Merge master into staging-next

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github-actions[bot] 2023-11-03 12:01:07 +00:00 committed by GitHub
commit db0a71076b
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28 changed files with 284 additions and 57 deletions

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@ -10480,6 +10480,12 @@
githubId = 2487922;
name = "Lars Jellema";
};
ludat = {
email = "lucas6246@gmail.com";
github = "ludat";
githubId = 4952044;
name = "Lucas David Traverso";
};
ludo = {
email = "ludo@gnu.org";
github = "civodul";

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@ -90,7 +90,7 @@ in
description = mdDoc ''
Group policies to install.
See [Mozilla's documentation](https://github.com/mozilla/policy-templates/blob/master/README.md)
See [Mozilla's documentation](https://mozilla.github.io/policy-templates/)
for a list of available options.
This can be used to install extensions declaratively! Check out the

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@ -6,8 +6,6 @@ let
cfg = config.security.sudo;
inherit (pkgs) sudo;
toUserString = user: if (isInt user) then "#${toString user}" else "${user}";
toGroupString = group: if (isInt group) then "%#${toString group}" else "%${group}";
@ -247,7 +245,7 @@ in
};
};
environment.systemPackages = [ sudo ];
environment.systemPackages = [ cfg.package ];
security.pam.services.sudo = { sshAgentAuth = true; usshAuth = true; };

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@ -181,7 +181,18 @@ in {
# required to update the firmware of disks
services.udisks2.enable = true;
systemd.packages = [ cfg.package ];
systemd = {
packages = [ cfg.package ];
# fwupd-refresh expects a user that we do not create, so just run with DynamicUser
# instead and ensure we take ownership of /var/lib/fwupd
services.fwupd-refresh.serviceConfig = {
DynamicUser = true;
StateDirectory = "fwupd";
};
timers.fwupd-refresh.wantedBy = [ "timers.target" ];
};
security.polkit.enable = true;
};

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@ -2,11 +2,11 @@
stdenv.mkDerivation rec {
pname = "jpeginfo";
version = "1.7.0";
version = "1.7.1";
src = fetchurl {
url = "https://www.kokkonen.net/tjko/src/${pname}-${version}.tar.gz";
sha256 = "sha256-3JhQg0SNlwfULkm+2CaiR8Db2mkTyHDppdm/fHSTllk=";
sha256 = "sha256-J09r4j/Qib2ehxW2dkOmbKL2OlAwKL3qPlcSKNULZp4=";
};
buildInputs = [ libjpeg ];

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@ -3,6 +3,7 @@
, callPackage
, lib
, fetchFromGitHub
, fetchPypi
, python3
, substituteAll
, nix-update-script
@ -16,6 +17,30 @@ let
self = py;
packageOverrides = lib.foldr lib.composeExtensions (self: super: { }) (
[
(
# Due to flask > 2.3 the login will not work
self: super: {
werkzeug = super.werkzeug.overridePythonAttrs (oldAttrs: rec {
version = "2.2.3";
format = "setuptools";
src = fetchPypi {
pname = "Werkzeug";
inherit version;
hash = "sha256-LhzMlBfU2jWLnebxdOOsCUOR6h1PvvLWZ4ZdgZ39Cv4=";
};
});
flask = super.flask.overridePythonAttrs (oldAttrs: rec {
version = "2.2.5";
format = "setuptools";
src = fetchPypi {
pname = "Flask";
inherit version;
hash = "sha256-7e6bCn/yZiG9WowQ/0hK4oc3okENmbC7mmhQx/uXeqA=";
};
});
}
)
# Built-in dependency
(
self: super: {

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@ -1,38 +1,57 @@
{ lib, stdenv, fetchFromGitHub, fetchpatch, zlib, automake, autoconf, libtool }:
{ lib
, stdenv
, fetchFromGitHub
, fetchpatch
, zlib
, kssd
, runCommand
}:
stdenv.mkDerivation rec {
stdenv.mkDerivation (finalAttrs: {
pname = "kssd";
version = "1.1";
version = "2.21";
src = fetchFromGitHub {
owner = "yhg926";
repo = "public_kssd";
rev = "v${version}";
sha256 = "sha256-8jzYqo9LXF66pQ1EIusm+gba2VbTYpJz2K3NVlA3QxY=";
rev = "v${finalAttrs.version}";
hash = "sha256-D/s1jL2oKE0rSdRMVljskYFsw5UPOv1L95Of+K+e17w=";
};
patches = [
# Pull upstream patch for -fno-common toolchain support:
# https://github.com/yhg926/public_kssd/pull/9
# https://github.com/yhg926/public_kssd/pull/11
(fetchpatch {
name = "fno-common.patch";
url = "https://github.com/yhg926/public_kssd/commit/cdd1e8aae256146f5913a3b4c723b638d53bdf27.patch";
sha256 = "sha256-HhaTRqPfKR+ouh0PwEH6u22pbuqbX2OypRzw8BXm0W4=";
name = "allocate-enough-memory.patch";
url = "https://github.com/yhg926/public_kssd/commit/b1e66bbcc04687bc3201301cd742a0b26a87cb5d.patch";
hash = "sha256-yFyJetpsGKeu+H6Oxrmn5ea4ESVtblb3YJDja4JEAEM=";
})
];
nativeBuildInputs = [ autoconf automake ];
buildInputs = [ zlib libtool ];
buildInputs = [ zlib ];
installPhase = ''
install -vD kssd $out/bin/kssd
runHook preInstall
install -vD kssd $out/bin/kssd
runHook postInstall
'';
passthru.tests = {
simple = runCommand "${finalAttrs.pname}-test" { } ''
mkdir $out
${lib.getExe kssd} dist -L ${kssd.src}/shuf_file/L3K10.shuf -r ${kssd.src}/test_fna/seqs1 -o $out/reference
${lib.getExe kssd} dist -L ${kssd.src}/shuf_file/L3K10.shuf -o $out/query ${kssd.src}/test_fna/seqs2
${lib.getExe kssd} dist -r $out/reference -o $out/distout $out/query
'';
};
meta = with lib; {
description = "K-mer substring space decomposition";
license = licenses.asl20;
homepage = "https://github.com/yhg926/public_kssd";
maintainers = with maintainers; [ unode ];
platforms = [ "x86_64-linux" ];
platforms = platforms.linux;
mainProgram = "kssd";
};
}
})

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@ -8,14 +8,14 @@
stdenv.mkDerivation (finalAttrs: {
pname = "debianutils";
version = "5.13";
version = "5.14";
src = fetchFromGitLab {
domain = "salsa.debian.org";
owner = "debian";
repo = "debianutils";
rev = "debian/${finalAttrs.version}";
hash = "sha256-h6swRil0sldRaZT7/LMEmV6Ah3zoppiHeGO3xTJlrac=";
hash = "sha256-gbqtBFWq6KtmGLvGkmhpSHkpoDglfAT1KjDoZ4Y0SbI=";
};
nativeBuildInputs = [

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@ -0,0 +1,43 @@
{ lib
, python3Packages
, fetchFromGitHub
}:
python3Packages.buildPythonApplication rec {
pname = "dotbot";
version = "1.20.1";
pyproject = true;
src = fetchFromGitHub {
owner = "anishathalye";
repo = "dotbot";
rev = "v${version}";
hash = "sha256-Gy+LVGG/BAqXoM6GDuKBkGKxxAkmoYtBRA33y/ihdRE=";
};
preCheck = ''
patchShebangs bin/dotbot
'';
nativeBuildInputs = with python3Packages; [ setuptools ];
propagatedBuildInputs = with python3Packages; [ pyyaml ];
nativeCheckInputs = with python3Packages; [ pytestCheckHook ];
meta = with lib; {
description = "A tool that bootstraps your dotfiles";
longDescription = ''
Dotbot is designed to be lightweight and self-contained, with no external
dependencies and no installation required. Dotbot can also be a drop-in
replacement for any other tool you were using to manage your dotfiles, and
Dotbot is VCS-agnostic -- it doesn't make any attempt to manage your
dotfiles.
'';
homepage = "https://github.com/anishathalye/dotbot";
changelog =
"https://github.com/anishathalye/dotbot/blob/v${version}/CHANGELOG.md";
license = licenses.mit;
maintainers = with maintainers; [ ludat ];
};
}

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@ -0,0 +1,83 @@
{ lib
, stdenv
, fetchFromGitHub
, autoreconfHook
, pkg-config
, python3Packages # for tests
, openssl # for tests
, enableManpages ? true
, docutils # for manpages
}:
stdenv.mkDerivation (finalAttrs: {
pname = "eiwd";
version = "2.8-1";
src = fetchFromGitHub {
owner = "illiliti";
repo = "eiwd";
rev = finalAttrs.version;
hash = "sha256-SD/RJFuGBwFT4G73f93VrWO/6mGKQxjVhmNrpKRA/WY=";
fetchSubmodules = true;
};
outputs = [
"out" "doc"
] ++ lib.optionals enableManpages [
"man"
] ++ lib.optionals finalAttrs.doCheck [
"test"
];
postUnpack = ''
patchShebangs .
'';
nativeBuildInputs = [
autoreconfHook
pkg-config
] ++ lib.optionals enableManpages [
docutils # only for the man pages
];
checkInputs = [
python3Packages.python
(lib.getBin openssl)
];
configureFlags = [
"--disable-dbus"
] ++ lib.optionals (!enableManpages) [
"--disable-manual-pages"
];
enableParallelBuilding = true;
# override this to false if you don't want to build python3
doCheck = stdenv.hostPlatform == stdenv.buildPlatform;
# prevent the `install-data-local` Makefile rule from running;
# all it does is attempt to `mkdir` the `localstatedir`.
preInstall = ''
mkdir install-data-local
substituteInPlace Makefile --replace \
'$(MKDIR_P) -m 700 $(DESTDIR)$(daemon_storagedir)' \
'true'
'';
postInstall = ''
mkdir -p $doc/share/doc
cp -a doc $doc/share/doc/iwd
cp -a README AUTHORS TODO $doc/share/doc/iwd
'' + lib.optionalString finalAttrs.doCheck ''
mkdir -p $test/bin
cp -a test/* $test/bin/
'';
meta = with lib; {
homepage = "https://github.com/illiliti/eiwd/";
description = "Fork of iwd (wifi daemon) which does not require dbus";
license = licenses.lgpl21Plus;
platforms = platforms.linux;
};
})

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@ -1,4 +1,4 @@
{ lib, stdenv, fetchFromGitHub, cargo, rustc, autoreconfHook, jdk, glib, xulrunner, zip, pkg-config, npapi_sdk, bash, bc }:
{ lib, stdenv, fetchFromGitHub, cargo, rustc, autoreconfHook, jdk, glib, firefox-unwrapped, zip, pkg-config, npapi_sdk, bash, bc }:
stdenv.mkDerivation rec {
pname = "adoptopenjdk-icedtea-web";
@ -13,7 +13,7 @@ stdenv.mkDerivation rec {
};
nativeBuildInputs = [ autoreconfHook pkg-config bc ];
buildInputs = [ cargo rustc glib xulrunner zip npapi_sdk ];
buildInputs = [ cargo rustc glib firefox-unwrapped zip npapi_sdk ];
preConfigure = ''
configureFlagsArray+=("BIN_BASH=${bash}/bin/bash")

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@ -6,14 +6,14 @@
mkDerivation rec {
pname = "kquickimageeditor";
version = "0.2.0";
version = "0.3.0";
src = fetchFromGitLab {
domain = "invent.kde.org";
owner = "libraries";
repo = pname;
rev = "v${version}";
sha256 = "sha256-g7+BAWjpQBJPbrwnIwSudjBFtwaj4JKemV+BLfPzl4I=";
sha256 = "sha256-+BByt07HMb4u6j9bVZqkUPvyRaElKvJ2MjKlPakL87E=";
};
nativeBuildInputs = [ extra-cmake-modules ];

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@ -6,11 +6,11 @@
}:
mkDerivation rec {
pname = "kuserfeedback";
version = "1.2.0";
version = "1.3.0";
src = fetchurl {
url = "mirror://kde/stable/${pname}/${pname}-${version}.tar.xz";
hash = "sha256-dqrJIrFTJJsnRoCm9McsI47xTj3wS60Ay2QVixBj8mQ=";
hash = "sha256-JSMIuCLdRpDqhasWiMmw2lUSl4rGtDX3ell5/B0v/RM=";
};
nativeBuildInputs = [ extra-cmake-modules qttools ];

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@ -1,7 +1,7 @@
{ buildPecl, lib, rabbitmq-c, fetchFromGitHub }:
let
version = "1.11.0";
version = "2.1.1";
in buildPecl {
inherit version;
pname = "amqp";
@ -10,7 +10,7 @@ in buildPecl {
owner = "php-amqp";
repo = "php-amqp";
rev = "v${version}";
sha256 = "sha256-CDhNDk78D15MtljbtyYj8euPnCruLZnc2NEHqXDX8HY=";
sha256 = "sha256-QHiQL3INd0zQpmCOcJx7HhN770m9ql0Cs63OTOLOrNQ=";
};
buildInputs = [ rabbitmq-c ];

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@ -2,13 +2,13 @@
buildPecl rec {
pname = "phalcon";
version = "5.3.1";
version = "5.4.0";
src = fetchFromGitHub {
owner = "phalcon";
repo = "cphalcon";
rev = "v${version}";
hash = "sha256-FxGibpGlbNLqWDplCv4T4yUPg5US020niLfC7tHfkCU=";
hash = "sha256-svw+cYL5ISKk6jEvdFmLcC4hEzrFw3kIbDJsymt2tEs=";
};
internalDeps = [ php.extensions.session php.extensions.pdo ];

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@ -2,14 +2,14 @@
let
pname = "php-cs-fixer";
version = "3.34.1";
version = "3.37.1";
in
mkDerivation {
inherit pname version;
src = fetchurl {
url = "https://github.com/FriendsOfPHP/PHP-CS-Fixer/releases/download/v${version}/php-cs-fixer.phar";
sha256 = "sha256-wVqGINDvVr11QDamo1SHmkwKuDqu8GRDFBNsk3C7mt8=";
sha256 = "sha256-zKPkxHPF8StDgs1DC+WKVvo3VGzs+lJElRHliKUXtcw=";
};
dontUnpack = true;

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@ -2,14 +2,14 @@
let
pname = "phpcbf";
version = "3.7.1";
version = "3.7.2";
in
mkDerivation {
inherit pname version;
src = fetchurl {
url = "https://github.com/squizlabs/PHP_CodeSniffer/releases/download/${version}/phpcbf.phar";
sha256 = "sha256-yTwOg8vaIcIfhJzPD0tCl50gAEpaYXLtDqJw7Keub6g=";
sha256 = "sha256-TspzKpl98IpMl+QyZuuBIvkW05uwAqAAYA/dU5P07+E=";
};
dontUnpack = true;

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@ -1,7 +1,7 @@
{ buildPecl, lib, php, fetchFromGitHub }:
let
version = "6.0.1";
version = "6.0.2";
in buildPecl {
inherit version;
pname = "redis";
@ -10,7 +10,7 @@ in buildPecl {
repo = "phpredis";
owner = "phpredis";
rev = version;
hash = "sha256-0by0TC4TNFIzgMjoyuJG4EavMhkYqmn8TtRaVmgepfc=";
hash = "sha256-Ie31zak6Rqxm2+jGXWg6KN4czHe9e+190jZRQ5VoB+M=";
};
internalDeps = with php.extensions; [

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@ -0,0 +1,41 @@
{ lib
, buildPythonPackage
, fetchPypi
, setuptools
, numpy
, pandas
}:
buildPythonPackage rec {
pname = "prometheus-pandas";
version = "0.3.2";
pyproject = true;
src = fetchPypi {
inherit pname version;
hash = "sha256-zysdlYPjvhextAfW4vvGN6mSPVUbWLV+AvQ1hGWCAbw=";
};
nativeBuildInputs = [
setuptools
];
propagatedBuildInputs = [
numpy
pandas
];
# There are no tests. :(
doCheck = false;
pythonImportsCheck = [
"prometheus_pandas"
];
meta = with lib; {
homepage = "https://github.com/dcoles/prometheus-pandas";
license = licenses.mit;
description = "Pandas integration for Prometheus";
maintainers = with maintainers; [ viktornordling ];
};
}

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@ -8,7 +8,7 @@
}:
let
version = "2.6.0";
version = "2.9.0";
completion = fetchurl {
url = "https://raw.githubusercontent.com/wp-cli/wp-cli/v${version}/utils/wp-completion.bash";
@ -27,7 +27,7 @@ stdenv.mkDerivation rec {
src = fetchurl {
url = "https://github.com/wp-cli/wp-cli/releases/download/v${version}/${pname}-${version}.phar";
hash = "sha256-0WZSjKtgvIIpwGcp5wc4OPu6aNaytXRQTLAniDXIeIg=";
hash = "sha256-r2t8zCHtCQfLUE21oFnw4SAReQWmAXv91Ddc7jyT2GQ=";
};
nativeBuildInputs = [ installShellFiles makeWrapper ];

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@ -611,12 +611,12 @@ in rec {
tmux-fzf = mkTmuxPlugin {
pluginName = "tmux-fzf";
rtpFilePath = "main.tmux";
version = "unstable-2023-07-06";
version = "unstable-2023-10-24";
src = fetchFromGitHub {
owner = "sainnhe";
repo = "tmux-fzf";
rev = "51081a2688579228d860b3cb410f4437e857fc6e";
sha256 = "sha256-qElRHAbnZ+qRasvkfo+lKNahRHklvLOH0BmbQ1oyN6A=";
rev = "d62b6865c0e7c956ad1f0396823a6f34cf7452a7";
hash = "sha256-hVkSQYvBXrkXbKc98V9hwwvFp6z7/mX1K4N3N9j4NN4=";
};
postInstall = ''
find $target -type f -print0 | xargs -0 sed -i -e 's|fzf |${pkgs.fzf}/bin/fzf |g'

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@ -2,13 +2,13 @@
stdenv.mkDerivation rec {
pname = "iotop-c";
version = "1.24";
version = "1.25";
src = fetchFromGitHub {
owner = "Tomas-M";
repo = "iotop";
rev = "v${version}";
sha256 = "sha256-oSKNP/WY0Ivhj5LgyeerzZbleMcUn8ho0aqsiunqvyU=";
sha256 = "sha256-ZIvWdNxGSUmQtMKB/MVHEZ0fJ8b//zSXz+1r/P9ZDkE=";
};
nativeBuildInputs = [ pkg-config ];

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@ -11,9 +11,9 @@ let
};
# ./update-zen.py lqx
lqxVariant = {
version = "6.5.9"; #lqx
suffix = "lqx2"; #lqx
sha256 = "12l6z4bgrx5pf4fpcqsnzascr7f43cg1vwpayhgcwd7zimlbz1mg"; #lqx
version = "6.5.10"; #lqx
suffix = "lqx1"; #lqx
sha256 = "10bny5x2a3brfamyajvnl75h7s64vvmymgnvwgaq82q4bmsfcdd1"; #lqx
isLqx = true;
};
zenKernelsFor = { version, suffix, sha256, isLqx }: buildLinux (args // {

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@ -2,13 +2,13 @@
buildGoModule rec {
pname = "ergo";
version = "2.11.1";
version = "2.12.0";
src = fetchFromGitHub {
owner = "ergochat";
repo = "ergo";
rev = "v${version}";
sha256 = "sha256-LBKGwtprhtDHaghnU6YPQ4Pf2fqD8VN7OV9gzvFgLPY=";
sha256 = "sha256-n7GJpR/zUsHxTeVmHfBTjMcMAN7ri3FDvJSkKMzPe2I=";
};
vendorHash = null;

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@ -6,16 +6,16 @@
}:
buildGoModule rec {
pname = "osv-scanner";
version = "1.4.1";
version = "1.4.3";
src = fetchFromGitHub {
owner = "google";
repo = pname;
rev = "v${version}";
hash = "sha256-xc9qdzdJYg12twjLAGw1GEkfkFsk8UBgzSyOSg/FB20=";
hash = "sha256-PLLpWr1cc+JY2N1PwlKmHw5J3F7txM4uXcu/vjGhp8o=";
};
vendorHash = "sha256-e1XG3DZGDBKKcEpMBi0vqKo3f9TnXdFKOUzZ7KZhPAw=";
vendorHash = "sha256-fQQW52xog1L31wSIlnyHPyO1nEpjqrn+PtO2B9CWZH0=";
subPackages = [
"cmd/osv-scanner"

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@ -981,6 +981,7 @@ mapAliases ({
xineLib = xine-lib; # Added 2021-04-27
xineUI = xine-ui; # Added 2021-04-27
xtrt = throw "xtrt has been removed due to being abandoned"; # Added 2023-05-25
xulrunner = firefox-unwrapped; # Added 2023-11-03
xvfb_run = xvfb-run; # Added 2021-05-07
### Y ###

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@ -41692,8 +41692,6 @@ with pkgs;
tora = libsForQt5.callPackage ../development/tools/tora { };
xulrunner = firefox-unwrapped;
xrq = callPackage ../applications/misc/xrq { };
pynitrokey = callPackage ../tools/security/pynitrokey { };

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@ -9105,6 +9105,8 @@ self: super: with self; {
prodict = callPackage ../development/python-modules/prodict { };
prometheus-pandas = callPackage ../development/python-modules/prometheus-pandas { };
prophet = callPackage ../development/python-modules/prophet { };
propka = callPackage ../development/python-modules/propka { };