volth
f3282c8d1e
treewide: remove unused variables ( #63177 )
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* treewide: remove unused variables
* making ofborg happy
2019-06-16 19:59:05 +00:00
Matthew Bauer
6ed49262f5
treewide: remove BUILD_TESTING flag
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This is now set by CMake
2019-03-11 10:11:28 -04:00
Matthew Bauer
d492f53faf
Merge pull request #50527 from matthewbauer/ninja-check-phase
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Add check phase to ninja setup hook
2018-11-20 16:55:12 -06:00
Matthew Bauer
2c47a4229f
treewide: remove ctest usages
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These are already in the generated makefiles!
2018-11-18 19:31:02 -06:00
schneefux
d81a96e601
mirtk: use fetchFromGitHub instead of fetchgit
2018-10-08 14:33:55 +02:00
Orivej Desh
f0c0e2acc6
htslib: 1.7 -> 1.9
2018-09-21 22:42:28 +00:00
Vladimír Čunát
14aa936ec5
Merge branch 'staging-next' into staging
2018-08-17 20:53:27 +02:00
Vladimír Čunát
cbabebcc2e
Merge branch 'master' into staging-next
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Hydra: ?compare=1473892
2018-08-17 13:45:21 +02:00
Ben Darwin
0adc6f4d8f
mirtk: init at 2.0.0
2018-08-13 15:55:04 -04:00
Jan Malakhovski
b2563a55b7
nifticlib: disable tests
2018-08-11 09:35:38 +00:00
John Ericson
db965063b3
treewide: Make configureFlags lists
2018-08-03 17:06:03 -04:00
Ben Darwin
7a64b0726a
bicgl: init at 2017-09-10
2018-05-09 14:05:29 -04:00
Ben Darwin
1575136ff2
Merge branch 'minc_ecosystem' of github.com:bcdarwin/nixpkgs into minc_ecosystem
2018-04-10 13:35:39 -04:00
Ben Darwin
efb02d3c00
elastix: 4.8 -> 4.9.0
2018-04-10 13:34:29 -04:00
Ben Darwin
12fa2f9fd3
metadata fixes: EBTKS, MNI::Perllib, Text::Format
2018-04-10 00:53:55 -04:00
Ben Darwin
c1488921a0
oobicpl: init at 2016-03-02
2018-04-09 18:07:52 -04:00
Ben Darwin
d094f52112
fix EBTKS version naming
2018-04-09 18:07:15 -04:00
Ben Darwin
c9db4cabc8
bicpl: init at 2017-09-10
2018-04-09 18:07:15 -04:00
Ben Darwin
cf2aac6a04
address license/version issues for PR #29782
2018-04-09 18:06:54 -04:00
Ben Darwin
e7d447ce2c
EBTKS: init at 1.6.50 (develop branch)
2018-04-09 18:06:33 -04:00
Renato Alves
b2284e0454
htslib: 1.6 -> 1.7
2018-02-06 15:37:50 +01:00
Orivej Desh
0acf94bb9f
htslib: fix up
2017-10-01 07:12:52 +00:00
mimadrid
25b17ae1d7
htslib: 1.5.0 -> 1.6.0
2017-09-30 22:14:49 +02:00
Jörg Thalheim
aab8f8df4b
nifticlib: use mirror for sourceforge
2017-09-21 09:10:12 +01:00
Ben Darwin
0d981c5761
nifticlib: init at 2.0.0
2017-09-20 19:04:22 -04:00
mimadrid
302e7825fa
htslib: 1.4.0 -> 1.5.0
2017-08-13 00:16:42 +02:00
Ben Darwin
d1d0824b2f
elastix: change platforms to "linux" from "unix"
2017-07-19 17:41:14 -04:00
Ben Darwin
b21805d972
elastix: init at 4.8
2017-05-23 18:25:15 -04:00
mimadrid
295a23a2db
htslib: 1.3.2 -> 1.4
2017-05-07 23:15:42 +02:00
mimadrid
25c984f940
htslib: 1.3.1 -> 1.3.2
2016-12-23 19:31:44 -05:00
mimadrid
d3da5cbf44
htslib: init at 1.3.1
2016-06-24 21:08:16 +02:00
Domen Kožar
de9f27b07d
remove biolib
2015-01-18 11:52:00 +01:00
Bjørn Forsman
c9baba9212
Fix many package descriptions
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(My OCD kicked in today...)
Remove repeated package names, capitalize first word, remove trailing
periods and move overlong descriptions to longDescription.
I also simplified some descriptions as well, when they were particularly
long or technical, often based on Arch Linux' package descriptions.
I've tried to stay away from generated expressions (and I think I
succeeded).
Some specifics worth mentioning:
* cron, has "Vixie Cron" in its description. The "Vixie" part is not
mentioned anywhere else. I kept it in a parenthesis at the end of the
description.
* ctags description started with "Exuberant Ctags ...", and the
"exuberant" part is not mentioned elsewhere. Kept it in a parenthesis
at the end of description.
* nix has the description "The Nix Deployment System". Since that
doesn't really say much what it is/does (especially after removing
the package name!), I changed that to "Powerful package manager that
makes package management reliable and reproducible" (borrowed from
nixos.org).
* Tons of "GNU Foo, Foo is a [the important bits]" descriptions
is changed to just [the important bits]. If the package name doesn't
contain GNU I don't think it's needed to say it in the description
either.
2014-08-24 22:31:37 +02:00
Mateusz Kowalczyk
7a45996233
Turn some license strings into lib.licenses values
2014-07-28 11:31:14 +02:00
Peter Simons
400d4a03b0
Update references to 'rLang' to the new name 'R'.
2013-07-04 23:41:22 +02:00
Evgeny Egorochkin
9c6f7cc9c1
Add package versions to some of the packages or fix existing ones to conform to nixpkgs conventions.
2013-06-07 03:15:45 +03:00
Eelco Dolstra
5553546c21
Remove a bunch of unreferenced files
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Plus a small number of obsolete packages (like old versions of qemu).
2012-11-29 13:43:37 +01:00
Eelco Dolstra
6609710409
* Get rid of many instances of "args: with args;", and other coding
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guidelines violations.
* Updated libsamplerate to 0.1.7.
svn path=/nixpkgs/trunk/; revision=22782
2010-07-28 11:55:54 +00:00
Pjotr Prins
3ce5cba9c7
Added pkgMaintainer info to these 'biology' section packages.
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svn path=/nixpkgs/trunk/; revision=12987
2008-10-07 15:12:06 +00:00
Pjotr Prins
b3aa5d6bfc
Added meta.pkgMaintainer to biology packages - a claim to fame, or
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you know who to blame!
svn path=/nixpkgs/trunk/; revision=12986
2008-10-07 15:12:01 +00:00
Pjotr Prins
73d2e4f49d
- Some Ruby interpreter bumped version
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- Kernel headers 2.6.18 added (XEN virtual images)
- unifdef package added for kernel headers 2.6.18
- Python Zope and 4suite added
- Trying bioconductor packages with R-lang (still failing)
- Bumped gmp version
- Added rq cluster runner - still requires extra gems (installs, but does not run)
svn path=/nixpkgs/trunk/; revision=12766
2008-08-29 13:53:28 +00:00
Pjotr Prins
07595b0397
Introduced biolib package
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svn path=/nixpkgs/trunk/; revision=12535
2008-08-07 15:01:21 +00:00
Pjotr Prins
289da88ccc
Moved NCBI-tools to applications
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svn path=/nixpkgs/trunk/; revision=12004
2008-06-07 06:34:02 +00:00
Pjotr Prins
d78d018ad8
Added ncbi-tools
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svn path=/nixpkgs/trunk/; revision=12003
2008-06-06 19:42:00 +00:00
