opionated benefit of this is that it makes
it much easier to replace packages with modified ones, as there is no
longer any issue of overlay order.

CC @FRidh @matthewbauer
 2021-01-03 19:18:16 +00:00
Ben Siraphob
3ae5e6ce03 treewide: remove enableParallelBuilding = true if using cmake 2021-01-03 18:37:40 +07:00
Ben Siraphob
b04fc593e7 treewide: cmake buildInputs to nativeBuildInputs, minor cleanups 2021-01-01 11:52:33 +07:00
Thomas Tuegel
c3356a6e1c
Merge pull request #97306 from danieldk/openblas-avx512 
openblas: re-enable AVX512 support
 2020-12-29 05:43:05 -06:00
Daniël de Kok
0be441df8b libtorch-bin: 1.7.0 -> 1.7.1 
Changelog:
https://github.com/pytorch/pytorch/releases/tag/v1.7.1
 2020-12-11 07:36:36 +01:00
R. RyanTM
da518c1c1b petsc: 3.14.1 -> 3.14.2 2020-12-09 23:31:34 +00:00
R. RyanTM
dfd949d9b2 magma: 2.5.3 -> 2.5.4 2020-12-06 10:56:20 -08:00
Thomas Tuegel
4a5e1fbc8e
Merge pull request #98485 from doronbehar/pkg/suitesparse 
suitesparse: 5.7.2 -> 5.8.1
 2020-12-04 21:33:22 -06:00
Daniël de Kok
5d8ae7e7b3 mkl: 2020.3.279 -> 2020.4.304 
Release notes:

https://software.intel.com/content/www/us/en/develop/articles/intel-math-kernel-library-release-notes-and-new-features.html
 2020-11-29 08:42:33 +01:00
Daniël de Kok
af0b2ddd82
Merge pull request #104632 from r-ryantm/auto-update/blis 
blis: 0.7.0 -> 0.8.0
 2020-11-28 19:48:03 +01:00
Pavol Rusnak
b431a2bf0c
Merge pull request #103682 from evils/elvis 
fix some dead meta.homepage entries
 2020-11-26 17:35:38 +01:00
Sandro
78a06ae6be
Merge pull request #104305 from r-ryantm/auto-update/petsc 
petsc: 3.14.0 -> 3.14.1
 2020-11-23 14:07:11 +01:00
R. RyanTM
cfe1f2d9ac blis: 0.7.0 -> 0.8.0 2020-11-22 20:51:51 +00:00
R. RyanTM
69dfe8d67a openlibm: 0.7.2 -> 0.7.3 2020-11-22 06:23:37 +00:00
Daniël de Kok
af6dbe82b4
Merge pull request #104265 from danieldk/sync-cudnn-with-toolkit 
cudnn_cudatoolkit_10: 10.1 -> 10.2
 2020-11-20 13:34:18 +01:00
R. RyanTM
a1d06b98ce petsc: 3.14.0 -> 3.14.1 2020-11-19 19:49:01 +00:00
Daniël de Kok
1bdeea7fc8 cudnn_cudatoolkit_10: 10.1 -> 10.2 
cudatoolkit_10 is currently CUDA 10.2, whereas cudnn_cudatoolkit_10
was using CuDNN with CUDA 10.1. This change rectifies that
discrepancy.
 2020-11-19 10:19:54 +01:00
Timo Kaufmann
ff8338343b maintainers: create sage team 
Maintaining all the packages whose updates might break some aspect of
sage.

For reference:
https://github.com/NixOS/nixpkgs/pull/103810#issuecomment-727536510
 2020-11-18 21:27:37 +01:00
Evils
9b3475be26 openlibm: update meta.homepage 2020-11-13 10:06:11 +01:00
Daniël de Kok
da115b4c56
Merge pull request #103120 from danieldk/libtorch-bin-cmake-fix-lib-paths 
libtorch-bin: fix CMake library paths for split outputs
 2020-11-10 12:10:38 +01:00
Frederik Rietdijk
20f001c01e Merge master into staging-next 2020-11-09 14:33:52 +01:00
Daniël de Kok
2802a021e3 libtorch-bin: modify passthru test to capture CMake misconfiguration 2020-11-09 07:49:54 +01:00
Daniël de Kok
e8721af065 libtorch-bin: fix CMake library paths for split outputs 
The libtorch CMake files are in the `dev` output and used relative
paths to locate the shared libraries. This fails, because the
libraries are in the `out` output. This change patches the CMake files
to use library paths from `out`.

See #102146.
 2020-11-09 07:49:54 +01:00
Daniël de Kok
d36077239c
Merge pull request #103078 from danieldk/cleanup-libtorch-bin-test 
libtorch-bin: cleanup passthru test
 2020-11-09 07:49:03 +01:00
Daniël de Kok
a71f07694c libtorch-bin: cleanup passthru test 
- Make passthru.tests an attrset.
- Remove CMake VERBOSE option.
- Remove spurious `cat CMakeLists.txt`.
- Run the test as well.
- Actually test some functionality.
 2020-11-07 13:50:23 +01:00
Frederik Rietdijk
99fb79ae84 Merge master into staging-next 2020-11-06 12:51:56 +01:00
Daniël de Kok
b5d27eb87c mkl: Add a small test program 
The MKL pkg-config files often change and are then incorrect for our
paths. pkg-config validation finds some issues, but not incorrect
paths. So, add a small test program to test whether the generated
pkg-config files can actually be used to build a functioning
binary. Hopefully this catches future regressions.
 2020-11-06 12:18:56 +01:00
Daniël de Kok
702b626570 mkl: Fix pkg-config file 
There was a spurious `intel64` in some library paths.
 2020-11-06 09:55:12 +01:00
R. RyanTM
4d507f9002 petsc: 3.13.4 -> 3.14.0 2020-11-04 07:59:18 +00:00
TredwellGit
d1d536cc07 openblas: 0.3.10 -> 0.3.12 
https://github.com/xianyi/OpenBLAS/releases/tag/v0.3.11
https://github.com/xianyi/OpenBLAS/releases/tag/v0.3.12
 2020-11-01 10:58:02 +01:00
Daniël de Kok
442ba6668f libtorch-bin: 1.6.0 -> 1.7.0 
Changelog:

https://github.com/pytorch/pytorch/releases/tag/v1.7.0
 2020-10-28 13:23:35 +01:00
Ben Siraphob
db74029e3e treewide: remove package names from prefix of descriptions 2020-10-27 09:15:07 -07:00
R. RyanTM
1007e8140a openlibm: 0.7.1 -> 0.7.2 2020-10-26 00:47:50 +00:00
Robert Scott
c873f13eac
Merge pull request #101031 from r-burns/spooles 
spooles: fix build on darwin
 2020-10-19 19:07:03 +01:00
Ryan Burns
c04219a9d5 spooles: fix build on darwin 2020-10-18 13:32:45 -07:00
Timo Kaufmann
e9f8c385c0
Merge pull request #100870 from r-ryantm/auto-update/brial 
brial: 1.2.8 -> 1.2.10
 2020-10-18 10:37:47 +02:00
R. RyanTM
57738e9b6f brial: 1.2.8 -> 1.2.10 2020-10-17 19:37:17 +00:00
Ben Siraphob
683a87dbeb treewide: remove periods from end of package descriptions 2020-10-17 08:22:31 -07:00
Frederik Rietdijk
692d219a93 Merge staging-next into staging 2020-10-06 10:25:58 +02:00
Jonathan Ringer
7902256cfd openblas: enable multiple outputs 2020-10-05 16:15:14 -07:00
Doron Behar
6bbfd17e34 suitesparse: assert that compatible lapack and blas are used 2020-10-01 21:53:44 +03:00
Doron Behar
b34ca89335 suitesparse: 5.7.2 -> 5.8.1 
Update dependencies. Remove not needed `BLAS` and `LAPACK` makeFlags for
non darwin systems.
 2020-10-01 21:53:21 +03:00
Timo Kaufmann
27f084d817
Merge pull request #98779 from r-ryantm/auto-update/libbraiding 
libbraiding: 1.0 -> 1.1
 2020-09-28 11:11:06 +02:00
R. RyanTM
f175cb4478 libbraiding: 1.0 -> 1.1 2020-09-25 18:52:32 +00:00
R. RyanTM
ced2c4a0ec cliquer: 1.21 -> 1.22 2020-09-25 02:29:32 +00:00
Matthew Bauer
c85fc341b0 pytorch: update to use passthru's for checks 
This makes the checks a little easier to understand - we can just
check it in the passthru. Also increase major check for cuda 11.
 2020-09-10 14:23:15 -05:00