JakeHillion/nixpkgs
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28639 Commits

Author SHA1 Message Date
Jeffrey David Johnson
2f6581df00 r-modules: mark mzR broken 2016-04-12 14:16:43 -07:00
Jeffrey David Johnson
2ceec79ad5 work on fixing up bioconductor packages 2016-03-31 16:16:34 -07:00
Jeffrey David Johnson
3c0fb5ede1 work on fixing up bioconductor packages 2016-03-31 11:36:39 -07:00
Jeffrey David Johnson
c9934bbcb8 work on fixing up bioconductor packages 2016-03-31 11:17:21 -07:00
Jeffrey David Johnson
518fd135ed work on fixing up bioconductor packages 2016-03-27 23:14:24 -07:00
Jeffrey David Johnson
e98a231af8 work on fixing up bioconductor packages 2016-03-26 11:26:29 -07:00
Jeffrey David Johnson
05fc143451 work on fixing up bioconductor packages 2016-03-25 09:15:02 -07:00
Jeffrey David Johnson
1911d4925e work on fixing up bioconductor package 2016-03-25 00:30:20 -07:00
Jeffrey David Johnson
4cd2202918 work on fixing up bioconductor packages 2016-03-24 14:51:21 -07:00
Jeffrey David Johnson
66bcbfb93d r-modules: update CRAN, add Bioconductor data pkgs 2016-03-22 22:50:54 -07:00
Daniel Peebles
6f5a71dec8 Merge pull request #14134 from ryanartecona/gobjectIntrospection/fix-darwin 
gobjectIntrospection: fix darwin build
 2016-03-22 21:51:10 -04:00
Ryan Artecona
bb63c6a4c4 gobjectIntrospection: fix darwin build 
Stop using obsolete `otool` package, preferring `cctools` (which
includes otool), on darwin.

Remove autoconf & automake from reqs, as they were unused.

Fixes #12670
 2016-03-22 21:40:15 -04:00
Charles Strahan
0547fd247f go-1.6: fix the build 
One of the test scripts dynamically creates and executes a bash script,
which attempts to use `/usr/bin/env bash`. This patches the file to
use the stdenv's shell instead.

Otherwise, the only way this could have worked was by building go_1_6
outside of the sandbox.
 2016-03-22 21:39:45 -04:00
Shea Levy
49e53e6701 nix-exec: bump for new nix 2016-03-22 18:20:16 -04:00
Domen Kožar
ba78130c21 remove elrangR15 and riak 1.3.0 as they're outdated 
(cherry picked from commit 4452a68425e4eaf9db95e0fc5ac8474a2b19bc71)
Signed-off-by: Domen Kožar <domen@dev.si>
 2016-03-22 21:40:07 +00:00
Domen Kožar
b7f50b493c flow: 0.18.1 -> 0.22.1 
(cherry picked from commit 15761b0520383a816d250b4301982e9d088be14b)
Signed-off-by: Domen Kožar <domen@dev.si>
 2016-03-22 21:22:15 +00:00
zimbatm
b6c5879549 Merge pull request #14102 from manveru/capybara-webkit 
capybara-webkit: gem needs qt5Full
 2016-03-22 20:42:47 +00:00
Eelco Dolstra
5759b447dc opensubdiv: 3.0.3 -> 3.0.4 2016-03-22 21:33:54 +01:00
Domen Kožar
0aee790c21 Merge pull request #14122 from frewsxcv/patch-1 
Fetch setuptools from PyPi via HTTPS.
 2016-03-22 20:15:39 +00:00
Nikolay Amiantov
ad1f158111 Merge pull request #14088 from jgillich/rust-head 
Rust updates
 2016-03-23 00:10:07 +04:00
Corey Farwell
beabbc228c Fetch setuptools from PyPi via HTTPS. 2016-03-22 15:10:08 -04:00
Jakob Gillich
02b20eecc2 rustfmt: 2016-02-15 -> 2016-03-22 2016-03-22 17:33:06 +01:00
joachifm
4f0324f766 Merge pull request #14116 from otwieracz/utox 
utox: 0.5.0 -> 0.7.0, libtoxcore: 20160131 -> 20160319
 2016-03-22 13:01:43 +00:00
Jakob Gillich
a9326f6f34 cargoMaster: 2016-02-25 -> 2016-03-22 2016-03-22 13:16:56 +01:00
Jakob Gillich
3e2495be57 rustcMaster: 2016-02-25 -> 2016-03-22 2016-03-22 13:16:56 +01:00
Slawomir Gonet
eddb7a55f8 utox: 0.5.0 -> 0.7.0, libtoxcore: 20160131 -> 20160319 2016-03-22 08:42:07 +01:00
Franz Pletz
b2f92582fb uhd: 3.7.0 -> 3.9.3 2016-03-22 01:18:01 +01:00
Tobias Geerinckx-Rice
c0a35241f0 mcelog: 133 -> 134 
trigger: Avoid warning from earlier merge
 2016-03-22 00:59:15 +01:00
Franz Pletz
1a9b272c09 nss: 3.22.2 -> 3.23 (security) 
Fixes CVE-2016-1950.

See: https://developer.mozilla.org/en-US/docs/Mozilla/Projects/NSS/NSS_3.23_release_notes
 2016-03-21 21:27:59 +01:00
Peter Simons
9405b1f497 hackage-packages.nix: update Haskell package set 
This update was generated by hackage2nix v20160308-3-g8057d11 using the following inputs:

  - Nixpkgs: cc6b62965c
  - Hackage: 8103415143
  - LTS Haskell: 6bcb171af7
  - Stackage Nightly: 26f7d11e37
 2016-03-21 13:18:57 +01:00
Peter Simons
ca34db0409 configuration-hackage2nix.yaml: update list of broken packages 2016-03-21 13:18:56 +01:00
Peter Simons
bd2bc77f8c haskell-transformers-compat: fix build with GHC 8.0.x 2016-03-21 13:17:54 +01:00
Michael Fellinger
4873838f75 capybara-webkit: gem needs qt5Full 2016-03-21 12:01:37 +01:00
Vladimír Čunát
1d11940aac Merge #14005: libav improvements 
It includes more than the PR itself.
 2016-03-21 09:59:18 +01:00
Vladimír Čunát
07a3d42023 libav: minor updates 11.4 -> 11.6 
The older branches seem unmaintained and better not used -
/cc maintainer of keyfinder @nckx.
 2016-03-21 09:57:09 +01:00
Vladimír Čunát
02b13f7bdb libav: fixup sandboxed builds after parent commit 2016-03-21 09:56:25 +01:00
Ryan Artecona
1662881740 libav: support Darwin & install docs/manpages 
Close #14005.
 2016-03-21 09:44:42 +01:00
Ryan Artecona
f3f8da4a5f libav: support Darwin & install docs/manpages 2016-03-20 17:42:34 -04:00
Marius Bakke
54f6695928 libykneomgr: 0.1.7 -> 0.1.8 2016-03-20 18:39:30 +00:00
zimbatm
7850525e2c Merge pull request #14003 from cstrahan/go-ide-packages 
goPackages: add ide-like packages
 2016-03-20 00:16:25 +00:00
Lluís Batlle i Rossell
9b8b143c99 Missing path in prev commit 2016-03-20 00:47:12 +01:00
Lluís Batlle i Rossell
e6e7de082d Fixing icu for ARM with a patch from openembedded. 
It failed with an "internal error".
 2016-03-20 00:42:12 +01:00
zimbatm
5a64bc44ea move all ruby modules to development/ruby-modules 2016-03-19 22:06:26 +00:00
zimbatm
3547ffa89f ruby: remove unused patches 2016-03-19 22:04:12 +00:00
zimbatm
eccad06e23 remove unsed ruby-sqlite3 package 2016-03-19 22:04:12 +00:00
zimbatm
06e4186f4e Merge pull request #14061 from zimbatm/bundler-env-fix 
bundlerEnv: fix wrapping of programs
 2016-03-19 22:03:12 +00:00
Peter Simons
2a0b0dbdf2 Merge pull request #13932 from anderspapitto/distcc 
distcc: 3.1 -> 2016-02-16
 2016-03-19 22:57:36 +01:00
Anders Papitto
ac85f1ab4b distcc: 3.1 -> 2016-02-16 
3.1 is from 2008
 2016-03-19 14:55:56 -07:00
zimbatm
53c9edef34 bundlerEnv: fix wrapping of programs 
Setting the GEM_PATH after ruby is started is not reliable enough. In
some cases rubygems would have already loaded and ignore these settings.

Fixes #14048
 2016-03-19 20:25:34 +00:00
Charles Strahan
2802785675 Merge pull request #13975 from aespinosa/proper-script-gempaths 
buildRubyGem: use Gem.use_paths to load gems
 2016-03-19 16:15:50 -04:00