Sandro
87180d88f9
Merge pull request #140102 from r-ryantm/auto-update/MAVProxy
2021-10-03 19:20:09 +02:00
github-actions[bot]
9960091b16
Merge staging-next into staging
2021-10-02 18:01:48 +00:00
Alex Martens
5430af2013
dwfv: init at 0.4.1
2021-10-02 09:03:37 -07:00
Vladimir Korolev
72d4a1f13d
openmodelica: v1.17.0 -> v1.18.0, add balodja to openmodelica maintainers
2021-10-02 12:39:57 +03:00
Mario Rodas
4662abd3b4
R: don't restrict hydraPlatforms
...
The restriction of hydraPlatforms was added in [1: ef05fad51aef05fad51a
2021-10-01 04:20:00 +00:00
R. RyanTM
e7ad746486
mavproxy: 1.8.42 -> 1.8.43
2021-10-01 00:38:44 +00:00
github-actions[bot]
a92850904c
Merge staging-next into staging
2021-09-30 18:01:43 +00:00
Bobby Rong
8145828985
Merge pull request #134593 from r-ryantm/auto-update/star
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star: 2.7.8a -> 2.7.9a
2021-09-30 22:39:05 +08:00
github-actions[bot]
2dfffe79b2
Merge staging-next into staging
2021-09-30 00:02:24 +00:00
Austin Seipp
d474571392
symbiyosys: 2020.08.22 -> 2021.09.13
...
Signed-off-by: Austin Seipp <aseipp@pobox.com>
2021-09-29 13:14:27 -05:00
github-actions[bot]
ce4a8ae240
Merge staging-next into staging
2021-09-29 18:01:44 +00:00
Sandro
8f7fa26a78
Merge pull request #139309 from Baltoli/bump-z3
2021-09-29 15:00:38 +02:00
Thomas Tuegel
0e87e81ee5
Merge pull request #139764 from veprbl/pr/qtwrap_ismacho
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qt: use isELF and isMachO in wrapQtAppsHook
2021-09-28 20:37:15 -05:00
Timo Kaufmann
cb3342eec8
Merge pull request #139758 from collares/sage-threejs-path
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threejs-sage: install in expected location
2021-09-28 20:05:18 +02:00
Mauricio Collares
a5a7c33e77
threejs-sage: install in expected location
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Co-authored-by: Timo Kaufmann <timokau@zoho.com>
2021-09-28 19:06:48 +02:00
Dmitry Kalinkin
e0532475bc
treewide: remove darwin-only manual wrapQtApp invocations
2021-09-28 10:29:46 -04:00
Sandro
5b5fb57aed
Merge pull request #139745 from Ma27/bump-stellarium
2021-09-28 14:12:02 +02:00
Maximilian Bosch
fbdf7d2206
stellarium: 0.21.1 -> 0.21.2
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ChangeLog: https://github.com/Stellarium/stellarium/releases/tag/v0.21.2
2021-09-28 13:49:59 +02:00
Robert Schütz
54e1db2152
Merge pull request #138479 from dotlambda/proj-8.1.1
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proj: 7.2.1 -> 8.1.1
2021-09-27 16:46:32 -07:00
Robert Schütz
98c8fc6fd0
gplates: 2.2.0 -> 2.3.0
2021-09-26 23:11:29 -07:00
Ryan Burns
4e1586c6ad
Merge pull request #139338 from r-burns/protobuf
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treewide: fixes for protobuf 3.18+
2021-09-25 14:54:43 -07:00
Bruce Collie
3e213b8699
z3: 4.8.10 -> 4.8.12
2021-09-24 11:46:21 +01:00
R. RyanTM
5becb56f71
star: 2.7.8a -> 2.7.9a
2021-09-24 10:37:28 +08:00
Ryan Burns
40299257cc
Merge branch 'master' into staging-next
2021-09-23 18:43:00 -07:00
Naïm Favier
b2391a51d2
coq: add desktop file for coqide
2021-09-23 14:39:50 +02:00
Sandro
9f5d7fa703
Merge pull request #136526 from smancill/shogun-remove-svmlight
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shogun: remove non-distributable SVMlight code
2021-09-23 14:11:12 +02:00
Ryan Burns
813c400edc
cntk: fix build with protobuf 3.18+
2021-09-23 02:16:17 -07:00
Bobby Rong
c25465873c
Merge pull request #138022 from natsukium/blast/update
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blast: 2.11.0 -> 2.12.0
2021-09-23 14:48:35 +08:00
Ryan Burns
e12802213e
caffe: fix build with protobuf 3.18+
2021-09-22 21:57:13 -07:00
github-actions[bot]
796a5df129
Merge master into staging-next
2021-09-23 00:01:50 +00:00
Sandro
1d180608da
Merge pull request #138968 from hjones2199/kstars355
2021-09-22 22:32:28 +02:00
Guillaume Girol
4bc83aaffa
Merge pull request #136489 from ehmry/nimPackages
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nimpackages / buildNimPackage
2021-09-22 18:35:38 +00:00
Hunter Jones
3ba268b73d
kstars: 3.5.4 -> 3.5.5
2021-09-22 11:35:38 -05:00
markuskowa
b4f1a1338f
Merge pull request #138512 from r-burns/csdp
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[staging-next] Revert "csdp: move gfortran to nativeBuildInputs"
2021-09-20 12:18:40 +02:00
Alyssa Ross
e2bb7997c4
Merge remote-tracking branch 'nixpkgs/master' into staging-next
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Conflicts:
nixos/doc/manual/release-notes/rl-2111.section.md
2021-09-19 17:08:00 +00:00
Ryan Burns
b23afbb866
Revert "csdp: move gfortran to nativeBuildInputs"
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We are not using gfortran as a native binary; we are using its lib.
Fixes build on darwin.
This reverts commit eabbf45b60
2021-09-19 02:35:27 -07:00
Bobby Rong
0fd8cc3908
treewide: switch from pantheon.maintainers to lib.teams.pantheon
2021-09-18 23:07:00 +08:00
github-actions[bot]
263bdbdad4
Merge master into staging-next
2021-09-18 06:01:19 +00:00
figsoda
0e575a459e
Merge pull request #137974 from r-ryantm/auto-update/bowtie
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bowtie: 1.3.0 -> 1.3.1
2021-09-17 22:52:43 -04:00
Sebastián Mancilla
e810fad47a
shogun: remove non-distributable SVMlight code
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SVMlight uses a non-standard license [0] that doesn't allow distribution
without the author's permission:
> The software must not be modified and distributed without prior permission of the author.
So remove all code related to it when building the binary package.
Use upstream's own script to do it (which they use to create and
distribute their own Debian package), with a few fixes.
There is still the option of building from source with SVMlight enabled
with an override that sets the withSvmLight parameter.
If SVMlight is enabled set the license to unfree. Also fix the
deprecated gpl3 license to gpl3Plus.
[0]: https://github.com/shogun-toolbox/shogun/blob/shogun_6.1.4/doc/license/LICENSE_SVMlight.md
2021-09-17 15:04:34 -03:00
github-actions[bot]
a21275cdae
Merge master into staging-next
2021-09-17 18:01:14 +00:00
figsoda
715d551a10
Merge pull request #136637 from L-as/alliance
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alliance: 5.1.1 -> unstable-2020-12-04
2021-09-17 12:47:55 -04:00
Las Safin
33390f6bc7
alliance: 5.1.1 -> unstable-2021-09-15
2021-09-17 16:17:23 +00:00
github-actions[bot]
2ad7b248e6
Merge staging-next into staging
2021-09-17 00:02:15 +00:00
Robert Scott
c1dac4490e
Merge pull request #138061 from Stunkymonkey/switch-fetchFromGitLab
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quantum-espresso,postgresql11Packages.pg_ed25519: switch to fetchFromGitlab
2021-09-16 23:53:23 +01:00
github-actions[bot]
85bd312fb6
Merge staging-next into staging
2021-09-16 12:02:04 +00:00
markuskowa
228e15e7cb
Merge pull request #138123 from markuskowa/fix-octopus
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octopus: add CPU optimization flags
2021-09-16 13:25:47 +02:00
Markus Kowalewski
bd69f3d627
octopus: add CPU optimization flags
2021-09-16 12:53:47 +02:00
Bobby Rong
12d38c57c3
Merge pull request #134133 from Kranzes/auto-update/SPAdes
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SPAdes: 3.15.2 -> 3.15.3
2021-09-16 17:09:24 +08:00
Bobby Rong
77f92d23c7
Merge pull request #137608 from lopsided98/qgroundcontrol-update
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qgroundcontrol: 4.1.3 -> 4.1.4
2021-09-16 14:18:28 +08:00
Felix Buehler
64bac8e874
quantum-espresso: switch to fetchFromGitLab
2021-09-15 23:13:57 +02:00
github-actions[bot]
1c625bf844
Merge staging-next into staging
2021-09-15 18:01:59 +00:00
Dmitry Kalinkin
d8ed39b309
Merge pull request #135525 from veprbl/pr/open_memstream_fmemopen_darwin_fix
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Add implemetations of open_memstream/fmemopen to be used on BSDs
2021-09-15 11:49:55 -04:00
Dmitry Kalinkin
84f408f206
Merge pull request #136016 from veprbl/pr/root_6_24_04
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root: 6.24.02 -> 6.24.06
2021-09-15 11:35:07 -04:00
Tomoya Otabi
1e9bd43214
blast: 2.11.0 -> 2.12.0
2021-09-15 15:33:44 +00:00
github-actions[bot]
24a34e5706
Merge staging-next into staging
2021-09-15 12:01:34 +00:00
Michael Raskin
47eaf6727b
Merge pull request #137876 from r-ryantm/auto-update/opensmt
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opensmt: 2.1.0 -> 2.1.1
2021-09-15 09:03:33 +00:00
R. RyanTM
7bf7c9b92b
bowtie: 1.3.0 -> 1.3.1
2021-09-15 07:35:44 +00:00
github-actions[bot]
636ebe3a72
Merge staging-next into staging
2021-09-15 06:01:54 +00:00
Justin Bedő
9c4f65db4b
Merge pull request #137884 from r-ryantm/auto-update/picard-tools
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picard-tools: 2.26.0 -> 2.26.2
2021-09-15 04:59:06 +00:00
R. RyanTM
e676fdcb90
picard-tools: 2.26.0 -> 2.26.2
2021-09-14 19:53:25 +00:00
R. RyanTM
1c9cbe8a05
opensmt: 2.1.0 -> 2.1.1
2021-09-14 18:44:37 +00:00
github-actions[bot]
95f24a8a57
Merge staging-next into staging
2021-09-14 18:01:40 +00:00
R. RyanTM
504529d628
horizon-eda: 2.0.0 -> 2.1.0
2021-09-14 10:46:32 +00:00
github-actions[bot]
04e48fbe4f
Merge staging-next into staging
2021-09-13 18:01:51 +00:00
adisbladis
fcf5397793
Merge pull request #135905 from dukc/secondDmd2097
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D compiler update
2021-09-13 11:36:55 -05:00
Ben Wolsieffer
03111112cc
qgroundcontrol: 4.1.3 -> 4.1.4
2021-09-13 00:11:37 -04:00
github-actions[bot]
dfd1161f35
Merge staging-next into staging
2021-09-13 00:02:22 +00:00
Sandro
11e504567d
Merge pull request #137454 from r-ryantm/auto-update/MAVProxy
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mavproxy: 1.8.41 -> 1.8.42
2021-09-13 00:26:51 +02:00
github-actions[bot]
fef6f602e6
Merge staging-next into staging
2021-09-12 18:01:50 +00:00
Daniël de Kok
6f2ce2a65e
treewide: remove danieldk as maintainer from a set of packages
...
I currently do not have much time to work on nixpkgs. Remove
myself as a maintainer from a bunch of packages to avoid that
people are waiting on me for a review.
2021-09-12 14:42:12 +00:00
Sandro
83eef43893
Merge pull request #135906 from yl3dy/xoscope
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xoscope: 2.0 -> 2.3
2021-09-12 16:15:41 +02:00
Sandro Jäckel
e4a49641ae
openems: fix eval
2021-09-12 14:45:44 +02:00
R. RyanTM
2464f7ae0a
mavproxy: 1.8.41 -> 1.8.42
2021-09-12 00:36:50 +00:00
github-actions[bot]
d370d9ee99
Merge staging-next into staging
2021-09-11 18:01:51 +00:00
Sandro
22d08e62d9
Merge pull request #137382 from Xitian9/geogebra
2021-09-11 18:33:09 +02:00
Sandro
790559422e
Merge pull request #136823 from r-ryantm/auto-update/MAVProxy
2021-09-11 18:08:34 +02:00
Sandro
205c2ada66
Merge pull request #136967 from bzizou/obitools
2021-09-11 16:27:18 +02:00
Stephen Morgan
28b5133cce
geogebra: 5-0-644-0 -> 5-0-662-0
2021-09-11 23:49:13 +10:00
github-actions[bot]
6188f2aeeb
Merge staging-next into staging
2021-09-11 06:01:28 +00:00
Guillaume Girol
1065a41d8d
Merge pull request #136369 from veprbl/pr/root5_gcc10_fix
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root5: fix for gcc10
2021-09-10 19:54:29 +00:00
Hunter Jones
bc19f8dd1e
kstars: 3.5.3 -> 3.5.4
2021-09-07 13:04:31 -05:00
Bruno Bzeznik
3bd1b0ed0d
obitools3: 3.0.0-beta14 -> 3.0.1b11
2021-09-07 09:38:41 +02:00
R. RyanTM
a7277dd058
mavproxy: 1.8.40 -> 1.8.41
2021-09-06 00:37:54 +00:00
Emery Hemingway
323c503cba
mosdepth: convert to buildNimPackage
2021-09-05 11:20:02 +02:00
Dmitry Kalinkin
0ec2acf51f
root: build with -Dimt=ON
2021-09-03 12:41:16 -04:00
Dmitry Kalinkin
95b2d74bc5
root: re-enable unvendored LLVM
2021-09-03 12:41:16 -04:00
Dmitry Kalinkin
aedfb59c87
root: 6.24.02 -> 6.24.06
2021-09-03 12:41:04 -04:00
Markus Kowalewski
25ebbde3e1
sherpa: move gfortran to nativeBuildInputs
2021-09-03 13:33:32 +02:00
Markus Kowalewski
01ba299e53
elmerfem: move gfortran to nativeBuildInputs
2021-09-03 13:33:32 +02:00
Markus Kowalewski
9259691d58
dl-poly-classic: move gfortran to nativeBuildInputs
2021-09-03 13:33:32 +02:00
Markus Kowalewski
35a17a0cfe
scilab: move gfortran to nativeBuildInputs
2021-09-03 13:33:32 +02:00
Markus Kowalewski
74443bc786
jags: move gfortran to nativeBuildInputs
2021-09-03 13:33:31 +02:00
Markus Kowalewski
eabbf45b60
csdp: move gfortran to nativeBuildInputs
2021-09-03 13:33:31 +02:00
Markus Kowalewski
d5c38a0d5c
siesta: move gfortran to nativeBuildInputs
2021-09-03 13:33:31 +02:00
Markus Kowalewski
9eb814fd96
quantum-espresso: move gfortran to nativeBuildInputs
2021-09-03 13:33:31 +02:00
Markus Kowalewski
eecadd3f3b
openmolcas: move gfortran to nativeBuildInputs
2021-09-03 13:33:31 +02:00
Dmitry Kalinkin
0a312a356c
root5: fix for gcc10
2021-09-01 07:14:56 -04:00
Ate Eskola
b2a39efa57
sambamba 0.8.0 -> 0.8.1
2021-08-31 12:37:49 +03:00
Michael Raskin
df3f3ccc6d
Merge pull request #136250 from collares/sage-networkx
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sage: adapt tests for networkx 2.6
2021-08-31 07:52:29 +00:00
Mauricio Collares
7194273c77
sage: adapt tests for networkx 2.6
2021-08-30 22:43:24 -03:00
schotts-fired
9ec4fb0cd1
R: add memory profiling compile option
2021-08-30 18:24:42 +02:00
davidak
fe2d3b56e7
Merge pull request #136014 from veprbl/pr/snakemake_6_7_0
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snakemake: 6.6.1 -> 6.7.0
2021-08-29 10:54:01 +02:00
Dmitry Kalinkin
b8c5c06aab
snakemake: 6.6.1 -> 6.7.0
2021-08-28 02:18:38 -04:00
Diep Pham
ac0b44b1ee
dcmtk: support darwin platform ( #136005 )
2021-08-28 02:00:18 -04:00
Alexander Kiselyov
accd81c1b6
xoscope: fixed buildInputs
2021-08-27 17:49:54 +03:00
Alexander Kiselyov
27dcb4bd31
xoscope: 2.0 -> 2.3
2021-08-26 22:21:17 +03:00
davidak
1b78608c69
Merge pull request #135516 from bzizou/stacks
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stacks: Changed license to gpl3Plus
2021-08-26 03:50:48 +02:00
Justin Bedo
b1b57ec04e
fastp: 0.20.1 -> 0.22.0
2021-08-25 09:52:07 +10:00
Sandro
73ad08e512
Merge pull request #135481 from kzvi/lean-update
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lean: 3.31.0 -> 3.32.1
2021-08-25 00:43:28 +02:00
Dmitry Kalinkin
9c8f6efc55
xfitter: enable WITH_YAML support on darwin
2021-08-24 18:21:41 -04:00
Ryan Mulligan
8c2e2ffe95
Merge pull request #135212 from r-ryantm/auto-update/stacks
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stacks: 2.55 -> 2.59
2021-08-24 09:03:17 -07:00
Bruno Bzeznik
a240cd9f4f
stacks: Changed license to gpl3Plus
2021-08-24 09:47:24 +02:00
Ryan Mulligan
997f4452a4
Merge pull request #135255 from r-ryantm/auto-update/picard-tools
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picard-tools: 2.25.7 -> 2.26.0
2021-08-23 20:56:38 -07:00
kzvi
befe89f3d7
lean: 3.31.0 -> 3.32.1
2021-08-23 15:43:00 -07:00
davidak
d18866b1c2
nasc: 0.7.5 -> 0.8.0
2021-08-23 23:23:52 +02:00
Artturi
f2f1718aae
Merge pull request #135404 from r-ryantm/auto-update/workcraft
2021-08-23 17:28:09 +03:00
Artturi
55fdaafe15
Merge pull request #135398 from r-ryantm/auto-update/verifast
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verifast: 19.12 -> 21.04
2021-08-23 17:25:35 +03:00
R. RyanTM
6b086631c6
workcraft: 3.3.2 -> 3.3.5
2021-08-23 08:01:40 +00:00
R. RyanTM
a73fc504b7
verifast: 19.12 -> 21.04
2021-08-23 07:29:27 +00:00
Sandro
00f31216e0
Merge pull request #130396 from collares/sage-9.4
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sage: 9.3 -> 9.4
2021-08-22 21:26:12 +02:00
Sandro
607fea187f
Merge pull request #135262 from shnarazk/cadical-141
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cadical: 1.3.0 -> 1.4.1
2021-08-22 20:01:59 +02:00
Sandro
354afc6ecd
Merge pull request #135285 from Mic92/fix-homepages
2021-08-22 18:30:31 +02:00
Bjørn Forsman
7f6cb5a226
eagle: put the desktop icon where it can be found
...
Apparently $out/share/icons/ doesn't work anymore, but
$out/share/pixmaps/ do.
2021-08-22 17:12:24 +02:00
Jörg Thalheim
11e5c3ac4b
bowtie: fix homepage
2021-08-22 16:08:28 +02:00
Mauricio Collares
46c3703ec1
sage: 9.3 -> 9.4
2021-08-22 09:53:12 -03:00
Mauricio Collares
9be264795c
pynac: import segfault fix
2021-08-22 09:53:12 -03:00
Mauricio Collares
b565d30c47
maxima: 5.44.0 -> 5.45.0
2021-08-22 09:53:08 -03:00
Narazaki, Shuji
960ddb6f8f
cadical: 1.3.0 -> 1.4.1
2021-08-22 20:46:34 +09:00
R. RyanTM
742cd80071
picard-tools: 2.25.7 -> 2.26.0
2021-08-22 10:47:38 +00:00
Michael Raskin
fbfc876625
Merge pull request #135241 from r-ryantm/auto-update/opensmt
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opensmt: 2.0.1 -> 2.1.0
2021-08-22 10:03:57 +00:00
R. RyanTM
3760bcfd58
opensmt: 2.0.1 -> 2.1.0
2021-08-22 09:30:15 +00:00
R. RyanTM
67c1256ddd
stacks: 2.55 -> 2.59
2021-08-22 07:08:39 +00:00
R. RyanTM
0fb51f3bf1
emuflight-configurator: 0.3.6 -> 0.4.0
2021-08-21 22:59:43 +00:00
Sandro
b2573f352e
Merge pull request #134578 from smancill/phase-hooks-use-strings
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treewide: ensure pre/post phase hooks are strings
2021-08-21 14:49:30 +02:00
Sandro Jäckel
026fb18487
ginac: switch to pname + version, cleanup
2021-08-21 11:20:15 +02:00
Sebastián Mancilla
8f94a33b38
treewide: ensure pre/post phase hooks are strings
...
Some derivations use lib.optional or lib.optionals when setting pre/post
phase hooks. Ensure the proper lib.optionalString is used.
2021-08-20 19:08:42 -04:00
Sandro
a9f66e941d
Merge pull request #134390 from smancill/colpack-darwin
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colpack: refactor builder and build on darwin
2021-08-20 23:58:11 +02:00
Tom Repetti
1387ce732d
openroad: init at 2.0
2021-08-20 10:16:03 -04:00
Sebastián Mancilla
50062cc371
colpack: refactor builder and build on darwin
...
- Use autoreconfHook and set flags with configureFlags.
- Only enable OpenMP on Linux, so it can be built on Darwin.
- Do not install .la file. Other distros also remove them.
- Do not build examples.
- Install example sources into a proper location.
- Fixed license.
2021-08-19 15:51:23 -04:00
Sandro
ac9f41a782
Merge pull request #134393 from smancill/bump-lp-solve
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lp_solve: 5.5.2.5 -> 5.5.2.11
2021-08-19 21:36:59 +02:00
Sandro
33a0810405
Merge pull request #134720 from cab404/pymole-2.5.0
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pymol: 2.3.0 -> 2.5.0
2021-08-19 19:51:09 +02:00
Zhenya Vinogradov
6714723bfa
sage: fix icon location in the kernel definition
...
The icon location is incorrect, `doc` directory exists inside `src`
directory, but not on the top level.
2021-08-19 12:20:35 +03:00
Vladimir Serov
8992ae0cff
pymol: 2.3.0 -> 2.5.0
2021-08-19 10:16:38 +03:00
davidak
f2b906617d
Merge pull request #134361 from Stunkymonkey/why3-phases
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why3: deprecate phases
2021-08-19 04:06:56 +02:00
Sebastián Mancilla
514c8569aa
lp_solve: 5.5.2.5 -> 5.5.2.11
...
- Use the generic builder and override build and install phases instead
of using buildCommand and missing phases and hooks, like fixup.
- Fix build on Darwin by using the proper build script (ccc.osx).
- Add cctools to build inputs because ccc.osx uses the libtool
command.
- The install_name of the library is not set so fix it with
fixDarwinDylibNames.
- Install headers into the expected location $out/include/lpsolve
instead of $out/include. This follows what other distro do.
2021-08-17 23:20:47 -04:00
Ryan Mulligan
ad59a67ec0
Merge pull request #134444 from r-ryantm/auto-update/picard-tools
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picard-tools: 2.25.1 -> 2.25.7
2021-08-17 16:47:31 -07:00
Artturi
8ba3c63144
Merge pull request #133998 from r-ryantm/auto-update/wxmaxima
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wxmaxima: 21.02.0 -> 21.05.2
2021-08-17 23:00:21 +03:00
Gabriel Ebner
65cafb6030
Merge pull request #134474 from r-ryantm/auto-update/qalculate-gtk
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qalculate-gtk: 3.19.0 -> 3.20.1
2021-08-17 21:32:08 +02:00
Artturi
4f36420d07
Merge pull request #134045 from r-ryantm/auto-update/minimap2
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minimap2: 2.17 -> 2.22
2021-08-17 22:22:47 +03:00
Ryan Mulligan
6cae9fd0c5
Merge pull request #134472 from r-ryantm/auto-update/vowpal-wabbit
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vowpal-wabbit: 8.10.0 -> 8.11.0
2021-08-17 11:18:02 -07:00
R. RyanTM
73b3e147ea
openhantek6022: 3.2.3 -> 3.2.4
2021-08-17 10:33:56 -07:00
R. RyanTM
cbd7e0dec1
qalculate-gtk: 3.19.0 -> 3.20.1
2021-08-17 16:04:54 +00:00
R. RyanTM
6d139ed34f
vowpal-wabbit: 8.10.0 -> 8.11.0
2021-08-17 15:59:33 +00:00
R. RyanTM
1a23a8bb9e
picard-tools: 2.25.1 -> 2.25.7
2021-08-17 13:50:42 +00:00
Gabriel Ebner
f267d39257
Merge pull request #134394 from r-ryantm/auto-update/elan
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elan: 1.0.6 -> 1.0.7
2021-08-17 10:03:05 +02:00
R. RyanTM
b1868a8296
elan: 1.0.6 -> 1.0.7
2021-08-17 03:53:13 +00:00
Felix Buehler
c849ada0c5
why3: deprecate phases
2021-08-16 22:50:19 +02:00
Felix Buehler
8a8a949ffd
tlaplusToolbox: deprecate phases
2021-08-16 21:54:44 +02:00
Felix Buehler
8ad1a7859a
tlaps: deprecate phases
2021-08-16 21:54:22 +02:00
Ilan Joselevich
9f5b3fafa0
SPAdes: 3.15.2 -> 3.15.3
2021-08-15 11:12:42 +03:00
R. RyanTM
5caebbb040
verilator: 4.202 -> 4.210
2021-08-14 17:01:17 -05:00
R. RyanTM
5693a554e2
minimap2: 2.17 -> 2.22
2021-08-14 15:55:35 +00:00
R. RyanTM
0ba50b681e
wxmaxima: 21.02.0 -> 21.05.2
2021-08-14 11:51:36 +00:00
Michael Raskin
1350415b52
Merge pull request #127798 from PhDyellow/r_bump_version
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R: 4.0.4 -> 4.1.0
2021-08-13 13:41:07 +00:00
Phil Dyer
a21caa7f19
Remove unused fetchpatch from inputs
2021-08-13 10:19:31 +10:00
Phil Dyer
7f07184a8e
Add Patch for aarch64
2021-08-13 10:16:59 +10:00
Sandro
7d75a19c60
Merge pull request #131463 from angustrau/logisim-evolution
2021-08-12 12:22:42 +02:00
Artturi
8ebdf7ec6b
Merge pull request #133322 from r-ryantm/auto-update/ginac
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ginac: 1.8.0 -> 1.8.1
2021-08-11 23:01:14 +03:00
Phil Dyer
d37edcd3d5
R: 4.1.0 -> 4.1.1
2021-08-11 16:41:53 +10:00
R. RyanTM
e36200fc36
ginac: 1.8.0 -> 1.8.1
2021-08-10 07:09:09 +00:00
Artturi
5a587da43c
Merge pull request #133187 from Stunkymonkey/plm-fix
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plm: fix old link & deprecate phases
2021-08-10 04:39:14 +03:00
Artturi
ae50676a71
Merge pull request #133235 from r-ryantm/auto-update/jmol
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jmol: 14.31.46 -> 14.31.49
2021-08-10 03:36:07 +03:00
R. RyanTM
72a522e795
jmol: 14.31.46 -> 14.31.49
2021-08-09 07:27:37 +00:00
R. RyanTM
323134240a
gama: 2.12 -> 2.14
2021-08-09 00:26:53 +00:00
Felix Buehler
d62ab96698
plm: fix old link & deprecate phases
2021-08-08 23:53:53 +02:00
Dmitry Kalinkin
e51edc1e64
Merge pull request #130903 from veprbl/pr/cwltool
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cwltool: init at 3.1.20210628163208
2021-08-08 11:15:33 -04:00
Sandro
93ead26f57
Merge pull request #130359 from sheepforce/avogadro2
2021-08-08 13:07:33 +02:00
Sandro
fd26f351b5
Merge pull request #131493 from collares/polymake-4.4
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polymake: 3.2.rc4 -> 4.4
2021-08-08 12:30:59 +02:00
Jörg Thalheim
5ec2eafb18
Merge pull request #125133 from sophrosyne97/fix_vhd2vl
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vhd2vl: fix build error
2021-08-08 11:12:45 +01:00
Sandro
bfd533061e
Merge pull request #132881 from r-ryantm/auto-update/lepton-eda
2021-08-07 12:11:38 +02:00
Artturi
e69c8ea78e
Merge pull request #111691 from jbedo/bowtie2
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bowtie2: resolve missing runtime dependencies
2021-08-07 04:03:47 +03:00
R. RyanTM
d06fec649b
lepton-eda: 1.9.13-20201211 -> 1.9.16-20210731
2021-08-06 09:59:50 +00:00
Sandro
cfdee1710c
Merge pull request #109552 from tesq0/merge-request-lepton-eda
2021-08-05 15:35:14 +02:00
Mikolaj Galkowski
629e1d384d
lepton-eda: init at 1.9.13-20201211
2021-08-05 14:18:10 +02:00
Markus Kowalewski
d26039d43b
openmolcas: 21.02 -> 21.06
2021-08-05 13:18:28 +02:00
Sandro
04b5e62d8d
Merge pull request #132468 from Stunkymonkey/applications-phases1
2021-08-05 09:37:57 +02:00
Markus Kowalewski
7d3b20253f
ergoscf: init at 3.8
2021-08-04 00:29:52 +02:00
Stig
c464dc811b
Merge pull request #132237 from Artturin/perlmagikupdate
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perlPackages.ImageMagick: 7.0.10 -> 7.0.11
2021-08-03 00:16:14 +02:00
Felix Buehler
be219752d2
picard-tools: deprecate phases
2021-08-03 00:04:29 +02:00
Felix Buehler
4b883542fe
varscan: deprecate phases
2021-08-03 00:04:16 +02:00
Felix Buehler
e3dd43360e
eagle7: deprecate phases
2021-08-03 00:03:58 +02:00
Felix Buehler
f67a0a37f0
saw-tools: remove phases
2021-08-03 00:03:41 +02:00
Felix Buehler
7b20eb9e37
scilab-bin: remove phases
2021-08-03 00:03:12 +02:00
Felix Buehler
44cb64dba6
quantomatic: deprecate phases
2021-08-03 00:02:58 +02:00
Artturin
f173c77476
perlPackages.ImageMagick: rename from perlPackages.PerlMagick
2021-08-02 20:05:00 +03:00
Ben Wolsieffer
e8b00e9eeb
mavproxy: 1.8.39 -> 1.8.40
2021-07-31 18:40:30 -04:00
Ben Siraphob
2f94991628
treewide: fix redirected URLs
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Using the script in maintainers/scripts/update-redirected-urls.sh
2021-08-01 00:01:50 +07:00
Ben Siraphob
72d0a639ce
Merge pull request #131755 from r-ryantm/auto-update/libpoly
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libpoly: 0.1.9 -> 0.1.10
2021-07-31 15:49:23 +07:00
Sandro
1524f36b3e
Merge pull request #131627 from jbedo/mosdepth
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mosdepth: 0.3.1 -> 0.3.2
2021-07-29 13:56:24 +00:00
Frederik Rietdijk
8dcfe523f7
Merge pull request #131719 from FRidh/python2-to-3
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Python: further migrate packages from 2 to 3
2021-07-29 10:49:00 +02:00
R. RyanTM
1d4ae0cfb7
libpoly: 0.1.9 -> 0.1.10
2021-07-28 00:31:53 +00:00
Frederik Rietdijk
8f6b07c223
maxima: use strictDeps and python3
2021-07-27 20:37:06 +02:00
github-actions[bot]
db6a26db02
Merge master into staging-next
2021-07-27 18:01:01 +00:00
Phillip Seeber
9504a98c32
avogadro2: init at 1.94.0
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avogadro2: code-review suggestions
avogadro2: review comments
2021-07-27 18:43:15 +02:00
Sandro Jäckel
cebfbdff37
mrbayes: 3.2.7 -> 3.2.7a
2021-07-27 14:30:23 +02:00
github-actions[bot]
2692c2e427
Merge master into staging-next
2021-07-27 12:01:20 +00:00
Sandro
28d58fb25f
Merge pull request #131531 from SuperSandro2000/mrbayes
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mrbayes: modernize
2021-07-27 10:57:14 +00:00
Sandro Jäckel
108ad942fb
mrbayes: modernize
2021-07-27 11:53:51 +02:00
Phil Dyer
9a88197fe7
R: 4.0.4 -> 4.1.0
...
Co-authored-by: Mauricio Collares <244239+collares@users.noreply.github.com>
2021-07-27 12:32:00 +10:00
github-actions[bot]
737604e550
Merge master into staging-next
2021-07-27 00:01:35 +00:00
Justin Bedo
d885373469
mosdepth: 0.3.1 -> 0.3.2
2021-07-27 09:52:22 +10:00
Guillaume Girol
455712841c
Merge pull request #130663 from symphorien/bitwuzla
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bitwuzla: init at unstable-2021-07-01
2021-07-26 19:45:46 +00:00
Frederik Rietdijk
62370fb59a
Merge remote-tracking branch 'upstream/master' into staging-next
2021-07-26 09:19:44 +02:00
Ryan Mulligan
cec4b2a274
Merge pull request #131319 from r-ryantm/auto-update/jmol
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jmol: 14.31.44 -> 14.31.46
2021-07-25 19:41:51 -07:00
Mauricio Collares
045d6f35d9
polymake: 3.2.rc4 -> 4.4
2021-07-25 20:12:21 -03:00
Angus Trau
351b7d24e2
logisim: create desktop entry ( #131450 )
2021-07-25 17:46:34 -04:00
Guillaume Girol
1894e8d945
bitwuzla: init at unstable-2021-07-01
2021-07-25 15:52:25 +02:00
Angus Trau
92cced04c6
logisim-evolution: init at 3.5.0
2021-07-25 19:52:24 +10:00
github-actions[bot]
6a5e4f2c3d
Merge master into staging-next
2021-07-25 06:01:27 +00:00
Ben Siraphob
0f34985134
Merge pull request #122828 from balodja/openmodelica
2021-07-25 09:24:25 +07:00
github-actions[bot]
a37fbac53b
Merge master into staging-next
2021-07-25 00:01:35 +00:00
Sandro
224159802c
Merge pull request #131152 from r-ryantm/auto-update/bedops
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bedops: 2.4.39 -> 2.4.40
2021-07-24 22:53:05 +00:00
github-actions[bot]
859acbc1bc
Merge master into staging-next
2021-07-24 18:01:04 +00:00
Vladimir Korolev
5c8561f11a
openmodelica: 1.9.3 -> 1.17.0 with lots of changes
...
Co-authored-by: Jaakko Luttinen <jaakko.luttinen@iki.fi>
Most of changes are:
* separate packages for different openmodelica components,
* qt4 -> qt5,
* patches to instruct the OMEdit wrapper with stdenv executables
location,
* adoption of #89731 and #109595 ,
* openblas -> blas, lapack according to #83888 ,
* parallel building,
* getting rid of spurious build phases,
* correct the license,
* cross-compilation,
* forcing compiler to clang++ according to OM build recommendations,
* drop of pangox_compat according to #75909 and #76412 ,
* better dependencies, and more.
2021-07-24 20:29:26 +03:00
Daniël de Kok
8cb9eabf96
Merge pull request #131177 from r-ryantm/auto-update/finalfusion-utils
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finalfusion-utils: 0.12.0 -> 0.13.0
2021-07-24 14:47:49 +02:00
R. RyanTM
4e5b3b49e4
jmol: 14.31.44 -> 14.31.46
2021-07-24 09:22:42 +00:00
Guillaume Girol
0708fe494b
cadical: install library
2021-07-23 21:19:27 +02:00
github-actions[bot]
cb1426e30a
Merge staging-next into staging
2021-07-23 18:01:46 +00:00
arjix
ebabecfd2a
nengo-gui: init at 0.4.8 ( #130015 )
...
Co-authored-by: Sandro <sandro.jaeckel@gmail.com>
2021-07-23 14:06:09 +02:00
R. RyanTM
934002f7a4
finalfusion-utils: 0.12.0 -> 0.13.0
2021-07-23 06:08:46 +00:00
R. RyanTM
d943e6aa12
bedops: 2.4.39 -> 2.4.40
2021-07-23 01:02:40 +00:00
github-actions[bot]
2e00ed4420
Merge staging-next into staging
2021-07-22 06:01:44 +00:00
Ben Siraphob
a5049e8caa
Merge pull request #130971 from siraben/parallel-coq
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coq: enable parallel building
2021-07-22 10:00:42 +07:00
Dmitry Kalinkin
3f24366cda
cwltool: init at 3.1.20210628163208
2021-07-21 22:11:17 -04:00
Sandro
d06f7e07a6
Merge pull request #130925 from SuperSandro2000/python-aliases
2021-07-22 03:21:11 +02:00
Ben Siraphob
7c1d4d8255
coq: enable parallel building
2021-07-22 02:04:47 +07:00
github-actions[bot]
7a1e77336a
Merge staging-next into staging
2021-07-21 18:01:41 +00:00
Sandro Jäckel
b4099137b1
pythonPackages: deprecate ConfigArgParse alias
2021-07-21 13:32:54 +02:00
Sandro
aee461ddb4
toil: update homepage
2021-07-21 13:28:37 +02:00
Dmitry Kalinkin
866fe59150
toil: init at 5.4.0
2021-07-20 22:18:08 -04:00
github-actions[bot]
23c6d36ba0
Merge staging-next into staging
2021-07-20 18:01:42 +00:00
Sandro
8472d44b82
Merge pull request #130812 from SuperSandro2000/SuperSandro2000-patch-4
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logisim: cleanup
2021-07-20 19:48:37 +02:00
Sandro
fd1ab319b7
logisim: cleanup
2021-07-20 18:33:48 +02:00
Sandro
c401885fe1
Merge pull request #130192 from Stunkymonkey/logisim-phases
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logisim: deprecate phases
2021-07-20 18:32:40 +02:00
github-actions[bot]
0e13cd9f49
Merge staging-next into staging
2021-07-20 12:02:50 +00:00
Sandro
4a340627aa
Merge pull request #130661 from veprbl/pr/snakemake_6_6_1
2021-07-20 11:05:53 +02:00
Ben Siraphob
e8599765f5
Merge pull request #130638 from siraben/par-treewide
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treewide: remove unnecessary enableParallelBuilding when using cmake, meson, qmake
2021-07-20 12:10:21 +07:00
Ben Siraphob
4ce8c34049
treewide: remove unnecessary enableParallelBuilding when using qmake
2021-07-20 10:32:58 +07:00
github-actions[bot]
e86ff5c2b2
Merge staging-next into staging
2021-07-20 00:02:21 +00:00
