julia_13: julia-1.3.1 version bump
Added all-packages.nix
This commit is contained in:
Christoph Stich
parent
1144ee5538
commit
e4f65629db
168
pkgs/development/compilers/julia/1.3.nix
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168
pkgs/development/compilers/julia/1.3.nix
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@ -0,0 +1,168 @@
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{ stdenv, fetchurl, fetchzip, fetchFromGitHub
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# build tools
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, gfortran, m4, makeWrapper, patchelf, perl, which, python2
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, cmake
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# libjulia dependencies
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, libunwind, readline, utf8proc, zlib
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# standard library dependencies
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, curl, fftwSinglePrec, fftw, gmp, libgit2, mpfr, openlibm, openspecfun, pcre2
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# linear algebra
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, openblas, arpack
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# llvm
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, llvm
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}:
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with stdenv.lib;
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# All dependencies must use the same OpenBLAS.
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let
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arpack_ = arpack;
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in
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let
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arpack = arpack_.override { inherit openblas; };
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in
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let
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majorVersion = "1";
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minorVersion = "3";
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maintenanceVersion = "1";
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src_sha256 = "0q9a7yc3b235psrwl5ghyxgwly25lf8n818l8h6bkf2ymdbsv5p6";
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version = "${majorVersion}.${minorVersion}.${maintenanceVersion}";
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in
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stdenv.mkDerivation rec {
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pname = "julia";
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inherit version;
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src = fetchzip {
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url = "https://github.com/JuliaLang/julia/releases/download/v${majorVersion}.${minorVersion}.${maintenanceVersion}/julia-${majorVersion}.${minorVersion}.${maintenanceVersion}-full.tar.gz";
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sha256 = src_sha256;
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};
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prePatch = ''
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export PATH=$PATH:${cmake}/bin
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'';
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patches = [
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./use-system-utf8proc-julia-1.3.patch
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# Julia recompiles a precompiled file if the mtime stored *in* the
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# .ji file differs from the mtime of the .ji file. This
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# doesn't work in Nix because Nix changes the mtime of files in
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# the Nix store to 1. So patch Julia to accept mtimes of 1.
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./allow_nix_mtime.patch
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];
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postPatch = ''
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patchShebangs . contrib
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for i in backtrace cmdlineargs; do
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mv test/$i.jl{,.off}
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touch test/$i.jl
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done
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rm stdlib/Sockets/test/runtests.jl && touch stdlib/Sockets/test/runtests.jl
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rm stdlib/Distributed/test/runtests.jl && touch stdlib/Distributed/test/runtests.jl
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sed -e 's/Invalid Content-Type:/invalid Content-Type:/g' -i ./stdlib/LibGit2/test/libgit2.jl
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sed -e 's/Failed to resolve /failed to resolve /g' -i ./stdlib/LibGit2/test/libgit2.jl
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'';
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buildInputs = [
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arpack fftw fftwSinglePrec gmp libgit2 libunwind mpfr
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pcre2.dev openblas openlibm openspecfun readline utf8proc
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zlib
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]
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++ stdenv.lib.optionals stdenv.isDarwin [CoreServices ApplicationServices]
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;
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nativeBuildInputs = [ curl gfortran m4 makeWrapper patchelf perl python2 which ];
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makeFlags =
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let
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arch = head (splitString "-" stdenv.system);
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march = { x86_64 = stdenv.hostPlatform.platform.gcc.arch or "x86-64"; i686 = "pentium4"; }.${arch}
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or (throw "unsupported architecture: ${arch}");
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# Julia requires Pentium 4 (SSE2) or better
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cpuTarget = { x86_64 = "x86-64"; i686 = "pentium4"; }.${arch}
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or (throw "unsupported architecture: ${arch}");
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in [
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"ARCH=${arch}"
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"MARCH=${march}"
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"JULIA_CPU_TARGET=${cpuTarget}"
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"PREFIX=$(out)"
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"prefix=$(out)"
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"SHELL=${stdenv.shell}"
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"USE_SYSTEM_BLAS=1"
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"USE_BLAS64=${if openblas.blas64 then "1" else "0"}"
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"LIBBLAS=-lopenblas"
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"LIBBLASNAME=libopenblas"
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"USE_SYSTEM_LAPACK=1"
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"LIBLAPACK=-lopenblas"
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"LIBLAPACKNAME=libopenblas"
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"USE_SYSTEM_ARPACK=1"
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"USE_SYSTEM_FFTW=1"
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"USE_SYSTEM_GMP=1"
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"USE_SYSTEM_LIBGIT2=1"
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"USE_SYSTEM_LIBUNWIND=1"
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"USE_SYSTEM_MPFR=1"
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"USE_SYSTEM_OPENLIBM=1"
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"USE_SYSTEM_OPENSPECFUN=1"
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"USE_SYSTEM_PATCHELF=1"
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"USE_SYSTEM_PCRE=1"
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"PCRE_CONFIG=${pcre2.dev}/bin/pcre2-config"
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"PCRE_INCL_PATH=${pcre2.dev}/include/pcre2.h"
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"USE_SYSTEM_READLINE=1"
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"USE_SYSTEM_UTF8PROC=1"
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"USE_SYSTEM_ZLIB=1"
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"USE_BINARYBUILDER=0"
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];
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LD_LIBRARY_PATH = makeLibraryPath [
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arpack fftw fftwSinglePrec gmp libgit2 mpfr openblas openlibm
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openspecfun pcre2
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];
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enableParallelBuilding = true;
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doCheck = !stdenv.isDarwin;
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checkTarget = "testall";
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# Julia's tests require read/write access to $HOME
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preCheck = ''
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export HOME="$NIX_BUILD_TOP"
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'';
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preBuild = ''
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sed -e '/^install:/s@[^ ]*/doc/[^ ]*@@' -i Makefile
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sed -e '/[$](DESTDIR)[$](docdir)/d' -i Makefile
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export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}
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'';
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postInstall = ''
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# Symlink shared libraries from LD_LIBRARY_PATH into lib/julia,
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# as using a wrapper with LD_LIBRARY_PATH causes segmentation
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# faults when program returns an error:
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# $ julia -e 'throw(Error())'
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find $(echo $LD_LIBRARY_PATH | sed 's|:| |g') -maxdepth 1 -name '*.${if stdenv.isDarwin then "dylib" else "so"}*' | while read lib; do
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if [[ ! -e $out/lib/julia/$(basename $lib) ]]; then
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ln -sv $lib $out/lib/julia/$(basename $lib)
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fi
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done
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'';
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passthru = {
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inherit majorVersion minorVersion maintenanceVersion;
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site = "share/julia/site/v${majorVersion}.${minorVersion}";
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};
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meta = {
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description = "High-level performance-oriented dynamical language for technical computing";
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homepage = https://julialang.org/;
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license = stdenv.lib.licenses.mit;
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maintainers = with stdenv.lib.maintainers; [ raskin rob garrison ];
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platforms = [ "i686-linux" "x86_64-linux" "x86_64-darwin" ];
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broken = stdenv.isi686;
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};
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}
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@ -0,0 +1,24 @@
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---
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src/flisp/Makefile | 6 +++---
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1 file changed, 3 insertions(+), 3 deletions(-)
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diff --git a/src/flisp/Makefile b/src/flisp/Makefile
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index d97075e..6bebca7 100644
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--- a/src/flisp/Makefile
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+++ b/src/flisp/Makefile
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@@ -32,9 +32,9 @@ OBJS := $(SRCS:%.c=$(BUILDDIR)/%.o)
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DOBJS := $(SRCS:%.c=$(BUILDDIR)/%.dbg.obj)
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LLT_release := $(LLT_BUILDDIR)/libsupport.a
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LLT_debug := $(LLT_BUILDDIR)/libsupport-debug.a
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-LIBFILES_release := $(LLT_release) $(LIBUV) $(LIBUTF8PROC)
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-LIBFILES_debug := $(LLT_debug) $(LIBUV) $(LIBUTF8PROC)
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-LIBS :=
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+LIBFILES_release := $(LLT_release) $(LIBUV)
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+LIBFILES_debug := $(LLT_debug) $(LIBUV)
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+LIBS := $(LIBUTF8PROC)
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ifneq ($(OS),WINNT)
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LIBS += -lpthread
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endif
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--
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@ -8502,6 +8502,12 @@ in
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inherit (darwin.apple_sdk.frameworks) CoreServices ApplicationServices;
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};
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julia_13 = callPackage ../development/compilers/julia/1.3.nix {
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gmp = gmp6;
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openblas = openblasCompat;
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inherit (darwin.apple_sdk.frameworks) CoreServices ApplicationServices;
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};
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julia_1 = julia_10;
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julia = julia_1;
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