From ee1896d63dec108be02489f73b677ace1c656a74 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Robert=20Sch=C3=BCtz?= Date: Sat, 31 Mar 2018 20:43:32 +0200 Subject: [PATCH] pythonPackages.nipype: enable tests --- .../python-modules/nipype/default.nix | 18 +++++++++++++++--- 1 file changed, 15 insertions(+), 3 deletions(-) diff --git a/pkgs/development/python-modules/nipype/default.nix b/pkgs/development/python-modules/nipype/default.nix index 2ea6a10a5533..668e34a22476 100644 --- a/pkgs/development/python-modules/nipype/default.nix +++ b/pkgs/development/python-modules/nipype/default.nix @@ -21,8 +21,12 @@ , simplejson , traits , xvfbwrapper +, pytestcov +, codecov # other dependencies , which +, bash +, glibcLocales }: assert !isPy3k -> configparser != null; @@ -39,9 +43,11 @@ buildPythonPackage rec { # see https://github.com/nipy/nipype/issues/2240 patches = [ ./prov-version.patch ]; - doCheck = false; # fails with TypeError: None is not callable - checkInputs = [ which ]; - buildInputs = [ pytest mock ]; # required in installPhase + postPatch = '' + substituteInPlace nipype/interfaces/base/tests/test_core.py \ + --replace "/usr/bin/env bash" "${bash}/bin/bash" + ''; + propagatedBuildInputs = [ click dateutil @@ -62,6 +68,12 @@ buildPythonPackage rec { configparser ]; + checkInputs = [ pytest mock pytestcov codecov which glibcLocales ]; + + checkPhase = '' + LC_ALL="en_US.UTF-8" py.test -v --doctest-modules nipype + ''; + meta = with stdenv.lib; { homepage = http://nipy.org/nipype/; description = "Neuroimaging in Python: Pipelines and Interfaces";