python3Packages.tifffile: refactor
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@ -1,53 +1,55 @@
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{ lib
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, fetchPypi
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, buildPythonPackage
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, isPy27
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, isPy3k
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, dask
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, fetchPypi
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, fsspec
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, lxml
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, numpy
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, imagecodecs-lite
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, enum34 ? null
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, futures ? null
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, pathlib ? null
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, pytest
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, pytestCheckHook
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, pythonOlder
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, zarr
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}:
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buildPythonPackage rec {
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pname = "tifffile";
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version = "2021.11.2";
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format = "setuptools";
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disabled = pythonOlder "3.7";
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src = fetchPypi {
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inherit pname version;
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sha256 = "153e31fa1d892f482fabb2ae9f2561fa429ee42d01a6f67e58cee13637d9285b";
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hash = "sha256-FT4x+h2JL0gvq7KunyVh+kKe5C0BpvZ+WM7hNjfZKFs=";
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};
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patches = lib.optional isPy27 ./python2-regex-compat.patch;
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# Missing dependencies: imagecodecs, czifile, cmapfile, oiffile, lfdfiles
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# and test data missing from PyPI tarball
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doCheck = false;
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checkInputs = [
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pytest
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];
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checkPhase = ''
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pytest
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'';
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propagatedBuildInputs = [
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numpy
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] ++ lib.optionals isPy3k [
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imagecodecs-lite
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] ++ lib.optionals isPy27 [
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futures
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enum34
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pathlib
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];
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checkInputs = [
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dask
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fsspec
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lxml
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pytestCheckHook
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zarr
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];
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disabledTests = [
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# Test require network access
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"test_class_omexml"
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"test_write_ome"
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# Test file is missing
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"test_write_predictor"
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];
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pythonImportsCheck = [
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"tifffile"
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];
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meta = with lib; {
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description = "Read and write image data from and to TIFF files.";
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homepage = "https://www.lfd.uci.edu/~gohlke/";
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maintainers = [ maintainers.lebastr ];
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description = "Read and write image data from and to TIFF files";
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homepage = "https://github.com/cgohlke/tifffile/";
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license = licenses.bsd3;
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maintainers = with maintainers; [ lebastr ];
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};
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}
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