Commit Graph

1239 Commits

Author SHA1 Message Date
Michael Raskin
5f418b75d6 nauty: init at 26r7 2016-10-26 11:06:36 +02:00
Michael Raskin
a67a50895c gfan: init at 0.5 2016-10-26 11:06:36 +02:00
Michael Raskin
71f659d86d pari_alpha: init at 2.8.0.alpha: planning to use for Sage 2016-10-26 11:06:34 +02:00
Michael Raskin
411d5742ca symmetrica: init at 2.0 2016-10-26 11:06:33 +02:00
Michael Raskin
c450d7b0a8 ratpoints: init at 2.1.3 2016-10-26 11:06:33 +02:00
Frederik Rietdijk
e56832d730 Merge remote-tracking branch 'upstream/master' into HEAD 2016-10-22 17:23:24 +02:00
Vladimír Čunát
4328629bf8 treewide: fix meta evaluation
There is no `stdenv.maintainers`. /cc @veprbl.
2016-10-22 12:05:23 +02:00
Jörg Thalheim
9c0b5e4b22 Merge pull request #19666 from veprbl/hep_for_upstream
Add fastjet, hepmc, yoda, rivet, lhapdf, herwig, pythia, sacrifice, nlojet++
2016-10-21 21:58:45 +02:00
Dmitry Kalinkin
ef96b48659
root: s/python/python2/ 2016-10-21 15:47:38 -04:00
Dmitry Kalinkin
59a8aff8e6
root: add veprbl to maintainers 2016-10-21 13:30:30 -04:00
Dmitry Kalinkin
b4e3e7b752
add veprbl to maintainers 2016-10-21 13:29:57 -04:00
=
d6880b210c
yarp: 2.3.65 -> 2.3.66.1 2016-10-20 19:34:03 +02:00
Dmitry Kalinkin
3324d8dc72
sacrifice: init at 1.0.0 2016-10-19 02:17:16 -04:00
Frederik Rietdijk
8963dae343 z3: use python2 2016-10-18 23:16:07 +02:00
Shea Levy
eca0f17ad2 nix-buffer support improvements.
Use inherit-local, add per-package elisp hooks.
2016-10-07 10:31:37 -04:00
Kirill Boltaev
3e646865f4 treewide: use ocaml.version (#19192) 2016-10-05 09:32:30 +02:00
Aneesh Agrawal
fcee1d0b28
Remove redundant -DCMAKE_BUILD_TYPE=Release flags
Since commit 183d05a0 in 2012, this is the default.

fixes #18000
2016-10-01 16:13:41 +02:00
Brian McKenna
57e1250d89 redprl: remove explicit builder
patchPhase wasn't being called for me so I've switched out the explicit
builder for the generic form. I can now build RedPRL on locally on
NixOS.
2016-09-29 10:52:29 +10:00
Anthony Cowley
a523351314 redprl: patch install script shebangs 2016-09-27 18:24:06 -04:00
Joachim F
19d3b1aa5f Merge pull request #19004 from nico202/fix-gazebo-cmake
gazebo7: Fix gazebo-config.cmake output file
2016-09-27 16:32:32 +02:00
=
efb56cec43
gazebo7: Fix gazebo-config.cmake output file 2016-09-27 10:30:27 +02:00
Kirill Boltaev
2bc87d48f1 scilab: mark as broken 2016-09-26 02:36:49 +03:00
Kirill Boltaev
06ecea00e5 glsurf: mark as broken 2016-09-26 02:36:49 +03:00
Kirill Boltaev
e61663a233 treewide: move to ocaml-ng system 2016-09-26 02:36:49 +03:00
Anthony Cowley
a3c26fec32 redprl: init at 2016-09-22 2016-09-23 20:37:20 -04:00
Vincent Laporte
c78c2b98c4 ecm: set meta.platforms to linux only 2016-09-21 19:14:11 +02:00
Gabriel Ebner
dd4a015aa8 eprover: 1.9 -> 1.9.1 2016-09-20 11:57:14 -04:00
Joachim F
e22dd2f6c5 Merge pull request #18740 from chris-martin/tulip-4-9
Tulip: 4.1.0 -> 4.9.0
2016-09-20 14:34:17 +02:00
Ram Kromberg
a729d6ee55 calc: remove redundant groff dependency 2016-09-19 01:37:45 +03:00
Chris Martin
08e5949235 tulip: 4.1.0 -> 4.9.0 2016-09-18 15:24:29 -04:00
Dmitry Kalinkin
7b9deaba81 root: add setup-hook 2016-09-18 04:45:18 -04:00
Nikolay Amiantov
4748709926 Merge commit 'refs/pull/18498/head' of git://github.com/NixOS/nixpkgs 2016-09-13 12:51:34 +03:00
Franz Pletz
fb9117efa6 Merge pull request #18488 from chris-martin/md5-2
Miscellaneous packages: Use sha256 instead of md5 (part 2)
2016-09-13 07:11:43 +02:00
Kirill Boltaev
bccd75094f treewide: explicitly specify gtk and related package versions 2016-09-12 18:26:06 +03:00
Dmitry Kalinkin
5646c2aba6 root: add support for x86_64-darwin
1) add pcre dependency (for some reason builtin_pcre doesn't work)
2) Disable dependencies that are currently not supported by the
expression.  Most users should not need those. These are disabled to
prevent cmake from picking them up from system and causing impurities.
Once there is a user who needs these they will have to update the
expression.
3) disable some OSX detection code that relies on /usr/bin/sw_vers
that chooses c++ library, silences warnings and sets macosx-version-min.
macosx-version-min is already set by nix using MACOSX_DEPLOYMENT_TARGET
environment variable.
2016-09-11 17:29:13 -04:00
Chris Martin
e417a63e61 scilab: md5->sha256 2016-09-10 13:50:10 -04:00
Dan Peebles
f285ce8fed twelf: fix emacs mode 2016-09-08 23:12:32 -04:00
Michael Raskin
b924cdefa5 tptp: take into account upstream tarball hash change; one file got renamed and some statistics in the documentation got regenerated 2016-09-08 16:49:22 +02:00
obadz
2919375c91 minc_tools: don't run tests which have been failing since first pkged 2016-09-05 17:26:12 +01:00
Domen Kožar
9e363a752f openmodelica: enable parallel building
(cherry picked from commit 261d51971a352cbcdc8d70dc74f8971ac202a43d)
Signed-off-by: Domen Kožar <domen@dev.si>
2016-09-05 18:06:28 +02:00
Joachim F
3d852770db Merge pull request #18164 from moyamo/geogebra
geogebra: 5.0.265.0 -> 5.0.271.0
2016-09-03 17:06:54 +02:00
Tuomas Tynkkynen
3364230d56 Disable bunch of non-compiling packages on Darwin
These ones have a "Last successful build" timestamp in the 2014s or
2015s. Presumably no one will notice if we now stop building them.

softether_4_18              2015-09-20  http://hydra.nixos.org/build/39418483
lensfun                     2014-09-30  http://hydra.nixos.org/build/39394104
net_snmp                    2015-09-20  http://hydra.nixos.org/build/39410553
djview                      2015-08-11  http://hydra.nixos.org/build/39413233
libmusicbrainz2             2015-09-20  http://hydra.nixos.org/build/39410106
fox_1_6                     2014-05-07  http://hydra.nixos.org/build/39410858
libofx                      2015-09-24  http://hydra.nixos.org/build/39423507
yacas                       2014-09-30  http://hydra.nixos.org/build/39393150
iomelt                      2014-09-30  http://hydra.nixos.org/build/39408486
softether                   2015-09-20  http://hydra.nixos.org/build/39425800
mp4v2                       2014-09-30  http://hydra.nixos.org/build/39421899
virtuoso7                   2014-09-21  http://hydra.nixos.org/build/39415206
man_db                      2015-04-23  http://hydra.nixos.org/build/39404236
libdiscid                   2014-09-30  http://hydra.nixos.org/build/39412202
zabbix22.agent              2014-09-21  http://hydra.nixos.org/build/39412149
vidalia                     2015-08-06  http://hydra.nixos.org/build/39411500
libmtp                      2015-09-20  http://hydra.nixos.org/build/39419199
wxGTK29                     2015-09-20  http://hydra.nixos.org/build/39415296
ncmpcpp                     2015-11-06  http://hydra.nixos.org/build/39404455
libtorrent                  2014-09-21  http://hydra.nixos.org/build/39394646
shishi                      2014-03-21  http://hydra.nixos.org/build/39418874
ocaml_3_12_1                2014-09-30  http://hydra.nixos.org/build/39392996
djview4                     2015-08-11  http://hydra.nixos.org/build/39427799
vimNox                      2014-05-23  http://hydra.nixos.org/build/39397012
ttfautohint                 2015-08-06  http://hydra.nixos.org/build/39398330
libraw                      2015-09-24  http://hydra.nixos.org/build/39402271
wxGTK30                     2015-09-20  http://hydra.nixos.org/build/39401871
sbcl_1_2_5                  2015-09-20  http://hydra.nixos.org/build/39426091
prover9                     2014-09-30  http://hydra.nixos.org/build/39406476
rcs                         2015-08-25  http://hydra.nixos.org/build/39392037
gpac                        2015-09-24  http://hydra.nixos.org/build/39399470
virtuoso6                   2014-09-30  http://hydra.nixos.org/build/39398651
xlslib                      2015-09-24  http://hydra.nixos.org/build/39410387
ucommon                     2015-03-27  http://hydra.nixos.org/build/39414040
commoncpp2                  2014-09-30  http://hydra.nixos.org/build/39420117
virtuoso                    2014-09-21  http://hydra.nixos.org/build/39399978
miniHttpd                   2014-09-30  http://hydra.nixos.org/build/39392925
mpack                       2014-09-26  http://hydra.nixos.org/build/39399535
nbd                         2014-09-26  http://hydra.nixos.org/build/39401367
newsbeuter-dev              2014-07-29  http://hydra.nixos.org/build/39406259
gimp_2_8                    2015-09-20  http://hydra.nixos.org/build/39436271
gimp                        2015-09-20  http://hydra.nixos.org/build/39435976
zabbix20.agent              2014-09-30  http://hydra.nixos.org/build/39393242
gst_all_1.gst-plugins-good  2015-09-20  http://hydra.nixos.org/build/39408506
ocaml_4_00_1                2014-09-30  http://hydra.nixos.org/build/39399526
inadyn                      2014-09-30  http://hydra.nixos.org/build/39426389
gst_all_1.gst-plugins-bad   2015-09-20  http://hydra.nixos.org/build/39392970
zabbix.agent                2014-09-30  http://hydra.nixos.org/build/39421412
cmake-2_8                   2015-09-24  http://hydra.nixos.org/build/39399443
liblastfm                   2015-08-06  http://hydra.nixos.org/build/39421812
newsbeuter                  2014-07-29  http://hydra.nixos.org/build/39396605
sdcv                        2014-09-26  http://hydra.nixos.org/build/39412928
2016-09-01 20:39:33 +03:00
Adrien Devresse
28d2d78b55 neuron: fix issue with incorrectly prefixed python path 2016-09-01 13:41:26 +02:00
Tuomas Tynkkynen
8c4aeb1780 Merge staging into master
Brings in:
    - changed output order for multiple outputs:
      https://github.com/NixOS/nixpkgs/pull/14766
    - audit disabled by default
      https://github.com/NixOS/nixpkgs/pull/17916

 Conflicts:
	pkgs/development/libraries/openldap/default.nix
2016-09-01 13:27:27 +03:00
Frederik Rietdijk
684f08166c fixup 2016-09-01 12:03:10 +02:00
Adrien Devresse
ae2800378f neuron: fix issue #17914 -> Add python bindings to neuron derivation and minor fixes
- Add support for python bindings
- make neuron respect standard pythonpath prefix
- force exec_prefix == prefix to respect standard nix file hierarchy
- normalize indentation
- propagate dependencies necessary for nrniv_makefile usage
- Add support for darwin
2016-09-01 12:03:10 +02:00
Mohammed Yaseen Mowzer
921682a4d5 geogebra: 5.0.265.0 -> 5.0.271.0 2016-08-31 18:31:56 +02:00
Tuomas Tynkkynen
b87a2245b1 root: Fix libc dev reference 2016-08-31 12:54:28 +03:00
Tuomas Tynkkynen
d3dc3d4130 Merge remote-tracking branch 'dezgeg/shuffle-outputs' into staging
https://github.com/NixOS/nixpkgs/pull/14766
2016-08-30 12:43:37 +03:00
Tuomas Tynkkynen
aef35c52f0 treewide: Fix output references to libX11 2016-08-30 03:40:23 +03:00
Tuomas Tynkkynen
c3bcb4e1ce treewide: Use explicit 'dev' references to glibc 2016-08-30 03:11:09 +03:00
Vincent Laporte
17af87323d maxima: 5.36.1 -> 5.38.1 2016-08-29 15:52:05 +02:00
Robin Gloster
005a147f92
sage: fix build
closes #17842
2016-08-29 12:46:51 +00:00
obadz
57ddc155fc Merge branch 'master' into staging
Conflicts:
	pkgs/games/scummvm/default.nix
2016-08-28 12:20:59 +01:00
Gabriel Ebner
497b3cabcc libqalculate, qalculate-gtk: 0.9.8 -> 0.9.9 2016-08-28 10:40:33 +02:00
obadz
3de6e5be50 Merge branch 'master' into staging
Conflicts:
      pkgs/applications/misc/navit/default.nix
      pkgs/applications/networking/mailreaders/alpine/default.nix
      pkgs/applications/networking/mailreaders/realpine/default.nix
      pkgs/development/compilers/ghc/head.nix
      pkgs/development/libraries/openssl/default.nix
      pkgs/games/liquidwar/default.nix
      pkgs/games/spring/springlobby.nix
      pkgs/os-specific/linux/kernel/perf.nix
      pkgs/servers/sip/freeswitch/default.nix
      pkgs/tools/archivers/cromfs/default.nix
      pkgs/tools/graphics/plotutils/default.nix
2016-08-27 23:54:54 +01:00
Nikolay Amiantov
1db4cb750c gravit: fix build 2016-08-28 01:04:18 +03:00
Robin Gloster
9f80e55428
openmodelica: disable format hardening 2016-08-27 21:54:17 +00:00
Robin Gloster
191896e63a
qfsm: disable format hardening 2016-08-27 21:53:49 +00:00
Robin Gloster
eddc0a5549
treewide: fix darwin builds by using getOutput
This fixes eval for pkgs referring to optional static output
2016-08-25 08:44:20 +00:00
Franz Pletz
df275f5b85 treewide: fix darwin builds by referring to stdenv's libc 2016-08-25 02:56:25 +02:00
Robin Gloster
f00c750014 qgroundcontrol: remove unused overrideCC and comment 2016-08-24 22:41:41 +00:00
Robin Gloster
13d7e83bf1 perseus: use default gcc 2016-08-24 22:41:41 +00:00
Robin Gloster
bd44c7fd70 boolector: fix build with multiple outputs 2016-08-24 18:19:40 +00:00
obadz
0e8d2725dc Merge branch 'master' into staging 2016-08-23 18:50:06 +01:00
Tuomas Tynkkynen
282277dbc8 treewide: Use more makeBinPath 2016-08-23 01:18:10 +03:00
obadz
24a9183f90 Merge branch 'hardened-stdenv' into staging
Closes #12895

Amazing work by @globin & @fpletz getting hardened compiler flags by
enabled default on the whole package set
2016-08-22 01:19:35 +01:00
Michael Raskin
14736fcf4c openmodelica: fix libgfortran.so search 2016-08-20 21:52:21 +02:00
Austin Seipp
cc7b072157 nixpkgs: abc-verifier 20160813 -> 20160818
Signed-off-by: Austin Seipp <aseipp@pobox.com>
2016-08-19 01:55:13 +00:00
Robin Gloster
99cb230b47 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-08-14 09:09:20 +00:00
Austin Seipp
97e5b88d06 nixpkgs: abc-verifier 20150614 -> 20160813
Signed-off-by: Austin Seipp <aseipp@pobox.com>
2016-08-13 17:48:42 +00:00
Franz Pletz
bd4490e277 Merge branch 'master' into hardened-stdenv 2016-08-13 16:59:55 +02:00
Luca Bruno
27f294f38d Merge pull request #17589 from cmfwyp/sagemath
sagemath: update mirrors, fix TeX Live dependency
2016-08-12 21:58:41 +01:00
Robin Gloster
b7787d932e Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-08-12 09:46:53 +00:00
Robin Gloster
40d217b90e Merge pull request #17657 from matthewbauer/darwin-misc
Darwin misc. fixes
2016-08-11 16:41:34 +00:00
Michael Raskin
d1951974df golly: 2.7 -> 2.8 2016-08-11 17:57:35 +02:00
Michael Raskin
da4b7afea8 pari: 2.7.5 -> 2.7.6 2016-08-11 17:57:35 +02:00
Matthew Bauer
96322f6926 bcftools: fix darwin building
gcc not available
2016-08-10 22:48:19 -05:00
Matthew Bauer
ee63056476 aspino: patch to use c++ instead of g++ 2016-08-10 22:29:18 -05:00
Matthew Bauer
b3cb07e130 lie: only build on linux
Darwin build fails from conflicts in libSystem:

In file included from altdom.c:1:
In file included from /private/var/folders/7t/4vz31njj37b8y_bg6z3t7tk00000gn/T/nix-build-LiE-2.2.2.drv-0/LiE/lie.h:34:
In file included from /nix/store/9ll4m9yx854hr64fn1w9ra3qimm3pzdk-Libsystem-osx-10.9.5/include/string.h:176:
/nix/store/9ll4m9yx854hr64fn1w9ra3qimm3pzdk-Libsystem-osx-10.9.5/include/strings.h:73:7: error: redefinition of 'index' as different kind of symbol
char    *index(const char *, int) __POSIX_C_DEPRECATED(200112L);
         ^
/private/var/folders/7t/4vz31njj37b8y_bg6z3t7tk00000gn/T/nix-build-LiE-2.2.2.drv-0/LiE/lie.h:6:14: note: previous definition is here
typedef long index;
             ^
1 error generated.
2016-08-10 21:06:22 -05:00
Matthew Bauer
d4b1289592 lie: LiE -> lie
Attributes need to be lowercase, see https://nixos.org/nixpkgs/manual/#sec-package-naming.
2016-08-10 21:04:16 -05:00
obadz
8df7571bbc geogebra: don't build on hydra since derivation just unpacks jars 2016-08-10 14:35:14 +01:00
Mohammed Yaseen Mowzer
04f0cb86d0 geogebra: init at 5.0.265.0
Closes #17400
2016-08-10 14:32:09 +01:00
cmfwyp
179d992427
sage: fix TeX Live input
The Sage derivation had texLive, the old TeX Live packaging which
is now marked as broken, as a build input. This replaces it by the
current TeX Live packaging.

However, the build remains broken. One of the problems can be
solved by patching the hashbangs at the beginning of build scripts,
but the build still gets stuck while building ncurses.
2016-08-07 23:18:47 -04:00
Tuomas Tynkkynen
fdde95e096 msieve: Broken on i686
http://hydra.nixos.org/build/38236222
2016-08-06 17:06:45 +03:00
Tuomas Tynkkynen
f87f37c1ee bwa: Broken on i686
http://hydra.nixos.org/build/38236956
2016-08-06 17:06:45 +03:00
Erik Rybakken
37aff96daf ripser: init at 1.0 (#17481) 2016-08-04 10:21:48 +02:00
Robin Gloster
1b979d8384 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-08-03 13:34:44 +00:00
Tuomas Tynkkynen
21f17d69f6 treewide: Add lots of meta.platforms
Build-tested on x86_64 Linux & Mac.
2016-08-02 21:42:43 +03:00
Tuomas Tynkkynen
102ffa6be7 treewide: Wrap some really long package descriptions 2016-08-02 21:17:44 +03:00
Tuomas Tynkkynen
59ce911810 treewide: Some EOF-whitespace fixes 2016-08-02 21:17:44 +03:00
Tuomas Tynkkynen
1bf5ded193 treewide: Lots of meta.hydraPlatforms -> meta.platforms
In all of these files, there is no meta.platforms but only
meta.hydraPlatforms, which doesn't seem to have any purpose except being
inconsistent.
2016-08-02 21:17:44 +03:00
Robin Gloster
63c7b4f9a7 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-07-31 20:51:34 +00:00
Robert Helgesson
8878e8ec05 leo2: remove use of builderDefsPackage (#17398) 2016-07-31 13:57:29 +02:00
Ram Kromberg
78d82f33ac alliance: 5.0 -> 5.1.1 (#17353) 2016-07-30 15:35:51 +01:00
Dmitry Kalinkin
4449ecb617 root: 6.04.16 -> 6.04.18 (#17265)
root: compile against external gsl

Revert "Revert "root: enable parallel building""

This reverts commit ee1a10ee6b.

ROOT has no problems with parallel build. The problems that caused the
original commit were not related to parallel building.
2016-07-30 01:41:37 +01:00
Robin Gloster
154af9e67d Merge pull request #9499 from khumba/scilab-bin-5
scilab-bin: init at 5.5.2
2016-07-28 16:43:08 +02:00
Marco Maggesi
c28eb6c2ba Update HOL Light to version 2016-07-23. 2016-07-28 15:56:20 +02:00
Bryan Gardiner
ed071594e5
scilab-bin: init at 5.5.2
A built-from-source Scilab 5 package looks to be a lot more work, and some
dependencies are missing from Nixpkgs, but the binary version with bundled
dependencies works.
2016-07-27 21:30:12 -07:00
Gabriel Ebner
f970bc67c7 lean: 20160117 -> 2016-07-05
Fixes #17260.
2016-07-27 11:01:45 +02:00
Robin Gloster
f222d98746 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-07-25 12:47:13 +00:00
Gabriel Ebner
9082476478 cvc4: 1.4 -> 1.5pre-smtcomp2016 2016-07-24 13:11:17 +02:00
Robert Helgesson
1012508356 stellarium: 0.14.2 -> 0.14.3 2016-07-22 23:13:35 +02:00
Robert Helgesson
1bedecb4f9 stellarium: wrap binary using wrapQtProgram
Fixes #13582 where Stellarium segfaults when starting.
2016-07-22 22:21:17 +02:00
Gabriel Ebner
82f087944b metis-prover: 2.3.20160102 -> 2.3.20160713 2016-07-21 18:41:26 +02:00
Robin Gloster
203846b9de Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-07-19 10:37:02 +00:00
Gabriel Ebner
530a9ab981 Merge remote-tracking branch 'vbgl/why3-0.87.1' 2016-07-18 13:33:50 +02:00
Ben Darwin
a896233396 jags: 3.4.0 -> 4.1.0 (#16804)
* jags: 3.4.0 -> 4.1.0
* unbreak rjags and dependent packages
2016-07-18 13:11:18 +02:00
vbgl
d7cfdc581c coq: 8.5pl1 -> 8.5pl2 (#16863) 2016-07-18 11:33:51 +02:00
Nikolay Amiantov
aefd8c420c Merge pull request #17043 from womfoo/fix/qmake4Hook-builds
reintroduce qmake .pro files after qmake4Hook changes
2016-07-18 00:11:24 +04:00
Kranium Gikos Mendoza
dd778f1756 fritzing: fix qmake4Hook build
pass phoenix.pro and return unpack logic which were removed in 0b88755
2016-07-17 22:40:27 +08:00
Joachim F
d9701350f9 Merge pull request #16951 from heilkn/lie
LiE: include forgotten file INFO.a by installation
2016-07-16 19:54:23 +02:00
Michael Raskin
61a3610853 tptp: 6.3.0 -> 6.4.0 2016-07-16 11:34:32 +02:00
Konstantin Heil
c0656fe0c1 LiE: include forgotten file INFO.a by installation 2016-07-14 14:18:57 +02:00
Franz Pletz
26dd9acba5 Merge remote-tracking branch 'origin/master' into hardened-stdenv 2016-07-09 13:21:28 +02:00
Konstantin Heil
b92c429799 LiE: init at 2.2.2 2016-06-30 21:04:41 +02:00
Vladimír Čunát
3afa246038 Merge branch 'staging'
This includes a security update of expat.
2016-06-29 07:47:04 +02:00
Austin Seipp
25bf4a5634 cryptoverif: init at 1.22
Signed-off-by: Austin Seipp <aseipp@pobox.com>
2016-06-28 04:37:29 +00:00
Austin Seipp
a69799c740 statverif: init at 1.86pl4
Signed-off-by: Austin Seipp <aseipp@pobox.com>
2016-06-28 04:36:11 +00:00
Austin Seipp
be19637b2a proverif: init at 1.94
Signed-off-by: Austin Seipp <aseipp@pobox.com>
2016-06-28 04:36:11 +00:00
Ta'iř sj Ořit
3832ebde8b gephi: init at 0.9.1 (#16071) 2016-06-26 22:40:00 +02:00
mimadrid
5c7a75412e
igv: init at 2.3.77 2016-06-26 19:27:56 +02:00
Joachim Fasting
46b07b335b Merge pull request #16379 from mimadrid/init/bcftools-1.3.1
bcftools: init at 1.3.1
2016-06-24 22:15:51 +02:00
mimadrid
d91d245f16
bcftools: init at 1.3.1 2016-06-24 21:08:17 +02:00
mimadrid
14feec44e4
samtools: refactoring 2016-06-24 21:08:17 +02:00
Vladimír Čunát
6b27ceb006 Merge 'master' into staging and re-revert merge
... from staging to master, reverted temporarily in aa9a04883e.
2016-06-23 12:09:03 +02:00
Vladimír Čunát
aa9a04883e Revert "Merge branch 'staging'" due to glibc
The main output started to retain dependency on bootstrap-tools; see
https://github.com/NixOS/nixpkgs/pull/15867#issuecomment-227949096

This reverts commit c05d829598, reversing
changes made to f073df60d6.
2016-06-23 09:25:10 +02:00
Vladimír Čunát
c05d829598 Merge branch 'staging' 2016-06-22 10:49:56 +02:00
Gabriel Ebner
0a8e613cea aspino: init at 2016-01-31 2016-06-21 13:55:28 +02:00
Gabriel Ebner
8f84a5cb08 glucose, glucose-syrup: init at 4.0 2016-06-21 13:26:51 +02:00
Gabriel Ebner
9c5588e99f spass: 3.7 -> 3.9 2016-06-21 08:18:20 +02:00
Michael Raskin
ca495a53a5 tptp: fix hash 2016-06-20 18:38:08 +02:00
Bjørn Forsman
bd01fad0ed Captialize meta.description of all packages
In line with the Nixpkgs manual.

A mechanical change, done with this command:

  find pkgs -name "*.nix" | \
      while read f; do \
          sed -e 's/description\s*=\s*"\([a-z]\)/description = "\u\1/' -i "$f"; \
      done

I manually skipped some:

* Descriptions starting with an abbreviation, a user name or package name
* Frequently generated expressions (haskell-packages.nix)
2016-06-20 13:55:52 +02:00
Gabriel Ebner
727716cd82 speedcrunch: 0.11-alpha -> 0.11 2016-06-19 18:45:04 +02:00
Gabriel Ebner
e5b3b685f4 libqalculate, qalculate-gtk: 0.9.7 -> 0.9.8 2016-06-19 17:33:45 +02:00
Gabriel Ebner
cc0b3bbcc2 minisat: support clang 2016-06-19 15:19:25 +02:00
Vladimír Čunát
e757404555 Merge branch 'master' into staging
Hydra nixpkgs: ?compare=1279790
2016-06-19 12:33:04 +02:00
Vladimír Čunát
97c484a10f treewide: fix #include errors after gcc-5.4
They were mostly missing <cmath> or <math.h>.
2016-06-19 10:18:30 +02:00
mimadrid
aa8eba9d95
weka: 3.6.12 -> 3.8.0
Closes #16055
2016-06-16 15:47:48 +02:00
mimadrid
9b7a53d9cb
cytoscape: init at 3.4.0
Closes #16197
2016-06-16 15:47:21 +02:00
Robin Gloster
8031cba2ab Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-06-10 09:27:04 +00:00
Christopher Lübbemeier
ac4903284c gmsh: init at 2.12.0 2016-06-09 18:54:26 +02:00
Vincent Laporte
a577b3666e why3: 0.87.0 -> 0.87.1 2016-06-09 09:51:38 +02:00
Luis Pedro Coelho
bd617cb185 init bwa at 0.7.15
Closes #16064
2016-06-08 17:25:20 +01:00
Tuomas Tynkkynen
f1d83444a5 openmodelica: Use makeLibraryPath 2016-06-07 21:18:02 +03:00
Joachim Fasting
e65698db0b Merge pull request #15939 from ChrisJefferson/fix-gap
gap : 4.4.12 -> 4.8.3
2016-06-04 01:14:09 +02:00
Chris Jefferson
75f793bbb2 gap : 4.4.12 -> 4.8.3 2016-06-03 19:01:12 +01:00
Tuomas Tynkkynen
bac26e08db Fix lots of fetchgit hashes (fallout from #15469) 2016-06-03 17:17:08 +03:00
Robin Gloster
2d382f3d98 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-05-30 19:39:34 +00:00
Nikolay Amiantov
51f479465c qgroundcontrol: fix build 2016-05-29 19:51:22 +03:00
Moritz Ulrich
7b2fab05f3 Merge pull request #15606 from dvc94ch/fpga-toolchain-updates
FPGA toolchain updates
2016-05-28 15:41:10 +02:00
Vladimír Čunát
e4832c7541 Merge branch 'staging'
Includes a security update of libxml2.
2016-05-27 15:58:40 +02:00
Vladimír Čunát
81039713fa Merge branch 'master' into staging
... to get the systemd update (rebuilding ~7k jobs).
2016-05-26 16:50:22 +02:00
Vladimír Čunát
ee1a10ee6b Revert "root: enable parallel building"
This reverts commit 2991fdca52.
Hydra builds often report missing various files.
2016-05-26 16:27:59 +02:00
Tobias Geerinckx-Rice
dce1edf946
samtools: 1.3 -> 1.3.1 2016-05-25 02:06:47 +02:00
Nicolò Balzarotti
c1c0c99af3 yarp: 2.3.64 -> 2.3.65 (#15662) 2016-05-24 13:30:52 +02:00
David Craven
509ce20ded verilog: 0.97 -> 2016.05.21 2016-05-22 07:38:57 +02:00
David Craven
ce3d510d90 verilator: 3.874 -> 3.884 2016-05-22 07:38:57 +02:00
Tuomas Tynkkynen
8d473f107c treewide: Make explicit that 'dev' output of readline is used 2016-05-19 10:03:35 +02:00
Tuomas Tynkkynen
47c45e2041 treewide: Make explicit that 'dev' output of gmp is used 2016-05-19 10:00:36 +02:00
Tuomas Tynkkynen
85a51074dc treewide: Make explicit that 'dev' output of atk is used 2016-05-19 10:00:25 +02:00
Franz Pletz
f8d481754c
Merge remote-tracking branch 'origin/master' into hardened-stdenv 2016-05-18 17:10:02 +02:00
Peter Simons
8e462995ba Bring my stdenv.lib.maintainers user name in line with my github nick. 2016-05-16 22:49:55 +02:00
Vladimír Čunát
6c2fbfbd77 Merge branch 'master' into staging 2016-05-12 04:53:38 +02:00
Bjørn Forsman
300e495101 sigrok: update whole suite to latest (2016-01)
Release announcement, 2016-01-30:
https://www.sigrok.org/blog/major-sigrok-releases-libsigrok-libsigrokdecode-sigrok-cli-pulseview

I first tried updating the projects in separate commits. But later I
found cyclic dependencies, that would break git bisect, so I ended up
squashing the commits:

* libsigrok: 0.3.0 -> 0.4.0
  Enable building libsigrokcxx.so, the C++ bindings for libsigrok, by
  adding doxygen, glibmm and python as build deps. This is needed for
  Pulseview >= 0.3.0. Also update the firmware (sigrok-firmware-fx2lafw)
  while at it.

* libsigrokdecode: 0.3.0 -> 0.4.0

* sigrok-cli: 0.5.0 -> 0.6.0

* pulseview: 0.2.0 -> 0.3.0
  New dependency: glibmm (due to libsigrokcxx.pc from libsigrok).

Note that collectd is incompatible with the new libsigrok release, so
I let it use the old one (0.3.0).
2016-05-11 22:23:29 +02:00
Eelco Dolstra
7ce5d43c63 Fix some URLs that lacked a URI scheme 2016-05-09 19:35:05 +02:00
Vladimír Čunát
65a9fa8cdc Merge branch 'master' into staging 2016-05-08 21:24:48 +02:00
Gabriel Ebner
516f331227 minisat: migrate from builderDefsPackage to mkDerivation 2016-05-08 15:32:58 +02:00
Gabriel Ebner
3f19d757cb veriT: disable broken static linking 2016-05-08 15:11:29 +02:00
Vladimír Čunát
1dc36904d8 Merge #14920: windows improvements, mainly mingw 2016-05-05 08:30:19 +02:00
Joachim Fasting
35efc53274 Merge pull request #15214 from taku0/lp_solve_isnan
lp_solve: fixed build error due to defining isnan
2016-05-04 20:55:51 +02:00
taku0
f2bab58b3e lp_solve: change source URL to mirror 2016-05-04 22:17:56 +09:00
taku0
3fa49d5ac4 lp_solve: updated description 2016-05-04 22:03:22 +09:00
taku0
725c85c720 lp_solve: fixed build error due to defining isnan 2016-05-04 19:58:05 +09:00
Tuomas Tynkkynen
aadaa91379 Merge remote-tracking branch 'upstream/master' into staging
Conflicts:
	pkgs/applications/networking/browsers/vivaldi/default.nix
	pkgs/misc/emulators/wine/base.nix
2016-05-03 23:12:48 +03:00
Robin Gloster
c92bca56f8 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-05-02 22:58:02 +00:00
Vincent Laporte
60a7c607d1 hol-light: fix build with camlp5-6.16 2016-05-01 16:10:09 +02:00
Nikolay Amiantov
87ebab128a replace ${stdenv.cc.cc}/lib occurences 2016-05-01 00:13:23 +03:00
Tuomas Tynkkynen
4ff8f377af Merge remote-tracking branch 'upstream/master' into staging 2016-04-28 00:13:53 +03:00
Tuomas Tynkkynen
ca0e724266 otter: Mark broken
Build hangs an hits the hydra time limit:
http://hydra.nixos.org/build/34897110
2016-04-27 03:24:04 +03:00
Edward Tjörnhammar
f027aa2059
jonprl: corrected sha change 2016-04-26 22:23:37 +02:00
Frederik Rietdijk
d5e6a4494a Python: use PyPI mirror (#15001)
* mirrors: add pypi

* Python: Use pypi mirror for all PyPI packages
2016-04-26 13:38:03 +01:00
Dmitry Kalinkin
088601cb51 root: fix chrooted build, workaround 491f7f017c (cmake: set LIBDIR and INCLUDEDIR for multiple outputs) 2016-04-25 17:38:19 -04:00
Nikolay Amiantov
ab0a0c004e makeSearchPathOutputs: refactor to makeSearchPathOutput 2016-04-25 13:24:39 +03:00
Vladimír Čunát
e9379f7416 Merge branch 'staging'
This includes a fix to closure-size regression that moved
share/doc/*/ to share/doc/
2016-04-22 16:49:09 +02:00
Vincent Laporte
71e0ce571b csdp: fix build on Darwin
When the `INSTALL` file is present, `make` claims that the `install`
target is up-to-date.
2016-04-22 11:53:43 +02:00
Nikolay Amiantov
fb2c651647 qgroundcontrol: move to qmakeHook
This reverts commit 11294eaf16.
2016-04-20 18:55:48 +03:00
Nikolay Amiantov
0b88755d37 fritzing: move to qmakeHook
This reverts commit 81fc546df3.
2016-04-20 18:55:47 +03:00
Dmitry Kalinkin
f2200369e5 root: fix NixOS build, build with lzma from nix, update homepage url 2016-04-20 01:41:46 -04:00
Robin Gloster
d020caa5b2 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-04-18 13:49:22 +00:00
Dmitry Kalinkin
baded4ea96 root: 5.34.15 -> 6.04.16 2016-04-17 22:59:31 -04:00
aszlig
11294eaf16
qgroundcontrol: Fix running of {pre,post}Configure
Commit 0055c6a introduced a new preConfigure hook that sets the right
qmake path. Unfortunately the mkDerivation attributes of qgroundcontrol
override the whole configurePhase, so this hook isn't run at all.

Instead of using pushd/popd, I'm making it a bit more readable by just
spawning a subshell with the right working directory.

This fixes the build of qgroundcontrol and it now successfully compiles
on my machine.

Signed-off-by: aszlig <aszlig@redmoonstudios.org>
2016-04-15 05:26:02 +02:00
aszlig
01900ac06e
qgroundcontrol: Drop unused preConfigure phase
The configurePhase is overridden here and the preConfigure hook isn't
referenced otherwise in the package, so it's basically dead code.

Signed-off-by: aszlig <aszlig@redmoonstudios.org>
2016-04-15 05:26:02 +02:00
aszlig
81fc546df3
fritzing: Fix running of {pre,post}Configure
Commit 0055c6a introduced a new preConfigure hook that sets the right
qmake path. Unfortunately the mkDerivation attributes of fritzing
override the whole configurePhase, so this hook isn't run at all.

This fixes the build of fritzing and it now successfully compiles on my
machine.

Signed-off-by: aszlig <aszlig@redmoonstudios.org>
2016-04-15 05:26:02 +02:00
Nikolay Amiantov
6f3e72eef6 Merge pull request #14658 from abbradar/search-path-fixes
Search path fixes
2016-04-14 03:08:41 +04:00
Arseniy Seroka
0420a532e9 Merge pull request #14649 from vbgl/coq_8.5.1
Coq 8.5pl1
2016-04-13 22:16:48 +03:00
Nikolay Amiantov
8b7ebaffeb replace makeSearchPath tree-wise to take care of possible multiple outputs 2016-04-13 22:09:41 +03:00
Vladimír Čunát
39ebb01d6e Merge branch 'staging', containing closure-size #7701 2016-04-13 09:25:28 +02:00
joachifm
860aa01782 Merge pull request #14618 from moretea/update_mcrl2
Update mcrl2
2016-04-12 23:42:45 +02:00
Maarten Hoogendoorn
ec098aad41 mcrl2: 2009.01 -> 2014.09 2016-04-12 22:16:30 +02:00
Tuomas Tynkkynen
d7de8bc911 Merge pull request #14636 from kragniz/samtools
samtools: init at 1.3
2016-04-12 22:24:34 +03:00
Louis Taylor
70c1b2b1c0 samtools: init at 1.3 2016-04-12 20:13:40 +01:00
Vincent Laporte
a036fda544 coq: 8.5 -> 8.5pl1 2016-04-12 19:43:11 +02:00
Vladimír Čunát
30f14243c3 Merge branch 'master' into closure-size
Comparison to master evaluations on Hydra:
  - 1255515 for nixos
  - 1255502 for nixpkgs
2016-04-10 11:17:52 +02:00
Robin Gloster
3e68106afd Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-04-07 21:52:26 +00:00
Vladimír Čunát
d1df28f8e5 Merge 'staging' into closure-size
This is mainly to get the update of bootstrap tools.
Otherwise there were mysterious segfaults:
https://github.com/NixOS/nixpkgs/pull/7701#issuecomment-203389817
2016-04-07 14:40:51 +02:00
Damien Cassou
8f7d11e39c Merge pull request #14468 from vbgl/why3-0.87
why3: 0.86.3 -> 0.87.0
2016-04-05 19:15:52 +02:00
Vincent Laporte
9dfa26d2ce why3: 0.86.3 -> 0.87.0 2016-04-05 08:09:00 +02:00
Robin Gloster
bbbaccfa68 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-04-04 15:24:52 +00:00
Robin Gloster
025cedc606 singular.i686-linux: turn off stackprotector hardening 2016-04-03 12:25:05 +00:00
Robin Gloster
696d85a62d Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-04-03 11:01:57 +00:00
Gabriel Ebner
e336cd003a picosat: enable proof output and install various utils 2016-04-02 18:45:47 +02:00
Gabriel Ebner
659c240be8 picosat: 960 -> 965 2016-04-02 18:43:32 +02:00
Chris Ostrouchov
a32d5d3755 lammps: init at 2016-02-16 2016-04-01 18:37:52 -04:00
Vladimír Čunát
ab15a62c68 Merge branch 'master' into closure-size
Beware that stdenv doesn't build. It seems something more will be needed
than just resolution of merge conflicts.
2016-04-01 10:06:01 +02:00
joachifm
0660ff5625 Merge pull request #14334 from ne0phyte/kicad-4.0.2
kicad: 2013 stable -> 4.0.2
2016-03-31 21:01:22 +00:00
Michael Raskin
011f69992a satallax: 1.4 -> 2.7 2016-03-31 16:23:08 +02:00
ne0phyte
cce37d2164 kicad: 2013 stable -> 4.0.2 2016-03-31 15:29:39 +02:00
Franz Pletz
2e08d8234e Merge remote-tracking branch 'origin/master' 2016-03-31 10:06:30 +02:00
Michael Raskin
016d523d82 cvc4: fix the build by skipping line markers in cpp expansions during configure, helps the configure script to find Boost version 2016-03-31 01:52:33 +02:00
joachifm
532beaa2a3 Merge pull request #13913 from grwlf/torch
torch: add expression for Torch7 the machine-learning framework
2016-03-30 14:29:32 +00:00
Robin Gloster
a4e65c3639 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-03-30 09:01:20 +00:00
Patrick Callahan
66b5055b95 gazebo: init at 6.5.1 and 7.0.0 2016-03-28 11:44:37 -07:00
Robin Gloster
f60c9df0ba Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-03-28 15:16:29 +00:00
Patrick Callahan
f30e40df69 qgroundcontrol: init at 2.9.4 2016-03-24 20:06:31 -07:00
Sergey Mironov
de4f541b0e torch: add unsup package 2016-03-22 22:20:45 +03:00
Sergey Mironov
56b34be001 torch: read user PATH and LD_LIBRARY_PATH 2016-03-22 00:57:30 +03:00
Sergey Mironov
6bb8f45182 torch: image, enable JPEG and PNG support 2016-03-22 00:38:52 +03:00
Sergey Mironov
4a36a0c504 torch: unhardcode references to luajit 2016-03-21 12:53:34 +03:00
Joachim Fasting
649c2cd027 lp_solve: mark as broken
See https://hydra.nixos.org/build/32393768/log/raw
2016-03-19 12:46:22 +01:00
Sergey Mironov
a56b9ab5be torch: use default luajit 2016-03-19 12:37:06 +03:00
Arseniy Seroka
1fb354d1ab Merge pull request #14008 from bzizou/scotch
scotch: init at 6.0.4
2016-03-18 22:50:20 +03:00
Bruno Bzeznik Bruno.Bzeznik@imag.fr
75af59f8eb scotch: init at 6.0.4 2016-03-18 10:54:41 +01:00
Sergey Mironov
1b05139414 torch: Read LUA_PATH and LUA_CPATH set by users 2016-03-16 23:53:46 +03:00
Sergey Mironov
f499f61c85 torch: don't use default value for src 2016-03-16 23:53:40 +03:00
Robin Gloster
3f45f0948d Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-03-15 01:44:24 +00:00
Sergey Mironov
7f3b083610 torch: init at torch-git-2016-03-08
Torch is a machine-learning framework written in Lua
2016-03-14 16:05:55 +03:00
Nicolas B. Pierron
72c6f8a140 Ensure that we can evaluate the platform attribute of ocaml packages. 2016-03-13 19:08:26 +00:00
Thomas Tuegel
3ef7671cea ncurses: combine $lib and $out outputs
The $lib output refers to the terminfo database in $out, which is about
10x larger than the ncurses shared library. Splitting these outputs
saves a small amount of space for any derivations that use the terminfo
database but not the ncurses library, but we do not have evidence that
any such exist.
2016-03-08 11:35:24 -06:00
Vladimír Čunát
09af15654f Merge master into closure-size
The kde-5 stuff still didn't merge well.
I hand-fixed what I saw, but there may be more problems.
2016-03-08 09:58:19 +01:00
Franz Pletz
cb3d27df93 Merge remote-tracking branch 'origin/master' into hardened-stdenv 2016-03-05 18:55:30 +01:00
Franz Pletz
aff1f4ab94 Use general hardening flag toggle lists
The following parameters are now available:

  * hardeningDisable
    To disable specific hardening flags
  * hardeningEnable
    To enable specific hardening flags

Only the cc-wrapper supports this right now, but these may be reused by
other wrappers, builders or setup hooks.

cc-wrapper supports the following flags:

  * fortify
  * stackprotector
  * pie (disabled by default)
  * pic
  * strictoverflow
  * format
  * relro
  * bindnow
2016-03-05 18:55:26 +01:00
Peter Simons
288d01fe2b stellarium: update to 0.14.2
This patch also fixes https://github.com/NixOS/nixpkgs/issues/13582.
2016-03-04 23:05:48 +01:00
Vincent Laporte
014a30da93 why3: 0.86.2 -> 0.86.3
And merge with ocamlPackages.why3
(the OCaml library would not work correctly if packaged separately).
2016-03-04 09:29:10 +01:00
Arseniy Seroka
0aac2960fc Merge pull request #13639 from bzizou/gromacs
gromacs: 4.6.5 -> 4.6.7 + MPI support
2016-03-03 23:29:32 +03:00
Robin Gloster
fed49425c5 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-03-03 16:11:55 +00:00
Vincent Laporte
c2a2c2ecd4 ltl2ba: fix build on darwin 2016-03-03 10:24:13 +01:00
Frederik Rietdijk
1d1b0a8ab8 Merge pull request #13510 from lancelotsix/relocate_motu_client
pkgs.motuclient: move application away from pythonPackages
2016-03-02 08:02:53 -05:00
Lluís Batlle i Rossell
a95e65b1eb gtkwave: update to 3.3.70 2016-03-02 12:42:20 +01:00
Lancelot SIX
8f4a7d6c4c pkgs.motuclient: move application away from pythonPackages 2016-03-02 09:41:02 +01:00