Commit Graph

103184 Commits

Author SHA1 Message Date
Justin Bedo
1ac797861b
SnpEff: init at 4.3i 2017-03-08 22:43:50 +01:00
Justin Bedo
076e513b94
varscan: init at 2.4.2 2017-03-08 22:43:49 +01:00
Justin Bedo
4bb50fd08c
picard-tools: init at 2.7.1 2017-03-08 22:43:45 +01:00
Justin Bedo
7f214e6410
bedtools: init at 2.26.0 2017-03-08 22:36:29 +01:00
Justin Bedo
661048c803
platypus: init at 2017-03-07 2017-03-08 22:36:03 +01:00
Jens Grunert
6fb645037d missing dconf in buildInput 2017-03-08 21:39:59 +01:00
Nikolay Amiantov
f36b72107c primus: fix if nvidia is not used
Fixes #23628
2017-03-08 23:10:43 +03:00
Joachim Fasting
116953ffc9
torbrowser: callPackage can fill in missing params from xorg 2017-03-08 20:40:25 +01:00
Tuomas Tynkkynen
9188f2ed8a release.nix: Fix typo 2017-03-08 21:35:31 +02:00
Tuomas Tynkkynen
5f5b87107f raspberrypifw, linux_rpi: 1.20161020 -> 1.20170303 2017-03-08 21:35:31 +02:00
Dan Peebles
4ae5f4d3cc pythonPackages.cryptography: fix test on macOS 10.12
Hydra didn't notice because it's running 10.11.
2017-03-08 14:14:40 -05:00
Joachim Fasting
74f8e0fd7a
torbrowser: 6.5 -> 6.5.1 2017-03-08 20:08:46 +01:00
Daniel Peebles
9dc3c904de Merge pull request #23646 from copumpkin/buildbot-cleanup-take-2
buildbot: fix .withPlugins to propagate inputs
2017-03-08 13:19:45 -05:00
Tuomas Tynkkynen
8dce538640 gtkglextmm: Mark as broken
No release since 2010. Build broken. Sounds like a library, but no
users. GNOME 2 stuff.

http://hydra.nixos.org/build/49554500/nixlog/3
2017-03-08 20:15:36 +02:00
Tuomas Tynkkynen
a3a21a7245 delve: Disable on i686 2017-03-08 20:10:06 +02:00
Joachim Fasting
06520c7fb7
nixos/dnscrypt-proxy: indicate update status
Make it easier for the user to tell when the list is updated
and, at their option, see what changed.
2017-03-08 19:07:53 +01:00
Joachim Fasting
5f27abec23
nixos/dnscrypt-proxy: more fs isolation for the updater
It'd be better to do the update as an unprivileged user; for
now, we do our best to minimize the surface available.  We
filter mount syscalls to prevent the process from undoing the fs
isolation.
2017-03-08 19:07:51 +01:00
Joachim Fasting
e72aaa73ea
nixos/dnscrypt-proxy: support updating before nss is up
Resolve download.dnscrypt.org using hostip with a bootstrap
resolver (hard-coded to Google Public DNS for now), to ensure
that we can get an up-to-date resolver list without working name
service lookups. This makes us more robust to the upstream
resolver list getting out of date and other DNS configuration
problems.

We use the curl --resolver switch to allow https cert validation
(we'd need to do --insecure if using just the ip addr). Note
that we don't rely on https for security but it's nice to have
it ...
2017-03-08 19:07:50 +01:00
Joachim Fasting
adf044e1fb
nixos/dnscrypt-proxy: refactoring
Use mkMerge to make the code a little more ergonomic and easier
to follow (to my eyes, anyway ...).  Also take the opportunity
to do some minor cleanups & tweaks, but no functional changes.
2017-03-08 19:07:44 +01:00
Dan Peebles
ca5a1d927f buildbot: fix .withPlugins to propagate inputs
Before I was just grabbing the immediate dependencies. I _think_ this
will do the right thing by using the pre-existing setup hook to avoid
having to compute the transitive closure myself.
2017-03-08 12:39:44 -05:00
Robin Gloster
32bcda741a
Merge pr/23635, pr/23634 and pr/23633 to fix firefox 2017-03-08 17:51:18 +01:00
Daniel Peebles
a53d5cfaba Merge pull request #23642 from copumpkin/buildbot-cleanup
buildbot: assorted cleanups
2017-03-08 11:29:22 -05:00
Dan Peebles
49b20e5569 buildbot: assorted cleanups
Some changes to be more idiomatic and use stdenv building blocks more.
I also added a `buildbot.withPlugins` instead of the current plugins
mechanism, which forces an unnecessary rebuild of the package and reruns
all the tests. This should be equivalent and more pleasant to use in
practice.
2017-03-08 11:28:44 -05:00
Rickard Nilsson
fb5369dbe9 haskellPackages.streaming-eversion: dontCheck 2017-03-08 17:18:18 +01:00
Franz Pletz
e3b84d71a6
nixpkgs: add aarch64-linux to release-lib
cc #23638
2017-03-08 17:13:34 +01:00
Will Dietz
8d10f1dc5b llvm4: rc3 -> rc4 2017-03-08 09:57:41 -06:00
Will Dietz
3bc5a68a63 llvm4: enable tests 2017-03-08 09:50:04 -06:00
Eelco Dolstra
7a08a44b52 Merge pull request #23638 from grahamc/aarch64-linux
nixpkgs: build aarch64-linux
2017-03-08 16:13:58 +01:00
Michael Alan Dorman
763e21e982 haskell-gi-base: propagate gobjectIntrospection dependency
So the thinking is: anything that needs `haskell-gi-base` is going to
need `gobjectIntrospection` in order to work correctly; by adding this
one `buildDepends` (which therefore gets propagated), we put ourselves
in a position to simplify away a bunch of code in `cabal2nix`.
2017-03-08 15:17:39 +01:00
Michael Alan Dorman
d7496b560e gi-webkit2: fix gi-javascriptcore dependency
This actually depends on the specially-versioned gi-javascriptcore
package.
2017-03-08 15:17:39 +01:00
Peter Simons
c71d1e72b2 LTS Haskell 8.4 2017-03-08 15:17:39 +01:00
Peter Simons
9d9cc7ba5f hackage-packages.nix: automatic Haskell package set update
This update was generated by hackage2nix v2.1-2-g3de0b84 from Hackage revision
e5e1058cde.
2017-03-08 15:17:39 +01:00
Tuomas Tynkkynen
413bc03986 mess: Mark broken
Even fixing the source urls doesn't make it build.
2017-03-08 16:14:19 +02:00
Graham Christensen
bb4c6a7800
nixpkgs: build aarch64-linux 2017-03-08 09:08:31 -05:00
Tuomas Tynkkynen
c8402dde15 libp11: Fetch src from GitHub 2017-03-08 15:31:34 +02:00
Domen Kožar
8bed8fb532 Merge pull request #23636 from fooblahblah/slack-libcurl
Add curl dependency to Slack for calls
2017-03-08 14:00:48 +01:00
Jeff Simpson
01bb228b2a Add curl dependency to Slack for calls 2017-03-08 05:52:40 -07:00
Peter Hoeg
26625c928b neovim-qt: run tests 2017-03-08 20:31:29 +08:00
Peter Hoeg
a9e990b818 neovim: 0.2.5 -> 0.2.6 2017-03-08 20:07:40 +08:00
Alexey Shmalko
28598c01e7
icu: 57.1 -> 58.2
Firefox requires new version of the icu to build:
```
checking for icu-i18n >= 58.1... Requested 'icu-i18n >= 58.1' but version of icu-i18n is 57.1
configure: error: Library requirements (icu-i18n >= 58.1) not met; consider adjusting the PKG_CONFIG_PATH environment variable if your libraries are in a nonstandard prefix so pkg-config can find them.
```
2017-03-08 14:01:39 +02:00
Alexey Shmalko
d4bb1c786f
sqlite: 3.16.2 -> 3.17.0
Firefox requires the latest sqlite to build:
```
checking for sqlite3 >= 3.17.0... Requested 'sqlite3 >= 3.17.0' but version of SQLite is 3.16.2
configure: error: Library requirements (sqlite3 >= 3.17.0) not met; consider adjusting the PKG_CONFIG_PATH environment variable if your libraries are in a nonstandard prefix so pkg-config can find them.
```
2017-03-08 13:39:40 +02:00
Alexey Shmalko
cb670556c5
nss: 3.28.1 -> 3.28.3
This should fix firefox build, which fails due to nss being too old.
2017-03-08 13:27:16 +02:00
Ricardo Ardissone
e17d3d4ef1 gplates: use boost 160
update 161 changed reference parameters for optional
https://hydra.nixos.org/build/49707856/nixlog/1
http://www.boost.org/doc/libs/1_61_0/libs/optional/doc/html/boost_ooptional/relnotes.html
2017-03-08 13:04:34 +02:00
edef
2c02c84cdc verilator: fix Perl shebangs 2017-03-08 11:38:48 +01:00
Peter Hoeg
2c99575c66 neovim-qt: 0.2.4 -> 0.2.5 2017-03-08 17:35:37 +08:00
Peter Simons
060f7cb94d haskell-generic-builder: remove unused nodePackages argument 2017-03-08 09:38:12 +01:00
Peter Simons
f641e9022e Merge pull request #23609 from ljli/hs-lens-pkg-conf
haskell: ghc710x packages: remove superflous configuration for lens
2017-03-08 09:22:17 +01:00
Peter Hoeg
6f68eb7c7e msmtp: use netcat-gnu to unbreak darwin 2017-03-08 16:02:35 +08:00
Peter Simons
722b129652 Merge pull request #23607 from NixOS/haskell/justStaticExecutables
Haskell/just static executables
2017-03-08 08:49:19 +01:00
Eric Bailey
90c5c9d8c9
lilypond-with-fonts: fix typos
In development, I experimented with file globs, for loops and making the
supplementary fonts optional. As such, the original PR ended up with a
dysfunctional combination.

This commit fully adopts the for loop approach, which I prefer, since failing
matches, e.g. missing supplementary-fonts/, won't cause a failure.
2017-03-07 23:02:26 -06:00