Commit Graph

4728 Commits

Author SHA1 Message Date
Frederik Rietdijk
099c13da1b Merge staging-next into master (#44009)
* substitute(): --subst-var was silently coercing to "" if the variable does not exist.

* libffi: simplify using `checkInputs`

* pythonPackges.hypothesis, pythonPackages.pytest: simpify dependency cycle fix

* utillinux: 2.32 -> 2.32.1

https://lkml.org/lkml/2018/7/16/532

* busybox: 1.29.0 -> 1.29.1

* bind: 9.12.1-P2 -> 9.12.2

https://ftp.isc.org/isc/bind9/9.12.2/RELEASE-NOTES-bind-9.12.2.html

* curl: 7.60.0 -> 7.61.0

* gvfs: make tests run, but disable

* ilmbase: disable tests on i686. Spooky!

* mdds: fix tests

* git: disable checks as tests are run in installcheck

* ruby: disable tests

* libcommuni: disable checks as tests are run in installcheck

* librdf: make tests run, but disable

* neon, neon_0_29: make tests run, but disable

* pciutils: 3.6.0 -> 3.6.1

Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/pciutils/versions.

* mesa: more include fixes

mostly from void-linux (thanks!)

* npth: 1.5 -> 1.6

minor bump

* boost167: Add lockfree next_prior patch

* stdenv: cleanup darwin bootstrapping

Also gets rid of the full python and some of it's dependencies in the
stdenv build closure.

* Revert "pciutils: use standardized equivalent for canonicalize_file_name"

This reverts commit f8db20fb3a.
Patching should no longer be needed with 3.6.1.

* binutils-wrapper: Try to avoid adding unnecessary -L flags

(cherry picked from commit f3758258b8895508475caf83e92bfb236a27ceb9)
Signed-off-by: Domen Kožar <domen@dev.si>

* libffi: don't check on darwin

libffi usages in stdenv broken darwin. We need to disable doCheck for that case.

* "rm $out/share/icons/hicolor/icon-theme.cache" -> hicolor-icon-theme setup-hook

* python.pkgs.pytest: setupHook to prevent creation of .pytest-cache folder, fixes #40273

When `py.test` was run with a folder as argument, it would not only
search for tests in that folder, but also create a .pytest-cache folder.
Not only is this state we don't want, but it was also causing
collisions.

* parity-ui: fix after merge

* python.pkgs.pytest-flake8: disable test, fix build

* Revert "meson: 0.46.1 -> 0.47.0"

With meson 0.47.0 (or 0.47.1, or git)
things are very wrong re:rpath handling
resulting in at best missing libs but
even corrupt binaries :(.

When we run patchelf it masks the problem
by removing obviously busted paths.
Which is probably why this wasn't noticed immediately.

Unfortunately the binary already
has a long series of paths scribbled
in a space intended for a much smaller string;
in my testing it was something like
lengths were 67 with 300+ written to it.

I think we've reported the relevant issues upstream,
but unfortunately it appears our patches
are what introduces the overwrite/corruption
(by no longer being correct in what they assume)

This doesn't look so bad to fix but it's
not something I can spend more time on
at the moment.

--

Interestingly the overwritten string data
(because it is scribbled past the bounds)
remains in the binary and is why we're suddenly
seeing unexpected references in various builds
-- notably this is is the reason we're
seeing the "extra-utils" breakage
that entirely crippled NixOS on master
(and probably on staging before?).

Fixes #43650.

This reverts commit 305ac4dade.

(cherry picked from commit 273d68eff8f7b6cd4ebed3718e5078a0f43cb55d)
Signed-off-by: Domen Kožar <domen@dev.si>
2018-07-24 15:04:48 +01:00
Jörg Thalheim
14a481f26b
Merge pull request #44020 from Mic92/black
python3.pkgs.black: 18.4a0 -> 18.6b4
2018-07-24 05:52:30 -04:00
Jörg Thalheim
272f02415c python3.pkgs.black: 18.4a0 -> 18.6b4 2018-07-23 17:40:20 +01:00
Frederik Rietdijk
309cfde81c
Merge pull request #44014 from jluttine/salmon-3.0.2
pythonPackages.salmon-mail: 3.0.1 -> 3.0.2
2018-07-23 16:13:36 +02:00
Jaakko Luttinen
33f3745b45
pythonPackages.salmon-mail: 3.0.1 -> 3.0.2 2018-07-23 17:07:48 +03:00
Robert Schütz
3a0c4a8bf8
python.pkgs.pyyaml: 3.12 -> 3.13 (#43961) 2018-07-22 11:50:51 +02:00
Frederik Rietdijk
6c72782d36 Merge staging-next into master 2018-07-22 11:04:28 +02:00
Benjamin Hipple
bc4c0c4f4d pythonPackages.plaid-python: 2.3.0 -> 2.3.3 (#43905) 2018-07-21 23:09:21 +02:00
Frederik Rietdijk
ad47d658d1 Merge master into staging-next 2018-07-21 19:43:53 +02:00
Jörg Thalheim
218298b30f
Merge branch 'master' into unused5 2018-07-21 15:41:22 +01:00
Robert Schütz
d7cce082b0 remove unused file 2018-07-21 15:34:08 +02:00
Frederik Rietdijk
251a0a9a86
Merge pull request #43860 from volth/unused2
treewide: remove unused 'inherit' in let blocks
2018-07-21 11:13:36 +02:00
Frederik Rietdijk
7db4c3617f
Merge pull request #43809 from Ma27/fix-python-xgboost
pythonPackages.xgboost: fix build
2018-07-21 11:05:44 +02:00
Frederik Rietdijk
7c8af7e9f9
Merge pull request #43837 from pandaman64/qiskit-0.5.7
qiskit: 0.5.4 -> qiskit 0.5.7
2018-07-21 11:04:53 +02:00
volth
52f53c69ce pkgs/*: remove unreferenced function arguments 2018-07-21 02:48:04 +00:00
volth
6d2857a311 [bot] treewide: remove unused 'inherit' in let blocks 2018-07-20 19:38:19 +00:00
Frederik Rietdijk
1a6af9f88e
Merge pull request #43857 from volth/unused
[bot] treewide: remove unreferenced code
2018-07-20 21:06:32 +02:00
volth
87f5930c3f [bot]: remove unreferenced code 2018-07-20 18:48:37 +00:00
Will Dietz
b97a98e524 python3Packages.zconfig: remove test that relies on setlocale failing 2018-07-20 10:15:55 -05:00
Roger Qiu
5fba38d65c pythonPackages.image-match: init at 1.1.2 2018-07-20 07:53:58 +02:00
Frederik Rietdijk
6ed3ea6e74 python.pkgs.scikitimage: 0.12.3 -> 0.14.0 2018-07-20 07:48:39 +02:00
Frederik Rietdijk
9768a80726 python.pkgs.pywavelets: init at 0.5.2 2018-07-20 07:48:38 +02:00
Frederik Rietdijk
9146271578 python.pkgs.scikitimage: move expression 2018-07-20 07:48:38 +02:00
pandaman64
c7fec43ee8 qasm2image: 0.5.0 -> 0.7.0 2018-07-20 13:01:30 +09:00
pandaman64
e97448f7e0 qiskit: 0.5.4 -> 0.5.7 2018-07-20 13:01:30 +09:00
Frederik Rietdijk
8213ff161c Merge master into staging-next 2018-07-19 18:24:24 +02:00
Maximilian Bosch
88a35d8bb5
pythonPackages.xgboost: fix build
The setup.py of `python-package` contains some path resolution magic to
find `libxgboost.so` which is needed for the python API.

Unfortunately the code is incompatible with Nix as it isn't compatible
with the store-based structure for each package and tries to express the
location of the shared object with relative paths.

The detection in `setup.py` and `xgboost/libpath.py` has been either
removed entirely or patched to link to the proper store path of the
`libxgboost` build input.

See https://hydra.nixos.org/build/77702715 for further reference.
2018-07-19 13:32:25 +02:00
Robert Schütz
8ab563d4df
Merge pull request #43693 from Ma27/remove-flask_cache
Remove `pythonPackages.flask_cache`
2018-07-19 08:06:13 +02:00
Matthew Bauer
4ed7a4b993 treewide: preserve hashes from 76999cc40e
76999cc40e changed some hashes resulting in this PR being technically
a mass rebuild. To avoid this, I am restoring some of the hashes (even
though it seems silly). My main goal is to get this PR merged quickly
as treewide changes like this get out-of-date quickly.

This commit should be reverted on the next mass rebuild.
2018-07-19 00:09:01 -04:00
Matthew Bauer
76999cc40e treewide: remove aliases in nixpkgs
This makes the command ‘nix-env -qa -f. --arg config '{skipAliases =
true;}'’ work in Nixpkgs.

Misc...

- qtikz: use libsForQt5.callPackage

  This ensures we get the right poppler.

- rewrites:

  docbook5_xsl -> docbook_xsl_ns
  docbook_xml_xslt -> docbook_xsl

diffpdf: fixup
2018-07-18 23:25:20 -04:00
Maximilian Bosch
1e454c5045
pythonPackages.graphite_api: move expression
According to the current convention python packages should live in
`pkgs/development/python-modules`. As I altered the `graphite_api`
expression previously in d3d1b88873 I decided to move it as well.

Additionally I applied some minor refactorings:

* use `fetchFromGitHub` instead of `fetchgit`.

* use `checkInputs` for test dependencies

* got rid of fixed points

* applied patch which supports flask-caching to 1.3.1 using `git apply
  -3`
2018-07-19 01:26:35 +02:00
Frederik Rietdijk
b3af2cd962
Merge pull request #43694 from Ma27/disable-trezor-python2
pythonPackages.trezor: disable build
2018-07-18 07:18:33 +02:00
Shea Levy
711c56dd67
pythonPackages.simpy: init at 3.0.11. 2018-07-17 17:37:50 -04:00
Maximilian Bosch
ab418335c2
pythonPackages.trezor: disable build
It seems as recent versions of `trezor` don't work with python 2.x:

```
/build/trezor-0.9.1/dist /build/trezor-0.9.1
Processing ./trezor-0.9.1-py2-none-any.whl
trezor requires Python '>=3.3' but the running Python is 2.7.15
builder for '/nix/store/aqyxki0ckanjk4r1f0an4kj1w4s3kk4f-python2.7-trezor-0.9.1.drv' failed with exit code 1
cannot build derivation '/nix/store/gp4smkzc9r87lzajs17jnq4rh2ayc5q0-python2.7-keepkey-4.0.0.drv': 1 dependencies couldn't be built
```
2018-07-17 23:15:57 +02:00
Frederik Rietdijk
12949bf84a Merge master into staging 2018-07-17 10:05:50 +02:00
Frederik Rietdijk
1ae2f10642 Merge staging-next into master 2018-07-17 10:04:59 +02:00
Eduard Bopp
2977fb19ca pythonPackages.parsy: init at 1.2.0 2018-07-17 00:14:49 +02:00
Frederik Rietdijk
6d339e5863 Merge staging-next into staging 2018-07-16 17:14:44 +02:00
Frederik Rietdijk
3c09808160 Merge master into staging-next 2018-07-16 07:43:37 +02:00
Will Dietz
4626d0b255 gnomecast: init at 1.4.0
also pycaption, required dep.
2018-07-15 17:45:16 -05:00
Robert Schütz
eea1776378
Merge pull request #43544 from dotlambda/drop-backports_ssl_match_hostname_3_4_0_2
python.pkgs.backports_ssl_match_hostname_3_4_0_2: remove
2018-07-16 00:33:47 +02:00
Franz Pletz
d34cc21526
Merge pull request #43541 from jfrankenau/update-cura
cura: 3.3.1 -> 3.4.1
2018-07-15 21:45:35 +00:00
Benjamin Hipple
dab1b67f9a pythonPackages.aws-adfs: init at 0.12.0 (#43458) 2018-07-15 17:16:32 +02:00
Robert Schütz
e82de5730f python.pkgs.altair: fix build 2018-07-15 15:41:23 +02:00
Robert Schütz
de0c67572f python.pkgs.vega_datasets: init at 0.5.0 2018-07-15 15:41:23 +02:00
Timo Kaufmann
338f71a338 pythonPackages.cvxopt: re-enable tests (#43566)
This reverts commit 64a64e7483. The issue
was fixed in d2f0fc1f41.
2018-07-15 14:26:33 +02:00
Robert Schütz
18774d4173 Merge branch 'master' into staging 2018-07-15 12:31:18 +02:00
Timo Kaufmann
64a64e7483 pythonPackages.cvxopt: temporarily disable tests (#43564)
The tests have transient failures that will be fixed once staging is
merged.
2018-07-15 12:20:47 +02:00
Robert Schütz
fcc747ffa0 python.pkgs.backports_ssl_match_hostname: move expression 2018-07-15 01:29:39 +02:00
Johannes Frankenau
14abd80d1f python.pkgs.uranium: 3.3.0 -> 3.4.1 2018-07-14 22:53:29 +02:00