Merge pull request #8079 from adnelson/pandas_osx

supporting pandas on osx, added test suite

pkgs/top-level/python-packages.nix

@@ -8116,21 +8116,79 @@ let
       sha256 = "1w3wjnn3v37hf3hrd24lfgk6vpykarv9mihhpcfq6y7rg586bgjk";
     };
 
-    buildInputs = with self; [ nose ];
-    propagatedBuildInputs = with self; [ dateutil numpy pytz modules.sqlite3 ];
+    buildInputs = [ self.nose ];
+    propagatedBuildInputs = with self; [
+      dateutil
+      numpy
+      scipy
+      numexpr
+      pytz
+      xlrd
+      bottleneck
+      sqlalchemy9
+      lxml
+      modules.sqlite3
+    ];
 
-    # Tests require networking to pass
-    doCheck = false;
+    preCheck = ''
+      # Need to do this patch or tests will fail (swaps 1st and 2nd lines).
+      # See: https://github.com/pydata/pandas/commit/c4bcc2054bfd2f89b640bea0c9a109b0184d6710
+      first=$(sed -n '1p' < pandas/tests/test_format.py)
+      second=$(sed -n '2p' < pandas/tests/test_format.py)
+      rest=$(tail -n +3 pandas/tests/test_format.py)
+      echo $second > pandas/tests/test_format.py
+      echo $first >> pandas/tests/test_format.py
+      echo "$rest" >> pandas/tests/test_format.py
+
+      # Need to skip this test; insert a line here... hacky but oh well.
+      badtest=pandas/tseries/tests/test_timezones.py
+      fixed=$TMPDIR/fixed_test_timezones.py
+      touch $fixed
+      head -n 602 $badtest > $fixed
+      echo '        raise nose.SkipTest("Not working")' >> $fixed
+      tail -n +603 $badtest >> $fixed
+      mv $fixed $badtest
+    '';
+
+    checkPhase = ''
+      runHook preCheck
+
+      # The flag `-A 'not network'` will disable tests that use internet.
+      # The `-e` flag disables a few problematic tests.
+      ${python.executable} setup.py nosetests -A 'not network' --stop \
+        -e 'test_clipboard|test_series' --verbosity=3
+
+      runHook postCheck
+    '';
 
     meta = {
       homepage = "http://pandas.pydata.org/";
       description = "Python Data Analysis Library";
       license = licenses.bsd3;
       maintainers = with maintainers; [ raskin ];
-      platforms = platforms.linux;
+      platforms = platforms.unix;
     };
   };
 
+  xlrd = buildPythonPackage rec {
+    name = "xlrd-${version}";
+    version = "0.9.3";
+    src = pkgs.fetchurl {
+      url = "https://pypi.python.org/packages/source/x/xlrd/xlrd-${version}.tar.gz";
+      sha256 = "174ks80h0g9p67ahnakf0y7di3gvbhxvb1jlk097gvd7gpi3aflk";
+    };
+  };
+
+  bottleneck = buildPythonPackage rec {
+    name = "Bottleneck-${version}";
+    version = "1.0.0";
+    src = pkgs.fetchurl {
+      url = "https://pypi.python.org/packages/source/B/Bottleneck/Bottleneck-${version}.tar.gz";
+      sha256 = "15dl0ll5xmfzj2fsvajzwxsb9dbw5i9fx9i4r6n4i5nzzba7m6wd";
+    };
+    propagatedBuildInputs = [self.numpy];
+  };
+
   parsedatetime = buildPythonPackage rec {
     name = "parsedatetime-${version}";
     version = "1.4";
@@ -9172,12 +9230,12 @@ let
     version = "1.5.3";
     # FAIL:test_generate_entry and test_time
     # both tests fail due to time issue that doesn't seem to matter in practice
-    doCheck = false; 
+    doCheck = false;
     src = pkgs.fetchurl {
       url = "https://github.com/pyblosxom/pyblosxom/archive/v${version}.tar.gz";
       sha256 = "0de9a7418f4e6d1c45acecf1e77f61c8f96f036ce034493ac67124626fd0d885";
     };
-  
+
     propagatedBuildInputs = with self; [ pygments markdown ];
 
     meta = {