Merge staging-next into staging

doc/functions/dockertools.xml

@@ -312,7 +312,23 @@ hello        latest   de2bf4786de6   About a minute ago   25.2MB
       Maximum number of layers to create.
      </para>
      <para>
-      <emphasis>Default:</emphasis> <literal>24</literal>
+      <emphasis>Default:</emphasis> <literal>100</literal>
+     </para>
+     <para>
+      <emphasis>Maximum:</emphasis> <literal>125</literal>
+     </para>
+    </listitem>
+   </varlistentry>
+   <varlistentry>
+    <term>
+     <varname>extraCommands</varname> <emphasis>optional</emphasis>
+    </term>
+    <listitem>
+     <para>
+       Shell commands to run while building the final layer, without access
+       to most of the layer contents. Changes to this layer are "on top"
+       of all the other layers, so can create additional directories
+       and files.
      </para>
     </listitem>
    </varlistentry>

maintainers/maintainer-list.nix

@@ -1484,6 +1484,11 @@
     github = "eadwu";
     name = "Edmund Wu";
   };
+  ealasu = {
+    email = "emanuel.alasu@gmail.com";
+    github = "ealasu";
+    name = "Emanuel Alasu";
+  };
   eamsden = {
     email = "edward@blackriversoft.com";
     github = "eamsden";

nixos/doc/manual/installation/installing.xml

@@ -29,13 +29,14 @@
   </para>
 
   <para>
-   You are logged-in automatically as <literal>root</literal>. (The
-   <literal>root</literal> user account has an empty password.)
+   You are logged-in automatically as <literal>nixos</literal>.
+   The <literal>nixos</literal> user account has an empty password so you
+   can use <command>sudo</command> without a password.
   </para>
 
   <para>
    If you downloaded the graphical ISO image, you can run <command>systemctl
-   start display-manager</command> to start KDE. If you want to continue on the
+   start display-manager</command> to start the desktop environment. If you want to continue on the
    terminal, you can use <command>loadkeys</command> to switch to your
    preferred keyboard layout. (We even provide neo2 via <command>loadkeys de
    neo</command>!)
@@ -65,9 +66,9 @@
 
    <para>
     If you would like to continue the installation from a different machine you
-    need to activate the SSH daemon via <literal>systemctl start
-    sshd</literal>. In order to be able to login you also need to set a
-    password for <literal>root</literal> using <literal>passwd</literal>.
+    need to activate the SSH daemon via <command>systemctl start
+    sshd</command>. You then must set a password for either <literal>root</literal> or
+    <literal>nixos</literal> with <command>passwd></command> to be able to login.
    </para>
   </section>
  </section>

nixos/doc/manual/man-nixos-enter.xml

@@ -34,6 +34,12 @@
     </arg>
      <replaceable>shell-command</replaceable>
    </arg>
+
+   <arg>
+    <arg choice='plain'>
+     <option>--silent</option>
+    </arg>
+   </arg>
     
    <arg>
     <arg choice='plain'>
@@ -100,6 +106,16 @@
      </para>
     </listitem>
    </varlistentry>
+   <varlistentry>
+    <term>
+     <option>--silent</option>
+    </term>
+    <listitem>
+     <para>
+       Suppresses all output from the activation script of the target system.
+     </para>
+    </listitem>
+   </varlistentry>
    <varlistentry>
     <term>
      <option>--</option>

nixos/doc/manual/release-notes/rl-1909.xml

@@ -42,6 +42,12 @@
        set up binfmt interpreters for each of those listed systems.
      </para>
    </listitem>
+   <listitem>
+     <para>
+     The installer now uses a less privileged <literal>nixos</literal> user whereas before we logged in as root.
+     To gain root privileges use <literal>sudo -i</literal> without a password.
+    </para>
+   </listitem>
   </itemizedlist>
  </section>
 
@@ -248,6 +254,15 @@
        If IBus support in Qt 4.x applications is required, add the <literal>ibus-qt</literal> package to your <xref linkend="opt-environment.systemPackages" /> manually.
      </para>
    </listitem>
+   <listitem>
+     <para>
+       The CUPS Printing service now uses socket-based activation by
+       default, only starting when needed. The previous behavior can
+       be restored by setting
+       <option>services.cups.startWhenNeeded</option> to
+       <literal>false</literal>.
+     </para>
+   </listitem>
   </itemizedlist>
  </section>
 

nixos/modules/hardware/device-tree.nix

@@ -0,0 +1,56 @@
+{ config, lib, pkgs, ... }:
+
+with lib;
+
+let
+  cfg = config.hardware.deviceTree;
+in {
+  options = {
+      hardware.deviceTree = {
+        enable = mkOption {
+          default = pkgs.stdenv.hostPlatform.platform.kernelDTB or false;
+          type = types.bool;
+          description = ''
+            Build device tree files. These are used to describe the
+            non-discoverable hardware of a system.
+          '';
+        };
+
+        base = mkOption {
+          default = "${config.boot.kernelPackages.kernel}/dtbs";
+          defaultText = "\${config.boot.kernelPackages.kernel}/dtbs";
+          example = literalExample "pkgs.deviceTree_rpi";
+          type = types.path;
+          description = ''
+            The package containing the base device-tree (.dtb) to boot. Contains
+            device trees bundled with the Linux kernel by default.
+          '';
+        };
+
+        overlays = mkOption {
+          default = [];
+          example = literalExample
+            "[\"\${pkgs.deviceTree_rpi.overlays}/w1-gpio.dtbo\"]";
+          type = types.listOf types.path;
+          description = ''
+            A path containing device tree overlays (.dtbo) to be applied to all
+            base device-trees.
+          '';
+        };
+
+        package = mkOption {
+          default = null;
+          type = types.nullOr types.path;
+          internal = true;
+          description = ''
+            A path containing the result of applying `overlays` to `base`.
+          '';
+        };
+      };
+  };
+
+  config = mkIf (cfg.enable) {
+    hardware.deviceTree.package = if (cfg.overlays != [])
+      then pkgs.deviceTree.applyOverlays cfg.base cfg.overlays else cfg.base;
+  };
+}

nixos/modules/installer/cd-dvd/installation-cd-graphical-base.nix

@@ -8,16 +8,30 @@ with lib;
 {
   imports = [ ./installation-cd-base.nix ];
 
+  # Whitelist wheel users to do anything
+  # This is useful for things like pkexec
+  #
+  # WARNING: this is dangerous for systems
+  # outside the installation-cd and shouldn't
+  # be used anywhere else.
+  security.polkit.extraConfig = ''
+    polkit.addRule(function(action, subject) {
+      if (subject.isInGroup("wheel")) {
+        return polkit.Result.YES;
+      }
+    });
+  '';
+
   services.xserver = {
     enable = true;
 
     # Don't start the X server by default.
     autorun = mkForce false;
 
-    # Automatically login as root.
+    # Automatically login as nixos.
     displayManager.slim = {
       enable = true;
-      defaultUser = "root";
+      defaultUser = "nixos";
       autoLogin = true;
     };
 
@@ -33,7 +47,6 @@ with lib;
 
   # Enable sound in graphical iso's.
   hardware.pulseaudio.enable = true;
-  hardware.pulseaudio.systemWide = true; # Needed since we run plasma as root.
 
   environment.systemPackages = [
     # Include gparted for partitioning disks.

nixos/modules/installer/cd-dvd/installation-cd-graphical-kde.nix

@@ -1,5 +1,5 @@
 # This module defines a NixOS installation CD that contains X11 and
-# Plasma5.
+# Plasma 5.
 
 { config, lib, pkgs, ... }:
 
@@ -30,15 +30,20 @@ with lib;
       Version=1.0
       Type=Application
       Name=NixOS Manual
-      Exec=firefox ${config.system.build.manual.manualHTMLIndex}
+      Exec=firefox ${config.system.build.manual.manual}/share/doc/nixos/index.html
       Icon=text-html
     '';
 
+    homeDir = "/home/nixos/";
+    desktopDir = homeDir + "Desktop/";
+
   in ''
-    mkdir -p /root/Desktop
-    ln -sfT ${manualDesktopFile} /root/Desktop/nixos-manual.desktop
-    ln -sfT ${pkgs.konsole}/share/applications/org.kde.konsole.desktop /root/Desktop/org.kde.konsole.desktop
-    ln -sfT ${pkgs.gparted}/share/applications/gparted.desktop /root/Desktop/gparted.desktop
+    mkdir -p ${desktopDir}
+    chown nixos ${homeDir} ${desktopDir}
+
+    ln -sfT ${manualDesktopFile} ${desktopDir + "nixos-manual.desktop"}
+    ln -sfT ${pkgs.gparted}/share/applications/gparted.desktop ${desktopDir + "gparted.desktop"}
+    ln -sfT ${pkgs.konsole}/share/applications/org.kde.konsole.desktop ${desktopDir + "org.kde.konsole.desktop"}
   '';
 
 }

nixos/modules/installer/tools/nixos-enter.sh

@@ -16,7 +16,8 @@ fi
 
 mountPoint=/mnt
 system=/nix/var/nix/profiles/system
-command=($system/sw/bin/bash "--login")
+command=("$system/sw/bin/bash" "--login")
+silent=0
 
 while [ "$#" -gt 0 ]; do
     i="$1"; shift 1
@@ -32,9 +33,12 @@ while [ "$#" -gt 0 ]; do
             exit 1
             ;;
         --command|-c)
-            command=($system/sw/bin/bash "-c" "$1")
+            command=("$system/sw/bin/bash" "-c" "$1")
             shift 1
             ;;
+        --silent)
+            silent=1
+            ;;
         --)
             command=("$@")
             break
@@ -51,11 +55,20 @@ if [[ ! -e $mountPoint/etc/NIXOS ]]; then
     exit 126
 fi
 
-mkdir -m 0755 -p "$mountPoint/dev" "$mountPoint/sys"
+mkdir -p "$mountPoint/dev" "$mountPoint/sys"
+chmod 0755 "$mountPoint/dev" "$mountPoint/sys"
 mount --rbind /dev "$mountPoint/dev"
 mount --rbind /sys "$mountPoint/sys"
 
+# If silent, write both stdout and stderr of activation script to /dev/null
+# otherwise, write both streams to stderr of this process
+if [ "$silent" -eq 0 ]; then
+    PIPE_TARGET="/dev/stderr"
+else
+    PIPE_TARGET="/dev/null"
+fi
+
 # Run the activation script. Set $LOCALE_ARCHIVE to supress some Perl locale warnings.
-LOCALE_ARCHIVE=$system/sw/lib/locale/locale-archive chroot "$mountPoint" "$system/activate" >&2 || true
+LOCALE_ARCHIVE="$system/sw/lib/locale/locale-archive" chroot "$mountPoint" "$system/activate" >>$PIPE_TARGET 2>&1 || true
 
 exec chroot "$mountPoint" "${command[@]}"

nixos/modules/module-list.nix

@@ -46,6 +46,7 @@
   ./hardware/cpu/amd-microcode.nix
   ./hardware/cpu/intel-microcode.nix
   ./hardware/digitalbitbox.nix
+  ./hardware/device-tree.nix
   ./hardware/sensor/iio.nix
   ./hardware/ksm.nix
   ./hardware/ledger.nix
@@ -111,6 +112,7 @@
   ./programs/firejail.nix
   ./programs/fish.nix
   ./programs/freetds.nix
+  ./programs/fuse.nix
   ./programs/gnome-disks.nix
   ./programs/gnome-documents.nix
   ./programs/gpaste.nix

nixos/modules/profiles/hardened.nix

@@ -44,6 +44,9 @@ with lib;
 
     # Disable legacy virtual syscalls
     "vsyscall=none"
+
+    # Enable page allocator randomization
+    "page_alloc.shuffle=1"
   ];
 
   boot.blacklistedKernelModules = [
@@ -121,4 +124,7 @@ with lib;
   # Ignore outgoing ICMP redirects (this is ipv4 only)
   boot.kernel.sysctl."net.ipv4.conf.all.send_redirects" = mkDefault false;
   boot.kernel.sysctl."net.ipv4.conf.default.send_redirects" = mkDefault false;
+
+  # Restrict userfaultfd syscalls to processes with the SYS_PTRACE capability
+  boot.kernel.sysctl."vm.unprivileged_userfaultfd" = mkDefault false;
 }

nixos/modules/profiles/installation-device.nix

@@ -32,19 +32,35 @@ with lib;
     #services.rogue.enable = true;
 
     # Disable some other stuff we don't need.
-    security.sudo.enable = mkDefault false;
     services.udisks2.enable = mkDefault false;
 
+    # Use less privileged nixos user
+    users.users.nixos = {
+      isNormalUser = true;
+      extraGroups = [ "wheel" "networkmanager" "video" ];
+      # Allow the graphical user to login without password
+      initialHashedPassword = "";
+    };
+
+    # Allow the user to log in as root without a password.
+    users.users.root.initialHashedPassword = "";
+
+    # Allow passwordless sudo from nixos user
+    security.sudo = {
+      enable = mkDefault true;
+      wheelNeedsPassword = mkForce false;
+    };
+
     # Automatically log in at the virtual consoles.
-    services.mingetty.autologinUser = "root";
+    services.mingetty.autologinUser = "nixos";
 
     # Some more help text.
     services.mingetty.helpLine =
       ''
 
-        The "root" account has an empty password.  ${
+        The "nixos" and "root" account have empty passwords.  ${
           optionalString config.services.xserver.enable
-            "Type `systemctl start display-manager' to\nstart the graphical user interface."}
+            "Type `sudo systemctl start display-manager' to\nstart the graphical user interface."}
       '';
 
     # Allow sshd to be started manually through "systemctl start sshd".
@@ -86,8 +102,5 @@ with lib;
     # because we have the firewall enabled. This makes installs from the
     # console less cumbersome if the machine has a public IP.
     networking.firewall.logRefusedConnections = mkDefault false;
-
-    # Allow the user to log in as root without a password.
-    users.users.root.initialHashedPassword = "";
   };
 }

nixos/modules/programs/fuse.nix

@@ -0,0 +1,37 @@
+{ config, lib, ... }:
+
+with lib;
+
+let
+  cfg = config.programs.fuse;
+in {
+  meta.maintainers = with maintainers; [ primeos ];
+
+  options.programs.fuse = {
+    mountMax = mkOption {
+      # In the C code it's an "int" (i.e. signed and at least 16 bit), but
+      # negative numbers obviously make no sense:
+      type = types.ints.between 0 32767; # 2^15 - 1
+      default = 1000;
+      description = ''
+        Set the maximum number of FUSE mounts allowed to non-root users.
+      '';
+    };
+
+    userAllowOther = mkOption {
+      type = types.bool;
+      default = false;
+      description = ''
+        Allow non-root users to specify the allow_other or allow_root mount
+        options, see mount.fuse3(8).
+      '';
+    };
+  };
+
+  config =  {
+    environment.etc."fuse.conf".text = ''
+      ${optionalString (!cfg.userAllowOther) "#"}user_allow_other
+      mount_max = ${toString cfg.mountMax}
+    '';
+  };
+}

nixos/modules/services/network-filesystems/ipfs.nix

@@ -208,9 +208,9 @@ in {
 
   config = mkIf cfg.enable {
     environment.systemPackages = [ wrapped ];
-    environment.etc."fuse.conf" = mkIf cfg.autoMount { text = ''
-      user_allow_other
-    ''; };
+    programs.fuse = mkIf cfg.autoMount {
+      userAllowOther = true;
+    };
 
     users.users = mkIf (cfg.user == "ipfs") {
       ipfs = {

nixos/modules/services/printing/cupsd.nix

@@ -127,7 +127,7 @@ in
 
       startWhenNeeded = mkOption {
         type = types.bool;
-        default = false;
+        default = true;
         description = ''
           If set, CUPS is socket-activated; that is,
           instead of having it permanently running as a daemon,
@@ -296,11 +296,16 @@ in
     # gets loaded, and then cups cannot access the printers.
     boot.blacklistedKernelModules = [ "usblp" ];
 
+    # Some programs like print-manager rely on this value to get
+    # printer test pages.
+    environment.sessionVariables.CUPS_DATADIR = "${bindir}/share/cups";
+
     systemd.packages = [ cups.out ];
 
     systemd.sockets.cups = mkIf cfg.startWhenNeeded {
       wantedBy = [ "sockets.target" ];
-      listenStreams = map (x: replaceStrings ["localhost"] ["127.0.0.1"] (removePrefix "*:" x)) cfg.listenAddresses;
+      listenStreams = [ "/run/cups/cups.sock" ]
+        ++ map (x: replaceStrings ["localhost"] ["127.0.0.1"] (removePrefix "*:" x)) cfg.listenAddresses;
     };
 
     systemd.services.cups =
@@ -362,10 +367,10 @@ in
       { description = "CUPS Remote Printer Discovery";
 
         wantedBy = [ "multi-user.target" ];
-        wants = [ "cups.service" "avahi-daemon.service" ];
-        bindsTo = [ "cups.service" "avahi-daemon.service" ];
-        partOf = [ "cups.service" "avahi-daemon.service" ];
-        after = [ "cups.service" "avahi-daemon.service" ];
+        wants = [ "avahi-daemon.service" ] ++ optional (!cfg.startWhenNeeded) "cups.service";
+        bindsTo = [ "avahi-daemon.service" ] ++ optional (!cfg.startWhenNeeded) "cups.service";
+        partOf = [ "avahi-daemon.service" ] ++ optional (!cfg.startWhenNeeded) "cups.service";
+        after = [ "avahi-daemon.service" ] ++ optional (!cfg.startWhenNeeded) "cups.service";
 
         path = [ cups ];
 
@@ -421,4 +426,7 @@ in
     security.pam.services.cups = {};
 
   };
+
+  meta.maintainers = with lib.maintainers; [ matthewbauer ];
+
 }

nixos/modules/services/x11/desktop-managers/gnome3.nix

@@ -15,12 +15,16 @@ let
     '';
   };
 
-  nixos-gsettings-desktop-schemas = pkgs.runCommand "nixos-gsettings-desktop-schemas" { preferLocalBuild = true; }
+  nixos-gsettings-desktop-schemas = let
+    defaultPackages = with pkgs; [ gsettings-desktop-schemas gnome3.gnome-shell ];
+  in
+  pkgs.runCommand "nixos-gsettings-desktop-schemas" { preferLocalBuild = true; }
     ''
      mkdir -p $out/share/gsettings-schemas/nixos-gsettings-overrides/glib-2.0/schemas
-     cp -rf ${pkgs.gsettings-desktop-schemas}/share/gsettings-schemas/gsettings-desktop-schemas*/glib-2.0/schemas/*.xml $out/share/gsettings-schemas/nixos-gsettings-overrides/glib-2.0/schemas
 
-     ${concatMapStrings (pkg: "cp -rf ${pkg}/share/gsettings-schemas/*/glib-2.0/schemas/*.xml $out/share/gsettings-schemas/nixos-gsettings-overrides/glib-2.0/schemas\n") cfg.extraGSettingsOverridePackages}
+     ${concatMapStrings
+        (pkg: "cp -rf ${pkg}/share/gsettings-schemas/*/glib-2.0/schemas/*.xml $out/share/gsettings-schemas/nixos-gsettings-overrides/glib-2.0/schemas\n")
+        (defaultPackages ++ cfg.extraGSettingsOverridePackages)}
 
      chmod -R a+w $out/share/gsettings-schemas/nixos-gsettings-overrides
      cat - > $out/share/gsettings-schemas/nixos-gsettings-overrides/glib-2.0/schemas/nixos-defaults.gschema.override <<- EOF
@@ -30,6 +34,9 @@ let
        [org.gnome.desktop.screensaver]
        picture-uri='${pkgs.nixos-artwork.wallpapers.simple-dark-gray-bottom}/share/artwork/gnome/nix-wallpaper-simple-dark-gray_bottom.png'
 
+       [org.gnome.shell]
+       favorite-apps=[ 'org.gnome.Epiphany.desktop', 'evolution.desktop', 'org.gnome.Music.desktop', 'org.gnome.Photos.desktop', 'org.gnome.Nautilus.desktop', 'org.gnome.Software.desktop' ]
+
        ${cfg.extraGSettingsOverrides}
      EOF
 

nixos/modules/services/x11/xserver.nix

@@ -714,7 +714,7 @@ in
       nativeBuildInputs = [ pkgs.xkbvalidate ];
       preferLocalBuild = true;
     } ''
-      validate "$xkbModel" "$layout" "$xkbVariant" "$xkbOptions"
+      xkbvalidate "$xkbModel" "$layout" "$xkbVariant" "$xkbOptions"
       touch "$out"
     '');
 

nixos/modules/system/activation/top-level.nix

@@ -46,8 +46,8 @@ let
 
         ln -s ${kernelPath} $out/kernel
         ln -s ${config.system.modulesTree} $out/kernel-modules
-        ${optionalString (pkgs.stdenv.hostPlatform.platform.kernelDTB or false) ''
-          ln -s ${config.boot.kernelPackages.kernel}/dtbs $out/dtbs
+        ${optionalString (config.hardware.deviceTree.package != null) ''
+          ln -s ${config.hardware.deviceTree.package} $out/dtbs
         ''}
 
         echo -n "$kernelParams" > $out/kernel-params

nixos/modules/system/boot/loader/generic-extlinux-compatible/extlinux-conf-builder.sh

@@ -75,9 +75,8 @@ addEntry() {
 
     copyToKernelsDir "$path/kernel"; kernel=$result
     copyToKernelsDir "$path/initrd"; initrd=$result
-    # XXX UGLY: maybe the system config should have a top-level "dtbs" entry?
-    dtbDir=$(readlink -m "$path/kernel/../dtbs")
-    if [ -d "$dtbDir" ]; then
+    dtbDir=$(readlink -m "$path/dtbs")
+    if [ -e "$dtbDir" ]; then
         copyToKernelsDir "$dtbDir"; dtbs=$result
     fi
 

nixos/modules/system/boot/networkd.nix

@@ -10,7 +10,7 @@ let
 
   checkLink = checkUnitConfig "Link" [
     (assertOnlyFields [
-      "Description" "Alias" "MACAddressPolicy" "MACAddress" "NamePolicy" "Name"
+      "Description" "Alias" "MACAddressPolicy" "MACAddress" "NamePolicy" "OriginalName"
       "MTUBytes" "BitsPerSecond" "Duplex" "AutoNegotiation" "WakeOnLan" "Port"
       "TCPSegmentationOffload" "TCP6SegmentationOffload" "GenericSegmentationOffload"
       "GenericReceiveOffload" "LargeReceiveOffload" "RxChannels" "TxChannels"

nixos/modules/virtualisation/amazon-image.nix

@@ -35,10 +35,9 @@ in
       autoResize = true;
     };
 
-    boot.extraModulePackages =
-      [ config.boot.kernelPackages.ixgbevf
-        config.boot.kernelPackages.ena
-      ];
+    boot.extraModulePackages = [
+      config.boot.kernelPackages.ena
+    ];
     boot.initrd.kernelModules = [ "xen-blkfront" "xen-netfront" ];
     boot.initrd.availableKernelModules = [ "ixgbevf" "ena" "nvme" ];
     boot.kernelParams = mkIf cfg.hvm [ "console=ttyS0" ];

nixos/tests/printing.nix

@@ -3,7 +3,7 @@
 import ./make-test.nix ({pkgs, ... }: {
   name = "printing";
   meta = with pkgs.stdenv.lib.maintainers; {
-    maintainers = [ domenkozar eelco ];
+    maintainers = [ domenkozar eelco matthewbauer ];
   };
 
   nodes = {
@@ -34,10 +34,6 @@ import ./make-test.nix ({pkgs, ... }: {
     ''
       startAll;
 
-      # Make sure that cups is up on both sides.
-      $server->waitForUnit("cups.service");
-      $client->waitForUnit("cups.service");
-      $client->sleep(10); # wait until cups is fully initialized
       $client->succeed("lpstat -r") =~ /scheduler is running/ or die;
       # check local encrypted connections work without error
       $client->succeed("lpstat -E -r") =~ /scheduler is running/ or die;

pkgs/applications/altcoins/bitcoin.nix

@@ -5,13 +5,13 @@
 with stdenv.lib;
 stdenv.mkDerivation rec{
   name = "bitcoin" + (toString (optional (!withGui) "d")) + "-" + version;
-  version = "0.18.0";
+  version = "0.18.1";
 
   src = fetchurl {
     urls = [ "https://bitcoincore.org/bin/bitcoin-core-${version}/bitcoin-${version}.tar.gz"
              "https://bitcoin.org/bin/bitcoin-core-${version}/bitcoin-${version}.tar.gz"
            ];
-    sha256 = "5e4e6890e07b620a93fdb24605dae2bb53e8435b2a93d37558e1db1913df405f";
+    sha256 = "5c7d93f15579e37aa2d1dc79e8f5ac675f59045fceddf604ae0f1550eb03bf96";
   };
 
   nativeBuildInputs =

pkgs/applications/audio/fmit/default.nix

@@ -1,4 +1,4 @@
-{ stdenv, fetchFromGitHub, fftw, qtbase, qtmultimedia, qmake
+{ stdenv, mkDerivation, fetchFromGitHub, fftw, qtbase, qtmultimedia, qmake, itstool, wrapQtAppsHook
 , alsaSupport ? true, alsaLib ? null
 , jackSupport ? false, libjack2 ? null
 , portaudioSupport ? false, portaudio ? null }:
@@ -9,18 +9,18 @@ assert portaudioSupport -> portaudio != null;
 
 with stdenv.lib;
 
-stdenv.mkDerivation rec {
+mkDerivation rec {
   pname = "fmit";
-  version = "1.1.14";
+  version = "1.2.6";
 
   src = fetchFromGitHub {
-    sha256 = "18gvl8smcnigzldy1acs5h8rscf287b39xi4y2cl5armqbj0y38x";
-    rev = "v${version}";
-    repo = "fmit";
     owner = "gillesdegottex";
+    repo = "fmit";
+    rev = "v${version}";
+    sha256 = "03nzkig5mw2rqwhwmg0qvc5cnk9bwh2wp13jh0mdrr935w0587mz";
   };
 
-  nativeBuildInputs = [ qmake ];
+  nativeBuildInputs = [ qmake itstool wrapQtAppsHook ];
   buildInputs = [ fftw qtbase qtmultimedia ]
     ++ optionals alsaSupport [ alsaLib ]
     ++ optionals jackSupport [ libjack2 ]

pkgs/applications/audio/lollypop/default.nix

@@ -15,13 +15,12 @@
 , gobject-introspection
 , wrapGAppsHook
 , lastFMSupport ? true
-, wikipediaSupport ? true
-, youtubeSupport ? true, youtube-dl
+, youtubeSupport ? true
 }:
 
 python3.pkgs.buildPythonApplication rec  {
   pname = "lollypop";
-  version = "1.1.4.2";
+  version = "1.1.4.14";
 
   format = "other";
   doCheck = false;
@@ -30,7 +29,7 @@ python3.pkgs.buildPythonApplication rec  {
     url = "https://gitlab.gnome.org/World/lollypop";
     rev = "refs/tags/${version}";
     fetchSubmodules = true;
-    sha256 = "0rn3q7xslqq5hw4wb739ywg5dr99xpkbmyw80y84rsg0wfrwbjlc";
+    sha256 = "004cwbnxss6vmdsc6i0y83h3xbc2bzc0ra4z99pkizkky2mz6swj";
   };
 
   nativeBuildInputs = [
@@ -64,7 +63,6 @@ python3.pkgs.buildPythonApplication rec  {
     pygobject3
   ]
   ++ lib.optional lastFMSupport pylast
-  ++ lib.optional wikipediaSupport wikipedia
   ++ lib.optional youtubeSupport youtube-dl
   ;
 

pkgs/applications/audio/pamixer/default.nix

@@ -2,26 +2,19 @@
 
 stdenv.mkDerivation rec {
   pname = "pamixer";
-  version = "1.3.1";
+  version = "1.4";
 
   src = fetchFromGitHub {
     owner = "cdemoulins";
     repo = "pamixer";
     rev = version;
-    sha256 = "15zs2x4hnrpxphqn542b6qqm4ymvhkvbcfyffy69d6cki51chzzw";
+    sha256 = "1i14550n8paijwwnhksv5izgfqm3s5q2773bdfp6vyqybkll55f7";
   };
 
-  # Remove after https://github.com/cdemoulins/pamixer/pull/16 gets fixed
-  patches = [(fetchpatch {
-    url = "https://github.com/oxij/pamixer/commit/dea1cd967aa837940e5c0b04ef7ebc47a7a93d63.patch";
-    sha256 = "0s77xmsiwywyyp6f4bjxg1sqdgms1k5fiy7na6ws0aswshfnzfjb";
-  })];
-
   buildInputs = [ boost libpulseaudio ];
 
   installPhase = ''
-    mkdir -p $out/bin
-    cp pamixer $out/bin
+    install -Dm755 pamixer -t $out/bin
   '';
 
   meta = with stdenv.lib; {

pkgs/applications/editors/emacs-modes/melpa-packages.nix

@@ -73,6 +73,23 @@ env NIXPKGS_ALLOW_BROKEN=1 nix-instantiate --show-trace ../../../../ -A emacsPac
           propagatedUserEnvPkgs = old.propagatedUserEnvPkgs ++ [ external.elpy ];
         });
 
+        emacsql-sqlite = super.emacsql-sqlite.overrideAttrs(old: {
+          buildInputs = old.buildInputs ++ [ pkgs.sqlite ];
+
+          postBuild = ''
+            cd source/sqlite
+            make
+            cd -
+          '';
+
+          postInstall = ''
+            install -m=755 -D source/sqlite/emacsql-sqlite \
+              $out/share/emacs/site-lisp/elpa/emacsql-sqlite-${old.version}/sqlite/emacsql-sqlite
+          '';
+
+          stripDebugList = [ "share" ];
+        });
+
         evil-magit = super.evil-magit.overrideAttrs (attrs: {
           # searches for Git at build time
           nativeBuildInputs =

pkgs/applications/editors/rstudio/default.nix

@@ -46,7 +46,7 @@ stdenv.mkDerivation rec {
     sha256 = "19x000m3jwnkqgi6ic81lkzyjvvxcfacw2j0vcfcaknvvagzhyhb";
   };
 
-  hunspellDictionaries = with stdenv.lib; filter isDerivation (attrValues hunspellDicts);
+  hunspellDictionaries = with stdenv.lib; filter isDerivation (unique (attrValues hunspellDicts));
 
   mathJaxSrc = fetchurl {
     url = https://s3.amazonaws.com/rstudio-buildtools/mathjax-26.zip;

pkgs/applications/editors/vim/macvim.nix

@@ -27,13 +27,13 @@ in
 stdenv.mkDerivation rec {
   pname = "macvim";
 
-  version = "8.1.1517";
+  version = "8.1.1722";
 
   src = fetchFromGitHub {
     owner = "macvim-dev";
     repo = "macvim";
-    rev = "snapshot-156";
-    sha256 = "17plmqcn49gqwr1km77mkxflrg0f4sn06r3n0fbxa8zcz9zmb1q2";
+    rev = "snapshot-157";
+    sha256 = "1gmgc4pwaqy78gj4p7iib94n7j52ir0aa03ks595h3vy1hkcwwky";
   };
 
   enableParallelBuilding = true;

pkgs/applications/graphics/drawio/default.nix

@@ -11,11 +11,11 @@
 
 stdenv.mkDerivation rec {
   pname = "drawio";
-  version = "11.1.1";
+  version = "11.1.4";
 
   src = fetchurl {
     url = "https://github.com/jgraph/drawio-desktop/releases/download/v${version}/draw.io-x86_64-${version}.rpm";
-    sha256 = "1jibkxx00rma641c3xr7720qj9slqsvhbpi7nawi6f2f91gzyc10";
+    sha256 = "0ca8wkkdr7kbb8il84nq05qgd5ykjq15fdv9432wr5p9xmqixz1q";
   };
 
   nativeBuildInputs = [
@@ -70,18 +70,18 @@ stdenv.mkDerivation rec {
 
     # Application icon
     mkdir -p $out/share/icons/hicolor
-    cp -r usr/share/icons/hicolor/0x0 $out/share/icons/hicolor/1024x1024
+    cp -r usr/share/icons/hicolor/* $out/share/icons/hicolor/
 
     # XDG desktop item
     cp -r usr/share/applications $out/share/applications
 
     # Symlink wrapper
     mkdir -p $out/bin
-    ln -s $out/share/draw.io/draw.io $out/bin/draw.io
+    ln -s $out/share/draw.io/drawio $out/bin/drawio
 
     # Update binary path
-    substituteInPlace $out/share/applications/draw.io.desktop \
-      --replace /opt/draw.io/draw.io $out/bin/draw.io
+    substituteInPlace $out/share/applications/drawio.desktop \
+      --replace /opt/draw.io/drawio $out/bin/drawio
   '';
 
   meta = with stdenv.lib; {

pkgs/applications/misc/wtf/default.nix

@@ -1,20 +1,29 @@
-{ buildGoPackage
+{ buildGoModule
 , fetchFromGitHub
 , lib
 }:
 
-buildGoPackage rec {
+buildGoModule rec {
   pname = "wtf";
-  version = "0.17.1";
+  version = "0.19.1";
 
   src = fetchFromGitHub {
     owner = "wtfutil";
     repo = pname;
     rev = "v${version}";
-    sha256 = "1qiwl6z5rraspjqry8dwnx8fgl9vv70sn5kgvh8074vl651yjq8c";
+    sha256 = "19qzg5blqm5p7rrnaqh4f9aj53i743mawjnd1h9lfahbgmil1d24";
   };
 
-  goPackagePath = "github.com/wtfutil/wtf";
+  modSha256 = "1q21pc4yyiq4dihsb9n7261ssj52nnik8dq6fg4gvlnnpgcjp570";
+
+  # As per https://github.com/wtfutil/wtf/issues/501, one of the
+  # dependencies can't be fetched, so vendored dependencies should
+  # be used instead
+  modBuildPhase = ''
+    runHook preBuild
+    make build -mod=vendor
+    runHook postBuild
+  '';
 
   meta = with lib; {
     description = "The personal information dashboard for your terminal";

pkgs/applications/networking/browsers/chromium/common.nix

@@ -13,7 +13,7 @@
 , bison, gperf
 , glib, gtk3, dbus-glib
 , glibc
-, libXScrnSaver, libXcursor, libXtst, libGLU_combined
+, libXScrnSaver, libXcursor, libXtst, libGLU_combined, libGL
 , protobuf, speechd, libXdamage, cups
 , ffmpeg, libxslt, libxml2, at-spi2-core
 , jdk
@@ -309,6 +309,13 @@ let
       targets = extraAttrs.buildTargets or [];
       commands = map buildCommand targets;
     in concatStringsSep "\n" commands;
+
+    postFixup = ''
+      # Make sure that libGLESv2 is found by dlopen (if using EGL).
+      chromiumBinary="$libExecPath/$packageName"
+      origRpath="$(patchelf --print-rpath "$chromiumBinary")"
+      patchelf --set-rpath "${libGL}/lib:$origRpath" "$chromiumBinary"
+    '';
   };
 
 # Remove some extraAttrs we supplied to the base attributes already.

pkgs/applications/networking/browsers/firefox/packages.nix

@@ -17,10 +17,10 @@ rec {
 
   firefox = common rec {
     pname = "firefox";
-    ffversion = "68.0.1";
+    ffversion = "68.0.2";
     src = fetchurl {
       url = "mirror://mozilla/firefox/releases/${ffversion}/source/firefox-${ffversion}.source.tar.xz";
-      sha512 = "20rqfa5sdaagryk00iywnbap0bmhq1c74pfbxi3pq1cs52qs5nhjqn3xm6910zwcn5nw08i9qd5jkg5blvqrjzw780nh8qbrwsm3d4n";
+      sha512 = "2xzakpb6mp9hjqkim353afv059i4zfpmhflhv3l3qzajgjz36cacbmp4bkn4cghinm8krhp8z02264ww0bcraryjjwn5q0dzljrha2w";
     };
 
     patches = [
@@ -99,10 +99,10 @@ rec {
 
   firefox-esr-68 = common rec {
     pname = "firefox-esr";
-    ffversion = "68.0.1esr";
+    ffversion = "68.0.2esr";
     src = fetchurl {
       url = "mirror://mozilla/firefox/releases/${ffversion}/source/firefox-${ffversion}.source.tar.xz";
-      sha512 = "27ncapq18rdlrf0kp5r09spcqazi0g8nbzbfxijs9pi3cvlkayagi3fbbzzq5jkn0n3j580vadc6v1v3zibvdwb5s3c6bz559a7nra2";
+      sha512 = "0dyjayrbcq6dg8vmzbf7303aixnhpd6r777chxpdvqq892rgvw5q4f8yfb6pr8j978hahn4dz968vzmi6sp40y3hf62hnzdqpzd2bx1";
     };
 
     patches = [

pkgs/applications/networking/browsers/tor-browser-bundle-bin/default.nix

@@ -300,7 +300,8 @@ stdenv.mkDerivation rec {
 
     # Clear out some files that tend to capture store references but are
     # easily generated by firefox at startup.
-    rm -f "\$HOME/TorBrowser/Data/Browser/profile.default"/{compatibility.ini,extensions.ini,extensions.json}
+    rm -f "\$HOME/TorBrowser/Data/Browser/profile.default"/{addonStartup.json.lz4,compatibility.ini,extensions.ini,extensions.json}
+    rm -f "\$HOME/TorBrowser/Data/Browser/profile.default"/startupCache/*
 
     # XDG
     : "\''${XDG_RUNTIME_DIR:=/run/user/\$(id -u)}"

pkgs/applications/networking/browsers/vivaldi/default.nix

@@ -17,11 +17,11 @@ let
   vivaldiName = if isSnapshot then "vivaldi-snapshot" else "vivaldi";
 in stdenv.mkDerivation rec {
   pname = "vivaldi";
-  version = "2.6.1566.49-1";
+  version = "2.6.1566.51-1";
 
   src = fetchurl {
     url = "https://downloads.vivaldi.com/${branch}/vivaldi-${branch}_${version}_amd64.deb";
-    sha256 = "1hl7aqq3i6mkkg7sdcax26kn08p8mqwlq4xpg4v05ivdvyh5ac9d";
+    sha256 = "0582f16saldgn482806f9igb97is4p3ayvh99j0wx9plxnyq5xmm";
   };
 
   unpackPhase = ''

pkgs/applications/networking/cluster/prow/13918-fix-go-sum.patch

@@ -0,0 +1,22 @@
+From b0ab95b9664916618ebf5fe637b1bc4de4ba9a6e Mon Sep 17 00:00:00 2001
+From: "Wael M. Nasreddine" <wael.nasreddine@gmail.com>
+Date: Wed, 14 Aug 2019 23:07:51 -0700
+Subject: [PATCH] fix the hash of gomodules.xyz/jsonpatch/v2
+
+---
+ go.sum | 2 +-
+ 1 file changed, 1 insertion(+), 1 deletion(-)
+
+diff --git a/go.sum b/go.sum
+index 6bb130b4d9b..b3f48a85d4a 100644
+--- a/go.sum
++++ b/go.sum
+@@ -452,7 +452,7 @@ golang.org/x/tools v0.0.0-20190312170243-e65039ee4138 h1:H3uGjxCR/6Ds0Mjgyp7LMK8
+ golang.org/x/tools v0.0.0-20190312170243-e65039ee4138/go.mod h1:LCzVGOaR6xXOjkQ3onu1FJEFr0SW1gC7cKk1uF8kGRs=
+ golang.org/x/tools v0.0.0-20190404132500-923d25813098 h1:MtqjsZmyGRgMmLUgxnmMJ6RYdvd2ib8ipiayHhqSxs4=
+ golang.org/x/tools v0.0.0-20190404132500-923d25813098/go.mod h1:LCzVGOaR6xXOjkQ3onu1FJEFr0SW1gC7cKk1uF8kGRs=
+-gomodules.xyz/jsonpatch/v2 v2.0.0 h1:lHNQverf0+Gm1TbSbVIDWVXOhZ2FpZopxRqpr2uIjs4=
++gomodules.xyz/jsonpatch/v2 v2.0.0 h1:OyHbl+7IOECpPKfVK42oFr6N7+Y2dR+Jsb/IiDV3hOo=
+ gomodules.xyz/jsonpatch/v2 v2.0.0/go.mod h1:IhYNNY4jnS53ZnfE4PAmpKtDpTCj1JFXc+3mwe7XcUU=
+ google.golang.org/api v0.0.0-20180910000450-7ca32eb868bf/go.mod h1:4mhQ8q/RsB7i+udVvVy5NUi08OU8ZlA0gRVgrF7VFY0=
+ google.golang.org/api v0.0.0-20181021000519-a2651947f503/go.mod h1:4mhQ8q/RsB7i+udVvVy5NUi08OU8ZlA0gRVgrF7VFY0=

pkgs/applications/networking/cluster/prow/default.nix

@@ -0,0 +1,71 @@
+{ buildGoModule, fetchFromGitHub, lib }:
+
+buildGoModule rec {
+  pname = "prow-unstable";
+  version = "2019-08-14";
+  rev = "35a7744f5737bbc1c4e1256a9c9c5ad135c650e4";
+
+  src = fetchFromGitHub {
+    inherit rev;
+
+    owner = "kubernetes";
+    repo = "test-infra";
+    sha256 = "07kdlzrj59xyaa73vlx4s50fpg0brrkb0h0cyjgx81a0hsc7s03k";
+  };
+
+  patches = [
+    # https://github.com/kubernetes/test-infra/pull/13918
+    ./13918-fix-go-sum.patch
+  ];
+
+  modSha256 = "06q1zvhm78k64aj475k1xl38h7nk83mysd0bja0wknja048ymgsq";
+
+  subPackages = [
+    "./prow/cmd/admission"
+    "./prow/cmd/artifact-uploader"
+    "./prow/cmd/branchprotector"
+    "./prow/cmd/build"
+    "./prow/cmd/checkconfig"
+    "./prow/cmd/clonerefs"
+    "./prow/cmd/config-bootstrapper"
+    "./prow/cmd/crier"
+    "./prow/cmd/deck"
+    "./prow/cmd/entrypoint"
+    "./prow/cmd/gcsupload"
+    "./prow/cmd/gerrit"
+    "./prow/cmd/hook"
+    "./prow/cmd/horologium"
+    "./prow/cmd/initupload"
+    "./prow/cmd/jenkins-operator"
+    "./prow/cmd/mkbuild-cluster"
+    "./prow/cmd/mkpj"
+    "./prow/cmd/mkpod"
+    "./prow/cmd/peribolos"
+    "./prow/cmd/phaino"
+    "./prow/cmd/phony"
+    "./prow/cmd/pipeline"
+    "./prow/cmd/plank"
+    "./prow/cmd/sidecar"
+    "./prow/cmd/sinker"
+    "./prow/cmd/status-reconciler"
+    "./prow/cmd/sub"
+    "./prow/cmd/tackle"
+    "./prow/cmd/tide"
+    "./prow/cmd/tot"
+  ];
+
+  meta = with lib; {
+    description = "Prow is a Kubernetes based CI/CD system";
+    longDescription = ''
+      Prow is a Kubernetes based CI/CD system. Jobs can be triggered by various
+      types of events and report their status to many different services. In
+      addition to job execution, Prow provides GitHub automation in the form of
+      policy enforcement, chat-ops via /foo style commands, and automatic PR
+      merging.
+    '';
+    homepage = "https://github.com/kubernetes/test-infra/tree/master/prow";
+    license = licenses.asl20;
+    maintainers = with maintainers; [ kalbasit ];
+    platforms = platforms.linux ++ platforms.darwin;
+  };
+}

pkgs/applications/networking/instant-messengers/signal-desktop/default.nix

@@ -57,11 +57,11 @@ let
 
 in stdenv.mkDerivation rec {
   pname = "signal-desktop";
-  version = "1.26.0";
+  version = "1.26.1";
 
   src = fetchurl {
     url = "https://updates.signal.org/desktop/apt/pool/main/s/signal-desktop/signal-desktop_${version}_amd64.deb";
-    sha256 = "17g5yxr6ydc4rlbqc3r3876jis1x7mw496skc098n4q4f0m2ih24";
+    sha256 = "1s48mgya1gvidk0fmm7pifhqj2k0dc9xdq3h5ifz9kivjp7h0z09";
   };
 
   phases = [ "unpackPhase" "installPhase" ];

pkgs/applications/science/chemistry/molden/default.nix

@@ -1,12 +1,12 @@
 { stdenv, fetchurl, which, gfortran, libGLU, xorg } :
 
 stdenv.mkDerivation rec {
-  version = "6.1";
+  version = "6.2";
   pname = "molden";
 
   src = fetchurl {
     url = "ftp://ftp.cmbi.ru.nl/pub/molgraph/molden/molden${version}.tar.gz";
-    sha256 = "0swbjnqlkwhy8lvjkbx8yklqj4zfphwdg6s3haawxi3dd65ij539";
+    sha256 = "01m5p7v5pz1fi77var50sp1bzlvdckwr6kn4wanvic2jmvgp9q5n";
   };
 
   nativeBuildInputs = [ which ];

pkgs/applications/science/math/calc/default.nix

@@ -15,7 +15,6 @@ stdenv.mkDerivation rec {
 
   patchPhase = ''
     substituteInPlace Makefile \
-      --replace 'all: check_include' 'all:' \
       --replace '-install_name ''${LIBDIR}/libcalc''${LIB_EXT_VERSION}' '-install_name ''${T}''${LIBDIR}/libcalc''${LIB_EXT_VERSION}' \
       --replace '-install_name ''${LIBDIR}/libcustcalc''${LIB_EXT_VERSION}' '-install_name ''${T}''${LIBDIR}/libcustcalc''${LIB_EXT_VERSION}'
   '';
@@ -25,7 +24,7 @@ stdenv.mkDerivation rec {
 
   makeFlags = [
     "T=$(out)"
-    "INCDIR=${lib.getDev stdenv.cc.libc}/include"
+    "INCDIR="
     "BINDIR=/bin"
     "LIBDIR=/lib"
     "CALC_SHAREDIR=/share/calc"

pkgs/applications/science/math/calculix/calculix.patch

@@ -0,0 +1,31 @@
+diff --git a/ccx_2.15/src/Makefile b/ccx_2.15/src/Makefile
+index 9cab2fc..6e977b8 100755
+--- a/ccx_2.15/src/Makefile
++++ b/ccx_2.15/src/Makefile
+@@ -1,6 +1,6 @@
+ 
+ CFLAGS = -Wall -O3  -I ../../../SPOOLES.2.2 -DARCH="Linux" -DSPOOLES -DARPACK -DMATRIXSTORAGE -DNETWORKOUT
+-FFLAGS = -Wall -O3 
++FFLAGS = -Wall -O3
+ 
+ CC=cc
+ FC=gfortran
+@@ -18,15 +18,10 @@ OCCXF = $(SCCXF:.f=.o)
+ OCCXC = $(SCCXC:.c=.o)
+ OCCXMAIN = $(SCCXMAIN:.c=.o)
+ 
+-DIR=../../../SPOOLES.2.2
++LIBS = -lpthread -lm -lc -lspooles -larpack -lopenblas
+ 
+-LIBS = \
+-       $(DIR)/spooles.a \
+-	../../../ARPACK/libarpack_INTEL.a \
+-       -lpthread -lm -lc
+-
+-ccx_2.15: $(OCCXMAIN) ccx_2.15.a  $(LIBS)
+-	./date.pl; $(CC) $(CFLAGS) -c ccx_2.15.c; $(FC)  -Wall -O3 -o $@ $(OCCXMAIN) ccx_2.15.a $(LIBS)
++ccx_2.15: $(OCCXMAIN) ccx_2.15.a
++	$(CC) $(CFLAGS) -c ccx_2.15.c; $(FC)  -Wall -O3 -o $@ $(OCCXMAIN) ccx_2.15.a $(LIBS)
+ 
+ ccx_2.15.a: $(OCCXF) $(OCCXC)
+ 	ar vr $@ $?

pkgs/applications/science/math/calculix/default.nix

@@ -0,0 +1,39 @@
+{ stdenv, fetchurl, gfortran, arpack, spooles, openblas }:
+
+stdenv.mkDerivation rec {
+  pname = "calculix";
+  version = "2.15";
+
+  src = fetchurl {
+    url = "http://www.dhondt.de/ccx_${version}.src.tar.bz2";
+    sha256 = "0d4axfxgm3ag4p2vx9rjcky7c122k99a2nhv1jv53brm35rblzdw";
+  };
+
+  nativeBuildInputs = [ gfortran ];
+
+  buildInputs = [ arpack spooles openblas ];
+
+  NIX_CFLAGS_COMPILE = [
+    "-I${spooles}/include/spooles"
+  ];
+
+  patches = [
+    ./calculix.patch
+  ];
+
+  postPatch = ''
+    cd ccx*/src
+  '';
+
+  installPhase = ''
+    install -Dm0755 ccx_${version} $out/bin/ccx
+  '';
+
+  meta = with stdenv.lib; {
+    homepage = "http://www.calculix.de/";
+    description = "Three-dimensional structural finite element program";
+    license = licenses.gpl2Plus;
+    maintainers = with maintainers; [ gebner ];
+    platforms = platforms.unix;
+  };
+}

pkgs/applications/science/math/gmsh/default.nix

@@ -1,10 +1,9 @@
 { stdenv, fetchurl, cmake, openblasCompat, gfortran, gmm, fltk, libjpeg
-, zlib, libGLU_combined, libGLU, xorg }:
+, zlib, libGLU_combined, libGLU, xorg, opencascade-occt }:
 
-let version = "4.4.1"; in
-
-stdenv.mkDerivation {
-  name = "gmsh-${version}";
+stdenv.mkDerivation rec {
+  pname = "gmsh";
+  version = "4.4.1";
 
   src = fetchurl {
     url = "http://gmsh.info/src/gmsh-${version}-source.tgz";
@@ -14,15 +13,14 @@ stdenv.mkDerivation {
   buildInputs = [ openblasCompat gmm fltk libjpeg zlib libGLU_combined
     libGLU xorg.libXrender xorg.libXcursor xorg.libXfixes xorg.libXext
     xorg.libXft xorg.libXinerama xorg.libX11 xorg.libSM xorg.libICE
+    opencascade-occt
   ];
 
   nativeBuildInputs = [ cmake gfortran ];
 
-  enableParallelBuilding = true;
-
   meta = {
     description = "A three-dimensional finite element mesh generator";
-    homepage = http://gmsh.info/;
+    homepage = "http://gmsh.info/";
     platforms = [ "x86_64-linux" ];
     license = stdenv.lib.licenses.gpl2Plus;
   };

pkgs/applications/science/math/sage/dist-tests.nix

@@ -0,0 +1,17 @@
+# Lists past failures and files associated with it. The intention is to build
+# up a subset of a testsuite that catches 95% of failures that are relevant for
+# distributions while only taking ~5m to run. This in turn makes it more
+# reasonable to re-test sage on dependency changes and makes it easier for
+# users to override the sage derivation.
+# This is an experiment for now. If it turns out that there really is a small
+# subset of files responsible for the vast majority of packaging tests, we can
+# think about moving this upstream.
+[
+	"src/sage/env.py" # [1]
+	"src/sage/misc/persist.pyx" # [1]
+	"src/sage/misc/inline_fortran.py" # [1]
+	"src/sage/repl/ipython_extension.py" # [1]
+]
+
+# Numbered list of past failures to annotate files with
+# [1] PYTHONPATH related issue https://github.com/NixOS/nixpkgs/commit/ec7f569211091282410050e89e68832d4fe60528

pkgs/applications/science/math/sage/patches/configurationpy-error-verbose.patch

@@ -0,0 +1,19 @@
+diff --git a/src/sage/repl/configuration.py b/src/sage/repl/configuration.py
+index 67d7d2accf..18279581e2 100644
+--- a/src/sage/repl/configuration.py
++++ b/src/sage/repl/configuration.py
+@@ -9,10 +9,11 @@ the IPython simple prompt is being used::
+     sage: cmd = 'print([sys.stdin.isatty(), sys.stdout.isatty()])'
+     sage: import pexpect
+     sage: output = pexpect.run(
+-    ....:     'bash -c \'echo "{0}" | sage\''.format(cmd),
++    ....:     'bash -c \'export SAGE_BANNER=no; echo "{0}" | sage\''.format(cmd),
+     ....: ).decode('utf-8', 'surrogateescape')
+-    sage: 'sage: [False, True]' in output
+-    True
++    sage: print(output)
++    sage...[False, True]
++    sage...Exiting Sage ...
+ """
+ 
+ #*****************************************************************************

pkgs/applications/science/math/sage/sage-src.nix

@@ -61,7 +61,11 @@ stdenv.mkDerivation rec {
   # Since sage unfortunately does not release bugfix releases, packagers must
   # fix those bugs themselves. This is for critical bugfixes, where "critical"
   # == "causes (transient) doctest failures / somebody complained".
-  bugfixPatches = [ ];
+  bugfixPatches = [
+    # To help debug the transient error in
+    # https://trac.sagemath.org/ticket/23087 when it next occurs.
+    ./patches/configurationpy-error-verbose.patch
+  ];
 
   # Patches needed because of package updates. We could just pin the versions of
   # dependencies, but that would lead to rebuilds, confusion and the burdons of

pkgs/applications/science/math/sage/sage-tests.nix

@@ -51,6 +51,10 @@ stdenv.mkDerivation rec {
     export HOME="$TMPDIR/sage-home"
     mkdir -p "$HOME"
 
+    # avoid running out of memory with many threads in subprocesses, see
+    # https://github.com/NixOS/nixpkgs/pull/65802
+    export GLIBC_TUNABLES=glibc.malloc.arena_max=4
+
     echo "Running sage tests with arguments ${timeSpecifier} ${patienceSpecifier} ${testArgs}"
     "sage" -t --nthreads "$NIX_BUILD_CORES" --optional=sage ${timeSpecifier} ${patienceSpecifier} ${testArgs}
   '';

pkgs/applications/version-management/gitea/default.nix

@@ -8,13 +8,13 @@ with stdenv.lib;
 
 buildGoPackage rec {
   pname = "gitea";
-  version = "1.9.0";
+  version = "1.9.1";
 
   src = fetchFromGitHub {
     owner = "go-gitea";
     repo = "gitea";
     rev = "v${version}";
-    sha256 = "1z7rkhxkymv7rgc7blh9ps5sqrgl4sryf0rqcp16nh9n5snfm1rm";
+    sha256 = "0sk877rp6zhch1b9c7zbmk8pnlyqjp4nws2gzq24qvw5f4chlprw";
     # Required to generate the same checksum on MacOS due to unicode encoding differences
     # More information: https://github.com/NixOS/nixpkgs/pull/48128
     extraPostFetch = ''

pkgs/applications/version-management/smartgithg/default.nix

@@ -13,11 +13,11 @@
 
 stdenv.mkDerivation rec {
   pname = "smartgithg";
-  version = "18.2.9";
+  version = "19.1.1";
 
   src = fetchurl {
     url = "https://www.syntevo.com/downloads/smartgit/smartgit-linux-${builtins.replaceStrings [ "." ] [ "_" ] version}.tar.gz";
-    sha256 = "0d08awb2s3w1w8n8048abw2x4wnqhfx96sls9kdsnxj0xrszgz67";
+    sha256 = "0i0dvyy9d63f4hk8czlyk83ai0ywhqp7wbdkq3s87l7irwgs42jy";
   };
 
   nativeBuildInputs = [ wrapGAppsHook ];

pkgs/applications/version-management/sourcehut/builds.nix

@@ -0,0 +1,60 @@
+{ stdenv, fetchgit, buildPythonPackage
+, python
+, buildGoModule
+, srht, redis, celery, pyyaml, markdown }:
+
+let
+  version = "0.45.13";
+
+  buildWorker = src: buildGoModule {
+    inherit src version;
+    pname = "builds-sr-ht-worker";
+    goPackagePath = "git.sr.ht/~sircmpwn/builds.sr.ht/worker";
+
+    modSha256 = "1jm259ncw8dgqp0fqbjn30c4y3v3vwqj41gfh99jx30bwlmpgfax";
+  };
+in buildPythonPackage rec {
+  inherit version;
+  pname = "buildsrht";
+
+  src = fetchgit {
+    url = "https://git.sr.ht/~sircmpwn/builds.sr.ht";
+    rev = version;
+    sha256 = "002pcj2a98gbmv77a10449w1q6iqhqjz4fim8hm4qm7vn6bwp0hz";
+  };
+
+  patches = [
+    ./use-srht-path.patch
+  ];
+
+  nativeBuildInputs = srht.nativeBuildInputs;
+
+  propagatedBuildInputs = [
+    srht
+    redis
+    celery
+    pyyaml
+    markdown
+  ];
+
+  preBuild = ''
+    export PKGVER=${version}
+    export SRHT_PATH=${srht}/${python.sitePackages}/srht
+  '';
+
+  postInstall = ''
+    mkdir -p $out/lib
+    mkdir -p $out/bin/builds.sr.ht
+
+    cp -r images $out/lib
+    cp contrib/submit_image_build $out/bin/builds.sr.ht
+    cp ${buildWorker "${src}/worker"}/bin/worker $out/bin/builds.sr.ht-worker
+  '';
+
+  meta = with stdenv.lib; {
+    homepage = https://git.sr.ht/~sircmpwn/builds.sr.ht;
+    description = "Continuous integration service for the sr.ht network";
+    license = licenses.agpl3;
+    maintainers = with maintainers; [ eadwu ];
+  };
+}

pkgs/applications/version-management/sourcehut/core.nix

@@ -0,0 +1,80 @@
+{ stdenv, fetchgit, fetchNodeModules, buildPythonPackage
+, pgpy, flask, bleach, misaka, humanize, markdown, psycopg2, pygments, requests
+, sqlalchemy, flask_login, beautifulsoup4, sqlalchemy-utils, celery, alembic
+, sassc, nodejs-11_x
+, writeText }:
+
+buildPythonPackage rec {
+  pname = "srht";
+  version = "0.52.13";
+
+  src = fetchgit {
+    url = "https://git.sr.ht/~sircmpwn/core.sr.ht";
+    rev = version;
+    sha256 = "0i7gd2rkq4y4lffxsgb3mql9ddmk3vqckan29w266imrqs6p8c0z";
+  };
+
+  node_modules = fetchNodeModules {
+    src = "${src}/srht";
+    nodejs = nodejs-11_x;
+    sha256 = "0axl50swhcw8llq8z2icwr4nkr5qsw2riih0a040f9wx4xiw4p6p";
+  };
+
+  patches = [
+    ./disable-npm-install.patch
+  ];
+
+  nativeBuildInputs = [
+    sassc
+    nodejs-11_x
+  ];
+
+  propagatedBuildInputs = [
+    pgpy
+    flask
+    bleach
+    misaka
+    humanize
+    markdown
+    psycopg2
+    pygments
+    requests
+    sqlalchemy
+    flask_login
+    beautifulsoup4
+    sqlalchemy-utils
+
+    # Unofficial runtime dependencies?
+    celery
+    alembic
+  ];
+
+  PKGVER = version;
+
+  preBuild = ''
+    cp -r ${node_modules} srht/node_modules
+  '';
+
+  # No actual? tests but seems like it needs this anyway
+  preCheck = let
+    config = writeText "config.ini" ''
+      [webhooks]
+      private-key=K6JupPpnr0HnBjelKTQUSm3Ro9SgzEA2T2Zv472OvzI=
+
+      [meta.sr.ht]
+      origin=http://meta.sr.ht.local
+    '';
+  in ''
+    # Validation needs config option(s)
+    # webhooks <- ( private-key )
+    # meta.sr.ht <- ( origin )
+    cp ${config} config.ini
+  '';
+
+  meta = with stdenv.lib; {
+    homepage = https://git.sr.ht/~sircmpwn/srht;
+    description = "Core modules for sr.ht";
+    license = licenses.bsd3;
+    maintainers = with maintainers; [ eadwu ];
+  };
+}

pkgs/applications/version-management/sourcehut/default.nix

@@ -0,0 +1,49 @@
+{ python37, openssl_1_1
+, callPackage }:
+
+# To expose the *srht modules, they have to be a python module so we use `buildPythonModule`
+# Then we expose them through all-packages.nix as an application through `toPythonApplication`
+# https://github.com/NixOS/nixpkgs/pull/54425#discussion_r250688781
+
+let
+  fetchNodeModules = callPackage ../../networking/instant-messengers/rambox/fetchNodeModules.nix { };
+
+  python = python37.override {
+    packageOverrides = self: super: {
+      srht = self.callPackage ./core.nix { inherit fetchNodeModules; };
+
+      buildsrht = self.callPackage ./builds.nix { };
+      dispatchsrht = self.callPackage ./dispatch.nix { };
+      gitsrht = self.callPackage ./git.nix { };
+      hgsrht = self.callPackage ./hg.nix { };
+      listssrht = self.callPackage ./lists.nix { };
+      mansrht = self.callPackage ./man.nix { };
+      metasrht = self.callPackage ./meta.nix { };
+      pastesrht = self.callPackage ./paste.nix { };
+      todosrht = self.callPackage ./todo.nix { };
+
+      scmsrht = self.callPackage ./scm.nix { };
+
+      # OVERRIDES
+
+      cryptography = super.cryptography.override {
+        openssl = openssl_1_1;
+      };
+
+      pyopenssl = super.pyopenssl.override {
+        openssl = openssl_1_1;
+      };
+    };
+  };
+in with python.pkgs; {
+  inherit python;
+  buildsrht = toPythonApplication buildsrht;
+  dispatchsrht = toPythonApplication dispatchsrht;
+  gitsrht = toPythonApplication gitsrht;
+  hgsrht = toPythonApplication hgsrht;
+  listssrht = toPythonApplication listssrht;
+  mansrht = toPythonApplication mansrht;
+  metasrht = toPythonApplication metasrht;
+  pastesrht = toPythonApplication pastesrht;
+  todosrht = toPythonApplication todosrht;
+}

pkgs/applications/version-management/sourcehut/disable-npm-install.patch

@@ -0,0 +1,14 @@
+diff --git a/setup.py b/setup.py
+index d63bac8..e1d0c35 100755
+--- a/setup.py
++++ b/setup.py
+@@ -5,9 +5,6 @@ import glob
+ import os
+ import sys
+ 
+-if subprocess.call(["npm", "i"], cwd="srht") != 0:
+-    sys.exit(1)
+-
+ ver = os.environ.get("PKGVER") or subprocess.run(['git', 'describe', '--tags'],
+       stdout=subprocess.PIPE).stdout.decode().strip()
+ 

pkgs/applications/version-management/sourcehut/dispatch.nix

@@ -0,0 +1,39 @@
+{ stdenv, fetchgit, buildPythonPackage
+, python
+, srht, pyyaml, PyGithub, cryptography }:
+
+buildPythonPackage rec {
+  pname = "dispatchsrht";
+  version = "0.11.0";
+
+  src = fetchgit {
+    url = "https://git.sr.ht/~sircmpwn/dispatch.sr.ht";
+    rev = version;
+    sha256 = "1kahl2gy5a5li79djwkzkglkw2s7pl4d29bzqp8c53r0xvx4sqkz";
+  };
+
+  patches = [
+    ./use-srht-path.patch
+  ];
+
+  nativeBuildInputs = srht.nativeBuildInputs;
+
+  propagatedBuildInputs = [
+    srht
+    pyyaml
+    PyGithub
+    cryptography
+  ];
+
+  preBuild = ''
+    export PKGVER=${version}
+    export SRHT_PATH=${srht}/${python.sitePackages}/srht
+  '';
+
+  meta = with stdenv.lib; {
+    homepage = https://dispatch.sr.ht/~sircmpwn/dispatch.sr.ht;
+    description = "Task dispatcher and service integration tool for the sr.ht network";
+    license = licenses.agpl3;
+    maintainers = with maintainers; [ eadwu ];
+  };
+}

pkgs/applications/version-management/sourcehut/git.nix

@@ -0,0 +1,55 @@
+{ stdenv, fetchgit, buildPythonPackage
+, python
+, buildGoModule
+, srht, pygit2, scmsrht }:
+
+let
+  version = "0.32.3";
+
+  buildDispatcher = src: buildGoModule {
+    inherit src version;
+    pname = "git-sr-ht-dispatcher";
+    goPackagePath = "git.sr.ht/~sircmpwn/git.sr.ht/gitsrht-dispatch";
+
+    modSha256 = "1lmgmlin460g09dph2hw6yz25d4agqwjhrjv0qqsis7df9qpf3i1";
+  };
+in buildPythonPackage rec {
+  inherit version;
+  pname = "gitsrht";
+
+  src = fetchgit {
+    url = "https://git.sr.ht/~sircmpwn/git.sr.ht";
+    rev = version;
+    sha256 = "0grycmblhm9dnhcf1kcmn6bclgb9znahk2026dan58m9j9pja5vw";
+  };
+
+  patches = [
+    ./use-srht-path.patch
+  ];
+
+  nativeBuildInputs = srht.nativeBuildInputs;
+
+  propagatedBuildInputs = [
+    srht
+    pygit2
+    scmsrht
+  ];
+
+  preBuild = ''
+    export PKGVER=${version}
+    export SRHT_PATH=${srht}/${python.sitePackages}/srht
+  '';
+
+  # TODO: Remove redundant mkdir?
+  postInstall = ''
+    mkdir -p $out/bin
+    cp ${buildDispatcher "${src}/gitsrht-dispatch"}/bin/gitsrht-dispatch $out/bin/gitsrht-dispatch
+  '';
+
+  meta = with stdenv.lib; {
+    homepage = https://git.sr.ht/~sircmpwn/git.sr.ht;
+    description = "Git repository hosting service for the sr.ht network";
+    license = licenses.agpl3;
+    maintainers = with maintainers; [ eadwu ];
+  };
+}

pkgs/applications/version-management/sourcehut/hg.nix

@@ -0,0 +1,39 @@
+{ stdenv, fetchhg, buildPythonPackage
+, python
+, srht, hglib, scmsrht, unidiff }:
+
+buildPythonPackage rec {
+  pname = "hgsrht";
+  version = "0.13.0";
+
+  src = fetchhg {
+    url = "https://hg.sr.ht/~sircmpwn/hg.sr.ht";
+    rev = version;
+    sha256 = "0qkknvja0pyk69fvzqafj3x8hi5miw22nmksvifbrjcqph8jknqg";
+  };
+
+  patches = [
+    ./use-srht-path.patch
+  ];
+
+  nativeBuildInputs = srht.nativeBuildInputs;
+
+  propagatedBuildInputs = [
+    srht
+    hglib
+    scmsrht
+    unidiff
+  ];
+
+  preBuild = ''
+    export PKGVER=${version}
+    export SRHT_PATH=${srht}/${python.sitePackages}/srht
+  '';
+
+  meta = with stdenv.lib; {
+    homepage = https://git.sr.ht/~sircmpwn/hg.sr.ht;
+    description = "Mercurial repository hosting service for the sr.ht network";
+    license = licenses.agpl3;
+    maintainers = with maintainers; [ eadwu ];
+  };
+}

pkgs/applications/version-management/sourcehut/lists.nix

@@ -0,0 +1,40 @@
+{ stdenv, fetchgit, buildPythonPackage
+, python
+, srht, asyncpg, unidiff, aiosmtpd, emailthreads }:
+
+buildPythonPackage rec {
+  pname = "listssrht";
+  version = "0.36.3";
+
+  src = fetchgit {
+    url = "https://git.sr.ht/~sircmpwn/lists.sr.ht";
+    rev = version;
+    sha256 = "1q2z2pjwz4zifsrkxab9b9jh1vzayjqych1cx3i4859f1swl2gwa";
+  };
+
+  patches = [
+    ./use-srht-path.patch
+  ];
+
+  nativeBuildInputs = srht.nativeBuildInputs;
+
+  propagatedBuildInputs = [
+    srht
+    asyncpg
+    unidiff
+    aiosmtpd
+    emailthreads
+  ];
+
+  preBuild = ''
+    export PKGVER=${version}
+    export SRHT_PATH=${srht}/${python.sitePackages}/srht
+  '';
+
+  meta = with stdenv.lib; {
+    homepage = https://git.sr.ht/~sircmpwn/lists.sr.ht;
+    description = "Mailing list service for the sr.ht network";
+    license = licenses.agpl3;
+    maintainers = with maintainers; [ eadwu ];
+  };
+}

pkgs/applications/version-management/sourcehut/man.nix

@@ -0,0 +1,37 @@
+{ stdenv, fetchgit, buildPythonPackage
+, python
+, srht, pygit2 }:
+
+buildPythonPackage rec {
+  pname = "mansrht";
+  version = "0.12.4";
+
+  src = fetchgit {
+    url = "https://git.sr.ht/~sircmpwn/man.sr.ht";
+    rev = version;
+    sha256 = "1csnw71yh5zw7l17xmmxyskwiqbls0ynbbjrg45y5k1i3622mhiy";
+  };
+
+  patches = [
+    ./use-srht-path.patch
+  ];
+
+  nativeBuildInputs = srht.nativeBuildInputs;
+
+  propagatedBuildInputs = [
+    srht
+    pygit2
+  ];
+
+  preBuild = ''
+    export PKGVER=${version}
+    export SRHT_PATH=${srht}/${python.sitePackages}/srht
+  '';
+
+  meta = with stdenv.lib; {
+    homepage = https://git.sr.ht/~sircmpwn/man.sr.ht;
+    description = "Wiki service for the sr.ht network";
+    license = licenses.agpl3;
+    maintainers = with maintainers; [ eadwu ];
+  };
+}

pkgs/applications/version-management/sourcehut/meta.nix

@@ -0,0 +1,48 @@
+{ stdenv, fetchgit, buildPythonPackage
+, python
+, pgpy, srht, redis, bcrypt, qrcode, stripe, zxcvbn, alembic, pystache
+, sshpubkeys, weasyprint, prometheus_client }:
+
+buildPythonPackage rec {
+  pname = "metasrht";
+  version = "0.34.3";
+
+  src = fetchgit {
+    url = "https://git.sr.ht/~sircmpwn/meta.sr.ht";
+    rev = version;
+    sha256 = "1yj3npw1vlqawzj6q1mh6qryx009dg5prja9fn6rasfmxjn2gr7v";
+  };
+
+  nativeBuildInputs = srht.nativeBuildInputs;
+
+  propagatedBuildInputs = [
+    pgpy
+    srht
+    redis
+    bcrypt
+    qrcode
+    stripe
+    zxcvbn
+    alembic
+    pystache
+    sshpubkeys
+    weasyprint
+    prometheus_client
+  ];
+
+  patches = [
+    ./use-srht-path.patch
+  ];
+
+  preBuild = ''
+    export PKGVER=${version}
+    export SRHT_PATH=${srht}/${python.sitePackages}/srht
+  '';
+
+  meta = with stdenv.lib; {
+    homepage = https://git.sr.ht/~sircmpwn/meta.sr.ht;
+    description = "Account management service for the sr.ht network";
+    license = licenses.agpl3;
+    maintainers = with maintainers; [ eadwu ];
+  };
+}

pkgs/applications/version-management/sourcehut/paste.nix

@@ -0,0 +1,37 @@
+{ stdenv, fetchgit, buildPythonPackage
+, python
+, srht, pyyaml }:
+
+buildPythonPackage rec {
+  pname = "pastesrht";
+  version = "0.5.1";
+
+  src = fetchgit {
+    url = "https://git.sr.ht/~sircmpwn/paste.sr.ht";
+    rev = version;
+    sha256 = "0bzw03hcwi1pw16kliqjsr7kphqq3qw0pbpdjqkcs7jdr0a59vny";
+  };
+
+  patches = [
+    ./use-srht-path.patch
+  ];
+
+  nativeBuildInputs = srht.nativeBuildInputs;
+
+  propagatedBuildInputs = [
+    srht
+    pyyaml
+  ];
+
+  preBuild = ''
+    export PKGVER=${version}
+    export SRHT_PATH=${srht}/${python.sitePackages}/srht
+  '';
+
+  meta = with stdenv.lib; {
+    homepage = https://git.sr.ht/~sircmpwn/paste.sr.ht;
+    description = "Ad-hoc text file hosting service for the sr.ht network";
+    license = licenses.agpl3;
+    maintainers = with maintainers; [ eadwu ];
+  };
+}

pkgs/applications/version-management/sourcehut/scm.nix

@@ -0,0 +1,55 @@
+{ stdenv, fetchgit, buildPythonPackage
+, srht, redis, pyyaml, buildsrht
+, writeText }:
+
+buildPythonPackage rec {
+  pname = "scmsrht";
+  version = "0.13.3";
+
+  src = fetchgit {
+    url = "https://git.sr.ht/~sircmpwn/scm.sr.ht";
+    rev = version;
+    sha256 = "0bapddgfqrs27y6prd6kwpz6jdlr33zdqr6ci6ixi584a7z8z7d6";
+  };
+
+  nativeBuildInputs = srht.nativeBuildInputs;
+
+  propagatedBuildInputs = [
+    srht
+    redis
+    pyyaml
+    buildsrht
+  ];
+
+  preBuild = ''
+    export PKGVER=${version}
+  '';
+
+  # No actual? tests but seems like it needs this anyway
+  preCheck = let
+    config = writeText "config.ini" ''
+      [webhooks]
+      private-key=K6JupPpnr0HnBjelKTQUSm3Ro9SgzEA2T2Zv472OvzI=
+
+      [builds.sr.ht]
+      origin=http://builds.sr.ht.local
+      oauth-client-id=
+
+      [meta.sr.ht]
+      origin=http://meta.sr.ht.local
+    '';
+  in ''
+    # Validation needs config option(s)
+    # webhooks <- ( private-key )
+    # meta.sr.ht <- ( origin )
+    # builds.sr.ht <- ( origin, oauth-client-id )
+    cp ${config} config.ini
+  '';
+
+  meta = with stdenv.lib; {
+    homepage = https://git.sr.ht/~sircmpwn/git.sr.ht;
+    description = "Shared support code for sr.ht source control services.";
+    license = licenses.agpl3;
+    maintainers = with maintainers; [ eadwu ];
+  };
+}

pkgs/applications/version-management/sourcehut/todo.nix

@@ -0,0 +1,42 @@
+{ stdenv, fetchgit, buildPythonPackage
+, python
+, srht, redis, alembic, pystache }:
+
+buildPythonPackage rec {
+  pname = "todosrht";
+  version = "0.46.8";
+
+  src = fetchgit {
+    url = "https://git.sr.ht/~sircmpwn/todo.sr.ht";
+    rev = version;
+    sha256 = "17nqqy81535jnkidjiqv8v2301w5wzbbvx4czib69aagw1l85gnn";
+  };
+
+  patches = [
+    ./use-srht-path.patch
+  ];
+
+  nativeBuildInputs = srht.nativeBuildInputs;
+
+  propagatedBuildInputs = [
+    srht
+    redis
+    alembic
+    pystache
+  ];
+
+  preBuild = ''
+    export PKGVER=${version}
+    export SRHT_PATH=${srht}/${python.sitePackages}/srht
+  '';
+
+  # Tests require a network connection
+  doCheck = false;
+
+  meta = with stdenv.lib; {
+    homepage = https://todo.sr.ht/~sircmpwn/todo.sr.ht;
+    description = "Ticket tracking service for the sr.ht network";
+    license = licenses.agpl3;
+    maintainers = with maintainers; [ eadwu ];
+  };
+}

pkgs/applications/version-management/sourcehut/update.sh

@@ -0,0 +1,54 @@
+#! /usr/bin/env nix-shell
+#! nix-shell -i bash -p git mercurial common-updater-scripts
+
+cd "$(dirname "${BASH_SOURCE[0]}")"
+root=../../../..
+
+default() {
+  (cd "$root" && nix-instantiate --eval --strict -A "sourcehut.python.pkgs.$1.meta.position" | sed -re 's/^"(.*):[0-9]+"$/\1/')
+}
+
+version() {
+  (cd "$root" && nix-instantiate --eval --strict -A "sourcehut.python.pkgs.$1.version" | tr -d '"')
+}
+
+src_url() {
+  (cd "$root" && nix-instantiate --eval --strict -A "sourcehut.python.pkgs.$1.src.drvAttrs.url" | tr -d '"')
+}
+
+get_latest_version() {
+  src="$(src_url "$1")"
+  tmp=$(mktemp -d)
+
+  if [ "$1" = "hgsrht" ]; then
+    hg clone "$src" "$tmp" &> /dev/null
+    printf "%s" "$(cd "$tmp" && hg log --limit 1 --template '{latesttag}')"
+  else
+    git clone "$src" "$tmp"
+    printf "%s" "$(cd "$tmp" && git describe $(git rev-list --tags --max-count=1))"
+  fi
+}
+
+update_version() {
+  default_nix="$(default "$1")"
+  version_old="$(version "$1")"
+  version="$(get_latest_version "$1")"
+
+  (cd "$root" && update-source-version "sourcehut.python.pkgs.$1" "$version")
+
+  git add "$default_nix"
+  git commit -m "$1: $version_old -> $version"
+}
+
+services=( "srht" "buildsrht" "dispatchsrht" "gitsrht" "hgsrht" "listssrht" "mansrht" "metasrht"
+           "pastesrht" "todosrht" "scmsrht" )
+
+# Whether or not a specific service is requested
+if [ -n "$1" ]; then
+  version="$(get_latest_version "$1")"
+  (cd "$root" && update-source-version "sourcehut.python.pkgs.$1" "$version")
+else
+  for service in "${services[@]}"; do
+    update_version "$service"
+  done
+fi

pkgs/applications/version-management/sourcehut/use-srht-path.patch

@@ -0,0 +1,43 @@
+diff --git a/setup.py b/setup.py
+index e6ecfb6..89fa92a 100755
+--- a/setup.py
++++ b/setup.py
+@@ -5,28 +5,16 @@ import os
+ import site
+ import sys
+ 
+-if hasattr(site, 'getsitepackages'):
+-    pkg_dirs = site.getsitepackages()
+-    if site.getusersitepackages():
+-        pkg_dirs.append(site.getusersitepackages())
+-    for pkg_dir in pkg_dirs:
+-        srht_path = os.path.join(pkg_dir, "srht")
+-        if os.path.isdir(srht_path):
+-            break
+-    else:
+-        raise Exception("Can't find core srht module in your site packages "
+-            "directories. Please install it first.")
+-else:
+-    srht_path = os.getenv("SRHT_PATH")
+-    if not srht_path:
+-        raise Exception("You're running inside a virtual environment. "
+-            "Due to virtualenv limitations, you need to set the "
+-            "$SRHT_PATH environment variable to the path of the "
+-            "core srht module.")
+-    elif not os.path.isdir(srht_path):
+-        raise Exception(
+-            "The $SRHT_PATH environment variable points to an invalid "
+-            "directory: {}".format(srht_path))
++srht_path = os.getenv("SRHT_PATH")
++if not srht_path:
++    raise Exception("You're running inside a virtual environment. "
++        "Due to virtualenv limitations, you need to set the "
++        "$SRHT_PATH environment variable to the path of the "
++        "core srht module.")
++elif not os.path.isdir(srht_path):
++    raise Exception(
++        "The $SRHT_PATH environment variable points to an invalid "
++        "directory: {}".format(srht_path))
+ 
+ subp = subprocess.run(["make", "SRHT_PATH=" + srht_path])
+ if subp.returncode != 0:

pkgs/applications/video/smplayer/default.nix

@@ -1,6 +1,6 @@
-{ stdenv, fetchurl, qmake, qtscript }:
+{ lib, mkDerivation, fetchurl, qmake, qtscript }:
 
-stdenv.mkDerivation rec {
+mkDerivation rec {
   name = "smplayer-19.5.0";
 
   src = fetchurl {
@@ -20,7 +20,7 @@ stdenv.mkDerivation rec {
   meta = {
     description = "A complete front-end for MPlayer";
     homepage = http://smplayer.sourceforge.net/;
-    license = stdenv.lib.licenses.gpl3Plus;
-    platforms = stdenv.lib.platforms.linux;
+    license = lib.licenses.gpl3Plus;
+    platforms = lib.platforms.linux;
   };
 }

pkgs/applications/video/smtube/default.nix

@@ -1,6 +1,6 @@
-{ stdenv, fetchurl, qmake, qtscript, qtwebkit }:
+{ lib, mkDerivation, fetchurl, qmake, qtscript, qtwebkit }:
 
-stdenv.mkDerivation rec {
+mkDerivation rec {
   version = "19.6.0";
   pname = "smtube";
 
@@ -18,7 +18,7 @@ stdenv.mkDerivation rec {
   nativeBuildInputs = [ qmake ];
   buildInputs = [ qtscript qtwebkit ];
 
-  meta = with stdenv.lib; {
+  meta = with lib; {
     description = "Play and download Youtube videos";
     homepage = http://smplayer.sourceforge.net/smtube.php;
     license = licenses.gpl2Plus;

pkgs/applications/virtualization/podman/default.nix

@@ -5,13 +5,13 @@
 
 buildGoPackage rec {
   pname = "podman";
-  version = "1.4.4";
+  version = "1.5.1";
 
   src = fetchFromGitHub {
     owner  = "containers";
     repo   = "libpod";
     rev    = "v${version}";
-    sha256 = "13qgrvqawrrz4apdcds4amkljyjzx056545962wk8p0d291hqv5a";
+    sha256 = "1jg7fdshqz0x71339i0wndskb17x1k5rwpkjiwd463f96fnbfp4x";
   };
 
   goPackagePath = "github.com/containers/libpod";

pkgs/build-support/docker/default.nix

@@ -291,9 +291,10 @@ rec {
     # Files to add to the layer.
     closure,
     configJson,
-    # Docker has a 42-layer maximum, we pick 24 to ensure there is plenty
-    # of room for extension
-    maxLayers ? 24
+    # Docker has a 125-layer maximum, we pick 100 to ensure there is
+    # plenty of room for extension.
+    # https://github.com/moby/moby/blob/b3e9f7b13b0f0c414fa6253e1f17a86b2cff68b5/layer/layer_store.go#L23-L26
+    maxLayers ? 100
   }:
     let
       storePathToLayer = substituteAll

pkgs/build-support/rust/default.nix

@@ -1,4 +1,4 @@
-{ stdenv, cacert, git, cargo, rustc, fetchcargo, buildPackages }:
+{ stdenv, cacert, git, cargo, rustc, fetchcargo, buildPackages, windows }:
 
 { name ? "${args.pname}-${args.version}"
 , cargoSha256 ? "unset"
@@ -41,18 +41,26 @@ let
       cargoDepsCopy="$sourceRoot/${cargoVendorDir}"
     '';
 
+  hostConfig = stdenv.hostPlatform.config;
+
+  rustHostConfig = {
+    "x86_64-pc-mingw32" = "x86_64-pc-windows-gnu";
+  }."${hostConfig}" or hostConfig;
+
   ccForBuild="${buildPackages.stdenv.cc}/bin/${buildPackages.stdenv.cc.targetPrefix}cc";
   cxxForBuild="${buildPackages.stdenv.cc}/bin/${buildPackages.stdenv.cc.targetPrefix}c++";
   ccForHost="${stdenv.cc}/bin/${stdenv.cc.targetPrefix}cc";
   cxxForHost="${stdenv.cc}/bin/${stdenv.cc.targetPrefix}c++";
-  releaseDir = "target/${stdenv.hostPlatform.config}/${buildType}";
-in stdenv.mkDerivation (args // {
+  releaseDir = "target/${rustHostConfig}/${buildType}";
+in
+
+stdenv.mkDerivation (args // {
   inherit cargoDeps;
 
   patchRegistryDeps = ./patch-registry-deps;
 
-  nativeBuildInputs = [ cargo rustc git cacert ] ++ nativeBuildInputs;
-  inherit buildInputs;
+  nativeBuildInputs = nativeBuildInputs ++ [ cacert git cargo rustc ];
+  buildInputs = buildInputs ++ stdenv.lib.optional stdenv.hostPlatform.isMinGW windows.pthreads;
 
   patches = cargoPatches ++ patches;
 
@@ -76,7 +84,7 @@ in stdenv.mkDerivation (args // {
     [target."${stdenv.buildPlatform.config}"]
     "linker" = "${ccForBuild}"
     ${stdenv.lib.optionalString (stdenv.buildPlatform.config != stdenv.hostPlatform.config) ''
-    [target."${stdenv.hostPlatform.config}"]
+    [target."${rustHostConfig}"]
     "linker" = "${ccForHost}"
     ''}
     EOF
@@ -102,7 +110,7 @@ in stdenv.mkDerivation (args // {
       "CXX_${stdenv.hostPlatform.config}"="${cxxForHost}" \
       cargo build \
         ${stdenv.lib.optionalString (buildType == "release") "--release"} \
-        --target ${stdenv.hostPlatform.config} \
+        --target ${rustHostConfig} \
         --frozen ${concatStringsSep " " cargoBuildFlags}
     )
 

pkgs/data/misc/hackage/default.nix

@@ -1,6 +1,6 @@
 { fetchurl }:
 
 fetchurl {
-  url = "https://github.com/commercialhaskell/all-cabal-hashes/archive/4db96602103463d72e59ce214d0da8af35405f07.tar.gz";
-  sha256 = "14r7m3555ngfafk2wgdj4lnv7zzajcc4j4fiws4k3kr3xwbrwrxr";
+  url = "https://github.com/commercialhaskell/all-cabal-hashes/archive/2b4df08d487f0821b932f92392b67fe12dc1d42c.tar.gz";
+  sha256 = "02d06fr2jr69za5751z25c3x3zspiwdmlhmdmxaj1g48v00gbfag";
 }

pkgs/development/compilers/chicken/5/chicken.nix

@@ -13,7 +13,7 @@ in
 stdenv.mkDerivation {
   name = "chicken-${version}";
 
-  binaryVersion = 9;
+  binaryVersion = 11;
 
   src = fetchurl {
     url = "https://code.call-cc.org/releases/${version}/chicken-${version}.tar.gz";
@@ -22,8 +22,8 @@ stdenv.mkDerivation {
 
   setupHook = lib.ifEnable (bootstrap-chicken != null) ./setup-hook.sh;
 
-  buildFlags = "PLATFORM=${platform} PREFIX=$(out) VARDIR=$(out)/var/lib";
-  installFlags = "PLATFORM=${platform} PREFIX=$(out) VARDIR=$(out)/var/lib";
+  buildFlags = "PLATFORM=${platform} PREFIX=$(out)";
+  installFlags = "PLATFORM=${platform} PREFIX=$(out)";
 
   buildInputs = [
     makeWrapper
@@ -37,10 +37,6 @@ stdenv.mkDerivation {
       wrapProgram $f \
         --prefix PATH : ${stdenv.cc}/bin
     done
-
-    mv $out/var/lib/chicken $out/lib
-    rmdir $out/var/lib
-    rmdir $out/var
   '';
 
   # TODO: Assert csi -R files -p '(pathname-file (repository-path))' == binaryVersion

pkgs/development/compilers/chicken/5/eggs.nix

@@ -1,4 +1,4 @@
-{ pkgs }:
+{ pkgs, stdenv }:
 rec {
   inherit (pkgs) eggDerivation fetchegg;
 
@@ -33,12 +33,12 @@ rec {
   };
 
   srfi-1 = eggDerivation {
-    name = "srfi-1-0.5";
+    name = "srfi-1-0.5.1";
 
     src = fetchegg {
       name = "srfi-1";
-      version = "0.5";
-      sha256 = "0gh1h406xbxwm5gvc5znc93nxp9xjbhyqf7zzga08k5y6igxrlvk";
+      version = "0.5.1";
+      sha256 = "15x0ajdkw5gb3vgs8flzh5g0pzl3wmcpf11iimlm67mw6fxc8p7j";
     };
 
     buildInputs = [
@@ -47,12 +47,12 @@ rec {
   };
 
   srfi-13 = eggDerivation {
-    name = "srfi-13-0.2";
+    name = "srfi-13-0.2.1";
 
     src = fetchegg {
       name = "srfi-13";
-      version = "0.2";
-      sha256 = "0jazbdnn9bjm7wwxqq7xzqxc9zfvaapq565rf1czj6ayl96yvk3n";
+      version = "0.2.1";
+      sha256 = "0204i7fhc4dy0l89lbi2lv9cjndrvwyrk68z3wy7x445jb4ky1gq";
     };
 
     buildInputs = [
@@ -61,12 +61,12 @@ rec {
   };
 
   srfi-14 = eggDerivation {
-    name = "srfi-14-0.2";
+    name = "srfi-14-0.2.1";
 
     src = fetchegg {
       name = "srfi-14";
-      version = "0.2";
-      sha256 = "13nm4nn1d52nkvhjizy26z3s6q41x1ml4zm847xzf86x1zwvymni";
+      version = "0.2.1";
+      sha256 = "0gc33cx4xll9vsf7fm8jvn3gc0604kn3bbi6jfn6xscqp86kqb9p";
     };
 
     buildInputs = [

pkgs/development/compilers/chicken/5/setup-hook.sh

@@ -1,5 +1,5 @@
 addChickenRepositoryPath() {
-    addToSearchPathWithCustomDelimiter : CHICKEN_REPOSITORY_PATH "$1/lib/chicken/9/"
+    addToSearchPathWithCustomDelimiter : CHICKEN_REPOSITORY_PATH "$1/lib/chicken/11/"
     addToSearchPathWithCustomDelimiter : CHICKEN_INCLUDE_PATH "$1/share/"
 }
 

pkgs/development/compilers/gambit/unstable.nix

@@ -1,13 +1,13 @@
 { stdenv, callPackage, fetchFromGitHub }:
 
 callPackage ./build.nix {
-  version = "unstable-2019-02-05";
-# git-version = "4.9.3";
+  version = "unstable-2019-07-21";
+# git-version = "4.9.3-109-g3b5f74fa";
   src = fetchFromGitHub {
     owner = "feeley";
     repo = "gambit";
-    rev = "baf7de67f6d800821412fe83a8d9e9e09faeb490";
-    sha256 = "0ygm5y8fvq6dbb8mwq52v8rc8pdnwm4qpmxlnx5m9hzzbm1kzxxv";
+    rev = "3b5f74fae74b2159e3bf6923f29a18b31cc15dcc";
+    sha256 = "07cb0d8754dqhxawkp5dp4y0bsa9kfald4dkj60j5yfnsp81y5mi";
   };
   inherit stdenv;
 }

pkgs/development/compilers/gerbil/unstable.nix

@@ -1,14 +1,14 @@
 { stdenv, callPackage, fetchFromGitHub, gambit-unstable }:
 
 callPackage ./build.nix {
-  version = "unstable-2019-02-09";
-  git-version = "0.16-DEV-15-gafc20fc2";
+  version = "unstable-2019-08-11";
+  git-version = "0.16-DEV-132-gcb58f9a3";
   gambit = gambit-unstable;
   src = fetchFromGitHub {
     owner = "vyzo";
     repo = "gerbil";
-    rev = "afc20fc21030e8445b46b8267cc4c52cfd662aad";
-    sha256 = "02v16zya9zryjs4wallibp1kvnpba60aw15y4k7zhddc71qjfbhw";
+    rev = "cb58f9a30630a6f3e85a55f2c1dcc654f517ffed";
+    sha256 = "18jh64v1gi6z3pks9zf19f2wcjpv21cs270dnaq617kgwp53vysh";
   };
   inherit stdenv;
 }

pkgs/development/compilers/ghc/8.8.1.nix

@@ -86,12 +86,12 @@ let
 
 in
 stdenv.mkDerivation (rec {
-  version = "8.8.0.20190613";
+  version = "8.8.0.20190721";
   name = "${targetPrefix}ghc-${version}";
 
   src = fetchurl {
-    url = "https://downloads.haskell.org/~ghc/8.8.1-alpha2/ghc-${version}-src.tar.xz";
-    sha256 = "17531jabkdmlhj57mkshjfwlri2g3jgal8fw9zpkl1kbplnrivyr";
+    url = "https://downloads.haskell.org/ghc/8.8.1-rc1/ghc-${version}-src.tar.xz";
+    sha256 = "1ih76zpxk8ay84xjyaflqc754002y8pdaainqfvb4cnhy6lpb1br";
   };
 
   enableParallelBuilding = true;

pkgs/development/compilers/llvm/8/clang/compiler-rt-baremetal.patch

@@ -0,0 +1,53 @@
+Index: lib/Driver/ToolChains/BareMetal.cpp
+===================================================================
+--- a/lib/Driver/ToolChains/BareMetal.cpp
++++ b/lib/Driver/ToolChains/BareMetal.cpp
+@@ -157,7 +157,7 @@
+ void BareMetal::AddLinkRuntimeLib(const ArgList &Args,
+                                   ArgStringList &CmdArgs) const {
+   CmdArgs.push_back(Args.MakeArgString("-lclang_rt.builtins-" +
+-                                       getTriple().getArchName() + ".a"));
++                                       getTriple().getArchName()));
+ }
+ 
+ void baremetal::Linker::ConstructJob(Compilation &C, const JobAction &JA,
+Index: test/Driver/baremetal.cpp
+===================================================================
+--- a/test/Driver/baremetal.cpp
++++ b/test/Driver/baremetal.cpp
+@@ -13,7 +13,7 @@
+ // CHECK-V6M-C-NEXT: "{{[^"]*}}ld{{(\.(lld|bfd|gold))?}}{{(\.exe)?}}" "{{.*}}.o" "-Bstatic"
+ // CHECK-V6M-C-SAME: "-L[[RESOURCE_DIR:[^"]+]]{{[/\\]+}}lib{{[/\\]+}}baremetal"
+ // CHECK-V6M-C-SAME: "-T" "semihosted.lds" "-Lsome{{[/\\]+}}directory{{[/\\]+}}user{{[/\\]+}}asked{{[/\\]+}}for"
+-// CHECK-V6M-C-SAME: "-lc" "-lm" "-lclang_rt.builtins-armv6m.a"
++// CHECK-V6M-C-SAME: "-lc" "-lm" "-lclang_rt.builtins-armv6m"
+ // CHECK-V6M-C-SAME: "-o" "{{.*}}.o"
+ 
+ // RUN: %clang -no-canonical-prefixes %s -### -o %t.o 2>&1 \
+@@ -35,7 +35,7 @@
+ // CHECK-V6M-DEFAULTCXX: "{{[^"]*}}ld{{(\.(lld|bfd|gold))?}}{{(\.exe)?}}" "{{.*}}.o" "-Bstatic"
+ // CHECK-V6M-DEFAULTCXX-SAME: "-L{{[^"]*}}{{[/\\]+}}lib{{(64)?}}{{[/\\]+}}clang{{[/\\]+}}{{.*}}{{[/\\]+}}lib{{[/\\]+}}baremetal"
+ // CHECK-V6M-DEFAULTCXX-SAME: "-lc++" "-lc++abi" "-lunwind"
+-// CHECK-V6M-DEFAULTCXX-SAME: "-lc" "-lm" "-lclang_rt.builtins-armv6m.a"
++// CHECK-V6M-DEFAULTCXX-SAME: "-lc" "-lm" "-lclang_rt.builtins-armv6m"
+ // CHECK-V6M-DEFAULTCXX-SAME: "-o" "{{.*}}.o"
+ 
+ // RUN: %clangxx -no-canonical-prefixes %s -### -o %t.o 2>&1 \
+@@ -48,7 +48,7 @@
+ // CHECK-V6M-LIBCXX: "{{[^"]*}}ld{{(\.(lld|bfd|gold))?}}{{(\.exe)?}}" "{{.*}}.o" "-Bstatic"
+ // CHECK-V6M-LIBCXX-SAME: "-L{{[^"]*}}{{[/\\]+}}lib{{(64)?}}{{[/\\]+}}clang{{[/\\]+}}{{.*}}{{[/\\]+}}lib{{[/\\]+}}baremetal"
+ // CHECK-V6M-LIBCXX-SAME: "-lc++" "-lc++abi" "-lunwind"
+-// CHECK-V6M-LIBCXX-SAME: "-lc" "-lm" "-lclang_rt.builtins-armv6m.a"
++// CHECK-V6M-LIBCXX-SAME: "-lc" "-lm" "-lclang_rt.builtins-armv6m"
+ // CHECK-V6M-LIBCXX-SAME: "-o" "{{.*}}.o"
+ 
+ // RUN: %clangxx -no-canonical-prefixes %s -### -o %t.o 2>&1 \
+@@ -61,7 +61,7 @@
+ // CHECK-V6M-LIBSTDCXX: "{{[^"]*}}ld{{(\.(lld|bfd|gold))?}}{{(\.exe)?}}" "{{.*}}.o" "-Bstatic"
+ // CHECK-V6M-LIBSTDCXX-SAME: "-L{{[^"]*}}{{[/\\]+}}lib{{(64)?}}{{[/\\]+}}clang{{[/\\]+}}{{.*}}{{[/\\]+}}lib{{[/\\]+}}baremetal"
+ // CHECK-V6M-LIBSTDCXX-SAME: "-lstdc++" "-lsupc++" "-lunwind"
+-// CHECK-V6M-LIBSTDCXX-SAME: "-lc" "-lm" "-lclang_rt.builtins-armv6m.a"
++// CHECK-V6M-LIBSTDCXX-SAME: "-lc" "-lm" "-lclang_rt.builtins-armv6m"
+ // CHECK-V6M-LIBSTDCXX-SAME: "-o" "{{.*}}.o"
+ 
+ // RUN: %clangxx -no-canonical-prefixes %s -### -o %t.o 2>&1 \

pkgs/development/compilers/llvm/8/clang/default.nix

@@ -47,6 +47,8 @@ let
       # Backport for the `--unwindlib=[libgcc|compiler-rt]` flag, which is
       # needed for our bootstrapping to not interfere with C.
       ./unwindlib.patch
+      # https://reviews.llvm.org/D51899
+      ./compiler-rt-baremetal.patch
     ];
 
     postPatch = ''

pkgs/development/compilers/llvm/8/compiler-rt.nix

@@ -27,6 +27,9 @@ stdenv.mkDerivation rec {
     "-DCOMPILER_RT_BUILD_XRAY=OFF"
     "-DCOMPILER_RT_BUILD_LIBFUZZER=OFF"
     "-DCOMPILER_RT_BUILD_PROFILE=OFF"
+  ] ++ stdenv.lib.optionals (stdenv.hostPlatform.parsed.kernel.name == "none") [
+    "-DCOMPILER_RT_BAREMETAL_BUILD=ON"
+    "-DCOMPILER_RT_OS_DIR=baremetal"
   ];
 
   outputs = [ "out" "dev" ];

pkgs/development/compilers/ponyc/default.nix

@@ -25,6 +25,10 @@ stdenv.mkDerivation ( rec {
     substituteInPlace packages/process/_test.pony \
         --replace '=/bin' "${coreutils}/bin"
 
+    # Disabling the stdlib tests
+    substituteInPlace Makefile-ponyc \
+        --replace 'test-ci: all check-version test-core test-stdlib-debug test-stdlib' 'test-ci: all check-version test-core'
+
     # Remove impure system refs
     substituteInPlace src/libponyc/pkg/package.c \
         --replace "/usr/local/lib" "" \

pkgs/development/compilers/rust/clippy.nix

@@ -0,0 +1,35 @@
+{ stdenv, lib, rustPlatform, rustc, Security, patchelf }:
+rustPlatform.buildRustPackage rec {
+  name = "clippy-${rustc.version}";
+  inherit (rustc) version src;
+
+  # the rust source tarball already has all the dependencies vendored, no need to fetch them again
+  cargoVendorDir = "vendor";
+  preBuild = "pushd src/tools/clippy";
+  postBuild = "popd";
+
+  # changes hash of vendor directory otherwise
+  dontUpdateAutotoolsGnuConfigScripts = true;
+
+  buildInputs = [ rustc ] ++ stdenv.lib.optionals stdenv.isDarwin [ Security ];
+
+  # fixes: error: the option `Z` is only accepted on the nightly compiler
+  RUSTC_BOOTSTRAP = 1;
+
+  # Without disabling the test the build fails with:
+  # error: failed to run custom build command for `rustc_llvm v0.0.0
+  #   (/private/tmp/nix-build-clippy-1.36.0.drv-0/rustc-1.36.0-src/src/librustc_llvm)
+  doCheck = false;
+
+  preFixup = stdenv.lib.optionalString stdenv.isDarwin ''
+    install_name_tool -add_rpath "${rustc}/lib" $out/bin/clippy-driver
+  '';
+
+  meta = with stdenv.lib; {
+    homepage = https://rust-lang.github.io/rust-clippy/;
+    description = "A bunch of lints to catch common mistakes and improve your Rust code";
+    maintainers = with maintainers; [ basvandijk ];
+    license = with licenses; [ mit asl20 ];
+    platforms = platforms.unix;
+  };
+}

pkgs/development/compilers/rust/default.nix

@@ -64,6 +64,7 @@
         rustPlatform = bootRustPlatform;
         inherit CoreFoundation Security;
       };
+      clippy = self.callPackage ./clippy.nix { inherit Security; };
     });
   };
 }

pkgs/development/haskell-modules/configuration-common.nix

@@ -214,15 +214,19 @@ self: super: {
   # base bound
   digit = doJailbreak super.digit;
 
+  # Needs older version of QuickCheck.
+  these_0_7_6 = doJailbreak super.these_0_7_6;
+
   # dontCheck: Can be removed once https://github.com/haskell-nix/hnix/commit/471712f is in (5.2 probably)
   #   This is due to GenList having been removed from generic-random in 1.2.0.0
   # doJailbreak: Can be removed once https://github.com/haskell-nix/hnix/pull/329 is in (5.2 probably)
   #   This is due to hnix currently having an upper bound of <0.5 on deriving-compat, works just fine with our current version 0.5.1 though
+  # Does not support recent versions of "these".
+  # https://github.com/haskell-nix/hnix/issues/514
   hnix =
     generateOptparseApplicativeCompletion "hnix" (
-    dontCheck (doJailbreak (overrideCabal super.hnix (old: {
-      testHaskellDepends = old.testHaskellDepends or [] ++ [ pkgs.nix ];
-  }))));
+      dontCheck (doJailbreak (super.hnix.override { these = self.these_0_7_6; }))
+    );
 
   # Fails for non-obvious reasons while attempting to use doctest.
   search = dontCheck super.search;
@@ -1224,14 +1228,14 @@ self: super: {
   # The latest release version is ancient. You really need this tool from git.
   haskell-ci = generateOptparseApplicativeCompletion "haskell-ci"
     (addBuildDepend (overrideSrc (dontCheck super.haskell-ci) {
-      version = "20190625-git";
+      version = "20190814-git";
       src = pkgs.fetchFromGitHub {
         owner = "haskell-CI";
         repo = "haskell-ci";
-        rev = "260f967c6973dfb22ecc8061a1811a2ea4b79e01";
-        sha256 = "1mvn6pqa6wfcm4jxhlhm4l54pwrlgnz7vdrmkwabliwz4q0bzgqk";
+        rev = "70918d80b6fd43aca7e4d00ba0d2ea116b666556";
+        sha256 = "0bzp959qy74zmqq75f60rcixpjbvvyrb5a8zp2nyql3nm9vxzy5k";
       };
-  }) (with self; [base-compat generic-lens microlens optparse-applicative ShellCheck exceptions temporary]));
+  }) (with self; [temporary lattices Cabal_3_0_0_0]));
 
   # Fix build with attr-2.4.48 (see #53716)
   xattr = appendPatch super.xattr ./patches/xattr-fix-build.patch;

pkgs/development/haskell-modules/configuration-hackage2nix.yaml

@@ -43,7 +43,7 @@ core-packages:
   - ghcjs-base-0
 
 default-package-overrides:
-  # LTS Haskell 14.0
+  # LTS Haskell 14.1
   - abstract-deque ==0.3
   - abstract-deque-tests ==0.3
   - abstract-par ==0.3.3
@@ -91,8 +91,8 @@ default-package-overrides:
   - ANum ==0.2.0.2
   - aos-signature ==0.1.1
   - apecs ==0.8.1
-  - apecs-gloss ==0.2.1
-  - apecs-physics ==0.4.0
+  - apecs-gloss ==0.2.2
+  - apecs-physics ==0.4.2
   - api-field-json-th ==0.1.0.2
   - appar ==0.1.8
   - appendmap ==0.1.5
@@ -134,12 +134,12 @@ default-package-overrides:
   - authenticate ==1.3.4
   - authenticate-oauth ==1.6
   - auto ==0.4.3.1
-  - autoexporter ==1.1.13
+  - autoexporter ==1.1.14
   - auto-update ==0.1.6
   - avers ==0.0.17.1
   - avers-api ==0.1.0
   - avers-server ==0.1.0.1
-  - avro ==0.4.5.1
+  - avro ==0.4.5.2
   - avwx ==0.3.0.2
   - aws-cloudfront-signed-cookies ==0.2.0.1
   - aws-lambda-haskell-runtime ==2.0.1
@@ -203,7 +203,7 @@ default-package-overrides:
   - bits ==0.5.2
   - bitset-word8 ==0.1.1.1
   - bits-extra ==0.0.1.3
-  - bitvec ==1.0.0.0
+  - bitvec ==1.0.0.1
   - bitx-bitcoin ==0.12.0.0
   - blake2 ==0.3.0
   - blas-carray ==0.1.0.1
@@ -260,7 +260,7 @@ default-package-overrides:
   - bytestring-to-vector ==0.3.0.1
   - bytestring-tree-builder ==0.2.7.3
   - bzlib ==0.5.0.5
-  - bzlib-conduit ==0.3.0.1
+  - bzlib-conduit ==0.3.0.2
   - c2hs ==0.28.6
   - Cabal ==2.4.1.0
   - cabal2spec ==2.2.2.1
@@ -413,7 +413,7 @@ default-package-overrides:
   - crc32c ==0.0.0
   - credential-store ==0.1.2
   - criterion ==1.5.5.0
-  - criterion-measurement ==0.1.1.0
+  - criterion-measurement ==0.1.2.0
   - cron ==0.6.1
   - crypto-api ==0.13.3
   - crypto-api-tests ==0.3
@@ -540,7 +540,7 @@ default-package-overrides:
   - distribution-opensuse ==1.1.1
   - distributive ==0.6
   - dl-fedora ==0.5
-  - dlist ==0.8.0.6
+  - dlist ==0.8.0.7
   - dlist-instances ==0.1.1.1
   - dlist-nonempty ==0.1.1
   - dns ==4.0.0
@@ -581,7 +581,7 @@ default-package-overrides:
   - edit-distance-vector ==1.0.0.4
   - editor-open ==0.6.0.0
   - either ==5.0.1.1
-  - either-both ==0.1.0.0
+  - either-both ==0.1.1.1
   - ekg ==0.4.0.15
   - ekg-core ==0.1.1.6
   - ekg-json ==0.1.0.6
@@ -668,7 +668,7 @@ default-package-overrides:
   - filepattern ==0.1.1
   - fileplow ==0.1.0.0
   - filter-logger ==0.6.0.0
-  - filtrable ==0.1.1.0
+  - filtrable ==0.1.2.0
   - fin ==0.1
   - FindBin ==0.0.5
   - fingertree ==0.1.4.2
@@ -852,12 +852,12 @@ default-package-overrides:
   - HandsomeSoup ==0.4.2
   - hapistrano ==0.3.9.3
   - happy ==1.19.11
-  - hasbolt ==0.1.3.3
+  - hasbolt ==0.1.3.4
   - hashable ==1.2.7.0
   - hashable-time ==0.2.0.2
   - hashids ==1.0.2.4
   - hashmap ==1.3.3
-  - hashtables ==1.2.3.3
+  - hashtables ==1.2.3.4
   - haskeline ==0.7.5.0
   - haskell-gi ==0.23.0
   - haskell-gi-base ==0.23.0
@@ -893,7 +893,7 @@ default-package-overrides:
   - hedgehog ==1.0
   - hedgehog-corpus ==0.1.0
   - hedgehog-fn ==1.0
-  - hedis ==0.12.6
+  - hedis ==0.12.7
   - hedn ==0.2.0.1
   - here ==1.2.13
   - heredoc ==0.2.0.0
@@ -1184,7 +1184,7 @@ default-package-overrides:
   - language-java ==0.2.9
   - language-javascript ==0.6.0.13
   - language-puppet ==1.4.5
-  - lapack ==0.3.0.1
+  - lapack ==0.3.1
   - lapack-carray ==0.0.3
   - lapack-comfort-array ==0.0.0.1
   - lapack-ffi ==0.0.2
@@ -1229,7 +1229,7 @@ default-package-overrides:
   - lift-generics ==0.1.2
   - line ==4.0.1
   - linear ==1.20.9
-  - linear-circuit ==0.1.0.1
+  - linear-circuit ==0.1.0.2
   - linux-file-extents ==0.2.0.0
   - linux-namespaces ==0.1.3.0
   - List ==0.6.2
@@ -1338,7 +1338,7 @@ default-package-overrides:
   - mmtf ==0.1.3.1
   - mnist-idx ==0.1.2.8
   - mockery ==0.3.5
-  - modern-uri ==0.3.0.1
+  - modern-uri ==0.3.1.0
   - modular ==0.1.0.8
   - monad-control ==1.0.2.3
   - monad-control-aligned ==0.0.1.1
@@ -1509,14 +1509,14 @@ default-package-overrides:
   - pandoc-citeproc ==0.16.2
   - pandoc-csv2table ==1.0.7
   - pandoc-markdown-ghci-filter ==0.1.0.0
-  - pandoc-pyplot ==2.1.4.0
+  - pandoc-pyplot ==2.1.5.1
   - pandoc-types ==1.17.5.4
   - pantry ==0.1.1.1
   - parallel ==3.2.2.0
   - parallel-io ==0.3.3
   - paripari ==0.6.0.0
   - parseargs ==0.2.0.9
-  - parsec ==3.1.13.0
+  - parsec ==3.1.14.0
   - parsec-class ==1.0.0.0
   - parsec-numbers ==0.1.0
   - parsec-numeric ==0.1.0.0
@@ -1610,7 +1610,7 @@ default-package-overrides:
   - port-utils ==0.2.1.0
   - posix-paths ==0.2.1.6
   - possibly ==1.0.0.0
-  - postgresql-binary ==0.12.1.2
+  - postgresql-binary ==0.12.1.3
   - postgresql-libpq ==0.9.4.2
   - postgresql-orm ==0.5.1
   - postgresql-schema ==0.1.14
@@ -1692,7 +1692,7 @@ default-package-overrides:
   - quickcheck-classes ==0.6.1.0
   - quickcheck-instances ==0.3.22
   - quickcheck-io ==0.2.0
-  - quickcheck-simple ==0.1.1.0
+  - quickcheck-simple ==0.1.1.1
   - quickcheck-special ==0.1.0.6
   - quickcheck-state-machine ==0.6.0
   - quickcheck-text ==0.1.2.1
@@ -1754,7 +1754,7 @@ default-package-overrides:
   - regex-tdfa ==1.2.3.2
   - regex-tdfa-text ==1.0.0.3
   - regex-with-pcre ==1.0.2.0
-  - registry ==0.1.6.2
+  - registry ==0.1.7.0
   - reinterpret-cast ==0.1.0
   - relapse ==1.0.0.0
   - relational-query ==0.12.2.2
@@ -1771,7 +1771,7 @@ default-package-overrides:
   - req-conduit ==1.0.0
   - require ==0.4.2
   - rerebase ==1.3.1.1
-  - resistor-cube ==0.0.1.1
+  - resistor-cube ==0.0.1.2
   - resource-pool ==0.2.3.2
   - resourcet ==1.2.2
   - result ==0.2.6.0
@@ -1808,7 +1808,7 @@ default-package-overrides:
   - safe-json ==0.1.0
   - safe-money ==0.9
   - SafeSemaphore ==0.10.1
-  - salak ==0.3.3
+  - salak ==0.3.3.1
   - salak-toml ==0.3.3
   - salak-yaml ==0.3.3
   - saltine ==0.1.0.2
@@ -2222,7 +2222,7 @@ default-package-overrides:
   - ucam-webauth ==0.1.0.0
   - ucam-webauth-types ==0.1.0.0
   - uglymemo ==0.1.0.1
-  - unagi-chan ==0.4.1.0
+  - unagi-chan ==0.4.1.2
   - unbounded-delays ==0.1.1.0
   - unbound-generics ==0.4.0
   - unboxed-ref ==0.4.0.0
@@ -2251,7 +2251,7 @@ default-package-overrides:
   - universe-reverse-instances ==1.1
   - universum ==1.5.0
   - unix-bytestring ==0.3.7.3
-  - unix-compat ==0.5.1
+  - unix-compat ==0.5.2
   - unix-time ==0.4.7
   - unliftio ==0.2.12
   - unliftio-core ==0.1.2.0
@@ -2361,7 +2361,7 @@ default-package-overrides:
   - windns ==0.1.0.1
   - winery ==1.1.2
   - wire-streams ==0.1.1.0
-  - witherable ==0.3.1
+  - witherable ==0.3.2
   - with-location ==0.1.0
   - witness ==0.4
   - wizards ==1.0.3
@@ -2522,6 +2522,7 @@ extra-packages:
   - seqid-streams < 0.2                 # newer versions depend on transformers 0.4.x which we cannot provide in GHC 7.8.x
   - split < 0.2                         # newer versions don't work with GHC 6.12.3
   - tar < 0.4.2.0                       # later versions don't work with GHC < 7.6.x
+  - these == 0.7.6                      # required by hnix 0.6.1
   - transformers == 0.4.3.*             # the latest version isn't supported by mtl yet
   - vector < 0.10.10                    # newer versions don't work with GHC 6.12.3
   - xml-conduit ^>= 1.7                 # pre-lts-11.x versions neeed by git-annex 6.20180227
@@ -3253,6 +3254,7 @@ broken-packages:
   - Bang
   - bank-holiday-usa
   - banwords
+  - barbly
   - barchart
   - barcodes-code128
   - barecheck
@@ -4943,6 +4945,7 @@ broken-packages:
   - functional-arrow
   - functor
   - functor-combinators
+  - functor-products
   - functorm
   - funflow
   - funflow-nix
@@ -5921,7 +5924,6 @@ broken-packages:
   - hmumps
   - hnetcdf
   - hnix
-  - hnix-store-core
   - hnix-store-remote
   - HNM
   - hnormalise
@@ -5990,7 +5992,6 @@ broken-packages:
   - hp2any-core
   - hp2any-graph
   - hp2any-manager
-  - hpack
   - hpack-convert
   - hpack-dhall
   - hpaco
@@ -6237,7 +6238,6 @@ broken-packages:
   - http-conduit-browser
   - http-directory
   - http-dispatch
-  - http-download
   - http-enumerator
   - http-grammar
   - http-kinder
@@ -6579,7 +6579,6 @@ broken-packages:
   - join-api
   - joinlist
   - jonathanscard
-  - jose
   - jpeg
   - js-good-parts
   - jsaddle-hello
@@ -7612,6 +7611,7 @@ broken-packages:
   - Nomyx-Web
   - non-empty-zipper
   - NonEmpty
+  - nonempty-lift
   - NonEmptyList
   - normalization-insensitive
   - NoSlow
@@ -7792,7 +7792,6 @@ broken-packages:
   - pang-a-lambda
   - pangraph
   - panpipe
-  - pantry
   - pantry-tmp
   - papa-export
   - papa-implement
@@ -8532,6 +8531,7 @@ broken-packages:
   - rfc-servant
   - rg
   - rhythm-game-tutorial
+  - rib
   - RichConditional
   - ridley
   - ridley-extras
@@ -8767,7 +8767,6 @@ broken-packages:
   - servant-aeson-specs
   - servant-auth-cookie
   - servant-auth-hmac
-  - servant-auth-server
   - servant-auth-token
   - servant-auth-token-acid
   - servant-auth-token-api
@@ -9106,6 +9105,7 @@ broken-packages:
   - sparrow
   - sparse
   - sparse-lin-alg
+  - sparse-tensor
   - sparsebit
   - sparsecheck
   - sparser
@@ -9394,6 +9394,7 @@ broken-packages:
   - taglib-api
   - tagsoup-ht
   - tagsoup-megaparsec
+  - tagsoup-navigate
   - tagsoup-parsec
   - tagsoup-selection
   - tai64
@@ -9413,11 +9414,9 @@ broken-packages:
   - task-distribution
   - taskell
   - tasty-auto
-  - tasty-discover
   - tasty-fail-fast
   - tasty-groundhog-converters
   - tasty-hedgehog-coverage
-  - tasty-hspec
   - tasty-integrate
   - tasty-jenkins-xml
   - tasty-laws
@@ -10292,6 +10291,7 @@ broken-packages:
   - yate
   - yavie
   - yaya
+  - yaya-hedgehog
   - yaya-unsafe
   - ycextra
   - yeller

pkgs/development/haskell-modules/configuration-nix.nix

@@ -95,6 +95,7 @@ self: super: builtins.intersectAttrs super {
   sfml-audio = appendConfigureFlag super.sfml-audio "--extra-include-dirs=${pkgs.openal}/include/AL";
 
   cachix = enableSeparateBinOutput super.cachix;
+  ghcid = enableSeparateBinOutput super.ghcid;
 
   hzk = overrideCabal super.hzk (drv: {
     preConfigure = "sed -i -e /include-dirs/d hzk.cabal";

pkgs/development/interpreters/erlang/R19.nix

@@ -14,6 +14,6 @@ mkDerivation rec {
   ];
 
   prePatch = ''
-    substituteInPlace configure.in --replace '`sw_vers -productVersion`' '10.10'
+    substituteInPlace configure.in --replace '`sw_vers -productVersion`' "''${MACOSX_DEPLOYMENT_TARGET:-10.12}"
   '';
 }

pkgs/development/interpreters/erlang/R20.nix

@@ -5,6 +5,6 @@ mkDerivation rec {
   sha256 = "0v2iiyzss8hiih98wvj0gi2qzdmmhh7bvc9p025wlfm4k7r1109a";
 
   prePatch = ''
-    substituteInPlace configure.in --replace '`sw_vers -productVersion`' '10.10'
+    substituteInPlace configure.in --replace '`sw_vers -productVersion`' "''${MACOSX_DEPLOYMENT_TARGET:-10.12}"
   '';
 }

pkgs/development/interpreters/erlang/R21.nix

@@ -5,6 +5,6 @@ mkDerivation rec {
   sha256 = "1szybirrcpqsl2nmlmpbkxjqnm6i7l7bma87m5cpwi0kpvlxwmcw";
 
   prePatch = ''
-    substituteInPlace configure.in --replace '`sw_vers -productVersion`' '10.10'
+    substituteInPlace configure.in --replace '`sw_vers -productVersion`' "''${MACOSX_DEPLOYMENT_TARGET:-10.12}"
   '';
 }

pkgs/development/interpreters/erlang/R22.nix

@@ -5,7 +5,7 @@ mkDerivation rec {
   sha256 = "1aqkhd6nwdn4xp5yz02zbymd4x8ij8fjw9ji8kh860n1a513k9ai";
 
   prePatch = ''
-    substituteInPlace make/configure.in --replace '`sw_vers -productVersion`' '10.10'
+    substituteInPlace make/configure.in --replace '`sw_vers -productVersion`' "''${MACOSX_DEPLOYMENT_TARGET:-10.12}"
     substituteInPlace erts/configure.in --replace '-Wl,-no_weak_imports' ""
   '';
 }

pkgs/development/interpreters/wasmtime/default.nix

@@ -1,18 +1,18 @@
 { rustPlatform, fetchFromGitHub, lib, python, cmake, llvmPackages, clang }:
 
 rustPlatform.buildRustPackage rec {
-  name = "wasmtime-${version}";
-  version = "0.1.0";
+  pname = "wasmtime";
+  version = "20190521";
 
   src = fetchFromGitHub {
     owner = "CraneStation";
     repo = "wasmtime";
-    rev = "07a6ca8f4e1136ecd9f4af8d1f03a01aade60407";
-    sha256 = "1cq6nz90kaf023mcyblca90bpvbzhq8xjq01laa28v7r50lagcn5";
+    rev = "e530a582afe6a2b5735fd7cdf5e2e88391e58669";
+    sha256 = "13lqf9dp1cnw7ms7hcgirmlfkr0v7nrn3p5g7yacfasrqgnwsyl8";
     fetchSubmodules = true;
   };
 
-  cargoSha256 = "0xy8vazb4nc4q1098ws92j1yfwp9w7q30z0yk2gindkn898603bc";
+  cargoSha256 = "1jbpq09czm295316gdv3y0pfapqs0ynj3qbarwlnrv7valq5ak13";
 
   cargoPatches = [ ./cargo-lock.patch ];
 

pkgs/development/libraries/crc32c/default.nix

@@ -0,0 +1,24 @@
+{ stdenv, fetchFromGitHub, cmake, gflags }:
+stdenv.mkDerivation rec {
+  pname = "crc32c";
+  version = "1.1.0";
+
+  src = fetchFromGitHub {
+    owner = "google";
+    repo = "crc32c";
+    rev = version;
+    sha256 = "1sazkis9rzbrklfrvk7jn1mqywnq4yghmzg94mxd153h8b1sb149";
+    fetchSubmodules = true;
+  };
+
+  nativeBuildInputs = [ cmake ];
+  buildInputs = [ gflags ];
+  NIX_CFLAGS_COMPILE = stdenv.lib.optional stdenv.isAarch64 "-march=armv8-a+crc";
+
+  meta = with stdenv.lib; {
+    homepage = https://github.com/google/crc32c;
+    description = "CRC32C implementation with support for CPU-specific acceleration instructions";
+    license = with licenses; [ bsd3 ];
+    maintainers = with maintainers; [ andir ];
+  };
+}

pkgs/development/libraries/cre2/default.nix

@@ -4,12 +4,12 @@
 stdenv.mkDerivation rec {
   pname = "cre2";
   version = "0.3.0";
-    
+
   src = fetchFromGitHub {
     owner = "marcomaggi";
     repo = "cre2";
-    rev = version;
-    sha256 = "12yrdad87jjqrhbqm02hzsayan2402vf61a9x1b2iabv6d1c1bnj";
+    rev = "v${version}";
+    sha256 = "1h9jwn6z8kjf4agla85b5xf7gfkdwncp0mfd8zwk98jkm8y2qx9q";
   };
 
   nativeBuildInputs = [

pkgs/development/libraries/google-cloud-cpp/default.nix

@@ -0,0 +1,65 @@
+{ stdenv, grpc, curl, cmake, pkgconfig, fetchFromGitHub, doxygen, protobuf, crc32c, c-ares, nlohmann_json, fetchurl }:
+let
+  googleapis_rev = "a8ee1416f4c588f2ab92da72e7c1f588c784d3e6";
+  googleapis = fetchurl {
+    name = "${googleapis_rev}.tar.gz";
+    url = "https://github.com/googleapis/googleapis/archive/${googleapis_rev}.tar.gz";
+    sha256 = "1kxi27r034p7jfldhvgpbn6rqqqddycnja47m6jyjxj4rcmrp2kb";
+  };
+in stdenv.mkDerivation rec {
+  pname = "google-cloud-cpp";
+  version = "0.11.0";
+
+  src = fetchFromGitHub {
+    owner = "googleapis";
+    repo = "google-cloud-cpp";
+    rev = "v${version}";
+    sha256 = "1w942gzyv01ym1cv2a417x92zxra9s2v3xz5crcv84j919f616f8";
+  };
+
+  buildInputs = [ curl grpc protobuf nlohmann_json crc32c c-ares c-ares.cmake-config ];
+  nativeBuildInputs = [ cmake pkgconfig doxygen ];
+
+  outputs = [ "out" "dev" ];
+
+  postPatch = ''
+    NLOHMANN_SHA256=$(sha256sum ${nlohmann_json}/include/nlohmann/json.hpp | cut -f1 -d' ')
+    sed -e 's,https://github.com/nlohmann/json/releases/download/.*,file://${nlohmann_json}/include/nlohmann/json.hpp"),' \
+        -e "s,JSON_SHA256 .*,JSON_SHA256 ''${NLOHMANN_SHA256}," \
+        -i cmake/DownloadNlohmannJson.cmake
+
+    sed -e 's,https://github.com/googleapis/googleapis/archive/${googleapis_rev}.tar.gz,file://${googleapis},' \
+        -i cmake/external/googleapis.cmake
+
+    # Fixup the library path. It would build a path like /build/external//nix/store/…-foo/lib/foo.so for each library instead of /build/external/lib64/foo.so
+    sed -e 's,''${CMAKE_INSTALL_LIBDIR},lib64,g' \
+        -e 's,;lib64,lib,g' \
+        -i cmake/ExternalProjectHelper.cmake
+  '';
+
+  preFixup = ''
+    mv --no-clobber $out/lib64/cmake/* $out/lib/cmake
+    mv --no-clobber $out/lib64/pkgconfig/* $out/lib/pkgconfig
+    rmdir $out/lib64/cmake $out/lib64/pkgconfig
+    find $out/lib64
+
+    for file in $out/lib/pkgconfig/*; do
+      sed -e 's,\''${prefix}//,/,g' -i $file
+    done
+  '';
+
+  cmakeFlags = [
+    "-DGOOGLE_CLOUD_CPP_BIGTABLE_ENABLE_INSTALL=no"
+    "-DGOOGLE_CLOUD_CPP_DEPENDENCY_PROVIDER=package"
+    "-DGOOGLE_CLOUD_CPP_GOOGLEAPIS_PROVIDER=external"
+    "-DBUILD_SHARED_LIBS:BOOL=ON"
+    "-DGOOGLE_CLOUD_CPP_INSTALL_RPATH=$(out)/lib"
+  ];
+
+  meta = with stdenv.lib; {
+    license = with licenses; [ asl20 ];
+    homepage = https://github.com/googleapis/google-cloud-cpp;
+    description = "C++ Idiomatic Clients for Google Cloud Platform services";
+    maintainers = with maintainers; [ andir ];
+  };
+}

pkgs/development/libraries/hunspell/0001-Make-hunspell-look-in-XDG_DATA_DIRS-for-dictionaries.patch

@@ -0,0 +1,37 @@
+From 8c67f314de2684d77315eecd99ef091d441f17dd Mon Sep 17 00:00:00 2001
+From: Matthew Bauer <mjbauer95@gmail.com>
+Date: Wed, 24 Jul 2019 15:35:18 -0400
+Subject: [PATCH] Make hunspell look in XDG_DATA_DIRS for dictionaries
+
+Some dictionaries may exist but only show up under XDG_DATA_DIRS. For
+instance, $HOME/.local/share/hunspell could contain some dictionaries.
+
+This patch adds each directory in the hunspell subdir of each
+XDG_DATA_DIRS to the lookup path.
+
+Upstream pr is available at: https://github.com/hunspell/hunspell/pull/637
+---
+ src/tools/hunspell.cxx | 7 +++++++
+ 1 file changed, 7 insertions(+)
+
+diff --git a/src/tools/hunspell.cxx b/src/tools/hunspell.cxx
+index 690e34a..6cd127e 100644
+--- a/src/tools/hunspell.cxx
++++ b/src/tools/hunspell.cxx
+@@ -2044,6 +2044,13 @@ int main(int argc, char** argv) {
+     if (getenv("DICPATH")) {
+       path_std_str.append(getenv("DICPATH")).append(PATHSEP);
+     }
++    if (getenv("XDG_DATA_DIRS")) {
++      char* dir = strtok(getenv("XDG_DATA_DIRS"), ":");
++      while (dir != NULL) {
++        path_std_str.append(dir).append("/hunspell:");
++        dir = strtok(NULL, ":");
++      }
++    }
+     path_std_str.append(LIBDIR).append(PATHSEP);
+     if (HOME) {
+       const char * userooodir[] = USEROOODIR;
+-- 
+2.22.0
+

pkgs/development/libraries/hunspell/default.nix

@@ -14,6 +14,8 @@ stdenv.mkDerivation rec {
   buildInputs = [ ncurses readline ];
   nativeBuildInputs = [ autoreconfHook ];
 
+  patches = [ ./0001-Make-hunspell-look-in-XDG_DATA_DIRS-for-dictionaries.patch ];
+
   postPatch = ''
     patchShebangs tests
   '';

pkgs/development/libraries/hunspell/dictionaries.nix

@@ -286,10 +286,11 @@ let
       };
     };
 
-in {
+in rec {
 
   /* ENGLISH */
 
+  en_US = en-us;
   en-us = mkDictFromWordlist {
     shortName = "en-us";
     shortDescription = "English (United States)";
@@ -300,6 +301,7 @@ in {
     };
   };
 
+  en_CA = en-ca;
   en-ca = mkDictFromWordlist {
     shortName = "en-ca";
     shortDescription = "English (Canada)";
@@ -310,6 +312,7 @@ in {
     };
   };
 
+  en_GB-ise = en-gb-ise;
   en-gb-ise = mkDictFromWordlist {
     shortName = "en-gb-ise";
     shortDescription = "English (United Kingdom, 'ise' ending)";
@@ -320,6 +323,7 @@ in {
     };
   };
 
+  en_GB-ize = en-gb-ize;
   en-gb-ize = mkDictFromWordlist {
     shortName = "en-gb-ize";
     shortDescription = "English (United Kingdom, 'ize' ending)";
@@ -332,126 +336,147 @@ in {
 
   /* SPANISH */
 
+  es_ANY = es-any;
   es-any = mkDictFromRla {
     shortName = "es-any";
     shortDescription = "Spanish (any variant)";
     dictFileName = "es_ANY";
   };
 
+  es_AR = es-ar;
   es-ar = mkDictFromRla {
     shortName = "es-ar";
     shortDescription = "Spanish (Argentina)";
     dictFileName = "es_AR";
   };
 
+  es_BO = es-bo;
   es-bo = mkDictFromRla {
     shortName = "es-bo";
     shortDescription = "Spanish (Bolivia)";
     dictFileName = "es_BO";
   };
 
+  es_CL = es-cl;
   es-cl = mkDictFromRla {
     shortName = "es-cl";
     shortDescription = "Spanish (Chile)";
     dictFileName = "es_CL";
   };
 
+  es_CO = es-co;
   es-co = mkDictFromRla {
     shortName = "es-co";
     shortDescription = "Spanish (Colombia)";
     dictFileName = "es_CO";
   };
 
+  es_CR = es-cr;
   es-cr = mkDictFromRla {
     shortName = "es-cr";
     shortDescription = "Spanish (Costra Rica)";
     dictFileName = "es_CR";
   };
 
+  es_CU = es-cu;
   es-cu = mkDictFromRla {
     shortName = "es-cu";
     shortDescription = "Spanish (Cuba)";
     dictFileName = "es_CU";
   };
 
+  es_DO = es-do;
   es-do = mkDictFromRla {
     shortName = "es-do";
     shortDescription = "Spanish (Dominican Republic)";
     dictFileName = "es_DO";
   };
 
+  es_EC = es-ec;
   es-ec = mkDictFromRla {
     shortName = "es-ec";
     shortDescription = "Spanish (Ecuador)";
     dictFileName = "es_EC";
   };
 
+  es_ES = es-es;
   es-es = mkDictFromRla {
     shortName = "es-es";
     shortDescription = "Spanish (Spain)";
     dictFileName = "es_ES";
   };
 
+  es_GT = es-gt;
   es-gt = mkDictFromRla {
     shortName = "es-gt";
     shortDescription = "Spanish (Guatemala)";
     dictFileName = "es_GT";
   };
 
+  es_HN = es-hn;
   es-hn = mkDictFromRla {
     shortName = "es-hn";
     shortDescription = "Spanish (Honduras)";
     dictFileName = "es_HN";
   };
 
+  es_MX = es-mx;
   es-mx = mkDictFromRla {
     shortName = "es-mx";
     shortDescription = "Spanish (Mexico)";
     dictFileName = "es_MX";
   };
 
+  es_NI = es-ni;
   es-ni = mkDictFromRla {
     shortName = "es-ni";
     shortDescription = "Spanish (Nicaragua)";
     dictFileName = "es_NI";
   };
 
+  es_PA = es-pa;
   es-pa = mkDictFromRla {
     shortName = "es-pa";
     shortDescription = "Spanish (Panama)";
     dictFileName = "es_PA";
   };
 
+  es_PE = es-pe;
   es-pe = mkDictFromRla {
     shortName = "es-pe";
     shortDescription = "Spanish (Peru)";
     dictFileName = "es_PE";
   };
 
+  es_PR = es-pr;
   es-pr = mkDictFromRla {
     shortName = "es-pr";
     shortDescription = "Spanish (Puerto Rico)";
     dictFileName = "es_PR";
   };
 
+  es_PY = es-py;
   es-py = mkDictFromRla {
     shortName = "es-py";
     shortDescription = "Spanish (Paraguay)";
     dictFileName = "es_PY";
   };
 
+  es_SV = es-sv;
   es-sv = mkDictFromRla {
     shortName = "es-sv";
     shortDescription = "Spanish (El Salvador)";
     dictFileName = "es_SV";
   };
 
+  es_UY = es-uy;
   es-uy = mkDictFromRla {
     shortName = "es-uy";
     shortDescription = "Spanish (Uruguay)";
     dictFileName = "es_UY";
   };
 
+  es_VE = es-ve;
   es-ve = mkDictFromRla {
     shortName = "es-ve";
     shortDescription = "Spanish (Venezuela)";
@@ -505,6 +530,7 @@ in {
 
   /* ITALIAN */
 
+  it_IT = it-it;
   it-it =  mkDictFromLinguistico rec {
     shortName = "it-it";
     dictFileName = "it_IT";
@@ -517,6 +543,7 @@ in {
 
   /* BASQUE */
 
+  eu_ES = eu-es;
   eu-es = mkDictFromXuxen {
     shortName = "eu-es";
     dictFileName = "eu_ES";
@@ -549,6 +576,7 @@ in {
 
   /* HUNGARIAN */
 
+  hu_HU = hu-hu;
   hu-hu = mkDictFromLibreOffice {
     shortName = "hu-hu";
     dictFileName = "hu_HU";
@@ -557,7 +585,8 @@ in {
   };
 
   /* SWEDISH */
-  
+
+  sv_SE = sv-se;
   sv-se = mkDictFromDSSO rec {
     shortName = "sv-se";
     dictFileName = "sv_SE";
@@ -565,26 +594,30 @@ in {
   };
 
   # Finlandian Swedish (hello Linus Torvalds)
+  sv_FI = sv-fi;
   sv-fi = mkDictFromDSSO rec {
     shortName = "sv-fi";
     dictFileName = "sv_FI";
     shortDescription = "Swedish (Finland)";
   };
-  
+
   /* GERMAN */
 
+  de_DE = de-de;
   de-de = mkDictFromJ3e {
     shortName = "de-de";
     shortDescription = "German (Germany)";
     dictFileName = "de_DE";
   };
 
+  de_AT = de-at;
   de-at = mkDictFromJ3e {
     shortName = "de-at";
     shortDescription = "German (Austria)";
     dictFileName = "de_AT";
   };
 
+  de_CH = de-ch;
   de-ch = mkDictFromJ3e {
     shortName = "de-ch";
     shortDescription = "German (Switzerland)";
@@ -593,6 +626,7 @@ in {
 
   /* UKRAINIAN */
 
+  uk_UA = uk-ua;
   uk-ua = mkDict rec {
     name = "hunspell-dict-uk-ua-${version}";
     version = "4.2.5";