Sandro
ad97ca4e51
Merge pull request #110912 from siraben/stdenv-lib-inherit
...
treewide: remove inherited stdenv.lib
2021-01-27 10:28:55 +01:00
Ben Siraphob
3bbad8b041
treewide: remove inherited stdenv.lib
2021-01-27 12:44:43 +07:00
Thomas Tuegel
0e418a1a18
Merge pull request #108888 from ttuegel/feature--staging--qt-no-mkDerivation
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Qt: Do not require mkDerivation
2021-01-26 16:24:41 -06:00
Phillip Cloud
bba47f95f1
sortmerna: mark broken on darwin
2021-01-26 12:55:33 -05:00
Thomas Tuegel
5590e365e4
qtbase: Check for wrapQtAppsHook in setupHook
2021-01-25 15:56:15 -06:00
Pavol Rusnak
a6ce00c50c
treewide: remove stdenv where not needed
2021-01-25 18:31:47 +01:00
Sandro
ad445d3728
Merge pull request #110735 from jbedo/bedtools
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bedtools: 2.29.2 -> 2.30.0
2021-01-25 11:04:30 +01:00
Ryan Mulligan
afebf1cc9a
Merge pull request #110529 from r-ryantm/auto-update/picard-tools
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picard-tools: 2.24.0 -> 2.24.1
2021-01-24 18:06:28 -08:00
Justin Bedo
d81e79af15
bedtools: 2.29.2 -> 2.30.0
2021-01-25 13:06:22 +11:00
Sandro
a36bf6faf9
Merge pull request #101796 from luc65r/pkg/tilp2
2021-01-25 01:11:50 +01:00
Mario Rodas
214d726b92
Merge pull request #110487 from r-ryantm/auto-update/lean
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lean: 3.24.0 -> 3.25.0
2021-01-24 10:17:35 -05:00
luc65r
3c5f402e6e
tilp2: init at 1.18
2021-01-24 14:06:41 +01:00
luc65r
99d0610e03
gfm: init at 1.08
2021-01-24 14:06:41 +01:00
volth
bc0d605cf1
treewide: fix double quoted strings in meta.description
...
Signed-off-by: Ben Siraphob <bensiraphob@gmail.com>
2021-01-24 19:56:59 +07:00
Pavol Rusnak
90f7338112
treewide: stdenv.lib -> lib
2021-01-24 01:49:49 +01:00
Markus Kowalewski
6dba41fbcb
mpi: use mpi attribute consistently as the default MPI implementations
...
Use the attribute mpi to provide a system wide default MPI
implementation. The default is openmpi (as before).
This now allows for overriding the MPI implentation by using
the overlay mechanism. Build all packages with mpich instead
of the default openmpi can now be achived like this:
self: super:
{
mpi = super.mpich;
}
All derivations that have been using "mpi ? null" to provide optional
building with MPI have been change in the following way to allow for
optional builds with MPI:
{ ...
, mpi
, useMpi ? false
}
2021-01-23 12:15:13 +01:00
R. RyanTM
e1ea0a237a
picard-tools: 2.24.0 -> 2.24.1
2021-01-22 19:10:27 +00:00
R. RyanTM
0119128f9e
lean: 3.24.0 -> 3.25.0
2021-01-22 14:11:46 +00:00
sternenseemann
9212e03c13
acgtk: use dune install
2021-01-21 11:26:26 +01:00
Ryan Mulligan
33784b7228
Merge pull request #110086 from r-ryantm/auto-update/marvin
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marvin: 20.20.0 -> 20.21.0
2021-01-20 23:38:00 -08:00
zowoq
932941b79c
treewide: editorconfig fixes
...
- remove trailing whitespace
- use spaces for indentation
2021-01-21 13:29:54 +10:00
R. RyanTM
427bbe059a
picard-tools: 2.23.9 -> 2.24.0
2021-01-20 20:42:01 +00:00
R. RyanTM
26dba9209f
marvin: 20.20.0 -> 20.21.0
2021-01-20 05:27:37 +00:00
zowoq
759a2cd563
ecopcr: use spaces for indentation
2021-01-20 10:53:10 +10:00
zowoq
31f5dd3f36
treewide: editorconfig fixes
...
- remove trailing whitespace
- use spaces for indentation
2021-01-20 09:11:11 +10:00
R. RyanTM
5eeafdb3ad
kstars: 3.5.0 -> 3.5.1
2021-01-19 18:56:23 +00:00
Jonathan Ringer
9bb3fccb5b
treewide: pkgs.pkgconfig -> pkgs.pkg-config, move pkgconfig to alias.nix
...
continuation of #109595
pkgconfig was aliased in 2018, however, it remained in
all-packages.nix due to its wide usage. This cleans
up the remaining references to pkgs.pkgsconfig and
moves the entry to aliases.nix.
python3Packages.pkgconfig remained unchanged because
it's the canonical name of the upstream package
on pypi.
2021-01-19 01:16:25 -08:00
Jonathan Ringer
200bb8c977
cd-hit: remove non-existent package
2021-01-19 01:16:25 -08:00
Sandro
ed2dbbba22
Merge pull request #109771 from r-ryantm/auto-update/delly
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delly: 0.8.6 -> 0.8.7
2021-01-18 17:36:01 +01:00
R. RyanTM
e776f923e4
elan: 0.10.2 -> 0.10.3
2021-01-18 15:20:28 +00:00
R. RyanTM
a0e1bb6a4b
delly: 0.8.6 -> 0.8.7
2021-01-18 14:22:30 +00:00
Sandro
0b6f223eec
Merge pull request #104756 from Mazurel/qucs-s
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qucs-s: init at 0.0.22
2021-01-18 01:30:34 +01:00
Sandro
fe2882e5d3
Merge pull request #107845 from danielbarter/openbabel3
2021-01-18 00:37:32 +01:00
Sandro Jäckel
197eace081
avogadro: update maintainers
2021-01-18 00:21:49 +01:00
Mauricio Scheffer
f8b69fa6d2
starspace: init at unstable-2021-01-17
2021-01-17 21:31:55 +00:00
Ben Siraphob
badf51221d
treewide: stdenv.lib -> lib
2021-01-16 17:58:11 +07:00
yangm2
c7ebdc8123
verilator: 4.100 -> 4.108
...
Co-authored-by: Austin Seipp <aseipp@pobox.com>
Signed-off-by: Austin Seipp <aseipp@pobox.com>
2021-01-15 21:10:37 -06:00
CRTified
f8c06505db
aliza: 1.98.32 -> 1.98.43
2021-01-15 21:30:55 +01:00
Sandro
403ea9f27c
Merge pull request #97101 from fricklerhandwerk/wxpython
2021-01-15 10:30:05 +01:00
Michael Raskin
d714c53f17
fix mis-merge
2021-01-14 15:26:10 +00:00
Michael Raskin
f2210b7287
Merge branch 'master' into remove-opensmt
2021-01-14 14:22:22 +00:00
fricklerhandwerk
bb2879d593
mavproxy: fix darwin build
2021-01-14 09:26:12 +01:00
Sandro Jäckel
55444ed07f
nasc: Fix compilation with gcc10
2021-01-11 12:08:20 +01:00
Profpatsch
4a7f99d55d
treewide: with stdenv.lib; in meta -> with lib;
...
Part of: https://github.com/NixOS/nixpkgs/issues/108938
meta = with stdenv.lib;
is a widely used pattern. We want to slowly remove
the `stdenv.lib` indirection and encourage people
to use `lib` directly. Thus let’s start with the meta
field.
This used a rewriting script to mostly automatically
replace all occurances of this pattern, and add the
`lib` argument to the package header if it doesn’t
exist yet.
The script in its current form is available at
https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
2021-01-11 10:38:22 +01:00
Jan Tojnar
dd72357155
Merge branch 'master' into staging-next
2021-01-10 23:24:33 +01:00
John Ericson
05b5b5491e
Merge pull request #108507 from Ericson2314/ott-mode
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ott-mode: Factor our from ott
2021-01-10 14:30:59 -05:00
Nikolay Korotkiy
c0575fe0ef
geogebra: 5-0-609-0 → 5-0-620-0, geogebra6: 6-0-609-0 → 6-0-620-0
2021-01-10 20:19:43 +03:00
github-actions[bot]
433c7b069c
Merge master into staging-next
2021-01-10 01:03:35 +00:00
Markus Kowalewski
14caa4b2bf
octopus: 10.0 -> 10.3
2021-01-09 16:32:49 +01:00
Markus Kowalewski
0961d5b998
octopus: update licenses
2021-01-09 16:32:49 +01:00
Michael Weiss
8ae8602bf7
Merge branch 'master' into staging-next
...
Manually resolved a conflict in
pkgs/development/libraries/libbladeRF/default.nix.
2021-01-09 12:16:11 +01:00
Cyril Cohen
9ffd16b385
coqPackages: refactor
2021-01-09 11:56:17 +01:00
github-actions[bot]
ecebf82121
Merge master into staging-next
2021-01-08 12:29:36 +00:00
Gabriel Ebner
5000e5707b
Merge pull request #108717 from Dyazz/libqalculate
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libqalculate: 3.14.0 -> 3.16.0
2021-01-08 11:23:31 +01:00
Dyazz
8cdefb6995
qalculate-gtk: 3.15.0 -> 3.16.0
2021-01-08 08:43:39 +01:00
Jan Tojnar
e6c0c98940
Merge branch 'master' into staging-next
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zynaddsubfx conflict has been updated to 3.0.1, which conflicted with rewrite after 3.0.5 update on a different branch.
2021-01-08 02:07:34 +01:00
Evils
0448f1c082
kicad-unstable: 2020-12-01 -> 2020-12-23
2021-01-07 16:17:41 -05:00
Evils
9be551c1d8
kicad: 5.1.8 -> 5.1.9
2021-01-07 16:17:41 -05:00
Evils
86e29a0b72
kicad: fix update.sh multiple tag reply handling
...
and fix tabs in update.sh
2021-01-07 16:17:41 -05:00
Sandro
7ae17783a7
Merge pull request #108432 from jbedo/fastp
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fastp: init 0.20.1
2021-01-07 21:44:33 +01:00
github-actions[bot]
5c072a088d
Merge master into staging-next
2021-01-07 18:40:50 +00:00
Sandro
ec56bf6ede
Merge pull request #106456 from eduardosm/diylc
2021-01-07 17:24:42 +01:00
Jan Tojnar
f19eb635b4
Merge branch 'master' into staging-next
...
b04fc593e7
2021-01-07 13:04:31 +01:00
Eduardo Sánchez Muñoz
0d84b3f540
diylc: init at 4.15.1
2021-01-07 12:53:35 +01:00
Justin Bedo
bdf3d727ca
fastp: init 0.20.1
2021-01-07 18:24:19 +11:00
Devon Richards
7a16349789
lean: 3.23.0 -> 3.24.0
...
We have to update to be able to use the current version of mathlib.
2021-01-06 21:38:04 -06:00
Сухарик
4746e1717f
sympy: 1.6.2 -> 1.7.1 ( #107663 )
...
* sympy: 1.6.2 -> 1.7.1
* sage: adapt tests to sympy 1.7
Co-authored-by: Mauricio Collares <mauricio@collares.org>
2021-01-06 17:10:30 +00:00
Sandro
0af4d59732
Merge pull request #108437 from jbedo/varscan
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varscan: 2.4.2 -> 2.4.4
2021-01-06 00:19:30 +01:00
Sandro
31d6b1cd06
Merge pull request #108435 from jbedo/last
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last: 1145 -> 1170
2021-01-06 00:18:41 +01:00
Guillaume Girol
f3e84c4d42
Merge pull request #107416 from hjones2199/phd2wrap
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phd2: add GApps wrapper to fix breakage on non-nixos wayland systems
2021-01-05 20:09:24 +00:00
John Ericson
4eb13669a0
ott: Don't also install emacs mode
...
There is now a separate package for that.
2021-01-05 14:41:52 -05:00
Anderson Torres
0972bbc12d
Merge pull request #108445 from AndersonTorres/updates
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Misc updates
2021-01-05 11:54:15 -03:00
AndersonTorres
e8183d4687
magic-vlsi: 8.3.80 -> 8.3.109
...
Also, add myself to maintainers list.
2021-01-05 10:49:00 -03:00
Sandro
f53c431645
Merge pull request #108379 from SuperSandro2000/cleanups
2021-01-05 02:19:24 +01:00
Justin Bedo
56dd3fa172
varscan: 2.4.2 -> 2.4.4
2021-01-05 10:55:28 +11:00
Justin Bedo
62432c855f
last: 1145 -> 1170
2021-01-05 10:29:31 +11:00
Frederik Rietdijk
b20838eb4a
Merge staging-next into staging
2021-01-04 20:51:32 +01:00
Pavol Rusnak
bf77245202
Merge pull request #108219 from prusnak/viennarna
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ViennaRNA: init at 2.4.17
2021-01-04 18:04:56 +01:00
markuskowa
d480c86858
Merge pull request #107223 from markuskowa/upd-qe
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quantum-espresso: 6.5 -> 6.6
2021-01-04 14:33:37 +01:00
Sandro
6ac4c2d1f6
Merge pull request #107962 from flyfloh/colmap-36
2021-01-04 14:25:21 +01:00
Sandro Jäckel
a8d360eca3
raxml: cleanup
2021-01-04 11:02:16 +01:00
github-actions[bot]
07165c7226
Merge staging-next into staging
2021-01-03 18:38:32 +00:00
John Ericson
b03fdcc7f9
Merge pull request #108300 from siraben/parallel-cmake
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treewide: remove enableParallelBuilding = true if using cmake
2021-01-03 13:22:09 -05:00
Pavol Rusnak
77364ac7c0
Merge pull request #108251 from prusnak/bowtie2
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bowtie2: 2.3.5.1 -> 2.4.2
2021-01-03 13:47:45 +01:00
github-actions[bot]
0649757570
Merge staging-next into staging
2021-01-03 12:24:59 +00:00
Ben Siraphob
3ae5e6ce03
treewide: remove enableParallelBuilding = true if using cmake
2021-01-03 18:37:40 +07:00
Sandro
6ae069c990
Merge pull request #108249 from prusnak/bowtie
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bowtie: init at at 1.3.0
2021-01-03 10:03:24 +01:00
zowoq
fb2311d430
Merge staging-next into staging
2021-01-03 16:33:28 +10:00
Pavol Rusnak
9139eb5aee
bowtie2: 2.3.5.1 -> 2.4.2
2021-01-02 22:18:32 +01:00
Pavol Rusnak
03b99f0721
bowtie: init at at 1.3.0
2021-01-02 19:46:59 +01:00
Maximilian Bosch
097cd34db0
Merge pull request #108126 from Ma27/cleanup-maintained-pkgs
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treewide: remove maintainership of `ma27` from a few packages
2021-01-02 18:58:26 +01:00
Pavol Rusnak
cb0b77e2f5
ViennaRNA: init at 2.4.17
2021-01-02 18:53:31 +01:00
Sandro
84c3e129cc
Merge pull request #108190 from lopsided98/qgroundcontrol-update
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qgroundcontrol: 4.0.10 -> 4.0.11
2021-01-02 09:55:16 +01:00
Ben Wolsieffer
92e3304792
qgroundcontrol: 4.0.10 -> 4.0.11
2021-01-01 22:22:20 -05:00
freezeboy
9fd99b5a32
opensmt: 20101017 -> 2.0.1
2021-01-01 23:38:04 +01:00
Sandro
0336dda91b
Merge pull request #108113 from r-ryantm/auto-update/nanovna-saver
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nanovna-saver: 0.3.7 -> 0.3.8
2021-01-01 21:10:11 +01:00
Maximilian Bosch
e7d1be840c
treewide: remove maintainership of ma27 from a few packages
...
Those are packages I don't use anymore for a longer time and I therefore
don't think that listing me as maintainer is a good idea. If those
should be removed now, I'd be fine with that.
SuperSandro2000 will take care of a few packages[1].
[1] https://github.com/NixOS/nixpkgs/pull/108126#pullrequestreview-560599381
2021-01-01 19:48:01 +01:00
github-actions[bot]
0eb369d907
Merge staging-next into staging
2021-01-01 18:39:12 +00:00
Dmitry Kalinkin
8bee208bf8
Merge pull request #107335 from veprbl/pr/root_6_20_08
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root: 6.18.04 -> 6.22.06, don't build vendored LLVM
2021-01-01 12:28:37 -05:00
R. RyanTM
43a4341bf7
nanovna-saver: 0.3.7 -> 0.3.8
2021-01-01 10:47:03 +00:00
Ben Siraphob
b04fc593e7
treewide: cmake buildInputs to nativeBuildInputs, minor cleanups
2021-01-01 11:52:33 +07:00
Florian Pester
b740afa546
colmap: 3.5 -> 3.6
2020-12-31 09:56:07 +01:00
Florian Pester
75eef96f08
colmapWithCuda: fix build
2020-12-31 09:56:07 +01:00
Pavol Rusnak
1017eb06b1
Merge pull request #101227 from herberteuler/fix/mathematica-12.1.1-opencv4
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mathematica: use opencv4
2020-12-29 23:41:09 +01:00
Doron Behar
7c304d037f
Merge pull request #104848 from hjones2199/kstars-up
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kstars: 3.4.3 -> 3.5.0
2020-12-28 00:16:21 +02:00
Doron Behar
6f8710ae1e
Merge pull request #107545 from wucke13/mission-planner
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mission-planner: init at version 1.3.74
2020-12-28 00:02:53 +02:00
Hunter Jones
7d42517d83
kstars: 3.4.3 -> 3.5.0
2020-12-27 14:00:39 -06:00
freezeboy
3c89e637e8
bcal: 1.9 -> 2.2
2020-12-27 17:52:28 +01:00
wucke13
54c2534c3b
mission-planner: init at version 1.3.74
2020-12-26 21:39:02 +01:00
Markus Kowalewski
1ba79ed57f
openmolcas: set platform to x86-64-linux
...
This is the main development platforms. Others are not
officially supported.
2020-12-26 16:58:58 +01:00
Markus Kowalewski
c3fadb95f4
openmolcas: fix fallout from #83888
...
Removed non-functional lines.
Openmolcas does not build with the blas/lapack switching mechanism
2020-12-26 01:55:46 +01:00
R. RyanTM
2c3ca45515
mavproxy: 1.8.29 -> 1.8.30
2020-12-24 08:35:40 -08:00
lsix
156b9cc570
Merge pull request #107482 from lsix/gama-2.12
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gama: 2.09 -> 2.12
2020-12-24 08:22:07 +00:00
Matthias Beyer
fd4a486dea
gama: 2.09 -> 2.12
...
Signed-off-by: Matthias Beyer <mail@beyermatthias.de>
2020-12-23 16:58:32 +00:00
freezeboy
8db56b4525
kstars: add optional dependencies
2020-12-23 17:22:41 +01:00
freezeboy
d63dc152e9
kstars: use mkDerivation instead of wrapQtAppsHook
2020-12-23 17:21:46 +01:00
Hunter Jones
bc28967a18
phd2: add GApps wrapper to fix breakage on non-nixos wayland systems
2020-12-22 12:12:13 -06:00
Dmitry Kalinkin
a30bff21e8
root: use llvm_5 from nixpkgs
2020-12-21 18:24:25 -05:00
Dmitry Kalinkin
b7e70092c5
root: 6.20.08 -> 6.22.06
2020-12-21 16:43:09 -05:00
FliegendeWurst
e49c1a0027
mathematica: 12.1.1 -> 12.2.0 ( #107309 )
2020-12-21 12:55:28 -05:00
Dmitry Kalinkin
7d6e0d5324
root: 6.18.04 -> 6.20.08
2020-12-20 23:49:54 -05:00
Justin Bedo
3a65e29d4b
SPAdes: add python dependency
2020-12-21 08:29:57 +11:00
Markus Kowalewski
7139a58f50
quantum-espresso: 6.5 -> 6.6
2020-12-19 21:14:40 +01:00
Timo Kaufmann
afead527c4
Merge pull request #105615 from collares/sage-update
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sage: 8.9 -> 9.2
2020-12-19 18:13:16 +01:00
Millian Poquet
15ab96d5a7
simgrid: 3.25 -> 3.26
2020-12-19 14:03:33 +01:00
Vincent Laporte
66c0fc3609
cryptoverif: 2.03pl1 → 2.04
2020-12-18 08:20:10 +01:00
Vincent Laporte
b49a3fb852
cryptoverif: fix search for default library
2020-12-18 08:20:10 +01:00
Vincent Laporte
c5556b7454
coq_8_12: 8.12.1 → 8.12.2
2020-12-16 07:45:54 +01:00
Vincent Laporte
de8205f8bb
coq_8_13: init at 8.13+β1
2020-12-15 21:13:40 +01:00
Mauricio Collares
8100c5a44b
sage: 8.9 -> 9.2 fixups
2020-12-15 16:51:42 -03:00
Mauricio Collares
8b8cae779f
pari: update tarball location, since it moved
2020-12-15 16:46:43 -03:00
Mauricio Collares
4058e45736
nauty: update tarball sha256
...
The old `nauty` tarball is currently accessible at
https://distfiles.macports.org/nauty/nauty27r1.tar.gz . The diff is a
single line in genbg.c:
- SUMMARY(&nout,t2-t1);
+ SUMMARY(nout,t2-t1);
2020-12-15 16:46:43 -03:00
Mauricio Collares
cf6364bed2
pynac: import patch to avoid deprecation warnings on python3.8
2020-12-14 19:24:19 -03:00
Mauricio Collares
5df948d4cc
giac: 1.5.0-21 -> 1.5.0-87
2020-12-14 19:24:18 -03:00
Masanori Ogino
5c4136daf7
sage: 8.9 -> 9.2
2020-12-14 19:24:18 -03:00
Mario Rodas
7666fb25d0
Merge pull request #106856 from jbedo/delly
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delly: 0.8.5 -> 0.8.6
2020-12-14 08:10:03 -05:00
Ryan Mulligan
41cdb14aac
Merge pull request #106611 from r-ryantm/auto-update/picard-tools
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picard-tools: 2.23.8 -> 2.23.9
2020-12-13 15:28:16 -08:00
Justin Bedo
6ce06dccfc
delly: 0.8.5 -> 0.8.6
2020-12-14 09:55:57 +11:00
Robert Scott
d81a6bb6f2
hal-hardware-analyzer: 2.0.0 -> 3.1.9
2020-12-11 22:37:04 +00:00
Mario Rodas
8006772a05
Merge pull request #106612 from alyssais/cedille
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cedille: 1.1.1 -> 1.1.2; fix build
2020-12-11 07:37:18 -05:00
Jörg Thalheim
a1cacefde5
Merge pull request #106480 from SCOTT-HAMILTON/spdlog
2020-12-11 07:45:06 +00:00
Sandro
f1e3b5160e
Merge pull request #103338 from hjones2199/siril
2020-12-11 07:35:23 +01:00
Hunter Jones
69741a7a48
siril: init at 0.99.6
2020-12-11 00:07:30 -06:00
Alyssa Ross
8b8dfc5d40
cedille: 1.1.1 -> 1.1.2; fix build
2020-12-10 23:07:32 +00:00
R. RyanTM
aa2148eb1f
picard-tools: 2.23.8 -> 2.23.9
2020-12-10 23:06:36 +00:00
SCOTT-HAMILTON
d98fae8072
Update pkgs/applications/science/electronics/hal-hardware-analyzer/default.nix
...
Co-authored-by: Drew <drewrisinger@users.noreply.github.com>
2020-12-10 16:35:46 +01:00
SCOTT-HAMILTON
ddf90cb942
spdlog: use nixpkgs' fmt instead of bundled one
2020-12-10 10:47:00 +01:00
markuskowa
ba5c6f6075
Merge pull request #105133 from markuskowa/fix-gromacs
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Gromacs: fix SIMD flags, and OpenMP
2020-12-08 09:10:38 +01:00
R. RyanTM
cec747d712
clingo: 5.4.0 -> 5.4.1
2020-12-07 13:03:03 +00:00
Ben Gamari
c98ce627d4
kicad-unstable: 2020-11-07 -> 2020-12-01 ( #105743 )
2020-12-03 19:17:32 -05:00
R. RyanTM
b3f3197266
mavproxy: 1.8.27 -> 1.8.29
2020-12-03 14:33:38 +00:00
Sandro
30cdc8be48
Merge pull request #105650 from r-ryantm/auto-update/gretl
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gretl: 2020b -> 2020e
2020-12-02 20:22:27 +01:00
Ryan Mulligan
4ce30eb63a
Merge pull request #105672 from r-ryantm/auto-update/hmmer
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hmmer: 3.3.1 -> 3.3.2
2020-12-02 05:45:57 -08:00
Austin Seipp
e601758166
abc-verifier: 2020.06.22 -> 2020.11.24
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Signed-off-by: Austin Seipp <aseipp@pobox.com>
2020-12-02 07:18:05 -06:00
Mario Rodas
d48bc3e815
Merge pull request #105654 from r-ryantm/auto-update/gmsh
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gmsh: 4.7.0 -> 4.7.1
2020-12-02 05:15:45 -05:00
Austin Seipp
a3ae8a4fcf
Merge pull request #100750 from arcz/boolector
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boolector: enable darwin build
2020-12-02 03:19:54 -06:00
R. RyanTM
6f50c5b18e
hmmer: 3.3.1 -> 3.3.2
2020-12-02 09:00:15 +00:00
R. RyanTM
cf89444f1e
gmsh: 4.7.0 -> 4.7.1
2020-12-02 05:50:47 +00:00
R. RyanTM
f9a694106b
gretl: 2020b -> 2020e
2020-12-02 04:45:07 +00:00
Ben Darwin
ee7d83e648
ants: unbreak on Darwin
2020-12-01 14:17:54 -05:00
Markus Kowalewski
e90cff90f1
openmolcas: fix hash
2020-11-30 23:05:14 +01:00
Justin Bedo
5fc6258043
bwa: expand supported platforms
2020-11-30 09:46:51 +11:00
Artur Cygan
da3c0ca0dd
boolector: fix darwin build
2020-11-29 22:31:54 +01:00
Artur Cygan
38e6f15d98
btor2tools: fix install_name on darwin
2020-11-29 22:31:31 +01:00
Vincent Laporte
8ee7c2505f
proverif: install emacs mode
2020-11-29 14:05:14 +01:00
Sandro
4dc26ca31d
Merge pull request #92646 from r-ryantm/auto-update/tla-toolbox
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tlaplusToolbox: 1.6.0 -> 1.7.0
2020-11-29 04:01:21 +01:00
Sandro
2c0389680c
Merge pull request #90075 from dmrauh/add/gretl
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gretl: init at 2020b
2020-11-28 22:10:05 +01:00
Dominik Michael Rauh
5f10cd5e0b
gretl: init at 2020b
2020-11-28 21:37:30 +01:00
Doron Behar
56a2c8bb22
Merge pull request #104171 from freezeboy/unbreak-dsview-qt515
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dsview: 0.99 -> 1.12
2020-11-28 17:55:25 +02:00
Timo Kaufmann
819a2c571a
Merge pull request #105212 from r-ryantm/auto-update/jmol
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jmol: 14.31.17 -> 14.31.18
2020-11-28 10:46:52 +01:00
R. RyanTM
e5f757954a
jmol: 14.31.17 -> 14.31.18
2020-11-28 06:51:19 +00:00
Sandro
85fe68bbc0
Merge pull request #105197 from r-ryantm/auto-update/igv
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igv: 2.8.12 -> 2.8.13
2020-11-28 04:05:05 +01:00
R. RyanTM
212ba486d6
igv: 2.8.12 -> 2.8.13
2020-11-28 02:18:00 +00:00
Sandro
ec421ca248
Merge pull request #100532 from piegamesde/fix-desktopitems
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treewide: Fix broken desktop files and mark packages as broken
2020-11-27 22:27:59 +01:00
Markus Kowalewski
58e1666a58
gromacs: fix SIMD flags, and OpenMP
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* make CPU acceleration selectable.
* update cmake flag for acceleration CPU_ACCELERATION -> SIMD
GMX_CPU_ACCELERATION is outdated and has been ignored.
* add hwloc to inputs
* always build with OpenMP
* change name -> pname
2020-11-27 13:59:01 +01:00
Michael Raskin
3ed321dfab
z3: enable build on non-x86_64 unix; checked the build on aarch64-linux
2020-11-27 11:52:07 +01:00
Sandro
41408091bb
Merge pull request #105111 from r-ryantm/auto-update/workcraft
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workcraft: 3.3.1 -> 3.3.2
2020-11-27 03:12:56 +01:00
R. RyanTM
b25018203b
workcraft: 3.3.1 -> 3.3.2
2020-11-27 01:53:34 +00:00
Sandro
6ecdb286b0
Merge pull request #101464 from Synthetica9/redirected-urls
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treewide: ran ./maintainers/scripts/update_redirected_urls.sh
2020-11-27 01:27:24 +01:00
Patrick Hilhorst
a6b3bb24e4
treewide: ran ./maintainers/scripts/update_redirected_urls.sh
2020-11-27 01:23:57 +01:00
Sandro
b08b773f24
Merge pull request #101807 from cheriimoya/pspp
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pspp 1.2.0 -> 1.4.1
2020-11-27 00:35:16 +01:00
Gabriel Ebner
56ffa7a9e4
Merge pull request #105055 from r-ryantm/auto-update/qalculate-gtk
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qalculate-gtk: 3.14.0 -> 3.15.0
2020-11-26 19:04:24 +01:00
R. RyanTM
8c1f644cc7
qalculate-gtk: 3.14.0 -> 3.15.0
2020-11-26 17:48:20 +00:00
Sandro
605ecee7de
Merge pull request #102200 from hjones2199/master
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phd2: init at 2.6.9dev1
2020-11-26 02:28:06 +01:00
Sandro
c2d728f195
Merge pull request #102140 from SuperSandro2000/patch-2
2020-11-26 01:00:22 +01:00
Sandro
28cb61eb5d
Merge pull request #104933 from tadfisher/horizon-eda
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horizon-eda: 1.2.1 -> 1.3.0
2020-11-26 00:45:09 +01:00
Sandro
d8b570e6c8
Merge pull request #98363 from jbedo/mosdepth
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mosdepth: 0.2.9 -> 0.3.1
2020-11-25 23:55:47 +01:00
Sandro
e166f22759
tebreak: Fix tests
2020-11-25 21:36:38 +01:00
Sandro
5f2997686c
deeptools: Fix tests
2020-11-25 21:36:37 +01:00
Tad Fisher
40db868048
horizon-eda: 1.2.1 -> 1.3.0
2020-11-25 12:23:45 -08:00
Sandro
b73851877c
Merge pull request #104866 from r-ryantm/auto-update/MAVProxy
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mavproxy: 1.8.24 -> 1.8.27
2020-11-25 17:42:18 +01:00
R. RyanTM
3174ae1723
mavproxy: 1.8.24 -> 1.8.27
2020-11-25 05:57:05 +00:00
Hunter Jones
d14952311e
phd2: init at 2.6.9dev1
2020-11-24 21:31:58 -06:00
Sandro
ea49bac768
Merge pull request #99761 from fgaz/key/init
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key: init at 2.6.3
2020-11-25 01:49:25 +01:00
Mazurel
880974a84d
qucs-s: init at 0.0.22
2020-11-24 19:24:38 +01:00
Graham Christensen
bc49a0815a
utillinux: rename to util-linux
2020-11-24 12:42:06 -05:00
Sandro
3da89983fd
Merge pull request #103590 from r-ryantm/auto-update/workcraft
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workcraft: 3.3.0 -> 3.3.1
2020-11-24 02:07:43 +01:00
Sandro
b3f5ff2005
Merge pull request #103703 from r-ryantm/auto-update/gmsh
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gmsh: 4.6.0 -> 4.7.0
2020-11-24 01:57:36 +01:00
Timo Kaufmann
e4af85f1d8
Merge pull request #104476 from refnil/pynac
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pynac: use python3 instead of python2
2020-11-23 22:26:38 +01:00
R. RyanTM
3b17793827
star: 2.7.5c -> 2.7.6a
2020-11-23 20:40:05 +01:00
Sandro
b2219a326b
Merge pull request #101922 from penguwin/nextinspace
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nextinspace: init at 1.0.6
2020-11-23 20:09:09 +01:00
Ryan Mulligan
5417bf80f5
Merge pull request #104395 from r-ryantm/auto-update/MAVProxy
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mavproxy: 1.8.23 -> 1.8.24
2020-11-21 19:42:33 -08:00
freezeboy
9950899236
xflr5: migrate to Qt5.15
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rewrite without wrapQtAppsHook and stdenv
2020-11-20 22:24:19 +01:00
freezeboy
f2335a5d98
appcsxcad: migrate to Qt5.15
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* remove useless wrapQtAppsHook
2020-11-20 22:24:18 +01:00
freezeboy
ed7a64c4ee
qcsxcad: migrate to Qt511 + additional cleanup
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* Split into multiple outputs
* Rewrite the derivation without stdenv
2020-11-20 22:24:18 +01:00
Martin Lavoie
30afa507a3
pynac: use python3 instead of python2
2020-11-20 20:46:43 +01:00
R. RyanTM
4615d67ac6
mavproxy: 1.8.23 -> 1.8.24
2020-11-20 17:43:07 +00:00
Austin Seipp
00c451ad40
librepcb: touch ups, co-maintain
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Fixes a bug where the build system tried to call `git` to embed the
release tag revision into the binary, which isn't allowed. Easily fixed
with `substituteInPlace`.
Also updates the expression to be a little closer to "standard"
expressions (e.g. consistent indentation, importing `stdenv` instead of
`lib` and `mkDerivation`, etc.)
Signed-off-by: Austin Seipp <aseipp@pobox.com>
2020-11-20 07:36:27 -06:00
R. RyanTM
26803925aa
ngspice: 32 -> 33
2020-11-19 22:57:08 -08:00
Dmitry Kalinkin
209480e580
Merge pull request #104103 from veprbl/pr/snakemake_5_28_0
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snakemake: 5.19.3 -> 5.28.0
2020-11-19 20:37:25 -05:00
Ben Gamari
7263f7c433
mathematica: Prefer building locally ( #100856 )
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There is little benefit to copying a 4GB tarball over the network,
just to perform an I/O-bound operation and then copy the
multi-gigabyte result back.
2020-11-19 19:42:22 -05:00
Timo Kaufmann
e04721b289
Merge pull request #104083 from timokau/sage-maintainers-team
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maintainers: create sage team
2020-11-19 19:20:49 +01:00
Jörg Thalheim
72f6df338d
remove genesis maintainer
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genesis has no longer access to github
2020-11-18 22:37:56 -08:00
R. RyanTM
5a4772e260
marvin: 20.19.0 -> 20.20.0
2020-11-18 21:03:39 +00:00
Timo Kaufmann
b7319d2d35
maintainers: add raskin to the sage team
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https://github.com/NixOS/nixpkgs/pull/104083#issuecomment-729168625
2020-11-18 21:29:24 +01:00
Timo Kaufmann
ff8338343b
maintainers: create sage team
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Maintaining all the packages whose updates might break some aspect of
sage.
For reference:
https://github.com/NixOS/nixpkgs/pull/103810#issuecomment-727536510
2020-11-18 21:27:37 +01:00
freezeboy
00b385c612
dsview: 0.99 -> 1.12
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Adapted the patches and took a commit from upstream master branch to
allow the migration to Qt5.15.
Had to copy the patch because of the custom sourceRoot.
2020-11-18 15:36:11 +01:00
Dmitry Kalinkin
68e06c19d6
snakemake: 5.19.3 -> 5.28.0
2020-11-17 17:37:35 -05:00
Nicolas Martin
9af958340a
nextinspace: init at 1.0.6
2020-11-17 15:41:53 +01:00
Oleksii Filonenko
512c3c0a05
maintainers: rename filalex77 -> Br1ght0ne
2020-11-17 13:09:31 +02:00
Ryan Mulligan
80b6df2a17
Merge pull request #103525 from r-ryantm/auto-update/samblaster
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samblaster: 0.1.24 -> 0.1.26
2020-11-16 19:03:03 -08:00
Austin Seipp
4b21cf786c
Merge pull request #102943 from prusnak/verilog
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verilog: unstable-2020-08-24 -> 11.0
2020-11-15 21:19:22 -06:00
Anderson Torres
25afd6a3ec
Merge pull request #103768 from AndersonTorres/wip-antiprism
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antiprism: init at 0.26
2020-11-15 19:43:57 -03:00
Vincent Laporte
2806eb2743
coq_8_12: 8.12.0 → 8.12.1
2020-11-15 12:03:15 +01:00
Ryan Mulligan
47fe890182
Merge pull request #103751 from r-ryantm/auto-update/last
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last: 1133 -> 1145
2020-11-14 15:08:46 -08:00
Ryan Mulligan
306960bf1c
Merge pull request #103776 from r-ryantm/auto-update/MAVProxy
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mavproxy: 1.8.22 -> 1.8.23
2020-11-14 13:34:35 -08:00
Pavol Rusnak
610d337764
vhd2vl: fix compatibility with verilog 11.0
2020-11-14 20:15:09 +01:00
Pavol Rusnak
960b4816a5
verilog: unstable-2020-10-24 -> 11.0
2020-11-14 20:15:09 +01:00
R. RyanTM
e3cf6e12bc
fahcontrol: 7.6.13 -> 7.6.21 ( #103677 )
2020-11-14 16:39:37 +00:00
R. RyanTM
68f44d990d
fahviewer: 7.6.13 -> 7.6.21 ( #103688 )
2020-11-14 16:39:20 +00:00
Mario Rodas
7408e58969
Merge pull request #103731 from r-ryantm/auto-update/igv
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igv: 2.8.11 -> 2.8.12
2020-11-14 06:31:47 -05:00
Timo Kaufmann
99aab4ff25
Merge pull request #103749 from r-ryantm/auto-update/jmol
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jmol: 14.31.14 -> 14.31.17
2020-11-14 09:53:01 +01:00
Timo Kaufmann
9a18684661
Merge pull request #103706 from r-ryantm/auto-update/gp2c
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gp2c: 0.0.11pl4 -> 0.0.12
2020-11-14 09:52:34 +01:00
R. RyanTM
df7db2b3ed
mavproxy: 1.8.22 -> 1.8.23
2020-11-14 06:25:20 +00:00
AndersonTorres
f61b91cec4
antiprism: init at 0.26
2020-11-14 00:37:10 -03:00
R. RyanTM
a698dfa0a2
last: 1133 -> 1145
2020-11-13 23:30:53 +00:00
R. RyanTM
dd8591d752
jmol: 14.31.14 -> 14.31.17
2020-11-13 22:05:46 +00:00
R. RyanTM
82d1113013
igv: 2.8.11 -> 2.8.12
2020-11-13 18:25:51 +00:00
R. RyanTM
3457f85820
gp2c: 0.0.11pl4 -> 0.0.12
2020-11-13 14:37:53 +00:00
R. RyanTM
a36f37b778
gmsh: 4.6.0 -> 4.7.0
2020-11-13 14:19:59 +00:00
Austin Seipp
c1661fa7e1
magic-vlsi: 8.3.5 -> 8.3.80, co-maintain
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Signed-off-by: Austin Seipp <aseipp@pobox.com>
2020-11-12 15:23:03 -06:00
Austin Seipp
58a906a7bf
iverilog: unstable-2020-08-24 -> unstable-2020-10-24
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Signed-off-by: Austin Seipp <aseipp@pobox.com>
2020-11-12 15:23:02 -06:00
R. RyanTM
8acd7a3540
workcraft: 3.3.0 -> 3.3.1
2020-11-12 10:54:47 +00:00
R. RyanTM
d1baaef83d
samblaster: 0.1.24 -> 0.1.26
2020-11-12 01:43:02 +00:00
R. RyanTM
f7485d07b5
lean: 3.21.0 -> 3.23.0
2020-11-11 15:16:44 -08:00
Gabriel Ebner
05d27ba19b
Merge pull request #103256 from r-ryantm/auto-update/qalculate-gtk
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qalculate-gtk: 3.13.0 -> 3.14.0
2020-11-10 11:16:30 +01:00
R. RyanTM
3664e4929f
qalculate-gtk: 3.13.0 -> 3.14.0
2020-11-10 01:49:59 +00:00
Frederik Rietdijk
20f001c01e
Merge master into staging-next
2020-11-09 14:33:52 +01:00
Hunter Jones
5041cbc691
kstars: 2.9.8 -> 3.4.3
2020-11-09 12:21:31 +00:00
Luz
3bf8df2877
librepcb: 0.1.4 -> 0.1.5
2020-11-09 11:56:58 +00:00
Samuel Gräfenstein
22b73d1282
pkgs/*: add final newline to .nix files
2020-11-09 11:39:28 +00:00
Orivej Desh
0c75dfb732
convertall: init at 0.8.0 ( #103108 )
2020-11-09 01:45:09 +00:00
Masanori Ogino
88de0d7354
maxima: 5.42.2 -> 5.44.0 ( #102861 )
...
Reference: https://sourceforge.net/p/maxima/code/ci/master/tree/ChangeLog-5.43.md
Reference: https://sourceforge.net/p/maxima/code/ci/master/tree/ChangeLog-5.44.md
Signed-off-by: Masanori Ogino <167209+omasanori@users.noreply.github.com>
2020-11-08 19:29:53 -05:00
markuskowa
428bea042e
Merge pull request #102296 from r-ryantm/auto-update/gromacs
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gromacs: 2020.3 -> 2020.4
2020-11-08 11:31:54 +01:00
Evils
a52e974cff
kicad-unstable: 2020-10-09 -> 2020-11-07
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patch for issue 72248 no longer applies
issue doesn't seem to occur without it anymore...
2020-11-07 16:29:52 +01:00
Evils
905134a79f
kicad: 5.1.7 -> 5.1.8
2020-11-07 16:29:52 +01:00
Evils
50ec961174
kicad: fix update.sh bootstrapping
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it will now correctly build a version.nix file from scratch
2020-11-07 16:29:52 +01:00
Evils
756f36b554
kicad: 5.1.6 -> 5.1.7
2020-11-07 16:29:52 +01:00
Jan Tojnar
a821be7531
Merge branch 'master' into staging-next
2020-11-05 09:42:47 +01:00
Gabriel Ebner
8279979f38
lean: build olean files
2020-11-04 16:32:56 +01:00
Ryan Mulligan
ba3fc8bf47
Merge pull request #102707 from r-ryantm/auto-update/picard-tools
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picard-tools: 2.23.4 -> 2.23.8
2020-11-04 06:11:08 -08:00
Frederik Rietdijk
10c57af49c
Merge staging-next into staging
2020-11-04 09:28:07 +01:00
R. RyanTM
6391d3c1b5
picard-tools: 2.23.4 -> 2.23.8
2020-11-04 04:53:50 +00:00
Ryan Mulligan
4ee1f7bc2c
Merge pull request #102582 from r-ryantm/auto-update/marvin
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marvin: 20.17.0 -> 20.19.0
2020-11-03 14:56:38 -08:00
Kevin Cox
d7a0daf2a1
Merge pull request #102420 from freezeboy/remove-plink
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plink: remove (broken since 2014)
2020-11-03 07:49:09 -05:00
Frederik Rietdijk
470f05cb5d
Merge staging-next into staging
2020-11-03 12:06:41 +01:00
R. RyanTM
aea6594c69
marvin: 20.17.0 -> 20.19.0
2020-11-03 04:38:29 +00:00
Mario Rodas
98bf2ceb68
Merge pull request #102464 from r-ryantm/auto-update/igv
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igv: 2.8.9 -> 2.8.11
2020-11-02 18:21:36 -05:00
Timo Kaufmann
9560149052
Merge pull request #102479 from r-ryantm/auto-update/jmol
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jmol: 14.31.3 -> 14.31.14
2020-11-02 19:31:29 +01:00
R. RyanTM
ccabae32dd
gtkwave: 3.3.106 -> 3.3.107
2020-11-02 08:26:41 -08:00
R. RyanTM
41e1c236bf
cytoscape: 3.8.1 -> 3.8.2
2020-11-02 08:20:13 -08:00
R. RyanTM
3d40283367
jmol: 14.31.3 -> 14.31.14
2020-11-02 12:07:07 +00:00
R. RyanTM
8ef46be2a4
igv: 2.8.9 -> 2.8.11
2020-11-02 10:16:32 +00:00
Pavol Rusnak
2c931312ce
treewide: simplify rev/repo arguments in src
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+ use fetchFromGithub where possible
2020-11-01 23:02:24 -08:00
freezeboy
1f7e201e9e
plink: remove (broken since 2014)
2020-11-02 03:24:16 +01:00
R. RyanTM
036cec187c
ginac: 1.7.9 -> 1.8.0
2020-11-01 17:19:05 -08:00
Frederik Rietdijk
83dde6c52c
Merge staging-next into staging
2020-11-01 10:11:12 +01:00
R. RyanTM
afa6047e12
gromacs: 2020.3 -> 2020.4
2020-11-01 00:24:33 +00:00
Vincent Laporte
8cab21b48b
Revert "coq: propagate and install ocaml and findlib"
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This reverts commit 5d0e2dedd5
2020-10-31 09:08:06 +01:00
Justin Bedo
32573f4b6e
last: 1066 -> 1133
2020-10-31 10:59:02 +11:00
Maximilian Bosch
952dc5c7ff
Merge pull request #101421 from sikmir/geogebra
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geogebra: 5-0-593-0 -> 5-0-609-0, geogebra6: 6-0-600-0 -> 6-0-609-0
2020-10-30 23:39:37 +01:00
Renato Alves
6e19ed0a52
lumpy: 0.3.0 -> 0.3.1
2020-10-30 01:28:00 +01:00
Renato Alves
a28e5b0a4f
samtools: 1.10 -> 1.11
2020-10-29 18:27:22 +01:00
Andreas Rammhold
db0fe5c3eb
Merge branch master into staging to fix eval error
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This fixes the eval error of the small (and "big"?) NixOS test set that
was fixed in 1088f05eba8f542
2020-10-28 03:03:27 +01:00
Ben Siraphob
db74029e3e
treewide: remove package names from prefix of descriptions
2020-10-27 09:15:07 -07:00
Max Hausch
8fb91897f4
pspp 1.2.0 -> 1.4.1
2020-10-27 01:10:37 +01:00
Masanori Ogino
40fb3ed6dc
maxima: remove 5.41.0
...
It had been kept for SageMath, but it uses the default version nowadays
and this version is not referenced in nixpkgs.
Signed-off-by: Masanori Ogino <167209+omasanori@users.noreply.github.com>
2020-10-27 06:09:12 +09:00
Maximilian Bosch
61fa498994
Merge pull request #101646 from luc65r/pkg/rofi-calc
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rofi-calc: 1.8 -> 1.9
2020-10-26 16:36:43 +01:00
Ryan Mulligan
4fce633319
Merge pull request #101716 from r-ryantm/auto-update/openhantek6022
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openhantek6022: 3.1.2 -> 3.1.3
2020-10-26 05:43:38 -07:00
Vladimír Čunát
336bc8283b
Re-Revert "Merge #101508 : libraw: 0.20.0 -> 0.20.2"
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This reverts commit c778945806
2020-10-26 08:19:17 +01:00
R. RyanTM
250757970b
openhantek6022: 3.1.2 -> 3.1.3
2020-10-26 00:37:51 +00:00
Peter Simons
40bc6c8dad
Merge pull request #100393 from matthiasbeyer/update-r
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R: 4.0.2 -> 4.0.3
2020-10-25 21:57:03 +01:00
Lucas Ransan
2436e41916
rofi-calc: 1.8 -> 1.9
2020-10-25 14:31:57 +01:00
Vladimír Čunát
c778945806
Revert "Merge #101508 : libraw: 0.20.0 -> 0.20.2"
...
I'm sorry; I didn't notice it contained staging commits.
This reverts commit 17f5305b6ca8a018ddc0
2020-10-25 09:41:51 +01:00
Vladimír Čunát
17f5305b6c
Merge #101508 : libraw: 0.20.0 -> 0.20.2
2020-10-25 09:28:53 +01:00
Nikolay Korotkiy
a2472ebfb1
geogebra: 5-0-593-0 -> 5-0-609-0, geogebra6: 6-0-600-0 -> 6-0-609-0
2020-10-23 19:25:11 +03:00
Vincent Laporte
2cb651ad14
cryptoverif: 2.01pl1 → 2.03pl1
2020-10-23 10:20:09 +02:00
Anderson Torres
253fb7648c
Merge pull request #101244 from zaninime/nanovna-saver
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nanovna-saver: init at 0.3.7
2020-10-22 20:42:56 -03:00
Jan Tojnar
3e01d383ee
Merge branch 'staging-next' into staging
2020-10-22 21:20:32 +02:00
Francesco Zanini
2a54c4f950
nanovna-saver: init at 0.3.7
2020-10-22 16:23:13 +02:00
