diff --git a/doc/meta.xml b/doc/meta.xml index 0f9dccfb91b5..356325991860 100644 --- a/doc/meta.xml +++ b/doc/meta.xml @@ -53,7 +53,7 @@ $ nix-env -qa hello --json "x86_64-linux", "armv5tel-linux", "armv7l-linux", - "mips64el-linux", + "mips32-linux", "x86_64-darwin", "i686-cygwin", "i686-freebsd", diff --git a/lib/maintainers.nix b/lib/maintainers.nix index 901875236f2a..a2aa88a807de 100644 --- a/lib/maintainers.nix +++ b/lib/maintainers.nix @@ -373,6 +373,7 @@ lasandell = "Luke Sandell "; lassulus = "Lassulus "; layus = "Guillaume Maudoux "; + lblasc = "Luka Blaskovic "; ldesgoui = "Lucas Desgouilles "; league = "Christopher League "; lebastr = "Alexander Lebedev "; @@ -671,6 +672,7 @@ stumoss = "Stuart Moss "; SuprDewd = "Bjarki Ágúst Guðmundsson "; suvash = "Suvash Thapaliya "; + svsdep = "Vasyl Solovei "; swarren83 = "Shawn Warren "; swflint = "Samuel W. Flint "; swistak35 = "Rafał Łasocha "; @@ -689,6 +691,7 @@ TealG = "Teal Gaure <~@Teal.Gr>"; teh = "Tom Hunger "; telotortium = "Robert Irelan "; + teozkr = "Teo Klestrup Röijezon "; teto = "Matthieu Coudron "; tex = "Milan Svoboda "; thall = "Niclas Thall "; @@ -713,6 +716,7 @@ treemo = "Matthieu Chevrier "; trevorj = "Trevor Joynson "; trino = "Hubert Mühlhans "; + troydm = "Dmitry Geurkov "; tstrobel = "Thomas Strobel <4ZKTUB6TEP74PYJOPWIR013S2AV29YUBW5F9ZH2F4D5UMJUJ6S@hash.domains>"; ttuegel = "Thomas Tuegel "; tv = "Tomislav Viljetić "; diff --git a/lib/systems/default.nix b/lib/systems/default.nix index 0729cc7ef293..d5a206e620c8 100644 --- a/lib/systems/default.nix +++ b/lib/systems/default.nix @@ -23,13 +23,15 @@ rec { config = parse.tripleFromSystem final.parsed; # Just a guess, based on `system` platform = platforms.selectBySystem final.system; + # Derived meta-data libc = - /**/ if final.isDarwin then "libSystem" - else if final.isMinGW then "msvcrt" - else if final.isMusl then "musl" - else if final.isLinux /* default */ then "glibc" + /**/ if final.isDarwin then "libSystem" + else if final.isMinGW then "msvcrt" + else if final.isMusl then "musl" + else if final.isAndroid then "bionic" + else if final.isLinux /* default */ then "glibc" # TODO(@Ericson2314) think more about other operating systems - else "native/impure"; + else "native/impure"; extensions = { sharedLibrary = /**/ if final.isDarwin then ".dylib" @@ -39,7 +41,10 @@ rec { /**/ if final.isWindows then ".exe" else ""; }; + # Misc boolean options + useAndroidPrebuilt = false; } // mapAttrs (n: v: v final.parsed) inspect.predicates // args; - in final; + in assert final.useAndroidPrebuilt -> final.isAndroid; + final; } diff --git a/lib/systems/doubles.nix b/lib/systems/doubles.nix index f39bfff13dec..20294a28a110 100644 --- a/lib/systems/doubles.nix +++ b/lib/systems/doubles.nix @@ -9,7 +9,7 @@ let "aarch64-linux" "armv5tel-linux" "armv6l-linux" "armv7l-linux" - "mips64el-linux" + "mipsel-linux" "i686-cygwin" "i686-freebsd" "i686-linux" "i686-netbsd" "i686-openbsd" diff --git a/lib/systems/examples.nix b/lib/systems/examples.nix index bd68ee9460e7..848737700b0b 100644 --- a/lib/systems/examples.nix +++ b/lib/systems/examples.nix @@ -38,6 +38,13 @@ rec { platform = platforms.aarch64-multiplatform; }; + aarch64-android-prebuilt = rec { + config = "aarch64-unknown-linux-android"; + arch = "aarch64"; + platform = platforms.aarch64-multiplatform; + useAndroidPrebuilt = true; + }; + scaleway-c1 = armv7l-hf-multiplatform // rec { platform = platforms.scaleway-c1; inherit (platform.gcc) fpu; @@ -51,7 +58,7 @@ rec { }; fuloongminipc = rec { - config = "mips64el-unknown-linux-gnu"; + config = "mipsel-unknown-linux-gnu"; arch = "mips"; float = "hard"; platform = platforms.fuloong2f_n32; diff --git a/lib/systems/inspect.nix b/lib/systems/inspect.nix index 0fce5254dcb4..ab220af46e30 100644 --- a/lib/systems/inspect.nix +++ b/lib/systems/inspect.nix @@ -34,7 +34,15 @@ rec { Cygwin = { kernel = kernels.windows; abi = abis.cygnus; }; MinGW = { kernel = kernels.windows; abi = abis.gnu; }; + Android = [ { abi = abis.android; } { abi = abis.androideabi; } ]; Musl = with abis; map (a: { abi = a; }) [ musl musleabi musleabihf ]; + + Kexecable = map (family: { kernel = kernels.linux; cpu.family = family; }) + [ "x86" "arm" "aarch64" "mips" ]; + Efi = map (family: { cpu.family = family; }) + [ "x86" "arm" "aarch64" ]; + Seccomputable = map (family: { kernel = kernels.linux; cpu.family = family; }) + [ "x86" "arm" "aarch64" "mips" ]; }; matchAnyAttrs = patterns: diff --git a/lib/systems/parse.nix b/lib/systems/parse.nix index 95759b93ae08..03d052f5f192 100644 --- a/lib/systems/parse.nix +++ b/lib/systems/parse.nix @@ -75,7 +75,10 @@ rec { aarch64 = { bits = 64; significantByte = littleEndian; family = "aarch64"; }; i686 = { bits = 32; significantByte = littleEndian; family = "x86"; }; x86_64 = { bits = 64; significantByte = littleEndian; family = "x86"; }; - mips64el = { bits = 32; significantByte = littleEndian; family = "mips"; }; + mips = { bits = 32; significantByte = bigEndian; family = "mips"; }; + mipsel = { bits = 32; significantByte = littleEndian; family = "mips"; }; + mips64 = { bits = 64; significantByte = bigEndian; family = "mips"; }; + mips64el = { bits = 64; significantByte = littleEndian; family = "mips"; }; powerpc = { bits = 32; significantByte = bigEndian; family = "power"; }; riscv32 = { bits = 32; significantByte = littleEndian; family = "riscv"; }; riscv64 = { bits = 64; significantByte = littleEndian; family = "riscv"; }; @@ -173,6 +176,7 @@ rec { types.abi = enum (attrValues abis); abis = setTypes types.openAbi { + android = {}; cygnus = {}; gnu = {}; msvc = {}; diff --git a/lib/systems/platforms.nix b/lib/systems/platforms.nix index 9350a16017dd..f39e890fbf1c 100644 --- a/lib/systems/platforms.nix +++ b/lib/systems/platforms.nix @@ -561,6 +561,6 @@ rec { "armv6l-linux" = raspberrypi; "armv7l-linux" = armv7l-hf-multiplatform; "aarch64-linux" = aarch64-multiplatform; - "mips64el-linux" = fuloong2f_n32; + "mipsel-linux" = fuloong2f_n32; }.${system} or pcBase; } diff --git a/lib/tests/systems.nix b/lib/tests/systems.nix index 523fd3feb3b0..ffdd8ae929c8 100644 --- a/lib/tests/systems.nix +++ b/lib/tests/systems.nix @@ -16,7 +16,7 @@ in with lib.systems.doubles; lib.runTests { arm = assertTrue (mseteq arm [ "armv5tel-linux" "armv6l-linux" "armv7l-linux" ]); i686 = assertTrue (mseteq i686 [ "i686-linux" "i686-freebsd" "i686-netbsd" "i686-openbsd" "i686-cygwin" ]); - mips = assertTrue (mseteq mips [ "mips64el-linux" ]); + mips = assertTrue (mseteq mips [ "mipsel-linux" ]); x86_64 = assertTrue (mseteq x86_64 [ "x86_64-linux" "x86_64-darwin" "x86_64-freebsd" "x86_64-openbsd" "x86_64-netbsd" "x86_64-cygwin" "x86_64-solaris" ]); cygwin = assertTrue (mseteq cygwin [ "i686-cygwin" "x86_64-cygwin" ]); @@ -24,7 +24,7 @@ in with lib.systems.doubles; lib.runTests { freebsd = assertTrue (mseteq freebsd [ "i686-freebsd" "x86_64-freebsd" ]); gnu = assertTrue (mseteq gnu (linux /* ++ hurd ++ kfreebsd ++ ... */)); illumos = assertTrue (mseteq illumos [ "x86_64-solaris" ]); - linux = assertTrue (mseteq linux [ "i686-linux" "x86_64-linux" "armv5tel-linux" "armv6l-linux" "armv7l-linux" "aarch64-linux" "mips64el-linux" ]); + linux = assertTrue (mseteq linux [ "i686-linux" "x86_64-linux" "armv5tel-linux" "armv6l-linux" "armv7l-linux" "aarch64-linux" "mipsel-linux" ]); netbsd = assertTrue (mseteq netbsd [ "i686-netbsd" "x86_64-netbsd" ]); openbsd = assertTrue (mseteq openbsd [ "i686-openbsd" "x86_64-openbsd" ]); unix = assertTrue (mseteq unix (linux ++ darwin ++ freebsd ++ openbsd ++ netbsd ++ illumos)); diff --git a/maintainers/scripts/gnome.sh b/maintainers/scripts/gnome.sh deleted file mode 100755 index d44bda53f8d6..000000000000 --- a/maintainers/scripts/gnome.sh +++ /dev/null @@ -1,192 +0,0 @@ -#!/usr/bin/env bash - -set -o pipefail - -GNOME_FTP=ftp.gnome.org/pub/GNOME/sources - -# projects that don't follow the GNOME major versioning, or that we don't want to -# programmatically update -NO_GNOME_MAJOR="ghex gtkhtml gdm gucharmap" - -usage() { - echo "Usage: $0 || [major.minor]" >&2 - exit 0 -} - -if [ "$#" -lt 1 ]; then - usage -fi - -GNOME_TOP=pkgs/desktops/gnome-3 - -action=$1 - -# curl -l ftp://... doesn't work from my office in HSE, and I don't want to have -# any conversations with sysadmin. Somehow lftp works. -if [ "$FTP_CLIENT" = "lftp" ]; then - ls_ftp() { - lftp -c "open $1; cls" - } -else - ls_ftp() { - curl -s -l "$1"/ - } -fi - -find_project() { - exec find "$GNOME_TOP" -mindepth 2 -maxdepth 2 -type d "$@" -} - -show_project() { - local project=$1 - local majorVersion=$2 - local version= - - if [ -z "$majorVersion" ]; then - echo "Looking for available versions..." >&2 - local available_baseversions=$(ls_ftp ftp://${GNOME_FTP}/${project} | grep '[0-9]\.[0-9]' | sort -t. -k1,1n -k 2,2n) - if [ "$?" -ne 0 ]; then - echo "Project $project not found" >&2 - return 1 - fi - - echo -e "The following versions are available:\n ${available_baseversions[@]}" >&2 - echo -en "Choose one of them: " >&2 - read majorVersion - fi - - if echo "$majorVersion" | grep -q "[0-9]\+\.[0-9]\+\.[0-9]\+"; then - # not a major version - version=$majorVersion - majorVersion=$(echo "$majorVersion" | cut -d '.' -f 1,2) - fi - - local FTPDIR=${GNOME_FTP}/${project}/${majorVersion} - - #version=`curl -l ${FTPDIR}/ 2>/dev/null | grep LATEST-IS | sed -e s/LATEST-IS-//` - # gnome's LATEST-IS is broken. Do not trust it. - - if [ -z "$version" ]; then - local files=$(ls_ftp "${FTPDIR}") - declare -A versions - - for f in $files; do - case $f in - (LATEST-IS-*|*.news|*.changes|*.sha256sum|*.diff*): - ;; - ($project-*.*.9*.tar.*): - tmp=${f#$project-} - tmp=${tmp%.tar*} - echo "Ignored unstable version ${tmp}" >&2 - ;; - ($project-*.tar.*): - tmp=${f#$project-} - tmp=${tmp%.tar*} - versions[${tmp}]=1 - ;; - (*): - echo "UNKNOWN FILE $f" >&2 - ;; - esac - done - echo "Found versions ${!versions[@]}" >&2 - version=$(echo ${!versions[@]} | sed -e 's/ /\n/g' | sort -t. -k1,1n -k 2,2n -k 3,3n | tail -n1) - if [ -z "$version" ]; then - echo "No version available for major $majorVersion" >&2 - return 1 - fi - - echo "Latest version is: ${version}" >&2 - fi - - local name=${project}-${version} - echo "Fetching .sha256 file" >&2 - local sha256out=$(curl -s -f http://"${FTPDIR}"/"${name}".sha256sum) - - if [ "$?" -ne "0" ]; then - echo "Version not found" >&2 - return 1 - fi - - extensions=( "xz" "bz2" "gz" ) - echo "Choosing archive extension (known are ${extensions[@]})..." >&2 - for ext in ${extensions[@]}; do - if echo -e "$sha256out" | grep -q "\\.tar\\.${ext}$"; then - ext_pref=$ext - sha256=$(echo -e "$sha256out" | grep "\\.tar\\.${ext}$" | cut -f1 -d\ ) - break - fi - done - echo "Chosen ${ext_pref}, hash is ${sha256}" >&2 - - echo "# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = \"${project}-${version}\"; - - src = fetchurl { - url = mirror://gnome/sources/${project}/${majorVersion}/${project}-${version}.tar.${ext_pref}; - sha256 = \"${sha256}\"; - }; -}" - - return 0 -} - -update_project() { - local project=$1 - local majorVersion=$2 - - # find project in nixpkgs tree - projectPath=$(find_project -name "$project" -print) - if [ -z "$projectPath" ]; then - echo "Project $project not found under $GNOME_TOP" - exit 1 - fi - - src=$(show_project "$project" "$majorVersion") - - if [ "$?" -eq "0" ]; then - echo "Updating $projectPath/src.nix" >&2 - echo -e "$src" > "$projectPath"/src.nix - fi - - return 0 -} - -if [ "$action" = "update-all" ]; then - majorVersion=$2 - if [ -z "$majorVersion" ]; then - echo "No major version specified" >&2 - usage - fi - - # find projects - projects=$(find_project -exec basename '{}' \;) - for project in $projects; do - if echo "$NO_GNOME_MAJOR"|grep -q $project; then - echo "Skipping $project" - else - echo "= Updating $project to $majorVersion" >&2 - update_project "$project" "$majorVersion" - echo >&2 - fi - done -else - project=$2 - majorVersion=$3 - - if [ -z "$project" ]; then - echo "No project specified, exiting" >&2 - usage - fi - - if [ "$action" = show ]; then - show_project "$project" "$majorVersion" - elif [ "$action" = update ]; then - update_project "$project" "$majorVersion" - else - echo "Unknown action $action" >&2 - usage - fi -fi diff --git a/maintainers/scripts/update.nix b/maintainers/scripts/update.nix index 2035950da3e3..7c54821f66cb 100755 --- a/maintainers/scripts/update.nix +++ b/maintainers/scripts/update.nix @@ -1,5 +1,6 @@ { package ? null , maintainer ? null +, path ? null }: # TODO: add assert statements @@ -9,22 +10,24 @@ let pkgs = import ./../../default.nix { }; packagesWith = cond: return: set: - pkgs.lib.flatten - (pkgs.lib.mapAttrsToList - (name: pkg: - let - result = builtins.tryEval ( - if pkgs.lib.isDerivation pkg && cond name pkg - then [(return name pkg)] - else if pkg.recurseForDerivations or false || pkg.recurseForRelease or false - then packagesWith cond return pkg + pkgs.lib.unique + (pkgs.lib.flatten + (pkgs.lib.mapAttrsToList + (name: pkg: + let + result = builtins.tryEval ( + if pkgs.lib.isDerivation pkg && cond name pkg + then [(return name pkg)] + else if pkg.recurseForDerivations or false || pkg.recurseForRelease or false + then packagesWith cond return pkg + else [] + ); + in + if result.success then result.value else [] - ); - in - if result.success then result.value - else [] + ) + set ) - set ); packagesWithUpdateScriptAndMaintainer = maintainer': @@ -47,6 +50,14 @@ let (name: pkg: pkg) pkgs; + packagesWithUpdateScript = path: + let + attrSet = pkgs.lib.attrByPath (pkgs.lib.splitString "." path) null pkgs; + in + packagesWith (name: pkg: builtins.hasAttr "updateScript" pkg) + (name: pkg: pkg) + attrSet; + packageByName = name: let package = pkgs.lib.attrByPath (pkgs.lib.splitString "." name) null pkgs; @@ -63,6 +74,8 @@ let [ (packageByName package) ] else if maintainer != null then packagesWithUpdateScriptAndMaintainer maintainer + else if path != null then + packagesWithUpdateScript path else builtins.throw "No arguments provided.\n\n${helpText}"; @@ -76,7 +89,11 @@ let % nix-shell maintainers/scripts/update.nix --argstr package garbas - to run update script for specific package. + to run update script for specific package, or + + % nix-shell maintainers/scripts/update.nix --argstr path gnome3 + + to run update script for all package under an attribute path. ''; runUpdateScript = package: '' diff --git a/nixos/doc/manual/release-notes/rl-1803.xml b/nixos/doc/manual/release-notes/rl-1803.xml index ce58c4dc95b0..9f80dcc29341 100644 --- a/nixos/doc/manual/release-notes/rl-1803.xml +++ b/nixos/doc/manual/release-notes/rl-1803.xml @@ -80,6 +80,11 @@ has the following highlights: following incompatible changes: + + + sound.enable now defaults to false. + + Dollar signs in options under are @@ -239,6 +244,58 @@ following incompatible changes: here. + + + The Piwik analytics software was renamed to Matomo: + + + The package pkgs.piwik was renamed to pkgs.matomo. + + + The service services.piwik was renamed to services.matomo. + + + + The data directory /var/lib/piwik was renamed to /var/lib/matomo. + All files will be moved automatically on first startup, but you might need to adjust your backup scripts. + + + + + The default for the nginx configuration changed from + piwik.${config.networking.hostName} to + matomo.${config.networking.hostName}.${config.networking.domain} + if is set, + matomo.${config.networking.hostName} if it is not set. + If you change your , remember you'll need to update the + trustedHosts[] array in /var/lib/matomo/config/config.ini.php + as well. + + + + + The piwik user was renamed to matomo. + The service will adjust ownership automatically for files in the data directory. + If you use unix socket authentication, remember to give the new matomo user + access to the database and to change the username to matomo + in the [database] section of /var/lib/matomo/config/config.ini.php. + + + + + If you named your database `piwik`, you might want to rename it to `matomo` to keep things clean, + but this is neither enforced nor required. + + + + + + + + nodejs-4_x is end-of-life. + nodejs-4_x, nodejs-slim-4_x and nodePackages_4_x are removed. + + @@ -373,6 +430,13 @@ following incompatible changes: and stopJob provide an optional $user argument for that purpose. + + + Enabling bash completion on NixOS, programs.bash.enableCompletion, will now also enable + completion for the Nix command line tools by installing the + nix-bash-completions package. + + diff --git a/nixos/modules/config/no-x-libs.nix b/nixos/modules/config/no-x-libs.nix index e1c4d0d602af..d8980944adc0 100644 --- a/nixos/modules/config/no-x-libs.nix +++ b/nixos/modules/config/no-x-libs.nix @@ -28,13 +28,13 @@ with lib; nixpkgs.config.packageOverrides = pkgs: { dbus = pkgs.dbus.override { x11Support = false; }; - networkmanager_fortisslvpn = pkgs.networkmanager_fortisslvpn.override { withGnome = false; }; - networkmanager_l2tp = pkgs.networkmanager_l2tp.override { withGnome = false; }; - networkmanager_openconnect = pkgs.networkmanager_openconnect.override { withGnome = false; }; - networkmanager_openvpn = pkgs.networkmanager_openvpn.override { withGnome = false; }; - networkmanager_pptp = pkgs.networkmanager_pptp.override { withGnome = false; }; - networkmanager_vpnc = pkgs.networkmanager_vpnc.override { withGnome = false; }; - networkmanager_iodine = pkgs.networkmanager_iodine.override { withGnome = false; }; + networkmanager-fortisslvpn = pkgs.networkmanager-fortisslvpn.override { withGnome = false; }; + networkmanager-l2tp = pkgs.networkmanager-l2tp.override { withGnome = false; }; + networkmanager-openconnect = pkgs.networkmanager-openconnect.override { withGnome = false; }; + networkmanager-openvpn = pkgs.networkmanager-openvpn.override { withGnome = false; }; + networkmanager-pptp = pkgs.networkmanager-pptp.override { withGnome = false; }; + networkmanager-vpnc = pkgs.networkmanager-vpnc.override { withGnome = false; }; + networkmanager-iodine = pkgs.networkmanager-iodine.override { withGnome = false; }; pinentry = pkgs.pinentry_ncurses; }; }; diff --git a/nixos/modules/hardware/all-firmware.nix b/nixos/modules/hardware/all-firmware.nix index afaa65f6ce35..b61acf1815d9 100644 --- a/nixos/modules/hardware/all-firmware.nix +++ b/nixos/modules/hardware/all-firmware.nix @@ -37,8 +37,9 @@ in { hardware.firmware = with pkgs; [ firmwareLinuxNonfree intel2200BGFirmware - rtl8723bs-firmware rtl8192su-firmware + ] ++ optionals (versionOlder config.boot.kernelPackages.kernel.version "4.13") [ + rtl8723bs-firmware ]; }) (mkIf cfg.enableAllFirmware { diff --git a/nixos/modules/hardware/digitalbitbox.nix b/nixos/modules/hardware/digitalbitbox.nix new file mode 100644 index 000000000000..0888cfbef2a8 --- /dev/null +++ b/nixos/modules/hardware/digitalbitbox.nix @@ -0,0 +1,30 @@ +{ config, lib, pkgs, ... }: + +with lib; + +let + cfg = config.hardware.digitalbitbox; +in + +{ + options.hardware.digitalbitbox = { + enable = mkOption { + type = types.bool; + default = false; + description = '' + Enables udev rules for Digital Bitbox devices. + ''; + }; + + package = mkOption { + type = types.package; + default = pkgs.digitalbitbox; + defaultText = "pkgs.digitalbitbox"; + description = "The Digital Bitbox package to use. This can be used to install a package with udev rules that differ from the defaults."; + }; + }; + + config = mkIf cfg.enable { + services.udev.packages = [ cfg.package ]; + }; +} diff --git a/nixos/modules/installer/cd-dvd/installation-cd-graphical-gnome.nix b/nixos/modules/installer/cd-dvd/installation-cd-graphical-gnome.nix index 5725938465f5..4c4e69d60d9c 100644 --- a/nixos/modules/installer/cd-dvd/installation-cd-graphical-gnome.nix +++ b/nixos/modules/installer/cd-dvd/installation-cd-graphical-gnome.nix @@ -69,7 +69,7 @@ with lib; in '' mkdir -p /root/Desktop ln -sfT ${desktopFile} /root/Desktop/nixos-manual.desktop - cp ${pkgs.gnome3.gnome_terminal}/share/applications/gnome-terminal.desktop /root/Desktop/gnome-terminal.desktop + cp ${pkgs.gnome3.gnome-terminal}/share/applications/gnome-terminal.desktop /root/Desktop/gnome-terminal.desktop chmod a+rx /root/Desktop/gnome-terminal.desktop cp ${pkgs.gparted}/share/applications/gparted.desktop /root/Desktop/gparted.desktop chmod a+rx /root/Desktop/gparted.desktop diff --git a/nixos/modules/installer/tools/nixos-generate-config.pl b/nixos/modules/installer/tools/nixos-generate-config.pl index a82ee63fd0cd..0e0744a52e42 100644 --- a/nixos/modules/installer/tools/nixos-generate-config.pl +++ b/nixos/modules/installer/tools/nixos-generate-config.pl @@ -603,6 +603,10 @@ $bootLoaderConfig # Enable CUPS to print documents. # services.printing.enable = true; + # Enable sound. + # sound.enable = true; + # hardware.pulseaudio.enable = true; + # Enable the X11 windowing system. # services.xserver.enable = true; # services.xserver.layout = "us"; diff --git a/nixos/modules/misc/label.nix b/nixos/modules/misc/label.nix index 250914e8f82e..8e5e57b3b83b 100644 --- a/nixos/modules/misc/label.nix +++ b/nixos/modules/misc/label.nix @@ -65,8 +65,8 @@ in # This is set here rather than up there so that changing it would # not rebuild the manual system.nixos.label = mkDefault (maybeEnv "NIXOS_LABEL" - (concatStringsSep "-" (sort (x: y: x < y) cfg.tags) - + "-" + maybeEnv "NIXOS_LABEL_VERSION" cfg.version)); + (concatStringsSep "-" ((sort (x: y: x < y) cfg.tags) + ++ [ (maybeEnv "NIXOS_LABEL_VERSION" cfg.version) ]))); }; } diff --git a/nixos/modules/misc/nixpkgs.nix b/nixos/modules/misc/nixpkgs.nix index e747fbc6755c..11bd148d5dee 100644 --- a/nixos/modules/misc/nixpkgs.nix +++ b/nixos/modules/misc/nixpkgs.nix @@ -93,7 +93,7 @@ in default = {}; example = literalExample '' - { firefox.enableGeckoMediaPlayer = true; } + { allowBroken = true; allowUnfree = true; } ''; type = configType; description = '' diff --git a/nixos/modules/module-list.nix b/nixos/modules/module-list.nix index 098fac7a0c2d..13a32b968dcb 100644 --- a/nixos/modules/module-list.nix +++ b/nixos/modules/module-list.nix @@ -31,6 +31,7 @@ ./hardware/ckb.nix ./hardware/cpu/amd-microcode.nix ./hardware/cpu/intel-microcode.nix + ./hardware/digitalbitbox.nix ./hardware/sensor/iio.nix ./hardware/ksm.nix ./hardware/mcelog.nix @@ -78,6 +79,7 @@ ./programs/command-not-found/command-not-found.nix ./programs/criu.nix ./programs/dconf.nix + ./programs/digitalbitbox/default.nix ./programs/environment.nix ./programs/fish.nix ./programs/freetds.nix @@ -109,6 +111,7 @@ ./programs/sway.nix ./programs/thefuck.nix ./programs/tmux.nix + ./programs/udevil.nix ./programs/venus.nix ./programs/vim.nix ./programs/way-cooler.nix @@ -637,7 +640,7 @@ ./services/web-apps/nixbot.nix ./services/web-apps/nexus.nix ./services/web-apps/pgpkeyserver-lite.nix - ./services/web-apps/piwik.nix + ./services/web-apps/matomo.nix ./services/web-apps/pump.io.nix ./services/web-apps/restya-board.nix ./services/web-apps/tt-rss.nix diff --git a/nixos/modules/programs/bash/bash.nix b/nixos/modules/programs/bash/bash.nix index 1abdb4973a44..1a62f04972df 100644 --- a/nixos/modules/programs/bash/bash.nix +++ b/nixos/modules/programs/bash/bash.nix @@ -211,6 +211,9 @@ in "/share/bash-completion" ]; + environment.systemPackages = optional cfg.enableCompletion + pkgs.nix-bash-completions; + environment.shells = [ "/run/current-system/sw/bin/bash" "/var/run/current-system/sw/bin/bash" diff --git a/nixos/modules/programs/browserpass.nix b/nixos/modules/programs/browserpass.nix index a073c7e66eb8..5f8a44a9848e 100644 --- a/nixos/modules/programs/browserpass.nix +++ b/nixos/modules/programs/browserpass.nix @@ -18,5 +18,6 @@ with lib; "opt/chrome/native-messaging-hosts/com.dannyvankooten.browserpass.json".source = "${pkgs.browserpass}/etc/chrome-host.json"; "opt/chrome/policies/managed/com.dannyvankooten.browserpass.json".source = "${pkgs.browserpass}/etc/chrome-policy.json"; }; + nixpkgs.config.firefox.enableBrowserpass = true; }; } diff --git a/nixos/modules/programs/chromium.nix b/nixos/modules/programs/chromium.nix index 54739feab976..41c49db8c71c 100644 --- a/nixos/modules/programs/chromium.nix +++ b/nixos/modules/programs/chromium.nix @@ -36,6 +36,7 @@ in "chlffgpmiacpedhhbkiomidkjlcfhogd" # pushbullet "mbniclmhobmnbdlbpiphghaielnnpgdp" # lightshot "gcbommkclmclpchllfjekcdonpmejbdp" # https everywhere + "cjpalhdlnbpafiamejdnhcphjbkeiagm" # ublock origin ] ''; }; @@ -52,8 +53,7 @@ in description = "Chromium default search provider url."; default = null; example = - "https://encrypted.google.com/search?q={searchTerms}&{google:RLZ}{google:originalQueryForSuggestion}{google:assistedQueryStats}{google:searchFieldtrialParameter}{google: - ↪searchClient}{google:sourceId}{google:instantExtendedEnabledParameter}ie={inputEncoding}"; + "https://encrypted.google.com/search?q={searchTerms}&{google:RLZ}{google:originalQueryForSuggestion}{google:assistedQueryStats}{google:searchFieldtrialParameter}{google:searchClient}{google:sourceId}{google:instantExtendedEnabledParameter}ie={inputEncoding}"; }; defaultSearchProviderSuggestURL = mkOption { @@ -79,7 +79,11 @@ in ###### implementation config = lib.mkIf cfg.enable { + # for chromium environment.etc."chromium/policies/managed/default.json".text = builtins.toJSON defaultProfile; environment.etc."chromium/policies/managed/extra.json".text = builtins.toJSON cfg.extraOpts; + # for google-chrome https://www.chromium.org/administrators/linux-quick-start + environment.etc."opt/chrome/policies/managed/default.json".text = builtins.toJSON defaultProfile; + environment.etc."opt/chrome/policies/managed/extra.json".text = builtins.toJSON cfg.extraOpts; }; } diff --git a/nixos/modules/programs/dconf.nix b/nixos/modules/programs/dconf.nix index 27bfdf022e7d..b7d8a345e65c 100644 --- a/nixos/modules/programs/dconf.nix +++ b/nixos/modules/programs/dconf.nix @@ -36,7 +36,7 @@ in "${pkgs.gnome3.dconf.lib}/lib/gio/modules"; # https://github.com/NixOS/nixpkgs/pull/31891 #environment.variables.XDG_DATA_DIRS = optional cfg.enable - # "$(echo ${pkgs.gnome3.gsettings_desktop_schemas}/share/gsettings-schemas/gsettings-desktop-schemas-*)"; + # "$(echo ${pkgs.gnome3.gsettings-desktop-schemas}/share/gsettings-schemas/gsettings-desktop-schemas-*)"; }; } diff --git a/nixos/modules/programs/digitalbitbox/default.nix b/nixos/modules/programs/digitalbitbox/default.nix new file mode 100644 index 000000000000..7c727489c6c9 --- /dev/null +++ b/nixos/modules/programs/digitalbitbox/default.nix @@ -0,0 +1,39 @@ +{ config, lib, pkgs, ... }: + +with lib; + +let + cfg = config.programs.digitalbitbox; +in + +{ + options.programs.digitalbitbox = { + enable = mkOption { + type = types.bool; + default = false; + description = '' + Installs the Digital Bitbox application and enables the complementary hardware module. + ''; + }; + + package = mkOption { + type = types.package; + default = pkgs.digitalbitbox; + defaultText = "pkgs.digitalbitbox"; + description = "The Digital Bitbox package to use. This can be used to install a package with udev rules that differ from the defaults."; + }; + }; + + config = mkIf cfg.enable { + environment.systemPackages = [ cfg.package ]; + hardware.digitalbitbox = { + enable = true; + package = cfg.package; + }; + }; + + meta = { + doc = ./doc.xml; + maintainers = with stdenv.lib.maintainers; [ vidbina ]; + }; +} diff --git a/nixos/modules/programs/digitalbitbox/doc.xml b/nixos/modules/programs/digitalbitbox/doc.xml new file mode 100644 index 000000000000..7acbc2fc4dde --- /dev/null +++ b/nixos/modules/programs/digitalbitbox/doc.xml @@ -0,0 +1,85 @@ + + + Digital Bitbox + + + Digital Bitbox is a hardware wallet and second-factor authenticator. + + + + The digitalbitbox programs module may be + installed by setting programs.digitalbitbox + to true in a manner similar to + + + programs.digitalbitbox.enable = true; + + + and bundles the digitalbitbox package (see ), which contains the + dbb-app and dbb-cli binaries, + along with the hardware module (see ) which sets up the + necessary udev rules to access the device. + + + + Enabling the digitalbitbox module is pretty much the easiest way to + get a Digital Bitbox device working on your system. + + + + For more information, see + . + + +
+ Package + + + The binaries, dbb-app (a GUI tool) and + dbb-cli (a CLI tool), are available through the + digitalbitbox package which could be installed + as follows: + + + environment.systemPackages = [ + pkgs.digitalbitbox + ]; + + +
+ + +
+ Hardware + + + The digitalbitbox hardware package enables the udev rules for + Digital Bitbox devices and may be installed as follows: + + + hardware.digitalbitbox.enable = true; + + + + + In order to alter the udev rules, one may provide different values for + the udevRule51 and udevRule52 + attributes by means of overriding as follows: + + + programs.digitalbitbox = { + enable = true; + package = pkgs.digitalbitbox.override { + udevRule51 = "something else"; + }; + }; + + +
+
diff --git a/nixos/modules/programs/udevil.nix b/nixos/modules/programs/udevil.nix new file mode 100644 index 000000000000..ba5670f9dfe9 --- /dev/null +++ b/nixos/modules/programs/udevil.nix @@ -0,0 +1,14 @@ +{ config, lib, pkgs, ... }: + +with lib; + +let + cfg = config.programs.udevil; + +in { + options.programs.udevil.enable = mkEnableOption "udevil"; + + config = mkIf cfg.enable { + security.wrappers.udevil.source = "${lib.getBin pkgs.udevil}/bin/udevil"; + }; +} diff --git a/nixos/modules/rename.nix b/nixos/modules/rename.nix index da83baed3719..489d7d8b9b50 100644 --- a/nixos/modules/rename.nix +++ b/nixos/modules/rename.nix @@ -148,6 +148,12 @@ with lib; # parsoid (mkRemovedOptionModule [ "services" "parsoid" "interwikis" ] [ "services" "parsoid" "wikis" ]) + # piwik was renamed to matomo + (mkRenamedOptionModule [ "services" "piwik" "enable" ] [ "services" "matomo" "enable" ]) + (mkRenamedOptionModule [ "services" "piwik" "webServerUser" ] [ "services" "matomo" "webServerUser" ]) + (mkRenamedOptionModule [ "services" "piwik" "phpfpmProcessManagerConfig" ] [ "services" "matomo" "phpfpmProcessManagerConfig" ]) + (mkRenamedOptionModule [ "services" "piwik" "nginx" ] [ "services" "matomo" "nginx" ]) + # tarsnap (mkRemovedOptionModule [ "services" "tarsnap" "cachedir" ] "Use services.tarsnap.archives..cachedir") diff --git a/nixos/modules/security/pam.nix b/nixos/modules/security/pam.nix index f39f64033ca7..e1cad03e66e2 100644 --- a/nixos/modules/security/pam.nix +++ b/nixos/modules/security/pam.nix @@ -311,7 +311,7 @@ let ("auth optional ${pkgs.plasma5.kwallet-pam}/lib/security/pam_kwallet5.so" + " kwalletd=${pkgs.libsForQt5.kwallet.bin}/bin/kwalletd5")} ${optionalString cfg.enableGnomeKeyring - ("auth optional ${pkgs.gnome3.gnome_keyring}/lib/security/pam_gnome_keyring.so")} + ("auth optional ${pkgs.gnome3.gnome-keyring}/lib/security/pam_gnome_keyring.so")} ${optionalString cfg.googleAuthenticator.enable "auth required ${pkgs.googleAuthenticator}/lib/security/pam_google_authenticator.so no_increment_hotp"} '') + '' @@ -384,7 +384,7 @@ let ("session optional ${pkgs.plasma5.kwallet-pam}/lib/security/pam_kwallet5.so" + " kwalletd=${pkgs.libsForQt5.kwallet.bin}/bin/kwalletd5")} ${optionalString (cfg.enableGnomeKeyring) - "session optional ${pkgs.gnome3.gnome_keyring}/lib/security/pam_gnome_keyring.so auto_start"} + "session optional ${pkgs.gnome3.gnome-keyring}/lib/security/pam_gnome_keyring.so auto_start"} ${optionalString (config.virtualisation.lxc.lxcfs.enable) "session optional ${pkgs.lxcfs}/lib/security/pam_cgfs.so -c freezer,memory,name=systemd,unified,cpuset"} ''); diff --git a/nixos/modules/services/audio/alsa.nix b/nixos/modules/services/audio/alsa.nix index acf48d3c3d03..e3e8bb28c58b 100644 --- a/nixos/modules/services/audio/alsa.nix +++ b/nixos/modules/services/audio/alsa.nix @@ -21,7 +21,7 @@ in enable = mkOption { type = types.bool; - default = true; + default = false; description = '' Whether to enable ALSA sound. ''; diff --git a/nixos/modules/services/backup/crashplan-small-business.nix b/nixos/modules/services/backup/crashplan-small-business.nix index c6002b6a3f6b..9497d8c18bb7 100644 --- a/nixos/modules/services/backup/crashplan-small-business.nix +++ b/nixos/modules/services/backup/crashplan-small-business.nix @@ -23,7 +23,7 @@ with lib; example = "2G"; type = types.str; description = '' - Maximum amount of that the crashplan engine should use. + Maximum amount of ram that the crashplan engine should use. ''; }; openPorts = mkOption { @@ -52,28 +52,13 @@ with lib; after = [ "network.target" "local-fs.target" ]; preStart = '' - ensureDir() { - dir=$1 - mode=$2 - - if ! test -e $dir; then - ${pkgs.coreutils}/bin/mkdir -m $mode -p $dir - elif [ "$(${pkgs.coreutils}/bin/stat -c %a $dir)" != "$mode" ]; then - ${pkgs.coreutils}/bin/chmod $mode $dir - fi - } - - ensureDir ${crashplansb.vardir} 755 - ensureDir ${crashplansb.vardir}/conf 700 - ensureDir ${crashplansb.manifestdir} 700 - ensureDir ${crashplansb.vardir}/cache 700 - ensureDir ${crashplansb.vardir}/backupArchives 700 - ensureDir ${crashplansb.vardir}/log 777 + install -d -m 755 ${crashplansb.vardir} + install -d -m 700 ${crashplansb.vardir}/conf + install -d -m 700 ${crashplansb.manifestdir} + install -d -m 700 ${crashplansb.vardir}/cache + install -d -m 700 ${crashplansb.vardir}/backupArchives + install -d -m 777 ${crashplansb.vardir}/log cp -avn ${crashplansb}/conf.template/* ${crashplansb.vardir}/conf - #for x in bin install.vars lang lib libc42archive64.so libc42core.so libjniwrap64.so libjtux64.so libleveldb64.so libnetty-tcnative.so share upgrade; do - # rm -f ${crashplansb.vardir}/$x; - # ln -sf ${crashplansb}/$x ${crashplansb.vardir}/$x; - #done ''; serviceConfig = { diff --git a/nixos/modules/services/databases/mysql.nix b/nixos/modules/services/databases/mysql.nix index 5b7390503552..21a131b90a81 100644 --- a/nixos/modules/services/databases/mysql.nix +++ b/nixos/modules/services/databases/mysql.nix @@ -133,7 +133,7 @@ in ''; example = [ "nextcloud" - "piwik" + "matomo" ]; }; @@ -289,10 +289,10 @@ in # Create initial databases if ! test -e "${cfg.dataDir}/${database.name}"; then echo "Creating initial database: ${database.name}" - ( echo "create database `${database.name}`;" + ( echo 'create database `${database.name}`;' ${optionalString (database ? "schema") '' - echo "use `${database.name}`;" + echo 'use `${database.name}`;' if [ -f "${database.schema}" ] then diff --git a/nixos/modules/services/databases/postgresql.nix b/nixos/modules/services/databases/postgresql.nix index 9b5e3735239f..0dcbfe2e47ac 100644 --- a/nixos/modules/services/databases/postgresql.nix +++ b/nixos/modules/services/databases/postgresql.nix @@ -122,7 +122,7 @@ in extraPlugins = mkOption { type = types.listOf types.path; default = []; - example = literalExample "[ (pkgs.postgis.override { postgresql = pkgs.postgresql94; }).v_2_1_4 ]"; + example = literalExample "[ (pkgs.postgis.override { postgresql = pkgs.postgresql94; }) ]"; description = '' When this list contains elements a new store path is created. PostgreSQL and the elements are symlinked into it. Then pg_config, diff --git a/nixos/modules/services/desktops/gnome3/at-spi2-core.nix b/nixos/modules/services/desktops/gnome3/at-spi2-core.nix index 9e382241348b..cca98c43dc7a 100644 --- a/nixos/modules/services/desktops/gnome3/at-spi2-core.nix +++ b/nixos/modules/services/desktops/gnome3/at-spi2-core.nix @@ -30,9 +30,9 @@ with lib; config = mkMerge [ (mkIf config.services.gnome3.at-spi2-core.enable { - environment.systemPackages = [ pkgs.at_spi2_core ]; - services.dbus.packages = [ pkgs.at_spi2_core ]; - systemd.packages = [ pkgs.at_spi2_core ]; + environment.systemPackages = [ pkgs.at-spi2-core ]; + services.dbus.packages = [ pkgs.at-spi2-core ]; + systemd.packages = [ pkgs.at-spi2-core ]; }) (mkIf (!config.services.gnome3.at-spi2-core.enable) { diff --git a/nixos/modules/services/desktops/gnome3/evolution-data-server.nix b/nixos/modules/services/desktops/gnome3/evolution-data-server.nix index 86a47488d865..7e312a1b81eb 100644 --- a/nixos/modules/services/desktops/gnome3/evolution-data-server.nix +++ b/nixos/modules/services/desktops/gnome3/evolution-data-server.nix @@ -30,11 +30,11 @@ with lib; config = mkIf config.services.gnome3.evolution-data-server.enable { - environment.systemPackages = [ pkgs.gnome3.evolution_data_server ]; + environment.systemPackages = [ pkgs.gnome3.evolution-data-server ]; - services.dbus.packages = [ pkgs.gnome3.evolution_data_server ]; + services.dbus.packages = [ pkgs.gnome3.evolution-data-server ]; - systemd.packages = [ pkgs.gnome3.evolution_data_server ]; + systemd.packages = [ pkgs.gnome3.evolution-data-server ]; }; diff --git a/nixos/modules/services/desktops/gnome3/gnome-keyring.nix b/nixos/modules/services/desktops/gnome3/gnome-keyring.nix index 2a68af5a7dd8..aa1165ab3bba 100644 --- a/nixos/modules/services/desktops/gnome3/gnome-keyring.nix +++ b/nixos/modules/services/desktops/gnome3/gnome-keyring.nix @@ -31,9 +31,9 @@ with lib; config = mkIf config.services.gnome3.gnome-keyring.enable { - environment.systemPackages = [ pkgs.gnome3.gnome_keyring ]; + environment.systemPackages = [ pkgs.gnome3.gnome-keyring ]; - services.dbus.packages = [ pkgs.gnome3.gnome_keyring pkgs.gnome3.gcr ]; + services.dbus.packages = [ pkgs.gnome3.gnome-keyring pkgs.gnome3.gcr ]; }; diff --git a/nixos/modules/services/desktops/gnome3/gnome-online-accounts.nix b/nixos/modules/services/desktops/gnome3/gnome-online-accounts.nix index 0da4aca73ecb..4286251357f7 100644 --- a/nixos/modules/services/desktops/gnome3/gnome-online-accounts.nix +++ b/nixos/modules/services/desktops/gnome3/gnome-online-accounts.nix @@ -30,9 +30,9 @@ with lib; config = mkIf config.services.gnome3.gnome-online-accounts.enable { - environment.systemPackages = [ pkgs.gnome3.gnome_online_accounts ]; + environment.systemPackages = [ pkgs.gnome3.gnome-online-accounts ]; - services.dbus.packages = [ pkgs.gnome3.gnome_online_accounts ]; + services.dbus.packages = [ pkgs.gnome3.gnome-online-accounts ]; }; diff --git a/nixos/modules/services/desktops/gnome3/gnome-terminal-server.nix b/nixos/modules/services/desktops/gnome3/gnome-terminal-server.nix index 3ac767bfa00d..fd14efee5f2e 100644 --- a/nixos/modules/services/desktops/gnome3/gnome-terminal-server.nix +++ b/nixos/modules/services/desktops/gnome3/gnome-terminal-server.nix @@ -30,11 +30,11 @@ with lib; config = mkIf config.services.gnome3.gnome-terminal-server.enable { - environment.systemPackages = [ pkgs.gnome3.gnome_terminal ]; + environment.systemPackages = [ pkgs.gnome3.gnome-terminal ]; - services.dbus.packages = [ pkgs.gnome3.gnome_terminal ]; + services.dbus.packages = [ pkgs.gnome3.gnome-terminal ]; - systemd.packages = [ pkgs.gnome3.gnome_terminal ]; + systemd.packages = [ pkgs.gnome3.gnome-terminal ]; }; diff --git a/nixos/modules/services/desktops/telepathy.nix b/nixos/modules/services/desktops/telepathy.nix index 2554f3a1666f..f5401c180984 100644 --- a/nixos/modules/services/desktops/telepathy.nix +++ b/nixos/modules/services/desktops/telepathy.nix @@ -30,9 +30,9 @@ with lib; config = mkIf config.services.telepathy.enable { - environment.systemPackages = [ pkgs.telepathy_mission_control ]; + environment.systemPackages = [ pkgs.telepathy-mission-control ]; - services.dbus.packages = [ pkgs.telepathy_mission_control ]; + services.dbus.packages = [ pkgs.telepathy-mission-control ]; }; diff --git a/nixos/modules/services/hardware/acpid.nix b/nixos/modules/services/hardware/acpid.nix index f69706ebff34..0f05876aee32 100644 --- a/nixos/modules/services/hardware/acpid.nix +++ b/nixos/modules/services/hardware/acpid.nix @@ -53,6 +53,12 @@ in description = "Whether to enable the ACPI daemon."; }; + logEvents = mkOption { + type = types.bool; + default = false; + description = "Log all event activity."; + }; + handlers = mkOption { type = types.attrsOf (types.submodule { options = { @@ -142,7 +148,7 @@ in ConditionPathExists = [ "/proc/acpi" ]; }; - script = "acpid --confdir ${acpiConfDir}"; + script = "acpid ${optionalString config.services.acpid.logEvents "--logevents"} --confdir ${acpiConfDir}"; }; }; diff --git a/nixos/modules/services/hardware/fwupd.nix b/nixos/modules/services/hardware/fwupd.nix index 1f4acd21eccf..d8abde2a600a 100644 --- a/nixos/modules/services/hardware/fwupd.nix +++ b/nixos/modules/services/hardware/fwupd.nix @@ -8,12 +8,8 @@ let cfg = config.services.fwupd; originalEtc = let - isRegular = v: v == "regular"; - listFiles = d: builtins.attrNames (filterAttrs (const isRegular) (builtins.readDir d)); - copiedDirs = [ "fwupd/remotes.d" "pki/fwupd" "pki/fwupd-metadata" ]; - originalFiles = concatMap (d: map (f: "${d}/${f}") (listFiles "${pkgs.fwupd}/etc/${d}")) copiedDirs; mkEtcFile = n: nameValuePair n { source = "${pkgs.fwupd}/etc/${n}"; }; - in listToAttrs (map mkEtcFile originalFiles); + in listToAttrs (map mkEtcFile pkgs.fwupd.filesInstalledToEtc); extraTrustedKeys = let mkName = p: "pki/fwupd/${baseNameOf (toString p)}"; diff --git a/nixos/modules/services/misc/disnix.nix b/nixos/modules/services/misc/disnix.nix index e96645c79c77..39d23610b064 100644 --- a/nixos/modules/services/misc/disnix.nix +++ b/nixos/modules/services/misc/disnix.nix @@ -32,11 +32,17 @@ in description = "Whether to enable Disnix"; }; + enableMultiUser = mkOption { + type = types.bool; + default = true; + description = "Whether to support multi-user mode by enabling the Disnix D-Bus service"; + }; + useWebServiceInterface = mkOption { default = false; description = "Whether to enable the DisnixWebService interface running on Apache Tomcat"; }; - + package = mkOption { type = types.path; description = "The Disnix package"; @@ -52,7 +58,7 @@ in config = mkIf cfg.enable { dysnomia.enable = true; - + environment.systemPackages = [ pkgs.disnix ] ++ optional cfg.useWebServiceInterface pkgs.DisnixWebService; services.dbus.enable = true; @@ -71,7 +77,7 @@ in }; systemd.services = { - disnix = { + disnix = mkIf cfg.enableMultiUser { description = "Disnix server"; wants = [ "dysnomia.target" ]; wantedBy = [ "multi-user.target" ]; @@ -92,7 +98,7 @@ in } // (if config.environment.variables ? DYSNOMIA_CONTAINERS_PATH then { inherit (config.environment.variables) DYSNOMIA_CONTAINERS_PATH; } else {}) // (if config.environment.variables ? DYSNOMIA_MODULES_PATH then { inherit (config.environment.variables) DYSNOMIA_MODULES_PATH; } else {}); - + serviceConfig.ExecStart = "${cfg.package}/bin/disnix-service"; }; diff --git a/nixos/modules/services/misc/nix-ssh-serve.nix b/nixos/modules/services/misc/nix-ssh-serve.nix index 66148431709f..5bd9cf9086f1 100644 --- a/nixos/modules/services/misc/nix-ssh-serve.nix +++ b/nixos/modules/services/misc/nix-ssh-serve.nix @@ -1,8 +1,12 @@ { config, lib, pkgs, ... }: with lib; - -{ +let cfg = config.nix.sshServe; + command = + if cfg.protocol == "ssh" + then "nix-store --serve" + else "nix-daemon --stdio"; +in { options = { nix.sshServe = { @@ -10,7 +14,7 @@ with lib; enable = mkOption { type = types.bool; default = false; - description = "Whether to enable serving the Nix store as a binary cache via SSH."; + description = "Whether to enable serving the Nix store as a remote store via SSH."; }; keys = mkOption { @@ -20,14 +24,20 @@ with lib; description = "A list of SSH public keys allowed to access the binary cache via SSH."; }; + protocol = mkOption { + type = types.enum [ "ssh" "ssh-ng" ]; + default = "ssh"; + description = "The specific Nix-over-SSH protocol to use."; + }; + }; }; - config = mkIf config.nix.sshServe.enable { + config = mkIf cfg.enable { users.extraUsers.nix-ssh = { - description = "Nix SSH substituter user"; + description = "Nix SSH store user"; uid = config.ids.uids.nix-ssh; useDefaultShell = true; }; @@ -41,11 +51,11 @@ with lib; PermitTTY no PermitTunnel no X11Forwarding no - ForceCommand ${config.nix.package.out}/bin/nix-store --serve + ForceCommand ${config.nix.package.out}/bin/${command} Match All ''; - users.extraUsers.nix-ssh.openssh.authorizedKeys.keys = config.nix.sshServe.keys; + users.extraUsers.nix-ssh.openssh.authorizedKeys.keys = cfg.keys; }; } diff --git a/nixos/modules/services/networking/networkmanager.nix b/nixos/modules/services/networking/networkmanager.nix index 62afbf32c2f6..e9a035d17d38 100644 --- a/nixos/modules/services/networking/networkmanager.nix +++ b/nixos/modules/services/networking/networkmanager.nix @@ -133,10 +133,10 @@ in { basePackages = mkOption { type = types.attrsOf types.package; default = { inherit networkmanager modemmanager wpa_supplicant - networkmanager_openvpn networkmanager_vpnc - networkmanager_openconnect networkmanager_fortisslvpn - networkmanager_pptp networkmanager_l2tp - networkmanager_iodine; }; + networkmanager-openvpn networkmanager-vpnc + networkmanager-openconnect networkmanager-fortisslvpn + networkmanager-pptp networkmanager-l2tp + networkmanager-iodine; }; internal = true; }; @@ -273,28 +273,28 @@ in { { source = configFile; target = "NetworkManager/NetworkManager.conf"; } - { source = "${networkmanager_openvpn}/etc/NetworkManager/VPN/nm-openvpn-service.name"; + { source = "${networkmanager-openvpn}/etc/NetworkManager/VPN/nm-openvpn-service.name"; target = "NetworkManager/VPN/nm-openvpn-service.name"; } - { source = "${networkmanager_vpnc}/etc/NetworkManager/VPN/nm-vpnc-service.name"; + { source = "${networkmanager-vpnc}/etc/NetworkManager/VPN/nm-vpnc-service.name"; target = "NetworkManager/VPN/nm-vpnc-service.name"; } - { source = "${networkmanager_openconnect}/etc/NetworkManager/VPN/nm-openconnect-service.name"; + { source = "${networkmanager-openconnect}/etc/NetworkManager/VPN/nm-openconnect-service.name"; target = "NetworkManager/VPN/nm-openconnect-service.name"; } - { source = "${networkmanager_fortisslvpn}/etc/NetworkManager/VPN/nm-fortisslvpn-service.name"; + { source = "${networkmanager-fortisslvpn}/etc/NetworkManager/VPN/nm-fortisslvpn-service.name"; target = "NetworkManager/VPN/nm-fortisslvpn-service.name"; } - { source = "${networkmanager_pptp}/etc/NetworkManager/VPN/nm-pptp-service.name"; + { source = "${networkmanager-pptp}/etc/NetworkManager/VPN/nm-pptp-service.name"; target = "NetworkManager/VPN/nm-pptp-service.name"; } - { source = "${networkmanager_l2tp}/etc/NetworkManager/VPN/nm-l2tp-service.name"; + { source = "${networkmanager-l2tp}/etc/NetworkManager/VPN/nm-l2tp-service.name"; target = "NetworkManager/VPN/nm-l2tp-service.name"; } { source = "${networkmanager_strongswan}/etc/NetworkManager/VPN/nm-strongswan-service.name"; target = "NetworkManager/VPN/nm-strongswan-service.name"; } - { source = "${networkmanager_iodine}/etc/NetworkManager/VPN/nm-iodine-service.name"; + { source = "${networkmanager-iodine}/etc/NetworkManager/VPN/nm-iodine-service.name"; target = "NetworkManager/VPN/nm-iodine-service.name"; } ] ++ optional (cfg.appendNameservers == [] || cfg.insertNameservers == []) diff --git a/nixos/modules/services/networking/softether.nix b/nixos/modules/services/networking/softether.nix index 9087b75c29c1..65df93a00da9 100644 --- a/nixos/modules/services/networking/softether.nix +++ b/nixos/modules/services/networking/softether.nix @@ -5,6 +5,8 @@ with lib; let cfg = config.services.softether; + package = cfg.package.override { dataDir = cfg.dataDir; }; + in { @@ -49,7 +51,7 @@ in dataDir = mkOption { type = types.string; - default = "${cfg.package.dataDir}"; + default = "/var/lib/softether"; description = '' Data directory for SoftEther VPN. ''; @@ -64,11 +66,8 @@ in config = mkIf cfg.enable ( mkMerge [{ - environment.systemPackages = [ - (pkgs.lib.overrideDerivation cfg.package (attrs: { - dataDir = cfg.dataDir; - })) - ]; + environment.systemPackages = [ package ]; + systemd.services."softether-init" = { description = "SoftEther VPN services initial task"; wantedBy = [ "network.target" ]; @@ -80,11 +79,11 @@ in for d in vpnserver vpnbridge vpnclient vpncmd; do if ! test -e ${cfg.dataDir}/$d; then ${pkgs.coreutils}/bin/mkdir -m0700 -p ${cfg.dataDir}/$d - install -m0600 ${cfg.package}${cfg.dataDir}/$d/hamcore.se2 ${cfg.dataDir}/$d/hamcore.se2 + install -m0600 ${package}${cfg.dataDir}/$d/hamcore.se2 ${cfg.dataDir}/$d/hamcore.se2 fi done rm -rf ${cfg.dataDir}/vpncmd/vpncmd - ln -s ${cfg.package}${cfg.dataDir}/vpncmd/vpncmd ${cfg.dataDir}/vpncmd/vpncmd + ln -s ${package}${cfg.dataDir}/vpncmd/vpncmd ${cfg.dataDir}/vpncmd/vpncmd ''; }; } @@ -97,12 +96,12 @@ in wantedBy = [ "network.target" ]; serviceConfig = { Type = "forking"; - ExecStart = "${cfg.package}/bin/vpnserver start"; - ExecStop = "${cfg.package}/bin/vpnserver stop"; + ExecStart = "${package}/bin/vpnserver start"; + ExecStop = "${package}/bin/vpnserver stop"; }; preStart = '' rm -rf ${cfg.dataDir}/vpnserver/vpnserver - ln -s ${cfg.package}${cfg.dataDir}/vpnserver/vpnserver ${cfg.dataDir}/vpnserver/vpnserver + ln -s ${package}${cfg.dataDir}/vpnserver/vpnserver ${cfg.dataDir}/vpnserver/vpnserver ''; postStop = '' rm -rf ${cfg.dataDir}/vpnserver/vpnserver @@ -118,12 +117,12 @@ in wantedBy = [ "network.target" ]; serviceConfig = { Type = "forking"; - ExecStart = "${cfg.package}/bin/vpnbridge start"; - ExecStop = "${cfg.package}/bin/vpnbridge stop"; + ExecStart = "${package}/bin/vpnbridge start"; + ExecStop = "${package}/bin/vpnbridge stop"; }; preStart = '' rm -rf ${cfg.dataDir}/vpnbridge/vpnbridge - ln -s ${cfg.package}${cfg.dataDir}/vpnbridge/vpnbridge ${cfg.dataDir}/vpnbridge/vpnbridge + ln -s ${package}${cfg.dataDir}/vpnbridge/vpnbridge ${cfg.dataDir}/vpnbridge/vpnbridge ''; postStop = '' rm -rf ${cfg.dataDir}/vpnbridge/vpnbridge @@ -139,12 +138,12 @@ in wantedBy = [ "network.target" ]; serviceConfig = { Type = "forking"; - ExecStart = "${cfg.package}/bin/vpnclient start"; - ExecStop = "${cfg.package}/bin/vpnclient stop"; + ExecStart = "${package}/bin/vpnclient start"; + ExecStop = "${package}/bin/vpnclient stop"; }; preStart = '' rm -rf ${cfg.dataDir}/vpnclient/vpnclient - ln -s ${cfg.package}${cfg.dataDir}/vpnclient/vpnclient ${cfg.dataDir}/vpnclient/vpnclient + ln -s ${package}${cfg.dataDir}/vpnclient/vpnclient ${cfg.dataDir}/vpnclient/vpnclient ''; postStart = '' sleep 1 diff --git a/nixos/modules/services/networking/syncthing.nix b/nixos/modules/services/networking/syncthing.nix index dcdc203bdc62..e485c073cbdd 100644 --- a/nixos/modules/services/networking/syncthing.nix +++ b/nixos/modules/services/networking/syncthing.nix @@ -16,12 +16,6 @@ in { available on http://127.0.0.1:8384/. ''; - useInotify = mkOption { - type = types.bool; - default = false; - description = "Provide syncthing-inotify as a service."; - }; - systemService = mkOption { type = types.bool; default = true; @@ -90,6 +84,12 @@ in { }; }; + imports = [ + (mkRemovedOptionModule ["services" "syncthing" "useInotify"] '' + This option was removed because syncthing now has the inotify functionality included under the name "fswatcher". + It can be enabled on a per-folder basis through the webinterface. + '') + ]; ###### implementation @@ -100,8 +100,7 @@ in { allowedUDPPorts = [ 21027 ]; }; - systemd.packages = [ pkgs.syncthing ] - ++ lib.optional cfg.useInotify pkgs.syncthing-inotify; + systemd.packages = [ pkgs.syncthing ]; users = mkIf (cfg.user == defaultUser) { extraUsers."${defaultUser}" = @@ -125,7 +124,6 @@ in { STNOUPGRADE = "yes"; inherit (cfg) all_proxy; } // config.networking.proxy.envVars; - wants = mkIf cfg.useInotify [ "syncthing-inotify.service" ]; wantedBy = [ "multi-user.target" ]; serviceConfig = { Restart = "on-failure"; @@ -141,20 +139,6 @@ in { syncthing-resume = { wantedBy = [ "suspend.target" ]; }; - - syncthing-inotify = mkIf (cfg.systemService && cfg.useInotify) { - description = "Syncthing Inotify File Watcher service"; - after = [ "network.target" "syncthing.service" ]; - requires = [ "syncthing.service" ]; - wantedBy = [ "multi-user.target" ]; - serviceConfig = { - SuccessExitStatus = "2"; - RestartForceExitStatus = "3"; - Restart = "on-failure"; - User = cfg.user; - ExecStart = "${pkgs.syncthing-inotify.bin}/bin/syncthing-inotify -home=${cfg.dataDir} -logflags=0"; - }; - }; }; }; } diff --git a/nixos/modules/services/networking/tinc.nix b/nixos/modules/services/networking/tinc.nix index adb80ea29840..e3c9b5282b8c 100644 --- a/nixos/modules/services/networking/tinc.nix +++ b/nixos/modules/services/networking/tinc.nix @@ -178,6 +178,8 @@ in preStart = '' mkdir -p /etc/tinc/${network}/hosts chown tinc.${network} /etc/tinc/${network}/hosts + mkdir -p /etc/tinc/${network}/invitations + chown tinc.${network} /etc/tinc/${network}/invitations # Determine how we should generate our keys if type tinc >/dev/null 2>&1; then diff --git a/nixos/modules/services/networking/tox-bootstrapd.nix b/nixos/modules/services/networking/tox-bootstrapd.nix index c1f945773e23..cb0e6b158651 100644 --- a/nixos/modules/services/networking/tox-bootstrapd.nix +++ b/nixos/modules/services/networking/tox-bootstrapd.nix @@ -69,7 +69,7 @@ in after = [ "network.target" ]; wantedBy = [ "multi-user.target" ]; serviceConfig = - { ExecStart = "${pkg}/bin/tox-bootstrapd ${cfgFile}"; + { ExecStart = "${pkg}/bin/tox-bootstrapd --config=${cfgFile}"; Type = "forking"; inherit PIDFile; User = "tox-bootstrapd"; diff --git a/nixos/modules/services/security/usbguard.nix b/nixos/modules/services/security/usbguard.nix index 4e685e633354..5d469cabe2cb 100644 --- a/nixos/modules/services/security/usbguard.nix +++ b/nixos/modules/services/security/usbguard.nix @@ -192,7 +192,7 @@ in { serviceConfig = { Type = "simple"; - ExecStart = ''${pkgs.usbguard}/bin/usbguard-daemon -d -k -c ${daemonConfFile}''; + ExecStart = ''${pkgs.usbguard}/bin/usbguard-daemon -P -d -k -c ${daemonConfFile}''; Restart = "on-failure"; }; }; diff --git a/nixos/modules/services/web-apps/piwik-doc.xml b/nixos/modules/services/web-apps/matomo-doc.xml similarity index 58% rename from nixos/modules/services/web-apps/piwik-doc.xml rename to nixos/modules/services/web-apps/matomo-doc.xml index a393a182d36a..456aae6cc366 100644 --- a/nixos/modules/services/web-apps/piwik-doc.xml +++ b/nixos/modules/services/web-apps/matomo-doc.xml @@ -2,16 +2,16 @@ xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xi="http://www.w3.org/2001/XInclude" version="5.0" - xml:id="module-services-piwik"> + xml:id="module-services-matomo"> - Piwik + Matomo - Piwik is a real-time web analytics application. - This module configures php-fpm as backend for piwik, optionally configuring an nginx vhost as well. + Matomo is a real-time web analytics application. + This module configures php-fpm as backend for Matomo, optionally configuring an nginx vhost as well. - An automatic setup is not suported by piwik, so you need to configure piwik itself in the browser-based piwik setup. + An automatic setup is not suported by Matomo, so you need to configure Matomo itself in the browser-based Matomo setup. @@ -19,7 +19,7 @@ Database Setup - You also need to configure a MariaDB or MySQL database and -user for piwik yourself, + You also need to configure a MariaDB or MySQL database and -user for Matomo yourself, and enter those credentials in your browser. You can use passwordless database authentication via the UNIX_SOCKET authentication plugin with the following SQL commands: @@ -27,20 +27,20 @@ # For MariaDB INSTALL PLUGIN unix_socket SONAME 'auth_socket'; - CREATE DATABASE piwik; - CREATE USER 'piwik'@'localhost' IDENTIFIED WITH unix_socket; - GRANT ALL PRIVILEGES ON piwik.* TO 'piwik'@'localhost'; + CREATE DATABASE matomo; + CREATE USER 'matomo'@'localhost' IDENTIFIED WITH unix_socket; + GRANT ALL PRIVILEGES ON matomo.* TO 'matomo'@'localhost'; # For MySQL INSTALL PLUGIN auth_socket SONAME 'auth_socket.so'; - CREATE DATABASE piwik; - CREATE USER 'piwik'@'localhost' IDENTIFIED WITH auth_socket; - GRANT ALL PRIVILEGES ON piwik.* TO 'piwik'@'localhost'; + CREATE DATABASE matomo; + CREATE USER 'matomo'@'localhost' IDENTIFIED WITH auth_socket; + GRANT ALL PRIVILEGES ON matomo.* TO 'matomo'@'localhost'; - Then fill in piwik as database user and database name, and leave the password field blank. - This authentication works by allowing only the piwik unix user to authenticate as the - piwik database user (without needing a password), but no other users. + Then fill in matomo as database user and database name, and leave the password field blank. + This authentication works by allowing only the matomo unix user to authenticate as the + matomo database user (without needing a password), but no other users. For more information on passwordless login, see . @@ -55,9 +55,9 @@ Backup You only need to take backups of your MySQL database and the - /var/lib/piwik/config/config.ini.php file. - Use a user in the piwik group or root to access the file. - For more information, see . + /var/lib/matomo/config/config.ini.php file. + Use a user in the matomo group or root to access the file. + For more information, see . @@ -67,14 +67,14 @@ - Piwik's file integrity check will warn you. + Matomo's file integrity check will warn you. This is due to the patches necessary for NixOS, you can safely ignore this. - Piwik will warn you that the JavaScript tracker is not writable. + Matomo will warn you that the JavaScript tracker is not writable. This is because it's located in the read-only nix store. You can safely ignore this, unless you need a plugin that needs JavaScript tracker access. @@ -88,7 +88,7 @@ You can use other web servers by forwarding calls for index.php and - piwik.php to the /run/phpfpm-piwik.sock fastcgi unix socket. + piwik.php to the /run/phpfpm-matomo.sock fastcgi unix socket. You can use the nginx configuration in the module code as a reference to what else should be configured. diff --git a/nixos/modules/services/web-apps/piwik.nix b/nixos/modules/services/web-apps/matomo.nix similarity index 73% rename from nixos/modules/services/web-apps/piwik.nix rename to nixos/modules/services/web-apps/matomo.nix index ce86c6873dd4..ef6ac9698e21 100644 --- a/nixos/modules/services/web-apps/piwik.nix +++ b/nixos/modules/services/web-apps/matomo.nix @@ -1,10 +1,11 @@ { config, lib, pkgs, services, ... }: with lib; let - cfg = config.services.piwik; + cfg = config.services.matomo; - user = "piwik"; + user = "matomo"; dataDir = "/var/lib/${user}"; + deprecatedDataDir = "/var/lib/piwik"; pool = user; # it's not possible to use /run/phpfpm/${pool}.sock because /run/phpfpm/ is root:root 0770, @@ -13,17 +14,22 @@ let phpExecutionUnit = "phpfpm-${pool}"; databaseService = "mysql.service"; + fqdn = + let + join = hostName: domain: hostName + optionalString (domain != null) ".${domain}"; + in join config.networking.hostName config.networking.domain; + in { options = { - services.piwik = { + services.matomo = { # NixOS PR for database setup: https://github.com/NixOS/nixpkgs/pull/6963 - # piwik issue for automatic piwik setup: https://github.com/piwik/piwik/issues/10257 - # TODO: find a nice way to do this when more NixOS MySQL and / or piwik automatic setup stuff is implemented. + # matomo issue for automatic matomo setup: https://github.com/matomo-org/matomo/issues/10257 + # TODO: find a nice way to do this when more NixOS MySQL and / or matomo automatic setup stuff is implemented. enable = mkOption { type = types.bool; default = false; description = '' - Enable piwik web analytics with php-fpm backend. + Enable matomo web analytics with php-fpm backend. Either the nginx option or the webServerUser option is mandatory. ''; }; @@ -32,8 +38,9 @@ in { type = types.nullOr types.str; default = null; example = "lighttpd"; + # TODO: piwik.php might get renamed to matomo.php in future releases description = '' - Name of the web server user that forwards requests to the ${phpSocket} fastcgi socket for piwik if the nginx + Name of the web server user that forwards requests to the ${phpSocket} fastcgi socket for matomo if the nginx option is not used. Either this option or the nginx option is mandatory. If you want to use another webserver than nginx, you need to set this to that server's user and pass fastcgi requests to `index.php` and `piwik.php` to this socket. @@ -55,7 +62,7 @@ in { catch_workers_output = yes ''; description = '' - Settings for phpfpm's process manager. You might need to change this depending on the load for piwik. + Settings for phpfpm's process manager. You might need to change this depending on the load for matomo. ''; }; @@ -65,7 +72,7 @@ in { (import ../web-servers/nginx/vhost-options.nix { inherit config lib; }) { # enable encryption by default, - # as sensitive login and piwik data should not be transmitted in clear text. + # as sensitive login and matomo data should not be transmitted in clear text. options.forceSSL.default = true; options.enableACME.default = true; } @@ -73,15 +80,19 @@ in { ); default = null; example = { - serverName = "stats.$\{config.networking.hostName\}"; + serverAliases = [ + "matomo.$\{config.networking.domain\}" + "stats.$\{config.networking.domain\}" + ]; enableACME = false; }; description = '' - With this option, you can customize an nginx virtualHost which already has sensible defaults for piwik. + With this option, you can customize an nginx virtualHost which already has sensible defaults for matomo. Either this option or the webServerUser option is mandatory. Set this to {} to just enable the virtualHost if you don't need any customization. - If enabled, then by default, the serverName is piwik.$\{config.networking.hostName\}, SSL is active, - and certificates are acquired via ACME. + If enabled, then by default, the is + ${user}.$\{config.networking.hostName\}.$\{config.networking.domain\}, + SSL is active, and certificates are acquired via ACME. If this is set to null (the default), no nginx virtualHost will be configured. ''; }; @@ -90,12 +101,12 @@ in { config = mkIf cfg.enable { warnings = mkIf (cfg.nginx != null && cfg.webServerUser != null) [ - "If services.piwik.nginx is set, services.piwik.nginx.webServerUser is ignored and should be removed." + "If services.matomo.nginx is set, services.matomo.nginx.webServerUser is ignored and should be removed." ]; assertions = [ { assertion = cfg.nginx != null || cfg.webServerUser != null; - message = "Either services.piwik.nginx or services.piwik.nginx.webServerUser is mandatory"; + message = "Either services.matomo.nginx or services.matomo.nginx.webServerUser is mandatory"; }]; users.extraUsers.${user} = { @@ -106,19 +117,20 @@ in { }; users.extraGroups.${user} = {}; - systemd.services.piwik_setup_update = { - # everything needs to set up and up to date before piwik php files are executed + systemd.services.matomo_setup_update = { + # everything needs to set up and up to date before matomo php files are executed requiredBy = [ "${phpExecutionUnit}.service" ]; before = [ "${phpExecutionUnit}.service" ]; # the update part of the script can only work if the database is already up and running requires = [ databaseService ]; after = [ databaseService ]; - path = [ pkgs.piwik ]; + path = [ pkgs.matomo ]; serviceConfig = { Type = "oneshot"; User = user; # hide especially config.ini.php from other UMask = "0007"; + # TODO: might get renamed to MATOMO_USER_PATH in future versions Environment = "PIWIK_USER_PATH=${dataDir}"; # chown + chmod in preStart needs root PermissionsStartOnly = true; @@ -127,27 +139,32 @@ in { # e.g. after restoring from backup or moving from another system. # Note that ${dataDir}/config/config.ini.php might contain the MySQL password. preStart = '' + # migrate data from piwik to matomo folder + if [ -d ${deprecatedDataDir} ]; then + echo "Migrating from ${deprecatedDataDir} to ${dataDir}" + mv -T ${deprecatedDataDir} ${dataDir} + fi chown -R ${user}:${user} ${dataDir} chmod -R ug+rwX,o-rwx ${dataDir} ''; script = '' - # Use User-Private Group scheme to protect piwik data, but allow administration / backup via piwik group + # Use User-Private Group scheme to protect matomo data, but allow administration / backup via matomo group # Copy config folder chmod g+s "${dataDir}" - cp -r "${pkgs.piwik}/config" "${dataDir}/" + cp -r "${pkgs.matomo}/config" "${dataDir}/" chmod -R u+rwX,g+rwX,o-rwx "${dataDir}" # check whether user setup has already been done if test -f "${dataDir}/config/config.ini.php"; then # then execute possibly pending database upgrade - piwik-console core:update --yes + matomo-console core:update --yes fi ''; }; systemd.services.${phpExecutionUnit} = { - # stop phpfpm on package upgrade, do database upgrade via piwik_setup_update, and then restart - restartTriggers = [ pkgs.piwik ]; + # stop phpfpm on package upgrade, do database upgrade via matomo_setup_update, and then restart + restartTriggers = [ pkgs.matomo ]; # stop config.ini.php from getting written with read permission for others serviceConfig.UMask = "0007"; }; @@ -175,14 +192,14 @@ in { # References: # https://fralef.me/piwik-hardening-with-nginx-and-php-fpm.html # https://github.com/perusio/piwik-nginx - "${user}.${config.networking.hostName}" = mkMerge [ cfg.nginx { - # don't allow to override the root easily, as it will almost certainly break piwik. + "${user}.${fqdn}" = mkMerge [ cfg.nginx { + # don't allow to override the root easily, as it will almost certainly break matomo. # disadvantage: not shown as default in docs. - root = mkForce "${pkgs.piwik}/share"; + root = mkForce "${pkgs.matomo}/share"; # define locations here instead of as the submodule option's default # so that they can easily be extended with additional locations if required - # without needing to redefine the piwik ones. + # without needing to redefine the matomo ones. # disadvantage: not shown as default in docs. locations."/" = { index = "index.php"; @@ -191,6 +208,7 @@ in { locations."= /index.php".extraConfig = '' fastcgi_pass unix:${phpSocket}; ''; + # TODO: might get renamed to matomo.php in future versions # allow piwik.php for tracking locations."= /piwik.php".extraConfig = '' fastcgi_pass unix:${phpSocket}; @@ -212,6 +230,7 @@ in { locations."= /robots.txt".extraConfig = '' return 200 "User-agent: *\nDisallow: /\n"; ''; + # TODO: might get renamed to matomo.js in future versions # let browsers cache piwik.js locations."= /piwik.js".extraConfig = '' expires 1M; @@ -221,7 +240,7 @@ in { }; meta = { - doc = ./piwik-doc.xml; + doc = ./matomo-doc.xml; maintainers = with stdenv.lib.maintainers; [ florianjacob ]; }; } diff --git a/nixos/modules/services/x11/desktop-managers/enlightenment.nix b/nixos/modules/services/x11/desktop-managers/enlightenment.nix index 7f3dc0d7847b..da3287aaea6e 100644 --- a/nixos/modules/services/x11/desktop-managers/enlightenment.nix +++ b/nixos/modules/services/x11/desktop-managers/enlightenment.nix @@ -33,7 +33,7 @@ in pkgs.xorg.xauth # used by kdesu pkgs.gtk2 # To get GTK+'s themes. pkgs.tango-icon-theme - pkgs.shared_mime_info + pkgs.shared-mime-info pkgs.gnome2.gnomeicontheme pkgs.xorg.xcursorthemes ]; diff --git a/nixos/modules/services/x11/desktop-managers/gnome3.nix b/nixos/modules/services/x11/desktop-managers/gnome3.nix index 21d30df5b695..3d68f2b1c9b3 100644 --- a/nixos/modules/services/x11/desktop-managers/gnome3.nix +++ b/nixos/modules/services/x11/desktop-managers/gnome3.nix @@ -27,7 +27,7 @@ let nixos-gsettings-desktop-schemas = pkgs.runCommand "nixos-gsettings-desktop-schemas" {} '' mkdir -p $out/share/gsettings-schemas/nixos-gsettings-overrides/glib-2.0/schemas - cp -rf ${pkgs.gnome3.gsettings_desktop_schemas}/share/gsettings-schemas/gsettings-desktop-schemas*/glib-2.0/schemas/*.xml $out/share/gsettings-schemas/nixos-gsettings-overrides/glib-2.0/schemas + cp -rf ${pkgs.gnome3.gsettings-desktop-schemas}/share/gsettings-schemas/gsettings-desktop-schemas*/glib-2.0/schemas/*.xml $out/share/gsettings-schemas/nixos-gsettings-overrides/glib-2.0/schemas ${concatMapStrings (pkg: "cp -rf ${pkg}/share/gsettings-schemas/*/glib-2.0/schemas/*.xml $out/share/gsettings-schemas/nixos-gsettings-overrides/glib-2.0/schemas\n") cfg.extraGSettingsOverridePackages} @@ -60,7 +60,7 @@ in { example = literalExample "[ pkgs.gnome3.gpaste ]"; description = "Additional list of packages to be added to the session search path. Useful for gnome shell extensions or gsettings-conditionated autostart."; - apply = list: list ++ [ pkgs.gnome3.gnome_shell pkgs.gnome3.gnome-shell-extensions ]; + apply = list: list ++ [ pkgs.gnome3.gnome-shell pkgs.gnome3.gnome-shell-extensions ]; }; extraGSettingsOverrides = mkOption { @@ -118,7 +118,7 @@ in { services.packagekit.enable = mkDefault true; hardware.bluetooth.enable = mkDefault true; services.xserver.libinput.enable = mkDefault true; # for controlling touchpad settings via gnome control center - services.udev.packages = [ pkgs.gnome3.gnome_settings_daemon ]; + services.udev.packages = [ pkgs.gnome3.gnome-settings-daemon ]; systemd.packages = [ pkgs.gnome3.vino ]; # If gnome3 is installed, build vim for gtk3 too. @@ -164,7 +164,7 @@ in { # Update user dirs as described in http://freedesktop.org/wiki/Software/xdg-user-dirs/ ${pkgs.xdg-user-dirs}/bin/xdg-user-dirs-update - ${pkgs.gnome3.gnome_session}/bin/gnome-session ${optionalString cfg.debug "--debug"} & + ${pkgs.gnome3.gnome-session}/bin/gnome-session ${optionalString cfg.debug "--debug"} & waitPID=$! ''; }; @@ -172,7 +172,7 @@ in { services.xserver.updateDbusEnvironment = true; environment.variables.GIO_EXTRA_MODULES = [ "${lib.getLib pkgs.gnome3.dconf}/lib/gio/modules" - "${pkgs.gnome3.glib_networking.out}/lib/gio/modules" + "${pkgs.gnome3.glib-networking.out}/lib/gio/modules" "${pkgs.gnome3.gvfs}/lib/gio/modules" ]; environment.systemPackages = pkgs.gnome3.corePackages ++ cfg.sessionPath ++ (removePackagesByName pkgs.gnome3.optionalPackages config.environment.gnome3.excludePackages); @@ -180,10 +180,10 @@ in { # Use the correct gnome3 packageSet networking.networkmanager.basePackages = { inherit (pkgs) networkmanager modemmanager wpa_supplicant; - inherit (pkgs.gnome3) networkmanager_openvpn networkmanager_vpnc - networkmanager_openconnect networkmanager_fortisslvpn - networkmanager_pptp networkmanager_iodine - networkmanager_l2tp; }; + inherit (pkgs.gnome3) networkmanager-openvpn networkmanager-vpnc + networkmanager-openconnect networkmanager-fortisslvpn + networkmanager-pptp networkmanager-iodine + networkmanager-l2tp; }; # Needed for themes and backgrounds environment.pathsToLink = [ "/share" ]; diff --git a/nixos/modules/services/x11/desktop-managers/mate.nix b/nixos/modules/services/x11/desktop-managers/mate.nix index 814503ab0bc4..0117dc9d132b 100644 --- a/nixos/modules/services/x11/desktop-managers/mate.nix +++ b/nixos/modules/services/x11/desktop-managers/mate.nix @@ -102,7 +102,7 @@ in services.dbus.packages = [ pkgs.gnome3.dconf - pkgs.at_spi2_core + pkgs.at-spi2-core ]; services.gnome3.gnome-keyring.enable = true; diff --git a/nixos/modules/services/x11/desktop-managers/plasma5.nix b/nixos/modules/services/x11/desktop-managers/plasma5.nix index b794e2b12d73..91d091d7d7e2 100644 --- a/nixos/modules/services/x11/desktop-managers/plasma5.nix +++ b/nixos/modules/services/x11/desktop-managers/plasma5.nix @@ -154,7 +154,7 @@ in print-manager breeze-icons - pkgs.hicolor_icon_theme + pkgs.hicolor-icon-theme kde-gtk-config breeze-gtk diff --git a/nixos/modules/services/x11/desktop-managers/xfce.nix b/nixos/modules/services/x11/desktop-managers/xfce.nix index c0c9d7ea47f7..489bffbee917 100644 --- a/nixos/modules/services/x11/desktop-managers/xfce.nix +++ b/nixos/modules/services/x11/desktop-managers/xfce.nix @@ -61,12 +61,12 @@ in # utilities-terminal, accessories-text-editor gnome3.defaultIconTheme - hicolor_icon_theme + hicolor-icon-theme tango-icon-theme xfce4-icon-theme - desktop_file_utils - shared_mime_info + desktop-file-utils + shared-mime-info # Needed by Xfce's xinitrc script # TODO: replace with command -v diff --git a/nixos/modules/services/x11/display-managers/gdm.nix b/nixos/modules/services/x11/display-managers/gdm.nix index 07642a8b13db..70fc7388c2ac 100644 --- a/nixos/modules/services/x11/display-managers/gdm.nix +++ b/nixos/modules/services/x11/display-managers/gdm.nix @@ -133,7 +133,7 @@ in StandardError = "inherit"; }; - systemd.services.display-manager.path = [ pkgs.gnome3.gnome_session ]; + systemd.services.display-manager.path = [ pkgs.gnome3.gnome-session ]; services.dbus.packages = [ gdm ]; @@ -193,7 +193,7 @@ in auth required pam_env.so envfile=${config.system.build.pamEnvironment} auth required pam_succeed_if.so uid >= 1000 quiet - auth optional ${pkgs.gnome3.gnome_keyring}/lib/security/pam_gnome_keyring.so + auth optional ${pkgs.gnome3.gnome-keyring}/lib/security/pam_gnome_keyring.so auth ${if config.security.pam.enableEcryptfs then "required" else "sufficient"} pam_unix.so nullok likeauth ${optionalString config.security.pam.enableEcryptfs "auth required ${pkgs.ecryptfs}/lib/security/pam_ecryptfs.so unwrap"} @@ -213,7 +213,7 @@ in "session optional ${pkgs.ecryptfs}/lib/security/pam_ecryptfs.so"} session required pam_loginuid.so session optional ${pkgs.systemd}/lib/security/pam_systemd.so - session optional ${pkgs.gnome3.gnome_keyring}/lib/security/pam_gnome_keyring.so auto_start + session optional ${pkgs.gnome3.gnome-keyring}/lib/security/pam_gnome_keyring.so auto_start ''; gdm-password.text = '' @@ -221,7 +221,7 @@ in auth required pam_env.so envfile=${config.system.build.pamEnvironment} auth required pam_succeed_if.so uid >= 1000 quiet - auth optional ${pkgs.gnome3.gnome_keyring}/lib/security/pam_gnome_keyring.so + auth optional ${pkgs.gnome3.gnome-keyring}/lib/security/pam_gnome_keyring.so auth ${if config.security.pam.enableEcryptfs then "required" else "sufficient"} pam_unix.so nullok likeauth ${optionalString config.security.pam.enableEcryptfs "auth required ${pkgs.ecryptfs}/lib/security/pam_ecryptfs.so unwrap"} @@ -240,7 +240,7 @@ in "session optional ${pkgs.ecryptfs}/lib/security/pam_ecryptfs.so"} session required pam_loginuid.so session optional ${pkgs.systemd}/lib/security/pam_systemd.so - session optional ${pkgs.gnome3.gnome_keyring}/lib/security/pam_gnome_keyring.so auto_start + session optional ${pkgs.gnome3.gnome-keyring}/lib/security/pam_gnome_keyring.so auto_start ''; gdm-autologin.text = '' diff --git a/nixos/modules/services/x11/display-managers/lightdm-greeters/gtk.nix b/nixos/modules/services/x11/display-managers/lightdm-greeters/gtk.nix index 35b715b98fcd..2a71d2338607 100644 --- a/nixos/modules/services/x11/display-managers/lightdm-greeters/gtk.nix +++ b/nixos/modules/services/x11/display-managers/lightdm-greeters/gtk.nix @@ -68,8 +68,8 @@ in package = mkOption { type = types.package; - default = pkgs.gnome3.gnome_themes_standard; - defaultText = "pkgs.gnome3.gnome_themes_standard"; + default = pkgs.gnome3.gnome-themes-standard; + defaultText = "pkgs.gnome3.gnome-themes-standard"; description = '' The package path that contains the theme given in the name option. ''; diff --git a/nixos/modules/services/x11/xautolock.nix b/nixos/modules/services/x11/xautolock.nix index 28fc92024bcb..a614559970e9 100644 --- a/nixos/modules/services/x11/xautolock.nix +++ b/nixos/modules/services/x11/xautolock.nix @@ -26,9 +26,9 @@ in }; locker = mkOption { - default = "xlock"; # default according to `man xautolock` - example = "i3lock -i /path/to/img"; - type = types.string; + default = "${pkgs.xlockmore}/bin/xlock"; # default according to `man xautolock` + example = "${pkgs.i3lock}/bin/i3lock -i /path/to/img"; + type = types.str; description = '' The script to use when automatically locking the computer. @@ -37,8 +37,8 @@ in nowlocker = mkOption { default = null; - example = "i3lock -i /path/to/img"; - type = types.nullOr types.string; + example = "${pkgs.i3lock}/bin/i3lock -i /path/to/img"; + type = types.nullOr types.str; description = '' The script to use when manually locking the computer with xautolock -locknow. @@ -56,10 +56,8 @@ in notifier = mkOption { default = null; - example = literalExample '' - "${pkgs.libnotify}/bin/notify-send \"Locking in 10 seconds\"" - ''; - type = types.nullOr types.string; + example = "${pkgs.libnotify}/bin/notify-send \"Locking in 10 seconds\""; + type = types.nullOr types.str; description = '' Notification script to be used to warn about the pending autolock. @@ -68,8 +66,8 @@ in killer = mkOption { default = null; # default according to `man xautolock` is none - example = "systemctl suspend"; - type = types.nullOr types.string; + example = "${pkgs.systemd}/bin/systemctl suspend"; + type = types.nullOr types.str; description = '' The script to use when nothing has happend for as long as @@ -131,6 +129,12 @@ in assertion = cfg.killer != null -> cfg.killtime >= 10; message = "killtime has to be at least 10 minutes according to `man xautolock`"; } - ]; + ] ++ (lib.flip map [ "locker" "notifier" "nowlocker" "killer" ] + (option: + { + assertion = cfg."${option}" != null -> builtins.substring 0 1 cfg."${option}" == "/"; + message = "Please specify a canonical path for `services.xserver.xautolock.${option}`"; + }) + ); }; } diff --git a/nixos/modules/system/boot/loader/grub/grub.nix b/nixos/modules/system/boot/loader/grub/grub.nix index 9056121fa7d1..0d83391de893 100644 --- a/nixos/modules/system/boot/loader/grub/grub.nix +++ b/nixos/modules/system/boot/loader/grub/grub.nix @@ -110,7 +110,7 @@ in device = mkOption { default = ""; - example = "/dev/hda"; + example = "/dev/disk/by-id/wwn-0x500001234567890a"; type = types.str; description = '' The device on which the GRUB boot loader will be installed. @@ -123,7 +123,7 @@ in devices = mkOption { default = []; - example = [ "/dev/hda" ]; + example = [ "/dev/disk/by-id/wwn-0x500001234567890a" ]; type = types.listOf types.str; description = '' The devices on which the boot loader, GRUB, will be @@ -135,8 +135,8 @@ in mirroredBoots = mkOption { default = [ ]; example = [ - { path = "/boot1"; devices = [ "/dev/sda" ]; } - { path = "/boot2"; devices = [ "/dev/sdb" ]; } + { path = "/boot1"; devices = [ "/dev/disk/by-id/wwn-0x500001234567890a" ]; } + { path = "/boot2"; devices = [ "/dev/disk/by-id/wwn-0x500009876543210a" ]; } ]; description = '' Mirror the boot configuration to multiple partitions and install grub @@ -178,7 +178,7 @@ in devices = mkOption { default = [ ]; - example = [ "/dev/sda" "/dev/sdb" ]; + example = [ "/dev/disk/by-id/wwn-0x500001234567890a" "/dev/disk/by-id/wwn-0x500009876543210a" ]; type = types.listOf types.str; description = '' The path to the devices which will have the GRUB MBR written. diff --git a/nixos/modules/system/boot/luksroot.nix b/nixos/modules/system/boot/luksroot.nix index eefee5a479e7..8b390e1b60c4 100644 --- a/nixos/modules/system/boot/luksroot.nix +++ b/nixos/modules/system/boot/luksroot.nix @@ -228,10 +228,6 @@ in [ "aes" "aes_generic" "blowfish" "twofish" "serpent" "cbc" "xts" "lrw" "sha1" "sha256" "sha512" - # workaround until https://marc.info/?l=linux-crypto-vger&m=148783562211457&w=4 is merged - # remove once 'modprobe --show-depends xts' shows ecb as a dependency - "ecb" - (if pkgs.stdenv.system == "x86_64-linux" then "aes_x86_64" else "aes_i586") ]; description = '' @@ -441,7 +437,10 @@ in # Some modules that may be needed for mounting anything ciphered # Also load input_leds to get caps lock light working (#12456) boot.initrd.availableKernelModules = [ "dm_mod" "dm_crypt" "cryptd" "input_leds" ] - ++ luks.cryptoModules; + ++ luks.cryptoModules + # workaround until https://marc.info/?l=linux-crypto-vger&m=148783562211457&w=4 is merged + # remove once 'modprobe --show-depends xts' shows ecb as a dependency + ++ (if builtins.elem "xts" luks.cryptoModules then ["ecb"] else []); # copy the cryptsetup binary and it's dependencies boot.initrd.extraUtilsCommands = '' diff --git a/nixos/release.nix b/nixos/release.nix index ee7dcd985a33..558bbbf9a9d4 100644 --- a/nixos/release.nix +++ b/nixos/release.nix @@ -228,6 +228,7 @@ in rec { tests.boot = callSubTests tests/boot.nix {}; tests.boot-stage1 = callTest tests/boot-stage1.nix {}; tests.borgbackup = callTest tests/borgbackup.nix {}; + tests.buildbot = callTest tests/buildbot.nix {}; tests.cadvisor = callTestOnTheseSystems ["x86_64-linux"] tests/cadvisor.nix {}; tests.chromium = (callSubTestsOnTheseSystems ["x86_64-linux"] tests/chromium.nix {}).stable; tests.cjdns = callTest tests/cjdns.nix {}; @@ -258,7 +259,7 @@ in rec { tests.firefox = callTest tests/firefox.nix {}; tests.firewall = callTest tests/firewall.nix {}; tests.fleet = callTestOnTheseSystems ["x86_64-linux"] tests/fleet.nix {}; - #tests.fwupd = callTest tests/fwupd.nix {}; # build during evaluation + tests.fwupd = callTest tests/fwupd.nix {}; #tests.gitlab = callTest tests/gitlab.nix {}; tests.gitolite = callTest tests/gitolite.nix {}; tests.gjs = callTest tests/gjs.nix {}; @@ -318,6 +319,7 @@ in rec { tests.nfs4 = callTest tests/nfs.nix { version = 4; }; tests.nginx = callTest tests/nginx.nix { }; tests.nghttpx = callTest tests/nghttpx.nix { }; + tests.nix-ssh-serve = callTest tests/nix-ssh-serve.nix { }; tests.novacomd = callTestOnTheseSystems ["x86_64-linux"] tests/novacomd.nix { }; tests.leaps = callTest tests/leaps.nix { }; tests.nsd = callTest tests/nsd.nix {}; @@ -339,6 +341,7 @@ in rec { tests.pumpio = callTest tests/pump.io.nix {}; # tests.quagga = callTest tests/quagga.nix {}; tests.quake3 = callTest tests/quake3.nix {}; + tests.rabbitmq = callTest tests/rabbitmq.nix {}; tests.radicale = callTest tests/radicale.nix {}; tests.rspamd = callSubTests tests/rspamd.nix {}; tests.runInMachine = callTest tests/run-in-machine.nix {}; @@ -360,6 +363,7 @@ in rec { tests.wordpress = callTest tests/wordpress.nix {}; tests.xfce = callTest tests/xfce.nix {}; tests.xmonad = callTest tests/xmonad.nix {}; + tests.xrdp = callTest tests/xrdp.nix {}; tests.yabar = callTest tests/yabar.nix {}; tests.zookeeper = callTest tests/zookeeper.nix {}; diff --git a/nixos/tests/boot-stage1.nix b/nixos/tests/boot-stage1.nix index eeaca9f50edc..b2e74bff6fcd 100644 --- a/nixos/tests/boot-stage1.nix +++ b/nixos/tests/boot-stage1.nix @@ -9,6 +9,7 @@ import ./make-test.nix ({ pkgs, ... }: { kver = config.boot.kernelPackages.kernel.modDirVersion; ksrc = "${kdev}/lib/modules/${kver}/build"; hardeningDisable = [ "pic" ]; + nativeBuildInputs = kdev.moduleBuildDependencies; } '' echo "obj-m += $name.o" > Makefile echo "$source" > "$name.c" diff --git a/nixos/tests/nix-ssh-serve.nix b/nixos/tests/nix-ssh-serve.nix new file mode 100644 index 000000000000..aa366d8612d7 --- /dev/null +++ b/nixos/tests/nix-ssh-serve.nix @@ -0,0 +1,39 @@ +import ./make-test.nix ({ pkgs, lib, ... }: +let inherit (import ./ssh-keys.nix pkgs) + snakeOilPrivateKey snakeOilPublicKey; + ssh-config = builtins.toFile "ssh.conf" '' + UserKnownHostsFile=/dev/null + StrictHostKeyChecking=no + ''; +in + { name = "nix-ssh-serve"; + meta.maintainers = [ lib.maintainers.shlevy ]; + nodes = + { server.nix.sshServe = + { enable = true; + keys = [ snakeOilPublicKey ]; + protocol = "ssh-ng"; + }; + server.nix.package = pkgs.nixUnstable; + client.nix.package = pkgs.nixUnstable; + }; + testScript = '' + startAll; + + $client->succeed("mkdir -m 700 /root/.ssh"); + $client->copyFileFromHost("${ssh-config}", "/root/.ssh/config"); + $client->succeed("cat ${snakeOilPrivateKey} > /root/.ssh/id_ecdsa"); + $client->succeed("chmod 600 /root/.ssh/id_ecdsa"); + + $client->succeed("nix-store --add /etc/machine-id > mach-id-path"); + + $server->waitForUnit("sshd"); + + $client->fail("diff /root/other-store\$(cat mach-id-path) /etc/machine-id"); + # Currently due to shared store this is a noop :( + $client->succeed("nix copy --to ssh-ng://nix-ssh\@server \$(cat mach-id-path)"); + $client->succeed("nix-store --realise \$(cat mach-id-path) --store /root/other-store --substituters ssh-ng://nix-ssh\@server"); + $client->succeed("diff /root/other-store\$(cat mach-id-path) /etc/machine-id"); + ''; + } +) diff --git a/nixos/tests/openssh.nix b/nixos/tests/openssh.nix index 291544996889..b2d254e9d9d9 100644 --- a/nixos/tests/openssh.nix +++ b/nixos/tests/openssh.nix @@ -1,20 +1,7 @@ import ./make-test.nix ({ pkgs, ... }: -let - snakeOilPrivateKey = pkgs.writeText "privkey.snakeoil" '' - -----BEGIN EC PRIVATE KEY----- - MHcCAQEEIHQf/khLvYrQ8IOika5yqtWvI0oquHlpRLTZiJy5dRJmoAoGCCqGSM49 - AwEHoUQDQgAEKF0DYGbBwbj06tA3fd/+yP44cvmwmHBWXZCKbS+RQlAKvLXMWkpN - r1lwMyJZoSGgBHoUahoYjTh9/sJL7XLJtA== - -----END EC PRIVATE KEY----- - ''; - - snakeOilPublicKey = pkgs.lib.concatStrings [ - "ecdsa-sha2-nistp256 AAAAE2VjZHNhLXNoYTItbmlzdHAyNTYAAAAIbmlzdHA" - "yNTYAAABBBChdA2BmwcG49OrQN33f/sj+OHL5sJhwVl2Qim0vkUJQCry1zFpKTa" - "9ZcDMiWaEhoAR6FGoaGI04ff7CS+1yybQ= sakeoil" - ]; - +let inherit (import ./ssh-keys.nix pkgs) + snakeOilPrivateKey snakeOilPublicKey; in { name = "openssh"; meta = with pkgs.stdenv.lib.maintainers; { diff --git a/nixos/tests/postgis.nix b/nixos/tests/postgis.nix index f6ce3fe38ed3..7fe905eb4254 100644 --- a/nixos/tests/postgis.nix +++ b/nixos/tests/postgis.nix @@ -12,7 +12,7 @@ import ./make-test.nix ({ pkgs, ...} : { services.postgresql = let mypg = pkgs.postgresql100; in { enable = true; package = mypg; - extraPlugins = [ (pkgs.postgis.override { postgresql = mypg; }).v_2_4_0 ]; + extraPlugins = [ (pkgs.postgis.override { postgresql = mypg; }) ]; }; }; }; diff --git a/nixos/tests/ssh-keys.nix b/nixos/tests/ssh-keys.nix new file mode 100644 index 000000000000..07d422196efa --- /dev/null +++ b/nixos/tests/ssh-keys.nix @@ -0,0 +1,15 @@ +pkgs: +{ snakeOilPrivateKey = pkgs.writeText "privkey.snakeoil" '' + -----BEGIN EC PRIVATE KEY----- + MHcCAQEEIHQf/khLvYrQ8IOika5yqtWvI0oquHlpRLTZiJy5dRJmoAoGCCqGSM49 + AwEHoUQDQgAEKF0DYGbBwbj06tA3fd/+yP44cvmwmHBWXZCKbS+RQlAKvLXMWkpN + r1lwMyJZoSGgBHoUahoYjTh9/sJL7XLJtA== + -----END EC PRIVATE KEY----- + ''; + + snakeOilPublicKey = pkgs.lib.concatStrings [ + "ecdsa-sha2-nistp256 AAAAE2VjZHNhLXNoYTItbmlzdHAyNTYAAAAIbmlzdHA" + "yNTYAAABBBChdA2BmwcG49OrQN33f/sj+OHL5sJhwVl2Qim0vkUJQCry1zFpKTa" + "9ZcDMiWaEhoAR6FGoaGI04ff7CS+1yybQ= sakeoil" + ]; +} diff --git a/pkgs/applications/altcoins/go-ethereum.nix b/pkgs/applications/altcoins/go-ethereum.nix index f35213a085b1..18a9d043e189 100644 --- a/pkgs/applications/altcoins/go-ethereum.nix +++ b/pkgs/applications/altcoins/go-ethereum.nix @@ -12,6 +12,17 @@ buildGoPackage rec { # Fixes Cgo related build failures (see https://github.com/NixOS/nixpkgs/issues/25959 ) hardeningDisable = [ "fortify" ]; + # Only install binaries in $out, source is not interesting and takes ~50M + outputs = [ "out" ]; + preFixup = '' + export bin="''${out}" + ''; + installPhase = '' + mkdir -p $out/bin $out + dir="$NIX_BUILD_TOP/go/bin" + [ -e "$dir" ] && cp -r $dir $out + ''; + src = fetchFromGitHub { owner = "ethereum"; repo = "go-ethereum"; diff --git a/pkgs/applications/audio/a2jmidid/default.nix b/pkgs/applications/audio/a2jmidid/default.nix index ad12609429f5..d09a10a15b2c 100644 --- a/pkgs/applications/audio/a2jmidid/default.nix +++ b/pkgs/applications/audio/a2jmidid/default.nix @@ -28,6 +28,6 @@ in stdenv.mkDerivation rec { description = "Daemon for exposing legacy ALSA sequencer applications in JACK MIDI system"; license = licenses.gpl2; maintainers = [ maintainers.goibhniu ]; - platforms = platforms.linux; + platforms = [ "i686-linux" "x86_64-linux" ]; }; } diff --git a/pkgs/applications/audio/aacgain/default.nix b/pkgs/applications/audio/aacgain/default.nix index a22866dc031a..32ae107ed9cb 100644 --- a/pkgs/applications/audio/aacgain/default.nix +++ b/pkgs/applications/audio/aacgain/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub }: +{ stdenv, fetchFromGitHub, fetchpatch }: stdenv.mkDerivation { name = "aacgain-1.9.0"; @@ -12,7 +12,19 @@ stdenv.mkDerivation { hardeningDisable = [ "format" ]; + postPatch = '' + ( + cd mp4v2 + patch -p0 < ${fetchpatch { + name = "fix_missing_ptr_deref.patch"; + url = "https://aur.archlinux.org/cgit/aur.git/plain/fix_missing_ptr_deref.patch?h=aacgain-cvs&id=e1a19c920f57063e64bab75cb0d8624731f6e3d7"; + sha256 = "1cq7r005nvmwdjb25z80grcam7jv6k57jnl2bh349mg3ajmslbq9"; + }} + ) + ''; + configurePhase = '' + runHook preConfigure cd mp4v2 ./configure @@ -21,9 +33,11 @@ stdenv.mkDerivation { cd .. ./configure + runHook postConfigure ''; buildPhase = '' + runHook preBuild cd mp4v2 make libmp4v2.la @@ -32,18 +46,18 @@ stdenv.mkDerivation { cd .. make + runHook postBuild ''; installPhase = '' - strip -s aacgain/aacgain - install -vD aacgain/aacgain "$out/bin/aacgain" + install -D aacgain/aacgain "$out/bin/aacgain" ''; - meta = { + meta = with stdenv.lib; { description = "ReplayGain for AAC files"; homepage = https://github.com/mulx/aacgain; - license = stdenv.lib.licenses.gpl2; - platforms = stdenv.lib.platforms.linux; - maintainers = [ stdenv.lib.maintainers.robbinch ]; + license = licenses.gpl2; + platforms = platforms.linux; + maintainers = [ maintainers.robbinch ]; }; } diff --git a/pkgs/applications/audio/ario/default.nix b/pkgs/applications/audio/ario/default.nix index afb3c8342731..a99fb80df723 100644 --- a/pkgs/applications/audio/ario/default.nix +++ b/pkgs/applications/audio/ario/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, gettext, gtk2, expat, intltool, libgcrypt, - libunique, gnutls, libxml2, curl, mpd_clientlib, dbus_glib, libnotify, + libunique, gnutls, libxml2, curl, mpd_clientlib, dbus-glib, libnotify, libsoup, avahi, taglib }: @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig ]; buildInputs = [ gettext gtk2 expat intltool libgcrypt libunique gnutls - libxml2 curl mpd_clientlib dbus_glib libnotify libsoup avahi taglib + libxml2 curl mpd_clientlib dbus-glib libnotify libsoup avahi taglib ]; meta = { diff --git a/pkgs/applications/audio/asunder/default.nix b/pkgs/applications/audio/asunder/default.nix index 99d6357e9216..bb0615df25b8 100644 --- a/pkgs/applications/audio/asunder/default.nix +++ b/pkgs/applications/audio/asunder/default.nix @@ -12,11 +12,11 @@ with stdenv.lib; stdenv.mkDerivation rec { - version = "2.8"; + version = "2.9.2"; name = "asunder-${version}"; src = fetchurl { url = "http://littlesvr.ca/asunder/releases/${name}.tar.bz2"; - sha256 = "1nq9kd4rd4k2kibf57gdbm0zw2gxa234vvvdhxkm8g5bhx5h3iyq"; + sha256 = "0vjbxrrjih4c673sc39wj5whp81xp9kmnwqxwzfnmhkky970rg5r"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/applications/audio/audacious/default.nix b/pkgs/applications/audio/audacious/default.nix index e5e8640b4fd9..6890b53f407d 100644 --- a/pkgs/applications/audio/audacious/default.nix +++ b/pkgs/applications/audio/audacious/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, pkgconfig, wrapGAppsHook, gettext, glib, gtk3 -, libmowgli, dbus_glib, libxml2, xorg, gnome3, alsaLib +, libmowgli, dbus-glib, libxml2, xorg, gnome3, alsaLib , libpulseaudio, libjack2, fluidsynth, libmad, libogg, libvorbis -, libcdio082, libcddb, flac, ffmpeg, mpg123, libcue, libmms, libbs2b +, libcdio, libcddb, flac, ffmpeg, mpg123, libcue, libmms, libbs2b , libsndfile, libmodplug, libsamplerate, soxr, lirc, curl, wavpack , neon, faad2, lame, libnotify, libsidplayfp }: @@ -25,9 +25,9 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - gettext glib gtk3 libmowgli dbus_glib libxml2 + gettext glib gtk3 libmowgli dbus-glib libxml2 xorg.libXcomposite gnome3.defaultIconTheme alsaLib libjack2 - libpulseaudio fluidsynth libmad libogg libvorbis libcdio082 + libpulseaudio fluidsynth libmad libogg libvorbis libcdio libcddb flac ffmpeg mpg123 libcue libmms libbs2b libsndfile libmodplug libsamplerate soxr lirc curl wavpack neon faad2 lame libnotify libsidplayfp diff --git a/pkgs/applications/audio/audacious/qt-5.nix b/pkgs/applications/audio/audacious/qt-5.nix index 353865e8ec04..8910fdc1b0a8 100644 --- a/pkgs/applications/audio/audacious/qt-5.nix +++ b/pkgs/applications/audio/audacious/qt-5.nix @@ -3,7 +3,7 @@ gettext, pkgconfig, qtbase, alsaLib, curl, faad2, ffmpeg, flac, fluidsynth, gdk_pixbuf, lame, libbs2b, - libcddb, libcdio082, libcue, libjack2, libmad, libmms, libmodplug, + libcddb, libcdio, libcue, libjack2, libmad, libmms, libmodplug, libmowgli, libnotify, libogg, libpulseaudio, libsamplerate, libsidplayfp, libsndfile, libvorbis, libxml2, lirc, mpg123, neon, qtmultimedia, soxr, wavpack @@ -46,7 +46,7 @@ mkDerivation { # Plugin dependencies alsaLib curl faad2 ffmpeg flac fluidsynth gdk_pixbuf lame libbs2b libcddb - libcdio082 libcue libjack2 libmad libmms libmodplug libmowgli + libcdio libcue libjack2 libmad libmms libmodplug libmowgli libnotify libogg libpulseaudio libsamplerate libsidplayfp libsndfile libvorbis libxml2 lirc mpg123 neon qtmultimedia soxr wavpack ]; diff --git a/pkgs/applications/audio/audacity/default.nix b/pkgs/applications/audio/audacity/default.nix index 100bb1c54fd1..b0c47972e385 100644 --- a/pkgs/applications/audio/audacity/default.nix +++ b/pkgs/applications/audio/audacity/default.nix @@ -7,12 +7,12 @@ with stdenv.lib; stdenv.mkDerivation rec { - version = "2.2.1"; + version = "2.2.2"; name = "audacity-${version}"; src = fetchurl { url = "https://github.com/audacity/audacity/archive/Audacity-${version}.tar.gz"; - sha256 = "1n05r8b4rnf9fas0py0is8cm97s3h65dgvqkk040aym5d1x6wd7z"; + sha256 = "18q7i77ynihx7xp45lz2lv0k0wrh6736pcrivlpwrxjgbvyqx7km"; }; preConfigure = /* we prefer system-wide libs */ '' diff --git a/pkgs/applications/audio/deadbeef/default.nix b/pkgs/applications/audio/deadbeef/default.nix index ea0bce368a1a..be70443fd4df 100644 --- a/pkgs/applications/audio/deadbeef/default.nix +++ b/pkgs/applications/audio/deadbeef/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, intltool, pkgconfig, fetchpatch, jansson # deadbeef can use either gtk2 or gtk3 , gtk2Support ? false, gtk2 ? null -, gtk3Support ? true, gtk3 ? null, gsettings_desktop_schemas ? null, wrapGAppsHook ? null +, gtk3Support ? true, gtk3 ? null, gsettings-desktop-schemas ? null, wrapGAppsHook ? null # input plugins , vorbisSupport ? true, libvorbis ? null , mp123Support ? true, libmad ? null @@ -30,7 +30,7 @@ assert gtk2Support || gtk3Support; assert gtk2Support -> gtk2 != null; -assert gtk3Support -> gtk3 != null && gsettings_desktop_schemas != null && wrapGAppsHook != null; +assert gtk3Support -> gtk3 != null && gsettings-desktop-schemas != null && wrapGAppsHook != null; assert vorbisSupport -> libvorbis != null; assert mp123Support -> libmad != null; assert flacSupport -> flac != null; @@ -62,7 +62,7 @@ stdenv.mkDerivation rec { buildInputs = with stdenv.lib; [ jansson ] ++ optional gtk2Support gtk2 - ++ optionals gtk3Support [ gtk3 gsettings_desktop_schemas ] + ++ optionals gtk3Support [ gtk3 gsettings-desktop-schemas ] ++ optional vorbisSupport libvorbis ++ optional mp123Support libmad ++ optional flacSupport flac diff --git a/pkgs/applications/audio/deadbeef/plugins/opus.nix b/pkgs/applications/audio/deadbeef/plugins/opus.nix new file mode 100644 index 000000000000..55db00c15bf6 --- /dev/null +++ b/pkgs/applications/audio/deadbeef/plugins/opus.nix @@ -0,0 +1,31 @@ +{ stdenv, fetchFromBitbucket, opusfile, libopus, libogg, openssl, deadbeef }: + +stdenv.mkDerivation rec { + name = "deadbeef-opus-plugin-${version}"; + version = "0.8"; + + src = fetchFromBitbucket { + owner = "Lithopsian"; + repo = "deadbeef-opus"; + rev = "v${version}"; + sha256 = "057rgsw4563gs63k05s7zsdc0n4djxwlbyqabf7c88f23z35ryyi"; + }; + + makeFlags = [ + "PREFIX=$(out)" + ]; + + NIX_CFLAGS_COMPILE = [ + "-I${opusfile}/include/opus" + ]; + + buildInputs = [ deadbeef opusfile libopus libogg openssl ]; + + meta = with stdenv.lib; { + description = "Ogg Opus decoder plugin for the DeaDBeeF music player"; + homepage = https://bitbucket.org/Lithopsian/deadbeef-opus; + license = licenses.gpl2; # There are three files, each licensed under different license: zlib, gpl2Plus and lgpl2 + maintainers = [ maintainers.jtojnar ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/applications/audio/drumkv1/default.nix b/pkgs/applications/audio/drumkv1/default.nix index 6ed6d1ee86a0..4ceafa1e52e8 100644 --- a/pkgs/applications/audio/drumkv1/default.nix +++ b/pkgs/applications/audio/drumkv1/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "drumkv1-${version}"; - version = "0.8.5"; + version = "0.8.6"; src = fetchurl { url = "mirror://sourceforge/drumkv1/${name}.tar.gz"; - sha256 = "06xqqm1ylmpp2s7xk7xav325gc50kxlvh9vf1343b0n3i8xkgjfg"; + sha256 = "0fwxrfyp15a4m77mzz4mwj36mhdrj646whlrkvcys33p2w75f8cq"; }; buildInputs = [ libjack2 alsaLib libsndfile liblo lv2 qt5.qtbase qt5.qttools ]; diff --git a/pkgs/applications/audio/easytag/default.nix b/pkgs/applications/audio/easytag/default.nix index f9c9dc2faef0..1ae9a0e5298e 100644 --- a/pkgs/applications/audio/easytag/default.nix +++ b/pkgs/applications/audio/easytag/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, intltool, gtk3, glib, libid3tag, id3lib, taglib -, libvorbis, libogg, flac, itstool, libxml2, gsettings_desktop_schemas +, libvorbis, libogg, flac, itstool, libxml2, gsettings-desktop-schemas , makeWrapper, gnome3 }: @@ -24,7 +24,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ makeWrapper pkgconfig intltool ]; buildInputs = [ gtk3 glib libid3tag id3lib taglib libvorbis libogg flac - itstool libxml2 gsettings_desktop_schemas gnome3.defaultIconTheme (stdenv.lib.getLib gnome3.dconf) + itstool libxml2 gsettings-desktop-schemas gnome3.defaultIconTheme (stdenv.lib.getLib gnome3.dconf) ]; meta = with stdenv.lib; { diff --git a/pkgs/applications/audio/flacon/default.nix b/pkgs/applications/audio/flacon/default.nix index ab28c43f66cf..cc453347aea4 100644 --- a/pkgs/applications/audio/flacon/default.nix +++ b/pkgs/applications/audio/flacon/default.nix @@ -5,13 +5,13 @@ stdenv.mkDerivation rec { name = "flacon-${version}"; - version = "2.1.1"; + version = "4.0.0"; src = fetchFromGitHub { owner = "flacon"; repo = "flacon"; rev = "v${version}"; - sha256 = "0jazv3d1xaydp2ws1pd5rmga76z5yk74v3a8yqfc8vbb2z6ahimz"; + sha256 = "0l0xbzpy4nnr08z7gqvb4ngrjwzpspa382cbcrpkya3nd40987kr"; }; nativeBuildInputs = [ cmake pkgconfig makeWrapper ]; diff --git a/pkgs/applications/audio/fluidsynth/default.nix b/pkgs/applications/audio/fluidsynth/default.nix index 50689886fdd2..789ee35f260e 100644 --- a/pkgs/applications/audio/fluidsynth/default.nix +++ b/pkgs/applications/audio/fluidsynth/default.nix @@ -5,13 +5,13 @@ stdenv.mkDerivation rec { name = "fluidsynth-${version}"; - version = "1.1.8"; + version = "1.1.9"; src = fetchFromGitHub { owner = "FluidSynth"; repo = "fluidsynth"; rev = "v${version}"; - sha256 = "12q7hv0zvgylsdj1ipssv5zr7ap2y410dxsd63dz22y05fa2hwwd"; + sha256 = "0krvmb1idnf95l2ydzfcb08ayyx3n4m71hf9fgwv3srzaikvpf3q"; }; nativeBuildInputs = [ pkgconfig cmake ]; diff --git a/pkgs/applications/audio/gjay/default.nix b/pkgs/applications/audio/gjay/default.nix index 2d63245fef63..42285ba4bf86 100644 --- a/pkgs/applications/audio/gjay/default.nix +++ b/pkgs/applications/audio/gjay/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, mpd_clientlib, dbus_glib, audacious, gtk2, gsl +{ stdenv, fetchurl, pkgconfig, mpd_clientlib, dbus-glib, audacious, gtk2, gsl , libaudclient }: stdenv.mkDerivation { @@ -11,7 +11,7 @@ stdenv.mkDerivation { nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ mpd_clientlib dbus_glib audacious gtk2 gsl libaudclient ]; + buildInputs = [ mpd_clientlib dbus-glib audacious gtk2 gsl libaudclient ]; hardeningDisable = [ "format" ]; diff --git a/pkgs/applications/audio/gmpc/default.nix b/pkgs/applications/audio/gmpc/default.nix index 4bd57e15fe5f..c2adc58f9ce5 100644 --- a/pkgs/applications/audio/gmpc/default.nix +++ b/pkgs/applications/audio/gmpc/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, libtool, intltool, pkgconfig, glib , gtk2, curl, mpd_clientlib, libsoup, gob2, vala, libunique -, libSM, libICE, sqlite, hicolor_icon_theme, wrapGAppsHook +, libSM, libICE, sqlite, hicolor-icon-theme, wrapGAppsHook }: stdenv.mkDerivation rec { @@ -27,7 +27,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig libtool intltool gob2 vala wrapGAppsHook ]; buildInputs = [ glib gtk2 curl mpd_clientlib libsoup - libunique libmpd libSM libICE sqlite hicolor_icon_theme + libunique libmpd libSM libICE sqlite hicolor-icon-theme ]; meta = with stdenv.lib; { diff --git a/pkgs/applications/audio/gradio/default.nix b/pkgs/applications/audio/gradio/default.nix index 8c2987352fbb..d111502651ed 100644 --- a/pkgs/applications/audio/gradio/default.nix +++ b/pkgs/applications/audio/gradio/default.nix @@ -1,13 +1,13 @@ { stdenv, fetchFromGitHub, pkgconfig , gcc , python3 -, gsettings_desktop_schemas -, desktop_file_utils +, gsettings-desktop-schemas +, desktop-file-utils , glib , gtk3 , intltool , libsoup -, json_glib +, json-glib , wrapGAppsHook , meson , ninja @@ -44,15 +44,15 @@ in stdenv.mkDerivation rec { glib intltool libsoup - json_glib + json-glib gtk3 gst_all_1.gstreamer gst_all_1.gst-plugins-base wrapGAppsHook - desktop_file_utils - gsettings_desktop_schemas + desktop-file-utils + gsettings-desktop-schemas ] ++ gst_plugins; enableParallelBuilding = true; diff --git a/pkgs/applications/audio/gtkpod/default.nix b/pkgs/applications/audio/gtkpod/default.nix index 7ebdce783527..39cd1a444fa8 100644 --- a/pkgs/applications/audio/gtkpod/default.nix +++ b/pkgs/applications/audio/gtkpod/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, pkgconfig, makeWrapper, intltool, libgpod, curl, flac, gnome, gtk3, glib, gettext, perl, perlXMLParser, flex, libglade, libid3tag, - libvorbis, hicolor_icon_theme, gdk_pixbuf }: + libvorbis, hicolor-icon-theme, gdk_pixbuf }: stdenv.mkDerivation rec { version = "2.1.5"; @@ -11,13 +11,13 @@ stdenv.mkDerivation rec { sha256 = "0xisrpx069f7bjkyc8vqxb4k0480jmx1wscqxr6cpq1qj6pchzd5"; }; - propagatedUserEnvPkgs = [ gnome.gnome_themes_standard ]; + propagatedUserEnvPkgs = [ gnome.gnome-themes-standard ]; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ makeWrapper intltool curl gettext perl perlXMLParser flex libgpod libid3tag flac libvorbis gtk3 gdk_pixbuf libglade gnome.anjuta gnome.gdl gnome.defaultIconTheme - hicolor_icon_theme ]; + hicolor-icon-theme ]; patchPhase = '' sed -i 's/which/type -P/' scripts/*.sh @@ -26,7 +26,7 @@ stdenv.mkDerivation rec { preFixup = '' wrapProgram "$out/bin/gtkpod" \ --set GDK_PIXBUF_MODULE_FILE "$GDK_PIXBUF_MODULE_FILE" \ - --prefix XDG_DATA_DIRS : "$XDG_ICON_DIRS:${gnome.gnome_themes_standard}/share:$out/share:$GSETTINGS_SCHEMAS_PATH" + --prefix XDG_DATA_DIRS : "$XDG_ICON_DIRS:${gnome.gnome-themes-standard}/share:$out/share:$GSETTINGS_SCHEMAS_PATH" ''; enableParallelBuilding = true; diff --git a/pkgs/applications/audio/guitarix/default.nix b/pkgs/applications/audio/guitarix/default.nix index dcb61119ae76..bcb301687089 100644 --- a/pkgs/applications/audio/guitarix/default.nix +++ b/pkgs/applications/audio/guitarix/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, gettext, intltool, pkgconfig, python2 -, avahi, bluez, boost, eigen, fftw, glib, glib_networking -, glibmm, gsettings_desktop_schemas, gtkmm2, libjack2 +, avahi, bluez, boost, eigen, fftw, glib, glib-networking +, glibmm, gsettings-desktop-schemas, gtkmm2, libjack2 , ladspaH, libav, librdf, libsndfile, lilv, lv2, serd, sord, sratom , wrapGAppsHook, zita-convolver, zita-resampler , optimizationSupport ? false # Enable support for native CPU extensions @@ -22,8 +22,8 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ gettext intltool wrapGAppsHook pkgconfig python2 ]; buildInputs = [ - avahi bluez boost eigen fftw glib glibmm glib_networking.out - gsettings_desktop_schemas gtkmm2 libjack2 ladspaH libav librdf + avahi bluez boost eigen fftw glib glibmm glib-networking.out + gsettings-desktop-schemas gtkmm2 libjack2 ladspaH libav librdf libsndfile lilv lv2 serd sord sratom zita-convolver zita-resampler ]; diff --git a/pkgs/applications/audio/kid3/default.nix b/pkgs/applications/audio/kid3/default.nix index b5197af64092..24421b527e16 100644 --- a/pkgs/applications/audio/kid3/default.nix +++ b/pkgs/applications/audio/kid3/default.nix @@ -10,11 +10,11 @@ stdenv.mkDerivation rec { name = "kid3-${version}"; - version = "3.4.2"; + version = "3.5.1"; src = fetchurl { url = "mirror://sourceforge/project/kid3/kid3/${version}/${name}.tar.gz"; - sha256 = "0gka4na583015jyqva18g85q7vnkjdk0iji2jp88di3kpvqhf1sw"; + sha256 = "09iryxnhg8d9q36a4brb25bqkjprkx5kl0x7vyy82gxivqk0ihl8"; }; buildInputs = with stdenv.lib; diff --git a/pkgs/applications/audio/meterbridge/default.nix b/pkgs/applications/audio/meterbridge/default.nix index d6ba094f4584..d16107e4c292 100644 --- a/pkgs/applications/audio/meterbridge/default.nix +++ b/pkgs/applications/audio/meterbridge/default.nix @@ -2,12 +2,12 @@ }: stdenv.mkDerivation rec { - version = "0.9.2"; + version = "0.9.3"; name = "meterbridge-${version}"; src = fetchurl { url = "http://plugin.org.uk/meterbridge/${name}.tar.gz"; - sha256 = "0jb6g3kbfyr5yf8mvblnciva2bmc01ijpr51m21r27rqmgi8gj5k"; + sha256 = "0s7n3czfpil94vsd7iblv4xrck9c7zvsz4r3yfbkqcv85pjz1viz"; }; patches = [ ./buf_rect.patch ./fix_build_with_gcc-5.patch]; diff --git a/pkgs/applications/audio/mopidy-iris/default.nix b/pkgs/applications/audio/mopidy-iris/default.nix index 219b04b4ec41..cb99f9b5dbe5 100644 --- a/pkgs/applications/audio/mopidy-iris/default.nix +++ b/pkgs/applications/audio/mopidy-iris/default.nix @@ -1,23 +1,26 @@ { stdenv, pythonPackages, mopidy, mopidy-local-images }: pythonPackages.buildPythonApplication rec { - name = "mopidy-iris-${version}"; - version = "3.12.4"; + pname = "Mopidy-Iris"; + version = "3.14.0"; src = pythonPackages.fetchPypi { - inherit version; - pname = "Mopidy-Iris"; - sha256 = "0k64rfnp5b4rybb396zzx12wnnca43a8l1s6s6dr6cflgk9aws87"; + inherit pname version; + sha256 = "2c0ec5138e554e91d299ac72a7049bc00d77770a08c16c17e1a9df7f8ef42feb"; }; propagatedBuildInputs = [ mopidy mopidy-local-images - pythonPackages.configobj - pythonPackages.pylast - pythonPackages.spotipy - pythonPackages.raven - ]; + ] ++ (with pythonPackages; [ + configobj + pylast + spotipy + raven + ]); + + # no tests implemented + doCheck = false; meta = with stdenv.lib; { homepage = https://github.com/jaedb/Iris; diff --git a/pkgs/applications/audio/mopidy-moped/default.nix b/pkgs/applications/audio/mopidy-moped/default.nix index c8afd4c6290f..3754bf763b20 100644 --- a/pkgs/applications/audio/mopidy-moped/default.nix +++ b/pkgs/applications/audio/mopidy-moped/default.nix @@ -1,18 +1,19 @@ -{ stdenv, fetchurl, pythonPackages, mopidy, glibcLocales }: +{ stdenv, pythonPackages, mopidy, glibcLocales }: pythonPackages.buildPythonApplication rec { - name = "mopidy-moped-${version}"; - version = "0.6.0"; + pname = "Mopidy-Moped"; + version = "0.7.1"; - src = fetchurl { - url = "https://github.com/martijnboland/moped/archive/v${version}.tar.gz"; - sha256 = "0xff8y1kc7rwwsd7ppgbvywf6i8lchjwbxjisfl1kmilwsb166yr"; + src = pythonPackages.fetchPypi { + inherit pname version; + sha256 = "15461174037d87af93dd59a236d4275c5abf71cea0670ffff24a7d0399a8a2e4"; }; LC_ALL = "en_US.UTF-8"; buildInputs = [ glibcLocales ]; propagatedBuildInputs = [ mopidy ]; + # no tests implemented doCheck = false; meta = with stdenv.lib; { diff --git a/pkgs/applications/audio/mopidy-mopify/default.nix b/pkgs/applications/audio/mopidy-mopify/default.nix index 0cb076556c70..d55e711cf330 100644 --- a/pkgs/applications/audio/mopidy-mopify/default.nix +++ b/pkgs/applications/audio/mopidy-mopify/default.nix @@ -1,17 +1,17 @@ { stdenv, fetchurl, pythonPackages, mopidy }: pythonPackages.buildPythonApplication rec { - name = "mopidy-mopify-${version}"; + pname = "Mopidy-Mopify"; + version = "1.6.1"; - version = "1.5.17"; - - src = fetchurl { - url = "https://github.com/dirkgroenen/mopidy-mopify/archive/${version}.tar.gz"; - sha256 = "1qi7f5i87ygn486gxc84njl22y84xrwabpz58y5a1hw7z1lp7l8s"; + src = pythonPackages.fetchPypi { + inherit pname version; + sha256 = "93ad2b3d38b1450c8f2698bb908b0b077a96b3f64cdd6486519e518132e23a5c"; }; propagatedBuildInputs = with pythonPackages; [ mopidy configobj ]; + # no tests implemented doCheck = false; meta = with stdenv.lib; { diff --git a/pkgs/applications/audio/mopidy/default.nix b/pkgs/applications/audio/mopidy/default.nix index 8541ec6e2727..0018f17cac0e 100644 --- a/pkgs/applications/audio/mopidy/default.nix +++ b/pkgs/applications/audio/mopidy/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub, pythonPackages, wrapGAppsHook -, gst_all_1, glib_networking, gobjectIntrospection +, gst_all_1, glib-networking, gobjectIntrospection }: pythonPackages.buildPythonApplication rec { @@ -18,7 +18,7 @@ pythonPackages.buildPythonApplication rec { buildInputs = with gst_all_1; [ gst-plugins-base gst-plugins-good gst-plugins-ugly gst-plugins-bad - glib_networking gobjectIntrospection + glib-networking gobjectIntrospection ]; propagatedBuildInputs = with pythonPackages; [ diff --git a/pkgs/applications/audio/mp3blaster/default.nix b/pkgs/applications/audio/mp3blaster/default.nix index 96b3533a6f5c..ed7a4e786f07 100644 --- a/pkgs/applications/audio/mp3blaster/default.nix +++ b/pkgs/applications/audio/mp3blaster/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, ncurses }: +{ stdenv, fetchFromGitHub, ncurses, libvorbis }: stdenv.mkDerivation rec { version = "3.2.6"; @@ -12,7 +12,10 @@ stdenv.mkDerivation rec { sha256 = "0pzwml3yhysn8vyffw9q9p9rs8gixqkmg4n715vm23ib6wxbliqs"; }; - buildInputs = [ ncurses ]; + buildInputs = [ + ncurses + libvorbis + ]; buildFlags = [ "CXXFLAGS=-Wno-narrowing" ]; diff --git a/pkgs/applications/audio/padthv1/default.nix b/pkgs/applications/audio/padthv1/default.nix index 3561deb1c736..779374aaa080 100644 --- a/pkgs/applications/audio/padthv1/default.nix +++ b/pkgs/applications/audio/padthv1/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "padthv1-${version}"; - version = "0.8.5"; + version = "0.8.6"; src = fetchurl { url = "mirror://sourceforge/padthv1/${name}.tar.gz"; - sha256 = "0dyrllxgd74nknixjcz6n7m4gw70v246s8z1qss7zfl5yllhb712"; + sha256 = "1mikab2f9n5q1sfgnp3sbm1rf3v57k4085lsgh0a5gzga2h4hwxq"; }; buildInputs = [ libjack2 alsaLib libsndfile liblo lv2 qt5.qtbase qt5.qttools fftw ]; diff --git a/pkgs/applications/audio/pamix/default.nix b/pkgs/applications/audio/pamix/default.nix index dbf3cd92b5d0..cc4a781ef66c 100644 --- a/pkgs/applications/audio/pamix/default.nix +++ b/pkgs/applications/audio/pamix/default.nix @@ -1,19 +1,23 @@ { stdenv, fetchFromGitHub -, autoreconfHook, autoconf-archive, pkgconfig +, pkgconfig, cmake , libpulseaudio, ncurses }: stdenv.mkDerivation rec { name = "pamix-${version}"; - version = "1.5"; + version = "1.6"; src = fetchFromGitHub { owner = "patroclos"; repo = "pamix"; rev = version; - sha256 = "1d6b0iv8p73bwq88kdaanm4igvmp9rkq082vyaxpc67mz398yjbp"; + sha256 = "1d44ggnwkf2gff62959pj45v3a2k091q8v154wc5pmzamam458wp"; }; - nativeBuildInputs = [ autoreconfHook autoconf-archive pkgconfig ]; + preConfigure = '' + substituteInPlace CMakeLists.txt --replace "/etc" "$out/etc/xdg" + ''; + + nativeBuildInputs = [ cmake pkgconfig ]; buildInputs = [ libpulseaudio ncurses ]; meta = with stdenv.lib; { diff --git a/pkgs/applications/audio/pamixer/default.nix b/pkgs/applications/audio/pamixer/default.nix index fa25a474c1df..3e159c843843 100644 --- a/pkgs/applications/audio/pamixer/default.nix +++ b/pkgs/applications/audio/pamixer/default.nix @@ -3,11 +3,11 @@ stdenv.mkDerivation rec { name = "pamixer-${version}"; - version = "1.3"; + version = "1.3.1"; src = fetchurl { url = "https://github.com/cdemoulins/pamixer/archive/${version}.tar.gz"; - sha256 = "091676ww4jbf4jr728gjfk7fkd5nisy70mr6f3s1p7n05hjpmfjx"; + sha256 = "1lsvb4xk1dq762w9c0jn7xvj3v1lzppql9mj1b55fhzdypbrkm6x"; }; buildInputs = [ boost libpulseaudio ]; diff --git a/pkgs/applications/audio/paprefs/default.nix b/pkgs/applications/audio/paprefs/default.nix index 58054070760b..fe9ed12390a5 100644 --- a/pkgs/applications/audio/paprefs/default.nix +++ b/pkgs/applications/audio/paprefs/default.nix @@ -1,5 +1,5 @@ { fetchurl, stdenv, pkgconfig, pulseaudioFull, gtkmm2, libglademm -, dbus_glib, GConf, gconfmm, intltool }: +, dbus-glib, GConf, gconfmm, intltool }: stdenv.mkDerivation rec { name = "paprefs-0.9.10"; @@ -9,7 +9,7 @@ stdenv.mkDerivation rec { sha256 = "1c5b3sb881szavly220q31g7rvpn94wr7ywlk00hqb9zaikml716"; }; - buildInputs = [ pulseaudioFull gtkmm2 libglademm dbus_glib gconfmm ]; + buildInputs = [ pulseaudioFull gtkmm2 libglademm dbus-glib gconfmm ]; nativeBuildInputs = [ pkgconfig intltool ]; diff --git a/pkgs/applications/audio/patchage/default.nix b/pkgs/applications/audio/patchage/default.nix index 91a270a698e6..8425b48166e6 100644 --- a/pkgs/applications/audio/patchage/default.nix +++ b/pkgs/applications/audio/patchage/default.nix @@ -1,4 +1,4 @@ -{ stdenv, alsaLib, boost, dbus_glib, fetchsvn, ganv, glibmm +{ stdenv, alsaLib, boost, dbus-glib, fetchsvn, ganv, glibmm , gtkmm2, libjack2, pkgconfig, python2 }: @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { }; buildInputs = [ - alsaLib boost dbus_glib ganv glibmm gtkmm2 libjack2 + alsaLib boost dbus-glib ganv glibmm gtkmm2 libjack2 pkgconfig python2 ]; diff --git a/pkgs/applications/audio/pavucontrol/default.nix b/pkgs/applications/audio/pavucontrol/default.nix index 69db9d74ee34..d113b8a49b31 100644 --- a/pkgs/applications/audio/pavucontrol/default.nix +++ b/pkgs/applications/audio/pavucontrol/default.nix @@ -1,5 +1,5 @@ { fetchurl, stdenv, pkgconfig, intltool, libpulseaudio, gtkmm3 -, libcanberra_gtk3, makeWrapper, gnome3 }: +, libcanberra-gtk3, makeWrapper, gnome3 }: stdenv.mkDerivation rec { name = "pavucontrol-3.0"; @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { --prefix XDG_DATA_DIRS : "$XDG_ICON_DIRS" ''; - buildInputs = [ libpulseaudio gtkmm3 libcanberra_gtk3 makeWrapper + buildInputs = [ libpulseaudio gtkmm3 libcanberra-gtk3 makeWrapper gnome3.defaultIconTheme ]; nativeBuildInputs = [ pkgconfig intltool ]; diff --git a/pkgs/applications/audio/picard/default.nix b/pkgs/applications/audio/picard/default.nix index 66f68c066c88..677c60399e52 100644 --- a/pkgs/applications/audio/picard/default.nix +++ b/pkgs/applications/audio/picard/default.nix @@ -1,7 +1,7 @@ { stdenv, python2Packages, fetchurl, gettext, chromaprint }: let - version = "1.4"; + version = "1.4.2"; pythonPackages = python2Packages; in pythonPackages.buildPythonApplication { name = "picard-${version}"; @@ -9,7 +9,7 @@ in pythonPackages.buildPythonApplication { src = fetchurl { url = "http://ftp.musicbrainz.org/pub/musicbrainz/picard/picard-${version}.tar.gz"; - sha256 = "0gi7f1h7jcg7n18cx8iw38sd868viv3w377xmi7cq98f1g76d4h6"; + sha256 = "0d12k40d9fbcn801gp5zdsgvjdrh4g97vda3ga16rmmvfwwfxbgh"; }; buildInputs = [ gettext ]; diff --git a/pkgs/applications/audio/radiotray-ng/default.nix b/pkgs/applications/audio/radiotray-ng/default.nix index 88db09fac86b..60c8f90b6d15 100644 --- a/pkgs/applications/audio/radiotray-ng/default.nix +++ b/pkgs/applications/audio/radiotray-ng/default.nix @@ -11,7 +11,7 @@ , dbus , glibmm , gnome3 -, hicolor_icon_theme +, hicolor-icon-theme , libappindicator-gtk3 , libnotify , libxdg_basedir @@ -54,7 +54,7 @@ stdenv.mkDerivation rec { buildInputs = [ curl boost jsoncpp libbsd pcre - glibmm hicolor_icon_theme gnome3.gsettings_desktop_schemas libappindicator-gtk3 libnotify + glibmm hicolor-icon-theme gnome3.gsettings-desktop-schemas libappindicator-gtk3 libnotify libxdg_basedir lsb-release wxGTK diff --git a/pkgs/applications/audio/rhythmbox/default.nix b/pkgs/applications/audio/rhythmbox/default.nix index 534fd2f0edb1..5190fe37d8a7 100644 --- a/pkgs/applications/audio/rhythmbox/default.nix +++ b/pkgs/applications/audio/rhythmbox/default.nix @@ -7,7 +7,7 @@ , libsoup , gnome3 , tdb -, json_glib +, json-glib , itstool , wrapGAppsHook , gst_all_1 @@ -35,7 +35,7 @@ in stdenv.mkDerivation rec { intltool libsoup tdb - json_glib + json-glib itstool gtk3 diff --git a/pkgs/applications/audio/samplv1/default.nix b/pkgs/applications/audio/samplv1/default.nix index a8a368054966..c2c24c29a13e 100644 --- a/pkgs/applications/audio/samplv1/default.nix +++ b/pkgs/applications/audio/samplv1/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "samplv1-${version}"; - version = "0.8.5"; + version = "0.8.6"; src = fetchurl { url = "mirror://sourceforge/samplv1/${name}.tar.gz"; - sha256 = "1gscwybsbaqbnylmgf2baf71cm2g7a0pd11rqmk3cz9hi3lyjric"; + sha256 = "035bq7yfg1yirsqk63zwkzjw9dxl52lrzq9y0w7nga0vb11xdfij"; }; buildInputs = [ libjack2 alsaLib liblo libsndfile lv2 qt5.qtbase qt5.qttools]; diff --git a/pkgs/applications/audio/snd/default.nix b/pkgs/applications/audio/snd/default.nix index 1932ec3d93bc..3fe8ecfe5468 100644 --- a/pkgs/applications/audio/snd/default.nix +++ b/pkgs/applications/audio/snd/default.nix @@ -4,11 +4,11 @@ }: stdenv.mkDerivation rec { - name = "snd-17.8"; + name = "snd-18.1"; src = fetchurl { url = "mirror://sourceforge/snd/${name}.tar.gz"; - sha256 = "161bx2xgz692iqmsmhv9yi8rvd7y31si4rniizwirwz7q4y4vwvf"; + sha256 = "0wdifvpm54j5fxxp867jnrfdy3jb8iff2mxqvp08plp45zfjv6xh"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/applications/audio/sonata/default.nix b/pkgs/applications/audio/sonata/default.nix index e91c08c30b77..1afb36571bd9 100644 --- a/pkgs/applications/audio/sonata/default.nix +++ b/pkgs/applications/audio/sonata/default.nix @@ -19,8 +19,8 @@ in buildPythonApplication rec { nativeBuildInputs = [ pkgconfig ]; buildInputs = [ intltool wrapGAppsHook - gnome3.gnome_themes_standard gnome3.defaultIconTheme - gnome3.gsettings_desktop_schemas + gnome3.gnome-themes-standard gnome3.defaultIconTheme + gnome3.gsettings-desktop-schemas ]; postPatch = '' @@ -28,7 +28,7 @@ in buildPythonApplication rec { sed -i '/localmpd/d' sonata/consts.py ''; - propagatedUserEnvPkgs = [ gnome3.gnome_themes_standard ]; + propagatedUserEnvPkgs = [ gnome3.gnome-themes-standard ]; propagatedBuildInputs = [ gobjectIntrospection gtk3 pygobject3 diff --git a/pkgs/applications/audio/sound-juicer/default.nix b/pkgs/applications/audio/sound-juicer/default.nix index cbcdc0ecccd7..c68f2cd4a35f 100644 --- a/pkgs/applications/audio/sound-juicer/default.nix +++ b/pkgs/applications/audio/sound-juicer/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, gtk3, intltool, itstool, libxml2, brasero -, libcanberra_gtk3, gnome3, gst_all_1, libmusicbrainz5, libdiscid, isocodes +, libcanberra-gtk3, gnome3, gst_all_1, libmusicbrainz5, libdiscid, isocodes , makeWrapper }: let @@ -16,8 +16,8 @@ in stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ gtk3 intltool itstool libxml2 brasero libcanberra_gtk3 - gnome3.gsettings_desktop_schemas libmusicbrainz5 libdiscid isocodes + buildInputs = [ gtk3 intltool itstool libxml2 brasero libcanberra-gtk3 + gnome3.gsettings-desktop-schemas libmusicbrainz5 libdiscid isocodes makeWrapper (stdenv.lib.getLib gnome3.dconf) gst_all_1.gstreamer gst_all_1.gst-plugins-base gst_all_1.gst-plugins-good gst_all_1.gst-plugins-bad @@ -27,7 +27,7 @@ in stdenv.mkDerivation rec { preFixup = '' for f in $out/bin/* $out/libexec/*; do wrapProgram "$f" \ - --prefix XDG_DATA_DIRS : "${gnome3.gnome_themes_standard}/share:$XDG_ICON_DIRS:$GSETTINGS_SCHEMAS_PATH" \ + --prefix XDG_DATA_DIRS : "${gnome3.gnome-themes-standard}/share:$XDG_ICON_DIRS:$GSETTINGS_SCHEMAS_PATH" \ --prefix GST_PLUGIN_SYSTEM_PATH_1_0 : "$GST_PLUGIN_SYSTEM_PATH_1_0" \ --prefix GIO_EXTRA_MODULES : "${stdenv.lib.getLib gnome3.dconf}/lib/gio/modules" done diff --git a/pkgs/applications/audio/synthv1/default.nix b/pkgs/applications/audio/synthv1/default.nix index 8385e1cc5a4d..651e56d0e8e3 100644 --- a/pkgs/applications/audio/synthv1/default.nix +++ b/pkgs/applications/audio/synthv1/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "synthv1-${version}"; - version = "0.8.5"; + version = "0.8.6"; src = fetchurl { url = "mirror://sourceforge/synthv1/${name}.tar.gz"; - sha256 = "0mvrqk6jy7h2wg442ixwm49w7x15rs4066c2ljrz4kvxlzp5z69i"; + sha256 = "141ah1gnv5r2k846v5ay15q9q90h01p74240a56vlxqh20z43g92"; }; buildInputs = [ qt5.qtbase qt5.qttools libjack2 alsaLib liblo lv2 ]; diff --git a/pkgs/applications/audio/tomahawk/default.nix b/pkgs/applications/audio/tomahawk/default.nix index 2203586c26e9..4140c5da5a45 100644 --- a/pkgs/applications/audio/tomahawk/default.nix +++ b/pkgs/applications/audio/tomahawk/default.nix @@ -4,12 +4,12 @@ , enableXMPP ? true, libjreen ? null , enableKDE ? false, kdelibs4 ? null -, enableTelepathy ? false, telepathy_qt ? null +, enableTelepathy ? false, telepathy-qt ? null }: assert enableXMPP -> libjreen != null; assert enableKDE -> kdelibs4 != null; -assert enableTelepathy -> telepathy_qt != null; +assert enableTelepathy -> telepathy-qt != null; stdenv.mkDerivation rec { name = "tomahawk-${version}"; @@ -32,7 +32,7 @@ stdenv.mkDerivation rec { makeWrapper ] ++ stdenv.lib.optional enableXMPP libjreen ++ stdenv.lib.optional enableKDE kdelibs4 - ++ stdenv.lib.optional enableTelepathy telepathy_qt; + ++ stdenv.lib.optional enableTelepathy telepathy-qt; postInstall = let pluginPath = stdenv.lib.concatStringsSep ":" [ diff --git a/pkgs/applications/backup/crashplan/crashplan-small-business.nix b/pkgs/applications/backup/crashplan/crashplan-small-business.nix index 42729f4aad18..9bed504103a1 100644 --- a/pkgs/applications/backup/crashplan/crashplan-small-business.nix +++ b/pkgs/applications/backup/crashplan/crashplan-small-business.nix @@ -6,14 +6,14 @@ maxRam ? "1024m" }: stdenv.mkDerivation rec { - version = "6.6.0"; - rev = "1506661200660_4347"; + version = "6.7.0"; + rev = "1512021600670_4503"; pname = "CrashPlanSmb"; name = "${pname}_${version}_${rev}"; src = fetchurl { url = "https://web-eam-msp.crashplanpro.com/client/installers/${name}_Linux.tgz"; - sha256 = "1zzx60fpmi2nlzpq80x4hfgspsrgd7ycfcvc6w391wxr0qzf2i9k"; + sha256 = "0f7ykfxaqjlvv4hv12yc5z8y1vjsysdblv53byml7i1fy1r0q26q"; }; nativeBuildInputs = [ makeWrapper cpio nodePackages.asar ]; diff --git a/pkgs/applications/backup/deja-dup/default.nix b/pkgs/applications/backup/deja-dup/default.nix index 7382e84fa073..e46ffec39795 100644 --- a/pkgs/applications/backup/deja-dup/default.nix +++ b/pkgs/applications/backup/deja-dup/default.nix @@ -1,8 +1,8 @@ { stdenv, fetchurl, meson, ninja, pkgconfig, vala_0_38, gettext , gnome3, libnotify, intltool, itstool, glib, gtk3, libxml2 , coreutils, libsecret, pcre, libxkbcommon, wrapGAppsHook -, libpthreadstubs, libXdmcp, epoxy, at_spi2_core, dbus, libgpgerror -, appstream-glib, desktop_file_utils, duplicity +, libpthreadstubs, libXdmcp, epoxy, at-spi2-core, dbus, libgpgerror +, appstream-glib, desktop-file-utils, duplicity }: stdenv.mkDerivation rec { @@ -29,13 +29,13 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ meson ninja pkgconfig vala_0_38 gettext intltool itstool - appstream-glib desktop_file_utils libxml2 wrapGAppsHook + appstream-glib desktop-file-utils libxml2 wrapGAppsHook ]; buildInputs = [ libnotify gnome3.libpeas glib gtk3 libsecret pcre libxkbcommon libpthreadstubs libXdmcp epoxy gnome3.nautilus - at_spi2_core dbus gnome3.gnome_online_accounts libgpgerror + at-spi2-core dbus gnome3.gnome-online-accounts libgpgerror ]; propagatedUserEnvPkgs = [ duplicity ]; diff --git a/pkgs/applications/display-managers/lightdm-gtk-greeter/default.nix b/pkgs/applications/display-managers/lightdm-gtk-greeter/default.nix index 13740dd9dfdb..486a52ef6672 100644 --- a/pkgs/applications/display-managers/lightdm-gtk-greeter/default.nix +++ b/pkgs/applications/display-managers/lightdm-gtk-greeter/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, lightdm, pkgconfig, intltool -, hicolor_icon_theme, makeWrapper +, hicolor-icon-theme, makeWrapper , useGTK2 ? false, gtk2, gtk3 # gtk3 seems better supported , exo }: @@ -9,14 +9,14 @@ let ver_branch = "2.0"; - version = "2.0.3"; + version = "2.0.4"; in stdenv.mkDerivation rec { name = "lightdm-gtk-greeter-${version}"; src = fetchurl { url = "${meta.homepage}/${ver_branch}/${version}/+download/${name}.tar.gz"; - sha256 = "0c6v2myzqj8nzpcqyvbab7c66kwgcshw2chn5r6dhm7xrx19bcrx"; + sha256 = "1svbyq2l3l2d72k10nw79jz940rqsskryaim2viy6jfpv9k5jfv1"; }; nativeBuildInputs = [ pkgconfig ]; @@ -37,7 +37,7 @@ stdenv.mkDerivation rec { substituteInPlace "$out/share/xgreeters/lightdm-gtk-greeter.desktop" \ --replace "Exec=lightdm-gtk-greeter" "Exec=$out/sbin/lightdm-gtk-greeter" wrapProgram "$out/sbin/lightdm-gtk-greeter" \ - --prefix XDG_DATA_DIRS ":" "${hicolor_icon_theme}/share" + --prefix XDG_DATA_DIRS ":" "${hicolor-icon-theme}/share" ''; meta = with stdenv.lib; { diff --git a/pkgs/applications/editors/android-studio/default.nix b/pkgs/applications/editors/android-studio/default.nix index bf8a5f15c2f2..4a71153cf911 100644 --- a/pkgs/applications/editors/android-studio/default.nix +++ b/pkgs/applications/editors/android-studio/default.nix @@ -29,9 +29,9 @@ in rec { # linux-beta-bundle preview = mkStudio { pname = "android-studio-preview"; - version = "3.1.0.11"; # "Android Studio 3.1 Beta 3" - build = "173.4595152"; - sha256Hash = "0106ggrf4mkxx3a2dn02km8rdq23sf15ifysykcay29skgdmq6wx"; + version = "3.1.0.12"; # "Android Studio 3.1 Beta 4" + build = "173.4615496"; + sha256Hash = "0rp0vg5hwv7kdrirydvnwznpfwibwwm2dxsbhbxfkyahph10ly72"; meta = stable.meta // { description = "The Official IDE for Android (preview version)"; diff --git a/pkgs/applications/editors/atom/default.nix b/pkgs/applications/editors/atom/default.nix index 39b4b2e045ed..2194ff226b56 100644 --- a/pkgs/applications/editors/atom/default.nix +++ b/pkgs/applications/editors/atom/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "atom-${version}"; - version = "1.23.3"; + version = "1.24.0"; src = fetchurl { url = "https://github.com/atom/atom/releases/download/v${version}/atom-amd64.deb"; - sha256 = "0vq0pics8ajjqwqlk396dxl10k80059f9bik0j4wj2cals42bifc"; + sha256 = "1yvwz4lkf7ya775h3fvrg1wkdc30321j666vfjlmax5mbcjrxkzf"; name = "${name}.deb"; }; diff --git a/pkgs/applications/editors/atom/env.nix b/pkgs/applications/editors/atom/env.nix index 1c9c5bc78ef2..c7e1dfe27364 100644 --- a/pkgs/applications/editors/atom/env.nix +++ b/pkgs/applications/editors/atom/env.nix @@ -1,11 +1,11 @@ { stdenv, lib, zlib, glib, alsaLib, dbus, gtk2, atk, pango, freetype, fontconfig -, libgnome_keyring3, gdk_pixbuf, gvfs, cairo, cups, expat, libgpgerror, nspr +, libgnome-keyring3, gdk_pixbuf, gvfs, cairo, cups, expat, libgpgerror, nspr , gconf, nss, xorg, libcap, systemd, libnotify, libsecret }: let packages = [ - stdenv.cc.cc zlib glib dbus gtk2 atk pango freetype libgnome_keyring3 + stdenv.cc.cc zlib glib dbus gtk2 atk pango freetype libgnome-keyring3 fontconfig gdk_pixbuf cairo cups expat libgpgerror alsaLib nspr gconf nss xorg.libXrender xorg.libX11 xorg.libXext xorg.libXdamage xorg.libXtst xorg.libXcomposite xorg.libXi xorg.libXfixes xorg.libXrandr diff --git a/pkgs/applications/editors/eclipse/build-eclipse.nix b/pkgs/applications/editors/eclipse/build-eclipse.nix index 6a5bc3e7b0f8..23e4449ee2eb 100644 --- a/pkgs/applications/editors/eclipse/build-eclipse.nix +++ b/pkgs/applications/editors/eclipse/build-eclipse.nix @@ -1,5 +1,5 @@ { stdenv, makeDesktopItem, freetype, fontconfig, libX11, libXrender -, zlib, jdk, glib, gtk2, libXtst, gsettings_desktop_schemas, webkitgtk24x-gtk2 +, zlib, jdk, glib, gtk2, libXtst, gsettings-desktop-schemas, webkitgtk24x-gtk2 , makeWrapper, ... }: { name, src ? builtins.getAttr stdenv.system sources, sources ? null, description }: @@ -18,7 +18,7 @@ stdenv.mkDerivation rec { }; buildInputs = [ - fontconfig freetype glib gsettings_desktop_schemas gtk2 jdk libX11 + fontconfig freetype glib gsettings-desktop-schemas gtk2 jdk libX11 libXrender libXtst makeWrapper zlib ] ++ stdenv.lib.optional (webkitgtk24x-gtk2 != null) webkitgtk24x-gtk2; diff --git a/pkgs/applications/editors/eclipse/default.nix b/pkgs/applications/editors/eclipse/default.nix index fef508bdf1e5..c69686a0967d 100644 --- a/pkgs/applications/editors/eclipse/default.nix +++ b/pkgs/applications/editors/eclipse/default.nix @@ -1,6 +1,6 @@ { stdenv, lib, fetchurl, makeDesktopItem, makeWrapper , freetype, fontconfig, libX11, libXext, libXrender, zlib -, glib, gtk2, libXtst, jdk, gsettings_desktop_schemas +, glib, gtk2, libXtst, jdk, gsettings-desktop-schemas , webkitgtk24x-gtk2 ? null # for internal web browser , buildEnv, writeText, runCommand , callPackage @@ -15,7 +15,7 @@ rec { buildEclipse = import ./build-eclipse.nix { inherit stdenv makeDesktopItem freetype fontconfig libX11 libXrender zlib - jdk glib gtk2 libXtst gsettings_desktop_schemas webkitgtk24x-gtk2 + jdk glib gtk2 libXtst gsettings-desktop-schemas webkitgtk24x-gtk2 makeWrapper; }; diff --git a/pkgs/applications/editors/eclipse/plugins.nix b/pkgs/applications/editors/eclipse/plugins.nix index 4f82696efd58..6d04e8717954 100644 --- a/pkgs/applications/editors/eclipse/plugins.nix +++ b/pkgs/applications/editors/eclipse/plugins.nix @@ -409,11 +409,11 @@ rec { jsonedit = buildEclipsePlugin rec { name = "jsonedit-${version}"; - version = "1.0.1"; + version = "1.0.2"; srcFeature = fetchurl { url = "https://boothen.github.io/Json-Eclipse-Plugin/features/jsonedit-feature_${version}.jar"; - sha256 = "19221409wzcsrlm2fqf6mrxzb5ip1x6y5ba8anw788p7aaz1w30k"; + sha256 = "0zh9ihvaji2v4d4980va8p1c38x5dn2mcw74qmqkwxlz4nglpsr0"; }; srcPlugins = @@ -425,13 +425,13 @@ rec { }; in map fetch [ - { n = "core"; h = "05ipjbh9yz97zhqaqq6cja3zz44n0dn40ms13qnlgf4bxyaf0f6w"; } - { n = "editor"; h = "1i71rh2fd5hsx6gygnafz2gjz4hlb0ckazxn0maxmnlx4p5apjql"; } - { n = "folding"; h = "13p8vqdna23ln82w1jgchm59375f1ky0p2b1v7jih55yfhw1ymam"; } - { n = "model"; h = "0llswhsd58f0rjb9canjncavq4z7q8zidn26yl5gradbbz580p6w"; } - { n = "outline"; h = "1rs8g0iv2kklbl7j0p6nr26m6ii89yyr9bpi05mh21xva40pzkl5"; } - { n = "preferences"; h = "0vs074ahhiba7if43ryf9m8xd81sqj9grppy0pzcnkkdkbk870n0"; } - { n = "text"; h = "0nqpzjw8hhvh9jlpldpmcmg83a170wjdabgsvjq207j12jkvfiqq"; } + { n = "core"; h = "0zc1jpda6sviazsgvvig8zk2zmz0ac1mch5qs8lbcbdmrpq732ni"; } + { n = "editor"; h = "06k2mx7ka0bn0i8dfbv89jna9kmy8wnlwkg9yp1n1pgqmr01944s"; } + { n = "folding"; h = "1525blyhrl495vz5r98dyfws6kcgnhmyf9qgm5vkplhb27474yca"; } + { n = "model"; h = "0rnnkdl3hrp0sxchfzfad97ya5swsw56wfb5zvjwffbby4vln8fd"; } + { n = "outline"; h = "06bday90a7sdpv4idp69m2831z3r99q248n2avw2npc3gzkfy3kl"; } + { n = "preferences"; h = "1d9pcnq6j5p2smkfldb9dw8gdw5nqlmpcy9kh5n34jcyzf37cdac"; } + { n = "text"; h = "0r3g2qhnhl6misi0rrmw152gw0nb7zlcjy7019qvprn9mhwn1n84"; } ]; propagatedBuildInputs = [ antlr-runtime_4_5 ]; diff --git a/pkgs/applications/editors/emacs-modes/elpa-generated.nix b/pkgs/applications/editors/emacs-modes/elpa-generated.nix index 7264dcb92a37..ac50e829100a 100644 --- a/pkgs/applications/editors/emacs-modes/elpa-generated.nix +++ b/pkgs/applications/editors/emacs-modes/elpa-generated.nix @@ -400,10 +400,10 @@ }) {}; company = callPackage ({ elpaBuild, emacs, fetchurl, lib }: elpaBuild { pname = "company"; - version = "0.9.4"; + version = "0.9.6"; src = fetchurl { - url = "https://elpa.gnu.org/packages/company-0.9.4.tar"; - sha256 = "1wm2nzjfn9cmjb6f5yvawrss7pg1r0swwwqqx602wg8hjrsiabay"; + url = "https://elpa.gnu.org/packages/company-0.9.6.tar"; + sha256 = "0w1jqhs87g0sqhv2iw6a5i8f4yjkrc65fb3h6vyv11sb8kfnhda7"; }; packageRequires = [ emacs ]; meta = { @@ -713,10 +713,10 @@ ebdb = callPackage ({ cl-lib ? null, elpaBuild, emacs, fetchurl, lib, seq }: elpaBuild { pname = "ebdb"; - version = "0.4.2"; + version = "0.4.3"; src = fetchurl { - url = "https://elpa.gnu.org/packages/ebdb-0.4.2.tar"; - sha256 = "1j9hgxa6csj3iz5vrl22xvhl9lxhig0n1cixgzhs1sb3z3nn2li6"; + url = "https://elpa.gnu.org/packages/ebdb-0.4.3.tar"; + sha256 = "1xq0nhhgzgzrvxbb0lgpz71rfd0dcjakh87wg8wi3cpiw9w7zx41"; }; packageRequires = [ cl-lib emacs seq ]; meta = { @@ -768,10 +768,10 @@ el-search = callPackage ({ cl-print, elpaBuild, emacs, fetchurl, lib, stream }: elpaBuild { pname = "el-search"; - version = "1.5.4"; + version = "1.6"; src = fetchurl { - url = "https://elpa.gnu.org/packages/el-search-1.5.4.tar"; - sha256 = "1k0makrk3p6hknpnr3kbiszqzw3rpw18gnx2m8scr9vv0wif4qmk"; + url = "https://elpa.gnu.org/packages/el-search-1.6.tar"; + sha256 = "18pv2l6rl8f9x0yjn4iyf6g94c0ly5mizqg0vxr3m420bkbyk95h"; }; packageRequires = [ cl-print emacs stream ]; meta = { @@ -861,10 +861,10 @@ }) {}; exwm = callPackage ({ elpaBuild, fetchurl, lib, xelb }: elpaBuild { pname = "exwm"; - version = "0.16"; + version = "0.17"; src = fetchurl { - url = "https://elpa.gnu.org/packages/exwm-0.16.tar"; - sha256 = "0c4w5k9lzqj8yzhdqipdb4fs7ld2qklc6s137104jnfdvmrwcv2i"; + url = "https://elpa.gnu.org/packages/exwm-0.17.tar"; + sha256 = "03vgrrrc1d3xr9ydl1ydvmqnvpnzg858dzdky2nd65h9ssyp2f5f"; }; packageRequires = [ xelb ]; meta = { @@ -1637,10 +1637,10 @@ }) {}; paced = callPackage ({ async, elpaBuild, emacs, fetchurl, lib }: elpaBuild { pname = "paced"; - version = "1.1.2"; + version = "1.1.3"; src = fetchurl { - url = "https://elpa.gnu.org/packages/paced-1.1.2.tar"; - sha256 = "1hxbzlzmlndj2gs9n741whi7rj6vbcnxdn89lg2l0997pqmsx58y"; + url = "https://elpa.gnu.org/packages/paced-1.1.3.tar"; + sha256 = "1gaszf68h0nnv6p6yzv48m24csw6v479nsq0f02y6slixxaflnwl"; }; packageRequires = [ async emacs ]; meta = { @@ -1704,10 +1704,10 @@ python = callPackage ({ cl-lib ? null, elpaBuild, emacs, fetchurl, lib }: elpaBuild { pname = "python"; - version = "0.25.2"; + version = "0.26"; src = fetchurl { - url = "https://elpa.gnu.org/packages/python-0.25.2.el"; - sha256 = "1ac2ipyg49sb0lz3n0ykj2s6592abd38l5d1cpbmv73j13l8zq5i"; + url = "https://elpa.gnu.org/packages/python-0.26.el"; + sha256 = "197sq42xd4ryqq2zy1802pns6wf6n4vzx90yxgn1zzqpwffpv317"; }; packageRequires = [ cl-lib emacs ]; meta = { @@ -2400,10 +2400,10 @@ xelb = callPackage ({ cl-generic, elpaBuild, emacs, fetchurl, lib }: elpaBuild { pname = "xelb"; - version = "0.12"; + version = "0.13"; src = fetchurl { - url = "https://elpa.gnu.org/packages/xelb-0.12.tar"; - sha256 = "0i9n0f3ibj4a5pwcsvwrah9m0fz32m0x6a9wsmjn3li20v8pcb81"; + url = "https://elpa.gnu.org/packages/xelb-0.13.tar"; + sha256 = "0sfygy6ihjwszhn6a81fz2yn70rr7vpygl7z49vz4rsd8s0fdgjc"; }; packageRequires = [ cl-generic emacs ]; meta = { diff --git a/pkgs/applications/editors/emacs-modes/melpa-generated.nix b/pkgs/applications/editors/emacs-modes/melpa-generated.nix index b66c988580e2..a24cb9e4910b 100644 --- a/pkgs/applications/editors/emacs-modes/melpa-generated.nix +++ b/pkgs/applications/editors/emacs-modes/melpa-generated.nix @@ -229,27 +229,6 @@ license = lib.licenses.free; }; }) {}; - ac-anaconda = callPackage ({ anaconda-mode, auto-complete, dash, fetchFromGitHub, fetchurl, lib, melpaBuild }: - melpaBuild { - pname = "ac-anaconda"; - version = "20160221.1123"; - src = fetchFromGitHub { - owner = "proofit404"; - repo = "ac-anaconda"; - rev = "94f66b4d4bf0fd9683ee77511833b1eceace0462"; - sha256 = "15xkwnadqjkbgvilyfldj7z5kz2wvw1dk2bcgphx2z9qwjc7wd5f"; - }; - recipeFile = fetchurl { - url = "https://raw.githubusercontent.com/milkypostman/melpa/0eb23a75c8b57b4af1737c0508f03e66430e6076/recipes/ac-anaconda"; - sha256 = "124nvigk6y3iw0lj2r7div88rrx8vz59xwqph1063jsrc29x8rjf"; - name = "ac-anaconda"; - }; - packageRequires = [ anaconda-mode auto-complete dash ]; - meta = { - homepage = "https://melpa.org/#/ac-anaconda"; - license = lib.licenses.free; - }; - }) {}; ac-c-headers = callPackage ({ auto-complete, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "ac-c-headers"; @@ -404,8 +383,8 @@ src = fetchFromGitHub { owner = "emacs-eclim"; repo = "emacs-eclim"; - rev = "4f27d04c30a026f24c0ff18c3a7d36e3fb5b57a5"; - sha256 = "1krrm123vzv6hw54kbkbh1xj6j090rdm4r2fcqp76b3hg8j8cpn1"; + rev = "6396ad1cd25c0a197109343ec1cce5d5080acdff"; + sha256 = "04ci3qb3vgqdvsdfivhwfsxrgalh61b41bsr1cafk4gv3g3rdr13"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/1e9d3075587fbd9ca188535fd945a7dc451c6d7e/recipes/ac-emacs-eclim"; @@ -761,8 +740,8 @@ src = fetchFromGitHub { owner = "xcwen"; repo = "ac-php"; - rev = "cf9db85af2db9150e9d9b4fecad874e16ce43f0d"; - sha256 = "0gm15f5l91sh7syf60lnvlfnf3vivbk36gddsf3yndiwfsqh7xd0"; + rev = "56a18467de4bc1cf408a1910458e1819102312dd"; + sha256 = "0x9ilnqaw9vim9f17rl4g8ikbi4qwagjz41j9f2i72aspir3jdfg"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/ac283f1b65c3ba6278e9d3236e5a19734e42b123/recipes/ac-php"; @@ -778,12 +757,12 @@ ac-php-core = callPackage ({ dash, emacs, f, fetchFromGitHub, fetchurl, lib, melpaBuild, php-mode, popup, s, xcscope }: melpaBuild { pname = "ac-php-core"; - version = "20180206.202"; + version = "20180222.2209"; src = fetchFromGitHub { owner = "xcwen"; repo = "ac-php"; - rev = "cf9db85af2db9150e9d9b4fecad874e16ce43f0d"; - sha256 = "0gm15f5l91sh7syf60lnvlfnf3vivbk36gddsf3yndiwfsqh7xd0"; + rev = "56a18467de4bc1cf408a1910458e1819102312dd"; + sha256 = "0x9ilnqaw9vim9f17rl4g8ikbi4qwagjz41j9f2i72aspir3jdfg"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/ac283f1b65c3ba6278e9d3236e5a19734e42b123/recipes/ac-php-core"; @@ -824,8 +803,8 @@ src = fetchFromGitHub { owner = "Andersbakken"; repo = "rtags"; - rev = "2b0c88cc470b06b65232c23df4b6fbfc4b534580"; - sha256 = "047w0khlcawwr9rz7ss52x9jzam4pdqd1cwgx7nqiyv3cd47xfsy"; + rev = "4f27c1cc60742622e6616b579c82b5440ad446d3"; + sha256 = "08310vkd7gyfc9jcis7r5dfdb6spilxw1kf7p8vm078v8hmmjyj0"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3dea16daf0d72188c8b4043534f0833fe9b04e07/recipes/ac-rtags"; @@ -1030,12 +1009,12 @@ ace-link = callPackage ({ avy, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "ace-link"; - version = "20180101.1328"; + version = "20180224.2244"; src = fetchFromGitHub { owner = "abo-abo"; repo = "ace-link"; - rev = "43d224546a2a557857294a8e3d13c4fe63508e03"; - sha256 = "0cw4br2nx4fa9jsal6b9gavffqjrhq2xgf87szi61dkgi2gacf7y"; + rev = "177e0f9a60ddca62cc44c2395b075cb230b26f4d"; + sha256 = "1rjxpjanyxfrx4dfsag6g647flxvw75vf0jh6y6y0w2jdiih919i"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/68032f40c0ce4170a22db535be4bfa7099f61f85/recipes/ace-link"; @@ -1097,8 +1076,8 @@ src = fetchFromGitHub { owner = "mrkkrp"; repo = "ace-popup-menu"; - rev = "7b8ad628a058d32c420f7615927a34a5d51a7ad3"; - sha256 = "183gc5lidxahfzik9ima2vph2sdi2rd9805kfnghsmwhck275i2r"; + rev = "7b436a0d9e896463d00afbeb7e49a59cc6670e9c"; + sha256 = "0ma5hq0v4kczf7mn1wkqj9pxjy47wryd697gg37l4sszl6ylcs9w"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/53742e2242101c4b3b3901f5c74e24facf62c7d6/recipes/ace-popup-menu"; @@ -1197,12 +1176,12 @@ adafruit-wisdom = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "adafruit-wisdom"; - version = "20180208.2316"; + version = "20180224.1652"; src = fetchFromGitHub { owner = "gonewest818"; repo = "adafruit-wisdom.el"; - rev = "c0fdfcbbbc49927e0c93656f6d4a877cca774224"; - sha256 = "0vjx5aaj9ndpz399czhg5qsfwgibaycvb8j2acfc26mzhpycc2qy"; + rev = "aafc01726f1b3160321d40160298a0e1b054b382"; + sha256 = "18p55zghycsx88dn0iw610fklkhi5chzycrpjb4xzs5x1l5l2v08"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/18483af52c26f719fbfde626db84a67750bf4754/recipes/adafruit-wisdom"; @@ -1344,12 +1323,12 @@ ag = callPackage ({ cl-lib ? null, dash, fetchFromGitHub, fetchurl, lib, melpaBuild, s }: melpaBuild { pname = "ag"; - version = "20180102.1441"; + version = "20180225.240"; src = fetchFromGitHub { owner = "Wilfred"; repo = "ag.el"; - rev = "d00aa65ec2da6944f1ed81da440ad7a9024cfbf0"; - sha256 = "1cjchz7dq42ha6wrn21jqbmf333rg73bz4ppsnd9kz6vqnkgnya0"; + rev = "77b4f50c5372bf219da496567b2b867261f0d354"; + sha256 = "0kwp6bb8fwv76x9r35rz4mvwica1fsappp82rjr1xlhnwwdsc120"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/67f410ac3a58a038e194bcf174bc0a8ceceafb9a/recipes/ag"; @@ -1514,8 +1493,8 @@ src = fetchFromGitHub { owner = "tonini"; repo = "alchemist.el"; - rev = "4beb4c9ceee0534a36f7669aa35fcbdfd6bef7b7"; - sha256 = "0k1k5rb95nyndzhin47r4nzap4fp3dr57gv557wzy3a6jpl88fgz"; + rev = "38ec1faf4a9cbeb2944b517ec30d999022082bc1"; + sha256 = "1hqr1phkm4mxzfszzraqljb32mpin1h1r26al9bazrsq2azmd5a7"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/6616dc61d17c5bd89bc4d226baab24a1f8e49b3e/recipes/alchemist"; @@ -1699,12 +1678,12 @@ all-the-icons-ivy = callPackage ({ all-the-icons, emacs, fetchFromGitHub, fetchurl, ivy, lib, melpaBuild }: melpaBuild { pname = "all-the-icons-ivy"; - version = "20170508.25"; + version = "20180225.630"; src = fetchFromGitHub { owner = "asok"; repo = "all-the-icons-ivy"; - rev = "5357bccddfd30580d5859f3794248efb86a8a054"; - sha256 = "1n6c7vglxkib4irjjafiwdz6cifbb20229n2fpnxkv57hmdarivr"; + rev = "52b3f4a8a4a038998943afaffb5ff25054f65af4"; + sha256 = "1xkrqv6znf1savkg17w41d9rm7wrs8n3c4ad0arrmi522qgp78fr"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/9496e6bb6f03f35444fb204860bc50e5e1b36214/recipes/all-the-icons-ivy"; @@ -1838,8 +1817,8 @@ src = fetchFromGitHub { owner = "proofit404"; repo = "anaconda-mode"; - rev = "8d5ff5e8a6d2e585b0f8f2765099e4e6357470ae"; - sha256 = "0483690q1qg3hlx04ngifmc9d3s47879x3nbz14g2xzc91pcni26"; + rev = "b3f742620c17f9866f3a85ec771f4d0b239f2970"; + sha256 = "1ycfq11x1nshv69d891am50j5zclk62krwyfgia8wk3rxmgnaj53"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/e03b698fd3fe5b80bdd24ce01f7fba28e9da0da8/recipes/anaconda-mode"; @@ -2610,12 +2589,12 @@ apropospriate-theme = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "apropospriate-theme"; - version = "20171010.1420"; + version = "20180223.1526"; src = fetchFromGitHub { owner = "waymondo"; repo = "apropospriate-theme"; - rev = "b4d5a2fedec176d3562943668609766fab0b23ff"; - sha256 = "0y31zx6npv03ygjywy23pvrpvjwi1fh1qhs1qzxsi25pbbk1hkq0"; + rev = "019ed5cf8f1e1abfead7adceeda88938dfe928b7"; + sha256 = "0x6iw9dr3zvy2xqxadlxkjhpkfgig009x0ilipdji20hpa0qhhgm"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/1da33013f15825ab656260ce7453b8127e0286f4/recipes/apropospriate-theme"; @@ -2739,8 +2718,8 @@ src = fetchFromGitLab { owner = "ukaszg"; repo = "aria2"; - rev = "3c54254e424c6c8b4eb0d8e7c4907b094c27a3f0"; - sha256 = "1xkgz3l7idw5bk1xlffdaddf5v1q6fm3grbryl4xvssrbwgnyisf"; + rev = "7a944c5100812269369225af7aa9580fedab175f"; + sha256 = "1pwnx6k7b35xhwqvzd3rl6rf5ydvbrrdmbadns8w0iyz2yafdxji"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/89a55e7c313066ae1bc0db0af5c289814c85fcb1/recipes/aria2"; @@ -2907,8 +2886,8 @@ src = fetchFromGitHub { owner = "jwiegley"; repo = "emacs-async"; - rev = "15bcbf6beae65d7606f0655711159ca56f050c6b"; - sha256 = "14y3jr636hn9p699ypd3kas6750kpz0lk4xchb0y44b94splczqb"; + rev = "7279cc6bdba7bfcb53ca8f5471631ae8dc3918b3"; + sha256 = "1nmi2ykwbswj6qv2s38518nijmlhjd2jvhabybqs8smc152g58sw"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/async"; @@ -2987,12 +2966,12 @@ atom-one-dark-theme = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "atom-one-dark-theme"; - version = "20180201.1853"; + version = "20180215.828"; src = fetchFromGitHub { owner = "jonathanchu"; repo = "atom-one-dark-theme"; - rev = "bf5b76e472d22577fa406c7088a1c2d99fe4b636"; - sha256 = "08hrnv7jyzcnh4iyf5r3b1y4wbynk4fraxhkdgwmxzr666aq7cn7"; + rev = "f67722244554025db1d1ccd2a30e9fa22f8985cd"; + sha256 = "1slk5zbwjr7jv21hxsn61ppijj6p98sqh0k0flnd4512gywdrz2r"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3ba1c4625c9603372746a6c2edb69d65f0ef79f5/recipes/atom-one-dark-theme"; @@ -3026,6 +3005,27 @@ license = lib.licenses.free; }; }) {}; + attrap = callPackage ({ dash, emacs, f, fetchFromGitHub, fetchurl, flycheck, lib, melpaBuild, s }: + melpaBuild { + pname = "attrap"; + version = "20180218.1243"; + src = fetchFromGitHub { + owner = "jyp"; + repo = "attrap"; + rev = "0a733deccaf48350511346b2f5a51d328df4dfc8"; + sha256 = "1ck6m30m76jad7w4mwnpv2gl0kzsjpjvmgjblc5a4gw1wsz3i2iz"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/b7420eca80a8c1776d68b1f121511cc265cc70dc/recipes/attrap"; + sha256 = "1gxnrlsn9xcnnx0nhjxnhrz9bdpk2kpzjhj8jhjmwws9y361fimh"; + name = "attrap"; + }; + packageRequires = [ dash emacs f flycheck s ]; + meta = { + homepage = "https://melpa.org/#/attrap"; + license = lib.licenses.free; + }; + }) {}; auctex-latexmk = callPackage ({ auctex, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "auctex-latexmk"; @@ -3110,15 +3110,36 @@ license = lib.licenses.free; }; }) {}; + aurora-config-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "aurora-config-mode"; + version = "20180216.1502"; + src = fetchFromGitHub { + owner = "bdd"; + repo = "aurora-config-mode.el"; + rev = "8273ec7937a21b469b9dbb6c11714255b890f410"; + sha256 = "1dlhf35hhjgkd9bqbpwrb825g1z6nh14mg31jg2avv55s28j0riy"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/10a44bed8edee646bf68abf7dffbe352a137a278/recipes/aurora-config-mode"; + sha256 = "1hpjwidqmjxanijsc1imc7ww9abbylmkin1p0846fbz1hz3a603c"; + name = "aurora-config-mode"; + }; + packageRequires = []; + meta = { + homepage = "https://melpa.org/#/aurora-config-mode"; + license = lib.licenses.free; + }; + }) {}; auth-password-store = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, password-store, seq }: melpaBuild { pname = "auth-password-store"; - version = "20180129.34"; + version = "20180214.558"; src = fetchFromGitHub { owner = "DamienCassou"; repo = "auth-password-store"; - rev = "0470e6bde546b34677e393c92e2b064db61b6e9b"; - sha256 = "0m309nhiqbyrk2mwymha66xcl05x5vryzz0vj90pak62yil15mnr"; + rev = "6af0458a6b586cc5004fa652f23615433304924d"; + sha256 = "150cx8ida9bl0g84iq051rziy64ic2pxz6hn0blsys1qcp9lf8wa"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/0f4d2a28373ba93da5b280ebf40c5a3fa758ea11/recipes/auth-password-store"; @@ -3551,22 +3572,22 @@ license = lib.licenses.free; }; }) {}; - auto-org-md = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, org }: + auto-org-md = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "auto-org-md"; - version = "20160923.708"; + version = "20180213.1543"; src = fetchFromGitHub { owner = "jamcha-aa"; repo = "auto-org-md"; - rev = "7604c06c1b2f1d01c2e88f114bb0d2d00f21dabb"; - sha256 = "18js1pa60095fs8qjzhjhkx9sjwa2h2iribb27gqv59796qxkfsg"; + rev = "9318338bdb7fe8bd698d88f3af89b2d6413efdd2"; + sha256 = "1dzxc1f4yvj8xww5drcpzmn3fyi8ziimh1cmy6l3i399l1zl0njj"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/39f934f86b5dc04078c204bcbd268af60857e268/recipes/auto-org-md"; sha256 = "1yh9g8407kym6r0b8kr18qshxlrkw47ac17a9lvql0ksshfmnqvk"; name = "auto-org-md"; }; - packageRequires = [ emacs org ]; + packageRequires = [ emacs ]; meta = { homepage = "https://melpa.org/#/auto-org-md"; license = lib.licenses.free; @@ -4041,8 +4062,8 @@ src = fetchFromGitHub { owner = "mrkkrp"; repo = "avy-menu"; - rev = "990cc94d708c923f761be083b3a57f6f844566c8"; - sha256 = "0kjxfg8wx5c8cixazih24s0mv4crk648v9bb6pd1i6lmh266rc6g"; + rev = "b133564cc438870d9b5505c8104611c8998fd0d5"; + sha256 = "19xqs4hyd5wkh0vd3xfbfwhf8fhq5lbzrafx4fbvai24dhjn5rhb"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/2f0b4cfb30c405d44803b36ebcaccef0cf87fe2d/recipes/avy-menu"; @@ -4121,12 +4142,12 @@ aws-snippets = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, yasnippet }: melpaBuild { pname = "aws-snippets"; - version = "20180207.622"; + version = "20180213.835"; src = fetchFromGitHub { owner = "baron42bba"; repo = "aws-snippets"; - rev = "a6e7d102c5b1143f4787a160cbf52c1e8ab48d09"; - sha256 = "08nbcddmi2fq6hf324qhywy29pwixlfd5lnd5qlfirzrvdyz7crv"; + rev = "619c9a401f873042e45547e8cf57f23d0c8947e4"; + sha256 = "19yrdsn76vscqgxmapxn3gv6nrxp7i20p37anylmjss3xkvblxn9"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/485aa401a6a14cd4a916474d9a7df12cdf45d591/recipes/aws-snippets"; @@ -4278,8 +4299,8 @@ src = fetchFromGitHub { owner = "ccann"; repo = "badger-theme"; - rev = "80fb9f8ace37b2e8807da639f7da499a53ffefd4"; - sha256 = "0g8smx6pi2wqv78mhxfgwg51mx5msqsgcc55xcz29aq0q3naw4z1"; + rev = "493d672d5a5478976da7d5ca752008cc7837c57f"; + sha256 = "0mrn3sl1xq19k6v4mw98zqgs11fidnarvidmxayx805k21pana6v"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/298e43769c6cd855526d847e8e3b237912360777/recipes/badger-theme"; @@ -4341,8 +4362,8 @@ src = fetchFromGitHub { owner = "mschuldt"; repo = "bart-mode"; - rev = "3d8573713b6dbaf52402de9c15cb34eb3c89a67b"; - sha256 = "0192fc8fnkmnpwjf1qncvp5h7m8n1hlc697mrsn8ls7pnna01phq"; + rev = "6feeb8f9badbc2ce4b60499bf7bf4acdae4cfed7"; + sha256 = "1i1fcrwcswdqwb59154yzijccv7n0fqvm0ck3d8dqx5vczzmqixh"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/8f9cb09c07cb9fdef15de3e8dbfb6725d97dff6f/recipes/bart-mode"; @@ -4484,12 +4505,12 @@ bazel-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "bazel-mode"; - version = "20171226.1551"; + version = "20180222.2253"; src = fetchFromGitHub { owner = "codesuki"; repo = "bazel-mode"; - rev = "6103da2dd9c9461e35a45fc0544ddf33410baa25"; - sha256 = "0lbiih6lj7qf2h1l2nxcwfkhdzccrs01lcdqsyhp5hysp0zdcr66"; + rev = "b7aa14516feaed40ee4910eafa81db719de0fe56"; + sha256 = "16yjxs62h8dm63nzc04i60bnbyhm2vrpvn98ap8rad6wib2ka3vj"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3945f7eba7d5f248cace11a7946262ac2500b01a/recipes/bazel-mode"; @@ -5445,6 +5466,27 @@ license = lib.licenses.free; }; }) {}; + bmx-mode = callPackage ({ cl-lib ? null, company, dash, fetchFromGitHub, fetchurl, lib, melpaBuild, s }: + melpaBuild { + pname = "bmx-mode"; + version = "20180226.256"; + src = fetchFromGitHub { + owner = "josteink"; + repo = "bmx-mode"; + rev = "2093e7041006aa8c142c151bb597af061419aa43"; + sha256 = "12h8h44ni8g6nzh9i2h9w4lmvkca3fxp8cybikln7x4hcnplkfj5"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/7f456d2b2b8f5a33bcb0f2ffd19e6e0276950f24/recipes/bmx-mode"; + sha256 = "04g8l4cw20k3yhbija9mz1l4nx3bzhzj7nb35s0xdyvwbc2mhrwb"; + name = "bmx-mode"; + }; + packageRequires = [ cl-lib company dash s ]; + meta = { + homepage = "https://melpa.org/#/bmx-mode"; + license = lib.licenses.free; + }; + }) {}; bnfc = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "bnfc"; @@ -5595,12 +5637,12 @@ borg = callPackage ({ dash, emacs, epkg, fetchFromGitHub, fetchurl, lib, magit, melpaBuild }: melpaBuild { pname = "borg"; - version = "20180125.849"; + version = "20180220.505"; src = fetchFromGitHub { owner = "emacscollective"; repo = "borg"; - rev = "593314b8f1f4542155eb4dae0ff1be375895b83d"; - sha256 = "095l5cakz0clmna7njqdng3k1gpy4q6h1bld0pvichkkbqh8is6c"; + rev = "28abb4b602d060bba38e6f38623b2d3f309e1ede"; + sha256 = "15iim40gzirw75h6b3alhb95x7pmzmanx6pbdrfmyw7yv4bjsdbx"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/878ab90d444f3a1fd2c9f9068ca7b477e218f1da/recipes/borg"; @@ -5700,12 +5742,12 @@ bpr = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "bpr"; - version = "20170930.642"; + version = "20180220.1044"; src = fetchFromGitHub { owner = "ilya-babanov"; repo = "emacs-bpr"; - rev = "314b0d6f69ff5a9c2d25a1ce5a2109d67d4d9bb3"; - sha256 = "02qj8gnhxv39y8kvlw491cbiaknll3hg03pk4xx15rffl7dyrbds"; + rev = "af84a83dea09d86e77d87ac30604f2c5b4bf4117"; + sha256 = "1r2prq9j6fmzzkl1f3r9drn6lna2wzd9qv127x7z5g6n8pgb6ipx"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/05eed39bae37cc8359d2cc678052cbbcc946e379/recipes/bpr"; @@ -5991,22 +6033,22 @@ license = lib.licenses.free; }; }) {}; - buffer-flip = callPackage ({ fetchFromGitHub, fetchurl, key-chord, lib, melpaBuild }: + buffer-flip = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "buffer-flip"; - version = "20160811.713"; + version = "20180223.2341"; src = fetchFromGitHub { owner = "killdash9"; repo = "buffer-flip.el"; - rev = "386067141ca77848b266e068f8c6baf6b4c2ab5b"; - sha256 = "1bch4jk6d60aydvcc624026pwfby29fbcwm3zhrsksqc0d2qxdwq"; + rev = "443f74c1186ee91dab42812e864e7ad095f45b9a"; + sha256 = "18ii9gd7hbfcibj7fpx9b9bz3cbpdhvy4z143hmlh3ywj2mjdfii"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3924870cac1392a7eaeeda34b92614c26c674d63/recipes/buffer-flip"; sha256 = "0ka9ynj528yp1p31hbhm89627v6dpwspybly806n92vxavxrn098"; name = "buffer-flip"; }; - packageRequires = [ key-chord ]; + packageRequires = []; meta = { homepage = "https://melpa.org/#/buffer-flip"; license = lib.licenses.free; @@ -6350,12 +6392,12 @@ buttercup = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "buttercup"; - version = "20180128.228"; + version = "20180223.937"; src = fetchFromGitHub { owner = "jorgenschaefer"; repo = "emacs-buttercup"; - rev = "6848057a224e2548a58ec81ce042c81a44dd481c"; - sha256 = "0qzfj57lwxqff3d9kpdg290ishy8h3il43y114kqs1gxcgyxzsv2"; + rev = "8d27bb99463bc230a76dee96378dd337622988f5"; + sha256 = "0s5vfzcfsiqb6bc6jh95a2dyy23b4bvhdpzn2fcq8awldbpx51fh"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/d4b187cb5b3cc5b546bfa6b94b6792e6363242d1/recipes/buttercup"; @@ -6581,12 +6623,12 @@ cakecrumbs = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "cakecrumbs"; - version = "20180127.456"; + version = "20180222.1845"; src = fetchFromGitHub { owner = "kuanyui"; repo = "cakecrumbs.el"; - rev = "b7bfcc46aed139abc1d30f700076f82584084f3f"; - sha256 = "1jl196qfgmn87kzkzhrqliarp9cmvl9c4ka2v20knw6ca2ymzbp9"; + rev = "76cfbfacfaa9d2128fc9218338a0ba2bb47349ab"; + sha256 = "18ni6krymzm1af2vmw2n82s0ifny6pn1p0qifn3646xx4p210a4z"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/c970907affeb4a21fa1b7c350edf171dbdcd8de5/recipes/cakecrumbs"; @@ -6767,6 +6809,27 @@ license = lib.licenses.free; }; }) {}; + call-graph = callPackage ({ emacs, fetchFromGitHub, fetchurl, hierarchy, ivy, lib, melpaBuild, tree-mode }: + melpaBuild { + pname = "call-graph"; + version = "20180226.156"; + src = fetchFromGitHub { + owner = "beacoder"; + repo = "call-graph"; + rev = "bdbd5130476b8ad5606e694f4310678a90bab9c2"; + sha256 = "1a7fcpdnmjmc151d4vma9wng1m9mw102sw8qx02h61gqsg6ia8bc"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/a6acf099e2510c82b4b03e2f35051afc3d28af45/recipes/call-graph"; + sha256 = "0cklr79gqqrb94jq8aq65wqriamay78vv9sd3jrvp86ixl3ig5xc"; + name = "call-graph"; + }; + packageRequires = [ emacs hierarchy ivy tree-mode ]; + meta = { + homepage = "https://melpa.org/#/call-graph"; + license = lib.licenses.free; + }; + }) {}; calmer-forest-theme = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "calmer-forest-theme"; @@ -6816,8 +6879,8 @@ src = fetchFromGitHub { owner = "ocaml"; repo = "ocaml"; - rev = "932f5db4425fdf7bae491d98e8cd702ab58e9667"; - sha256 = "1m1xm7vagjvc2zlh8iddvjfzlgxm4fgl76afzlpvjhxmwb8zkw5v"; + rev = "70eb179b20d401b2fad43d3ddfd2752fc7925ab1"; + sha256 = "1l0qfkm9jz4yx5rpwr8bxcjpn1z1mm4zi0na6b21zbsspbmpv912"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/d5a3263cdcc229b11a3e96edbf632d56f32c47aa/recipes/caml"; @@ -7319,8 +7382,8 @@ src = fetchFromGitHub { owner = "cfengine"; repo = "core"; - rev = "cc2c7d130d7ae5f1402c5edcad53237d9d63fe87"; - sha256 = "18s6bcddwc8h34bn59xq4hkrn1gyhrqrkwc8y2bz4zsffmjd99z7"; + rev = "8a24c2cb8a59bc4eba0a9271e86d078c80a3864c"; + sha256 = "17my98032fx95kbi0hklwnk52c5n8w9npynd24255637fan46x30"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/c737839aeda583e61257ad40157e24df7f918b0f/recipes/cfengine-code-style"; @@ -7441,12 +7504,12 @@ challenger-deep-theme = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "challenger-deep-theme"; - version = "20171229.435"; + version = "20180223.644"; src = fetchFromGitHub { owner = "MaxSt"; repo = "challenger-deep"; - rev = "e0462b42218c94288f5c8a62f2b217bb8037995a"; - sha256 = "1v64yx8pr3aqds3grh79y27qg8x5ad3hwxv96pw0hlhvqc62s4ai"; + rev = "8194c3ade7ba73f6ddfea7dec55f77b5b6fdbcab"; + sha256 = "0rsx9gqkxxkk597liyghw0sjrvmfid4j1kbmz5ff8irm259g7psy"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/7942f539d025c1e2b059d49e1984716cbbc90a67/recipes/challenger-deep-theme"; @@ -7508,8 +7571,8 @@ src = fetchFromGitHub { owner = "mrkkrp"; repo = "char-menu"; - rev = "3235f8e3c88848ce10d25f84a5da39061fd35c0d"; - sha256 = "05pjfj6g4gdbdj4z63283j5qzkvhvrzsx1jhbc5iih0nsffwapc3"; + rev = "82f0422179737bcb9f93481aebaf1071d54fc859"; + sha256 = "1r5nymx7yj4l4wjhsx6gxvh9rqx322x5n54cqg71mssxiwccpdv3"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/f6676747e853045b3b19e7fc9524c793c6a08303/recipes/char-menu"; @@ -7903,12 +7966,12 @@ cider = callPackage ({ clojure-mode, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, pkg-info, queue, seq, spinner }: melpaBuild { pname = "cider"; - version = "20180211.538"; + version = "20180219.1846"; src = fetchFromGitHub { owner = "clojure-emacs"; repo = "cider"; - rev = "36f1934dc8ff9557e3abef9a93ac468ac453404c"; - sha256 = "0n3xk50jkj2k04j80p1wlxicagh1mrhgsxs4lfgdqsj4ypb9s1ay"; + rev = "88f4fcf1d39a13ff336657b2cc4161ebb9d955d6"; + sha256 = "13yl09chl8j5n3mlwb25ipxgi4a3cfs8822lahkisjv42n62f234"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/55a937aed818dbe41530037da315f705205f189b/recipes/cider"; @@ -7984,27 +8047,6 @@ license = lib.licenses.free; }; }) {}; - cider-profile = callPackage ({ cider, fetchFromGitHub, fetchurl, lib, melpaBuild }: - melpaBuild { - pname = "cider-profile"; - version = "20141120.625"; - src = fetchFromGitHub { - owner = "thunknyc"; - repo = "nrepl-profile"; - rev = "9aa7e404f53f5136ac8d15301ce8ca2924785cb3"; - sha256 = "0lgq4p7rs4prqfqd83v1l36xxacrd65jsfzbp7q62b2pjqikpgk0"; - }; - recipeFile = fetchurl { - url = "https://raw.githubusercontent.com/milkypostman/melpa/440708bbf501e7b3d0aff1b9432ac71b5f9f8eab/recipes/cider-profile"; - sha256 = "14jc98h4r9rb7pxfb60ps4ss8p0bm66wdl6n8z1357hk93h9kmfs"; - name = "cider-profile"; - }; - packageRequires = [ cider ]; - meta = { - homepage = "https://melpa.org/#/cider-profile"; - license = lib.licenses.free; - }; - }) {}; cider-spy = callPackage ({ cider, cl-lib ? null, dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, noflet }: melpaBuild { pname = "cider-spy"; @@ -8113,12 +8155,12 @@ circe = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "circe"; - version = "20180105.1158"; + version = "20180223.929"; src = fetchFromGitHub { owner = "jorgenschaefer"; repo = "circe"; - rev = "58fc1a3c7f9f6e3126585b1ab2f3d00f824b7d7c"; - sha256 = "1vsh2x794zaf02zql4s6bn3v0m3xm43icvrn7jfmi660qh3f4bsy"; + rev = "f7f7cb62a992120bf80c3a078bec1c029f8ff0cd"; + sha256 = "122wvsxvv3yzkdjfi8s5gbl371bzi5kw377a7f3cpp7hxz4i24bl"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/a2b295656d53fddc76cacc86b239e5648e49e3a4/recipes/circe"; @@ -8201,8 +8243,8 @@ src = fetchFromGitHub { owner = "emacsorphanage"; repo = "clang-format"; - rev = "dee259662042ea4f7f339fd95970bb504e440cca"; - sha256 = "1a02yz62xlaz1acqpvrlmwv5syflyfrdpwlmi26ih3kd2hl6p5sl"; + rev = "e2facf890156ad57a122ed5e79e5a40cc03c8cae"; + sha256 = "09pq0zf5im6kkjwyzdz3np3b4dd5va3as1syygvjnl5dlh6gkjcs"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/30de78c9cf83de30093a5647976eeaf552d4b2cb/recipes/clang-format"; @@ -8843,8 +8885,8 @@ src = fetchFromGitHub { owner = "Kitware"; repo = "CMake"; - rev = "0465d3c204e8cc7c677dd6a34d3ea884bc5e7954"; - sha256 = "08xv33w6ai51zfsqh73cfcyc6b2dalqqpgavqh4gxp7g34zncg5h"; + rev = "25613b9fa46e6433f987e9e9f47533db3a0939f3"; + sha256 = "1pnyx2niscm7bs2n48xxlxdfavxvb40vl0sm0j5m8vp9ybl11g4m"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/598723893ae4bc2e60f527a072efe6ed9d4e2488/recipes/cmake-mode"; @@ -8941,6 +8983,27 @@ license = lib.licenses.free; }; }) {}; + cobalt = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "cobalt"; + version = "20180222.1938"; + src = fetchFromGitHub { + owner = "cobalt-org"; + repo = "cobalt.el"; + rev = "b542c4172ef41bb1d50e1b1dc712acf50c2392d5"; + sha256 = "1614m2m19wa6awvaz8akakbm2kbvj55s2lh7k3lgysaw007wbi1d"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/b2435d98e7564d333c8224b67ac6ad9c95debda1/recipes/cobalt"; + sha256 = "0r3fx1xx24x4qapbj2p8krc67rjmrjm88y89baf1x2swk7xdza92"; + name = "cobalt"; + }; + packageRequires = [ emacs ]; + meta = { + homepage = "https://melpa.org/#/cobalt"; + license = lib.licenses.free; + }; + }) {}; cobra-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "cobra-mode"; @@ -9595,12 +9658,12 @@ company = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "company"; - version = "20180211.1604"; + version = "20180225.1741"; src = fetchFromGitHub { owner = "company-mode"; repo = "company-mode"; - rev = "38ef92d6273113c2b3d2a302129ad37a30f98998"; - sha256 = "0l9hhflmirv1a0znjsg6ysvrsg270pwnkmhakihhqy39fgv3qdfa"; + rev = "a64d52ca033208cda34f2fb7d0a2f951cce8bd29"; + sha256 = "1n44f9kbmp95nbsyp4g60d6pi044vxy2ccai9lgkjm3wlg7xdzrd"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/96e7b4184497d0d0db532947f2801398b72432e4/recipes/company"; @@ -9812,12 +9875,12 @@ company-coq = callPackage ({ cl-lib ? null, company, company-math, dash, fetchFromGitHub, fetchurl, lib, melpaBuild, yasnippet }: melpaBuild { pname = "company-coq"; - version = "20171202.1243"; + version = "20180219.751"; src = fetchFromGitHub { owner = "cpitclaudel"; repo = "company-coq"; - rev = "dcad9c07ecbd90d261520ac09251eaa3480ea98a"; - sha256 = "132dw17d8k8sk3g0vbs0qqb359rw33ck4pqx3w2p8kb2zmzam597"; + rev = "e2bbd06af9661628198d12e7b4725a17ef260dd9"; + sha256 = "01qyy4037isa5ghy7gwl77byydn3s5mc6pvd7w79910cg5h60dkg"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/7f89e3097c654774981953ef125679fec0b5b7c9/recipes/company-coq"; @@ -9861,12 +9924,12 @@ company-dict = callPackage ({ company, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, parent-mode }: melpaBuild { pname = "company-dict"; - version = "20160528.53"; + version = "20180216.156"; src = fetchFromGitHub { owner = "hlissner"; repo = "emacs-company-dict"; - rev = "0589c2c3980a8f0df1705e3c0e5e075557eaac75"; - sha256 = "1bfl7b1lj4rgifqcpz4p8nhamxyyh29lbgl1g35rizw4nzv9sizq"; + rev = "7ab6331d8095e9b93c726da754102fd708c0002e"; + sha256 = "18lfqankivzdijsklyi49a1v6nqixbmk4d1m6syqd63qj849aixa"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/212c077def5b4933c6001056132181e1a5850a7c/recipes/company-dict"; @@ -9928,8 +9991,8 @@ src = fetchFromGitHub { owner = "emacs-eclim"; repo = "emacs-eclim"; - rev = "4f27d04c30a026f24c0ff18c3a7d36e3fb5b57a5"; - sha256 = "1krrm123vzv6hw54kbkbh1xj6j090rdm4r2fcqp76b3hg8j8cpn1"; + rev = "6396ad1cd25c0a197109343ec1cce5d5080acdff"; + sha256 = "04ci3qb3vgqdvsdfivhwfsxrgalh61b41bsr1cafk4gv3g3rdr13"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/1e9d3075587fbd9ca188535fd945a7dc451c6d7e/recipes/company-emacs-eclim"; @@ -9987,12 +10050,12 @@ company-flow = callPackage ({ company, dash, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "company-flow"; - version = "20170325.810"; + version = "20180225.1359"; src = fetchFromGitHub { owner = "aaronjensen"; repo = "company-flow"; - rev = "339f502e46e7d9214b61498d539b17f8f0322d17"; - sha256 = "0w2b3fk0q3ia5fjxk8gxj4161rxg43jw0hxpihidl5aak4i6dxb9"; + rev = "76ef585c70d2a3206c2eadf24ba61e59124c3a16"; + sha256 = "0zs9cblnbkxa0dxw4lyllmybqizxcdx96gv8jlhx20nrjpi78piw"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/63d346c14af1c5c138d14591a4d6dbc44d9bc429/recipes/company-flow"; @@ -10218,12 +10281,12 @@ company-lsp = callPackage ({ company, dash, emacs, fetchFromGitHub, fetchurl, lib, lsp-mode, melpaBuild, s }: melpaBuild { pname = "company-lsp"; - version = "20180211.2052"; + version = "20180216.2325"; src = fetchFromGitHub { owner = "tigersoldier"; repo = "company-lsp"; - rev = "b58c8c4cbfb0e01ee9020f09dfd25cfadda58cc1"; - sha256 = "1fs92qd0ni7bwbbccyjycrklcdb1nwms6yabfwr37aizkbrg28lw"; + rev = "4512d062c38922d8b8cf402ca6043c246e915694"; + sha256 = "0q95lgw02qy5dn3vpdhspmvjhnfzmmn2asajaf15q5lkjbsvxfrk"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/5125f53307c1af3d9ccf2bae3c25e7d23dfe1932/recipes/company-lsp"; @@ -10348,8 +10411,8 @@ src = fetchFromGitHub { owner = "xcwen"; repo = "ac-php"; - rev = "cf9db85af2db9150e9d9b4fecad874e16ce43f0d"; - sha256 = "0gm15f5l91sh7syf60lnvlfnf3vivbk36gddsf3yndiwfsqh7xd0"; + rev = "56a18467de4bc1cf408a1910458e1819102312dd"; + sha256 = "0x9ilnqaw9vim9f17rl4g8ikbi4qwagjz41j9f2i72aspir3jdfg"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/ac283f1b65c3ba6278e9d3236e5a19734e42b123/recipes/company-php"; @@ -10501,8 +10564,8 @@ src = fetchFromGitHub { owner = "Andersbakken"; repo = "rtags"; - rev = "2b0c88cc470b06b65232c23df4b6fbfc4b534580"; - sha256 = "047w0khlcawwr9rz7ss52x9jzam4pdqd1cwgx7nqiyv3cd47xfsy"; + rev = "4f27c1cc60742622e6616b579c82b5440ad446d3"; + sha256 = "08310vkd7gyfc9jcis7r5dfdb6spilxw1kf7p8vm078v8hmmjyj0"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3dea16daf0d72188c8b4043534f0833fe9b04e07/recipes/company-rtags"; @@ -10539,12 +10602,12 @@ company-solidity = callPackage ({ cl-lib ? null, company, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "company-solidity"; - version = "20180206.821"; + version = "20180221.1330"; src = fetchFromGitHub { owner = "ssmolkin1"; repo = "company-solidity"; - rev = "0687c09671403888b88e27d58e70f1bc969d1425"; - sha256 = "1clxzxyvnnf6mvadlqslbn7is7g2b625mnb4c5k7iyflc081wpz2"; + rev = "9a57a4ff4cad1d423429c78457cd05c38826801c"; + sha256 = "1v9h85vb6lqjlb5w9g2i042zb3w3y916in7h8jph2b74187a9nl6"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/ef246601ff6d92d6dfcd809f637e50d9838da0b8/recipes/company-solidity"; @@ -10711,8 +10774,8 @@ src = fetchFromGitHub { owner = "abingham"; repo = "emacs-ycmd"; - rev = "e21c99de8fd2992031adaa758df0d495e55d682a"; - sha256 = "1l9xsqlcqi25mdka806gz3h4y4x0dh00n6bajh3x908ayixjgf91"; + rev = "a35a2ddd911da6d3a926bdef2614a2898055a5e2"; + sha256 = "1nig77gqi74k01309r3nfy45ylhi5mj7ajxlhib6i58zlib8ycbl"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/company-ycmd"; @@ -11022,12 +11085,12 @@ copy-file-on-save = callPackage ({ cl-lib ? null, emacs, f, fetchFromGitHub, fetchurl, lib, melpaBuild, s }: melpaBuild { pname = "copy-file-on-save"; - version = "20171211.1744"; + version = "20180217.914"; src = fetchFromGitHub { owner = "emacs-php"; repo = "emacs-auto-deployment"; - rev = "11c2004947e0200e88991e265a5ae971adfbd7b2"; - sha256 = "1snlh828zq6b3znrdg4mfl4an76qbqhmld23pwl89ncp37f2lbhv"; + rev = "1ad10401711a3bf0a0894eeed357b402238be113"; + sha256 = "1ydpsh5j9j168crn30lpzv73rw2z80prp0hn2rybgrhvqfs3rbx6"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/eb13cb0dba1696cc51132cd1ff723fa17f892a7c/recipes/copy-file-on-save"; @@ -11148,12 +11211,12 @@ counsel = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, swiper }: melpaBuild { pname = "counsel"; - version = "20180211.1029"; + version = "20180225.744"; src = fetchFromGitHub { owner = "abo-abo"; repo = "swiper"; - rev = "cc5197d5de78ba981df54815c8615d795e0ffdc5"; - sha256 = "0c8866mb2ca419b6zh153vp298dxwldj29lbrynwr1jlpjf1dbr5"; + rev = "e4b05e7af0ea80c91ddca6be5eae447a0ba3b8b5"; + sha256 = "00vdb4mwgy6cza3ybjza2xk3rzk4y14d83cnvw58wvnj190gphm3"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/06c50f32b8d603db0d70e77907e36862cd66b811/recipes/counsel"; @@ -11211,12 +11274,12 @@ counsel-etags = callPackage ({ counsel, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "counsel-etags"; - version = "20180129.219"; + version = "20180222.2023"; src = fetchFromGitHub { owner = "redguardtoo"; repo = "counsel-etags"; - rev = "2219bf8d9a4584abc905c7470455777553496056"; - sha256 = "0kcxcbf1rm7cm74s5z87pv0bflx42h4j2lnb8b3r0nznj94ywnj3"; + rev = "9d70490b551503aac22241c8089a46e55dd3deba"; + sha256 = "03yr0y3z0jgh8c1db43nq0888rr561f6ks5fmf254aibh63schff"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/87528349a3ab305bfe98f30c5404913272817a38/recipes/counsel-etags"; @@ -11295,12 +11358,12 @@ counsel-projectile = callPackage ({ counsel, fetchFromGitHub, fetchurl, lib, melpaBuild, projectile }: melpaBuild { pname = "counsel-projectile"; - version = "20180204.1147"; + version = "20180217.2349"; src = fetchFromGitHub { owner = "ericdanan"; repo = "counsel-projectile"; - rev = "1c1e7eff065e1660981428ef326185c404488705"; - sha256 = "18b66rv73y6gx0hhjjfixywj0ig41rxb4k4ngpxap56cy7b8kfj9"; + rev = "bf98fbd1988885e82129823bf189b777dd52a084"; + sha256 = "0z940554lqsyrj1wljmgl4najrxpv4d6kqf5n60a6sj630ak0blc"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/389f16f886a385b02f466540f042a16eea8ba792/recipes/counsel-projectile"; @@ -11547,12 +11610,12 @@ cquery = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, lsp-mode, melpaBuild }: melpaBuild { pname = "cquery"; - version = "20180204.912"; + version = "20180226.428"; src = fetchFromGitHub { owner = "cquery-project"; repo = "emacs-cquery"; - rev = "e3ce2127f9937eb0a7b7a22e81f205ff150f4ecd"; - sha256 = "1p3idygppqi5xgbjq9pr5pqpm4isw1cb8qq8szf5mb6ypq2dlszm"; + rev = "0b70a10869581a682ade3730442881250304a331"; + sha256 = "01jf77m3d8ydrnjms62c6zn2xwfcs3wadk7wcc73qrsqz99i81ba"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3cd3bffff0d2564c39735f844f9a02a660272caa/recipes/cquery"; @@ -12055,8 +12118,8 @@ src = fetchFromGitHub { owner = "mortberg"; repo = "cubicaltt"; - rev = "84053d1c023721706ac5cbecf152e2cc71080518"; - sha256 = "1v5ya14ayj719x98swbrv7spsa5rzcxzzh1k18fpal7mqmzvy6jz"; + rev = "7f3c7a7cfe60f98da46e6958bec62bac4675ccd2"; + sha256 = "096523m3spfqw72zp2rzcf1b54997yzs7qxwvr3awhicah1z6mv0"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/1be42b49c206fc4f0df6fb50fed80b3d9b76710b/recipes/cubicaltt"; @@ -12265,8 +12328,8 @@ src = fetchFromGitHub { owner = "mrkkrp"; repo = "cyphejor"; - rev = "d2faf26420ac16c4056f6eda067b845d33e102cd"; - sha256 = "0vg0n8xcqiv28i3xmnxzji77dbnyxrld4ncdzpa3hpc1j92s9a09"; + rev = "df449180d28691c9bdbef7bcb25aee75b2af50ca"; + sha256 = "1bni88xdm69m4pq79wq2wb3n50c955amimvlbc63xs1ik3ih52q0"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/ad7cacfa39d8f85e26372ef21898663aebb68e43/recipes/cyphejor"; @@ -12303,12 +12366,12 @@ cython-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "cython-mode"; - version = "20170907.1648"; + version = "20180213.854"; src = fetchFromGitHub { owner = "cython"; repo = "cython"; - rev = "829d7bbef5173771bcf9ffdf2e7e30e96f98e99e"; - sha256 = "10671yczbixg90x5c8rgd838w5la21x9jqdm03vcrz03i2ccjs99"; + rev = "cf70c10744aec43df0708f5ee3d692d378fc31f1"; + sha256 = "03ka1lnw4qdg5lzlimdg8w1gynmbf66wvr7iplgszf752cg1q01i"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/be9bfabe3f79153cb859efc7c3051db244a63879/recipes/cython-mode"; @@ -12345,12 +12408,12 @@ d-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "d-mode"; - version = "20161022.717"; + version = "20180215.727"; src = fetchFromGitHub { owner = "Emacs-D-Mode-Maintainers"; repo = "Emacs-D-Mode"; - rev = "a97c92ced57224287a84e7fc48ba9aac6b2afc08"; - sha256 = "0ln38lkl8qcnpcpjqck3i6hd5zjv43g7vka3kapz2bnz4s33jn3p"; + rev = "398f1854d53863185e60873b494eec0263bdd0dd"; + sha256 = "0xka4k0j0rl4kjjyzryx7a7ngf9qzry148nhpzc66yirlrp5hjn8"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3c13e9ccc358743de660b1f0e89d6bb709c42bff/recipes/d-mode"; @@ -12450,12 +12513,12 @@ danneskjold-theme = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "danneskjold-theme"; - version = "20180129.634"; + version = "20180221.541"; src = fetchFromGitHub { owner = "rails-to-cosmos"; repo = "danneskjold-theme"; - rev = "13e5ea8758465e7d23081fbb524603394b09a689"; - sha256 = "1zhn2bblafmxc83rg33ipy8pd0i7qrn9630cy74bigl3x5zxs3xd"; + rev = "7b32dcdad3933e0eab03d2702014c0b56fc73b9a"; + sha256 = "1sxqnf8c48p8jnrxabjikijah8d7v11c4k4mvmc67vvn92p20ag5"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/557244a3b60c7cd3ca964ff843aa1e9d5a1e32ec/recipes/danneskjold-theme"; @@ -12471,12 +12534,12 @@ dante = callPackage ({ dash, emacs, f, fetchFromGitHub, fetchurl, flycheck, haskell-mode, lcr, lib, melpaBuild, s }: melpaBuild { pname = "dante"; - version = "20180202.48"; + version = "20180224.1246"; src = fetchFromGitHub { owner = "jyp"; repo = "dante"; - rev = "c1c9bde9a83a87c46731466af56cd31262d057fa"; - sha256 = "01krdh3cz2ddhlhpyc072izm4y29qbpjkmwj0fq4vi5hcqzbalsk"; + rev = "33c8c4afac616e6de30111f8a7f11d572496a838"; + sha256 = "0zv6vqzw299ydgwxiky8b2nlb8cyzzw9zsx44ixaqqf73f63bv1n"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/5afa8226077cbda4b76f52734cf8e0b745ab88e8/recipes/dante"; @@ -12681,12 +12744,12 @@ dart-mode = callPackage ({ cl-lib ? null, dash, emacs, fetchFromGitHub, fetchurl, flycheck, lib, melpaBuild, s }: melpaBuild { pname = "dart-mode"; - version = "20171024.2137"; + version = "20180219.1614"; src = fetchFromGitHub { owner = "nex3"; repo = "dart-mode"; - rev = "adef2a5b672d503ae3e92b30bb80095879b030d0"; - sha256 = "0bb790rpijlv4cjdcwgqzb249rnz6br557lnn74rb9g52wpabl69"; + rev = "4feac341db7d2b80841fedcf1798dee9070d68bf"; + sha256 = "031f9lkxyhirasj7m0rj67gk8rh3ry640qcppw2p88k937kc6765"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/dart-mode"; @@ -13042,8 +13105,8 @@ src = fetchFromGitHub { owner = "preetpalS"; repo = "decl.el"; - rev = "c097d532de13cb69b0fc390afa6d806d0db97588"; - sha256 = "1zfn4rkv9n96li0pbxn6c22ljwhg7gyih1srymrk482r2zfhkja6"; + rev = "ff7f8a4f1225cbdf141c86172104e67a4cf58c86"; + sha256 = "1ns1ni6aalr541df3a0ylqy0gj68fcsxdfvm4m1ga5532kxnswnj"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/8c2ecd46180643a0c493e05ec86fe50bc1e55146/recipes/decl"; @@ -13646,12 +13709,12 @@ dimmer = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "dimmer"; - version = "20180210.1348"; + version = "20180217.2011"; src = fetchFromGitHub { owner = "gonewest818"; repo = "dimmer.el"; - rev = "263d330d8f9e99c9c3d3235fe6cf90ecaca90e7c"; - sha256 = "1dg5pf54w9479br40i0b66y86xdn1xj99iq7rmagzva908q5rpyy"; + rev = "d033fdda154e688e45cca35902dbff9915351b98"; + sha256 = "1d457029zyabfjhzrgayibdmxfmia5yr7rqn50kc16k3aavw32f7"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/8ae80e9202d69ed3214325dd15c4b2f114263954/recipes/dimmer"; @@ -14129,12 +14192,12 @@ dired-sidebar = callPackage ({ dired-subtree, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "dired-sidebar"; - version = "20180126.1812"; + version = "20180218.1717"; src = fetchFromGitHub { owner = "jojojames"; repo = "dired-sidebar"; - rev = "6b2d1df460d4b0dd1448b092d3753314cba784c5"; - sha256 = "1i5ia9m7r63gr91ll9xmqq48y9823hg0mqq69rnzfvbw0zjbgkrq"; + rev = "e43864a70ee240bf8dcaddd7bb88b77c6e1e9fe6"; + sha256 = "1s70qlm1jxq7larwq5gr2zc58q4qxch5f2qk6fzqwkpcvsvlv304"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/30e15c8361b01195f198197e704828fbcac0e8d6/recipes/dired-sidebar"; @@ -14276,12 +14339,12 @@ direnv = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, with-editor }: melpaBuild { pname = "direnv"; - version = "20171221.138"; + version = "20180213.1238"; src = fetchFromGitHub { owner = "wbolster"; repo = "emacs-direnv"; - rev = "b1c14f307652e5a039165d196a799638feb16cd8"; - sha256 = "0vxa29z08idy74y0140c2ddxysj98d644zih9vvddjjmggj7czna"; + rev = "5b55dac12467689083ff995777f54a304ff47be1"; + sha256 = "0sjrnab8rx1bpnxim268b8jfpyh8h0iy3j38925r0jqjgjb19ksn"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/5419809ee62b920463e359c8e1314cd0763657c1/recipes/direnv"; @@ -14968,12 +15031,12 @@ docker = callPackage ({ dash, docker-tramp, emacs, fetchFromGitHub, fetchurl, json-mode, lib, magit-popup, melpaBuild, s, tablist }: melpaBuild { pname = "docker"; - version = "20180107.925"; + version = "20180222.717"; src = fetchFromGitHub { owner = "Silex"; repo = "docker.el"; - rev = "5a6e407ee9c6035245749ee1f249aed16d651728"; - sha256 = "0gl2rbx649yc4rbljmhdqsa17hnv24lpj5y8fxdh27gnjqksg2zq"; + rev = "ec2b07255e273639ff76303778661f81c5b74000"; + sha256 = "0nlf3rw9xa9hggqkw6nxfswbqlnsgbliz9z652kp7c9hfikfmcsj"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/6c74bf8a41c17bc733636f9e7c05f3858d17936b/recipes/docker"; @@ -15165,12 +15228,12 @@ doom-themes = callPackage ({ all-the-icons, cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "doom-themes"; - version = "20180205.1204"; + version = "20180219.1227"; src = fetchFromGitHub { owner = "hlissner"; repo = "emacs-doom-themes"; - rev = "d84a0172202243f4fe0ae5738d7ea9b1eb2d38c6"; - sha256 = "0za6cq7wr7zpqjq5g6ac7zqnzq544s0zkkhsc0djcwc2x67vr95g"; + rev = "aa57d222b65a4dc9dddd76f66adbe6ac003f57a6"; + sha256 = "05chhg1mpnp3jqjgwwsnzkh19ci4429sgq9xpx4jxfbbalhd4z11"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/c5084bc2c3fe378af6ff39d65e40649c6359b7b5/recipes/doom-themes"; @@ -15585,12 +15648,12 @@ dtrt-indent = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "dtrt-indent"; - version = "20180211.946"; + version = "20180218.1123"; src = fetchFromGitHub { owner = "jscheid"; repo = "dtrt-indent"; - rev = "34f2e23de514deeb61888557e66ccc9790ff8eed"; - sha256 = "09fjr4m5cxgfdxpnrlc7hdvckz0l0lrx1vyglb7kwyyacyp1vdly"; + rev = "3ea5136bde1240f93fbf3ce30fffc4f279a58d27"; + sha256 = "0lkc8y09lhlpg7vrn2459c5fxn0nvxbzqhwadmkgc046i3aapqpg"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/61bcbcfa6c0f38a1d87f5b6913b8be6c50ef2994/recipes/dtrt-indent"; @@ -15669,12 +15732,12 @@ dumb-jump = callPackage ({ dash, emacs, f, fetchFromGitHub, fetchurl, lib, melpaBuild, popup, s }: melpaBuild { pname = "dumb-jump"; - version = "20180123.1100"; + version = "20180225.1541"; src = fetchFromGitHub { owner = "jacktasia"; repo = "dumb-jump"; - rev = "3bd7c23c3e4ac0936679ad6ebb68f14e37c7bc5d"; - sha256 = "0vnbp8q059z9bfhf1bq1n6cvc4ia3rkdk0iambgwd48i959mdsvs"; + rev = "65b9a3aea2bb212cc83d2f9414d0897331278000"; + sha256 = "14g99l038f29wh66ybfi99nvk1niqkk613j0rz7hkw9l0y912m2k"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/dumb-jump"; @@ -16050,8 +16113,8 @@ src = fetchFromGitHub { owner = "redguardtoo"; repo = "eacl"; - rev = "ec601f3a8da331dd0a9e7a93d40ae3925bd06700"; - sha256 = "1kgayh2q97rxzds5ba1zc9ah08kbah9lqbwhmb7pxxgvgx9yfagg"; + rev = "0e4d4e016caedbfed8dea0e700a33a043e798029"; + sha256 = "06dcv3ws91ldld3qjpbpp5j7jnjp0s8ng6g7w8wj0rspjbcb2dg5"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/8223bec7eed97f0bad300af9caa4c8207322d39a/recipes/eacl"; @@ -16109,12 +16172,12 @@ easy-hugo = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "easy-hugo"; - version = "20180103.1855"; + version = "20180225.2153"; src = fetchFromGitHub { owner = "masasam"; repo = "emacs-easy-hugo"; - rev = "abf4dfcddacfc90ee39aad3c9e2e4615fb74c6a1"; - sha256 = "1kxkqpf0xq6w1g8qvy32hjqy42mz17c36wrkqqwdbxhbq7d5ckyw"; + rev = "336fb8ec510c10596d65bfd50f65b59e2f7711e9"; + sha256 = "1bkd3q8lr9admpipad1vi42gvs1sv7l7rzgi6dhl799zq1691kd3"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/easy-hugo"; @@ -16218,8 +16281,8 @@ src = fetchFromGitHub { owner = "mrkkrp"; repo = "ebal"; - rev = "3a7a9a66efed30416e2013da80fed2f79b91def1"; - sha256 = "0vxxswbx8l9jcv81akw1bd7ra4k51gjmv79z11fhbzf17n7y910a"; + rev = "b7e5f2c730036197cfa7d819006b91b4dcc2efba"; + sha256 = "0zbcx5ksf02kv7vavdnixblb8xk3zipwp5nrlyxyshmksw7qg3wh"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/629aa451162a0085488caad4052a56366b7ce392/recipes/ebal"; @@ -16256,12 +16319,12 @@ ebib = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, parsebib, seq }: melpaBuild { pname = "ebib"; - version = "20180204.1402"; + version = "20180213.531"; src = fetchFromGitHub { owner = "joostkremers"; repo = "ebib"; - rev = "7212edd2f54f2e289230b8d884dfcb3155c65fcc"; - sha256 = "11fmi0pxx83qmhh62ilc6i2icrl7x8pj34rrkxlc5plyph8cczjd"; + rev = "cbad0a51d7905712201d83e9f4f52a7bb047652f"; + sha256 = "1jmg63q4msy83nr0xzivay9n8nv48kawqj5jxlfq83fwkvnk1szm"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/4e39cd8e8b4f61c04fa967def6a653bb22f45f5b/recipes/ebib"; @@ -16302,8 +16365,8 @@ src = fetchFromGitHub { owner = "emacs-eclim"; repo = "emacs-eclim"; - rev = "4f27d04c30a026f24c0ff18c3a7d36e3fb5b57a5"; - sha256 = "1krrm123vzv6hw54kbkbh1xj6j090rdm4r2fcqp76b3hg8j8cpn1"; + rev = "6396ad1cd25c0a197109343ec1cce5d5080acdff"; + sha256 = "04ci3qb3vgqdvsdfivhwfsxrgalh61b41bsr1cafk4gv3g3rdr13"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/1e9d3075587fbd9ca188535fd945a7dc451c6d7e/recipes/eclim"; @@ -16739,12 +16802,12 @@ editorconfig-charset-extras = callPackage ({ editorconfig, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "editorconfig-charset-extras"; - version = "20170712.108"; + version = "20180222.2057"; src = fetchFromGitHub { owner = "10sr"; repo = "editorconfig-charset-extras-el"; - rev = "bf2d23c57a485ee41d21a9a0015d5bd52baabf85"; - sha256 = "0qgg2v9xpr8bm97pj4pxd9q6j8i6h94gb1j7lla0sn80cwymxwrx"; + rev = "ddf60923c6f4841cb593b2ea04c9c710a01d262f"; + sha256 = "1v5a6s4x7cm6i0bxaqdpsg8vqj479lp5h45glx4ipk0icdq8cvd9"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/62f27dad806fa135209289933f2131ee4ce8f8bf/recipes/editorconfig-charset-extras"; @@ -16919,8 +16982,8 @@ src = fetchFromGitHub { owner = "egisatoshi"; repo = "egison3"; - rev = "bbcd5d93f3cd61b593c4d565a374ccc8bafa9020"; - sha256 = "19am1hmi3gjpwqmjnlsqdnvwr225y212lr9ff37jkyhdfny71lnr"; + rev = "a41addef812318bb6bc0a693ce3a22606f27a3cf"; + sha256 = "1303m6d53qdkv3j7bx708ipvrjb4mjdj1b58600x8471bddamgh3"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/f543dd136e2af6c36b12073ea75b3c4d4bc79769/recipes/egison-mode"; @@ -16997,12 +17060,12 @@ ein = callPackage ({ auto-complete, cl-generic, dash, deferred, fetchFromGitHub, fetchurl, lib, melpaBuild, request, request-deferred, s, skewer-mode, websocket }: melpaBuild { pname = "ein"; - version = "20180124.1435"; + version = "20180226.416"; src = fetchFromGitHub { owner = "millejoh"; repo = "emacs-ipython-notebook"; - rev = "63388e5d0cf318bdb687054e2de4a4205108ed73"; - sha256 = "0c1pd2d0yv0d4zclh6ri1mwcj1pa7bxbf376kwia4rz400jx5fah"; + rev = "7a52ebca3527d891ecb7e8a3e46785b271717acc"; + sha256 = "01ifzww8gs4qy9yrhhf5dm0s3ifrlppknvllkajfp6lh9hc7q4cx"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/215e163755fe391ce1f049622e7b9bf9a8aea95a/recipes/ein"; @@ -17070,12 +17133,12 @@ ejc-sql = callPackage ({ auto-complete, clomacs, dash, direx, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, spinner }: melpaBuild { pname = "ejc-sql"; - version = "20180212.55"; + version = "20180215.627"; src = fetchFromGitHub { owner = "kostafey"; repo = "ejc-sql"; - rev = "0981cdf3ecef13a6be1d15bfad303d71ba85e625"; - sha256 = "105y6rfyfcdgzc0xi3dy7y919dm51330sbg2acfpgsqkmiwpp6j7"; + rev = "ef19d5e33b632d776e9e369281c522e26e632384"; + sha256 = "1q8gh79rfcn4v8ps4z3a0s60qr5nf9j93p0mkq0fdll57h2y6cbz"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/8f2cd74717269ef7f10362077a91546723a72104/recipes/ejc-sql"; @@ -17116,8 +17179,8 @@ src = fetchFromGitHub { owner = "dimitri"; repo = "el-get"; - rev = "63fa39d86deba5d03ac8f7f9a103e94d6c80739d"; - sha256 = "15jxnkvgk700qi79d8jj96ss2mb7yfsgzhi0mama4dp5gancps27"; + rev = "129789cef476279a7840647a5bf39aa5cd2bc2f6"; + sha256 = "0b20s3bc92jwi4xl2fralj0ffdj1zvagbmnsp2dw5cj94dhm33p1"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/1c61197a2b616d6d3c6b652248cb166196846b44/recipes/el-get"; @@ -17364,12 +17427,12 @@ el2org = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "el2org"; - version = "20170804.2142"; + version = "20180216.2005"; src = fetchFromGitHub { owner = "tumashu"; repo = "el2org"; - rev = "4a33469cd305e581603d7ef63bc2a1f2156f2e2e"; - sha256 = "0mzddqny6wpg1fv99xrvlv7rxmaifvmy5bvj4in4pldhm4cx4q1b"; + rev = "742b2e4de42026edbff20dfcc6f63200c1d0ad40"; + sha256 = "0ji8ngf6zzhhq2vhn9i04dpgg1sgqcs0vzq7wdyfl9cfa0cpwlps"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/el2org"; @@ -17385,12 +17448,12 @@ elbank = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, seq }: melpaBuild { pname = "elbank"; - version = "20180206.701"; + version = "20180215.556"; src = fetchFromGitHub { owner = "NicolasPetton"; repo = "Elbank"; - rev = "817047305e9db1260956ae5ac6b60c9027868895"; - sha256 = "0i5nqfjm69kbvnkvrcvfv8gbz0608cldmi3zwq2vpld7p35d5d26"; + rev = "f494716105b1a9f4f52f43bc3dd37c9cd0309bf5"; + sha256 = "0bvx6nq0gjjbjs0mzd1x1ajyjpa181z0n4kv4aknh3is210gbpbb"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/05d252ee84adae2adc88fd325540f76b6cdaf010/recipes/elbank"; @@ -17406,12 +17469,12 @@ elcontext = callPackage ({ emacs, f, fetchFromGitHub, fetchurl, ht, hydra, lib, melpaBuild, osx-location, uuidgen }: melpaBuild { pname = "elcontext"; - version = "20180204.138"; + version = "20180225.2211"; src = fetchFromGitHub { owner = "rollacaster"; repo = "elcontext"; - rev = "c223476b62a55b80f6b85b2e016d3ec0d7ec9875"; - sha256 = "1ynwgr1g421liyfyfli2cgfdqx3gijm4z9hd0cmhndfwalrb1xq6"; + rev = "d34e68f0580cc3d3eda8c85fc446c71094fc52fc"; + sha256 = "05z0xfy9s0iqzvy63bnfhdpqc04yikwairb8b00k9xkspd3sdfdl"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/12bcb0bfc89c1f235e4ac5d7e308e41905725dc6/recipes/elcontext"; @@ -17595,12 +17658,12 @@ elfeed = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "elfeed"; - version = "20180127.1442"; + version = "20180222.746"; src = fetchFromGitHub { owner = "skeeto"; repo = "elfeed"; - rev = "e2b0e255fc3a3cb3e9d69c05df3b8e9d7ca70e86"; - sha256 = "1sq2w40ac8nc6pvifl0r5ri255jcd237x5rxfliwd2wdwqhk9izd"; + rev = "8668227f93a46fdd8d5d8746d428dd2da061e253"; + sha256 = "0v2ymm9bwwhdp4ar0da9d9g8qyw8nj47jjlqcr0d3f8sljn9d35s"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/407ae027fcec444622c2a822074b95996df9e6af/recipes/elfeed"; @@ -17690,8 +17753,8 @@ src = fetchFromGitHub { owner = "skeeto"; repo = "elfeed"; - rev = "e2b0e255fc3a3cb3e9d69c05df3b8e9d7ca70e86"; - sha256 = "1sq2w40ac8nc6pvifl0r5ri255jcd237x5rxfliwd2wdwqhk9izd"; + rev = "8668227f93a46fdd8d5d8746d428dd2da061e253"; + sha256 = "0v2ymm9bwwhdp4ar0da9d9g8qyw8nj47jjlqcr0d3f8sljn9d35s"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/62459d16ee44d5fcf170c0ebc981ca2c7d4672f2/recipes/elfeed-web"; @@ -17788,22 +17851,22 @@ license = lib.licenses.free; }; }) {}; - elisp-lint = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: + elisp-lint = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "elisp-lint"; - version = "20150430.1558"; + version = "20180224.1242"; src = fetchFromGitHub { - owner = "nschum"; + owner = "gonewest818"; repo = "elisp-lint"; - rev = "1168b12575f1ed54ee523d34a90757459a6e42a3"; - sha256 = "1ci6nyk1vvb3wgxzarbf6448i9rjb74zzrhcmls634gfxbryxdyy"; + rev = "04b0d36ec0e4dc1bb54c2bf4c2d16b2af8cf6a39"; + sha256 = "04hxpfgvkh4ivaxqbhnp3j68i1kqzg1v19bssnvcagll2mm4r3xg"; }; recipeFile = fetchurl { - url = "https://raw.githubusercontent.com/milkypostman/melpa/3744ee1bbde7ec8cecf2796d6ee875c327eb698c/recipes/elisp-lint"; - sha256 = "102hrxdw72bm11a29i15g09lv7jlnd7vkv7292fm3mcxf5f4hkw9"; + url = "https://raw.githubusercontent.com/milkypostman/melpa/61595c78ac7f15eef47bf28636ad796f74741509/recipes/elisp-lint"; + sha256 = "13cxcn0qp63f2nkv37c3w47dby9cqm4l1f8xilgpczdaxd86kd63"; name = "elisp-lint"; }; - packageRequires = []; + packageRequires = [ emacs ]; meta = { homepage = "https://melpa.org/#/elisp-lint"; license = lib.licenses.free; @@ -17879,8 +17942,8 @@ src = fetchFromGitHub { owner = "elixir-lang"; repo = "emacs-elixir"; - rev = "861788186f4dbd500209656dcf38a15b3efe74dd"; - sha256 = "1py8slpda3vsw88v1wp1imnn3r17hz54621c6ks8xm75lnhn60ra"; + rev = "e928aaf118e399fca2df47c91712b9a469eb1764"; + sha256 = "0x0ip0mh7zn6lmzj3p3v3jlc9x1j0afrq5rfgi22zk40zkyh26zn"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/6374ced0de38d83bf99147f702f30706615480ed/recipes/elixir-mode"; @@ -18148,12 +18211,12 @@ elpy = callPackage ({ company, emacs, fetchFromGitHub, fetchurl, find-file-in-project, highlight-indentation, lib, melpaBuild, pyvenv, s, yasnippet }: melpaBuild { pname = "elpy"; - version = "20180210.1445"; + version = "20180223.1119"; src = fetchFromGitHub { owner = "jorgenschaefer"; repo = "elpy"; - rev = "a86165de49f44013ba07d92d90f949a22ff9299a"; - sha256 = "0b2qpsxrda2h2x82sqqqg7vqi6a1hx1jagri4al7sl9s74axdkr4"; + rev = "0c51b0d3aede3e3e3d2107ea86d133c669220948"; + sha256 = "1404r7al2rndy2nqfgdm2iw37mn2dr9hb51fr5f0l0w34mhfhyji"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/1d8fcd8745bb15402c9f3b6f4573ea151415237a/recipes/elpy"; @@ -18765,11 +18828,11 @@ emms = callPackage ({ cl-lib ? null, fetchgit, fetchurl, lib, melpaBuild }: melpaBuild { pname = "emms"; - version = "20180103.520"; + version = "20180217.1219"; src = fetchgit { url = "https://git.savannah.gnu.org/git/emms.git"; - rev = "3a8d16d91edae81ffb2bb9efa12d41712edfd4f8"; - sha256 = "1cwsjrjasb2gi28aavy64g4sg9wwfq3wab24klssh3290qrr3gkb"; + rev = "0459003a1686b5742e660d08e7c936d1b06e8e7c"; + sha256 = "1gym522bhxbip4vfg0lxkpjnb00nb4rh08xdmz33r71rclh4vrkv"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/caaa21f235c4864f6008fb454d0a970a2fd22a86/recipes/emms"; @@ -19414,12 +19477,12 @@ epkg = callPackage ({ closql, dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "epkg"; - version = "20180112.457"; + version = "20180221.1318"; src = fetchFromGitHub { owner = "emacscollective"; repo = "epkg"; - rev = "c8ab0e5e1fda70113633ac6ee01c0aaecd8a1a99"; - sha256 = "0kf1gcyfmh7zids4q2jwz6b0kffdhalfqx9ibk11adla8sf6bvj0"; + rev = "5d0bf705ccb617fafe28f2748d566d2a990aba06"; + sha256 = "1igiwnvl3w907hz83x8hwf298wdv86s5c54zs4naw1pbi875j7zw"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/2df16abf56e53d4a1cc267a78797419520ff8a1c/recipes/epkg"; @@ -19896,12 +19959,12 @@ eredis = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "eredis"; - version = "20160809.2053"; + version = "20180221.1313"; src = fetchFromGitHub { owner = "justinhj"; repo = "eredis"; - rev = "0d7d524592be488309c7c339d137ba836e52bfff"; - sha256 = "0hj8czwqzdjs7ciyg4xf0imdqfv423c6q862gy83ni09zk5ncm3i"; + rev = "8a96034805fe0664132ce2e12deb9936503af2d4"; + sha256 = "1w4z98vr7iy6yxdk3lha7flk48ckxl2baaq8kx7abkirzfl8j4hh"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/63f06713d06911f836fe2a4bf199b0794ac89cf0/recipes/eredis"; @@ -19984,8 +20047,8 @@ src = fetchFromGitHub { owner = "erlang"; repo = "otp"; - rev = "5e7286acceec0811fd95898c7337921ac91c97b4"; - sha256 = "0ccynwiajdcb3h2xhb2y91kgf61pj9i3h3h4g4d6142j3mr4anl4"; + rev = "1c7938bc9539f1c06b5493ced9f265e05a4824af"; + sha256 = "0vrrxh4ngbmsr2iaw5hqr0xf43vnbqghql2sm9ffm0zh6snd4kag"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/d9cd526f43981e0826af59cdc4bb702f644781d9/recipes/erlang"; @@ -20064,11 +20127,11 @@ ert-junit = callPackage ({ ert ? null, fetchgit, fetchurl, lib, melpaBuild }: melpaBuild { pname = "ert-junit"; - version = "20180207.1348"; + version = "20180208.935"; src = fetchgit { url = "https://bitbucket.org/olanilsson/ert-junit"; - rev = "45a359a94dbeb00838df5dbee15ad42e061af431"; - sha256 = "05nwq8w7rczmn41bxz97sinn561rx8vb01dv0hsx0xllni7xwf59"; + rev = "b335d7fb84d6af381a5dbc40c324078faf397b66"; + sha256 = "0nbpqhpff3my4ndsf148iqgnl84ilsbq6na5jnn3nddyhbmidcxb"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/27c627eacab54896a1363dbabc56250a65343dd8/recipes/ert-junit"; @@ -20105,12 +20168,12 @@ ert-runner = callPackage ({ ansi, commander, dash, f, fetchFromGitHub, fetchurl, lib, melpaBuild, s, shut-up }: melpaBuild { pname = "ert-runner"; - version = "20171111.451"; + version = "20180215.857"; src = fetchFromGitHub { owner = "rejeep"; repo = "ert-runner.el"; - rev = "80ff435058f0e9815d0ac8c7a53143c474e00db3"; - sha256 = "1mgbrfgdvby25aaw3l9d0h4b7h5zap6s1m1vlxmmv20fhxza7wbc"; + rev = "0de42343a9de834320397d169c81725b2827e41f"; + sha256 = "0jc7n6mdv1kka47wmjjhgfw46l16mqlj5kkkyw16gd9g8dwcf6sr"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/0a1acc68f296e80b6ed99a1783e9f67be54ffac9/recipes/ert-runner"; @@ -20147,12 +20210,12 @@ es-mode = callPackage ({ cl-lib ? null, dash, fetchFromGitHub, fetchurl, lib, melpaBuild, request, s, spark }: melpaBuild { pname = "es-mode"; - version = "20180126.711"; + version = "20180212.1425"; src = fetchFromGitHub { owner = "dakrone"; repo = "es-mode"; - rev = "8c1c601a72fbc9b0e0a80974856abfc679843c86"; - sha256 = "0ppci48cz453ivkd37zbs3sgan0v7nf9d65qy77zvkn55qn2f4bq"; + rev = "c5ad728ce3fc2c513108e0ada2cd0c08ab94f870"; + sha256 = "0drmxxqgml36fymn4gqxbjimh8dgmm4yr68hsmsd0iz1lxglgda1"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/9912193f73c4beae03b295822bf41cb2298756e2/recipes/es-mode"; @@ -20235,8 +20298,8 @@ src = fetchFromGitHub { owner = "dieggsy"; repo = "esh-autosuggest"; - rev = "aa921f8975b0f95d1cb0044e6ad7f17529261610"; - sha256 = "19qhpvw5y7hvkqy8jdyrnm4m90jdxxdiaabcrjiwxmkzq3wgnx8q"; + rev = "2fd996c1a29b21e60854a3c90d7d4fc3d5b0aded"; + sha256 = "1vkbyhkvvj5h63ybxg795m61c4157jm2v01y9m98jm4pxysmls7m"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/dc3776068d6928fc1661a27cccaeb8fb85577099/recipes/esh-autosuggest"; @@ -20609,12 +20672,12 @@ ess = callPackage ({ fetchFromGitHub, fetchurl, julia-mode, lib, melpaBuild }: melpaBuild { pname = "ess"; - version = "20180211.1419"; + version = "20180216.1616"; src = fetchFromGitHub { owner = "emacs-ess"; repo = "ESS"; - rev = "2622184dca12e76c856443251ee61066af5392ee"; - sha256 = "0w7c7g8kxni5bgaxmmjp57z5di7r500yvvcpldr0n4cjx7qf9gjg"; + rev = "f10792493602cb5c77a7010b1b4c7063c7c41add"; + sha256 = "03spbyi24gpmw7wlf0aifg0aa793sm0s1lxk9xw2lm974rj0g6w7"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/12997b9e2407d782b3d2fcd2843f7c8b22442c0a/recipes/ess"; @@ -20714,12 +20777,12 @@ esup = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "esup"; - version = "20170923.1328"; + version = "20180226.254"; src = fetchFromGitHub { owner = "jschaf"; repo = "esup"; - rev = "a589005a9a888537deef94d6fe38a9b8790c97c7"; - sha256 = "04lxmd0h7mfjjl0qghrycgff0vcv950j1wqv0dbkr61jxp64n5fv"; + rev = "d4db4f3023afff4321cd3f99be75ad44e77cd0b0"; + sha256 = "1z8ban35vrkibr07awfg6z4cy79irjiz6hchcyid94l6iifbwf0y"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/b9d2948a42da5d4864404d2d11a924a4f235fc3b/recipes/esup"; @@ -20966,12 +21029,12 @@ evil = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, goto-chg, lib, melpaBuild, undo-tree }: melpaBuild { pname = "evil"; - version = "20180126.1159"; + version = "20180222.1032"; src = fetchFromGitHub { owner = "emacs-evil"; repo = "evil"; - rev = "2992858748e6fe8ae706d182b86b684e7b9be8b9"; - sha256 = "18jyqf1k7b09j0q1sxavqyqyx21msbqklia83kbrn51wbhy70k49"; + rev = "3bf198796b2d135776143eac854e8d855cd94475"; + sha256 = "0bzmq988x9734dxgjli70r9dpa3kagbz43md79zr32q4z96rj4y4"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/440482c0edac8ee8bd4fe22f6bc5c1607f34c7ad/recipes/evil"; @@ -21113,12 +21176,12 @@ evil-collection = callPackage ({ emacs, evil, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "evil-collection"; - version = "20180202.1722"; + version = "20180226.21"; src = fetchFromGitHub { owner = "jojojames"; repo = "evil-collection"; - rev = "f04fd5eef32728cb146d2dc5f3701b1d4733a2bf"; - sha256 = "12magy7l325cfi25b8y8gd5b9n3smhn3w07mxb4nbp3rfg7nv2db"; + rev = "7adf05cf25b022197c0542920ddc65acdae1703e"; + sha256 = "1cxsi0aqm2fd344q6nlahhg0q2bf4k6gagi6sxsvjlhwvb80skxq"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/d7538c9eb00b6826867891b037e7aa537ac5b160/recipes/evil-collection"; @@ -22020,8 +22083,8 @@ src = fetchFromGitHub { owner = "emacs-evil"; repo = "evil-surround"; - rev = "5a20c9757eff64e1567d313eb254126aef2bf3b2"; - sha256 = "094vz707iyjknmhmhdlzc8sv8x86yxgx863c23nm6fjn5n5h7jmz"; + rev = "2af81ab3ac64e4b0515a157a672d8cb89f0172b9"; + sha256 = "00bcz353cc82wpk5cai5ni99z2la4gwm0k1fvanysx1amg8vxvfy"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/2c9dc47a4c837c44429a74fd998fe468c00639f2/recipes/evil-surround"; @@ -22104,8 +22167,8 @@ src = fetchFromGitHub { owner = "emacs-evil"; repo = "evil"; - rev = "2992858748e6fe8ae706d182b86b684e7b9be8b9"; - sha256 = "18jyqf1k7b09j0q1sxavqyqyx21msbqklia83kbrn51wbhy70k49"; + rev = "3bf198796b2d135776143eac854e8d855cd94475"; + sha256 = "0bzmq988x9734dxgjli70r9dpa3kagbz43md79zr32q4z96rj4y4"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/87da8c50f9167ad9c3844b23becb6904f809611d/recipes/evil-test-helpers"; @@ -22230,8 +22293,8 @@ src = fetchFromGitHub { owner = "alexmurray"; repo = "evil-vimish-fold"; - rev = "4db872d12274fdddf7c6e9d01cf68cbad9cfcf15"; - sha256 = "05phnswbk2r7hdwawzkw6anhkfss9ig8sy469s4vsrqf7cky4gmn"; + rev = "c617fecb91303f8c63f85a6101a503fdc88aae84"; + sha256 = "05zm0gngdamfs5cqnjq4lh7253hdj0lggdgfphl56ynblhf8qf36"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/fcd51e24f88ebbbd3fddfc7c6f3b667d5104cf2b/recipes/evil-vimish-fold"; @@ -22394,12 +22457,12 @@ exec-path-from-shell = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "exec-path-from-shell"; - version = "20170508.4"; + version = "20180224.1916"; src = fetchFromGitHub { owner = "purcell"; repo = "exec-path-from-shell"; - rev = "5e355fbc50913d1ffe48bf86df0bcecd8b369ffb"; - sha256 = "1flkhbyxa7mi97vj4w6c2anzq7qz51sac6yqk308blfvd9z3pf95"; + rev = "885b3de9bb6365771dd09f5267f6ff843d5109e8"; + sha256 = "0x5a0v4z5hgvi7biwbsbxw9l8in0gxwrz77g9vffz9djvlr70r1h"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/exec-path-from-shell"; @@ -22435,12 +22498,12 @@ exotica-theme = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "exotica-theme"; - version = "20180211.1557"; + version = "20180212.1529"; src = fetchFromGitHub { owner = "jbharat"; repo = "exotica-theme"; - rev = "e8e4fbb77008bbb50e6733571655e815cc30a5bf"; - sha256 = "1igbis1784f2hs2cdva87nhzjfxaj6h14n2k07r4fy3igfd9qfa0"; + rev = "ff3ef4f6fa38c93b99becad977c7810c990a4d2f"; + sha256 = "1kp6q55g3dcya4y79x877vqwxa4z2rkkvhs49pkwr3wljf4af2pd"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/9182f92dd62e2f1775a76699a6c8f9c3e71e9030/recipes/exotica-theme"; @@ -22624,12 +22687,12 @@ exwm-x = callPackage ({ bind-key, cl-lib ? null, counsel, exwm, fetchFromGitHub, fetchurl, ivy, lib, melpaBuild, swiper, switch-window }: melpaBuild { pname = "exwm-x"; - version = "20170916.2015"; + version = "20180225.1531"; src = fetchFromGitHub { owner = "tumashu"; repo = "exwm-x"; - rev = "abb210ff56134cc6a285d91b875f3115bc951ad0"; - sha256 = "1l7578jfn3va6bpkjfbazygsn8asxhc7cpss32mnsrzkm1ix6sz8"; + rev = "d26d719d95b3b3296e113d89ef36972312610f4e"; + sha256 = "0n0b7gxamizmkm2gz1ghyg36i7wvy5ims63nzjgwhbrc3ifig6cn"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/a0e6e23bcffdcd1e17c70599c563609050e5de40/recipes/exwm-x"; @@ -23343,12 +23406,12 @@ find-file-in-project = callPackage ({ emacs, fetchFromGitHub, fetchurl, ivy, lib, melpaBuild }: melpaBuild { pname = "find-file-in-project"; - version = "20180201.2102"; + version = "20180224.2103"; src = fetchFromGitHub { owner = "technomancy"; repo = "find-file-in-project"; - rev = "cf20dda6050b11bee871b55f758716d8daa07b46"; - sha256 = "0f4mkhdb56bnyp7wkg4bkv74rl51k4dxciv0zqf5x91lfzhz8jd0"; + rev = "aba912a73d1f3fcff0d184b49008a2fa1655ad7e"; + sha256 = "145n04lid9alrm8nl6gfnll75jz1ssli48pbsc9zyva00ryk83my"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/cae2ac3513e371a256be0f1a7468e38e686c2487/recipes/find-file-in-project"; @@ -23574,12 +23637,12 @@ firrtl-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "firrtl-mode"; - version = "20180122.1950"; + version = "20180221.1555"; src = fetchFromGitHub { owner = "ibm"; repo = "firrtl-mode"; - rev = "285f5c18722de98fd3dae195a2bd653497cf7daa"; - sha256 = "1a4dhx2dv7ld14jn4r941w5mdrh085nxnlc1w93r93h13fj352q3"; + rev = "1ac00d526018945389bcb2292dbdd8395381774a"; + sha256 = "02xznsiij39lhjr261vl7yz4k4i76vshh5kwa7ax95zpj2zbs0v6"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/8bbf9ab9db03410c35b8b73a23bf8062b10f0815/recipes/firrtl-mode"; @@ -23641,8 +23704,8 @@ src = fetchFromGitHub { owner = "mrkkrp"; repo = "fix-input"; - rev = "e053fcc641f1f835f2fdb71143e095c1889b8233"; - sha256 = "1w8vv2ijmsch02xsc1r97r6s3jz0dkd8kwz5wgiizq5ghx7x6x6j"; + rev = "37bc0734a2e71d66245ee3960879577e5ef906bb"; + sha256 = "04k4wqsdbwxbq5a4dxvr3mqqsa5y3c0238llh2wig1r763ligm3j"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/7d31f907997d1d07ec794a4f09824f43818f035c/recipes/fix-input"; @@ -23683,8 +23746,8 @@ src = fetchFromGitHub { owner = "mrkkrp"; repo = "fix-word"; - rev = "3e3339f5d44dd8be100cec1c88bcaefd328a2bde"; - sha256 = "0hd5bhq57qgabs881xfrz1v1n8sp1nv2hrfs386dx7g5b3ancr0i"; + rev = "8e66b6a7b599c6c5098490e83ef4e69acf307603"; + sha256 = "1p8hz66fyzivvwwya0br3v7dx0fqna9jw9291zgshvhxbin867fp"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/22636390e8a15c09293a1506a901286dd72e565f/recipes/fix-word"; @@ -24018,6 +24081,27 @@ license = lib.licenses.free; }; }) {}; + flower = callPackage ({ clomacs, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "flower"; + version = "20180222.1112"; + src = fetchFromGitHub { + owner = "PositiveTechnologies"; + repo = "flower"; + rev = "6a9ba9f25daecfb994b8d71afbf9ab0cc9de5349"; + sha256 = "1i95nqbcqm0gld74g5r42wwpsgdlv8fjalr8kgcn09wzg4glpvrk"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/c8a731715d360aea9af2b898242fd4eee5419d14/recipes/flower"; + sha256 = "1cb9ppgspdrg4yrrlq4sfajpa6s7xiwvdf9b3947rmmxizgqgynd"; + name = "flower"; + }; + packageRequires = [ clomacs emacs ]; + meta = { + homepage = "https://melpa.org/#/flower"; + license = lib.licenses.free; + }; + }) {}; fluxus-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, osc }: melpaBuild { pname = "fluxus-mode"; @@ -24105,12 +24189,12 @@ flycheck = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, let-alist, lib, melpaBuild, pkg-info, seq }: melpaBuild { pname = "flycheck"; - version = "20180211.911"; + version = "20180224.1046"; src = fetchFromGitHub { owner = "flycheck"; repo = "flycheck"; - rev = "b1c1ead1292b56fdb59916cf9a2e36312979f205"; - sha256 = "1dqkn8j0k2wiv7ycfxgqiblj2dnj95aj7yyy9ijbw1prqmr5dy06"; + rev = "b0edfef87457a13118450969696a68505cce936d"; + sha256 = "146v50nl2a4ryd7p9lpavah01idlsjg3ff1pb0bnblprrs9sg0fw"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/649f9c3576e81409ae396606798035173cc6669f/recipes/flycheck"; @@ -24252,12 +24336,12 @@ flycheck-clang-analyzer = callPackage ({ emacs, fetchFromGitHub, fetchurl, flycheck, lib, melpaBuild }: melpaBuild { pname = "flycheck-clang-analyzer"; - version = "20170704.2333"; + version = "20180225.2039"; src = fetchFromGitHub { owner = "alexmurray"; repo = "flycheck-clang-analyzer"; - rev = "a33752224cb1da13b35d0d60b2017fe73d167781"; - sha256 = "1f6nb92fg1lgf4xz8x1i61njwnqrab94p88kliaa7g9r4hfhgv8j"; + rev = "adc9e7663bafcc9b740c09b691898413627e74ab"; + sha256 = "10c45myq9vgsssp5v3vnip4klj9dxk8dh42zap44f9lw99ascx2r"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/8de7b717a1b0caf30f8f29d3e764b4756b93aeff/recipes/flycheck-clang-analyzer"; @@ -24588,12 +24672,12 @@ flycheck-dmd-dub = callPackage ({ f, fetchFromGitHub, fetchurl, flycheck, lib, melpaBuild }: melpaBuild { pname = "flycheck-dmd-dub"; - version = "20180208.855"; + version = "20180220.15"; src = fetchFromGitHub { owner = "atilaneves"; repo = "flycheck-dmd-dub"; - rev = "0b374e5cd3cc87954e3b6193a671dbc060d88339"; - sha256 = "0g357wm84yc80g3cfxm6ffk15jw49za3qsfh60jij8619k1d6719"; + rev = "3d378a59492c810842b7c72506d2037bf70b8545"; + sha256 = "0y8iqyml27sx2d765w2hhbyrdx0alaqvj5ls8x1zf53xfwv88x3z"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/a812594901c1099283bdf51fbea1aa077cfc588d/recipes/flycheck-dmd-dub"; @@ -24693,12 +24777,12 @@ flycheck-flow = callPackage ({ fetchFromGitHub, fetchurl, flycheck, json ? null, lib, melpaBuild }: melpaBuild { pname = "flycheck-flow"; - version = "20171121.514"; + version = "20180216.1156"; src = fetchFromGitHub { owner = "lbolla"; repo = "emacs-flycheck-flow"; - rev = "d9d1262b9139df1cab8072e5ab15563571f32b8f"; - sha256 = "0lahgqjp6w8c8b9bfgc3awajlwgr99zsly3jylnd0waiwps5gknz"; + rev = "8173accf0e389f7ba0936d399da84839a7f887af"; + sha256 = "14g3mi8i4iy5f3fd3f7yx8ha18zi0kxqgn3sxkvdnk9rp1cdfnk1"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/4d18fb21d8ef9b33aa84bc26f5918e636c5771e5/recipes/flycheck-flow"; @@ -25390,8 +25474,8 @@ src = fetchFromGitHub { owner = "Andersbakken"; repo = "rtags"; - rev = "2b0c88cc470b06b65232c23df4b6fbfc4b534580"; - sha256 = "047w0khlcawwr9rz7ss52x9jzam4pdqd1cwgx7nqiyv3cd47xfsy"; + rev = "4f27c1cc60742622e6616b579c82b5440ad446d3"; + sha256 = "08310vkd7gyfc9jcis7r5dfdb6spilxw1kf7p8vm078v8hmmjyj0"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3dea16daf0d72188c8b4043534f0833fe9b04e07/recipes/flycheck-rtags"; @@ -25411,8 +25495,8 @@ src = fetchFromGitHub { owner = "flycheck"; repo = "flycheck-rust"; - rev = "c5838f51d41e1330ec69b46e09f25f9764be1d2a"; - sha256 = "1app3vcv1myabj8wmla5dpifh63c21bmljqvvykz8a9d7hagq3gc"; + rev = "962f18603c45e3f9a84d059886c7d13178cbf31e"; + sha256 = "0c3lnfj1z27q1pyhfzwxh26ska1wvcnmqmdzpc6zps72prjfdknd"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/68d8cdf3d225b13ebbbe5ce81a01366f33266aed/recipes/flycheck-rust"; @@ -25663,8 +25747,8 @@ src = fetchFromGitHub { owner = "abingham"; repo = "emacs-ycmd"; - rev = "e21c99de8fd2992031adaa758df0d495e55d682a"; - sha256 = "1l9xsqlcqi25mdka806gz3h4y4x0dh00n6bajh3x908ayixjgf91"; + rev = "a35a2ddd911da6d3a926bdef2614a2898055a5e2"; + sha256 = "1nig77gqi74k01309r3nfy45ylhi5mj7ajxlhib6i58zlib8ycbl"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/flycheck-ycmd"; @@ -26104,8 +26188,8 @@ src = fetchFromGitHub { owner = "benprew"; repo = "flymake-puppet"; - rev = "9579e5c736cb890195464fabf51df113313de88d"; - sha256 = "1bk16l8rbvrwmcd0zd2yg8xmfn7b036716niy21wfizmar0pk7p7"; + rev = "8a772395f4ccc59d883712ab53a92a17c1d9a429"; + sha256 = "00w87qa7r8rigmpv58vpjwpn9x13sv7db5m6z4cqh76qkgkghgqi"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/302dbe34e7949da9c65e9c7bf2ab924db91b968f/recipes/flymake-puppet"; @@ -26415,12 +26499,12 @@ flyspell-lazy = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "flyspell-lazy"; - version = "20141222.652"; + version = "20180224.1306"; src = fetchFromGitHub { owner = "rolandwalker"; repo = "flyspell-lazy"; - rev = "31786fe04a4732d2f845e1c7e96fcb030182ef10"; - sha256 = "1g09s57b773nm9xqslzbin5i2h18k55nx00s5nnkvx1qg0n0mzkm"; + rev = "3ebf68cc9eb10c972a2de8d7861cbabbbce69570"; + sha256 = "1n67y90vm041mz172gjqypw3b5za5f18sic54h7wz4a9naynwyb6"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/a082c2dc0458e3007a947923f5b97e88217199e8/recipes/flyspell-lazy"; @@ -26625,12 +26709,12 @@ fold-this = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "fold-this"; - version = "20150601.342"; + version = "20180224.40"; src = fetchFromGitHub { owner = "magnars"; repo = "fold-this.el"; - rev = "90b41d7b588ab1c3295bf69f7dd87bf31b543a6a"; - sha256 = "1cbabpyp66nl5j8yhyj2jih4mhaljxvjh9ij05clai71z4598ahn"; + rev = "4fb509a4176e950d083a5321ad62742f2e9bcb7b"; + sha256 = "1csazxx6wnnriklbrdqxmf7nc67gqb7c5zppr797bk4j4calskgf"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/9853fcb99bd8717c77fa2b3bafb6e85d0d5d491c/recipes/fold-this"; @@ -26772,12 +26856,12 @@ foreign-regexp = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "foreign-regexp"; - version = "20160318.907"; + version = "20180224.321"; src = fetchFromGitHub { owner = "k-talo"; repo = "foreign-regexp.el"; - rev = "e368c4dbd3b7a95a14cbc3c25617b5f1bc5a7fb4"; - sha256 = "1459hy5kgp0dkzy1jab41aibixgmrk9lk6ysn1801spd8gwph371"; + rev = "2ec5c44f27c2396ee487aa0ed77ae47d143fa5aa"; + sha256 = "0zww0q8x99sfwzf05pk7blsi3v8xiw4xgmlwnv1qlf2qxjkz1xhb"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/d05514013948a520cf0dcaf1dc2ef2300dd55e98/recipes/foreign-regexp"; @@ -26940,12 +27024,12 @@ fountain-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "fountain-mode"; - version = "20180211.2037"; + version = "20180215.2005"; src = fetchFromGitHub { owner = "rnkn"; repo = "fountain-mode"; - rev = "863e9a0d6753ce46e978819a624659ca8d4385a4"; - sha256 = "0smr5a19qvak45hx21j5g507jmrb1g5y19gz3n9yb82darlvpdh5"; + rev = "f131de1052d724f14c6c4a19d72978be7c70e5ad"; + sha256 = "04dqdzyiy6iqi9p8dy8k2zml5nmlrin0p60b9p5hhxabmkwawmbx"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/913386ac8d5049d37154da3ab32bde408a226511/recipes/fountain-mode"; @@ -27229,12 +27313,12 @@ fuel = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "fuel"; - version = "20180207.1149"; + version = "20180224.1411"; src = fetchFromGitHub { owner = "factor"; repo = "factor"; - rev = "5fb53c851ca2e37f9e71f165d5536d3fcd553466"; - sha256 = "1bqryhbz9hyjvfagss0rdffhpg0j1ay3c0al99dgs0gd3cx2dp42"; + rev = "f1030159af4a5998a8ea751a20fc8bd6598952da"; + sha256 = "18zy8nmbi6a79rs6n3d8qrm52640fxmg6s9xfflhkr5pprbwi8fn"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/1e2a0e4698d4e71ec28656594f6a83504a823490/recipes/fuel"; @@ -27359,8 +27443,8 @@ src = fetchFromGitHub { owner = "HIPERFIT"; repo = "futhark"; - rev = "f3a37a6f749262dee56b4dbdac3a974b2413ff95"; - sha256 = "0pddsg1map44sxdljb1gnrzcb60iahxa7hzzffc5q2y1a8iqpd8d"; + rev = "bb36b2c074449955649907449fa84bd3336528ce"; + sha256 = "1ji4bnwqpbhldjpnkdfvd05y8bv0nc0g52iza1q4azcw4qqdkwql"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/0607f01aad7e77d53595ad8db95d32acfd29b148/recipes/futhark-mode"; @@ -27689,12 +27773,12 @@ general = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "general"; - version = "20180130.2055"; + version = "20180215.1455"; src = fetchFromGitHub { owner = "noctuid"; repo = "general.el"; - rev = "63333fcc7fc181949601b75a4296fd3a338f287c"; - sha256 = "11lfia2jx1vaizd1afln0v5s8y2czkhrrdgn01j1mq104kapxain"; + rev = "de82992bba6226f1be3aac9ed6568f1a3b23295b"; + sha256 = "1693mrknq0mwzgwrh5z92nv7c80g6ynlymk5qfq8icpii4rlz5n2"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/d86383b443622d78f6d8ff7b8ac74c8d72879d26/recipes/general"; @@ -27983,16 +28067,16 @@ ghub = callPackage ({ emacs, fetchFromGitHub, fetchurl, let-alist, lib, melpaBuild }: melpaBuild { pname = "ghub"; - version = "20180201.414"; + version = "20180221.1319"; src = fetchFromGitHub { owner = "magit"; repo = "ghub"; - rev = "b267bb6c55b0c05aec4d3fe0e9385ab0e1139463"; - sha256 = "10rwl2nv8gk9bzj7cwmgzvcsscgb83aw5ag9jj7sv638w4acmn21"; + rev = "bd16d17006488bcbcea32b258752ddf625954c78"; + sha256 = "0fqkl0dhiqq53p51044aw1zx64phdqklz5c0c1kd3vx92j76zsp6"; }; recipeFile = fetchurl { - url = "https://raw.githubusercontent.com/milkypostman/melpa/d5db83957187c9b65f697eba7e4c3320567cf4ab/recipes/ghub"; - sha256 = "15kjyi8ialpr1zjqvw68w9pa5sigcwy2szq21yvcy295z7ylzy4i"; + url = "https://raw.githubusercontent.com/milkypostman/melpa/70a4dbd62fd6ebb4e056d0e97fa1a958437ddc91/recipes/ghub"; + sha256 = "031bzp61aal2id5sazwjz30svydjvxvphw5wbv5cyy4dqyh7w2ps"; name = "ghub"; }; packageRequires = [ emacs let-alist ]; @@ -28022,6 +28106,27 @@ license = lib.licenses.free; }; }) {}; + gif-screencast = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "gif-screencast"; + version = "20180226.212"; + src = fetchFromGitHub { + owner = "Ambrevar"; + repo = "emacs-gif-screencast"; + rev = "08eebb7e9dc583b02b86d2b62f25b7b8ff8bbd9e"; + sha256 = "1j3bp4ahwk6jdanqspqxhf6jvk78mad6zhn7ym88561hv4gq3ngk"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/b149509fb245975b450d15470c7d915e3c7b474d/recipes/gif-screencast"; + sha256 = "12kjr76b1180g3grfycghmgr3xf4vmhlhks8x3ri1gigdf0j8vaa"; + name = "gif-screencast"; + }; + packageRequires = [ emacs ]; + meta = { + homepage = "https://melpa.org/#/gif-screencast"; + license = lib.licenses.free; + }; + }) {}; gift-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "gift-mode"; @@ -28218,8 +28323,8 @@ src = fetchFromGitHub { owner = "magit"; repo = "magit"; - rev = "10a1f08f39373bfc2ed86858cf02d82bfcdb7be8"; - sha256 = "1bk1a34yi37gsb6n7a68pkia100q0jyj2x5bs8hkf0q48rh4dvl3"; + rev = "60a167ad12ce9e4dc9637254f39ae11ab2f22a81"; + sha256 = "1s6n2j56cvrdg130w2iy2wvynzsqgjqcrnra3f39llpgl4vw9spl"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/cec5af50ae7634cc566adfbfdf0f95c3e2951c0c/recipes/git-commit"; @@ -28512,8 +28617,8 @@ src = fetchFromGitHub { owner = "magit"; repo = "git-modes"; - rev = "9f18eca514d242816a4969e86c4cfd2cf4dfe401"; - sha256 = "0k380f9ff15gg724c2spfd9qml97k24bhn3h9ipv1c7rn9qvhdhc"; + rev = "8ca6595b1362d5882d5642e79f7bb2f18f1c8bbe"; + sha256 = "1crpndp5flw16vrbnd24bk3r99s60xa9zc34apkdglg2s3n50wh7"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/4b4e2ddd2a80875afc0fc654052e6cbff2f3777f/recipes/gitattributes-mode"; @@ -28554,8 +28659,8 @@ src = fetchFromGitHub { owner = "magit"; repo = "git-modes"; - rev = "9f18eca514d242816a4969e86c4cfd2cf4dfe401"; - sha256 = "0k380f9ff15gg724c2spfd9qml97k24bhn3h9ipv1c7rn9qvhdhc"; + rev = "8ca6595b1362d5882d5642e79f7bb2f18f1c8bbe"; + sha256 = "1crpndp5flw16vrbnd24bk3r99s60xa9zc34apkdglg2s3n50wh7"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/44a37f59b87f59a587f6681e7aadfabf137c98d7/recipes/gitconfig-mode"; @@ -28764,8 +28869,8 @@ src = fetchFromGitHub { owner = "magit"; repo = "git-modes"; - rev = "9f18eca514d242816a4969e86c4cfd2cf4dfe401"; - sha256 = "0k380f9ff15gg724c2spfd9qml97k24bhn3h9ipv1c7rn9qvhdhc"; + rev = "8ca6595b1362d5882d5642e79f7bb2f18f1c8bbe"; + sha256 = "1crpndp5flw16vrbnd24bk3r99s60xa9zc34apkdglg2s3n50wh7"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/44a37f59b87f59a587f6681e7aadfabf137c98d7/recipes/gitignore-mode"; @@ -28883,22 +28988,22 @@ license = lib.licenses.free; }; }) {}; - glab = callPackage ({ emacs, fetchFromGitLab, fetchurl, lib, melpaBuild }: + glab = callPackage ({ emacs, fetchFromGitHub, fetchurl, ghub, lib, melpaBuild }: melpaBuild { pname = "glab"; - version = "20170924.359"; - src = fetchFromGitLab { - owner = "tarsius"; - repo = "glab"; - rev = "9848182275e0448390ccdd8dcd8e1e3a1853950c"; - sha256 = "1fw1ck85y9r6z331g1wj7rix29fwy6gwbm7vqj3wff0lszy208ba"; + version = "20180218.652"; + src = fetchFromGitHub { + owner = "magit"; + repo = "ghub"; + rev = "bd16d17006488bcbcea32b258752ddf625954c78"; + sha256 = "0fqkl0dhiqq53p51044aw1zx64phdqklz5c0c1kd3vx92j76zsp6"; }; recipeFile = fetchurl { - url = "https://raw.githubusercontent.com/milkypostman/melpa/9375cbae3ffe5bf4ba5606358860050f3005d9b7/recipes/glab"; - sha256 = "0z34kzly39mdqsyqpi3n5m3189g0d7lsvk2ksmh46zdziak715di"; + url = "https://raw.githubusercontent.com/milkypostman/melpa/70a4dbd62fd6ebb4e056d0e97fa1a958437ddc91/recipes/glab"; + sha256 = "0ym8bgym11mdv5bw22lgkcxyqy7qgxxm0yjmrq8qx7i55gqayyb8"; name = "glab"; }; - packageRequires = [ emacs ]; + packageRequires = [ emacs ghub ]; meta = { homepage = "https://melpa.org/#/glab"; license = lib.licenses.free; @@ -29852,12 +29957,12 @@ golint = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "golint"; - version = "20150414.1730"; + version = "20180221.1215"; src = fetchFromGitHub { owner = "golang"; repo = "lint"; - rev = "e14d9b0f1d332b1420c1ffa32562ad2dc84d645d"; - sha256 = "15ynf78v39n71aplrhbqvzfblhndp8cd6lnknm586sdl81wama6p"; + rev = "3ea3fa98a8104b2c8f8a7bffaebc7e54dddf99e1"; + sha256 = "0d2xxvk44i3m4zirl9rzp6dfkf85kssw2kk8wv7h2rqgc3cxi38z"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/34f22d829257456abbc020c006b92da9c7a7860e/recipes/golint"; @@ -29919,8 +30024,8 @@ src = fetchFromGitHub { owner = "google"; repo = "styleguide"; - rev = "cfce3c3a866cfa9ec12fff08d5e575ca875f787b"; - sha256 = "0h35802dp9y29yvrqvkhd2b9x6jkqlwz46k5lgvabsiddqq4x2sn"; + rev = "209d38166b1a56b177de486d894d39ae6822eee6"; + sha256 = "1qssg9sz6b5mx1x6x9ygi5kjmazi1787h8pph990fblh8gvp41wx"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/b4e7f5f641251e17add561991d3bcf1fde23467b/recipes/google-c-style"; @@ -30192,8 +30297,8 @@ src = fetchFromGitHub { owner = "vmware"; repo = "govmomi"; - rev = "d9021ec5f7105414166ac8b535b7de9f1c115cfd"; - sha256 = "02vdb7xp3dgqv83qcandsyq60i8pxvz4yq0d3lk3xl15hi3l75ji"; + rev = "0f82f03a2bbf14037d2331cf02f1d4157bbef6cc"; + sha256 = "19bbx8jmigflyarmydf03ms8lsjwlpn6hl97s63dcw3l4gz4jab2"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/92d6391318021c63b06fe39b0ca38f667bb45ae9/recipes/govc"; @@ -30318,8 +30423,8 @@ src = fetchFromGitHub { owner = "Groovy-Emacs-Modes"; repo = "groovy-emacs-modes"; - rev = "186aae7d8b69f2679876c4606c1df3dd0e07403c"; - sha256 = "124abs1gpxmb76wilszrdkxk4hyszj9gc1x0hvwvn7i40shcr22k"; + rev = "771a9f448593216b8d93deb8cb18465f3551406d"; + sha256 = "1gyj8j02if4hlrj06j5mya1qa8c3vm11y1s4qamsak07r7p26n4s"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3fe318b4e51a280a55c01fa30455e4a180df8bd6/recipes/grails-mode"; @@ -30535,12 +30640,12 @@ green-is-the-new-black-theme = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "green-is-the-new-black-theme"; - version = "20171005.1641"; + version = "20180220.1332"; src = fetchFromGitHub { owner = "fredcamps"; repo = "green-is-the-new-black-emacs"; - rev = "b9cdecd04691311c30c94ad4ec81124e63b9b122"; - sha256 = "124q733rirc8a2d9xfparphcjrrbxhp4wxf070l8hqp3p2764bka"; + rev = "374d14b99f4959fa039c0e1ce8e0e7991b726d98"; + sha256 = "135w5vwbk2468b82v6icc8nh50d9flpi7zd63xch8vpvsri0vpw0"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3e42528d5677fd90515cad47266c07ea3d4363fb/recipes/green-is-the-new-black-theme"; @@ -30719,22 +30824,22 @@ license = lib.licenses.free; }; }) {}; - groovy-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, s }: + groovy-mode = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, s }: melpaBuild { pname = "groovy-mode"; - version = "20180109.718"; + version = "20180214.810"; src = fetchFromGitHub { owner = "Groovy-Emacs-Modes"; repo = "groovy-emacs-modes"; - rev = "186aae7d8b69f2679876c4606c1df3dd0e07403c"; - sha256 = "124abs1gpxmb76wilszrdkxk4hyszj9gc1x0hvwvn7i40shcr22k"; + rev = "771a9f448593216b8d93deb8cb18465f3551406d"; + sha256 = "1gyj8j02if4hlrj06j5mya1qa8c3vm11y1s4qamsak07r7p26n4s"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3fe318b4e51a280a55c01fa30455e4a180df8bd6/recipes/groovy-mode"; sha256 = "1pxw7rdn56klmr6kw21lhzh7zhp338gyf54ypsml64ibzr1x9kal"; name = "groovy-mode"; }; - packageRequires = [ emacs s ]; + packageRequires = [ dash emacs s ]; meta = { homepage = "https://melpa.org/#/groovy-mode"; license = lib.licenses.free; @@ -31100,12 +31205,12 @@ hackernews = callPackage ({ fetchFromGitHub, fetchurl, json ? null, lib, melpaBuild }: melpaBuild { pname = "hackernews"; - version = "20180206.1739"; + version = "20180220.419"; src = fetchFromGitHub { owner = "clarete"; repo = "hackernews.el"; - rev = "087af78262c40fddf9412fa73f7d4d8c6811282a"; - sha256 = "0s8hazfw1nd7sk7nky22d1lq8vqhfba5a2gm4y96s6g31h5wd71d"; + rev = "309c60c974eb5af4554e0675d4285baa77d89e54"; + sha256 = "0gz5f17654bbjwydznpcy6aqzxbv2infbb4wd8zawf9dmb0wxc3q"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/c43a342e47e5ede468bcf51a60d4dea3926f51bd/recipes/hackernews"; @@ -31502,8 +31607,8 @@ src = fetchFromGitHub { owner = "hasky-mode"; repo = "hasky-extensions"; - rev = "d75dc57f4eaeb92785bde6c26c1031710be1cf00"; - sha256 = "135rn33ldrhz3z6fg1rcdaxs1dnahliw782qc4ffxkays186id63"; + rev = "6909022bccb7e5c26d1c4e5fa20cbc6b65c62d69"; + sha256 = "0s5y84ih5hy6m5krmbgbr027xzhw0vybha0pdi0njjyggagirgxd"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/e3f73e3df8476fa231d04211866671dd74911603/recipes/hasky-extensions"; @@ -31523,8 +31628,8 @@ src = fetchFromGitHub { owner = "hasky-mode"; repo = "hasky-stack"; - rev = "7a97d039489ff23b3362b543dea1007357e2ada9"; - sha256 = "1rqj7yypsd25h4x9lx6vkqchq70fwnjs4dpivd7n105h41pz3kiv"; + rev = "b981467f557498de46101ddfcbdfd025e7ec1f8c"; + sha256 = "17vvz8gawih8rksbcn3ndyjqhxaczmjzqm42b1y51j9lky5hmsw0"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/c3faf544872478c3bccf2fe7dc51d406031e4d80/recipes/hasky-stack"; @@ -31707,12 +31812,12 @@ helm = callPackage ({ async, emacs, fetchFromGitHub, fetchurl, helm-core, lib, melpaBuild, popup }: melpaBuild { pname = "helm"; - version = "20180209.2348"; + version = "20180226.417"; src = fetchFromGitHub { owner = "emacs-helm"; repo = "helm"; - rev = "749904ca3e49db17751b906a9781c3da0e4a2b43"; - sha256 = "0zx052y7pxa0zcrgxn2krv6xz4w8l4fcn6wxks64rwkci7n5ywim"; + rev = "07f6dcfabb8904b758c87ea192d9eb44e5d56d35"; + sha256 = "1mzf7lidnz9y6744qh5v66kpmy1lqp7gh2i1ys3cjgfiqk8shy84"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/7e8bccffdf69479892d76b9336a4bec3f35e919d/recipes/helm"; @@ -31938,12 +32043,12 @@ helm-bibtex = callPackage ({ biblio, cl-lib ? null, dash, f, fetchFromGitHub, fetchurl, helm, lib, melpaBuild, parsebib, s }: melpaBuild { pname = "helm-bibtex"; - version = "20180124.338"; + version = "20180222.630"; src = fetchFromGitHub { owner = "tmalsburg"; repo = "helm-bibtex"; - rev = "f5f7d45fb9d636fad1429867ccbc327a446bb350"; - sha256 = "1dpxw8h6aqdajqf929hwmrm2iik7vwhkv05m0vl8vf1i5zbz307i"; + rev = "9002522af7ea199a1453326746ffccbd934d290f"; + sha256 = "1h5czxjxlq16na9rxyg73zpkrvalqyyvdfr7qyknn1avibn2msz7"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/f4118a7721435240cf8489daa4dd39369208855b/recipes/helm-bibtex"; @@ -32316,12 +32421,12 @@ helm-company = callPackage ({ company, fetchFromGitHub, fetchurl, helm, lib, melpaBuild }: melpaBuild { pname = "helm-company"; - version = "20170608.1029"; + version = "20180213.1405"; src = fetchFromGitHub { owner = "Sodel-the-Vociferous"; repo = "helm-company"; - rev = "ae4e1a05455f5eaf07e61b8627934ea1df4eb048"; - sha256 = "05lfqdg5pzwji3j5w1l892qab9nffd3if8ha0545gbxfn94lnx90"; + rev = "acc9c7901e094c1591327a0db1ec7a439f67a84d"; + sha256 = "1d4q9clp0q56br80c21a4wz1gc4jw3mdy97z9mq07x9i8rhlppzs"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/8acf7420f2ac8a36474594bc34316f187b43d771/recipes/helm-company"; @@ -32337,12 +32442,12 @@ helm-core = callPackage ({ async, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "helm-core"; - version = "20180206.10"; + version = "20180226.417"; src = fetchFromGitHub { owner = "emacs-helm"; repo = "helm"; - rev = "749904ca3e49db17751b906a9781c3da0e4a2b43"; - sha256 = "0zx052y7pxa0zcrgxn2krv6xz4w8l4fcn6wxks64rwkci7n5ywim"; + rev = "07f6dcfabb8904b758c87ea192d9eb44e5d56d35"; + sha256 = "1mzf7lidnz9y6744qh5v66kpmy1lqp7gh2i1ys3cjgfiqk8shy84"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/ef7a700c5665e6d72cb4cecf7fb5a2dd43ef9bf7/recipes/helm-core"; @@ -33118,8 +33223,8 @@ src = fetchFromGitHub { owner = "steckerhalter"; repo = "helm-google"; - rev = "6490074b81ecbc6d96df662fa076cf9194158f17"; - sha256 = "0xriaaz3qrxc9j68x0fm55hb8iwag5y03xx179yfa6884jx0iik7"; + rev = "f9b5f0dfd51e16278eba70d8fc94a599563dab61"; + sha256 = "1s2y4fyax4487bz7p16jhgwsjjnzqrjz7pq22p8h23jzcvgh6wzx"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/88ed6db7b53d1ac75c40d12c21de1dec6d717fbe/recipes/helm-google"; @@ -34224,22 +34329,22 @@ license = lib.licenses.free; }; }) {}; - helm-rg = callPackage ({ cl-lib ? null, dash, emacs, fetchFromGitHub, fetchurl, helm, lib, melpaBuild }: + helm-rg = callPackage ({ cl-lib ? null, dash, emacs, fetchFromGitHub, fetchurl, helm, lib, melpaBuild, pcre2el }: melpaBuild { pname = "helm-rg"; - version = "20180205.2231"; + version = "20180220.731"; src = fetchFromGitHub { owner = "cosmicexplorer"; repo = "helm-rg"; - rev = "906aa2af60998b1ac2b37e30d7316f2059c9ea55"; - sha256 = "1yibmlx1na4ff0h9r6j4cqw55z2ggfrzj02b20m2bwm19pyxacm2"; + rev = "775ee76d8b6f45eab1330c714ddac1da20c87fe3"; + sha256 = "11f7m143qnmh2x4987a56ir3acxbp0n54msak3mp5nc1i1h8hq31"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/958fbafdcb214f1ec89fd0d84c6600c89890e0cf/recipes/helm-rg"; sha256 = "0gfq59540q9s6mr04q7dz638zqmqbqmbl1qaczddgmjn4vyjmf7v"; name = "helm-rg"; }; - packageRequires = [ cl-lib dash emacs helm ]; + packageRequires = [ cl-lib dash emacs helm pcre2el ]; meta = { homepage = "https://melpa.org/#/helm-rg"; license = lib.licenses.free; @@ -34315,8 +34420,8 @@ src = fetchFromGitHub { owner = "Andersbakken"; repo = "rtags"; - rev = "2b0c88cc470b06b65232c23df4b6fbfc4b534580"; - sha256 = "047w0khlcawwr9rz7ss52x9jzam4pdqd1cwgx7nqiyv3cd47xfsy"; + rev = "4f27c1cc60742622e6616b579c82b5440ad446d3"; + sha256 = "08310vkd7gyfc9jcis7r5dfdb6spilxw1kf7p8vm078v8hmmjyj0"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3dea16daf0d72188c8b4043534f0833fe9b04e07/recipes/helm-rtags"; @@ -34563,12 +34668,12 @@ helm-swoop = callPackage ({ emacs, fetchFromGitHub, fetchurl, helm, lib, melpaBuild }: melpaBuild { pname = "helm-swoop"; - version = "20170923.2127"; + version = "20180215.354"; src = fetchFromGitHub { owner = "ShingoFukuyama"; repo = "helm-swoop"; - rev = "66a951700e0ef0621cc705791bdd6699488ab121"; - sha256 = "1j1qmbj4g5z891i1xyz8p34mk63ckpl1j80pznbhvb9ffl9aw976"; + rev = "c66336b8245ddc51c4206f19c119f1081920985c"; + sha256 = "0b23j1bkpg4pm310hqdhgnl4mxsj05gpl08b6kb2ja4fzrg6adsk"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/helm-swoop"; @@ -34857,12 +34962,12 @@ helpful = callPackage ({ dash, dash-functional, elisp-refs, emacs, f, fetchFromGitHub, fetchurl, lib, melpaBuild, s, shut-up }: melpaBuild { pname = "helpful"; - version = "20180209.1706"; + version = "20180220.1512"; src = fetchFromGitHub { owner = "Wilfred"; repo = "helpful"; - rev = "874351d34d32f935e3f20485a544681de369c756"; - sha256 = "11mfk5bd1837ln8b2ryi9rksmjsg7lwkylzy8qxb054l5i94vc19"; + rev = "4abe04870467beb8a5a798773e1f145f65298e59"; + sha256 = "1la6im11wmid8k2smsaks1vgw42b4plpy65mr4z22c2bx4q1a24w"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/889d34b654de13bd413d46071a5ff191cbf3d157/recipes/helpful"; @@ -34962,12 +35067,12 @@ hexo = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "hexo"; - version = "20171226.2035"; + version = "20180223.1944"; src = fetchFromGitHub { owner = "kuanyui"; repo = "hexo.el"; - rev = "07c2366d1bdc25e09bebf429050bc0e8a7bb7aa8"; - sha256 = "0xj8jj2mnn2vasiaq7dhx3rd5knqll518ap23wfihnn96cba2rrh"; + rev = "ff21ab2d95e13666f36a243989ffea2027842191"; + sha256 = "1g7i4vlpac7npx8c7f7i9w3f30is7q7zsxp0sqwp7x7rsa5783nn"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/21de1b7db0fa4af4fc0014207d41893a0713d738/recipes/hexo"; @@ -36073,11 +36178,11 @@ howm = callPackage ({ cl-lib ? null, fetchgit, fetchurl, lib, melpaBuild }: melpaBuild { pname = "howm"; - version = "20171225.652"; + version = "20180225.205"; src = fetchgit { url = "https://scm.osdn.net/gitroot/howm/howm.git"; - rev = "1329df206e5de11e78b5064050b5dc6c5b775d9d"; - sha256 = "0k6b03ifz1d5c3055imm6hicvfryss621bcd9i39pdccazpccj67"; + rev = "b932fa603f074049637907d35594f73c3fba45d0"; + sha256 = "189j3061g2s1286434x3zyh6xyjycfrd2sqxx655biicy1xxyk52"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/0099a1f9b0efb3fc3a1420cfe71a647ec6458998/recipes/howm"; @@ -36655,6 +36760,27 @@ license = lib.licenses.free; }; }) {}; + ibuffer-sidebar = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "ibuffer-sidebar"; + version = "20180218.1731"; + src = fetchFromGitHub { + owner = "jojojames"; + repo = "ibuffer-sidebar"; + rev = "7ddf1b5a158b33e9a7d3fe5dad7ea626a464d2bc"; + sha256 = "18rl379bfilzvyi4f4kmy74l4vq2q8hhy5i8kflcgvn0ibipwqjz"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/19c7c36af8e30b9a9ccc4afda2a7b7e39e8d32ff/recipes/ibuffer-sidebar"; + sha256 = "0rzdybkqaf8r6v19isgw4wv0mwdqxvf55gq1ig4shscjc7ys22wp"; + name = "ibuffer-sidebar"; + }; + packageRequires = [ emacs ]; + meta = { + homepage = "https://melpa.org/#/ibuffer-sidebar"; + license = lib.licenses.free; + }; + }) {}; ibuffer-tramp = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "ibuffer-tramp"; @@ -36868,12 +36994,12 @@ ido-completing-read-plus = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, memoize, s }: melpaBuild { pname = "ido-completing-read-plus"; - version = "20180122.1340"; + version = "20180222.1504"; src = fetchFromGitHub { owner = "DarwinAwardWinner"; repo = "ido-completing-read-plus"; - rev = "51861afe385f59f3262ee40acbe772ccb3dd52e7"; - sha256 = "0hspgk8m4acyhpcldwg3xqla9xp3fjrhf37cnjp45j1b3h94x3iy"; + rev = "cb9aa780addb9d9b24a7be777d9fc70807596fa4"; + sha256 = "0pqpjk7gmd28pmlih63c5z8j8h18ph780gba9yd71s2b2vkaw649"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/6104efc035bcf469d133ab9a2caf42c9d4482334/recipes/ido-completing-read+"; @@ -37183,12 +37309,12 @@ ido-ubiquitous = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, ido-completing-read-plus, lib, melpaBuild }: melpaBuild { pname = "ido-ubiquitous"; - version = "20180122.1340"; + version = "20180216.949"; src = fetchFromGitHub { owner = "DarwinAwardWinner"; repo = "ido-completing-read-plus"; - rev = "51861afe385f59f3262ee40acbe772ccb3dd52e7"; - sha256 = "0hspgk8m4acyhpcldwg3xqla9xp3fjrhf37cnjp45j1b3h94x3iy"; + rev = "cb9aa780addb9d9b24a7be777d9fc70807596fa4"; + sha256 = "0pqpjk7gmd28pmlih63c5z8j8h18ph780gba9yd71s2b2vkaw649"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/6104efc035bcf469d133ab9a2caf42c9d4482334/recipes/ido-ubiquitous"; @@ -37831,12 +37957,12 @@ indium = callPackage ({ company, emacs, fetchFromGitHub, fetchurl, js2-mode, lib, melpaBuild, seq, websocket }: melpaBuild { pname = "indium"; - version = "20180131.943"; + version = "20180221.1434"; src = fetchFromGitHub { owner = "NicolasPetton"; repo = "Indium"; - rev = "71299e9bc0d3c75b25ef65e57e9a57c9a17294b4"; - sha256 = "0f9lnsz8fp68qr67l5rq2ippr1fc0rw8nk2f8cm9x90fd82fxwdl"; + rev = "001ef02a2a3ac0803f0f89fb90ea92d7a6e23db2"; + sha256 = "08plikqy6k1drc1m08c9jsln8laq3mzh6056ib64pxip64fwpl62"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/4292058cc6e31cabc0de575134427bce7fcef541/recipes/indium"; @@ -37873,12 +37999,12 @@ inf-clojure = callPackage ({ clojure-mode, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "inf-clojure"; - version = "20180129.1828"; + version = "20180223.1717"; src = fetchFromGitHub { owner = "clojure-emacs"; repo = "inf-clojure"; - rev = "630471b5141cb493305b623e6800c26bc91b3913"; - sha256 = "00jfx1bavyzla7cid9bhw6fcdfqw8bgnwr920kzg3wmfd8nfv5ry"; + rev = "f420c8a4d27c7c2dfea2ebee230d4d1b632a4e3f"; + sha256 = "06l1mqawpaypxmb8mx7l65nzms7amr2wjz2xyhhx2czg7wdhg7sk"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/5d6112e06d1efcb7cb5652b0bec8d282d7f67bd9/recipes/inf-clojure"; @@ -38376,12 +38502,12 @@ intero = callPackage ({ company, emacs, fetchFromGitHub, fetchurl, flycheck, haskell-mode, lib, melpaBuild }: melpaBuild { pname = "intero"; - version = "20180210.937"; + version = "20180221.149"; src = fetchFromGitHub { owner = "commercialhaskell"; repo = "intero"; - rev = "f85e1b47df3bb328be0de34120950cecb3465055"; - sha256 = "1zng4sliygg1l0jamprx9pfs85jiy19gwxpcy2hs3s4hc7yxjdds"; + rev = "752e5ab174bdde87dcadccf478ca43fe328d8aeb"; + sha256 = "0darhg4iwzgfpi62f2l9p83fvl877dw1fml8y4sfn9vrwqnvy93f"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/1b56ca344ad944e03b669a9974e9b734b5b445bb/recipes/intero"; @@ -38985,12 +39111,12 @@ ivy = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "ivy"; - version = "20180211.1010"; + version = "20180225.744"; src = fetchFromGitHub { owner = "abo-abo"; repo = "swiper"; - rev = "cc5197d5de78ba981df54815c8615d795e0ffdc5"; - sha256 = "0c8866mb2ca419b6zh153vp298dxwldj29lbrynwr1jlpjf1dbr5"; + rev = "e4b05e7af0ea80c91ddca6be5eae447a0ba3b8b5"; + sha256 = "00vdb4mwgy6cza3ybjza2xk3rzk4y14d83cnvw58wvnj190gphm3"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/06c24112a5e17c423a4d92607356b25eb90a9a7b/recipes/ivy"; @@ -39006,12 +39132,12 @@ ivy-bibtex = callPackage ({ biblio, cl-lib ? null, dash, f, fetchFromGitHub, fetchurl, lib, melpaBuild, parsebib, s, swiper }: melpaBuild { pname = "ivy-bibtex"; - version = "20180124.338"; + version = "20180222.630"; src = fetchFromGitHub { owner = "tmalsburg"; repo = "helm-bibtex"; - rev = "f5f7d45fb9d636fad1429867ccbc327a446bb350"; - sha256 = "1dpxw8h6aqdajqf929hwmrm2iik7vwhkv05m0vl8vf1i5zbz307i"; + rev = "9002522af7ea199a1453326746ffccbd934d290f"; + sha256 = "1h5czxjxlq16na9rxyg73zpkrvalqyyvdfr7qyknn1avibn2msz7"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/c23c09225c57a9b9abe0a0a770a9184ae2e58f7c/recipes/ivy-bibtex"; @@ -39136,8 +39262,8 @@ src = fetchFromGitHub { owner = "abo-abo"; repo = "swiper"; - rev = "cc5197d5de78ba981df54815c8615d795e0ffdc5"; - sha256 = "0c8866mb2ca419b6zh153vp298dxwldj29lbrynwr1jlpjf1dbr5"; + rev = "e4b05e7af0ea80c91ddca6be5eae447a0ba3b8b5"; + sha256 = "00vdb4mwgy6cza3ybjza2xk3rzk4y14d83cnvw58wvnj190gphm3"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/06c24112a5e17c423a4d92607356b25eb90a9a7b/recipes/ivy-hydra"; @@ -39213,6 +39339,27 @@ license = lib.licenses.free; }; }) {}; + ivy-posframe = callPackage ({ emacs, fetchFromGitHub, fetchurl, ivy, lib, melpaBuild, posframe }: + melpaBuild { + pname = "ivy-posframe"; + version = "20180222.343"; + src = fetchFromGitHub { + owner = "tumashu"; + repo = "ivy-posframe"; + rev = "ddaf875d5f5a8629ba49731c199e0ca57effd3d8"; + sha256 = "0k7mc268lrkkv7ril7z4vnm5z1ha7hl4274av8m2vfsd1szryip2"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/9e7c6f7ca439683abf11dcaa38672ac139c0da4f/recipes/ivy-posframe"; + sha256 = "1sv4xvdvb1g8g5m4f1f159lxbxaz96drsmvhh0k43hp1dh3bhj3b"; + name = "ivy-posframe"; + }; + packageRequires = [ emacs ivy posframe ]; + meta = { + homepage = "https://melpa.org/#/ivy-posframe"; + license = lib.licenses.free; + }; + }) {}; ivy-purpose = callPackage ({ emacs, fetchFromGitHub, fetchurl, ivy, lib, melpaBuild, window-purpose }: melpaBuild { pname = "ivy-purpose"; @@ -39237,12 +39384,12 @@ ivy-rich = callPackage ({ emacs, fetchFromGitHub, fetchurl, ivy, lib, melpaBuild }: melpaBuild { pname = "ivy-rich"; - version = "20180129.2051"; + version = "20180225.1752"; src = fetchFromGitHub { owner = "yevgnen"; repo = "ivy-rich"; - rev = "d5ce9e90003eeac54654d5ce1f19da55448b05f2"; - sha256 = "1jjlrz6af7mkdfg66qsrx6q879l4vxjsljl0fbkld77i9fnm005a"; + rev = "7fc9859802e264afeadb464aa8945f508727e8fa"; + sha256 = "0lw2ywk47cbgdc37m41hm1rin3r79j5w1qrb45mixdw3l5b1vsv2"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/0fc297f4949e8040d1b0b3271c9a70c64887b960/recipes/ivy-rich"; @@ -39262,8 +39409,8 @@ src = fetchFromGitHub { owner = "Andersbakken"; repo = "rtags"; - rev = "2b0c88cc470b06b65232c23df4b6fbfc4b534580"; - sha256 = "047w0khlcawwr9rz7ss52x9jzam4pdqd1cwgx7nqiyv3cd47xfsy"; + rev = "4f27c1cc60742622e6616b579c82b5440ad446d3"; + sha256 = "08310vkd7gyfc9jcis7r5dfdb6spilxw1kf7p8vm078v8hmmjyj0"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3dea16daf0d72188c8b4043534f0833fe9b04e07/recipes/ivy-rtags"; @@ -39823,12 +39970,12 @@ jdee = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, flycheck, lib, melpaBuild, memoize, s }: melpaBuild { pname = "jdee"; - version = "20180109.1233"; + version = "20180218.919"; src = fetchFromGitHub { owner = "jdee-emacs"; repo = "jdee"; - rev = "bffcac3e7a8c57da359185e01ae5a6bdce0ba8e0"; - sha256 = "0bv1pkl6a9a9cs7ka3v17lqb45nx11mg779x7l54rvlkxg4ppchs"; + rev = "6244d4608fe1ec1a1cac7b4b45cf6d1edb06cb91"; + sha256 = "00bscgxv2gmxbmb88p8yhb5ckz73srm251h1vsdfz84cn7vsk1wz"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/a6d2c98f3bf2075e33d95c7befe205df802e798d/recipes/jdee"; @@ -40159,12 +40306,12 @@ jq-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "jq-mode"; - version = "20171116.815"; + version = "20180213.755"; src = fetchFromGitHub { owner = "ljos"; repo = "jq-mode"; - rev = "8384a1926cc22000e5e42f86f28d807fd6149f8e"; - sha256 = "0fa84jln0vddrc218s8scz6hx12ym0wimh6dm58wqxias7gm9fgk"; + rev = "d1fca4613ec90c2c0b8241f4603eba733dd1ac73"; + sha256 = "0sgpl03dqm4lv081l3ff3xp38c39q5i2miyvpsqdjmgnixg3nm8c"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/318705966e26e58f87b53c115c519db95874ac1c/recipes/jq-mode"; @@ -41079,12 +41226,12 @@ kaolin-themes = callPackage ({ autothemer, cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "kaolin-themes"; - version = "20180210.710"; + version = "20180223.1702"; src = fetchFromGitHub { owner = "ogdenwebb"; repo = "emacs-kaolin-themes"; - rev = "3cf42c74e05982f811417a8d5e7b359732462f8e"; - sha256 = "0p32zgmmdnsmvcjnkxfbbqq775n9f29w45q54bhdvw63gicnvdwg"; + rev = "bf301134df90159a8657fe772365fd9c82de977b"; + sha256 = "0gm96xxa2zvmn442cjzqsqhjw6r8fsrxqacphwa19lvmm9csv3wj"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/043a4e3bd5301ef8f4df2cbda0b3f4111eb399e4/recipes/kaolin-themes"; @@ -41482,8 +41629,8 @@ src = fetchFromGitHub { owner = "mrkkrp"; repo = "kill-or-bury-alive"; - rev = "d21aa7a12f1a76d47249db36eb9825242df9d512"; - sha256 = "1m790afdrns8afh7f690slq2gcya5bp7630fxwi8fqp5vil7lswg"; + rev = "0ba8f44efe60058ef66b10a059fd30489b42546f"; + sha256 = "09y6905ig6qphfwjk1xn79sv4qxx75gnrmnwd9i80ig3lfp8ps2r"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/25016ed09b6333bd79b989a8f6b7b03cd92e08b3/recipes/kill-or-bury-alive"; @@ -41587,8 +41734,8 @@ src = fetchFromGitHub { owner = "kivy"; repo = "kivy"; - rev = "1aa4315396c0ee15c282b94f227bbe54b53e7e0a"; - sha256 = "0w856f20brgakxzngvsikaywkhci961vnasnqyn4a4a5913aa8rw"; + rev = "9f64f5e24240cbf7e2cd34315d08131fd31ec822"; + sha256 = "0liyqkwv94wz623ihz5kyzfagdi08qp3q0q2hcvavjyk3j8ih6ll"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/688e2a114073958c413e56e1d117d48db9d16fb8/recipes/kivy-mode"; @@ -41667,12 +41814,12 @@ kodi-remote = callPackage ({ elnode, fetchFromGitHub, fetchurl, json ? null, let-alist, lib, melpaBuild, request }: melpaBuild { pname = "kodi-remote"; - version = "20180205.1242"; + version = "20180223.1905"; src = fetchFromGitHub { owner = "spiderbit"; repo = "kodi-remote.el"; - rev = "4be03d90ac8249ce31df3ef0edb71e0ca11b5ff3"; - sha256 = "19xg7xss7j1b8hq1wk3kvfprn1lsnym59728v144cxc2f801fh17"; + rev = "aa8c8bb8e64f1f61fadeb4e93973b14dfe19e4a9"; + sha256 = "1gsaw4yfv68ilf0z130rf13300lnz1fdgi2x8rm8hc0q0dlsp1a6"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/08f06dd824e67250afafdecc25128ba794ca971f/recipes/kodi-remote"; @@ -41772,12 +41919,12 @@ kotlin-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "kotlin-mode"; - version = "20171009.1301"; + version = "20180219.853"; src = fetchFromGitHub { owner = "Emacs-Kotlin-Mode-Maintainers"; repo = "kotlin-mode"; - rev = "ebcf6f3730f455894ebb7ed8e42950f66e8e1c1d"; - sha256 = "1345ahc8i69sl2d9v03gdgrdcj7qkbzrl0pl957hjn3vbvmhrz00"; + rev = "a2c2628d55c4e8b018ffe9f55ca38d89302a1bbc"; + sha256 = "12zng3rq134f0d49fr2rsf0jgmxl3qc7kkhziy7r27hx6ny9h8z2"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/9f2560e913b215821221c96069a1385fe4e19c3e/recipes/kotlin-mode"; @@ -42170,12 +42317,12 @@ latex-preview-pane = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "latex-preview-pane"; - version = "20151023.1303"; + version = "20180222.951"; src = fetchFromGitHub { owner = "jsinglet"; repo = "latex-preview-pane"; - rev = "1a0539ab70eaf5dd31c2c94773dddd6f437fed41"; - sha256 = "1bvhrh9xfl7p474b8jcczw255d2pjmrz5b60wis0lmmxdljplrfa"; + rev = "e7dbe0df3ca938128ab394cdf04f3e40eb5b139e"; + sha256 = "1i8mc2qdyyg04rm946vqmmw021c4v8aq7yvxsgl53mfbx9snm3dv"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/bb3227f2e35d701915a8d3479d20581dcbe3a778/recipes/latex-preview-pane"; @@ -42338,12 +42485,12 @@ lcr = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "lcr"; - version = "20180202.112"; + version = "20180224.1243"; src = fetchFromGitHub { owner = "jyp"; repo = "lcr"; - rev = "071d23ee5453741a8724d7f8bfa7f5c20612a29d"; - sha256 = "05gvij9lgs9hh04wnxb90zx9ncsdjyp36fjbmrqrq07xbkxaw82a"; + rev = "6caa2bac7056dcf42c4cb88a1d5fbe1c9d71a9b4"; + sha256 = "0xvl0dqxwim6nmm6f9ddyp0r6j1n719zlgm2a3f49dskhnkn798z"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/29374d3da932675b7b3e28ab8906690dad9c9cbe/recipes/lcr"; @@ -42422,12 +42569,12 @@ ledger-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "ledger-mode"; - version = "20180210.1940"; + version = "20180224.1936"; src = fetchFromGitHub { owner = "ledger"; repo = "ledger-mode"; - rev = "980e191e08db0b6719b324b131b3ba042f8487c8"; - sha256 = "0xb5x9wz7bg39x0xhy5fg3k91vdqym63a4r4p3h6n37rg0d0iwcf"; + rev = "3a10229bc1c12f36c9432ec3b459069a07f05498"; + sha256 = "1x0jg0vysab8592882pgbszrshr85ss66s8fsa6mhh61plxd0fw6"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/1549048b6f57fbe9d1f7fcda74b78a7294327b7b/recipes/ledger-mode"; @@ -42776,6 +42923,27 @@ license = lib.licenses.free; }; }) {}; + line-up-words = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "line-up-words"; + version = "20180219.224"; + src = fetchFromGitHub { + owner = "janestreet"; + repo = "line-up-words"; + rev = "b2cedc45295fd27f534f3b025d2ce72041850c2d"; + sha256 = "0f3601k1clflan8h7a2g4l8ag2f5i5f1gh37mg5hrny8b98n009z"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/28ac7764a19fee2e1e2a89d95569815f1940c5e4/recipes/line-up-words"; + sha256 = "0agsrrkwwfmbiy4z3g4hkrpfr3nqgd5lwfn18qrdxynijd5rqs79"; + name = "line-up-words"; + }; + packageRequires = []; + meta = { + homepage = "https://melpa.org/#/line-up-words"; + license = lib.licenses.free; + }; + }) {}; lingr = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "lingr"; @@ -42997,12 +43165,12 @@ lispy = callPackage ({ ace-window, emacs, fetchFromGitHub, fetchurl, hydra, iedit, lib, melpaBuild, swiper, zoutline }: melpaBuild { pname = "lispy"; - version = "20180208.2204"; + version = "20180215.1527"; src = fetchFromGitHub { owner = "abo-abo"; repo = "lispy"; - rev = "9ac289883012a0c973addb0c8fe4db84259a8019"; - sha256 = "0gd9d9qid36vbr23npgnr9356av2mlkf13xcx0gq2xxck2p4gl58"; + rev = "ae975815db5da512ea86c8547e5907cf04af54bc"; + sha256 = "02s5242yc0c93g9wdry75pg3wrf53da9a3hdvm57zg7b1sjw6p4s"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/e23c062ff32d7aeae486c01e29c56a74727dcf1d/recipes/lispy"; @@ -43039,12 +43207,12 @@ lispyville = callPackage ({ cl-lib ? null, emacs, evil, fetchFromGitHub, fetchurl, lib, lispy, melpaBuild }: melpaBuild { pname = "lispyville"; - version = "20180120.1206"; + version = "20180218.1555"; src = fetchFromGitHub { owner = "noctuid"; repo = "lispyville"; - rev = "d9ae0dd5e3e86b5c0ae37bd3b469949b0dc71374"; - sha256 = "0a3l5a836slh99vzwc6a46nc6xj0wjcfj9726rs8haxkav6wzv61"; + rev = "d99f08d5971613bcecdd2768241b9c6d617a24c7"; + sha256 = "12kjh2b9jdwrf6naq6qvskbhlv8xkjsqr1igbldg9mi8qmas60b9"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/b5d96d3603dc328467fcce29d3ac1b0a02833d51/recipes/lispyville"; @@ -43316,8 +43484,8 @@ src = fetchFromGitHub { owner = "donkirkby"; repo = "live-py-plugin"; - rev = "e0a5627e6591e1cbb9f93aabc44adbdc50b346c9"; - sha256 = "0dhm7gdd1smlibj5jmzps97kwkpzcigbdp0l26baa2mkc6155y66"; + rev = "22406984b66201441c7ad5689ab010bdfadd768b"; + sha256 = "0ni1cvrabxiprb4gl5rd5hgwl5csy9q6b0yjd40ffvl1x5lmb0qw"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/c7615237e80b46b5c50cb51a3ed5b07d92566fb7/recipes/live-py-mode"; @@ -43687,12 +43855,12 @@ logview = callPackage ({ datetime, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "logview"; - version = "20180128.1429"; + version = "20180216.1445"; src = fetchFromGitHub { owner = "doublep"; repo = "logview"; - rev = "60b86ec5888d3bbd857f4abb434a6ae3406b7c93"; - sha256 = "0f292yh493lpwllgs9mihfdmp6ian2rqmldfv92qz0jb348khmdn"; + rev = "9ec279d933923dab2d8d1f140adc43073dab6433"; + sha256 = "1qhzs75pxnaksbhczmpdcy2zmrqavlzkzss7ik5nv2wf9vs0sn02"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/1df3c11ed7738f32e6ae457647e62847701c8b19/recipes/logview"; @@ -43918,12 +44086,12 @@ lsp-javacomp = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, lsp-mode, melpaBuild, s }: melpaBuild { pname = "lsp-javacomp"; - version = "20180203.1204"; + version = "20180218.2334"; src = fetchFromGitHub { owner = "tigersoldier"; repo = "lsp-javacomp"; - rev = "57554723983c5d76c21a7a5c16534066de6dcf23"; - sha256 = "0n105j1i8gwayfzwvr9d37b9ra35l9prlgx7vqblvv167q4w9d63"; + rev = "cb080824e1fc08e2724d6ecde7034f1acfd565f0"; + sha256 = "0ihb4bld8pzw2mxfwygxldsv2hclvmzkr7cp8nimzjam1nlgjhic"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/6b8a1c034554579a7e271409fa72020cfe441f68/recipes/lsp-javacomp"; @@ -43960,12 +44128,12 @@ lsp-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, flycheck, lib, melpaBuild }: melpaBuild { pname = "lsp-mode"; - version = "20180210.441"; + version = "20180224.246"; src = fetchFromGitHub { owner = "emacs-lsp"; repo = "lsp-mode"; - rev = "a38ce26c9ebd56a690085d29a80f4494843e53c3"; - sha256 = "0mlnz3aqa40gavb0lr7bzlyzfm58d1c4np546v1401ljdc95fcgi"; + rev = "14d5626f905d2929e4358cbea3e0106b9f3c0454"; + sha256 = "00py4qp1rivr54h033cjnipx7011cqac49v9x86zn2g2hfclhy7n"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/1a7b69312e688211089a23b75910c05efb507e35/recipes/lsp-mode"; @@ -44002,11 +44170,11 @@ lsp-php = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, lsp-mode, melpaBuild }: melpaBuild { pname = "lsp-php"; - version = "20180104.152"; + version = "20180214.624"; src = fetchFromGitHub { owner = "tszg"; repo = "lsp-php"; - rev = "6f332a08c28d2f402a783b91e1846234e55ec130"; + rev = "ff5f5ba417342aa05869a1a9c6a0fc2d42c8acc3"; sha256 = "05rq7sqb6chymzfqvk5xk9bgi7nsdf1ldimams8df9ml6242zjsg"; }; recipeFile = fetchurl { @@ -44044,12 +44212,12 @@ lsp-rust = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, lsp-mode, markdown-mode, melpaBuild, rust-mode }: melpaBuild { pname = "lsp-rust"; - version = "20180126.6"; + version = "20180213.2304"; src = fetchFromGitHub { owner = "emacs-lsp"; repo = "lsp-rust"; - rev = "660dfa99917440acf79e1e2d3ede4d3a90f0d196"; - sha256 = "1drr2wlbgn6zyr15hjgdwldw94ryi1dbazbb44f4h9qakw7nqd2b"; + rev = "b4053425d57101f0c16ee3d4f7e3a3c483205f90"; + sha256 = "037y7ns1p6riyycf65gq6myn921zjc2ga3h804yjx1n11wvrw9al"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/1a7b69312e688211089a23b75910c05efb507e35/recipes/lsp-rust"; @@ -44062,22 +44230,22 @@ license = lib.licenses.free; }; }) {}; - lsp-ui = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, flycheck, lib, lsp-mode, melpaBuild }: + lsp-ui = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, flycheck, lib, lsp-mode, markdown-mode, melpaBuild }: melpaBuild { pname = "lsp-ui"; - version = "20180209.1302"; + version = "20180224.2300"; src = fetchFromGitHub { owner = "emacs-lsp"; repo = "lsp-ui"; - rev = "6a669ca3bb14b48ba61f87e32f3a4eddc95dbf9a"; - sha256 = "0p4lr98asfhz78pj9mq7m7lk7syfz8w16xhrfv012llr8412g8cw"; + rev = "7d73049dc2cf703550decdea42e35920efe7339f"; + sha256 = "0cah4azsgks5qq8iv3g8dv0l18wkc4lca9xr7g79p2vl4z34sgps"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/1e4fa7cdf71f49f6998b26d81de9522248bc58e6/recipes/lsp-ui"; sha256 = "00y5i44yd79z0v00a9lvgixb4mrx9nq5vcgmib70h41ffffaq42j"; name = "lsp-ui"; }; - packageRequires = [ dash emacs flycheck lsp-mode ]; + packageRequires = [ dash emacs flycheck lsp-mode markdown-mode ]; meta = { homepage = "https://melpa.org/#/lsp-ui"; license = lib.licenses.free; @@ -44380,12 +44548,12 @@ magic-filetype = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, s }: melpaBuild { pname = "magic-filetype"; - version = "20161214.1017"; + version = "20180219.752"; src = fetchFromGitHub { owner = "emacs-php"; repo = "magic-filetype.el"; - rev = "9a20137474697063898902b43a40423daa4eb64d"; - sha256 = "1r16qlm2pqcph0zwy3fhzdjywdrfcwvldqk809vbhw71qkq4a54i"; + rev = "019494add5ff02dd36cb3f500142fc51125522cc"; + sha256 = "1hw77d4wgqrms8rvkv3xd50v4y9qjvm7cpz5rkgmvizs34pjqy22"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/eb13cb0dba1696cc51132cd1ff723fa17f892a7c/recipes/magic-filetype"; @@ -44422,12 +44590,12 @@ magit = callPackage ({ async, dash, emacs, fetchFromGitHub, fetchurl, ghub, git-commit, let-alist, lib, magit-popup, melpaBuild, with-editor }: melpaBuild { pname = "magit"; - version = "20180211.700"; + version = "20180224.1651"; src = fetchFromGitHub { owner = "magit"; repo = "magit"; - rev = "10a1f08f39373bfc2ed86858cf02d82bfcdb7be8"; - sha256 = "1bk1a34yi37gsb6n7a68pkia100q0jyj2x5bs8hkf0q48rh4dvl3"; + rev = "60a167ad12ce9e4dc9637254f39ae11ab2f22a81"; + sha256 = "1s6n2j56cvrdg130w2iy2wvynzsqgjqcrnra3f39llpgl4vw9spl"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/b0a9a6277974a7a38c0c46d9921b54747a85501a/recipes/magit"; @@ -44578,12 +44746,12 @@ magit-imerge = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, magit, melpaBuild }: melpaBuild { pname = "magit-imerge"; - version = "20180120.1554"; + version = "20180212.1648"; src = fetchFromGitHub { owner = "magit"; repo = "magit-imerge"; - rev = "1969c445d16e5c59db9548a61a5fe5f0b7448cd3"; - sha256 = "0yiqjaxnrb46z38bbcg1dlswi6sp8994hcmbnp31xf27m29vr2fx"; + rev = "79a2fccc460695df5547204ad6c05529868ba1fd"; + sha256 = "1ks17wl0h4a5rhwfzq47rf60192rxyvkwqhnp3fg9sa85b0nqc3i"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/e78a5c27eedfc9b1d79e37e8d333c5d253f31a3c/recipes/magit-imerge"; @@ -44641,12 +44809,12 @@ magit-popup = callPackage ({ async, dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "magit-popup"; - version = "20180119.111"; + version = "20180217.910"; src = fetchFromGitHub { owner = "magit"; repo = "magit-popup"; - rev = "ab75385a1fb8c0fba0769d448b13ba8324835261"; - sha256 = "0ky4l3k3camh1paa5ap9frr9hcadj7nj40l3imiiqfcvgyl8ijp6"; + rev = "48cf02b8e4d7d4a83bc22cacd64cbf4e6a266aa2"; + sha256 = "0dnfa3djgnfgig279v46xl4gz3lzjmc48nq27gdlksnkp1mwnn3j"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/0263ca6aea7bf6eae26a637454affbda6bd106df/recipes/magit-popup"; @@ -44767,12 +44935,12 @@ magithub = callPackage ({ emacs, fetchFromGitHub, fetchurl, ghub-plus, git-commit, lib, magit, markdown-mode, melpaBuild, s }: melpaBuild { pname = "magithub"; - version = "20180209.1711"; + version = "20180225.529"; src = fetchFromGitHub { owner = "vermiculus"; repo = "magithub"; - rev = "eb8a794df0db2e7edea1106a87bf03f94ec7e192"; - sha256 = "1q7s822ygqc8rz0b1fqgwdjnj5l0fhnqahlnf02aqz5by47sgaqg"; + rev = "8d8d136ae4c380f004354675519f4016c735d78c"; + sha256 = "1dnz8rz78wfvpjz652hs4jh90pkkgiak4vp9fzf2kx1j4c9skp97"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/magithub"; @@ -45103,12 +45271,12 @@ mandoku = callPackage ({ fetchFromGitHub, fetchurl, git, github-clone, lib, magit, melpaBuild, org }: melpaBuild { pname = "mandoku"; - version = "20180207.2320"; + version = "20180223.2121"; src = fetchFromGitHub { owner = "mandoku"; repo = "mandoku"; - rev = "36fed6ea0ae45b36ef5618d5bd29f4a43c0e2c6d"; - sha256 = "1qsygc90sclk5r1qxsiszi72sg6ryhiw39vf99ixi0pxayljk8px"; + rev = "a07d1cd310f59b28125717620dff5cd3ff674ab1"; + sha256 = "1rpn1c66yi6rdn7f2dgdspbwgdyidvpdwshh52dydgwy4z08lpfs"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/1aac4ae2c908de2c44624fb22a3f5ccf0b7a4912/recipes/mandoku"; @@ -45587,8 +45755,8 @@ sha256 = "1spyfnkw6j0v947m6yj6mv6ni1za0a9m9iycpjycpcb42q7d9rlg"; }; recipeFile = fetchurl { - url = "https://raw.githubusercontent.com/milkypostman/melpa/caaa21f235c4864f6008fb454d0a970a2fd22a86/recipes/matlab-mode"; - sha256 = "128v4rwc99dwyfgi5crbr5649fz4l7dwh4lid8w2mwpknyxaxy28"; + url = "https://raw.githubusercontent.com/milkypostman/melpa/6f78cff288077e04f8c9e4c2e5be9f3c33d8ff49/recipes/matlab-mode"; + sha256 = "1q3sdmahf915ix4lrv65cxsfh6hrs91c8pmyixbqmbhifqi33d0q"; name = "matlab-mode"; }; packageRequires = []; @@ -45831,12 +45999,12 @@ meghanada = callPackage ({ company, emacs, fetchFromGitHub, fetchurl, flycheck, lib, melpaBuild, yasnippet }: melpaBuild { pname = "meghanada"; - version = "20171230.802"; + version = "20180218.538"; src = fetchFromGitHub { owner = "mopemope"; repo = "meghanada-emacs"; - rev = "98ad6a5361c725319a355522d2d1ba0e0fbb7cde"; - sha256 = "06iryz4dbldc9vxy67g977hih8r1bfvjld53lvwnjsc7r3x9i07q"; + rev = "ca20c57c9c389d4dd9fe88d9a3da33d5af78e4d0"; + sha256 = "1k9dpvvz7qcscq9z76xvsas96lj0xsnp725z3w97sahqsi0sdxq8"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/4c75c69b2f00be9a93144f632738272c1e375785/recipes/meghanada"; @@ -46694,8 +46862,8 @@ src = fetchFromGitHub { owner = "mrkkrp"; repo = "mmt"; - rev = "b8cc8d29e185c15a1e43ecc2a78e36a6d2f86b8f"; - sha256 = "17v26116g05py2yd24a5rjlr2lbdacahglxar10k5291v9i4msdw"; + rev = "e860009ce531ee05d2902309db5f804326596b45"; + sha256 = "1l0jh657ndypi9n7dxac8hqc61fxp9c10li3w23c1r9pad4zisy5"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/d1137bb53ecd92b1a8537abcd2635602c5ab3277/recipes/mmt"; @@ -46841,8 +47009,8 @@ src = fetchFromGitHub { owner = "mrkkrp"; repo = "modalka"; - rev = "e69ec8fa01e86cb789f7f2b27b6d5a47e1ca3069"; - sha256 = "10yn56vamcfblilsnfqfagssr4060gr7qbpnqa2fjqv1l8fg6jrf"; + rev = "297d5e66628bbd788f8673656ab5f2da29f7c40b"; + sha256 = "1agb500fc3cmhfq423bii7mz83hwnfas5xs6c1qjv3d89v7wxp69"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/fa0a02da851a603b81e183f461da55bf4c71f0e9/recipes/modalka"; @@ -47151,12 +47319,12 @@ monotropic-theme = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "monotropic-theme"; - version = "20180205.2000"; + version = "20180218.357"; src = fetchFromGitHub { owner = "caffo"; repo = "monotropic-theme"; - rev = "a5dc696e79115f96a2482ba2e01f0569c5e4c4be"; - sha256 = "17985wdlgz4d45jznl9df34826mm5xc8h5xcar70rdrw4gqp4ccy"; + rev = "b46e94a712e01cebe69a6f7d950e91d7c7dd1b66"; + sha256 = "0lmyfqi6c5f2cr9ha1l2qnc4ayigb1zj9gz8xi5xxadhad3zymwh"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/38222d109ece0030b0bfafb242aa100694b2bfcf/recipes/monotropic-theme"; @@ -48074,12 +48242,12 @@ mwim = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "mwim"; - version = "20180116.740"; + version = "20180214.837"; src = fetchFromGitHub { owner = "alezost"; repo = "mwim.el"; - rev = "a27879c4d0ef1d3f8494efa18490dd17d707375b"; - sha256 = "0v2qar878z6imh6ih4qxwc7jmwga8l6c626zrzz81l60b675li8x"; + rev = "508efa3a616d4b371039053b1fa80b057422196c"; + sha256 = "067m1r19fc4zhgwc7gwb6khbh3sz74li2fcxfj42d9sx1dqhy218"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/b7e1aa2fa1294b27ed7b6c5bdd5844fa5c37df72/recipes/mwim"; @@ -48326,12 +48494,12 @@ nameless = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "nameless"; - version = "20161012.1214"; + version = "20180215.1421"; src = fetchFromGitHub { owner = "Malabarba"; repo = "Nameless"; - rev = "108f16e743aecd35401c0e914c896572cf1d5082"; - sha256 = "110bxdn2sqxlxqffaxp0yc6g2hglbv91az00mmgc01n6hjxcrc3h"; + rev = "79d7ba8e9b8f3093e93172bdb4c5a4d31b0fa3e0"; + sha256 = "11xghz03csj5w3qfbjyr48liaxr08gl6gy73hmmrq2bl57six5n0"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/8e4ee4dae5f32a8d445dc0cc2455c1f7075c9b3d/recipes/nameless"; @@ -48913,12 +49081,12 @@ ng2-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, typescript-mode }: melpaBuild { pname = "ng2-mode"; - version = "20180206.1128"; + version = "20180216.743"; src = fetchFromGitHub { owner = "AdamNiederer"; repo = "ng2-mode"; - rev = "00822c2e43ff4793cf030fbbd67f83cfdb689b3a"; - sha256 = "19qbs0c0q98rp506a8sj7wkigrk8xzv0s87q9bcl5zxk9jx6m304"; + rev = "d41ed14f276f1f08fb7eaacc863f471654e2c2fa"; + sha256 = "0rys2gnbw9d32i1gqqf46mbf36x2s9lz7v144yw901b2i8p6c5ja"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/a856ecd8aca2d9232bb20fa7019de9e1dbbb19f4/recipes/ng2-mode"; @@ -49017,12 +49185,12 @@ nim-mode = callPackage ({ commenter, emacs, epc, fetchFromGitHub, fetchurl, flycheck-nimsuggest, let-alist, lib, melpaBuild }: melpaBuild { pname = "nim-mode"; - version = "20171119.1027"; + version = "20180212.1040"; src = fetchFromGitHub { owner = "nim-lang"; repo = "nim-mode"; - rev = "91450d3117a4dec975d913b58f1ece6808e5c2ba"; - sha256 = "01h0wyjh8s91s1wyy6drwnvc3gw7a905xg85ikv7ddywi920c169"; + rev = "bff7065f6d2419ec517d247f0f3aaf935820064e"; + sha256 = "0iqsm843msw41jxhfi7dbsj6x4qanvd84xhg2j6wl6ncabdmwnjm"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/dc2ccb5f24b9d55c77eaa7952a9e6a2e0ed7be24/recipes/nim-mode"; @@ -49038,12 +49206,12 @@ nimbus-theme = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "nimbus-theme"; - version = "20180129.536"; + version = "20180220.440"; src = fetchFromGitHub { owner = "m-cat"; repo = "nimbus-theme"; - rev = "22c4a1cf1ce8686c01a341477502d2676829699b"; - sha256 = "1sf8ijk08kivfj0dxgmx73l10hkd921z766z5x4w1p3axwc8w9j1"; + rev = "451a570d656e18e66d58182577685da0e43c87a3"; + sha256 = "02bvvrvbfg7cgbd83y7544ra5a0hfrk8kh938hwygq991krc2zhp"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/fc0e6b456b76e2379c64a86ad844362c58146dc6/recipes/nimbus-theme"; @@ -49080,12 +49248,12 @@ nix-buffer = callPackage ({ emacs, f, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "nix-buffer"; - version = "20170809.1128"; + version = "20180212.718"; src = fetchFromGitHub { owner = "shlevy"; repo = "nix-buffer"; - rev = "b922497ea0af39fdf1a7e856d0cd2ce81d98d76f"; - sha256 = "1db0cjsq99b1z6786g3j8y39vj3gga7x6yzkilxdp7z6scs1qdwr"; + rev = "db57cda36e7477bdc7ef5a136357b971b1d4d099"; + sha256 = "0b01b4l9c70sad5r5py5hvg7s6k6idwwp0pv3rn8rj0fq5wlyixj"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/08b978724ff26b3ea7a134d307d888c80e2a92a9/recipes/nix-buffer"; @@ -49101,12 +49269,12 @@ nix-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "nix-mode"; - version = "20180126.1935"; + version = "20180215.1331"; src = fetchFromGitHub { owner = "NixOS"; repo = "nix-mode"; - rev = "664fa51cfa9d8e4c39f2086ad1b6b6fdc1e8fbd7"; - sha256 = "0nnxd2lis4qx2zakfcy5ypvlp1nrw70dq2jcf0gldg0qmr1dhlgk"; + rev = "0ac0271f6c8acdbfddfdbb1211a1972ae562ec17"; + sha256 = "157vy4xkvaqd76km47sh41wykbjmfrzvg40jxgppnalq9pjxfinp"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/e1870d786dbfac3b14386c8030e06f2d13ab9da6/recipes/nix-mode"; @@ -49458,12 +49626,12 @@ nordless-theme = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "nordless-theme"; - version = "20180204.48"; + version = "20180215.454"; src = fetchFromGitHub { owner = "lthms"; repo = "nordless-theme.el"; - rev = "3fb123eaaf7f38d024effdda4b3e88cc66e67300"; - sha256 = "0i5b7qg97qcgvhk8vv7x5xpwps06q140jndkz4i2rakg5hr3z98g"; + rev = "aeecad74c19121fa2f68dfd85efb9a4f34e8a911"; + sha256 = "1ypwh4kz9kjxikmhgh8aac8ihnyinijsvsjwa8s4lc1j4nfzffih"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3de9da6cb8c1a75ff1d41a69e156c21be00713b6/recipes/nordless-theme"; @@ -49538,12 +49706,12 @@ nov = callPackage ({ dash, emacs, esxml, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "nov"; - version = "20180115.1407"; + version = "20180215.1206"; src = fetchFromGitHub { owner = "wasamasa"; repo = "nov.el"; - rev = "4ef20ebb587ffb0ab73c85ad5748d41af1071596"; - sha256 = "03s0qjvwk1f7y3i4wh2p5y3z4hdv00adgz8za3vphzc0q8i1kjzb"; + rev = "b0eab94b84464aa4508ccfee59af5b8df49666a2"; + sha256 = "0r4wy99kpdzs0c8b6ini8k0xixjrb48bbml3nz3sfxy3w7kb4kyb"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/cf543955ba2d5d0074fa2a5ba176f9415f6e006d/recipes/nov"; @@ -49664,12 +49832,12 @@ nu-mode = callPackage ({ ace-window, avy, fetchFromGitHub, fetchurl, lib, melpaBuild, transpose-frame, undo-tree, which-key }: melpaBuild { pname = "nu-mode"; - version = "20180104.1243"; + version = "20180220.1315"; src = fetchFromGitHub { owner = "pyluyten"; repo = "emacs-nu"; - rev = "91056b70667036bc78d6c8585cf0bc8fe7ba21c0"; - sha256 = "0pf8ng0r829lrbqjz61wjdag9cb27cx0cj2idgpy92hfiy9s6saa"; + rev = "9c9fcb1395a3bd317cb5433c6c4defaa9bb3c7dd"; + sha256 = "0snynh8mk1ivdphrrpznh16szw2jcagxl7w056wv7j2zmb17agcx"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/230d5f8fdd965a24b8ff3cc94acf378d04815fca/recipes/nu-mode"; @@ -50219,8 +50387,8 @@ src = fetchFromGitHub { owner = "juergenhoetzel"; repo = "ob-fsharp"; - rev = "65ec2b626ac55313d8a04e746940370f615fed1e"; - sha256 = "12k6z3zsh8av3avhl2a62v475bpxpcdy56v8i248bv1wgd3ma2mi"; + rev = "0b2fdd9bb4f38af8b5cf4914627af52f5b43d9f7"; + sha256 = "1z1m2dqnvyyv9ff289p8x1hajnz9n0mmfkrkyl1zvipaqd9mgljw"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/89bc8c5fe6db0573109e82b3d1350d33d6d8aff5/recipes/ob-fsharp"; @@ -50299,12 +50467,12 @@ ob-ipython = callPackage ({ dash, dash-functional, emacs, f, fetchFromGitHub, fetchurl, lib, melpaBuild, s }: melpaBuild { pname = "ob-ipython"; - version = "20180113.929"; + version = "20180224.153"; src = fetchFromGitHub { owner = "gregsexton"; repo = "ob-ipython"; - rev = "75b84cb1ca09dfa84113fa0790e182299b72244c"; - sha256 = "05yhrivsxf8qvnhvsdb5kdq1a881l5c7d3apz1sk2mdxw89vcv7k"; + rev = "7147455230841744fb5b95dcbe03320313a77124"; + sha256 = "1a10fc2jk37ni5sjjvf87s5nyaz2a6h2mlj5dxh4dhv5sd3bb85p"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/557c36e86844c211f2d2ee097ce51ee9db92ea8b/recipes/ob-ipython"; @@ -50828,8 +50996,8 @@ src = fetchFromGitHub { owner = "OCamlPro"; repo = "ocp-indent"; - rev = "764d8dfa931f2336fa9f469aea7d38bcb4990723"; - sha256 = "1h0rgcifhzqxb7glax7b7whxkcrrd1mmvsdn7z2xgwjla3qmx4w2"; + rev = "9bbd079199ef7308d4fa3cf0fafd2d7d8b4bf2d4"; + sha256 = "117xwqxnmg2f2np1zqyc8hhnxmrrd2gcixqclb5lkwk68kisjmi5"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/e1af061328b15360ed25a232cc6b8fbce4a7b098/recipes/ocp-indent"; @@ -51652,12 +51820,12 @@ org-brain = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, org }: melpaBuild { pname = "org-brain"; - version = "20180209.534"; + version = "20180223.1455"; src = fetchFromGitHub { owner = "Kungsgeten"; repo = "org-brain"; - rev = "7f96d1417fa3b676d402524b2de92447174cc101"; - sha256 = "1lrvi15qzqbdgkar2mxzsjhna8wbhr95hnym93rwvksgmn8dgivg"; + rev = "22eacef9fd0e66508888016b5d33b6ce85727573"; + sha256 = "16mz2vv3p4x1x400ylx5321svpczsydzkkb93j21cmk3b6a1jibg"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/47480fbae06e4110d50bc89db7df05fa80afc7d3/recipes/org-brain"; @@ -52386,12 +52554,12 @@ org-mime = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "org-mime"; - version = "20171105.1440"; + version = "20180220.1906"; src = fetchFromGitHub { owner = "org-mime"; repo = "org-mime"; - rev = "64a3f56651369b2a8b0a601abea1cf1216db2ded"; - sha256 = "0jvknbiilik3dwkz1kpjf7ac1fqkdh74pljzpyxxyg3slqha0d50"; + rev = "0752659f7a19cead182584fabc9544464f69b83e"; + sha256 = "06lay5w03ah3w156spgh4bv2ma4x42pyhr3glfxw7vplfr5klvfz"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/521678fa13884dae69c2b4b7a2af718b2eea4b28/recipes/org-mime"; @@ -52449,12 +52617,12 @@ org-mru-clock = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "org-mru-clock"; - version = "20171219.314"; + version = "20180219.359"; src = fetchFromGitHub { owner = "unhammer"; repo = "org-mru-clock"; - rev = "ccf477735d76c078b44bba7bff12e7e30e66bdb3"; - sha256 = "17dxdghnh3h24584pa374pmz0a7qr13p0a4rfsndns9xv8wfzbic"; + rev = "0894a5dad148524f6e31cd089eda2879fc85fbe4"; + sha256 = "0ya3f86kryaminjja1868wh6db5hsnczhqldq3hgh7bvlnnsvp6s"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/b36bf1c1faa4d7e38254416a293e56af96214136/recipes/org-mru-clock"; @@ -52512,12 +52680,12 @@ org-noter = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, org }: melpaBuild { pname = "org-noter"; - version = "20180210.1836"; + version = "20180225.1352"; src = fetchFromGitHub { owner = "weirdNox"; repo = "org-noter"; - rev = "8841704afc019c0ebd66795343562be8b8fa77f1"; - sha256 = "1ba2l0nyxxg0x9kn53xif7nzn4di0dp3dkni6qihns9v0n8vl56s"; + rev = "6ef0f4d1ee13a91da837a940f7c6633e4f5d8d65"; + sha256 = "06c35lmy2852n1ss7ry2x1m05s7indb3x5zy6lii64bmqcqr1w7v"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/4a2bc0d95dc2744277d6acbba1f7483b4c14d75c/recipes/org-noter"; @@ -52666,12 +52834,12 @@ org-pdfview = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, org, pdf-tools }: melpaBuild { pname = "org-pdfview"; - version = "20180102.2349"; + version = "20180225.206"; src = fetchFromGitHub { owner = "markus1189"; repo = "org-pdfview"; - rev = "645f451df82fb5ebdf42b2c208711d307781062d"; - sha256 = "1iq90f821iycqs1qff1m2vjl1czri01c484gcnn50wnf7mdfynhk"; + rev = "09ef4bf8ff8319c1ac78046c7e6b89f6a0beb82c"; + sha256 = "15zxdq6f6w3l8pzg3b58cj37z61dx106jwslpqni71m8wczdqkz1"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/org-pdfview"; @@ -52924,12 +53092,12 @@ org-ref = callPackage ({ dash, emacs, f, fetchFromGitHub, fetchurl, helm, helm-bibtex, hydra, ivy, key-chord, lib, melpaBuild, pdf-tools, s }: melpaBuild { pname = "org-ref"; - version = "20180207.1846"; + version = "20180224.1445"; src = fetchFromGitHub { owner = "jkitchin"; repo = "org-ref"; - rev = "e828a32d00b24af2c6c657481c3ad163de6c8e02"; - sha256 = "0inmayxdhfdh5lnjzqxkm65f160p2inc0mz7m254wm81z50033km"; + rev = "8e469035a73e3658d818d1665bcfdfb108d7ae41"; + sha256 = "1ff901w7qrlgqzxn0cfnw3a6nqs3nip6vja11ikj9lykrh1pkf44"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/550e4dcef2f74fbd96474561c1cb6c4fd80091fe/recipes/org-ref"; @@ -52995,6 +53163,27 @@ license = lib.licenses.free; }; }) {}; + org-rich-yank = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "org-rich-yank"; + version = "20180218.156"; + src = fetchFromGitHub { + owner = "unhammer"; + repo = "org-rich-yank"; + rev = "ffa90b29604e27a60ad341c06d0e43769af19715"; + sha256 = "1z9137nirbaydqpw5b7ii3qnpn09v1kiqnyxsxkgc0q3arb1m1f6"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/1261823d88459b6ac42d6c55c157a326173663df/recipes/org-rich-yank"; + sha256 = "1v0sc90g5sl6b9ylxbk2y8s3pvxkf4v7k2rkzpgpbp4nrq0miy4y"; + name = "org-rich-yank"; + }; + packageRequires = [ emacs ]; + meta = { + homepage = "https://melpa.org/#/org-rich-yank"; + license = lib.licenses.free; + }; + }) {}; org-rtm = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, rtm }: melpaBuild { pname = "org-rtm"; @@ -53124,12 +53313,12 @@ org-sync = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, org }: melpaBuild { pname = "org-sync"; - version = "20150817.754"; + version = "20180221.1127"; src = fetchFromGitHub { owner = "arbox"; repo = "org-sync"; - rev = "7f02167ef805cd76def274be4d3bd0c6e41d9af8"; - sha256 = "18v56lrscpzxq5prigd1pjkx990xf57pzf1d2yj6r1grqfz235yy"; + rev = "095335063b306871970f981898a220f62ad0ae4e"; + sha256 = "0p4xmlhv9xsa111yrgmfl5laznmj9ijpsifqcxmplrf5ckzqbdkn"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/923ddbaf1a158caac5e666a396a8dc66969d204a/recipes/org-sync"; @@ -53397,12 +53586,12 @@ org-wc = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "org-wc"; - version = "20170727.1911"; + version = "20180124.229"; src = fetchFromGitHub { owner = "tesujimath"; repo = "org-wc"; - rev = "d294ad7117c150445e6166fc0d88c14a8386f34e"; - sha256 = "1ijmdir2csvrmfqh9b5h57x0v3jcla5xzjamb4c7hhd87a6qd9wl"; + rev = "6ff202a4612fe65b4e96bd551893fe8df67b0f51"; + sha256 = "1yqiqscj7cmnqd4s1lgbf7jbhcqlf3bwr52sabz7mqfs4iwdryhl"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/852e0a5cee285cc9b5e2cd9e18061fc0fe91d5a6/recipes/org-wc"; @@ -53436,22 +53625,22 @@ license = lib.licenses.free; }; }) {}; - org-wild-notifier = callPackage ({ alert, dash, fetchFromGitHub, fetchurl, lib, melpaBuild, org }: + org-wild-notifier = callPackage ({ alert, dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "org-wild-notifier"; - version = "20180125.721"; + version = "20180221.2025"; src = fetchFromGitHub { owner = "akhramov"; repo = "org-wild-notifier.el"; - rev = "3f87465d6c4ea63010b9beab8de3cfa54429bce8"; - sha256 = "1vxjlfdkl6yxgh50nmz87qsyga71wf8cmrggnp6bkljak88vgz98"; + rev = "d0df145d9bbb72b2c315b7d8007cb6a59fea2095"; + sha256 = "1xcnb5x539776b6ljd9qyl9jadp2r4qg805m4m8yfz9sk00dv7yl"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/114552a24f73f13b253e3db4885039b680f6ef33/recipes/org-wild-notifier"; sha256 = "1lmpa614jnkpmfg3m1d2wjn9w0zig3gwd02n3dyjn23n71fiyhkp"; name = "org-wild-notifier"; }; - packageRequires = [ alert dash org ]; + packageRequires = [ alert dash emacs ]; meta = { homepage = "https://melpa.org/#/org-wild-notifier"; license = lib.licenses.free; @@ -53658,12 +53847,12 @@ orgit = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, magit, melpaBuild, org }: melpaBuild { pname = "orgit"; - version = "20170731.1003"; + version = "20180217.1320"; src = fetchFromGitHub { owner = "magit"; repo = "orgit"; - rev = "022687eb02f0bf0d0151d0ad917b165bfef2d663"; - sha256 = "1cddyns82a06ydbw8rhxzghkjav5vxmmc671pdnai50mql3cx9kf"; + rev = "976f3c7d25ad92c57341b52dad9af89b49c37f0c"; + sha256 = "0m8mghh0iydbvlsrg0zd2xajfhdxgxk79dm4gwircrh6zv8194ax"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/73b5f7c44c90540e4cbdc003d9881f0ac22cc7bc/recipes/orgit"; @@ -54204,12 +54393,12 @@ overseer = callPackage ({ dash, emacs, f, fetchFromGitHub, fetchurl, lib, melpaBuild, pkg-info }: melpaBuild { pname = "overseer"; - version = "20170207.2241"; + version = "20180225.2219"; src = fetchFromGitHub { owner = "tonini"; repo = "overseer.el"; - rev = "6be1f2a4df1b7a20298865b85502ee89e327898d"; - sha256 = "0ipq5gflymvznb8xzfl524l09sj90787bzga9ymjjpc4rn9zmqlb"; + rev = "02d49f582e80e36b4334c9187801c5ecfb027789"; + sha256 = "0q4ai7ividy8xv09s342y49s97ismhfdfsjk70zif60fp0ajfzfn"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/overseer"; @@ -54372,12 +54561,12 @@ ox-hugo = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, org }: melpaBuild { pname = "ox-hugo"; - version = "20180211.2258"; + version = "20180222.1537"; src = fetchFromGitHub { owner = "kaushalmodi"; repo = "ox-hugo"; - rev = "a8ae44e692f30fa7d0c76c21ad2dd6ebf65da700"; - sha256 = "0856n634k43ingr7smcwvjjzd9h96mvh0d767q7qcg6h2f5lmgg7"; + rev = "d53acbb3f8557583a1a03e92ec7626ccc63f5264"; + sha256 = "0p0a0qfsfg548bymvy57frj9yg5bzbp9r70l31p86q2x3dyjgiyi"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/1e1240bb7b5bb8773f804b987901566a20e3e8a9/recipes/ox-hugo"; @@ -54603,12 +54792,12 @@ ox-rst = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, org }: melpaBuild { pname = "ox-rst"; - version = "20180115.405"; + version = "20180222.533"; src = fetchFromGitHub { owner = "msnoigrs"; repo = "ox-rst"; - rev = "58715dcba3922b5c7fc8ed5e7915277a9732fae3"; - sha256 = "1267rfj1rq04g9ngw0yglsdjma6bb04j3fc8afwsjixnbqv618kj"; + rev = "313640ac945ec63b7de37fe58d4e71098c2fa4d8"; + sha256 = "0frxwb5mi4gzv2qfqjvw10xl2vnxkra8p73hp6hx7dawbgxb56j4"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/85770d6e235217e98dda9d8b9f027a4ba3ebba96/recipes/ox-rst"; @@ -55212,12 +55401,12 @@ paperless = callPackage ({ cl-lib ? null, emacs, f, fetchFromGitHub, fetchurl, lib, melpaBuild, s }: melpaBuild { pname = "paperless"; - version = "20170213.503"; + version = "20180224.445"; src = fetchFromGitHub { owner = "atgreen"; repo = "paperless"; - rev = "4e8c5d147db5c8ef0a3914e95b4030b28d29c6bb"; - sha256 = "1lnxbn6mwbpfsn8qf8rdn1v7f00jjsk0h1bn4syvzik37x51f2hh"; + rev = "b3b6c05da393f6b1292a3d5937bc4499baabd0b6"; + sha256 = "1b2gm823qd6bllgp9qg2vgskzg4rpdvh8bgic8708hkq6lwpdv70"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/921ba9059183a57e08f9c79af2b28bb77a210508/recipes/paperless"; @@ -55233,12 +55422,12 @@ paradox = callPackage ({ emacs, fetchFromGitHub, fetchurl, hydra, let-alist, lib, melpaBuild, seq, spinner }: melpaBuild { pname = "paradox"; - version = "20161117.502"; + version = "20180216.334"; src = fetchFromGitHub { owner = "Malabarba"; repo = "paradox"; - rev = "dfdfbec8b4a3b71966c134f00c3f5edfa87b6245"; - sha256 = "1l0rs49lbclq4ayhnx6vi6bxn37a0h2ylk73fjcbar2lbr1dhf9r"; + rev = "e5dd26f67ba8fa8ab1631a00ddea4117805b3fd0"; + sha256 = "09x8glw949hivbzikki5blgjkzyws69hck501ym99663k4irdir1"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/1e6aed365c42987d64d0cd9a8a6178339b1b39e8/recipes/paradox"; @@ -55378,12 +55567,12 @@ parinfer = callPackage ({ cl-lib ? null, dash, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "parinfer"; - version = "20180208.1751"; + version = "20180214.1040"; src = fetchFromGitHub { owner = "DogLooksGood"; repo = "parinfer-mode"; - rev = "4e0d585e85a0e27c7703dc6c6edbadc1b4ce1ce0"; - sha256 = "0cq1jkizivjkr0mq0fmv0i9vp01g00w0l500s8r25v6npzjmgq6j"; + rev = "05f554bb5633d48e1ffb053aa3cca462c52600cf"; + sha256 = "1dxvwc48z4z23pl317pkcrnlpwpyw1qyggzn89xcv7p3abyqqhpz"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/470ab2b5cceef23692523b4668b15a0775a0a5ba/recipes/parinfer"; @@ -55592,8 +55781,8 @@ src = fetchFromGitHub { owner = "zx2c4"; repo = "password-store"; - rev = "ffef92ee0ed10551b20521f2d6e5637c8f9da798"; - sha256 = "12j2fjrhxpgha1ay0r4c5cjc6d16s350iclyrvcma35y5dqih2n9"; + rev = "fab65bda88ea979dbbc49f3d856a1d14ee4f1296"; + sha256 = "0yicj227h21lqa97kcaa1pw4xyaakjqh9ynr2pynixkafalfkxhl"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/207f8ec84572176749d328cb2bbc4e87c36f202c/recipes/password-store"; @@ -56176,11 +56365,11 @@ pelican-mode = callPackage ({ emacs, fetchgit, fetchurl, lib, melpaBuild }: melpaBuild { pname = "pelican-mode"; - version = "20171001.503"; + version = "20180217.317"; src = fetchgit { url = "https://git.korewanetadesu.com/pelican-mode.git"; - rev = "64d41f0ee5970b2d875880994eb287b97cad24a1"; - sha256 = "0xivc8sdp6h3fajyj7g73xnyfqlkhfpm2cs9x3mpyr42502lmn2c"; + rev = "524c001eed50ceee40095d6680787e435b9d3624"; + sha256 = "1559x7wxmflgzjykkbdsgw61zayswpil940n71979qkgqzcc5ggq"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/aede5994c2e76c7fd860661c1e3252fb741f9228/recipes/pelican-mode"; @@ -56867,12 +57056,12 @@ php-mode = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "php-mode"; - version = "20180211.751"; + version = "20180219.1806"; src = fetchFromGitHub { owner = "ejmr"; repo = "php-mode"; - rev = "0d7f970dfffc6532814b5f2290d59391e1cabb78"; - sha256 = "16dvhamcy8a4c4g9k7vxgqaic1wz03adshvhbh4nqflwwyzz7ldp"; + rev = "e9e1b5806c169a8c7a7881530dcd2e9a52ab5fe8"; + sha256 = "1d2isgf17sg7n7vg6dif88yn31yxxgargvllys8azl48x0y40hh9"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/7cdbc35fee67b87b87ec72aa00e6dca77aef17c4/recipes/php-mode"; @@ -57032,6 +57221,27 @@ license = lib.licenses.free; }; }) {}; + pickle = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "pickle"; + version = "20180218.1840"; + src = fetchFromGitHub { + owner = "ahungry"; + repo = "pickle-mode"; + rev = "d672186129a19581c908bae3063e09baa815869c"; + sha256 = "10jl9xinljzb8nra59r6wyrmsr8sbbl40yahpzn4558nmmdckcnb"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/4cb71882f074d3fef1f5a7b504dafcb6adff8ed4/recipes/pickle"; + sha256 = "0fryzmrs6bn6r590qp08jyzx9g6jakf1pahxhcfglsv9k3jbfp13"; + name = "pickle"; + }; + packageRequires = [ cl-lib emacs ]; + meta = { + homepage = "https://melpa.org/#/pickle"; + license = lib.licenses.free; + }; + }) {}; picolisp-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "picolisp-mode"; @@ -57245,12 +57455,12 @@ pipenv = callPackage ({ emacs, f, fetchFromGitHub, fetchurl, lib, melpaBuild, s }: melpaBuild { pname = "pipenv"; - version = "20180207.1216"; + version = "20180222.359"; src = fetchFromGitHub { owner = "pwalsh"; repo = "pipenv.el"; - rev = "cb10661cb11bed9f781c2aef01708f3304f83de1"; - sha256 = "1m8pdn3vyrzna0a1adwm4s22zgykr6cr9pp9p1v6q1ar80hxchrx"; + rev = "364eaf1c823a28db97fe55e7fe85106107a23234"; + sha256 = "1f3xx606xvsmcc73mqml0w07xbkkm2xjirc4pfkb2883cfsk3fq1"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/d46738976f5dfaf899ee778b1ba6dcee455fd271/recipes/pipenv"; @@ -57480,8 +57690,8 @@ src = fetchFromGitHub { owner = "Shirakumo"; repo = "plaster"; - rev = "11eb23920410818fe444887b97ad4c8722d66c85"; - sha256 = "0lqz8m8a2ahvgm0i9cz0j4bisi34czc4s29z70p5p6rdg4g21fk1"; + rev = "c6c9c223d634041411d111b4397574f65e140585"; + sha256 = "0pzdw9jb1p1bi5zc59sjvwxzczg8laz5vlsrs73ah1pk9jckqwf5"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/7e363cffa021e649c052f38cedb7cc01dbe9e24a/recipes/plaster"; @@ -57581,12 +57791,12 @@ playground = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "playground"; - version = "20180207.1011"; + version = "20180224.2325"; src = fetchFromGitHub { owner = "akirak"; repo = "emacs-playground"; - rev = "7e9452ddecc9560ed79cc13af4fe5046996549bb"; - sha256 = "1fbcyds94g0dllr2iq1mf6mxq6300160063zj8r4p3gp3h370sgf"; + rev = "5b8d9eb5ea48313e2b33ed3a390d7a2e04d9dda8"; + sha256 = "1v83mkg4573iy6rjnvi5hshbgp98jhyj2c2swz7p4vfcdcak8j2n"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/f062a74fe1746129879ad19c1735621f58509d33/recipes/playground"; @@ -57986,12 +58196,12 @@ pomidor = callPackage ({ alert, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "pomidor"; - version = "20171214.727"; + version = "20180224.946"; src = fetchFromGitHub { owner = "TatriX"; repo = "pomidor"; - rev = "000dd3800829c469a072e788a272edca24313ee2"; - sha256 = "1rhc1n4r3yjlrxxj1mkziflb475z7gqcqm2r7r7b667f8k1b5wg4"; + rev = "458ff63f640ba741959670fca0e439374d2d840a"; + sha256 = "0vg38cccjfkn2w7a7fxks26x4v27bhxkpz7nfnq1scw88z9hl1sh"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/4e0d4f313081594df23f357c40feb456847d8bd0/recipes/pomidor"; @@ -58322,12 +58532,12 @@ posframe = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "posframe"; - version = "20180212.136"; + version = "20180225.2325"; src = fetchFromGitHub { owner = "tumashu"; repo = "posframe"; - rev = "2073a1f7480aaee8a21405edf44ba28888f64aff"; - sha256 = "0in8nvdgjaj89rg2ckq828vpfpfswj9830zghi7xsky74wysc00k"; + rev = "489620f6bd1ca5a6363d4ab9176b6eeb753e7f3b"; + sha256 = "1p1khm0mcjq6acjh08z5gaw24hns6sg7p1iy8x6zf63c8kyfq2ls"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/fa3488f2ede1201faf4a147313456ed90271f050/recipes/posframe"; @@ -58557,8 +58767,8 @@ src = fetchFromGitHub { owner = "prettier"; repo = "prettier-emacs"; - rev = "0e8b95c4e5898a03e85dbc555c37b4f968292aec"; - sha256 = "0l8i0fbwwyhllkpk8xd6w5gcv65z4ja1ygf6slh5sd1g0ixh29md"; + rev = "fac9dd29720f8417bd8cd5dd8ab5138c6dd7d701"; + sha256 = "00bgwzvha2i2sfi05jdzgpxvbjfpjhj5gv2vn3bnalgd1z3cz89r"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/968ac7bb98b385f8542dc150486982c0ded73187/recipes/prettier-js"; @@ -58763,12 +58973,12 @@ prodigy = callPackage ({ dash, emacs, f, fetchFromGitHub, fetchurl, lib, melpaBuild, s }: melpaBuild { pname = "prodigy"; - version = "20171121.512"; + version = "20180214.1249"; src = fetchFromGitHub { owner = "rejeep"; repo = "prodigy.el"; - rev = "da9ab59dc807968841ef369617edd6a67a9ad1de"; - sha256 = "08nr9gppkn1z8s3llhf7vlxg0hfgx7hzbakahw0qfaf1xri4mzg9"; + rev = "a90f917390cac8ae7e95b57e88a1527b7f3242b3"; + sha256 = "0b53xgja04vsw22yqxj5vnn4w2x23zcm3fsjwzfxlcgy4h50y3ay"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/prodigy"; @@ -59417,8 +59627,8 @@ src = fetchFromGitHub { owner = "google"; repo = "protobuf"; - rev = "e34ec6077af141dd5dfc1c334ecdcce3c6b51612"; - sha256 = "15hvnhkj2ias3h9zkg713p0gixqpnhdxvjp6msbvnm8k99qxccw6"; + rev = "a6037c5230c0ccb6531f80cef909dbfe37257884"; + sha256 = "1847pbxsh2xwfj7vm1hvf88prwni5k2jbswilply034f1648r9ar"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/b4e7f5f641251e17add561991d3bcf1fde23467b/recipes/protobuf-mode"; @@ -60093,12 +60303,12 @@ pyenv-mode-auto = callPackage ({ f, fetchFromGitHub, fetchurl, lib, melpaBuild, pyenv-mode, s }: melpaBuild { pname = "pyenv-mode-auto"; - version = "20160122.2341"; + version = "20180216.2352"; src = fetchFromGitHub { owner = "ssbb"; repo = "pyenv-mode-auto"; - rev = "783a93488e255346f9b1b2658424ffe0d670e8cf"; - sha256 = "090c5lnw2fz674c49szjsac3hdj5dwbnrbn921kvhw6q5lsn8z47"; + rev = "51248f13e98240ab146ff45a8247e0f5286277b2"; + sha256 = "1y5fmc6jrw9xrafq1j2j0k1p5hydvbw1m3zy47b5c55ll97dsflj"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/f3fcb707356bd16fd0b573c176023534cd69d0d7/recipes/pyenv-mode-auto"; @@ -60286,8 +60496,8 @@ src = fetchFromGitHub { owner = "PyCQA"; repo = "pylint"; - rev = "5e79774c5028eb492e59bed92d25088b081cf2db"; - sha256 = "14nxl62cnzab0nrf1j45a9p55sqmcy9mgmkh1wv9lb0v1fyi1x3k"; + rev = "04481735e10c8d4584447a6dba97df8653fc7ec5"; + sha256 = "1v100ccggdhprj7zgs8cs7qi86a6xs2pkzx0whi2hvb8nyyp9gx9"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/a073c91d6f4d31b82f6bfee785044c4e3ae96d3f/recipes/pylint"; @@ -60307,8 +60517,8 @@ src = fetchFromGitHub { owner = "ebanner"; repo = "pynt"; - rev = "76fa85dd0c791a6493d59bd564ce5f6ec20ab40d"; - sha256 = "06rhaqf5wkwk6xl8mp2kyyncnyjclvykal06iqj9sbd4kn5nnq5p"; + rev = "92b3f0e7ee88dde641b9f62c50431f7c499dcf1e"; + sha256 = "1wn1gjql7g2dg7bnwqgx3r66b0hnxcmpmbh1wc5nc312wnklpz6f"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/fdb297084188a957a46dcd036e65d9d893044bea/recipes/pynt"; @@ -60468,6 +60678,34 @@ license = lib.licenses.free; }; }) {}; + python-pytest = callPackage ({ dash, dash-functional, emacs, fetchFromGitHub, fetchurl, lib, magit-popup, melpaBuild, projectile, s }: + melpaBuild { + pname = "python-pytest"; + version = "20180226.305"; + src = fetchFromGitHub { + owner = "wbolster"; + repo = "emacs-python-pytest"; + rev = "0ed385f7e8edd1a7d0aee72f5112459ea9054cbe"; + sha256 = "1wpvgx8ldrnq0pjr8iq65f3m0kmh1c9hnv1lkrgrglqazs2c6hbm"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/d95442748827911e082a55f4fd7c348a3757e274/recipes/python-pytest"; + sha256 = "0n97akqq7dss7rsww311ljh9w1hyc4j64wjmpxjlc9lg5aqwjbh4"; + name = "python-pytest"; + }; + packageRequires = [ + dash + dash-functional + emacs + magit-popup + projectile + s + ]; + meta = { + homepage = "https://melpa.org/#/python-pytest"; + license = lib.licenses.free; + }; + }) {}; python-switch-quotes = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "python-switch-quotes"; @@ -60513,12 +60751,12 @@ python-x = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, folding, lib, melpaBuild, python ? null }: melpaBuild { pname = "python-x"; - version = "20171006.336"; + version = "20180218.1447"; src = fetchFromGitHub { owner = "wavexx"; repo = "python-x.el"; - rev = "9bf0d16cfe7b5f24b98d6b33cbc8763edaceb174"; - sha256 = "0x255lnfyv2i7yz6ipx5adazqmvgmf4mdcixzs1wv85gazmbgfc5"; + rev = "35d6719953e809a07c0bb8f770deb5fa712d00e5"; + sha256 = "1s24a9ji549nhlanm13gq7ghnz0zj6mwpbbmbqk8igsw3arx2nvr"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/87ed5ea4868945df1bf92d1eae5d3ebb83ece117/recipes/python-x"; @@ -60555,12 +60793,12 @@ pyvenv = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "pyvenv"; - version = "20180126.303"; + version = "20180223.22"; src = fetchFromGitHub { owner = "jorgenschaefer"; repo = "pyvenv"; - rev = "f925bcb46ea64b699f7cd06933c48e0d5db88b73"; - sha256 = "1a346qdimr1dvj53q033aqnahwd2dhyn9jadrs019nm0bzgw7g63"; + rev = "71eec02c25006737444dec7dfd004285f6cff6a8"; + sha256 = "1j62qf4llrbmwwi7ynrhnzvh0g4razbc21vdlaa8jkjg6y5id95m"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/e37236b89b9705ba7a9d134b1fb2c3c003953a9b/recipes/pyvenv"; @@ -61926,12 +62164,12 @@ redprl = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "redprl"; - version = "20180207.1002"; + version = "20180216.646"; src = fetchFromGitHub { owner = "RedPRL"; repo = "sml-redprl"; - rev = "113c07f5b7ae112d7e199aa33665352852ac7f12"; - sha256 = "106b8nmhdwwpg6l4p9s3jm55r2b9zlj49iklp7qfbjb2wv6qci8n"; + rev = "fcc5b73e2139529e4c0c8b8639cab6bb51dd2b74"; + sha256 = "0kvh84k9k11xpnvs0kpk4q9nhfjrilwnhlzqmimd51pp7jqz5gff"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/06e7371d703ffdc5b6ea555f2ed289e57e71e377/recipes/redprl"; @@ -62138,13 +62376,13 @@ pname = "related"; version = "20161002.2310"; src = fetchgit { - url = "https://bitbucket.org/lyude/related"; + url = "https://bitbucket.org/julien-montmartin/related"; rev = "0065a2e16eeaa9bface49f7f0815b9cf9719f441"; sha256 = "0gaj1mqv77dahw6zfqlf8q624b2ba589chgaa22vy4vg3lz6qzks"; }; recipeFile = fetchurl { - url = "https://raw.githubusercontent.com/milkypostman/melpa/a39b2fd835f6911e3dd2b42987f65d5bbea36091/recipes/related"; - sha256 = "098rd8rvlx9shbh05zdw7lnrawfkbk4cfan1i963h994538sda1w"; + url = "https://raw.githubusercontent.com/milkypostman/melpa/6248cbbb6c977c9c9332a34b449eb090dd9322b3/recipes/related"; + sha256 = "0nm2dnmz4a5z187mzggsj8xrdy1x84lxx79rmwcrkh1d7jzjhi6f"; name = "related"; }; packageRequires = [ cl-lib ]; @@ -62391,8 +62629,8 @@ src = fetchFromGitHub { owner = "edvorg"; repo = "req-package"; - rev = "0c0ac7451149dac6bfda2adfe959d1df1c273de6"; - sha256 = "0sx3kw1gpliifbc0gh2z1lvig68v3gwqjbj0izgn77js8kqxad84"; + rev = "699d5aa9204c07905db4574406f771c69aa5752c"; + sha256 = "15q8lsld2k8yd8wqrn0hsnj8xvmwj9zgpbrqzjda452jdqsznfcm"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/f58a801f0791566d0c39493a5f82ff0d15d7ab41/recipes/req-package"; @@ -62538,8 +62776,8 @@ src = fetchFromGitHub { owner = "pashky"; repo = "restclient.el"; - rev = "0ce4513a6b5ff1e63c73fda30f11efdb7a296c38"; - sha256 = "194526djlzn96b35pqgsdc5vi4nkib0jma0smp97lay8vj22mjs8"; + rev = "7242da37f7a3973c5fc5e84e8a62ff1aa09eef1b"; + sha256 = "0ll1aws1m46c0k1dxgd05bajj09fxf20ya4rs2wapvzm4mwrbz2c"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/59303304fe1f724596245556dd90f6afffba425d/recipes/restclient"; @@ -62559,8 +62797,8 @@ src = fetchFromGitHub { owner = "pashky"; repo = "restclient.el"; - rev = "0ce4513a6b5ff1e63c73fda30f11efdb7a296c38"; - sha256 = "194526djlzn96b35pqgsdc5vi4nkib0jma0smp97lay8vj22mjs8"; + rev = "7242da37f7a3973c5fc5e84e8a62ff1aa09eef1b"; + sha256 = "0ll1aws1m46c0k1dxgd05bajj09fxf20ya4rs2wapvzm4mwrbz2c"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/59303304fe1f724596245556dd90f6afffba425d/recipes/restclient-helm"; @@ -62618,12 +62856,12 @@ reverse-im = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "reverse-im"; - version = "20170721.940"; + version = "20180213.525"; src = fetchFromGitHub { owner = "a13"; repo = "reverse-im.el"; - rev = "63fb1edee017177c44f8b663a707201b3dd78345"; - sha256 = "1ha4ldfcnw57rg15mbxspymgs6b2b50f6s0fcb6d7k9xai5idmnp"; + rev = "16931909115a922b1cf3846b1f60509b6590001f"; + sha256 = "0ccpnd1n9z18wpf8m9xyx5gps2xh5kxv8s1q2zan2zs9f46sz9pc"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/f282ebbed8ad01b63b0e708ab273db51bf65fdbb/recipes/reverse-im"; @@ -62702,12 +62940,12 @@ rg = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, s }: melpaBuild { pname = "rg"; - version = "20180122.855"; + version = "20180218.1129"; src = fetchFromGitHub { owner = "dajva"; repo = "rg.el"; - rev = "0a4df0c3a64ace6a5aebbfeea5c0161e752471ab"; - sha256 = "0z1igj5c74qdjx5knsf73d7qwfyybfixyilw7z7chbyffw77z1km"; + rev = "26413536ee71ac6ee07f193b94e60e544d800655"; + sha256 = "1ic4ym575qj38xd3565nvwyrhzw7lx2mflbirb5aycnz7dis9xsq"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/9ce1f721867383a841957370946f283f996fa76f/recipes/rg"; @@ -62769,8 +63007,8 @@ src = fetchFromGitHub { owner = "Malabarba"; repo = "rich-minority"; - rev = "3201f6e1769beb9f6cbbda392bef99fce337acf4"; - sha256 = "1qa447k3qq2x1i2nxbm60wzr8kaysk3cifl09c13sv97n4yq3x2b"; + rev = "a50d9b2fd059f6a0e5b22063a5375851a087f61a"; + sha256 = "126slgxa786rcbxdnazyn7svkwk31hy1c2ab7kzswf8f0k81fqk8"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/1e6aed365c42987d64d0cd9a8a6178339b1b39e8/recipes/rich-minority"; @@ -63143,12 +63381,12 @@ rtags = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "rtags"; - version = "20180130.942"; + version = "20180224.1134"; src = fetchFromGitHub { owner = "Andersbakken"; repo = "rtags"; - rev = "2b0c88cc470b06b65232c23df4b6fbfc4b534580"; - sha256 = "047w0khlcawwr9rz7ss52x9jzam4pdqd1cwgx7nqiyv3cd47xfsy"; + rev = "4f27c1cc60742622e6616b579c82b5440ad446d3"; + sha256 = "08310vkd7gyfc9jcis7r5dfdb6spilxw1kf7p8vm078v8hmmjyj0"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3dea16daf0d72188c8b4043534f0833fe9b04e07/recipes/rtags"; @@ -63182,6 +63420,27 @@ license = lib.licenses.free; }; }) {}; + rubik = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "rubik"; + version = "20180222.1214"; + src = fetchFromGitHub { + owner = "Kurvivor19"; + repo = "rubik-mode"; + rev = "c8dab1726463dbc9042a0b00186e4a8df02eb868"; + sha256 = "13razzmk70h5sd69ms0a3ljr285zcad0wnrqkfxbgi5rnppqlkh1"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/00946ed21b0f05b753c792863f6bcc99c26c32a3/recipes/rubik"; + sha256 = "07bbh5vjw3jdxf06lxqm45y8ijcai391mf97xw5c29z33vhqs267"; + name = "rubik"; + }; + packageRequires = [ cl-lib emacs ]; + meta = { + homepage = "https://melpa.org/#/rubik"; + license = lib.licenses.free; + }; + }) {}; rubocop = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "rubocop"; @@ -63563,12 +63822,12 @@ rust-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "rust-mode"; - version = "20180109.544"; + version = "20180221.1130"; src = fetchFromGitHub { owner = "rust-lang"; repo = "rust-mode"; - rev = "cfb440810a010b099e7196f8701c9d990a3641d8"; - sha256 = "17mm7mk8s4s9ka7035bf7bd6sfxwi3m2iss9q3pg2d7931nzh1dz"; + rev = "cc2435b9e5899c0787929a62dc6e6dcdb982febc"; + sha256 = "0aq665cd28k4szc07m6cfl50dvr87i4pkbggfj8qim0gwzsgc4bi"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/8f6e5d990d699d571dccbdeb13327b33389bb113/recipes/rust-mode"; @@ -63626,12 +63885,12 @@ ryo-modal = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "ryo-modal"; - version = "20180114.1004"; + version = "20180222.415"; src = fetchFromGitHub { owner = "Kungsgeten"; repo = "ryo-modal"; - rev = "4dbe9e472306e5d293213842d9488c0b531eae8b"; - sha256 = "0l4153dczvkl88xnppqwdmj78c9rfj1bhl2d4c2sr1gc6hy7nj9l"; + rev = "4d10e251ca734548e48e7f0785b3b69a6e863f67"; + sha256 = "1pqq2mzrfam7lzilpgqnzr192dsisgxnnnkilyksqfk1q199p9my"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/ryo-modal"; @@ -63752,12 +64011,12 @@ sage-shell-mode = callPackage ({ cl-lib ? null, deferred, emacs, fetchFromGitHub, fetchurl, let-alist, lib, melpaBuild }: melpaBuild { pname = "sage-shell-mode"; - version = "20171119.234"; + version = "20180215.35"; src = fetchFromGitHub { owner = "sagemath"; repo = "sage-shell-mode"; - rev = "e4e7523178f09270a28b8b712191b1e980e6e8c9"; - sha256 = "11lk7fpzpak36jgihw3bm99j3w6x18zynqhy714rxmjjhy4lpla2"; + rev = "9f07ff835e8d19afe571dbe414afb690c7b1cb5c"; + sha256 = "07al41ir1ab0z2m2acvx63scr33bfp3asshjl05shs4j9d4bkmdp"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/eb875c50c2f97919fd0027869c5d9970e1eaf373/recipes/sage-shell-mode"; @@ -64029,8 +64288,8 @@ src = fetchFromGitHub { owner = "openscad"; repo = "openscad"; - rev = "ec8aded3241766dda3b89e26fa914d07562de429"; - sha256 = "0lh9zlic3iyhxbbsa0pdxl96gi4s8z7x7nphr8hlzl4if3zb5fg0"; + rev = "21f67de6389234d00a2dde437616063a6479402b"; + sha256 = "1vn3i5gvyn8nn5sfd8lm9csgl1v4m6n59mkif6c6h37h04232dqn"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/2d27782b9ac8474fbd4f51535351207c9c84984c/recipes/scad-mode"; @@ -65409,12 +65668,12 @@ shimbun = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "shimbun"; - version = "20180108.1712"; + version = "20180201.2145"; src = fetchFromGitHub { owner = "emacsorphanage"; repo = "w3m"; - rev = "92be3a5bf5940826882bb6e17a85952a6b4eb537"; - sha256 = "1n3020y18brpi7d286s3qia8fp4nbws16224nqga18hcx00zzdna"; + rev = "4b9664bab3794379af42d549d9540735c16b5a25"; + sha256 = "16wics5k7w7b23zayh9j6jbh6dflk6r8wq75p9bnpw1n36gmm8ig"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/30de78c9cf83de30093a5647976eeaf552d4b2cb/recipes/shimbun"; @@ -65829,12 +66088,12 @@ simple-call-tree = callPackage ({ anaphora, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "simple-call-tree"; - version = "20171223.1037"; + version = "20180224.1256"; src = fetchFromGitHub { owner = "vapniks"; repo = "simple-call-tree"; - rev = "51cbb9baac4a71c9e2759b3dbbd48829b7b0ea79"; - sha256 = "16blbycmqgkkvx1pqyld7jbb37wpwjh1y8kcd23ckdd9pr8qccfs"; + rev = "20059eb5549408def76aeb03d0d20839903dedef"; + sha256 = "0gvhn2r7h6jz7a3i3a8gwlmghv1xfzj0sdib25kz645iylazji4h"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/316a5ffcb3080abd623bbe3065077809e6cbfb74/recipes/simple-call-tree"; @@ -65850,12 +66109,12 @@ simple-httpd = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "simple-httpd"; - version = "20180205.1031"; + version = "20180218.538"; src = fetchFromGitHub { owner = "skeeto"; repo = "emacs-web-server"; - rev = "be73a176a19fff8260369652f688a316e652fc03"; - sha256 = "1ifl1qsg6vxxmj3vysrvw94nn31x8krydin42vpp35w6pspx9f0z"; + rev = "c252765de191441cc25068b35bdff6a912745268"; + sha256 = "08n41cshzxjjd06n8q94yivc72kmwwnmbg469w61v8sanzv0j04q"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/7fabdb05de9b8ec18a3a566f99688b50443b6b44/recipes/simple-httpd"; @@ -65871,12 +66130,12 @@ simple-mpc = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, s }: melpaBuild { pname = "simple-mpc"; - version = "20161103.1219"; + version = "20180224.1801"; src = fetchFromGitHub { owner = "jorenvo"; repo = "simple-mpc"; - rev = "61b39d02313fa51a1dd7326fe24871666c64a077"; - sha256 = "1g8s37misx0kl32ngffqgqdzphz22v25k39q571jz4q1dibhmsyz"; + rev = "ad74cb621e04838f8725ab7dc8716f0f38c90413"; + sha256 = "1g3pb0n5j0s4q85zgjqnw1idvpvq3kwrakv8d6if7xb066v21ng9"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/62d762308c1ec0c1d8f7b4755b7deb285cbac018/recipes/simple-mpc"; @@ -66169,8 +66428,8 @@ src = fetchFromGitHub { owner = "yuya373"; repo = "emacs-slack"; - rev = "02ee1d7339e48c64946041f6f4e09447c3f53e82"; - sha256 = "0grx95xxf314m2k35m1kf20l2pwc6j11ibvrngx4pis7wqwjas3h"; + rev = "61dfcaeb4f560406c188390797448747eef1e90d"; + sha256 = "0pmkjdq1dlbsjpfcgnmxrkj7iggwzw1b0qpyvldwp6h8xlnkca54"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/f0258cc41de809b67811a5dde3d475c429df0695/recipes/slack"; @@ -66228,12 +66487,12 @@ slime = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, macrostep, melpaBuild }: melpaBuild { pname = "slime"; - version = "20180208.323"; + version = "20180218.1356"; src = fetchFromGitHub { owner = "slime"; repo = "slime"; - rev = "8511e9b1180589c307909c623aa5f558f697f203"; - sha256 = "0dbnmvrrd84syn96jz90rgddb3n1cfza2rmzw7p57fzknzmv349w"; + rev = "bb663e97339d1ff217c674d649088493b82d08a9"; + sha256 = "0sc7k7b5fixwpmjx15vpbh3fmaxqz6m21z1ajd4c25jfnxvvhyck"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/14c60acbfde13d5e9256cea83d4d0d33e037d4b9/recipes/slime"; @@ -66396,12 +66655,12 @@ sly = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "sly"; - version = "20180208.226"; + version = "20180221.1414"; src = fetchFromGitHub { owner = "capitaomorte"; repo = "sly"; - rev = "cbf84c36c4eca8b032e3fd16177a7bc02df3ec4c"; - sha256 = "13dyhsravn591p7g6is01mp2ynzjnnj7pwgi57r6xqmd4611y9vh"; + rev = "486bfbe95612bcdc0960c490207970a188e0fbb9"; + sha256 = "0ib4q4k3h3qn88pymyjjmlmnpizdn1mfg5gpk5a715nqsgxlg09l"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/79e7213183df892c5058a766b5805a1854bfbaec/recipes/sly"; @@ -66417,12 +66676,12 @@ sly-company = callPackage ({ company, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, sly }: melpaBuild { pname = "sly-company"; - version = "20160308.557"; + version = "20180212.1653"; src = fetchFromGitHub { owner = "capitaomorte"; repo = "sly-company"; - rev = "08aef69394fbef31dfeb3d3bb72a4557df9d7624"; - sha256 = "128gb6hsb7zig4czwgwjcm58lgqk6rmj7qi17a9cz5gsnggjcwii"; + rev = "dfe18218e4b2ee9874394b50f82f5172f41c462c"; + sha256 = "1bj8w2wfq944cnhsk5xx41mfrjv89scrg4w98kqgda5drkpdf8a7"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/04867a574773e8794335a2664d4f5e8b243f3ec9/recipes/sly-company"; @@ -66519,6 +66778,27 @@ license = lib.licenses.free; }; }) {}; + sly-repl-ansi-color = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild, sly }: + melpaBuild { + pname = "sly-repl-ansi-color"; + version = "20171020.816"; + src = fetchFromGitHub { + owner = "PuercoPop"; + repo = "sly-repl-ansi-color"; + rev = "b9cd52d1cf927bf7e08582d46ab0bcf1d4fb5048"; + sha256 = "0fgcn6bwgz8yyjza07kfi86siargvpq4kp4j20hs6b67ckxjxx0x"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/981e01f562c40e02cb6d56dc1347e922fbad9c18/recipes/sly-repl-ansi-color"; + sha256 = "0wz24kfjl6rp4qss0iq2ilav0mkg2spy2ziikypy7v0iqbssmssi"; + name = "sly-repl-ansi-color"; + }; + packageRequires = [ cl-lib sly ]; + meta = { + homepage = "https://melpa.org/#/sly-repl-ansi-color"; + license = lib.licenses.free; + }; + }) {}; smart-backspace = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "smart-backspace"; @@ -66920,12 +67200,12 @@ smartparens = callPackage ({ cl-lib ? null, dash, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "smartparens"; - version = "20180212.202"; + version = "20180219.758"; src = fetchFromGitHub { owner = "Fuco1"; repo = "smartparens"; - rev = "a03debdf4aeb3232ae54a9712790f6727a592538"; - sha256 = "027nam0jq6ldwgix200w78zj1hp2khqskhcvxavkhychpl8v501y"; + rev = "3452c21f34751bf04f2ede175b3f8eb3fe6ae282"; + sha256 = "0df4q6467a2rkpsml7bg7s9y336cw6zlgrp1s9h04f92fhv8z9c2"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/bd98f85461ef7134502d4f2aa8ce1bc764f3bda3/recipes/smartparens"; @@ -67617,8 +67897,8 @@ src = fetchFromGitHub { owner = "Malabarba"; repo = "speed-of-thought-clojure"; - rev = "ceac82aa691e8d98946471be6aaff9c9a4603c32"; - sha256 = "1a6riq7ksk5m76dsgc75d8b992nyr50l48l8cpms9064m6b0r9jv"; + rev = "a480c887b53cb007b7b099c5ffcab89b9e59d7bc"; + sha256 = "1gf5fsrjigzxabd9k47lb98y3wdjwpw02x9ldnjzrgxfjfbxgqm0"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3a2ccef8af91eada4449d9cd4bda6bd28272722e/recipes/sotclojure"; @@ -67872,12 +68152,12 @@ spacemacs-theme = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "spacemacs-theme"; - version = "20180117.1333"; + version = "20180214.758"; src = fetchFromGitHub { owner = "nashamri"; repo = "spacemacs-theme"; - rev = "fb2a88a604b0eb6bdeb02506733b947e155a9e64"; - sha256 = "0ic09n4ddxv78sb4h5gz9a1frnnbsdkvizdhj2lfdr5xy00hais2"; + rev = "0cd15af82bb3adb5fa18bef795a2ea7f021b7e20"; + sha256 = "19mifs075kkn45dxkgcqixvmf9d72rp79g12vpxi0rp5aw90ddfx"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/6c8ac39214856c1598beca0bd609e011b562346f/recipes/spacemacs-theme"; @@ -68124,12 +68404,12 @@ spiral = callPackage ({ a, avy, clojure-mode, emacs, fetchFromGitHub, fetchurl, highlight, lib, melpaBuild, treepy }: melpaBuild { pname = "spiral"; - version = "20180125.900"; + version = "20180223.340"; src = fetchFromGitHub { owner = "unrepl"; repo = "spiral"; - rev = "8e9707af9d6d61d8ec54edc98b958f1c829e98dd"; - sha256 = "1p91k6xvy0w11p08nbk1b9x33ck6kxz4khgsc39wlhyv02rhqqi0"; + rev = "907b9792467139a942ba7b07ca0276b90770baf9"; + sha256 = "1rggzzvya26abbzd8bc2kpv59kzgm75wqv1vwqnj9c8im1jvs1na"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/77609e10c836a26de43ddb304ecfa275e314da21/recipes/spiral"; @@ -68544,12 +68824,12 @@ ssh-config-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "ssh-config-mode"; - version = "20171109.1549"; + version = "20180224.251"; src = fetchFromGitHub { owner = "jhgorrell"; repo = "ssh-config-mode-el"; - rev = "7824d5f8baf2c97856f5bc7b1ef88befbb1978f3"; - sha256 = "1jqb6d83saliq11q9zkq0ndgpxgyfqjk41srwwnpg66nq031zdxq"; + rev = "e4596accfc29f34388b701c1dd5ebffcb8c70154"; + sha256 = "1jcfhxm2px19b9yy53napj4d22v8s1q76gy68c47yimkbabhmzir"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/750b16ee631b4c2014f2ebf767609bab4b8ee421/recipes/ssh-config-mode"; @@ -68562,22 +68842,22 @@ license = lib.licenses.free; }; }) {}; - ssh-deploy = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: + ssh-deploy = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "ssh-deploy"; - version = "20180129.245"; + version = "20180222.2157"; src = fetchFromGitHub { owner = "cjohansson"; repo = "emacs-ssh-deploy"; - rev = "5d70d89cddae17e4e412c9246871c3cbc860e3c6"; - sha256 = "02cdd5jx03n1xzkkswlcb0l4zf32ysmz2hn76cc7lh4i20iqi06q"; + rev = "aef539bb4feefe927fa48d01736dfadb7b3d7930"; + sha256 = "0vra7y2icid9sdyp7iygwkp4xaas249nm1lcbcyfpaad250g2pn4"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/ssh-deploy"; sha256 = "1ys3cc5fz8y4rsiq3daqgcpa14ssv1q4cw0pqbfscql6mps0mjdm"; name = "ssh-deploy"; }; - packageRequires = []; + packageRequires = [ emacs ]; meta = { homepage = "https://melpa.org/#/ssh-deploy"; license = lib.licenses.free; @@ -68835,6 +69115,27 @@ license = lib.licenses.free; }; }) {}; + stgit = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "stgit"; + version = "20171130.759"; + src = fetchFromGitHub { + owner = "ctmarinas"; + repo = "stgit"; + rev = "416a4569ccd644718b694d4c587b313f357c6f4d"; + sha256 = "19d8r0l0bqzwkbzd90symq65w2ay30k5bc2xrgdqpawiqz2sx7qf"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/726da64b7baea1735a916b826bdfb8f575860e21/recipes/stgit"; + sha256 = "1gbr0pvvig2vg94svy1r6zp57rhyg6n9yp7qvlkfal1z2lhzhs0g"; + name = "stgit"; + }; + packageRequires = []; + meta = { + homepage = "https://melpa.org/#/stgit"; + license = lib.licenses.free; + }; + }) {}; sticky = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "sticky"; @@ -69211,6 +69512,27 @@ license = lib.licenses.free; }; }) {}; + sudden-death = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "sudden-death"; + version = "20180216.1623"; + src = fetchFromGitHub { + owner = "yewton"; + repo = "sudden-death.el"; + rev = "791a63d3f4df192e71f4232a9a4c5588f4b43dfb"; + sha256 = "0z3adwd6ymapkdniny3ax2i3wzxp11g6in4bghbcr9bfdxcsf7ps"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/3f20f389a2d7ddf49ca64d945b41584a7c120faf/recipes/sudden-death"; + sha256 = "1wrhb3d27j07i64hvjggyajm752w4mhrhq09lfvyhz6ykp1ly3fh"; + name = "sudden-death"; + }; + packageRequires = []; + meta = { + homepage = "https://melpa.org/#/sudden-death"; + license = lib.licenses.free; + }; + }) {}; sudo-edit = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "sudo-edit"; @@ -69277,12 +69599,12 @@ suggest = callPackage ({ dash, emacs, f, fetchFromGitHub, fetchurl, lib, loop, melpaBuild, s }: melpaBuild { pname = "suggest"; - version = "20180206.1327"; + version = "20180214.1523"; src = fetchFromGitHub { owner = "Wilfred"; repo = "suggest.el"; - rev = "27c5c7722248baff572a0f3a672662618be4eebc"; - sha256 = "0pwd0cic3kj977171mpl0kkzas5l6cr806w1mhymcncgbybnr1pk"; + rev = "66051b2fd3d21a8e103928782a8c926ea434beba"; + sha256 = "1xj3jzsh44ymah8nvjvm7i8g81vkq6wk7mcq2rm2qvaxin4l1bcp"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/b9fd27e812549587dc2ec26bb58974177ff263ff/recipes/suggest"; @@ -69547,27 +69869,6 @@ license = lib.licenses.free; }; }) {}; - swbuff = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: - melpaBuild { - pname = "swbuff"; - version = "20041012.18"; - src = fetchFromGitHub { - owner = "emacsorphanage"; - repo = "swbuff"; - rev = "dcde4ddc7beafef3150e8c645724bdbbf8596028"; - sha256 = "1hxwa3hdhdx3ikfkblda748assm0k5mgwpdjv3jif37n0lw0f435"; - }; - recipeFile = fetchurl { - url = "https://raw.githubusercontent.com/milkypostman/melpa/39e87d0e01a4a836671b6d6e22091df6ebecf566/recipes/swbuff"; - sha256 = "1bqnq6zxkq4yyq3khnkbprgwq5k93rpcmmkjbr9wqf9drfld1bkk"; - name = "swbuff"; - }; - packageRequires = []; - meta = { - homepage = "https://melpa.org/#/swbuff"; - license = lib.licenses.free; - }; - }) {}; sweetgreen = callPackage ({ cl-lib ? null, dash, fetchFromGitHub, fetchurl, helm, lib, melpaBuild, request }: melpaBuild { pname = "sweetgreen"; @@ -69592,12 +69893,12 @@ swift-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, seq }: melpaBuild { pname = "swift-mode"; - version = "20180124.2324"; + version = "20180222.232"; src = fetchFromGitHub { owner = "chrisbarrett"; repo = "swift-mode"; - rev = "7739e4954cc614ecd6b37e935f82ad057e256d56"; - sha256 = "09mvwfi3nv4hkdvh76d7737nl3zaxn4a5vpmv2645q9s4vcq8zj8"; + rev = "4e2227906c90631bfe5109df3e7f57bc1e70ac29"; + sha256 = "02xpb453jdaqwx8rsc3zg2fnxzfv8fs993kw1bk45s4dja1f95p4"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/19cb133191cd6f9623e99e958d360113595e756a/recipes/swift-mode"; @@ -69634,12 +69935,12 @@ swiper = callPackage ({ emacs, fetchFromGitHub, fetchurl, ivy, lib, melpaBuild }: melpaBuild { pname = "swiper"; - version = "20180211.1018"; + version = "20180225.744"; src = fetchFromGitHub { owner = "abo-abo"; repo = "swiper"; - rev = "cc5197d5de78ba981df54815c8615d795e0ffdc5"; - sha256 = "0c8866mb2ca419b6zh153vp298dxwldj29lbrynwr1jlpjf1dbr5"; + rev = "e4b05e7af0ea80c91ddca6be5eae447a0ba3b8b5"; + sha256 = "00vdb4mwgy6cza3ybjza2xk3rzk4y14d83cnvw58wvnj190gphm3"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/e64cad81615ef3ec34fab1f438b0c55134833c97/recipes/swiper"; @@ -69694,22 +69995,22 @@ license = lib.licenses.free; }; }) {}; - switch-window = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }: + switch-window = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "switch-window"; - version = "20170718.1932"; + version = "20180222.1731"; src = fetchFromGitHub { owner = "dimitri"; repo = "switch-window"; - rev = "67113287ba61ce1951363a49f54148743dcea51e"; - sha256 = "06s1zdy2mlw63w3rnyja9jkvq4m5b46mvi8qjwxcpgqjdihj6f6m"; + rev = "680182240012c2ad8fb35479f915e653315b4803"; + sha256 = "0fkz29spgfbx7d1hi1xm71wa1glk448v7gidqgrdylsmbzwkj1y9"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/7d2204e3b53ade1e400e143ac219f3c7ab63a1e9/recipes/switch-window"; sha256 = "02f0zjvlzms66w1ryhk1cbr4rqwklzvgcjfiicj0lcnqqx61m2k2"; name = "switch-window"; }; - packageRequires = [ cl-lib ]; + packageRequires = [ emacs ]; meta = { homepage = "https://melpa.org/#/switch-window"; license = lib.licenses.free; @@ -69760,12 +70061,12 @@ sx = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, json ? null, let-alist, lib, markdown-mode, melpaBuild }: melpaBuild { pname = "sx"; - version = "20180209.1414"; + version = "20180212.1101"; src = fetchFromGitHub { owner = "vermiculus"; repo = "sx.el"; - rev = "95100fa3c933f6b00519baa3c7073b882a1b4603"; - sha256 = "010mlsry5s8xdah928zxy55xr51k91sqrbxv7fprir21y7nv044j"; + rev = "833435fbf90d1c9e927d165b155f3b1ef39271de"; + sha256 = "1369xaxq1vy3d9yh862ddnhddikdpg2d0wv1ly00pnvdp9v4cqgd"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/f16958a09820233fbe2abe403561fd9a012d0046/recipes/sx"; @@ -69781,12 +70082,12 @@ symbol-overlay = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "symbol-overlay"; - version = "20171103.2306"; + version = "20180218.729"; src = fetchFromGitHub { owner = "wolray"; repo = "symbol-overlay"; - rev = "305ef1d283923d2b0f1cd751f57f71754ab714e6"; - sha256 = "0j5542283mmdl30syk0k5p6ybb0w3xlnamjrrafdaj618v3anvgv"; + rev = "1d610fa5023e210e59f823e1bbe819f0fb8727ef"; + sha256 = "14v5rw2yby2n3dhzc7y1jwnmz53apljb34a9g64h08wdpg2ff0wq"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/c2a468ebe1a3e5a35ef40c59a62befbf8960bd7b/recipes/symbol-overlay"; @@ -70371,8 +70672,8 @@ src = fetchFromGitHub { owner = "phillord"; repo = "tawny-owl"; - rev = "b6838add6e418eccb557f8261c49ea5d65a7068d"; - sha256 = "157gxkdryzh1zzcinljmzpbmb1vhrmkz37zfkbyl3ls8ibnw3lxb"; + rev = "f10b81de14a71c6cb682a46d1a5012daba321e9b"; + sha256 = "0iwhxikv81i45q6q31yhbij2fli1g7vsbnv5bsaf1rshbwjla3k6"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/ea9a114ff739f7d6f5d4c3167f5635ddf79bf60c/recipes/tawny-mode"; @@ -70535,12 +70836,12 @@ telephone-line = callPackage ({ cl-generic, cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, seq }: melpaBuild { pname = "telephone-line"; - version = "20171109.1616"; + version = "20180220.109"; src = fetchFromGitHub { owner = "dbordak"; repo = "telephone-line"; - rev = "b3eaf4b8254bb1031f85ce7ac73ffdc856059d9a"; - sha256 = "1g2gpfqxs3mxwskrkdszab02mxfmwfli0h0yw8b5izb4g2a4gkiz"; + rev = "3e73a0ed2457e7b6991ea6555a1379bf9b77053b"; + sha256 = "0bwicz1xymq5j57m2kc8myjnc2dyfljm1jz2l80ifmlkdn549x92"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/9c998b70365fb0a210c3b9639db84034c7d45097/recipes/telephone-line"; @@ -71295,8 +71596,8 @@ src = fetchFromGitHub { owner = "apache"; repo = "thrift"; - rev = "35d62edd6e9ff84b0fdd472e132a739b663a41c2"; - sha256 = "012sgyx7zqll08zfl2v1jkik5p4wxzvp40njm6h5kps5igx2wnal"; + rev = "d907cc92db5b93e699a4282e979d097ea863215a"; + sha256 = "1zswprjkjyav2502dfsyyvh9w0hs43qpfwq9q4617p909d0sj1nb"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/857ab7e3a5c290265d88ebacb9685b3faee586e5/recipes/thrift"; @@ -71375,12 +71676,12 @@ tide = callPackage ({ cl-lib ? null, dash, fetchFromGitHub, fetchurl, flycheck, lib, melpaBuild, s, typescript-mode }: melpaBuild { pname = "tide"; - version = "20180208.246"; + version = "20180212.2229"; src = fetchFromGitHub { owner = "ananthakumaran"; repo = "tide"; - rev = "ca8a1c49eff59a07fefadb40d5bd60b4eee73605"; - sha256 = "0avxxgmgl1q23yj087y9vfi0r6w8ckm0l3pj9syd9yj1l05wbrwz"; + rev = "d80f62c07ab880fa486853846dbcda15351b61b5"; + sha256 = "00bky1vxw08s0z1s9jm813acrnawj0s6mkg71d82lc4ig5x4lbvi"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/a21e063011ebbb03ac70bdcf0a379f9e383bdfab/recipes/tide"; @@ -72087,8 +72388,8 @@ src = fetchFromGitHub { owner = "jorgenschaefer"; repo = "circe"; - rev = "58fc1a3c7f9f6e3126585b1ab2f3d00f824b7d7c"; - sha256 = "1vsh2x794zaf02zql4s6bn3v0m3xm43icvrn7jfmi660qh3f4bsy"; + rev = "f7f7cb62a992120bf80c3a078bec1c029f8ff0cd"; + sha256 = "122wvsxvv3yzkdjfi8s5gbl371bzi5kw377a7f3cpp7hxz4i24bl"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/a2b295656d53fddc76cacc86b239e5648e49e3a4/recipes/tracking"; @@ -72146,12 +72447,12 @@ tramp-term = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "tramp-term"; - version = "20141104.1345"; + version = "20180223.727"; src = fetchFromGitHub { owner = "randymorris"; repo = "tramp-term.el"; - rev = "983ed67ee65d26a51c641f306fa6b921ec83eeaf"; - sha256 = "0cgx6h9a49qj7x6bgsnsa20hi1yj5k080x4x0jpn6l9bj5nqiaip"; + rev = "7c29f888de0385a676dbf9a4e17bac0111f5c10a"; + sha256 = "1ch9y632kggl3q6yx3g685j3dfbhy7yiwqh8cbxs3wja3rvml8xa"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/5c84660c641f0bdf3cca8ad2a0f8f6e5d18b59c3/recipes/tramp-term"; @@ -72293,12 +72594,12 @@ treemacs = callPackage ({ ace-window, cl-lib ? null, dash, emacs, f, fetchFromGitHub, fetchurl, ht, hydra, lib, melpaBuild, pfuture, s }: melpaBuild { pname = "treemacs"; - version = "20180207.2220"; + version = "20180221.1229"; src = fetchFromGitHub { owner = "Alexander-Miller"; repo = "treemacs"; - rev = "9ad516c8bd2a8db58ed9934420f6626921ab7b47"; - sha256 = "09qbz4ss5k6wd7r00y280kkhsp4dx57ghrzdld53fkx2gmhq6zr1"; + rev = "e8be02971ad6c7a9c33ec544fa41b4b2f6827a35"; + sha256 = "0fk45jmnx34azldxa4yrv6lqmkaxkpkqbnwnn29q7y4ld0ljghs0"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/7a680ee3b4a0ab286ac04d84b3fba7606b40c65b/recipes/treemacs"; @@ -72318,8 +72619,8 @@ src = fetchFromGitHub { owner = "Alexander-Miller"; repo = "treemacs"; - rev = "9ad516c8bd2a8db58ed9934420f6626921ab7b47"; - sha256 = "09qbz4ss5k6wd7r00y280kkhsp4dx57ghrzdld53fkx2gmhq6zr1"; + rev = "e8be02971ad6c7a9c33ec544fa41b4b2f6827a35"; + sha256 = "0fk45jmnx34azldxa4yrv6lqmkaxkpkqbnwnn29q7y4ld0ljghs0"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/7a680ee3b4a0ab286ac04d84b3fba7606b40c65b/recipes/treemacs-evil"; @@ -72339,8 +72640,8 @@ src = fetchFromGitHub { owner = "Alexander-Miller"; repo = "treemacs"; - rev = "9ad516c8bd2a8db58ed9934420f6626921ab7b47"; - sha256 = "09qbz4ss5k6wd7r00y280kkhsp4dx57ghrzdld53fkx2gmhq6zr1"; + rev = "e8be02971ad6c7a9c33ec544fa41b4b2f6827a35"; + sha256 = "0fk45jmnx34azldxa4yrv6lqmkaxkpkqbnwnn29q7y4ld0ljghs0"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/7a680ee3b4a0ab286ac04d84b3fba7606b40c65b/recipes/treemacs-projectile"; @@ -72543,12 +72844,12 @@ tuareg = callPackage ({ caml, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "tuareg"; - version = "20180207.836"; + version = "20180218.130"; src = fetchFromGitHub { owner = "ocaml"; repo = "tuareg"; - rev = "45f73c8fb4c6467fc54a5a905deea322ffae180c"; - sha256 = "1xhbnz0lv771bbpb6vizacdn2j47y2spdf42m72iv5iix6cgpnmq"; + rev = "b9941efaba0dbf40ee96c9f1829b562052b3f2d3"; + sha256 = "1nlb46mkyzdfb0k98wsqqk7mwyh6dfw4i83wxmdpixskww4iywfj"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/01fb6435a1dfeebdf4e7fa3f4f5928bc75526809/recipes/tuareg"; @@ -72624,22 +72925,22 @@ license = lib.licenses.free; }; }) {}; - turing-machine = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: + turing-machine = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "turing-machine"; - version = "20170512.1438"; + version = "20180221.2038"; src = fetchFromGitHub { owner = "therockmandolinist"; repo = "turing-machine"; - rev = "4b5901a13b38028b05ce19cecc78bcd2f708f97d"; - sha256 = "1avsqqpsbzlm0wi6fc5lgnmhps5wcr6gp05d4hw51sd5r0vx00dk"; + rev = "fa60b76a5bac1f54b7a1b3dc55aae7602c7e385b"; + sha256 = "0k1r0zkcr44kiki8cvdqwx09xpvpz7nkbq9w6i4gqy5h78zy5k79"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/a003b40a52a92b3ab4d1ffc003f570d4fa6bfbde/recipes/turing-machine"; sha256 = "1ndy953q9hr1psqqkkqsffyvj800cnqdxcrixqiw0ls77f2kczcn"; name = "turing-machine"; }; - packageRequires = [ cl-lib emacs ]; + packageRequires = [ emacs ]; meta = { homepage = "https://melpa.org/#/turing-machine"; license = lib.licenses.free; @@ -72816,12 +73117,12 @@ typescript-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "typescript-mode"; - version = "20180118.2305"; + version = "20180222.534"; src = fetchFromGitHub { owner = "ananthakumaran"; repo = "typescript.el"; - rev = "7249d76e2d4580c5c2f1f5978490b1fe0ffc57dc"; - sha256 = "0bvarlk3pmzh1g489rdbsh0c255fj78si99m9a6l4ha9jk4xa5b6"; + rev = "2815dd1b4bbf902fb61e0a8f1aca6319c7b0c940"; + sha256 = "0d97frhcf6g4ijr1vphfnvrchj2p1rfpj7zrvj8i3jzb6dakyw4c"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/d3f534a1e2cee4ad2e32e32802c5080207417b3d/recipes/typescript-mode"; @@ -72883,8 +73184,8 @@ src = fetchFromGitHub { owner = "mrkkrp"; repo = "typit"; - rev = "41309d8a64a992f532753093742c15d413c446b5"; - sha256 = "1fqaf4n236l4qzy4ac370laysb9jnj98769nri6qkirsfzk6hcgd"; + rev = "45dc6ba44fd5f2aece9da4a0e88effb947fe6c0e"; + sha256 = "1q3gva57r7g9iqvkfi90zih97dq37ds2vfbjisqxzh43vab8hsjv"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/d17d019155e19c156f123dcd702f18cfba488701/recipes/typit"; @@ -73005,12 +73306,12 @@ ujelly-theme = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "ujelly-theme"; - version = "20170905.1505"; + version = "20180214.824"; src = fetchFromGitHub { owner = "marktran"; repo = "color-theme-ujelly"; - rev = "d08fe8e01db6df151b38c3001fba239a9a22369a"; - sha256 = "1a93pd7c2fgdy4vhhwy0lm7plyrwfqa9177m2x5kfblz0q51n6y8"; + rev = "bf724ce7806a738d2043544061e5f9bbfc56e674"; + sha256 = "0pz26q5qfq4wiqcpfkq26f19q5gyiv8q71sq4k77hkss5a5b5fqg"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/091dcc3775ec2137cb61d66df4e72aca4900897a/recipes/ujelly-theme"; @@ -73733,8 +74034,8 @@ src = fetchFromGitHub { owner = "diml"; repo = "utop"; - rev = "d6e873cafc40291f0fe27ac9fffb1051c0ab448d"; - sha256 = "05w76h4hlhr7i6z68s45w241hxg5gh49qh7ipbi53dr2sm8d7v54"; + rev = "262539ae26f5e0729d6ef59009e6339a1ec21e94"; + sha256 = "0f6m9nfvy7vgpnzra8xrb0bpgnhgi93iif4d1mswylwvj3805s6s"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/30489fe52b4031184e54f994770aa3291257bc9d/recipes/utop"; @@ -73981,12 +74282,12 @@ vc-fossil = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "vc-fossil"; - version = "20171018.2216"; + version = "20180215.835"; src = fetchFromGitHub { owner = "venks1"; repo = "emacs-fossil"; - rev = "abdb5487831e641c291c0dcb3848f539ca11f400"; - sha256 = "024bf8cjf3srz0zrxk90c63yz9v525m83znb2fscwa1fwvnnpqkn"; + rev = "7c5af95181213db38f81f5f9586f3334301a3ea0"; + sha256 = "1c18ywvs0l5w7ip2igksjy48awzas8mph7plpvp1v8c67a3a3m2m"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/31c5ee4b625b90c1af66d7d11a25af8e1aa307b1/recipes/vc-fossil"; @@ -74405,8 +74706,8 @@ src = fetchFromGitHub { owner = "mrkkrp"; repo = "vimish-fold"; - rev = "1469c953bc20d21d87ce5d92def767e551cda07c"; - sha256 = "0nywz6nk1qanx7z9sykf28h9c2qj7xzs9w4hya4vmhwigqqbhldl"; + rev = "c904cd3e8515e76fb836615305e174369211f6df"; + sha256 = "1kwd6f2qi3p41kryd8z01lkiw7ikpgywgpfy9zbjyb5x6z2hn35s"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/b4862b0a3d43f073e645803cbbf11d973a4b51d5/recipes/vimish-fold"; @@ -74632,12 +74933,12 @@ vmd-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "vmd-mode"; - version = "20161106.125"; + version = "20180223.556"; src = fetchFromGitHub { owner = "blak3mill3r"; repo = "vmd-mode"; - rev = "e3b27f4f179002984643895292bb207c3e221a5c"; - sha256 = "0gpamwnsszhna9crhbg2zcvr9hrq7lackhgclq63lsvcm0z2ynfz"; + rev = "24e38a20951dfad6e3e985c7cc6286c1e271da5f"; + sha256 = "00anpbnf0h6iikhpqz4mss507j41xwvv27svw41kpgcwsnrmrqwm"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/vmd-mode"; @@ -74779,12 +75080,12 @@ w3m = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "w3m"; - version = "20180116.135"; + version = "20180221.2059"; src = fetchFromGitHub { owner = "emacsorphanage"; repo = "w3m"; - rev = "92be3a5bf5940826882bb6e17a85952a6b4eb537"; - sha256 = "1n3020y18brpi7d286s3qia8fp4nbws16224nqga18hcx00zzdna"; + rev = "4b9664bab3794379af42d549d9540735c16b5a25"; + sha256 = "16wics5k7w7b23zayh9j6jbh6dflk6r8wq75p9bnpw1n36gmm8ig"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/30de78c9cf83de30093a5647976eeaf552d4b2cb/recipes/w3m"; @@ -75156,12 +75457,12 @@ web-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "web-mode"; - version = "20180211.945"; + version = "20180224.733"; src = fetchFromGitHub { owner = "fxbois"; repo = "web-mode"; - rev = "d667edc2e35f5e4fe8cc4465e6359ee001a1516a"; - sha256 = "072x1kgzm9pp3bg1sq7zb1v95m19ksnnjdvf26ablwcldsgapncd"; + rev = "c6d5cab4fc30ff9ca8b55a2a37d3ae3f7f540859"; + sha256 = "03vb5aqyvqzxxw5zafp0hgc5vs7c74917p4r4ki9dp2qwvh82ziq"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/6f0565555eaa356141422c5175d6cca4e9eb5c00/recipes/web-mode"; @@ -75534,12 +75835,12 @@ which-key = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "which-key"; - version = "20180131.606"; + version = "20180225.1951"; src = fetchFromGitHub { owner = "justbur"; repo = "emacs-which-key"; - rev = "fce520f8af727bd33861f8d0f7655c01ea84ad85"; - sha256 = "1sgaln0d6rslvln4bvznkp401sizngwp6ypscp4gn95ygq2aam39"; + rev = "0f80d0f95cbf133f52f64578d6a152e7e48ceb0e"; + sha256 = "0bljzvggx1dzjl904bryny9pdg7xcncnqqzmvymgc3i6j70c0v2f"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/315865a3df97c0694f648633d44b8b34df1ac76d/recipes/which-key"; @@ -75727,8 +76028,8 @@ src = fetchFromGitHub { owner = "foretagsplatsen"; repo = "emacs-js"; - rev = "1b09b1b2848ab21c412f2fe7a259b1dcea2c733c"; - sha256 = "1g53id1wc6xfa3066m9c4f0f0chsnsv8mqqs5v6zx7yf4nv9v9ja"; + rev = "5922cf54533e1f8a3b1db5f57f07ececf9a20e1e"; + sha256 = "1qjs9xkqv3084hj67vk9cz4pnkw7hzl48fzps5kng8ip94yiazh3"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/78d7a15152f45a193384741fa00d0649c4bba91e/recipes/widgetjs"; @@ -75786,12 +76087,12 @@ wilt = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, s }: melpaBuild { pname = "wilt"; - version = "20151105.518"; + version = "20180220.54"; src = fetchFromGitHub { owner = "sixty-north"; repo = "emacs-wilt"; - rev = "5febe367c6c3729848654358af4d17ee2987da8d"; - sha256 = "1n45m8xn65a2lg8ff7m6hbqnp2j49n9sfyr924laljvhjbi37knd"; + rev = "04dbe37fa35d0b24c791421785d2c97a8cbfe2cc"; + sha256 = "197kqp22pyy1in2rq063mahvrf00vrfvgnfkqp0zy7hpkhiiqvim"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/eea4f2ca8b4f9ea93cc02151fdda6cfee5b68b70/recipes/wilt"; @@ -76142,12 +76443,12 @@ with-editor = callPackage ({ async, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "with-editor"; - version = "20180111.433"; + version = "20180217.548"; src = fetchFromGitHub { owner = "magit"; repo = "with-editor"; - rev = "04d59d68dab58a7cf3034c84d8ba0553b78ae30c"; - sha256 = "080f39m9nmi163arpmxw45xwadb7q7w7p385yi1jy62bzvqnk0pm"; + rev = "fcbccec6ec0f6639eab769d6ff8e97f25347a48e"; + sha256 = "079dy4b409i9016j3fkgwxggw8332hkvnnm86am46va3lqpd3jr9"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/8c52c840dc35f3fd17ec660e113ddbb53aa99076/recipes/with-editor"; @@ -76646,12 +76947,12 @@ x509-mode = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "x509-mode"; - version = "20170909.632"; + version = "20180225.2330"; src = fetchFromGitHub { owner = "jobbflykt"; repo = "x509-mode"; - rev = "240b5045dcce18190bdabd91d74f48d3610a6fe2"; - sha256 = "0pi5hi0n6f2hif5hz1g04rk509rb4jlw6nrlhc8fg5k6x4n7ci3p"; + rev = "33cddc0fe18652ba707308e907b255ead60e2850"; + sha256 = "05b7ifmjiy5rw0ywyjknf46garsyfaxrrdzn4rjwrw1crf8f804r"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/27145423eb4e68e006ef96868a35b99d119a3099/recipes/x509-mode"; @@ -76688,12 +76989,12 @@ xah-css-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "xah-css-mode"; - version = "20180120.241"; + version = "20180219.2311"; src = fetchFromGitHub { owner = "xahlee"; repo = "xah-css-mode"; - rev = "ee1c71cd2b3fc00a76e55789ad9a74eed4ae59c2"; - sha256 = "16wbdm2a5wdpfhxwd1wlqnj0h1ivrrq00nk8ddzp7qsdc8m1i4gn"; + rev = "cf452fd0f2e742812a4c69e41cb5403f22b0a16a"; + sha256 = "1wjj3sj90az5y4a7cy0pblwxi0xbj5gg72jdr9wbm95si582vk58"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/05eed39bae37cc8359d2cc678052cbbcc946e379/recipes/xah-css-mode"; @@ -76709,12 +77010,12 @@ xah-elisp-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "xah-elisp-mode"; - version = "20170828.1"; + version = "20180225.1515"; src = fetchFromGitHub { owner = "xahlee"; repo = "xah-elisp-mode"; - rev = "6e94446566df206911afa107d06aec50ac3a56fc"; - sha256 = "028y8dlb5b4vclg03imcipjp56l1m4klgj69f0n7ir0rr6xwl3f6"; + rev = "cf1cce0ddc3cba18ccd506b04d8278189fbd92c2"; + sha256 = "0wdfdjcq0yrj2g995879y5ymjb5z1pv38vxvniclifg478qym5yy"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/05eed39bae37cc8359d2cc678052cbbcc946e379/recipes/xah-elisp-mode"; @@ -76751,12 +77052,12 @@ xah-fly-keys = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "xah-fly-keys"; - version = "20180211.1348"; + version = "20180221.1809"; src = fetchFromGitHub { owner = "xahlee"; repo = "xah-fly-keys"; - rev = "b88e84bafc93b109c53cee2be88b8fd6517187be"; - sha256 = "1394v3mgmx7hwxi3slszhlc82hds6c4p0pfglyd2bf33c56shk6h"; + rev = "c01ddd038e03051bcc8010629b7548838db2531b"; + sha256 = "132afibrgz6381nanjhalkgqmxwia6ykyprrasa19m9kbm96xwdl"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/05eed39bae37cc8359d2cc678052cbbcc946e379/recipes/xah-fly-keys"; @@ -76814,12 +77115,12 @@ xah-math-input = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "xah-math-input"; - version = "20170905.849"; + version = "20180216.1040"; src = fetchFromGitHub { owner = "xahlee"; repo = "xah-math-input"; - rev = "fcdfbed46ff81c8da84422611e0009c6b267e359"; - sha256 = "01s4fhnp4zqh2cmqbp2sh1sbdcyq4i5hy1r8manqa26m041xk2z0"; + rev = "16a441944da3fb3f844b93d0add1e042e1b5377a"; + sha256 = "1vr7dkibw5ibd1c3snxy2pw055yl620pi2vynxszsk82shz2xvbz"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/05eed39bae37cc8359d2cc678052cbbcc946e379/recipes/xah-math-input"; @@ -77427,8 +77728,8 @@ src = fetchFromGitHub { owner = "drdv"; repo = "yahtzee"; - rev = "b028fc03a1526b166043e783add3be4f04b7a92e"; - sha256 = "0abl81q726jdhlirz77vl55xdbhpyfqrfqc2x6qdz9jmh04r912g"; + rev = "c2912e845d74a22436bdf720eb9bc543d0e0c45c"; + sha256 = "1swnr1nrlyd7ij4m05dvqwdfmpj41b3ibfqmb45qm073f27gvj65"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/200169fdabce0ae3a2ecb6f4f3255c15ec3ed094/recipes/yahtzee"; @@ -77465,12 +77766,12 @@ yaml-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "yaml-mode"; - version = "20180204.2333"; + version = "20180212.1556"; src = fetchFromGitHub { owner = "yoshiki"; repo = "yaml-mode"; - rev = "7f4103736178fc6e3a9a9ba3b3d0516986ab8b71"; - sha256 = "0y153522yg5qmkdcbf7h87zcambgl9hf9bwk8dq22c0vgdc04v3i"; + rev = "3fc5a33760b0bbb6e67adbce48ab3dc4ae34b847"; + sha256 = "1ijq7ay5lx77nibzqc1kih64v4bg4790as1zg26igp7ivg66l1m6"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/cae2ac3513e371a256be0f1a7468e38e686c2487/recipes/yaml-mode"; @@ -77549,12 +77850,12 @@ yankpad = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "yankpad"; - version = "20180127.254"; + version = "20180220.1049"; src = fetchFromGitHub { owner = "Kungsgeten"; repo = "yankpad"; - rev = "4b04dd134599b2e360c10d8be9110078aa1aca9d"; - sha256 = "031v4r5spgsl8i0vgfzrwvcp8s8vbdw0kf56wj7qz9732hmb14j7"; + rev = "de672dab9df4a0bffb44cdadaace93d00d9a8848"; + sha256 = "1w0lkn1prv9xd4pn81kqxk26s37ia1xk0kz8qahcvjg7z4igyy9n"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/e64746d10f9e0158621a7c4dc41dc2eca6ad573c/recipes/yankpad"; @@ -77696,12 +77997,12 @@ yasnippet = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "yasnippet"; - version = "20180211.1442"; + version = "20180218.459"; src = fetchFromGitHub { owner = "joaotavora"; repo = "yasnippet"; - rev = "c9277d326e9c8b6052bbb35eb86467e43a7e9424"; - sha256 = "0hddvg7b3ba1irydhybr011d9dfxvnqj9km4km9l3xk9fx0kkqvw"; + rev = "3d7cafccf8d7ea9d62e0ccd63c30769de5b8cf01"; + sha256 = "0m5z46vdv5npwpkqc87jsf488k31mpqphsg1yayy4pjqz2bn68vb"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/5d1927dc3351d3522de1baccdc4ce200ba52bd6e/recipes/yasnippet"; @@ -77717,12 +78018,12 @@ yasnippet-snippets = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, yasnippet }: melpaBuild { pname = "yasnippet-snippets"; - version = "20180122.521"; + version = "20180222.440"; src = fetchFromGitHub { owner = "AndreaCrotti"; repo = "yasnippet-snippets"; - rev = "b42c2b670bdd761b9c1c232998ebf4bbc5b914e8"; - sha256 = "0mzfck8jdcy6p18r37nc06w888zhvd3kamaaxzspbda4yws7y2wk"; + rev = "2373036c13d71c5fab2616d97498213f54688bd6"; + sha256 = "18sdc92qaacxp757yqdv71hx2pjhcy33vshkwjdi6mmmqa1d2zq8"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/25b8d4efe2e7833eb95dfdf33aa3ecc34af7a687/recipes/yasnippet-snippets"; @@ -77742,8 +78043,8 @@ src = fetchFromGitHub { owner = "mineo"; repo = "yatemplate"; - rev = "c1de31d2b16d98af197a4392b6481346ab4e8d57"; - sha256 = "0lp5ym2smmvmlxpdyv4kh75qsz8dsdz9afd8nxaq8y4fazzabblx"; + rev = "4ab835c5ee90a1dbc31c4275a563a9e741a78c6a"; + sha256 = "119i1p1rj329yh7d5a1wizrwhbvnildzzhl2bv50vkswg9nvg3na"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/8ba3cdb74f121cbf36b6d9d5a434c363905ce526/recipes/yatemplate"; @@ -77758,11 +78059,11 @@ }) {}; yatex = callPackage ({ fetchhg, fetchurl, lib, melpaBuild }: melpaBuild { pname = "yatex"; - version = "20180122.1744"; + version = "20180223.2345"; src = fetchhg { url = "https://www.yatex.org/hgrepos/yatex"; - rev = "b1896ef49747"; - sha256 = "1a8qc1krskl5qdy4fikilrrzrwmrghs4h1yaj5lclzywpc67zi8b"; + rev = "af4601ee3c6a"; + sha256 = "1r0irbkg8c5aapd1i7il31wv2fmhi0bzspiy21k670m896jqx50p"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/9854c39fc1889891fe460d0d5ac9224de3f6c635/recipes/yatex"; @@ -77824,8 +78125,8 @@ src = fetchFromGitHub { owner = "abingham"; repo = "emacs-ycmd"; - rev = "e21c99de8fd2992031adaa758df0d495e55d682a"; - sha256 = "1l9xsqlcqi25mdka806gz3h4y4x0dh00n6bajh3x908ayixjgf91"; + rev = "a35a2ddd911da6d3a926bdef2614a2898055a5e2"; + sha256 = "1nig77gqi74k01309r3nfy45ylhi5mj7ajxlhib6i58zlib8ycbl"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/4b25378540c64d0214797348579671bf2b8cc696/recipes/ycmd"; @@ -78040,12 +78341,12 @@ zenburn-theme = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "zenburn-theme"; - version = "20180123.59"; + version = "20180222.1757"; src = fetchFromGitHub { owner = "bbatsov"; repo = "zenburn-emacs"; - rev = "4b3e541721f52dbfa307e2cab3cd682e25987fdd"; - sha256 = "0x3b3dbkgpf9py7z3bf9629q3vqi303xp2hy7vi2qdfrnqn0600q"; + rev = "3a9ae671d01d9828b3e2935c80e8796cd3c1d77b"; + sha256 = "1kfwnwnnax22dlkc42rlw7lrdlpjxmh70sjnrrljpvi238scn5b2"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/091dcc3775ec2137cb61d66df4e72aca4900897a/recipes/zenburn-theme"; @@ -78438,12 +78739,12 @@ zotxt = callPackage ({ fetchFromGitLab, fetchurl, lib, melpaBuild, request-deferred }: melpaBuild { pname = "zotxt"; - version = "20170109.2040"; + version = "20180218.1053"; src = fetchFromGitLab { owner = "egh"; repo = "zotxt-emacs"; - rev = "1a010ea5db617269adc132e4cc028a44d9b629bd"; - sha256 = "10i5hq0mkb0b88n9lb40ad4d98fwv5inbdfiyxyrflvl4qj0q60r"; + rev = "5b3715bab55c9f17f134a8fada5b68c07aa66cad"; + sha256 = "1hz1m4190yi6knz3y088ql8wy3pmsl8lsznqby2vpnn9p74fvl37"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/b633453e77a719f6b6b6564e66c1c1260db38aa6/recipes/zotxt"; @@ -78480,11 +78781,11 @@ zpresent = callPackage ({ dash, emacs, fetchhg, fetchurl, lib, melpaBuild, org-parser, request }: melpaBuild { pname = "zpresent"; - version = "20180205.2109"; + version = "20180224.2212"; src = fetchhg { url = "https://bitbucket.com/zck/zpresent.el"; - rev = "53a247d2c21b"; - sha256 = "1a45l3i1gg0pyka13z6hra3wyp6x564cz66gbi10sqly2jlwgxda"; + rev = "e2e34c061ff5"; + sha256 = "00rj8lgp5b856csvlrin1vwas1109nmywbrnpny4qck4yghv6zqb"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3aae38ad54490fa650c832fb7d22e2c73b0fb060/recipes/zpresent"; @@ -78500,12 +78801,12 @@ ztree = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "ztree"; - version = "20180210.717"; + version = "20180215.1021"; src = fetchFromGitHub { owner = "fourier"; repo = "ztree"; - rev = "d078dafa74f4e2a001f1aeecf718c0716779d77e"; - sha256 = "1skhvq48f6pl1i53gaa1bplbwd1ik21a12vryby3gk3w5ccw3wng"; + rev = "67a1d90595353ab57fd424651c567df9851b9494"; + sha256 = "01qv400zp4bdfah62l3ixkc3kvkwrjj5ngc36m6w783q0zmr105r"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/f151e057c05407748991f23c021e94c178b87248/recipes/ztree"; @@ -78567,8 +78868,8 @@ src = fetchFromGitHub { owner = "mrkkrp"; repo = "zzz-to-char"; - rev = "8ddda49de3356d8fa0308d79b5d68272baf2c57b"; - sha256 = "17d8mmmgj2w4nm2nfg12g35i7zbp4bp47ix5ifqqm1zvwmbmzrqx"; + rev = "db8d9e660ad18a15159779efe34d7a98ef0df535"; + sha256 = "1wlzlhabq75iqrhg9p2xx8l7rnfzpcjjflxmgyhaxhq188bwrqk6"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/7063cbc1f1501ce81552d7ef1d42d1309f547c42/recipes/zzz-to-char"; diff --git a/pkgs/applications/editors/emacs-modes/melpa-stable-generated.nix b/pkgs/applications/editors/emacs-modes/melpa-stable-generated.nix index 148099d1005d..294414f15ee1 100644 --- a/pkgs/applications/editors/emacs-modes/melpa-stable-generated.nix +++ b/pkgs/applications/editors/emacs-modes/melpa-stable-generated.nix @@ -125,27 +125,6 @@ license = lib.licenses.free; }; }) {}; - ac-anaconda = callPackage ({ anaconda-mode, auto-complete, dash, fetchFromGitHub, fetchurl, lib, melpaBuild }: - melpaBuild { - pname = "ac-anaconda"; - version = "0.1.0"; - src = fetchFromGitHub { - owner = "proofit404"; - repo = "ac-anaconda"; - rev = "d0dec5c026235f65f9fd6594540df8886ed1b6a8"; - sha256 = "0vrd6g9cl02jjxrjxpshq4pd748b5xszhpmakywrw8s08nh8jf44"; - }; - recipeFile = fetchurl { - url = "https://raw.githubusercontent.com/milkypostman/melpa/0eb23a75c8b57b4af1737c0508f03e66430e6076/recipes/ac-anaconda"; - sha256 = "124nvigk6y3iw0lj2r7div88rrx8vz59xwqph1063jsrc29x8rjf"; - name = "ac-anaconda"; - }; - packageRequires = [ anaconda-mode auto-complete dash ]; - meta = { - homepage = "https://melpa.org/#/ac-anaconda"; - license = lib.licenses.free; - }; - }) {}; ac-cake = callPackage ({ auto-complete, cake, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "ac-cake"; @@ -2023,15 +2002,36 @@ license = lib.licenses.free; }; }) {}; + aurora-config-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "aurora-config-mode"; + version = "0.0.2"; + src = fetchFromGitHub { + owner = "bdd"; + repo = "aurora-config-mode.el"; + rev = "0a7ca7987c3a0824e25470389c7d25c337a81593"; + sha256 = "0ns1xhpk1awbj3kv946dv11a99p84dhm54vjk72kslxwx42nia28"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/10a44bed8edee646bf68abf7dffbe352a137a278/recipes/aurora-config-mode"; + sha256 = "1hpjwidqmjxanijsc1imc7ww9abbylmkin1p0846fbz1hz3a603c"; + name = "aurora-config-mode"; + }; + packageRequires = []; + meta = { + homepage = "https://melpa.org/#/aurora-config-mode"; + license = lib.licenses.free; + }; + }) {}; auth-password-store = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, password-store, seq }: melpaBuild { pname = "auth-password-store"; - version = "2.0.0"; + version = "3.0.0"; src = fetchFromGitHub { owner = "DamienCassou"; repo = "auth-password-store"; - rev = "5ca6a838489c1175de3df7af025751559eb13cb3"; - sha256 = "10y6grxwp8sw24fv8i9f50lc83qcdxnkw2bm1v983fw6di4i3a8w"; + rev = "6af0458a6b586cc5004fa652f23615433304924d"; + sha256 = "150cx8ida9bl0g84iq051rziy64ic2pxz6hn0blsys1qcp9lf8wa"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/0f4d2a28373ba93da5b280ebf40c5a3fa758ea11/recipes/auth-password-store"; @@ -3247,22 +3247,22 @@ license = lib.licenses.free; }; }) {}; - buffer-flip = callPackage ({ fetchFromGitHub, fetchurl, key-chord, lib, melpaBuild }: + buffer-flip = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "buffer-flip"; - version = "1.2"; + version = "2.0"; src = fetchFromGitHub { owner = "killdash9"; repo = "buffer-flip.el"; - rev = "386067141ca77848b266e068f8c6baf6b4c2ab5b"; - sha256 = "1bch4jk6d60aydvcc624026pwfby29fbcwm3zhrsksqc0d2qxdwq"; + rev = "868aa9e04438d57746e0b1f5a13bcb9b64061c05"; + sha256 = "0b069g89b34s76ds3axmpiwl924fjd1jh6z6fdw5x0h0lj20pa87"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3924870cac1392a7eaeeda34b92614c26c674d63/recipes/buffer-flip"; sha256 = "0ka9ynj528yp1p31hbhm89627v6dpwspybly806n92vxavxrn098"; name = "buffer-flip"; }; - packageRequires = [ key-chord ]; + packageRequires = []; meta = { homepage = "https://melpa.org/#/buffer-flip"; license = lib.licenses.free; @@ -3502,12 +3502,12 @@ buttercup = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "buttercup"; - version = "1.9"; + version = "1.11"; src = fetchFromGitHub { owner = "jorgenschaefer"; repo = "emacs-buttercup"; - rev = "18a887957b0e22d3cc8873796bd27f06b2493a03"; - sha256 = "0y0wg0yqmvqjyhjs4dx8yw44hl19k227krd9mds220w0dx8wmhay"; + rev = "8d27bb99463bc230a76dee96378dd337622988f5"; + sha256 = "0s5vfzcfsiqb6bc6jh95a2dyy23b4bvhdpzn2fcq8awldbpx51fh"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/d4b187cb5b3cc5b546bfa6b94b6792e6363242d1/recipes/buttercup"; @@ -3775,12 +3775,12 @@ caml = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "caml"; - version = "4.6.1pre2"; + version = "4.6.1"; src = fetchFromGitHub { owner = "ocaml"; repo = "ocaml"; - rev = "b057bd0758f63f41fd8853ee025c58368e33ed21"; - sha256 = "1s066clvar4ws0mingh68jrj87dak52grs8mnd2ibcf1kf21w08q"; + rev = "81dc8e8fcf923baa5e5208f9bc4228930c7c3d56"; + sha256 = "0pn25c3v8xnihnyzk1w297ci5ca05hcdv46m21522sgpcinbvkc7"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/d5a3263cdcc229b11a3e96edbf632d56f32c47aa/recipes/caml"; @@ -3838,12 +3838,12 @@ cask = callPackage ({ cl-lib ? null, dash, epl, f, fetchFromGitHub, fetchurl, lib, melpaBuild, package-build, s, shut-up }: melpaBuild { pname = "cask"; - version = "0.8.2"; + version = "0.8.3"; src = fetchFromGitHub { owner = "cask"; repo = "cask"; - rev = "afdd191b97e76c8393f656336699419a2b39ca1a"; - sha256 = "10qiapg6kp890q8n2pamvnnpxwcgcldw20mp23pmwzh9nsvqrpbs"; + rev = "ccfe38ae133cc843865f87607d3f4f3960b76870"; + sha256 = "1bv0lganh5xhjp2r84js596p1sqndvxnhn3q6l7m7lcdxrjckcy8"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/b86c666ee9b0620390a250dddd42b17cbec2409f/recipes/cask"; @@ -4772,12 +4772,12 @@ cmake-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "cmake-mode"; - version = "3.10.2"; + version = "3.11.0pre1"; src = fetchFromGitHub { owner = "Kitware"; repo = "CMake"; - rev = "c1e087a9d3af74299d7681c9f9de59e5977a1539"; - sha256 = "08qw6kq3l7dv37s5mppqxb6ys22h733k0qh2llzk2430wv5y9crk"; + rev = "02edf08be2b9476f442b702c6c00447912425cc2"; + sha256 = "1ppq3g1525izfl4d8779rj6lq8jkgqh50wnbyb0cmj6bp7b7c9sz"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/598723893ae4bc2e60f527a072efe6ed9d4e2488/recipes/cmake-mode"; @@ -5087,12 +5087,12 @@ company = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "company"; - version = "0.9.4"; + version = "0.9.6"; src = fetchFromGitHub { owner = "company-mode"; repo = "company-mode"; - rev = "a197b072dc93dbad238f1dc70da01e3775ebfb56"; - sha256 = "0is65adahvfgfjamnr8dmnh5xnijcwzhbzsvvi6ixkkfm2xvs5aa"; + rev = "4711695af3df93f1bbceee165c505fea5bfc49ac"; + sha256 = "0x8zwq88k85ikzr0klm6nfa6i1wbykzfa790cg9cmi7wrsywimm1"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/96e7b4184497d0d0db532947f2801398b72432e4/recipes/company"; @@ -5399,22 +5399,22 @@ license = lib.licenses.free; }; }) {}; - company-lsp = callPackage ({ company, emacs, fetchFromGitHub, fetchurl, lib, lsp-mode, melpaBuild, s }: + company-lsp = callPackage ({ company, dash, emacs, fetchFromGitHub, fetchurl, lib, lsp-mode, melpaBuild, s }: melpaBuild { pname = "company-lsp"; - version = "1.0.0"; + version = "2.0.1"; src = fetchFromGitHub { owner = "tigersoldier"; repo = "company-lsp"; - rev = "86fda23d29b732ba3987bf20901034da1515b077"; - sha256 = "068lg2yrpnzq8cg73irnx7i41giww7m0ysnl2inc7hikhmm3a95y"; + rev = "4512d062c38922d8b8cf402ca6043c246e915694"; + sha256 = "0q95lgw02qy5dn3vpdhspmvjhnfzmmn2asajaf15q5lkjbsvxfrk"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/5125f53307c1af3d9ccf2bae3c25e7d23dfe1932/recipes/company-lsp"; sha256 = "09nbi6vxw8l26gfgsc1k3bx4m8i1px1b0jxaywszky5bv4fdy03l"; name = "company-lsp"; }; - packageRequires = [ company emacs lsp-mode s ]; + packageRequires = [ company dash emacs lsp-mode s ]; meta = { homepage = "https://melpa.org/#/company-lsp"; license = lib.licenses.free; @@ -6059,12 +6059,12 @@ counsel-etags = callPackage ({ counsel, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "counsel-etags"; - version = "1.3.9"; + version = "1.4.1"; src = fetchFromGitHub { owner = "redguardtoo"; repo = "counsel-etags"; - rev = "2219bf8d9a4584abc905c7470455777553496056"; - sha256 = "0kcxcbf1rm7cm74s5z87pv0bflx42h4j2lnb8b3r0nznj94ywnj3"; + rev = "9d70490b551503aac22241c8089a46e55dd3deba"; + sha256 = "03yr0y3z0jgh8c1db43nq0888rr561f6ks5fmf254aibh63schff"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/87528349a3ab305bfe98f30c5404913272817a38/recipes/counsel-etags"; @@ -6728,22 +6728,22 @@ license = lib.licenses.free; }; }) {}; - dart-mode = callPackage ({ cl-lib ? null, dash, fetchFromGitHub, fetchurl, flycheck, lib, melpaBuild }: + dart-mode = callPackage ({ cl-lib ? null, dash, emacs, fetchFromGitHub, fetchurl, flycheck, lib, melpaBuild, s }: melpaBuild { pname = "dart-mode"; - version = "0.15"; + version = "1.0.3"; src = fetchFromGitHub { owner = "nex3"; repo = "dart-mode"; - rev = "e6635b390235cf16a8081763768cf925ca2d9133"; - sha256 = "1cwwwxmv7d1blv88c6nlm0z94gjfdgw2ri1libzyfzirincyicdx"; + rev = "f3a7c7b71fb12d02fa02700bc10426cb10010d01"; + sha256 = "1g0c37qfqki7v1a5rxf6sy7k07i529rw3f1wmjl7g1zhd9bwsml2"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/dart-mode"; sha256 = "00zvgxfxgk5jair796l6appyq5hc7hs2s2wglv1j4l7g50b05cla"; name = "dart-mode"; }; - packageRequires = [ cl-lib dash flycheck ]; + packageRequires = [ cl-lib dash emacs flycheck s ]; meta = { homepage = "https://melpa.org/#/dart-mode"; license = lib.licenses.free; @@ -7571,12 +7571,12 @@ direnv = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, with-editor }: melpaBuild { pname = "direnv"; - version = "1.2.1"; + version = "1.3.0"; src = fetchFromGitHub { owner = "wbolster"; repo = "emacs-direnv"; - rev = "3c632dd1fdf0ad1edb6d9b0a4a09cdbb420c27aa"; - sha256 = "0jajqf7ad0x6ca7i051svrc37mr3ww8pvd1832i0k7nf3i8cv867"; + rev = "5b55dac12467689083ff995777f54a304ff47be1"; + sha256 = "0sjrnab8rx1bpnxim268b8jfpyh8h0iy3j38925r0jqjgjb19ksn"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/5419809ee62b920463e359c8e1314cd0763657c1/recipes/direnv"; @@ -7914,12 +7914,12 @@ doom-themes = callPackage ({ all-the-icons, cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "doom-themes"; - version = "2.1.0"; + version = "2.1.1"; src = fetchFromGitHub { owner = "hlissner"; repo = "emacs-doom-themes"; - rev = "bc747b3b65baf737f99dc4ccf68558581958bbba"; - sha256 = "0j5aywwh8cw0bb55frrpmyfmbzg6d6jv29ys61p1xf49gvki870m"; + rev = "98120f9b362b53983e932f126cf92848297b745a"; + sha256 = "03pnnbqa09iqyypgbgwlkxr6w1j46rla6pivbq7fy366yk2x03x0"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/c5084bc2c3fe378af6ff39d65e40649c6359b7b5/recipes/doom-themes"; @@ -8103,12 +8103,12 @@ dtrt-indent = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "dtrt-indent"; - version = "0.5"; + version = "0.6"; src = fetchFromGitHub { owner = "jscheid"; repo = "dtrt-indent"; - rev = "a87d3d9cf8d4d8cb6f108004e425f9a557683b75"; - sha256 = "0dia1xc8mng9bg987cpnhr2lciw4qbqsvzs4ayakrqfl2g3ny2qn"; + rev = "3ea5136bde1240f93fbf3ce30fffc4f279a58d27"; + sha256 = "0lkc8y09lhlpg7vrn2459c5fxn0nvxbzqhwadmkgc046i3aapqpg"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/61bcbcfa6c0f38a1d87f5b6913b8be6c50ef2994/recipes/dtrt-indent"; @@ -8522,12 +8522,12 @@ ebib = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, parsebib, seq }: melpaBuild { pname = "ebib"; - version = "2.11.6"; + version = "2.11.8"; src = fetchFromGitHub { owner = "joostkremers"; repo = "ebib"; - rev = "9e5f3377a5e9c6956300de3872c89cd902c2cfc6"; - sha256 = "0rklwdz3d2b065yhhiz7bhyfb3fsg9rcqi6d4rhk7wb8w849vf20"; + rev = "fb43f9354f9f9c4c65091ae15732b1d941475186"; + sha256 = "16l6l2qpkq10wkd95vbch2f7qcsb0jw4rjdf0gck2q8si8i2xi9h"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/4e39cd8e8b4f61c04fa967def6a653bb22f45f5b/recipes/ebib"; @@ -9160,12 +9160,12 @@ elbank = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, seq }: melpaBuild { pname = "elbank"; - version = "1.1"; + version = "1.2"; src = fetchFromGitHub { owner = "NicolasPetton"; repo = "Elbank"; - rev = "245cbc218e94793909ecede2e0d360c7d86f3122"; - sha256 = "1qcxh8v5dj2wcxxs3qcdny00p906nj33wsxyswwa4jbhh2vfxz12"; + rev = "f494716105b1a9f4f52f43bc3dd37c9cd0309bf5"; + sha256 = "0bvx6nq0gjjbjs0mzd1x1ajyjpa181z0n4kv4aknh3is210gbpbb"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/05d252ee84adae2adc88fd325540f76b6cdaf010/recipes/elbank"; @@ -9304,6 +9304,27 @@ license = lib.licenses.free; }; }) {}; + elisp-lint = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "elisp-lint"; + version = "0.2.0"; + src = fetchFromGitHub { + owner = "gonewest818"; + repo = "elisp-lint"; + rev = "9d894e99377859171ee54cb7d2b2e7f2cc7c267c"; + sha256 = "11pvqskjhxxsyxmy8wllqwa0qg0j9280h0m5rzjghgsdcnlisyvq"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/61595c78ac7f15eef47bf28636ad796f74741509/recipes/elisp-lint"; + sha256 = "13cxcn0qp63f2nkv37c3w47dby9cqm4l1f8xilgpczdaxd86kd63"; + name = "elisp-lint"; + }; + packageRequires = [ emacs ]; + meta = { + homepage = "https://melpa.org/#/elisp-lint"; + license = lib.licenses.free; + }; + }) {}; elisp-refs = callPackage ({ dash, f, fetchFromGitHub, fetchurl, lib, list-utils, loop, melpaBuild, s }: melpaBuild { pname = "elisp-refs"; @@ -10465,12 +10486,12 @@ erlang = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "erlang"; - version = "20.2.2"; + version = "20.2.4"; src = fetchFromGitHub { owner = "erlang"; repo = "otp"; - rev = "194513197e19cd592f3f5c2231510542f5193fe4"; - sha256 = "1cns1qcmmr00nyvcvcj4p4n2gvliyjynlwfqc7qzpkjjnkb7fzl6"; + rev = "13c6a4bf01d39a5002e09ef1f82619cde9f2c90c"; + sha256 = "1j8fqzaw36j8naafrrq1s329jlvlb06ra1f03hl76xr0bbxm44ks"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/d9cd526f43981e0826af59cdc4bb702f644781d9/recipes/erlang"; @@ -11679,6 +11700,27 @@ license = lib.licenses.free; }; }) {}; + evil-swap-keys = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "evil-swap-keys"; + version = "1.0.0"; + src = fetchFromGitHub { + owner = "wbolster"; + repo = "evil-swap-keys"; + rev = "56bc201e265a6bd482a7c41a7c81d2238341ef3a"; + sha256 = "0n0hl0plaghz9rjssabxwfzm46kr6564hpfh6hn8lzla4rf1q5zs"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/2abff8e3d54ac13c4fe90692a56437844accca25/recipes/evil-swap-keys"; + sha256 = "12cx95mjm4ymggidvf41gh3a364z32h655jmhk417v0ga9jk9fv6"; + name = "evil-swap-keys"; + }; + packageRequires = [ emacs ]; + meta = { + homepage = "https://melpa.org/#/evil-swap-keys"; + license = lib.licenses.free; + }; + }) {}; evil-test-helpers = callPackage ({ evil, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "evil-test-helpers"; @@ -12415,12 +12457,12 @@ find-file-in-project = callPackage ({ emacs, fetchFromGitHub, fetchurl, ivy, lib, melpaBuild }: melpaBuild { pname = "find-file-in-project"; - version = "5.4.7"; + version = "5.5.2"; src = fetchFromGitHub { owner = "technomancy"; repo = "find-file-in-project"; - rev = "7be14de3c737e70606d208d8d443b89e58cd646d"; - sha256 = "1sdnyqv69mipbgs9yax88m9b6crsa59rjhwrih197pifl4089awr"; + rev = "aba912a73d1f3fcff0d184b49008a2fa1655ad7e"; + sha256 = "145n04lid9alrm8nl6gfnll75jz1ssli48pbsc9zyva00ryk83my"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/cae2ac3513e371a256be0f1a7468e38e686c2487/recipes/find-file-in-project"; @@ -12734,6 +12776,27 @@ license = lib.licenses.free; }; }) {}; + flower = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "flower"; + version = "0.3.6"; + src = fetchFromGitHub { + owner = "PositiveTechnologies"; + repo = "flower"; + rev = "2c89a7b0bc9d7b2e95d98e159a059d41ae43933f"; + sha256 = "1ilj0wa53qs8863d7ri9k8m57jd4n2zm3ijs3s2i7fn8a3svmmhy"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/c8a731715d360aea9af2b898242fd4eee5419d14/recipes/flower"; + sha256 = "1cb9ppgspdrg4yrrlq4sfajpa6s7xiwvdf9b3947rmmxizgqgynd"; + name = "flower"; + }; + packageRequires = []; + meta = { + homepage = "https://melpa.org/#/flower"; + license = lib.licenses.free; + }; + }) {}; flx = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "flx"; @@ -14246,15 +14309,36 @@ license = lib.licenses.free; }; }) {}; + fortune-cookie = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "fortune-cookie"; + version = "1.0.0"; + src = fetchFromGitHub { + owner = "andschwa"; + repo = "fortune-cookie"; + rev = "bad99a2cd090f6646c7ee1125b95dd98744939c6"; + sha256 = "1kiflisiabc39lxi5hcazfvcwrpasl01lqsi2sri6pyrcrjyh8mf"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/ab0d56626c9bf847c693b4d9ddb08acee636054f/recipes/fortune-cookie"; + sha256 = "0xg0zk7hnyhnbhqpxnzrgqs5yz0sy6wb0n9982qc0pa6jqnl9z78"; + name = "fortune-cookie"; + }; + packageRequires = []; + meta = { + homepage = "https://melpa.org/#/fortune-cookie"; + license = lib.licenses.free; + }; + }) {}; fountain-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "fountain-mode"; - version = "2.4.2"; + version = "2.5.0"; src = fetchFromGitHub { owner = "rnkn"; repo = "fountain-mode"; - rev = "e2878da13e7b87a824ebd6c842e9f552369b220c"; - sha256 = "091c8scwdxfrg710d1rkqad6l2y8hiw8f5jg4ayvrjm7d0s29hsa"; + rev = "ee20f7a3bcb86b661a38480acf853c1da2db6d26"; + sha256 = "0y7ji7p3blgzbwsz434346g835hzjs896hd7jli1ig0b9b0l43my"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/913386ac8d5049d37154da3ab32bde408a226511/recipes/fountain-mode"; @@ -14467,12 +14551,12 @@ futhark-mode = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "futhark-mode"; - version = "0.3.0"; + version = "0.3.1"; src = fetchFromGitHub { owner = "HIPERFIT"; repo = "futhark"; - rev = "81b858a79b29622a1db732f97225cad705c4acf5"; - sha256 = "04zxal7j58whcy384sscwc7npcqdjlq01jjjn0i35pf2v7r045xy"; + rev = "631c493b97b3e2f928892fb25fa29daca4927f83"; + sha256 = "1a6qr5r62q84m1jcs1xj36p7jr9c042gh38lb7cmfcxf2x693h68"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/0607f01aad7e77d53595ad8db95d32acfd29b148/recipes/futhark-mode"; @@ -14874,8 +14958,8 @@ sha256 = "194nf5kjkxgxqjmxlr9q6r4p9kxcsm9qx8pcagxbhvmfyh6km71h"; }; recipeFile = fetchurl { - url = "https://raw.githubusercontent.com/milkypostman/melpa/d5db83957187c9b65f697eba7e4c3320567cf4ab/recipes/ghub"; - sha256 = "15kjyi8ialpr1zjqvw68w9pa5sigcwy2szq21yvcy295z7ylzy4i"; + url = "https://raw.githubusercontent.com/milkypostman/melpa/70a4dbd62fd6ebb4e056d0e97fa1a958437ddc91/recipes/ghub"; + sha256 = "031bzp61aal2id5sazwjz30svydjvxvphw5wbv5cyy4dqyh7w2ps"; name = "ghub"; }; packageRequires = [ emacs ]; @@ -15556,27 +15640,6 @@ license = lib.licenses.free; }; }) {}; - glab = callPackage ({ emacs, fetchFromGitLab, fetchurl, lib, melpaBuild }: - melpaBuild { - pname = "glab"; - version = "1.1.1"; - src = fetchFromGitLab { - owner = "tarsius"; - repo = "glab"; - rev = "5ced0214622450930bcea105b9aac785c594609d"; - sha256 = "100lz4dqn9ggvlvdrp909cy44br9hnlaa62pj0kp1vdqqxfxwfyn"; - }; - recipeFile = fetchurl { - url = "https://raw.githubusercontent.com/milkypostman/melpa/9375cbae3ffe5bf4ba5606358860050f3005d9b7/recipes/glab"; - sha256 = "0z34kzly39mdqsyqpi3n5m3189g0d7lsvk2ksmh46zdziak715di"; - name = "glab"; - }; - packageRequires = [ emacs ]; - meta = { - homepage = "https://melpa.org/#/glab"; - license = lib.licenses.free; - }; - }) {}; gmail-message-mode = callPackage ({ fetchFromGitHub, fetchurl, ham-mode, lib, melpaBuild }: melpaBuild { pname = "gmail-message-mode"; @@ -16536,12 +16599,12 @@ green-is-the-new-black-theme = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "green-is-the-new-black-theme"; - version = "0.0.3"; + version = "0.0.4"; src = fetchFromGitHub { owner = "fredcamps"; repo = "green-is-the-new-black-emacs"; - rev = "b9cdecd04691311c30c94ad4ec81124e63b9b122"; - sha256 = "124q733rirc8a2d9xfparphcjrrbxhp4wxf070l8hqp3p2764bka"; + rev = "374d14b99f4959fa039c0e1ce8e0e7991b726d98"; + sha256 = "135w5vwbk2468b82v6icc8nh50d9flpi7zd63xch8vpvsri0vpw0"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3e42528d5677fd90515cad47266c07ea3d4363fb/recipes/green-is-the-new-black-theme"; @@ -17226,12 +17289,12 @@ helm = callPackage ({ async, emacs, fetchFromGitHub, fetchurl, helm-core, lib, melpaBuild, popup }: melpaBuild { pname = "helm"; - version = "2.8.8"; + version = "2.9.0"; src = fetchFromGitHub { owner = "emacs-helm"; repo = "helm"; - rev = "5b7237acc11ed0fbee10af9cf6345da7c3d9dd26"; - sha256 = "18ay4c5mvr5b5i8qfn1h75yy5znzm1l6h5rhhzhhaiidvb2arr69"; + rev = "3dda0089ace4696cd5cfd397d5f5710fd3374e69"; + sha256 = "1r7jwp3l0n77zxvsl3h0rf4jff2ah0kpn3cgxyinl98js95w8fgy"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/7e8bccffdf69479892d76b9336a4bec3f35e919d/recipes/helm"; @@ -17541,12 +17604,12 @@ helm-company = callPackage ({ company, fetchFromGitHub, fetchurl, helm, lib, melpaBuild }: melpaBuild { pname = "helm-company"; - version = "0.2.0"; + version = "0.2.2"; src = fetchFromGitHub { owner = "Sodel-the-Vociferous"; repo = "helm-company"; - rev = "ae4e1a05455f5eaf07e61b8627934ea1df4eb048"; - sha256 = "05lfqdg5pzwji3j5w1l892qab9nffd3if8ha0545gbxfn94lnx90"; + rev = "acc9c7901e094c1591327a0db1ec7a439f67a84d"; + sha256 = "1d4q9clp0q56br80c21a4wz1gc4jw3mdy97z9mq07x9i8rhlppzs"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/8acf7420f2ac8a36474594bc34316f187b43d771/recipes/helm-company"; @@ -17562,12 +17625,12 @@ helm-core = callPackage ({ async, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "helm-core"; - version = "2.8.8"; + version = "2.9.0"; src = fetchFromGitHub { owner = "emacs-helm"; repo = "helm"; - rev = "5b7237acc11ed0fbee10af9cf6345da7c3d9dd26"; - sha256 = "18ay4c5mvr5b5i8qfn1h75yy5znzm1l6h5rhhzhhaiidvb2arr69"; + rev = "3dda0089ace4696cd5cfd397d5f5710fd3374e69"; + sha256 = "1r7jwp3l0n77zxvsl3h0rf4jff2ah0kpn3cgxyinl98js95w8fgy"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/ef7a700c5665e6d72cb4cecf7fb5a2dd43ef9bf7/recipes/helm-core"; @@ -18654,12 +18717,12 @@ helm-swoop = callPackage ({ emacs, fetchFromGitHub, fetchurl, helm, lib, melpaBuild }: melpaBuild { pname = "helm-swoop"; - version = "1.7.2"; + version = "1.7.4"; src = fetchFromGitHub { owner = "ShingoFukuyama"; repo = "helm-swoop"; - rev = "6d3fdcfb6dea06242efc8ff4cafff9917e558bfc"; - sha256 = "1pjpzccviz95zgl86yw2xda7lhlsfdddf8la8di8rka8sz79nw72"; + rev = "c66336b8245ddc51c4206f19c119f1081920985c"; + sha256 = "0b23j1bkpg4pm310hqdhgnl4mxsj05gpl08b6kb2ja4fzrg6adsk"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/helm-swoop"; @@ -20334,12 +20397,12 @@ indium = callPackage ({ company, emacs, fetchFromGitHub, fetchurl, js2-mode, lib, melpaBuild, seq, websocket }: melpaBuild { pname = "indium"; - version = "1.1.0"; + version = "1.2.0"; src = fetchFromGitHub { owner = "NicolasPetton"; repo = "Indium"; - rev = "c15f5a2b4a48fd53b446e0fa291bdb8323b80c27"; - sha256 = "07fzsjmbbq4nx2w23pbb0z88iqmclm156yd87nxsdivndmzvsgw2"; + rev = "5ece767ea30a350dcdb1a4defaca174e85efedc5"; + sha256 = "1djkzjxv7idqg5pmbqf60lmvibp3ccvgdkdwb48wzn2yvnqr2vw6"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/4292058cc6e31cabc0de575134427bce7fcef541/recipes/indium"; @@ -21843,12 +21906,12 @@ kaolin-themes = callPackage ({ autothemer, cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "kaolin-themes"; - version = "1.3.0"; + version = "1.3.1"; src = fetchFromGitHub { owner = "ogdenwebb"; repo = "emacs-kaolin-themes"; - rev = "d730208cff185ee86a81f8a5a6feadfea78ab9cc"; - sha256 = "0xfb8zi6jvwdivklc3lk5dzf8nnx05pm4fip44s4al6ajns8hgya"; + rev = "8a229fcd1d73876920a063f0eba906a5080275a7"; + sha256 = "0w35862sjyizj7grb9ixjns8kpxq2wgdgn1n06jdhmnnaqdyq911"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/043a4e3bd5301ef8f4df2cbda0b3f4111eb399e4/recipes/kaolin-themes"; @@ -22575,6 +22638,27 @@ license = lib.licenses.free; }; }) {}; + line-up-words = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "line-up-words"; + version = "1.0.0"; + src = fetchFromGitHub { + owner = "janestreet"; + repo = "line-up-words"; + rev = "54d2c51c1c3da7e06be47b829bf465bf467ab53f"; + sha256 = "0qda9i5yjjf2x5cpg6nxkzqwa8fzzjxk0yyc4295kbawwd83vglr"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/28ac7764a19fee2e1e2a89d95569815f1940c5e4/recipes/line-up-words"; + sha256 = "0agsrrkwwfmbiy4z3g4hkrpfr3nqgd5lwfn18qrdxynijd5rqs79"; + name = "line-up-words"; + }; + packageRequires = []; + meta = { + homepage = "https://melpa.org/#/line-up-words"; + license = lib.licenses.free; + }; + }) {}; lingr = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "lingr"; @@ -23025,12 +23109,12 @@ logview = callPackage ({ datetime, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "logview"; - version = "0.8.2"; + version = "0.9"; src = fetchFromGitHub { owner = "doublep"; repo = "logview"; - rev = "72b6c5349206172a146b2c730b8ac040a92ebc3f"; - sha256 = "1f93iyxf8v0jazzh6jljrm7r28z00nn14wr90qrh9y9chyq72n63"; + rev = "9ec279d933923dab2d8d1f140adc43073dab6433"; + sha256 = "1qhzs75pxnaksbhczmpdcy2zmrqavlzkzss7ik5nv2wf9vs0sn02"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/1df3c11ed7738f32e6ae457647e62847701c8b19/recipes/logview"; @@ -23214,12 +23298,12 @@ magic-filetype = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, s }: melpaBuild { pname = "magic-filetype"; - version = "0.2.1"; + version = "0.3.0"; src = fetchFromGitHub { owner = "emacs-php"; repo = "magic-filetype.el"; - rev = "0dfe3d9e0e22c7b06e34c8338f110e337306e3fd"; - sha256 = "1yjn2w0ykczhlj4q3dnfw2z4q66201dn3jz31yw7hh8bxjlsvwfh"; + rev = "019494add5ff02dd36cb3f500142fc51125522cc"; + sha256 = "1hw77d4wgqrms8rvkv3xd50v4y9qjvm7cpz5rkgmvizs34pjqy22"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/eb13cb0dba1696cc51132cd1ff723fa17f892a7c/recipes/magic-filetype"; @@ -24068,12 +24152,12 @@ meghanada = callPackage ({ company, emacs, fetchFromGitHub, fetchurl, flycheck, lib, melpaBuild, yasnippet }: melpaBuild { pname = "meghanada"; - version = "0.9.0"; + version = "0.9.2"; src = fetchFromGitHub { owner = "mopemope"; repo = "meghanada-emacs"; - rev = "98ad6a5361c725319a355522d2d1ba0e0fbb7cde"; - sha256 = "06iryz4dbldc9vxy67g977hih8r1bfvjld53lvwnjsc7r3x9i07q"; + rev = "ca20c57c9c389d4dd9fe88d9a3da33d5af78e4d0"; + sha256 = "1k9dpvvz7qcscq9z76xvsas96lj0xsnp725z3w97sahqsi0sdxq8"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/4c75c69b2f00be9a93144f632738272c1e375785/recipes/meghanada"; @@ -25620,12 +25704,12 @@ nix-buffer = callPackage ({ emacs, f, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "nix-buffer"; - version = "3.0.1"; + version = "3.1.1"; src = fetchFromGitHub { owner = "shlevy"; repo = "nix-buffer"; - rev = "749f48b510d0fd47dac67850f4089119fbff142a"; - sha256 = "1iav1s2vc2ivkah9v42961vpk74z8961ybyxq0cnswzjb1xi5n25"; + rev = "db57cda36e7477bdc7ef5a136357b971b1d4d099"; + sha256 = "0b01b4l9c70sad5r5py5hvg7s6k6idwwp0pv3rn8rj0fq5wlyixj"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/08b978724ff26b3ea7a134d307d888c80e2a92a9/recipes/nix-buffer"; @@ -27076,12 +27160,12 @@ org-mime = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "org-mime"; - version = "0.0.9"; + version = "0.1.1"; src = fetchFromGitHub { owner = "org-mime"; repo = "org-mime"; - rev = "62791db188fa6a9a6b4e53c5c29fb4fa46582b98"; - sha256 = "1l1fyyyyyi8nj4vpkyhpvz1yyqa2vn7042kp9443kqcswdfc9660"; + rev = "0752659f7a19cead182584fabc9544464f69b83e"; + sha256 = "06lay5w03ah3w156spgh4bv2ma4x42pyhr3glfxw7vplfr5klvfz"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/521678fa13884dae69c2b4b7a2af718b2eea4b28/recipes/org-mime"; @@ -27398,6 +27482,27 @@ license = lib.licenses.free; }; }) {}; + org-rich-yank = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "org-rich-yank"; + version = "0.1.1"; + src = fetchFromGitHub { + owner = "unhammer"; + repo = "org-rich-yank"; + rev = "ffa90b29604e27a60ad341c06d0e43769af19715"; + sha256 = "1z9137nirbaydqpw5b7ii3qnpn09v1kiqnyxsxkgc0q3arb1m1f6"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/1261823d88459b6ac42d6c55c157a326173663df/recipes/org-rich-yank"; + sha256 = "1v0sc90g5sl6b9ylxbk2y8s3pvxkf4v7k2rkzpgpbp4nrq0miy4y"; + name = "org-rich-yank"; + }; + packageRequires = [ emacs ]; + meta = { + homepage = "https://melpa.org/#/org-rich-yank"; + license = lib.licenses.free; + }; + }) {}; org-static-blog = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "org-static-blog"; @@ -27671,22 +27776,22 @@ license = lib.licenses.free; }; }) {}; - org-wild-notifier = callPackage ({ alert, dash, fetchFromGitHub, fetchurl, lib, melpaBuild, org }: + org-wild-notifier = callPackage ({ alert, dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "org-wild-notifier"; - version = "0.2.2"; + version = "0.2.4"; src = fetchFromGitHub { owner = "akhramov"; repo = "org-wild-notifier.el"; - rev = "28f6af12a9efbcab53e310363c451f53ce8ea3f2"; - sha256 = "00v4f26np4i947xgqr03wylz4ichc168znlwxn4l6np1s85i3mzb"; + rev = "5da63fc00db20b60eb46a241cc8308547d85b3ad"; + sha256 = "1269az078d6d0x7ims2qa6wdv8ql2hn70fwigfqw116v9602ywjr"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/114552a24f73f13b253e3db4885039b680f6ef33/recipes/org-wild-notifier"; sha256 = "1lmpa614jnkpmfg3m1d2wjn9w0zig3gwd02n3dyjn23n71fiyhkp"; name = "org-wild-notifier"; }; - packageRequires = [ alert dash org ]; + packageRequires = [ alert dash emacs ]; meta = { homepage = "https://melpa.org/#/org-wild-notifier"; license = lib.licenses.free; @@ -27788,12 +27893,12 @@ orgit = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, magit, melpaBuild, org }: melpaBuild { pname = "orgit"; - version = "1.4.1"; + version = "1.5.0"; src = fetchFromGitHub { owner = "magit"; repo = "orgit"; - rev = "022687eb02f0bf0d0151d0ad917b165bfef2d663"; - sha256 = "1cddyns82a06ydbw8rhxzghkjav5vxmmc671pdnai50mql3cx9kf"; + rev = "976f3c7d25ad92c57341b52dad9af89b49c37f0c"; + sha256 = "0m8mghh0iydbvlsrg0zd2xajfhdxgxk79dm4gwircrh6zv8194ax"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/73b5f7c44c90540e4cbdc003d9881f0ac22cc7bc/recipes/orgit"; @@ -28250,12 +28355,12 @@ package-build = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "package-build"; - version = "1.1"; + version = "1.2"; src = fetchFromGitHub { owner = "melpa"; repo = "package-build"; - rev = "940c991ccd0dab53bd7c120601b3db35669c5e73"; - sha256 = "18yr4qq3jyf9zhlwqrbfq616svsgn5spnj0s4gsni7kb2ijjh2bp"; + rev = "d6f926e3688d1c8d3c9d06cbfdd5a31f85accf00"; + sha256 = "072dlzskl0w4xcnrzgy36gzn4sla4hw84yr82rv04akb9mg4ya9m"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/948fb86b710aafe6bc71f95554655dfdfcab0cca/recipes/package-build"; @@ -30979,6 +31084,34 @@ license = lib.licenses.free; }; }) {}; + python-pytest = callPackage ({ dash, dash-functional, emacs, fetchFromGitHub, fetchurl, lib, magit-popup, melpaBuild, projectile, s }: + melpaBuild { + pname = "python-pytest"; + version = "0.2.2"; + src = fetchFromGitHub { + owner = "wbolster"; + repo = "emacs-python-pytest"; + rev = "0ed385f7e8edd1a7d0aee72f5112459ea9054cbe"; + sha256 = "1wpvgx8ldrnq0pjr8iq65f3m0kmh1c9hnv1lkrgrglqazs2c6hbm"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/d95442748827911e082a55f4fd7c348a3757e274/recipes/python-pytest"; + sha256 = "0n97akqq7dss7rsww311ljh9w1hyc4j64wjmpxjlc9lg5aqwjbh4"; + name = "python-pytest"; + }; + packageRequires = [ + dash + dash-functional + emacs + magit-popup + projectile + s + ]; + meta = { + homepage = "https://melpa.org/#/python-pytest"; + license = lib.licenses.free; + }; + }) {}; python-x = callPackage ({ fetchFromGitHub, fetchurl, folding, lib, melpaBuild, python ? null }: melpaBuild { pname = "python-x"; @@ -31024,12 +31157,12 @@ pyvenv = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "pyvenv"; - version = "1.11"; + version = "1.12"; src = fetchFromGitHub { owner = "jorgenschaefer"; repo = "pyvenv"; - rev = "f925bcb46ea64b699f7cd06933c48e0d5db88b73"; - sha256 = "1a346qdimr1dvj53q033aqnahwd2dhyn9jadrs019nm0bzgw7g63"; + rev = "71eec02c25006737444dec7dfd004285f6cff6a8"; + sha256 = "1j62qf4llrbmwwi7ynrhnzvh0g4razbc21vdlaa8jkjg6y5id95m"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/e37236b89b9705ba7a9d134b1fb2c3c003953a9b/recipes/pyvenv"; @@ -32059,12 +32192,12 @@ rg = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, s }: melpaBuild { pname = "rg"; - version = "1.4.1"; + version = "1.4.2"; src = fetchFromGitHub { owner = "dajva"; repo = "rg.el"; - rev = "68984092d0e0725057e7b67ba32016903170f189"; - sha256 = "0qd3qh640339n1dn1isk23xhnkj0pds08yzfak4ijxyzlgl63bdq"; + rev = "562ac6fd6291f828ee6116db62982c77ddd52956"; + sha256 = "0r5pqjmjwn5qpm8kns1730a6cq3bqxjp8ha63w0n1hnrd4gb24sw"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/9ce1f721867383a841957370946f283f996fa76f/recipes/rg"; @@ -32350,6 +32483,27 @@ license = lib.licenses.free; }; }) {}; + rubik = callPackage ({ calc, cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "rubik"; + version = "1.2"; + src = fetchFromGitHub { + owner = "Kurvivor19"; + repo = "rubik-mode"; + rev = "7ec955639865ca8e99a941843e19b12be5015a47"; + sha256 = "0fdjg6gpg45m5myq517vkprmvh50xw10dqa8vwr9hfz2z8dy18ja"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/00946ed21b0f05b753c792863f6bcc99c26c32a3/recipes/rubik"; + sha256 = "07bbh5vjw3jdxf06lxqm45y8ijcai391mf97xw5c29z33vhqs267"; + name = "rubik"; + }; + packageRequires = [ calc cl-lib emacs ]; + meta = { + homepage = "https://melpa.org/#/rubik"; + license = lib.licenses.free; + }; + }) {}; rubocop = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "rubocop"; @@ -34868,22 +35022,22 @@ license = lib.licenses.free; }; }) {}; - ssh-deploy = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: + ssh-deploy = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "ssh-deploy"; - version = "1.4"; + version = "1.5"; src = fetchFromGitHub { owner = "cjohansson"; repo = "emacs-ssh-deploy"; - rev = "ab4b80e206163b09a021f7de157e8bd4ae66358b"; - sha256 = "1c8hk7xwwlgkdw5xjcznpmajv904v2vs8mrcnmlay99r2qj3p2yx"; + rev = "aef539bb4feefe927fa48d01736dfadb7b3d7930"; + sha256 = "0vra7y2icid9sdyp7iygwkp4xaas249nm1lcbcyfpaad250g2pn4"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/ssh-deploy"; sha256 = "1ys3cc5fz8y4rsiq3daqgcpa14ssv1q4cw0pqbfscql6mps0mjdm"; name = "ssh-deploy"; }; - packageRequires = []; + packageRequires = [ emacs ]; meta = { homepage = "https://melpa.org/#/ssh-deploy"; license = lib.licenses.free; @@ -34973,6 +35127,27 @@ license = lib.licenses.free; }; }) {}; + stgit = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "stgit"; + version = "0.18"; + src = fetchFromGitHub { + owner = "ctmarinas"; + repo = "stgit"; + rev = "3df606d14f6673fede6cdf5fad921a664c03e108"; + sha256 = "0ydgg744m671nkhg7h4q2z3b9vpbc9914rbc0wcgimqfqsxkxx2y"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/726da64b7baea1735a916b826bdfb8f575860e21/recipes/stgit"; + sha256 = "1gbr0pvvig2vg94svy1r6zp57rhyg6n9yp7qvlkfal1z2lhzhs0g"; + name = "stgit"; + }; + packageRequires = []; + meta = { + homepage = "https://melpa.org/#/stgit"; + license = lib.licenses.free; + }; + }) {}; string-edit = callPackage ({ dash, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "string-edit"; @@ -35161,6 +35336,48 @@ license = lib.licenses.free; }; }) {}; + sudden-death = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "sudden-death"; + version = "0.2.1"; + src = fetchFromGitHub { + owner = "yewton"; + repo = "sudden-death.el"; + rev = "791a63d3f4df192e71f4232a9a4c5588f4b43dfb"; + sha256 = "0z3adwd6ymapkdniny3ax2i3wzxp11g6in4bghbcr9bfdxcsf7ps"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/3f20f389a2d7ddf49ca64d945b41584a7c120faf/recipes/sudden-death"; + sha256 = "1wrhb3d27j07i64hvjggyajm752w4mhrhq09lfvyhz6ykp1ly3fh"; + name = "sudden-death"; + }; + packageRequires = []; + meta = { + homepage = "https://melpa.org/#/sudden-death"; + license = lib.licenses.free; + }; + }) {}; + sudo-edit = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "sudo-edit"; + version = "0.1.0"; + src = fetchFromGitHub { + owner = "nflath"; + repo = "sudo-edit"; + rev = "bcb12aaa0da0c56d851cfa2f1b3ea4afdd2a755b"; + sha256 = "1k6sx8k304dw9dlidnxcln9ip9cj3b6i196z98g9n0kcd1js9f99"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/3b08d4bbdb23b988db5ed7cb5a2a925b7c2e242e/recipes/sudo-edit"; + sha256 = "10vz7q8m0l2dyhiy9r9nj17qlwyv032glshzljzhm1n20w8y1fq4"; + name = "sudo-edit"; + }; + packageRequires = [ cl-lib emacs ]; + meta = { + homepage = "https://melpa.org/#/sudo-edit"; + license = lib.licenses.free; + }; + }) {}; suggest = callPackage ({ dash, emacs, f, fetchFromGitHub, fetchurl, lib, loop, melpaBuild, s }: melpaBuild { pname = "suggest"; @@ -35266,27 +35483,6 @@ license = lib.licenses.free; }; }) {}; - swbuff = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: - melpaBuild { - pname = "swbuff"; - version = "3.3"; - src = fetchFromGitHub { - owner = "emacsorphanage"; - repo = "swbuff"; - rev = "8d5b2bec12503509554f9dd83b97c198b259db2b"; - sha256 = "0h96pwvf1smd2kakd5ydsn6q59dv9sj706p1ak86aj82m028wzk5"; - }; - recipeFile = fetchurl { - url = "https://raw.githubusercontent.com/milkypostman/melpa/39e87d0e01a4a836671b6d6e22091df6ebecf566/recipes/swbuff"; - sha256 = "1bqnq6zxkq4yyq3khnkbprgwq5k93rpcmmkjbr9wqf9drfld1bkk"; - name = "swbuff"; - }; - packageRequires = []; - meta = { - homepage = "https://melpa.org/#/swbuff"; - license = lib.licenses.free; - }; - }) {}; sweetgreen = callPackage ({ cl-lib ? null, dash, fetchFromGitHub, fetchurl, helm, lib, melpaBuild, request }: melpaBuild { pname = "sweetgreen"; @@ -35311,12 +35507,12 @@ swift-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, seq }: melpaBuild { pname = "swift-mode"; - version = "4.1.0"; + version = "4.1.1"; src = fetchFromGitHub { owner = "chrisbarrett"; repo = "swift-mode"; - rev = "7739e4954cc614ecd6b37e935f82ad057e256d56"; - sha256 = "09mvwfi3nv4hkdvh76d7737nl3zaxn4a5vpmv2645q9s4vcq8zj8"; + rev = "4e2227906c90631bfe5109df3e7f57bc1e70ac29"; + sha256 = "02xpb453jdaqwx8rsc3zg2fnxzfv8fs993kw1bk45s4dja1f95p4"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/19cb133191cd6f9623e99e958d360113595e756a/recipes/swift-mode"; @@ -36548,12 +36744,12 @@ treemacs = callPackage ({ ace-window, cl-lib ? null, dash, emacs, f, fetchFromGitHub, fetchurl, ht, hydra, lib, melpaBuild, pfuture, s }: melpaBuild { pname = "treemacs"; - version = "1.18"; + version = "1.18.1"; src = fetchFromGitHub { owner = "Alexander-Miller"; repo = "treemacs"; - rev = "2bab3bfb6e75d44d42e1055c4e9bb44400a46475"; - sha256 = "0zzm17cv1j25b2hj6vlqwi7iglqckijqbsvap0lkijimaipzpq52"; + rev = "e8be02971ad6c7a9c33ec544fa41b4b2f6827a35"; + sha256 = "0fk45jmnx34azldxa4yrv6lqmkaxkpkqbnwnn29q7y4ld0ljghs0"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/7a680ee3b4a0ab286ac04d84b3fba7606b40c65b/recipes/treemacs"; @@ -36569,12 +36765,12 @@ treemacs-evil = callPackage ({ evil, fetchFromGitHub, fetchurl, lib, melpaBuild, treemacs }: melpaBuild { pname = "treemacs-evil"; - version = "1.18"; + version = "1.18.1"; src = fetchFromGitHub { owner = "Alexander-Miller"; repo = "treemacs"; - rev = "2bab3bfb6e75d44d42e1055c4e9bb44400a46475"; - sha256 = "0zzm17cv1j25b2hj6vlqwi7iglqckijqbsvap0lkijimaipzpq52"; + rev = "e8be02971ad6c7a9c33ec544fa41b4b2f6827a35"; + sha256 = "0fk45jmnx34azldxa4yrv6lqmkaxkpkqbnwnn29q7y4ld0ljghs0"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/7a680ee3b4a0ab286ac04d84b3fba7606b40c65b/recipes/treemacs-evil"; @@ -36590,12 +36786,12 @@ treemacs-projectile = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, projectile, treemacs }: melpaBuild { pname = "treemacs-projectile"; - version = "1.18"; + version = "1.18.1"; src = fetchFromGitHub { owner = "Alexander-Miller"; repo = "treemacs"; - rev = "2bab3bfb6e75d44d42e1055c4e9bb44400a46475"; - sha256 = "0zzm17cv1j25b2hj6vlqwi7iglqckijqbsvap0lkijimaipzpq52"; + rev = "e8be02971ad6c7a9c33ec544fa41b4b2f6827a35"; + sha256 = "0fk45jmnx34azldxa4yrv6lqmkaxkpkqbnwnn29q7y4ld0ljghs0"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/7a680ee3b4a0ab286ac04d84b3fba7606b40c65b/recipes/treemacs-projectile"; @@ -36776,22 +36972,22 @@ license = lib.licenses.free; }; }) {}; - turing-machine = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: + turing-machine = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "turing-machine"; - version = "0.1.4"; + version = "0.2.0"; src = fetchFromGitHub { owner = "therockmandolinist"; repo = "turing-machine"; - rev = "41bfe79ecf8a44dcbaf308c33cbdf324f7c806ae"; - sha256 = "04j4nw526mxlm4fd2a28p0pa2ss4b4vznjvpk0f0wlf61ymvy884"; + rev = "ad1dccc9c445f9e4465e1c67cbbfea9583153047"; + sha256 = "0qaz4r5ahg2fxsfyxilb8c9956i5ra9vg80l82slm8vrnsinzll6"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/a003b40a52a92b3ab4d1ffc003f570d4fa6bfbde/recipes/turing-machine"; sha256 = "1ndy953q9hr1psqqkkqsffyvj800cnqdxcrixqiw0ls77f2kczcn"; name = "turing-machine"; }; - packageRequires = [ cl-lib emacs ]; + packageRequires = [ emacs ]; meta = { homepage = "https://melpa.org/#/turing-machine"; license = lib.licenses.free; @@ -39285,8 +39481,8 @@ version = "1.80"; src = fetchhg { url = "https://www.yatex.org/hgrepos/yatex"; - rev = "b1896ef49747"; - sha256 = "1a8qc1krskl5qdy4fikilrrzrwmrghs4h1yaj5lclzywpc67zi8b"; + rev = "af4601ee3c6a"; + sha256 = "1r0irbkg8c5aapd1i7il31wv2fmhi0bzspiy21k670m896jqx50p"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/9854c39fc1889891fe460d0d5ac9224de3f6c635/recipes/yatex"; diff --git a/pkgs/applications/editors/emacs-modes/org-generated.nix b/pkgs/applications/editors/emacs-modes/org-generated.nix index a8815b4d3d87..f6349089be1e 100644 --- a/pkgs/applications/editors/emacs-modes/org-generated.nix +++ b/pkgs/applications/editors/emacs-modes/org-generated.nix @@ -1,10 +1,10 @@ { callPackage }: { org = callPackage ({ elpaBuild, fetchurl, lib }: elpaBuild { pname = "org"; - version = "20180212"; + version = "20180226"; src = fetchurl { - url = "https://orgmode.org/elpa/org-20180212.tar"; - sha256 = "09wgmiavby009mkc5v2d0znrrs40fnmhzq252hni4zjy8kbgwfzk"; + url = "https://orgmode.org/elpa/org-20180226.tar"; + sha256 = "0jqvry6gah1bwnryha4asynj13jyds3qim0xcy7s01rxk99m2ziy"; }; packageRequires = []; meta = { @@ -14,10 +14,10 @@ }) {}; org-plus-contrib = callPackage ({ elpaBuild, fetchurl, lib }: elpaBuild { pname = "org-plus-contrib"; - version = "20180212"; + version = "20180226"; src = fetchurl { - url = "https://orgmode.org/elpa/org-plus-contrib-20180212.tar"; - sha256 = "0wy9j2iagjzzjkqfsz1askxg4jmaxc0p0f42jbzx2ja7h4qkm9nj"; + url = "https://orgmode.org/elpa/org-plus-contrib-20180226.tar"; + sha256 = "034wp70hcqnpidji5k1k80mj35iyyy098nbvc2sl7i2aca4m03zc"; }; packageRequires = []; meta = { diff --git a/pkgs/applications/editors/emacs/default.nix b/pkgs/applications/editors/emacs/default.nix index f87cc72f2f2b..ba243629cc3e 100644 --- a/pkgs/applications/editors/emacs/default.nix +++ b/pkgs/applications/editors/emacs/default.nix @@ -4,8 +4,8 @@ , alsaLib, cairo, acl, gpm, AppKit, CoreWLAN, Kerberos, GSS, ImageIO , withX ? !stdenv.isDarwin , withGTK2 ? false, gtk2 ? null -, withGTK3 ? true, gtk3 ? null, gsettings_desktop_schemas ? null -, withXwidgets ? false, webkitgtk24x-gtk3 ? null, wrapGAppsHook ? null, glib_networking ? null +, withGTK3 ? true, gtk3 ? null, gsettings-desktop-schemas ? null +, withXwidgets ? false, webkitgtk24x-gtk3 ? null, wrapGAppsHook ? null, glib-networking ? null , withCsrc ? true , srcRepo ? false, autoconf ? null, automake ? null, texinfo ? null }: @@ -61,9 +61,9 @@ stdenv.mkDerivation rec { [ xlibsWrapper libXaw Xaw3d libXpm libpng libjpeg libungif libtiff librsvg libXft imagemagick gconf ] ++ lib.optional (withX && withGTK2) gtk2 - ++ lib.optionals (withX && withGTK3) [ gtk3 gsettings_desktop_schemas ] + ++ lib.optionals (withX && withGTK3) [ gtk3 gsettings-desktop-schemas ] ++ lib.optional (stdenv.isDarwin && withX) cairo - ++ lib.optionals (withX && withXwidgets) [ webkitgtk24x-gtk3 glib_networking ]; + ++ lib.optionals (withX && withXwidgets) [ webkitgtk24x-gtk3 glib-networking ]; propagatedBuildInputs = lib.optionals stdenv.isDarwin [ AppKit GSS ImageIO ]; diff --git a/pkgs/applications/editors/geany/default.nix b/pkgs/applications/editors/geany/default.nix index 9288d293b916..23478758efe5 100644 --- a/pkgs/applications/editors/geany/default.nix +++ b/pkgs/applications/editors/geany/default.nix @@ -3,7 +3,7 @@ with stdenv.lib; let - version = "1.32"; + version = "1.33"; in stdenv.mkDerivation rec { @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "http://download.geany.org/${name}.tar.bz2"; - sha256 = "8b7be10b95d0614eb07f845ba2280f7c026eacd5739d8fac4d5d26606f8c3c2d"; + sha256 = "66baaff43f12caebcf0efec9a5533044dc52837f799c73a1fd7312caa86099c2"; }; NIX_LDFLAGS = if stdenv.isDarwin then "-lintl" else null; diff --git a/pkgs/applications/editors/jetbrains/default.nix b/pkgs/applications/editors/jetbrains/default.nix index 0e77094b819c..a02773f715c4 100644 --- a/pkgs/applications/editors/jetbrains/default.nix +++ b/pkgs/applications/editors/jetbrains/default.nix @@ -247,25 +247,25 @@ in datagrip = buildDataGrip rec { name = "datagrip-${version}"; - version = "2017.2.3"; /* updated by script */ + version = "2017.3.5"; /* updated by script */ description = "Your Swiss Army Knife for Databases and SQL"; license = stdenv.lib.licenses.unfree; src = fetchurl { url = "https://download.jetbrains.com/datagrip/${name}.tar.gz"; - sha256 = "0yp5h8ps5hfi07gsz14pp61skibfx48klg8qmc4f6q6xzcfdqxsf"; /* updated by script */ + sha256 = "1hfy0mxdsvydjjklh8fwdz6f6qxajhngmcmyyzw0gdfhw6ldrv9c"; /* updated by script */ }; wmClass = "jetbrains-datagrip"; - update-channel = "datagrip_2017_2"; + update-channel = "datagrip_2017_3"; }; goland = buildGoland rec { name = "goland-${version}"; - version = "2017.3.1"; /* updated by script */ + version = "2017.3.2"; /* updated by script */ description = "Up and Coming Go IDE"; license = stdenv.lib.licenses.unfree; src = fetchurl { url = "https://download.jetbrains.com/go/${name}.tar.gz"; - sha256 = "0cfjfv01ra67sr8n8ijqwd9zm2yzb1nm447kf0mr5cynr124ch0z"; /* updated by script */ + sha256 = "0bhvj1xqlpy58yq2s5nrhhaw53i913zpr135b1f6r5s22nvkigvm"; /* updated by script */ }; wmClass = "jetbrains-goland"; update-channel = "goland_release"; @@ -338,15 +338,15 @@ in rider = buildRider rec { name = "rider-${version}"; - version = "2017.2.1"; /* updated by script */ + version = "2017.3.1"; /* updated by script */ description = "A cross-platform .NET IDE based on the IntelliJ platform and ReSharper"; license = stdenv.lib.licenses.unfree; src = fetchurl { url = "https://download.jetbrains.com/resharper/JetBrains.Rider-${version}.tar.gz"; - sha256 = "1zviknxamp1y7lrlg5qfj3ijp96z0dqvcr42ca0fbx1xb887wzww"; /* updated by script */ + sha256 = "0k9yc00lmk826pylfs9jyxqnlczk9vhq7bs61b8nyfam1dqbgikv"; /* updated by script */ }; wmClass = "jetbrains-rider"; - update-channel = "rider_2017_2"; + update-channel = "rider_2017_3"; }; ruby-mine = buildRubyMine rec { diff --git a/pkgs/applications/editors/jucipp/default.nix b/pkgs/applications/editors/jucipp/default.nix index 3d623d3f3bda..c24866671f9b 100644 --- a/pkgs/applications/editors/jucipp/default.nix +++ b/pkgs/applications/editors/jucipp/default.nix @@ -1,4 +1,4 @@ -{ config, stdenv, fetchgit, makeWrapper, gnome3, at_spi2_core, libcxx, +{ config, stdenv, fetchgit, makeWrapper, gnome3, at-spi2-core, libcxx, boost, epoxy, cmake, aspell, llvmPackages, libgit2, pkgconfig, pcre, libXdmcp, libxkbcommon, libpthreadstubs, wrapGAppsHook, aspellDicts, coreutils, glibc, dbus_libs, openssl, libxml2, gnumake, ctags }: @@ -30,7 +30,7 @@ stdenv.mkDerivation rec { openssl libxml2 gnome3.gtksourceview - at_spi2_core + at-spi2-core pcre epoxy boost diff --git a/pkgs/applications/editors/kdevelop5/kdevelop.nix b/pkgs/applications/editors/kdevelop5/kdevelop.nix index 1a164ec08de9..41d1a6262ed5 100644 --- a/pkgs/applications/editors/kdevelop5/kdevelop.nix +++ b/pkgs/applications/editors/kdevelop5/kdevelop.nix @@ -3,7 +3,7 @@ , kconfig, kdeclarative, kdoctools, kiconthemes, ki18n, kitemmodels, kitemviews , kjobwidgets, kcmutils, kio, knewstuff, knotifyconfig, kparts, ktexteditor , threadweaver, kxmlgui, kwindowsystem, grantlee, kcrash, karchive, kguiaddons -, plasma-framework, krunner, kdevplatform, kdevelop-pg-qt, shared_mime_info +, plasma-framework, krunner, kdevplatform, kdevelop-pg-qt, shared-mime-info , libksysguard, konsole, llvmPackages, makeWrapper }: @@ -34,7 +34,7 @@ mkDerivation rec { kconfig kdeclarative kdoctools kiconthemes ki18n kitemmodels kitemviews kjobwidgets kcmutils kio knewstuff knotifyconfig kparts ktexteditor threadweaver kxmlgui kwindowsystem grantlee plasma-framework krunner - kdevplatform shared_mime_info libksysguard konsole kcrash karchive kguiaddons + kdevplatform shared-mime-info libksysguard konsole kcrash karchive kguiaddons ]; postInstall = '' diff --git a/pkgs/applications/editors/lighttable/default.nix b/pkgs/applications/editors/lighttable/default.nix index 74a83c1278af..c5f8278f649d 100644 --- a/pkgs/applications/editors/lighttable/default.nix +++ b/pkgs/applications/editors/lighttable/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, zlib, glib, alsaLib, makeDesktopItem -, dbus, gtk2, atk, pango, freetype, fontconfig, libgnome_keyring3, gdk_pixbuf +, dbus, gtk2, atk, pango, freetype, fontconfig, libgnome-keyring3, gdk_pixbuf , cairo, cups, expat, libgpgerror, nspr, gnome3, nss, xorg, systemd, libnotify }: let libPath = stdenv.lib.makeLibraryPath [ - stdenv.cc.cc zlib glib dbus gtk2 atk pango freetype libgnome_keyring3 nss + stdenv.cc.cc zlib glib dbus gtk2 atk pango freetype libgnome-keyring3 nss fontconfig gdk_pixbuf cairo cups expat libgpgerror alsaLib nspr gnome3.gconf xorg.libXrender xorg.libX11 xorg.libXext xorg.libXdamage xorg.libXtst xorg.libXcomposite xorg.libXi xorg.libXfixes libnotify xorg.libXrandr diff --git a/pkgs/applications/editors/mg/default.nix b/pkgs/applications/editors/mg/default.nix index f4bdee830e19..d0367d7c3051 100644 --- a/pkgs/applications/editors/mg/default.nix +++ b/pkgs/applications/editors/mg/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "mg-${version}"; - version = "20170828"; + version = "20171014"; src = fetchurl { url = "http://homepage.boetes.org/software/mg/${name}.tar.gz"; - sha256 = "139nc58l5ifj3d3478nhqls0lic52skmxfxggznzxaz9camqd20z"; + sha256 = "0hakfikzsml7z0hja8m8mcahrmfy2piy81bq9nccsjplyfc9clai"; }; enableParallelBuilding = true; diff --git a/pkgs/applications/editors/micro/default.nix b/pkgs/applications/editors/micro/default.nix index bea1e18e0612..f1c1e3dcac70 100644 --- a/pkgs/applications/editors/micro/default.nix +++ b/pkgs/applications/editors/micro/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { name = "micro-${version}"; - version = "1.3.4"; + version = "1.4.0"; goPackagePath = "github.com/zyedidia/micro"; @@ -10,7 +10,7 @@ buildGoPackage rec { owner = "zyedidia"; repo = "micro"; rev = "v${version}"; - sha256 = "1giyp2xk2rb6vdyfnj5wa7qb9fwbcmmwm16wdlnmq7xnp7qamdkw"; + sha256 = "0w1rmh81h28n1jlb05k89i751h498i6p883hrsjr70hvrwq5zjpb"; fetchSubmodules = true; }; diff --git a/pkgs/applications/editors/monodevelop/default.nix b/pkgs/applications/editors/monodevelop/default.nix index 53ea9741c03c..e8e529b63abc 100644 --- a/pkgs/applications/editors/monodevelop/default.nix +++ b/pkgs/applications/editors/monodevelop/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, fetchgit, fetchNuGet -, autoconf, automake, pkgconfig, shared_mime_info, intltool +, autoconf, automake, pkgconfig, shared-mime-info, intltool , glib, mono, gtk-sharp-2_0, gnome2, gnome-sharp, unzip , dotnetPackages }: @@ -36,7 +36,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig ]; buildInputs = [ - autoconf automake shared_mime_info intltool + autoconf automake shared-mime-info intltool mono gtk-sharp-2_0 gnome-sharp unzip dotnetPackages.NUnit dotnetPackages.NUnitRunners diff --git a/pkgs/applications/editors/neovim/wrapper.nix b/pkgs/applications/editors/neovim/wrapper.nix index 187474de5b6f..a27b5a41ac70 100644 --- a/pkgs/applications/editors/neovim/wrapper.nix +++ b/pkgs/applications/editors/neovim/wrapper.nix @@ -25,7 +25,7 @@ let name = "neovim-ruby-env"; gemdir = ./ruby_provider; postBuild = '' - ln -s ${ruby}/bin/* $out/bin + ln -sf ${ruby}/bin/* $out/bin ''; }; diff --git a/pkgs/applications/editors/vis/default.nix b/pkgs/applications/editors/vis/default.nix index eef1746ff380..0db93f78781d 100644 --- a/pkgs/applications/editors/vis/default.nix +++ b/pkgs/applications/editors/vis/default.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { name = "vis-${version}"; - version = "0.3"; + version = "0.4"; src = fetchFromGitHub { rev = "v${version}"; - sha256 = "13xyyq30dg66v4azl2jvlyfyglxmc3r9p7p87vrganq0p6lmb0bk"; + sha256 = "1crsg3ssqv4xix9z16hwl0zyx7hxk686s52zmrp7yfak3m5igf9k"; repo = "vis"; owner = "martanne"; }; diff --git a/pkgs/applications/gis/qgis/default.nix b/pkgs/applications/gis/qgis/default.nix index d689254f2c85..c2a09a507cc5 100644 --- a/pkgs/applications/gis/qgis/default.nix +++ b/pkgs/applications/gis/qgis/default.nix @@ -5,7 +5,7 @@ }: stdenv.mkDerivation rec { - name = "qgis-2.18.15"; + name = "qgis-2.18.16"; buildInputs = [ gdal qt4 flex openssl bison proj geos xlibsWrapper sqlite gsl qwt qscintilla fcgi libspatialindex libspatialite postgresql qjson qca2 txt2tags ] ++ @@ -26,7 +26,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "http://qgis.org/downloads/${name}.tar.bz2"; - sha256 = "1jpprkk91s2wwx0iiqlnsngxnn52zs32bad799fjai58nrsh8b7b"; + sha256 = "0d880m013kzi4qiyr27yjx6hzpb652slp66gyqgw9ziw03wy12c9"; }; cmakeFlags = stdenv.lib.optional withGrass "-DGRASS_PREFIX7=${grass}/${grass.name}"; diff --git a/pkgs/applications/graphics/darktable/default.nix b/pkgs/applications/graphics/darktable/default.nix index e9932b93fbe0..14659d796fc3 100644 --- a/pkgs/applications/graphics/darktable/default.nix +++ b/pkgs/applications/graphics/darktable/default.nix @@ -1,5 +1,5 @@ -{ stdenv, fetchurl, libsoup, graphicsmagick, json_glib, wrapGAppsHook -, cairo, cmake, ninja, curl, perl, llvm, desktop_file_utils, exiv2, glib +{ stdenv, fetchurl, libsoup, graphicsmagick, json-glib, wrapGAppsHook +, cairo, cmake, ninja, curl, perl, llvm, desktop-file-utils, exiv2, glib , ilmbase, gtk3, intltool, lcms2, lensfun, libX11, libexif, libgphoto2, libjpeg , libpng, librsvg, libtiff, openexr, osm-gps-map, pkgconfig, sqlite, libxslt , openjpeg, lua, pugixml, colord, colord-gtk, libwebp, libsecret, gnome3 @@ -14,12 +14,12 @@ stdenv.mkDerivation rec { sha256 = "014pq80i5k1kdvvrl7xrgaaq3i4fzv09h7a3pwzlp2ahkczwcm32"; }; - nativeBuildInputs = [ cmake ninja llvm pkgconfig intltool perl desktop_file_utils wrapGAppsHook ]; + nativeBuildInputs = [ cmake ninja llvm pkgconfig intltool perl desktop-file-utils wrapGAppsHook ]; buildInputs = [ cairo curl exiv2 glib gtk3 ilmbase lcms2 lensfun libX11 libexif libgphoto2 libjpeg libpng librsvg libtiff openexr sqlite libxslt - libsoup graphicsmagick json_glib openjpeg lua pugixml + libsoup graphicsmagick json-glib openjpeg lua pugixml colord colord-gtk libwebp libsecret gnome3.adwaita-icon-theme osm-gps-map ]; diff --git a/pkgs/applications/graphics/feh/default.nix b/pkgs/applications/graphics/feh/default.nix index 478e9d2b4530..6d603f6940bb 100644 --- a/pkgs/applications/graphics/feh/default.nix +++ b/pkgs/applications/graphics/feh/default.nix @@ -6,11 +6,11 @@ with stdenv.lib; stdenv.mkDerivation rec { name = "feh-${version}"; - version = "2.23"; + version = "2.24"; src = fetchurl { url = "https://feh.finalrewind.org/${name}.tar.bz2"; - sha256 = "18922zv8ckm82r1ap1yn7plbk6djpj02za2ahng58sjj2fw3rpqn"; + sha256 = "148qbxkk5m7i3cxymnfwi7aikqjyfxr306dlqm9ndp6x932js5wq"; }; outputs = [ "out" "man" "doc" ]; diff --git a/pkgs/applications/graphics/gcolor3/default.nix b/pkgs/applications/graphics/gcolor3/default.nix index afad1e6c3af0..09d1a86db8e3 100644 --- a/pkgs/applications/graphics/gcolor3/default.nix +++ b/pkgs/applications/graphics/gcolor3/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, gnome3, libtool, intltool, pkgconfig, gtk3, hicolor_icon_theme, wrapGAppsHook } : +{ stdenv, fetchFromGitHub, gnome3, libtool, intltool, pkgconfig, gtk3, hicolor-icon-theme, wrapGAppsHook } : let version = "2.2"; @@ -12,7 +12,7 @@ in stdenv.mkDerivation { sha256 = "1rbahsi33pfggpj5cigy6wy5333g3rpm8v2q0b35c6m7pwhmf2gr"; }; - nativeBuildInputs = [ gnome3.gnome_common libtool intltool pkgconfig hicolor_icon_theme wrapGAppsHook ]; + nativeBuildInputs = [ gnome3.gnome-common libtool intltool pkgconfig hicolor-icon-theme wrapGAppsHook ]; buildInputs = [ gtk3 ]; diff --git a/pkgs/applications/graphics/geeqie/default.nix b/pkgs/applications/graphics/geeqie/default.nix index 1e8f0e209c06..d034f5d64d93 100644 --- a/pkgs/applications/graphics/geeqie/default.nix +++ b/pkgs/applications/graphics/geeqie/default.nix @@ -1,23 +1,24 @@ -{ stdenv, fetchurl, pkgconfig, autoconf, automake, gtk2, libpng, exiv2 -, lcms, intltool, gettext, fbida +{ stdenv, fetchurl, pkgconfig, autoconf, automake, gettext, intltool +, gtk3, lcms2, exiv2, libchamplain, clutter-gtk, ffmpegthumbnailer, fbida }: stdenv.mkDerivation rec { name = "geeqie-${version}"; - version = "1.3"; + version = "1.4"; src = fetchurl { url = "http://geeqie.org/${name}.tar.xz"; - sha256 = "0gzc82sy66pbsmq7lnmq4y37zqad1zfwfls3ik3dmfm8s5nmcvsb"; + sha256 = "0ciygvcxb78pqg59r6p061mkbpvkgv2rv3r79j3kgv3kalb3ln2w"; }; + # Do not build the changelog as this requires markdown. + patches = [ ./geeqie-no-changelog.patch ]; + preConfigure = "./autogen.sh"; - configureFlags = [ "--enable-gps" ]; - - nativeBuildInputs = [ pkgconfig ]; + nativeBuildInputs = [ pkgconfig autoconf automake gettext intltool ]; buildInputs = [ - autoconf automake gtk2 libpng exiv2 lcms intltool gettext + gtk3 lcms2 exiv2 libchamplain clutter-gtk ffmpegthumbnailer fbida ]; postInstall = '' @@ -27,6 +28,8 @@ stdenv.mkDerivation rec { -e '1 a export PATH=${stdenv.lib.makeBinPath [ exiv2 fbida ]}:$PATH' ''; + enableParallelBuilding = true; + meta = with stdenv.lib; { description = "Lightweight GTK+ based image viewer"; @@ -45,7 +48,7 @@ stdenv.mkDerivation rec { homepage = http://geeqie.sourceforge.net; - maintainers = with maintainers; [ pSub ]; + maintainers = with maintainers; [ jfrankenau pSub ]; platforms = platforms.gnu; }; } diff --git a/pkgs/applications/graphics/geeqie/geeqie-no-changelog.patch b/pkgs/applications/graphics/geeqie/geeqie-no-changelog.patch new file mode 100644 index 000000000000..1b8833b135f3 --- /dev/null +++ b/pkgs/applications/graphics/geeqie/geeqie-no-changelog.patch @@ -0,0 +1,14 @@ +--- geeqie-1.4.orig/Makefile.am 2017-12-31 07:31:21.000000000 -0500 ++++ geeqie-1.4/Makefile.am 2018-01-01 15:05:58.742068166 -0500 +@@ -10,9 +10,9 @@ + readmedir = @readmedir@ + + if HAVE_MARKDOWN +-readme_DATA = README.md COPYING ChangeLog TODO README.lirc AUTHORS README.html ChangeLog.html ++readme_DATA = README.md COPYING TODO README.lirc AUTHORS README.html + else +-readme_DATA = README.md COPYING ChangeLog TODO README.lirc AUTHORS ChangeLog.html ++readme_DATA = README.md COPYING TODO README.lirc AUTHORS + endif + + desktopdir = $(datadir)/applications diff --git a/pkgs/applications/graphics/giv/default.nix b/pkgs/applications/graphics/giv/default.nix index d01286e15a64..dea3fd4e3c61 100644 --- a/pkgs/applications/graphics/giv/default.nix +++ b/pkgs/applications/graphics/giv/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub, gdk_pixbuf, scons, pkgconfig, gtk2, glib, - pcre, cfitsio, perl, gob2, vala, libtiff, json_glib }: + pcre, cfitsio, perl, gob2, vala, libtiff, json-glib }: stdenv.mkDerivation rec { name = "giv-${version}"; @@ -26,7 +26,7 @@ stdenv.mkDerivation rec { installPhase = "scons install"; nativeBuildInputs = [ scons pkgconfig vala perl gob2 ]; - buildInputs = [ gdk_pixbuf gtk2 glib pcre cfitsio libtiff json_glib ]; + buildInputs = [ gdk_pixbuf gtk2 glib pcre cfitsio libtiff json-glib ]; meta = with stdenv.lib; { description = "Cross platform image and hierarchical vector viewer based"; diff --git a/pkgs/applications/graphics/glabels/default.nix b/pkgs/applications/graphics/glabels/default.nix index 6dcf8223777a..c1f15904818f 100644 --- a/pkgs/applications/graphics/glabels/default.nix +++ b/pkgs/applications/graphics/glabels/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, barcode, gnome3, autoreconfHook -, gtk3, gtk_doc, libxml2, librsvg , libtool, libe-book +, gtk3, gtk-doc, libxml2, librsvg , libtool, libe-book , intltool, itstool, makeWrapper, pkgconfig, which }: @@ -14,8 +14,8 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ autoreconfHook pkgconfig makeWrapper intltool ]; buildInputs = [ - barcode gtk3 gtk_doc gnome3.yelp_tools - gnome3.gnome_common gnome3.gsettings_desktop_schemas + barcode gtk3 gtk-doc gnome3.yelp-tools + gnome3.gnome-common gnome3.gsettings-desktop-schemas itstool libxml2 librsvg libe-book libtool ]; diff --git a/pkgs/applications/graphics/gthumb/default.nix b/pkgs/applications/graphics/gthumb/default.nix index 161e89151249..03489db933c1 100644 --- a/pkgs/applications/graphics/gthumb/default.nix +++ b/pkgs/applications/graphics/gthumb/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, gnome3, itstool, libxml2, pkgconfig, intltool, exiv2, libjpeg, libtiff, gstreamer, libraw, libsoup, libsecret, - libchamplain, librsvg, libwebp, json_glib, webkit, lcms2, bison, - flex, hicolor_icon_theme, wrapGAppsHook }: + libchamplain, librsvg, libwebp, json-glib, webkit, lcms2, bison, + flex, hicolor-icon-theme, wrapGAppsHook, shared-mime-info }: stdenv.mkDerivation rec { name = "${pname}-${version}"; @@ -17,12 +17,16 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig wrapGAppsHook ]; buildInputs = with gnome3; - [ itstool libxml2 intltool glib gtk gsettings_desktop_schemas dconf + [ itstool libxml2 intltool glib gtk gsettings-desktop-schemas dconf exiv2 libjpeg libtiff gstreamer libraw libsoup libsecret libchamplain - librsvg libwebp json_glib webkit lcms2 bison flex hicolor_icon_theme defaultIconTheme ]; + librsvg libwebp json-glib webkit lcms2 bison flex hicolor-icon-theme defaultIconTheme ]; enableParallelBuilding = true; + preFixup = '' + gappsWrapperArgs+=(--prefix XDG_DATA_DIRS : "${shared-mime-info}/share") + ''; + meta = with stdenv.lib; { homepage = https://wiki.gnome.org/Apps/gthumb; description = "Image browser and viewer for GNOME"; diff --git a/pkgs/applications/graphics/hugin/default.nix b/pkgs/applications/graphics/hugin/default.nix index 9acd8357cb71..50440ad8e42b 100644 --- a/pkgs/applications/graphics/hugin/default.nix +++ b/pkgs/applications/graphics/hugin/default.nix @@ -5,11 +5,11 @@ }: stdenv.mkDerivation rec { - name = "hugin-2017.0.0"; + name = "hugin-2018.0.0"; src = fetchurl { url = "mirror://sourceforge/hugin/${name}.tar.bz2"; - sha256 = "02a6rlwp20jdn5jdsyg3c7liljr10c3jfdkxiv9mkf9jgyi6wr46"; + sha256 = "1jv5wpqbq49fhbl5g521g1qxhdm1rm7acxd18fr3n3n5d830vbyk"; }; buildInputs = [ diff --git a/pkgs/applications/graphics/krita/default.nix b/pkgs/applications/graphics/krita/default.nix index 791cd7be2d09..1f7e779e88ab 100644 --- a/pkgs/applications/graphics/krita/default.nix +++ b/pkgs/applications/graphics/krita/default.nix @@ -29,7 +29,7 @@ mkDerivation rec { NIX_CFLAGS_COMPILE = [ "-I${ilmbase.dev}/include/OpenEXR" ]; meta = with lib; { - description = "A free an open source painting application"; + description = "A free and open source painting application"; homepage = https://krita.org/; maintainers = with maintainers; [ abbradar ]; platforms = platforms.linux; diff --git a/pkgs/applications/graphics/leocad/default.nix b/pkgs/applications/graphics/leocad/default.nix index 4b5c4517deab..4dc1e89116ed 100644 --- a/pkgs/applications/graphics/leocad/default.nix +++ b/pkgs/applications/graphics/leocad/default.nix @@ -7,13 +7,13 @@ set the variable LEOCAD_LIB=/path/to/libs/ or use option -l /path/to/libs/ stdenv.mkDerivation rec { name = "leocad-${version}"; - version = "17.07"; + version = "18.02"; src = fetchFromGitHub { owner = "leozide"; repo = "leocad"; rev = "v${version}"; - sha256 = "1j361pvxywi4nb2alhnnd4qpqrpg6503gbi17cadcdi434gbqbsd"; + sha256 = "0rb4kjyrr9ry85cfpbk52l19vvwn7lrh2kmj2lwq531smnygn5m3"; }; nativeBuildInputs = [ qmake4Hook ]; diff --git a/pkgs/applications/graphics/nomacs/default.nix b/pkgs/applications/graphics/nomacs/default.nix index ac0060ec7f8e..8c3a8bc894b3 100644 --- a/pkgs/applications/graphics/nomacs/default.nix +++ b/pkgs/applications/graphics/nomacs/default.nix @@ -4,7 +4,7 @@ , makeWrapper , pkgconfig , wrapGAppsHook -, gsettings_desktop_schemas +, gsettings-desktop-schemas , qtbase , qttools @@ -48,7 +48,7 @@ stdenv.mkDerivation rec { libraw libtiff quazip - gsettings_desktop_schemas]; + gsettings-desktop-schemas]; cmakeFlags = ["-DENABLE_OPENCV=ON" "-DENABLE_RAW=ON" diff --git a/pkgs/applications/graphics/rawtherapee/default.nix b/pkgs/applications/graphics/rawtherapee/default.nix index 5743f0c1bcb6..9964bec67814 100644 --- a/pkgs/applications/graphics/rawtherapee/default.nix +++ b/pkgs/applications/graphics/rawtherapee/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub, pkgconfig, cmake, pixman, libpthreadstubs, gtkmm3, libXau -, libXdmcp, lcms2, libiptcdata, libcanberra_gtk3, fftw, expat, pcre, libsigcxx, wrapGAppsHook +, libXdmcp, lcms2, libiptcdata, libcanberra-gtk3, fftw, expat, pcre, libsigcxx, wrapGAppsHook , lensfun }: @@ -18,7 +18,7 @@ stdenv.mkDerivation rec { buildInputs = [ pixman libpthreadstubs gtkmm3 libXau libXdmcp - lcms2 libiptcdata libcanberra_gtk3 fftw expat pcre libsigcxx lensfun + lcms2 libiptcdata libcanberra-gtk3 fftw expat pcre libsigcxx lensfun ]; cmakeFlags = [ diff --git a/pkgs/applications/graphics/shotwell/default.nix b/pkgs/applications/graphics/shotwell/default.nix index b23ddbf9d78b..437044ba2675 100644 --- a/pkgs/applications/graphics/shotwell/default.nix +++ b/pkgs/applications/graphics/shotwell/default.nix @@ -1,6 +1,6 @@ { fetchurl, stdenv, meson, ninja, gtk3, libexif, libgphoto2, libsoup, libxml2, vala, sqlite -, webkitgtk, pkgconfig, gnome3, gst_all_1, libgudev, libraw, glib, json_glib -, gettext, desktop_file_utils, gdk_pixbuf, librsvg, wrapGAppsHook +, webkitgtk, pkgconfig, gnome3, gst_all_1, libgudev, libraw, glib, json-glib +, gettext, desktop-file-utils, gdk_pixbuf, librsvg, wrapGAppsHook , itstool, libgdata }: # for dependencies see https://wiki.gnome.org/Apps/Shotwell/BuildingAndInstalling @@ -17,14 +17,14 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ - meson ninja pkgconfig itstool gettext desktop_file_utils wrapGAppsHook + meson ninja pkgconfig itstool gettext desktop-file-utils wrapGAppsHook ]; buildInputs = [ gtk3 libexif libgphoto2 libsoup libxml2 vala sqlite webkitgtk gst_all_1.gstreamer gst_all_1.gst-plugins-base gnome3.libgee - libgudev gnome3.gexiv2 gnome3.gsettings_desktop_schemas - libraw json_glib glib gdk_pixbuf librsvg gnome3.rest + libgudev gnome3.gexiv2 gnome3.gsettings-desktop-schemas + libraw json-glib glib gdk_pixbuf librsvg gnome3.rest gnome3.gcr gnome3.defaultIconTheme libgdata ]; diff --git a/pkgs/applications/graphics/viewnior/default.nix b/pkgs/applications/graphics/viewnior/default.nix index e951f3a7a937..c655cadef400 100644 --- a/pkgs/applications/graphics/viewnior/default.nix +++ b/pkgs/applications/graphics/viewnior/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub, autoreconfHook, pkgconfig, gtk2, libpng, exiv2, lcms -, intltool, gettext, shared_mime_info, glib, gdk_pixbuf, perl}: +, intltool, gettext, shared-mime-info, glib, gdk_pixbuf, perl}: stdenv.mkDerivation rec { name = "viewnior-${version}"; @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ autoreconfHook ]; buildInputs = [ pkgconfig gtk2 libpng exiv2 lcms intltool gettext - shared_mime_info glib gdk_pixbuf perl + shared-mime-info glib gdk_pixbuf perl ]; preFixup = '' diff --git a/pkgs/applications/graphics/vimiv/default.nix b/pkgs/applications/graphics/vimiv/default.nix index 38f63bdb3836..538931c1040e 100644 --- a/pkgs/applications/graphics/vimiv/default.nix +++ b/pkgs/applications/graphics/vimiv/default.nix @@ -1,5 +1,5 @@ { lib, python3Packages, fetchFromGitHub, imagemagick, librsvg, gtk3, jhead -, hicolor_icon_theme, defaultIconTheme +, hicolor-icon-theme, defaultIconTheme # Test requirements , dbus, xvfb_run, xdotool @@ -38,7 +38,7 @@ python3Packages.buildPythonApplication rec { ''; checkInputs = [ python3Packages.nose dbus.daemon xvfb_run xdotool ]; - buildInputs = [ hicolor_icon_theme defaultIconTheme librsvg ]; + buildInputs = [ hicolor-icon-theme defaultIconTheme librsvg ]; propagatedBuildInputs = with python3Packages; [ pillow pygobject3 gtk3 ]; makeWrapperArgs = [ diff --git a/pkgs/applications/kde/akonadi-mime.nix b/pkgs/applications/kde/akonadi-mime.nix index 52a17f5cbeb9..0ed958b4e770 100644 --- a/pkgs/applications/kde/akonadi-mime.nix +++ b/pkgs/applications/kde/akonadi-mime.nix @@ -1,6 +1,6 @@ { mkDerivation, lib, kdepimTeam, - extra-cmake-modules, shared_mime_info, + extra-cmake-modules, shared-mime-info, akonadi, kdbusaddons, ki18n, kio, kitemmodels, kmime }: @@ -10,7 +10,7 @@ mkDerivation { license = with lib.licenses; [ gpl2 lgpl21 ]; maintainers = kdepimTeam; }; - nativeBuildInputs = [ extra-cmake-modules shared_mime_info ]; + nativeBuildInputs = [ extra-cmake-modules shared-mime-info ]; buildInputs = [ akonadi kdbusaddons ki18n kio kitemmodels kmime ]; outputs = [ "out" "dev" ]; } diff --git a/pkgs/applications/kde/akonadi/default.nix b/pkgs/applications/kde/akonadi/default.nix index da7cd2e8d79d..cba0b1e59e3a 100644 --- a/pkgs/applications/kde/akonadi/default.nix +++ b/pkgs/applications/kde/akonadi/default.nix @@ -1,6 +1,6 @@ { mkDerivation, copyPathsToStore, lib, kdepimTeam, - extra-cmake-modules, shared_mime_info, + extra-cmake-modules, shared-mime-info, boost, kcompletion, kconfigwidgets, kcrash, kdbusaddons, kdesignerplugin, ki18n, kiconthemes, kio, kitemmodels, kwindowsystem, mysql, qttools, }: @@ -12,7 +12,7 @@ mkDerivation { maintainers = kdepimTeam; }; patches = copyPathsToStore (lib.readPathsFromFile ./. ./series); - nativeBuildInputs = [ extra-cmake-modules shared_mime_info ]; + nativeBuildInputs = [ extra-cmake-modules shared-mime-info ]; buildInputs = [ kcompletion kconfigwidgets kcrash kdbusaddons kdesignerplugin ki18n kiconthemes kio kwindowsystem qttools diff --git a/pkgs/applications/kde/k3b.nix b/pkgs/applications/kde/k3b.nix index b032de848794..89bc171d2953 100644 --- a/pkgs/applications/kde/k3b.nix +++ b/pkgs/applications/kde/k3b.nix @@ -1,5 +1,5 @@ { mkDerivation, lib -, extra-cmake-modules, kdoctools, makeWrapper, shared_mime_info +, extra-cmake-modules, kdoctools, makeWrapper, shared-mime-info , qtwebkit , libkcddb, karchive, kcmutils, kfilemetadata, knewstuff, knotifyconfig, solid, kxmlgui , flac, lame, libmad, libmpcdec, libvorbis @@ -28,7 +28,7 @@ mkDerivation { # cd/dvd cdparanoia libdvdcss libdvdread # others - ffmpeg libmusicbrainz3 shared_mime_info + ffmpeg libmusicbrainz3 shared-mime-info ]; propagatedUserEnvPkgs = [ (lib.getBin kinit) ]; postFixup = diff --git a/pkgs/applications/kde/kdenlive.nix b/pkgs/applications/kde/kdenlive.nix index 17d7da7b702c..b5eca47d6c0e 100644 --- a/pkgs/applications/kde/kdenlive.nix +++ b/pkgs/applications/kde/kdenlive.nix @@ -21,7 +21,7 @@ , kplotting , ktextwidgets , mlt -, shared_mime_info +, shared-mime-info , libv4l , kfilemetadata , ffmpeg @@ -62,7 +62,7 @@ mkDerivation { qtquickcontrols qtscript qtwebkit - shared_mime_info + shared-mime-info libv4l ffmpeg ]; diff --git a/pkgs/applications/kde/kdepim-runtime.nix b/pkgs/applications/kde/kdepim-runtime.nix index 3230efd82017..b3cfed91dd45 100644 --- a/pkgs/applications/kde/kdepim-runtime.nix +++ b/pkgs/applications/kde/kdepim-runtime.nix @@ -1,7 +1,7 @@ { mkDerivation, lib, kdepimTeam, extra-cmake-modules, kdoctools, - shared_mime_info, + shared-mime-info, akonadi, akonadi-calendar, akonadi-contacts, akonadi-mime, akonadi-notes, kalarmcal, kcalutils, kcontacts, kdav, kdelibs4support, kidentitymanagement, kimap, kmailtransport, kmbox, kmime, knotifications, knotifyconfig, @@ -14,7 +14,7 @@ mkDerivation { license = with lib.licenses; [ gpl2 lgpl21 fdl12 ]; maintainers = kdepimTeam; }; - nativeBuildInputs = [ extra-cmake-modules kdoctools shared_mime_info ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools shared-mime-info ]; buildInputs = [ akonadi akonadi-calendar akonadi-contacts akonadi-mime akonadi-notes kalarmcal kcalutils kcontacts kdav kdelibs4support kidentitymanagement kimap diff --git a/pkgs/applications/kde/kio-extras.nix b/pkgs/applications/kde/kio-extras.nix index 8abb58b46b27..13585848317b 100644 --- a/pkgs/applications/kde/kio-extras.nix +++ b/pkgs/applications/kde/kio-extras.nix @@ -1,5 +1,5 @@ { - mkDerivation, lib, extra-cmake-modules, kdoctools, shared_mime_info, + mkDerivation, lib, extra-cmake-modules, kdoctools, shared-mime-info, exiv2, kactivities, karchive, kbookmarks, kconfig, kconfigwidgets, kcoreaddons, kdbusaddons, kguiaddons, kdnssd, kiconthemes, ki18n, kio, khtml, kdelibs4support, kpty, libmtp, libssh, openexr, ilmbase, openslp, phonon, @@ -12,7 +12,7 @@ mkDerivation { license = with lib.licenses; [ gpl2 lgpl21 ]; maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ extra-cmake-modules kdoctools shared_mime_info ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools shared-mime-info ]; buildInputs = [ exiv2 kactivities karchive kbookmarks kconfig kconfigwidgets kcoreaddons kdbusaddons kguiaddons kdnssd kiconthemes ki18n kio khtml kdelibs4support diff --git a/pkgs/applications/kde/kmail-account-wizard.nix b/pkgs/applications/kde/kmail-account-wizard.nix index 9f3d5e2ea019..f380315cce90 100644 --- a/pkgs/applications/kde/kmail-account-wizard.nix +++ b/pkgs/applications/kde/kmail-account-wizard.nix @@ -1,6 +1,6 @@ { mkDerivation, lib, kdepimTeam, - extra-cmake-modules, kdoctools, shared_mime_info, + extra-cmake-modules, kdoctools, shared-mime-info, akonadi, kcmutils, kcrash, kdbusaddons, kidentitymanagement, kldap, kmailtransport, knewstuff, knotifications, knotifyconfig, kparts, kross, ktexteditor, kwallet, libkdepim, libkleo, pimcommon, qttools, @@ -12,7 +12,7 @@ mkDerivation { license = with lib.licenses; [ gpl2 lgpl21 fdl12 ]; maintainers = kdepimTeam; }; - nativeBuildInputs = [ extra-cmake-modules kdoctools shared_mime_info ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools shared-mime-info ]; buildInputs = [ akonadi kcmutils kcrash kdbusaddons kidentitymanagement kldap kmailtransport knewstuff knotifications knotifyconfig kparts kross ktexteditor kwallet libkdepim diff --git a/pkgs/applications/kde/marble.nix b/pkgs/applications/kde/marble.nix index 1217c29032b4..e0e80b05ebce 100644 --- a/pkgs/applications/kde/marble.nix +++ b/pkgs/applications/kde/marble.nix @@ -1,7 +1,7 @@ { mkDerivation, lib , extra-cmake-modules, kdoctools , qtscript, qtsvg, qtquickcontrols, qtwebkit -, krunner, shared_mime_info, kparts, knewstuff +, krunner, shared-mime-info, kparts, knewstuff , gpsd, perl }: @@ -10,7 +10,7 @@ mkDerivation { meta.license = with lib.licenses; [ lgpl21 gpl3 ]; nativeBuildInputs = [ extra-cmake-modules kdoctools perl ]; propagatedBuildInputs = [ - qtscript qtsvg qtquickcontrols qtwebkit shared_mime_info krunner kparts + qtscript qtsvg qtquickcontrols qtwebkit shared-mime-info krunner kparts knewstuff gpsd ]; } diff --git a/pkgs/applications/kde/okteta.nix b/pkgs/applications/kde/okteta.nix index 422968be35a5..0ac8ddebc75d 100644 --- a/pkgs/applications/kde/okteta.nix +++ b/pkgs/applications/kde/okteta.nix @@ -3,7 +3,7 @@ extra-cmake-modules, kdoctools, qtscript, kconfig, kinit, karchive, kcrash, kcmutils, kconfigwidgets, knewstuff, kparts, qca-qt5, - shared_mime_info + shared-mime-info }: mkDerivation { @@ -13,7 +13,7 @@ mkDerivation { maintainers = with lib.maintainers; [ peterhoeg ]; }; nativeBuildInputs = [ qtscript extra-cmake-modules kdoctools ]; - buildInputs = [ shared_mime_info ]; + buildInputs = [ shared-mime-info ]; propagatedBuildInputs = [ kconfig kinit kcmutils kconfigwidgets knewstuff kparts qca-qt5 karchive kcrash diff --git a/pkgs/applications/misc/artha/default.nix b/pkgs/applications/misc/artha/default.nix index cfd4d6b32de3..f69152820e43 100644 --- a/pkgs/applications/misc/artha/default.nix +++ b/pkgs/applications/misc/artha/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, dbus_glib, gtk2, pkgconfig, wordnet }: +{ stdenv, fetchurl, dbus-glib, gtk2, pkgconfig, wordnet }: stdenv.mkDerivation rec { name = "artha-${version}"; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ dbus_glib gtk2 wordnet ]; + buildInputs = [ dbus-glib gtk2 wordnet ]; meta = with stdenv.lib; { description = "An offline thesaurus based on WordNet"; diff --git a/pkgs/applications/misc/clipit/default.nix b/pkgs/applications/misc/clipit/default.nix index d9ea487a83bb..4477cbbcc06a 100644 --- a/pkgs/applications/misc/clipit/default.nix +++ b/pkgs/applications/misc/clipit/default.nix @@ -1,4 +1,4 @@ -{ fetchurl, stdenv, intltool, pkgconfig, gtk2, xdotool, hicolor_icon_theme }: +{ fetchurl, stdenv, intltool, pkgconfig, gtk2, xdotool, hicolor-icon-theme }: stdenv.mkDerivation rec { name = "clipit-${version}"; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ intltool gtk2 xdotool hicolor_icon_theme ]; + buildInputs = [ intltool gtk2 xdotool hicolor-icon-theme ]; meta = with stdenv.lib; { description = "Lightweight GTK+ Clipboard Manager"; diff --git a/pkgs/applications/misc/cura/default.nix b/pkgs/applications/misc/cura/default.nix index b9a160564a5d..edb10a0f6671 100644 --- a/pkgs/applications/misc/cura/default.nix +++ b/pkgs/applications/misc/cura/default.nix @@ -2,13 +2,13 @@ mkDerivation rec { name = "cura-${version}"; - version = "3.1.0"; + version = "3.2.1"; src = fetchFromGitHub { owner = "Ultimaker"; repo = "Cura"; rev = version; - sha256 = "1x732bzxdxnz1av8jlv5kzs08jpmsg6bz9i88jr63kw32d901xsm"; + sha256 = "0yaya0ww92qjm7g31q85m5f95nwdapldjx1kdf1ar4yzwh4r15rp"; }; buildInputs = [ qtbase qtquickcontrols ]; @@ -28,7 +28,7 @@ mkDerivation rec { meta = with lib; { description = "3D printer / slicing GUI built on top of the Uranium framework"; - homepage = "https://github.com/Ultimaker/Cura"; + homepage = https://github.com/Ultimaker/Cura; license = licenses.agpl3; platforms = platforms.linux; maintainers = with maintainers; [ abbradar ]; diff --git a/pkgs/applications/misc/curaengine/default.nix b/pkgs/applications/misc/curaengine/default.nix index 575889ad2c6f..c3a19e6551a2 100644 --- a/pkgs/applications/misc/curaengine/default.nix +++ b/pkgs/applications/misc/curaengine/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "curaengine-${version}"; - version = "3.0.3"; + version = "3.2.1"; src = fetchFromGitHub { owner = "Ultimaker"; repo = "CuraEngine"; rev = version; - sha256 = "0x1ss3hppw6062rmmxh0dpnm5cg6r2mp01k0nxyw5riiljj59ydy"; + sha256 = "1yqpp6qhixzni3ik11vbk5kcdrhlz2j4ylzmh8f6c86r4d73a0cp"; }; nativeBuildInputs = [ cmake ]; @@ -18,7 +18,7 @@ stdenv.mkDerivation rec { meta = with stdenv.lib; { description = "A powerful, fast and robust engine for processing 3D models into 3D printing instruction"; - homepage = "https://github.com/Ultimaker/CuraEngine"; + homepage = https://github.com/Ultimaker/CuraEngine; license = licenses.agpl3; platforms = platforms.linux; maintainers = with maintainers; [ abbradar ]; diff --git a/pkgs/applications/misc/deepin-terminal/default.nix b/pkgs/applications/misc/deepin-terminal/default.nix index 12ceb0958f0d..8e64fa698058 100644 --- a/pkgs/applications/misc/deepin-terminal/default.nix +++ b/pkgs/applications/misc/deepin-terminal/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, fetchFromGitHub, pkgconfig, gtk3, vala, cmake, vte, libgee, wnck, zssh, gettext, librsvg, libsecret, json_glib, gobjectIntrospection }: +{ stdenv, fetchurl, fetchFromGitHub, pkgconfig, gtk3, vala, cmake, vte, libgee, wnck, zssh, gettext, librsvg, libsecret, json-glib, gobjectIntrospection }: stdenv.mkDerivation rec { name = "deepin-terminal-${version}"; @@ -30,7 +30,7 @@ stdenv.mkDerivation rec { # For setup hook gobjectIntrospection ]; - buildInputs = [ gtk3 vte libgee wnck librsvg libsecret json_glib ]; + buildInputs = [ gtk3 vte libgee wnck librsvg libsecret json-glib ]; meta = with stdenv.lib; { description = "The default terminal emulation for Deepin"; diff --git a/pkgs/applications/misc/devilspie2/default.nix b/pkgs/applications/misc/devilspie2/default.nix index 4a7c4d7ec304..1ea45c3574a5 100644 --- a/pkgs/applications/misc/devilspie2/default.nix +++ b/pkgs/applications/misc/devilspie2/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "devilspie2-${version}"; - version = "0.42"; + version = "0.43"; src = fetchurl { url = "http://download.savannah.gnu.org/releases/devilspie2/devilspie2_${version}-src.tar.gz"; - sha256 = "119zb9x5i3y4cp30h4113psqxb5d7zxiyijpq02g8kds1wqvrx8i"; + sha256 = "0a7qjl2qd4099kkkbwa1y2fk48s21jlr409lf9mij7mlc9yc3zzc"; }; nativeBuildInputs = [ intltool pkgconfig ]; diff --git a/pkgs/applications/misc/digitalbitbox/default.nix b/pkgs/applications/misc/digitalbitbox/default.nix new file mode 100644 index 000000000000..fbd9d47633a1 --- /dev/null +++ b/pkgs/applications/misc/digitalbitbox/default.nix @@ -0,0 +1,140 @@ +{ stdenv +, autoreconfHook +, curl +, fetchFromGitHub +, git +, libevent +, libtool +, libqrencode +, libudev +, libusb +, makeWrapper +, pkgconfig +, qtbase +, qttools +, qtwebsockets +, qtmultimedia +, udevRule51 ? '' +, SUBSYSTEM=="usb", TAG+="uaccess", TAG+="udev-acl", SYMLINK+="dbb%n", ATTRS{idVendor}=="03eb", ATTRS{idProduct}=="2402" +, '' +, udevRule52 ? '' +, KERNEL=="hidraw*", SUBSYSTEM=="hidraw", ATTRS{idVendor}=="03eb", ATTRS{idProduct}=="2402", TAG+="uaccess", TAG+="udev-acl", SYMLINK+="dbbf%n" +, '' +, writeText +}: + +# Enabling the digitalbitbox program +# +# programs.digitalbitbox.enable = true; +# +# will install the digitalbitbox package and enable the corresponding hardware +# module and is by far the easiest way to get started with the Digital Bitbox on +# NixOS. + +# In case you install the package only, please be aware that you may need to +# apply some udev rules to allow the application to identify and access your +# wallet. In a nixos-configuration, one may accomplish this by enabling the +# digitalbitbox hardware module +# +# hardware.digitalbitbox.enable = true; +# +# or by adding the digitalbitbox package to system.udev.packages +# +# system.udev.packages = [ pkgs.digitalbitbox ]; + +# See https://digitalbitbox.com/start_linux for more information. +let + copyUdevRuleToOutput = name: rule: + "cp ${writeText name rule} $out/etc/udev/rules.d/${name}"; +in stdenv.mkDerivation rec { + name = "digitalbitbox-${version}"; + version = "2.2.2"; + + src = fetchFromGitHub { + owner = "digitalbitbox"; + repo = "dbb-app"; + rev = "v${version}"; + sha256 = "1r77fvqrlaryzij5dfbnigzhvg1d12g96qb2gp8dy3xph1j0k3s1"; + }; + + nativeBuildInputs = with stdenv.lib; [ + autoreconfHook + curl + git + makeWrapper + pkgconfig + qttools + ]; + + buildInputs = with stdenv.lib; [ + libevent + libtool + libudev + libusb + libqrencode + + qtbase + qtwebsockets + qtmultimedia + ]; + + LUPDATE="${qttools.dev}/bin/lupdate"; + LRELEASE="${qttools.dev}/bin/lrelease"; + MOC="${qtbase.dev}/bin/moc"; + QTDIR="${qtbase.dev}"; + RCC="${qtbase.dev}/bin/rcc"; + UIC="${qtbase.dev}/bin/uic"; + + configureFlags = [ + "--enable-libusb" + ]; + + hardeningDisable = [ + "format" + ]; + + postInstall = '' + mkdir -p "$out/lib" + cp src/libbtc/.libs/*.so* $out/lib + cp src/libbtc/src/secp256k1/.libs/*.so* $out/lib + cp src/hidapi/libusb/.libs/*.so* $out/lib + cp src/univalue/.libs/*.so* $out/lib + + # [RPATH][patchelf] Avoid forbidden reference error + rm -rf $PWD + + wrapProgram "$out/bin/dbb-cli" --prefix LD_LIBRARY_PATH : "$out/lib" + wrapProgram "$out/bin/dbb-app" --prefix LD_LIBRARY_PATH : "$out/lib" + + # Provide udev rules as documented in https://digitalbitbox.com/start_linux + mkdir -p "$out/etc/udev/rules.d" + ${copyUdevRuleToOutput "51-hid-digitalbox.rules" udevRule51} + ${copyUdevRuleToOutput "52-hid-digitalbox.rules" udevRule52} + ''; + + meta = with stdenv.lib; { + description = "A QT based application for the Digital Bitbox hardware wallet"; + longDescription = '' + Digital Bitbox provides dbb-app, a GUI tool, and dbb-cli, a CLI tool, to manage Digital Bitbox devices. + + This package will only install the dbb-app and dbb-cli, however; in order for these applications to identify and access Digital Bitbox devices, one may want to enable the digitalbitbox hardware module by adding + + hardware.digitalbitbox.enable = true; + + to the configuration which is equivalent to adding this package to the udev.packages list. + + + The easiest way to use the digitalbitbox package in NixOS is by adding + + programs.digitalbitbox.enable = true; + + to the configuration which installs the package and enables the hardware module. + ''; + homepage = "https://digitalbitbox.com/"; + license = licenses.mit; + maintainers = with maintainers; [ + vidbina + ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/applications/misc/electrum/default.nix b/pkgs/applications/misc/electrum/default.nix index 6835db35b606..40fc10a56731 100644 --- a/pkgs/applications/misc/electrum/default.nix +++ b/pkgs/applications/misc/electrum/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, python3, python3Packages, zbar }: +{ stdenv, fetchurl, python3, python3Packages, zbar, fetchpatch }: python3Packages.buildPythonApplication rec { name = "electrum-${version}"; @@ -9,6 +9,15 @@ python3Packages.buildPythonApplication rec { sha256 = "01dnqiazjl2avrmdiq68absjvcfv24446y759z2s9dwk8ywzjkrg"; }; + patches = [ + # Trezor compat patch should be included in electrum > 3.0.6 + (fetchpatch { + name = "trezor-compat.patch"; + url = "https://patch-diff.githubusercontent.com/raw/spesmilo/electrum/pull/3621.patch"; + sha256 = "1bk1r2ikhnvw1fpfh71y4za2lnskcbkv50k8ynjxi5slx2wrfpl0"; + }) + ]; + propagatedBuildInputs = with python3Packages; [ dnspython ecdsa diff --git a/pkgs/applications/misc/finalterm/default.nix b/pkgs/applications/misc/finalterm/default.nix index ee16ba24ed46..93e5d297ffb3 100644 --- a/pkgs/applications/misc/finalterm/default.nix +++ b/pkgs/applications/misc/finalterm/default.nix @@ -1,6 +1,6 @@ { stdenv, lib, fetchFromGitHub, makeWrapper -, pkgconfig, cmake, libxml2, vala_0_26, intltool, libmx, gnome3, gtk3, gtk_doc -, keybinder3, clutter_gtk, libnotify +, pkgconfig, cmake, libxml2, vala_0_26, intltool, libmx, gnome3, gtk3, gtk-doc +, keybinder3, clutter-gtk, libnotify , libxkbcommon, xorg, udev , bashInteractive }: @@ -19,8 +19,8 @@ stdenv.mkDerivation { nativeBuildInputs = [ pkgconfig cmake intltool makeWrapper ]; buildInputs = [ - vala_0_26 gtk3 gnome3.gnome_common gnome3.libgee - gtk_doc clutter_gtk libmx keybinder3 libxml2 libnotify + vala_0_26 gtk3 gnome3.gnome-common gnome3.libgee + gtk-doc clutter-gtk libmx keybinder3 libxml2 libnotify xorg.libpthreadstubs xorg.libXdmcp xorg.libxshmfence libxkbcommon ] ++ optionals stdenv.isLinux [ udev ]; diff --git a/pkgs/applications/misc/font-manager/default.nix b/pkgs/applications/misc/font-manager/default.nix index 8c63c8565781..be853e4213bc 100644 --- a/pkgs/applications/misc/font-manager/default.nix +++ b/pkgs/applications/misc/font-manager/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub, automake, autoconf, libtool, - pkgconfig, file, intltool, libxml2, json_glib , sqlite, itstool, + pkgconfig, file, intltool, libxml2, json-glib , sqlite, itstool, librsvg, vala_0_34, gnome3, wrapGAppsHook, gobjectIntrospection }: @@ -20,7 +20,7 @@ stdenv.mkDerivation rec { file intltool vala_0_34 - gnome3.yelp_tools + gnome3.yelp-tools wrapGAppsHook # For setup hook gobjectIntrospection @@ -28,7 +28,7 @@ stdenv.mkDerivation rec { buildInputs = [ libxml2 - json_glib + json-glib sqlite itstool librsvg diff --git a/pkgs/applications/misc/gammu/default.nix b/pkgs/applications/misc/gammu/default.nix index 939b38ca29f7..f05514f3fc58 100644 --- a/pkgs/applications/misc/gammu/default.nix +++ b/pkgs/applications/misc/gammu/default.nix @@ -8,13 +8,13 @@ with stdenv.lib; stdenv.mkDerivation rec { name = "gammu-${version}"; - version = "1.38.2"; + version = "1.39.0"; src = fetchFromGitHub { owner = "gammu"; repo = "gammu"; rev = version; - sha256 = "1rk3p3sjyy6n6mlqs4qgyxna4swrh1zm7b77npxv8j341wxj3khv"; + sha256 = "1hr053z2l5mjgip83fsxnd1rqsp5gwywzagzrgdg243apn1nz0gs"; }; patches = [ ./bashcomp-dir.patch ./systemd.patch ]; diff --git a/pkgs/applications/misc/gksu/default.nix b/pkgs/applications/misc/gksu/default.nix index 509a54881cce..d4f2a056a9f6 100644 --- a/pkgs/applications/misc/gksu/default.nix +++ b/pkgs/applications/misc/gksu/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, gtk2, gnome3, libgksu, - intltool, libstartup_notification, gtk_doc, wrapGAppsHook + intltool, libstartup_notification, gtk-doc, wrapGAppsHook }: stdenv.mkDerivation rec { @@ -13,11 +13,11 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ - pkgconfig intltool gtk_doc wrapGAppsHook + pkgconfig intltool gtk-doc wrapGAppsHook ]; buildInputs = [ - gtk2 gnome3.gconf libstartup_notification gnome3.libgnome_keyring + gtk2 gnome3.gconf libstartup_notification gnome3.libgnome-keyring ]; propagatedBuildInputs = [ diff --git a/pkgs/applications/misc/gmtp/default.nix b/pkgs/applications/misc/gmtp/default.nix index dfe61b57b43d..776a10b7e0c5 100644 --- a/pkgs/applications/misc/gmtp/default.nix +++ b/pkgs/applications/misc/gmtp/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, libmtp, libid3tag, flac, libvorbis, gtk3 -, gsettings_desktop_schemas, wrapGAppsHook +, gsettings-desktop-schemas, wrapGAppsHook }: let version = "1.3.10"; in @@ -13,7 +13,7 @@ stdenv.mkDerivation { }; nativeBuildInputs = [ pkgconfig wrapGAppsHook ]; - buildInputs = [ libmtp libid3tag flac libvorbis gtk3 gsettings_desktop_schemas ]; + buildInputs = [ libmtp libid3tag flac libvorbis gtk3 gsettings-desktop-schemas ]; enableParallelBuilding = true; diff --git a/pkgs/applications/misc/gpx-viewer/default.nix b/pkgs/applications/misc/gpx-viewer/default.nix index a7485c4ee681..1810d6d5c476 100644 --- a/pkgs/applications/misc/gpx-viewer/default.nix +++ b/pkgs/applications/misc/gpx-viewer/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, intltool, pkgconfig, gnome3, shared_mime_info, desktop_file_utils, wrapGAppsHook }: +{ stdenv, fetchurl, intltool, pkgconfig, gnome3, shared-mime-info, desktop-file-utils, wrapGAppsHook }: stdenv.mkDerivation rec { name = "gpx-viewer-${version}"; @@ -17,8 +17,8 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ intltool pkgconfig - shared_mime_info # For update-mime-database - desktop_file_utils # For update-desktop-database + shared-mime-info # For update-mime-database + desktop-file-utils # For update-desktop-database wrapGAppsHook # Fix error: GLib-GIO-ERROR **: No GSettings schemas are installed on the system ]; buildInputs = with gnome3; [ gdl libchamplain defaultIconTheme ]; diff --git a/pkgs/applications/misc/gramps/default.nix b/pkgs/applications/misc/gramps/default.nix index 8b66b23df01a..ace91bfafffd 100644 --- a/pkgs/applications/misc/gramps/default.nix +++ b/pkgs/applications/misc/gramps/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub, gtk3, pythonPackages, intltool, - pango, gsettings_desktop_schemas, + pango, gsettings-desktop-schemas, # Optional packages: enableOSM ? true, osm-gps-map }: diff --git a/pkgs/applications/misc/guake/default.nix b/pkgs/applications/misc/guake/default.nix index 21a551bd6314..0a2a17fc8fa0 100644 --- a/pkgs/applications/misc/guake/default.nix +++ b/pkgs/applications/misc/guake/default.nix @@ -17,7 +17,7 @@ with lib; let inherit (python2Packages) python; - inputs = [ dbus gtk2 gconf python libutempter vte keybinder gnome3.gnome_common ]; + inputs = [ dbus gtk2 gconf python libutempter vte keybinder gnome3.gnome-common ]; pyPath = makeSearchPathOutput "lib" python.sitePackages (attrVals [ "dbus-python" "notify" "pyGtkGlade" "pyxdg" ] python2Packages ++ [ gnome2.gnome_python ]); in stdenv.mkDerivation rec { name = "guake-${version}"; diff --git a/pkgs/applications/misc/gutenberg/default.nix b/pkgs/applications/misc/gutenberg/default.nix new file mode 100644 index 000000000000..7a04bd7194f2 --- /dev/null +++ b/pkgs/applications/misc/gutenberg/default.nix @@ -0,0 +1,35 @@ +{ stdenv, fetchFromGitHub, rustPlatform, cmake, CoreServices, cf-private }: + +rustPlatform.buildRustPackage rec { + name = "gutenberg-${version}"; + version = "0.3.1"; + + src = fetchFromGitHub { + owner = "Keats"; + repo = "gutenberg"; + rev = "v${version}"; + sha256 = "03zhbwxp4dbqydiydx0hpp3vpg769zzn5i95h2sl868mpfia8gyd"; + }; + + cargoSha256 = "0441lbmxx16aar6fn651ihk3psrx0lk3qdbbyih05xjlkkbk1qxs"; + + nativeBuildInputs = [ cmake ]; + buildInputs = stdenv.lib.optionals stdenv.isDarwin [ CoreServices cf-private ]; + + postInstall = '' + install -D -m 444 completions/gutenberg.bash \ + -t $out/share/bash-completion/completions + install -D -m 444 completions/_gutenberg \ + -t $out/share/zsh/site-functions + install -D -m 444 completions/gutenberg.fish \ + -t $out/share/fish/vendor_completions.d + ''; + + meta = with stdenv.lib; { + description = "An opinionated static site generator with everything built-in"; + homepage = https://www.getgutenberg.io; + license = licenses.mit; + maintainers = []; + platforms = platforms.all; + }; +} diff --git a/pkgs/applications/misc/hamster-time-tracker/default.nix b/pkgs/applications/misc/hamster-time-tracker/default.nix index 51a14fb20d0b..105f7beb98fe 100644 --- a/pkgs/applications/misc/hamster-time-tracker/default.nix +++ b/pkgs/applications/misc/hamster-time-tracker/default.nix @@ -1,6 +1,6 @@ -{ stdenv, fetchzip, pythonPackages, docbook2x, libxslt, gnome_doc_utils -, intltool, dbus_glib, gnome_python, dbus -, hicolor_icon_theme +{ stdenv, fetchzip, pythonPackages, docbook2x, libxslt, gnome-doc-utils +, intltool, dbus-glib, gnome_python, dbus +, hicolor-icon-theme }: # TODO: Add optional dependency 'wnck', for "workspace tracking" support. Fixes @@ -18,7 +18,7 @@ pythonPackages.buildPythonApplication rec { }; buildInputs = [ - docbook2x libxslt gnome_doc_utils intltool dbus_glib hicolor_icon_theme + docbook2x libxslt gnome-doc-utils intltool dbus-glib hicolor-icon-theme ]; propagatedBuildInputs = with pythonPackages; [ pygobject2 pygtk pyxdg gnome_python dbus-python ]; diff --git a/pkgs/applications/misc/hugo/default.nix b/pkgs/applications/misc/hugo/default.nix index 86b806a916c3..f984cb712c7a 100644 --- a/pkgs/applications/misc/hugo/default.nix +++ b/pkgs/applications/misc/hugo/default.nix @@ -2,23 +2,23 @@ buildGoPackage rec { name = "hugo-${version}"; - version = "0.32.2"; + version = "0.36.1"; goPackagePath = "github.com/gohugoio/hugo"; src = fetchFromGitHub { - owner = "gohugoio"; - repo = "hugo"; - rev = "v${version}"; - sha256 = "0k62sg9rvr4aqzh1r60m456cw8mj6kxjpri2nnj4c2dxmvll8qhr"; + owner = "gohugoio"; + repo = "hugo"; + rev = "v${version}"; + sha256 = "179lzkd6f81rssgcwlngx2mhr9nvbj0rsh6yjbf1fsrpxfzr2q9z"; }; goDeps = ./deps.nix; - meta = { + meta = with stdenv.lib; { description = "A fast and modern static website engine."; homepage = https://gohugo.io; - maintainers = with stdenv.lib.maintainers; [ schneefux ]; - license = stdenv.lib.licenses.asl20; + license = licenses.asl20; + maintainers = with maintainers; [ schneefux ]; }; } diff --git a/pkgs/applications/misc/hugo/deps.nix b/pkgs/applications/misc/hugo/deps.nix index 6c870833d1af..cf55ef4b64b2 100644 --- a/pkgs/applications/misc/hugo/deps.nix +++ b/pkgs/applications/misc/hugo/deps.nix @@ -32,8 +32,8 @@ fetch = { type = "git"; url = "https://github.com/alecthomas/chroma"; - rev = "c9f612c1940a4951cd2b55811744632a7b3b3bb2"; - sha256 = "0s1mzb175s96adxfx5vhyazpzfq9j4dzx4sr4n8gj7r8afkqys8h"; + rev = "df4ec264daccb2ecb17bde9134830100701199c5"; + sha256 = "1snw7byfkfvvw0579jc0yxk79j1v1rb0jdcvivfsalh064zmjdvd"; }; } { @@ -59,8 +59,8 @@ fetch = { type = "git"; url = "https://github.com/cpuguy83/go-md2man"; - rev = "8d868be6e9bf9d5350910bab97a050e49887600f"; - sha256 = "0vy096wzkq1z59in1if486k0adaj1idvma0ax9z1igh9qpq53vd9"; + rev = "48d8747a2ca13185e7cc8efe6e9fc196a83f71a5"; + sha256 = "01hpll16rvxhnvv35vs3z8p51x54c5jyl1gjdm0g7kwfwp2chvjx"; }; } { @@ -72,15 +72,6 @@ sha256 = "0cbf511ppsa6hf59mdl7nbyn2b2n71y0bpkzbmfkdqjhanqh1lqz"; }; } - { - goPackagePath = "github.com/dchest/cssmin"; - fetch = { - type = "git"; - url = "https://github.com/dchest/cssmin"; - rev = "fb8d9b44afdc258bfff6052d3667521babcb2239"; - sha256 = "09sdijfx5d05z4cd5k6lhl7k3kbpdf2amzlngv15h5v0fff9qw4s"; - }; - } { goPackagePath = "github.com/disintegration/imaging"; fetch = { @@ -113,8 +104,26 @@ fetch = { type = "git"; url = "https://github.com/fsnotify/fsnotify"; - rev = "4da3e2cfbabc9f751898f250b49f2439785783a1"; - sha256 = "1y2l9jaf99j6gidcfdgq3hifxyiwv4f7awpll80p170ixdbqxvl3"; + rev = "c2828203cd70a50dcccfb2761f8b1f8ceef9a8e9"; + sha256 = "07va9crci0ijlivbb7q57d2rz9h27zgn2fsm60spjsqpdbvyrx4g"; + }; + } + { + goPackagePath = "github.com/gobuffalo/envy"; + fetch = { + type = "git"; + url = "https://github.com/gobuffalo/envy"; + rev = "50fabbbaf1e65fc9b739f37a00590c396485d84d"; + sha256 = "0js2hggb1gybk28pk3hcsb1m6rswfdzvvr194z4my4za09ly5jax"; + }; + } + { + goPackagePath = "github.com/gobwas/glob"; + fetch = { + type = "git"; + url = "https://github.com/gobwas/glob"; + rev = "19c076cdf202b3d1c0489bdfa2f2f289f634474b"; + sha256 = "0176psz3m0pks0ka6pb62g7ccq5izzj0i7c0j20lb7dp3kawphxs"; }; } { @@ -122,8 +131,8 @@ fetch = { type = "git"; url = "https://github.com/gorilla/websocket"; - rev = "d965e9adc66deebadcc7d0c6c7598e2a4baa7838"; - sha256 = "0ka8pvby06farlji7pixlrk3zb962qp5xarvy2vxnfrdzlarv7xb"; + rev = "f37d1588608ec036fa9b0b7b8afbde47dc06aea9"; + sha256 = "1y0z7k4yi8aaw6yjm8s92hvbkyc51b5azpiywminjj1a84czvzvq"; }; } { @@ -131,8 +140,8 @@ fetch = { type = "git"; url = "https://github.com/hashicorp/go-immutable-radix"; - rev = "8aac2701530899b64bdea735a1de8da899815220"; - sha256 = "032w4pk4gd5lwwgnvhh52xnrgyp7lgmlxsfs47gnxkgkya1x7lw6"; + rev = "7f3cd4390caab3250a57f30efdb2a65dd7649ecf"; + sha256 = "13nv1dac6i2mjdy8vsd4vwawwja78vggdjcnj1xfykg2k8jbkphv"; }; } { @@ -140,8 +149,8 @@ fetch = { type = "git"; url = "https://github.com/hashicorp/golang-lru"; - rev = "0a025b7e63adc15a622f29b0b2c4c3848243bbf6"; - sha256 = "1iq7lbpsz7ks052mpznmkf8s4k43p51z4dik2n9ivrxk666q2wxi"; + rev = "0fb14efe8c47ae851c0034ed7a448854d3d34cf3"; + sha256 = "0vg4yn3088ym4sj1d34kr13lp4v5gya7r2nxshp2bz70n46fsqn2"; }; } { @@ -163,12 +172,12 @@ }; } { - goPackagePath = "github.com/kardianos/osext"; + goPackagePath = "github.com/joho/godotenv"; fetch = { type = "git"; - url = "https://github.com/kardianos/osext"; - rev = "ae77be60afb1dcacde03767a8c37337fad28ac14"; - sha256 = "056dkgxrqjj5r18bnc3knlpgdz5p3yvp12y4y978hnsfhwaqvbjz"; + url = "https://github.com/joho/godotenv"; + rev = "6bb08516677f8c8274c557fc801bee9ab564ab2c"; + sha256 = "0jqczq5x5zwgs29vrmq87335c99gi5jrvxkwcpidz98yqg95db4f"; }; } { @@ -185,8 +194,8 @@ fetch = { type = "git"; url = "https://github.com/magiconair/properties"; - rev = "49d762b9817ba1c2e9d0c69183c2b4a8b8f1d934"; - sha256 = "0cnvcd4q88nvxk3q9617dcis2kng2xxsx3iivi5xs8azk290lpyy"; + rev = "2c9e9502788518c97fe44e8955cd069417ee89df"; + sha256 = "1w0rl9rla61m0qbha75jg48yiq1vs91sfy96rgqa6nags9v9b1rl"; }; } { @@ -194,8 +203,8 @@ fetch = { type = "git"; url = "https://github.com/markbates/inflect"; - rev = "a12c3aec81a6a938bf584a4bac567afed9256586"; - sha256 = "0mawr6z9nav4f5j0nmjdxg9lbfhr7wz8zi34g7b6wndmzyf8jbsd"; + rev = "80fa1ea41b0dc859816314ab0b85f07a6bc57923"; + sha256 = "0fmpfcz8g0qsb6h94yqpcms2bdb68qac706b54x0k1crfzl1d1mj"; }; } { @@ -216,13 +225,31 @@ sha256 = "0hlqcwx6qqgy3vs13r10wn0d9x0xmww1v9jm09y2dp1ykgbampnk"; }; } + { + goPackagePath = "github.com/mitchellh/go-homedir"; + fetch = { + type = "git"; + url = "https://github.com/mitchellh/go-homedir"; + rev = "b8bc1bf767474819792c23f32d8286a45736f1c6"; + sha256 = "13ry4lylalkh4g2vny9cxwvryslzyzwp9r92z0b10idhdq3wad1q"; + }; + } { goPackagePath = "github.com/mitchellh/mapstructure"; fetch = { type = "git"; url = "https://github.com/mitchellh/mapstructure"; - rev = "06020f85339e21b2478f756a78e295255ffa4d6a"; - sha256 = "12zb5jh7ri4vna3f24y9g10nzrnz9wbvwnk29wjk3vg0ljia64s9"; + rev = "00c29f56e2386353d58c599509e8dc3801b0d716"; + sha256 = "1vw8fvhax0d567amgvxr7glcl12lvzg2sbzs007q5k5bbwn1szyb"; + }; + } + { + goPackagePath = "github.com/muesli/smartcrop"; + fetch = { + type = "git"; + url = "https://github.com/muesli/smartcrop"; + rev = "c2a0373a193bac1daf8b6691e2ece069c5d7ac7f"; + sha256 = "1jv68g9wddm2a1kf838anjnr4w17k7sqzz01h4z2lfashw3nanar"; }; } { @@ -230,8 +257,8 @@ fetch = { type = "git"; url = "https://github.com/nicksnyder/go-i18n"; - rev = "aa0ce51472e0a9982717fd19cf02cb08b1e433aa"; - sha256 = "0355fxpd69wnw56m6dak8k7rlw3q36bql8algg3jkjnxjpgfii4p"; + rev = "ec04da47793482067e2e376d810e1622277368e4"; + sha256 = "1c7ip5jidvssr8d4dbx9nchf99m13wblgaz630f7wm73y99dc3lr"; }; } { @@ -239,8 +266,8 @@ fetch = { type = "git"; url = "https://github.com/olekukonko/tablewriter"; - rev = "65fec0d89a572b4367094e2058d3ebe667de3b60"; - sha256 = "116waspmr33dqq3zxj2msnqp2f5v2b6ihk3rxqj7gz25rmcxh5wp"; + rev = "b8a9be070da40449e501c3c4730a889e42d87a9e"; + sha256 = "1z9frlk9avqhzjv6zz2rg7mvdhzcr9acdgagblijwwkx01f02hw7"; }; } { @@ -248,8 +275,8 @@ fetch = { type = "git"; url = "https://github.com/pelletier/go-toml"; - rev = "0131db6d737cfbbfb678f8b7d92e55e27ce46224"; - sha256 = "10sz1bh45346wdv8i3nffdmpfh8fb6xd0b3r474cs2mk961pw73v"; + rev = "acdc4509485b587f5e675510c4f2c63e90ff68a8"; + sha256 = "1y5m9pngxhsfzcnxh8ma5nsllx74wn0jr47p2n6i3inrjqxr12xh"; }; } { @@ -257,8 +284,8 @@ fetch = { type = "git"; url = "https://github.com/russross/blackfriday"; - rev = "6d1ef893fcb01b4f50cb6e57ed7df3e2e627b6b2"; - sha256 = "13p2xq5624b9j2f6j6j76j1h4l2lvmh7w6vcv2f5xsvzjy779r27"; + rev = "55d61fa8aa702f59229e6cff85793c22e580eaf5"; + sha256 = "0qmavm5d14kj6im6sqzpqnlhpy524428vkn4hnfwknndr9rycmn0"; }; } { @@ -275,8 +302,8 @@ fetch = { type = "git"; url = "https://github.com/spf13/afero"; - rev = "57afd63c68602b63ed976de00dd066ccb3c319db"; - sha256 = "0jf9v16m7k46j3mgw469yilhs5p3i32qvzi5954cqyigs6zzqbnk"; + rev = "bbf41cb36dffe15dff5bf7e18c447801e7ffe163"; + sha256 = "19jgsm6y1yp99h0fr77rhamdsn34r8545if7y9q377l3phrz2s0l"; }; } { @@ -284,8 +311,8 @@ fetch = { type = "git"; url = "https://github.com/spf13/cast"; - rev = "acbeb36b902d72a7a4c18e8f3241075e7ab763e4"; - sha256 = "0w25s6gjbbwv47b9208hysyqqphd6pib3d2phg24mjy4wigkm050"; + rev = "8965335b8c7107321228e3e3702cab9832751bac"; + sha256 = "177bk7lq40jbgv9p9r80aydpaccfk8ja3a7jjhfwiwk9r1pa4rr2"; }; } { @@ -293,8 +320,8 @@ fetch = { type = "git"; url = "https://github.com/spf13/cobra"; - rev = "ccaecb155a2177302cb56cae929251a256d0f646"; - sha256 = "1zm89akryx6x0vzvn50736z732gdm3jsx5898annr0zr1cfpf443"; + rev = "be77323fc05148ef091e83b3866c0d47c8e74a8b"; + sha256 = "0kl0psbdg8cyznwvq13sva6r4ggmhwzfxdjmkl2vqhy83xq3a6yn"; }; } { @@ -311,8 +338,8 @@ fetch = { type = "git"; url = "https://github.com/spf13/jwalterweatherman"; - rev = "12bd96e66386c1960ab0f74ced1362f66f552f7b"; - sha256 = "1abvqd1dl3m7mxv44wvl0vwd50l6qpndzrxk28vyb77x41rc8b2g"; + rev = "7c0cea34c8ece3fbeb2b27ab9b59511d360fb394"; + sha256 = "132p84i20b9s5r6fs597lsa6648vd415ch7c0d018vm8smzqpd0h"; }; } { @@ -329,8 +356,8 @@ fetch = { type = "git"; url = "https://github.com/spf13/pflag"; - rev = "4c012f6dcd9546820e378d0bdda4d8fc772cdfea"; - sha256 = "0plmm67lkm25ir0lczwh7hmanyilrs1vxmbp8a0dyr282ji1dqm5"; + rev = "ee5fd03fd6acfd43e44aea0b4135958546ed8e73"; + sha256 = "1fgb1ph3vrqcpdvypp3c1fwj15r587l9yvv5wqcq08shln5rbsnk"; }; } { @@ -365,8 +392,8 @@ fetch = { type = "git"; url = "https://go.googlesource.com/net"; - rev = "d866cfc389cec985d6fda2859936a575a55a3ab6"; - sha256 = "10iahqcsiih5hgmqw8yfgv5b3fimfwl1skxg5062avcjjks59f03"; + rev = "cbe0f9307d0156177f9dd5dc85da1a31abc5f2fb"; + sha256 = "1hmpqkxh97ayyy0xcdvf1bwirwja4wyin3sh0fzjlh93aqmqgylf"; }; } { @@ -383,8 +410,8 @@ fetch = { type = "git"; url = "https://go.googlesource.com/sys"; - rev = "83801418e1b59fb1880e363299581ee543af32ca"; - sha256 = "0ilykaanvnzb27d42kmbr4i37hcn7hgqbx98z945gy63aa8dskji"; + rev = "37707fdb30a5b38865cfb95e5aab41707daec7fd"; + sha256 = "1abrr2507a737hdqv4q7pw7hv6ls9pdiq9crhdi52r3gcz6hvizg"; }; } { @@ -392,8 +419,8 @@ fetch = { type = "git"; url = "https://go.googlesource.com/text"; - rev = "e19ae1496984b1c655b8044a65c0300a3c878dd3"; - sha256 = "1cvnnx8nwx5c7gr6ajs7sldhbqh52n7h6fsa3i21l2lhx6xrsh4w"; + rev = "9e2b64d659da1afe07ce1c9c1dfefc09d188f21e"; + sha256 = "00ichxdybvs76gj805j828qxg7x4h4v64pq1s56ydaw07ja6lmry"; }; } { @@ -401,8 +428,8 @@ fetch = { type = "git"; url = "https://gopkg.in/yaml.v2"; - rev = "287cf08546ab5e7e37d55a84f7ed3fd1db036de5"; - sha256 = "15502klds9wwv567vclb9kx95gs8lnyzn4ybsk6l9fc7a67lk831"; + rev = "d670f9405373e636a5a2765eea47fac0c9bc91a4"; + sha256 = "1w1xid51n8v1mydn2m3vgggw8qgpd5a5sr62snsc77d99fpjsrs0"; }; } ] diff --git a/pkgs/applications/misc/jekyll/basic/Gemfile.lock b/pkgs/applications/misc/jekyll/basic/Gemfile.lock index 972403a47544..d18546cb36f8 100644 --- a/pkgs/applications/misc/jekyll/basic/Gemfile.lock +++ b/pkgs/applications/misc/jekyll/basic/Gemfile.lock @@ -14,7 +14,7 @@ GEM eventmachine (>= 0.12.9) http_parser.rb (~> 0.6.0) eventmachine (1.2.5) - ffi (1.9.21) + ffi (1.9.23) forwardable-extended (2.6.0) gemoji (3.0.0) html-pipeline (2.7.1) @@ -23,7 +23,7 @@ GEM http_parser.rb (0.6.0) i18n (0.9.5) concurrent-ruby (~> 1.0) - jekyll (3.7.2) + jekyll (3.7.3) addressable (~> 2.4) colorator (~> 1.0) em-websocket (~> 0.5) diff --git a/pkgs/applications/misc/jekyll/basic/gemset.nix b/pkgs/applications/misc/jekyll/basic/gemset.nix index 32e90b07a263..b5b21dec4382 100644 --- a/pkgs/applications/misc/jekyll/basic/gemset.nix +++ b/pkgs/applications/misc/jekyll/basic/gemset.nix @@ -53,10 +53,10 @@ ffi = { source = { remotes = ["https://rubygems.org"]; - sha256 = "0c2dl10pi6a30kcvx2s6p2v1wb4kbm48iv38kmz2ff600nirhpb8"; + sha256 = "0zw6pbyvmj8wafdc7l5h7w20zkp1vbr2805ql5d941g2b20pk4zr"; type = "gem"; }; - version = "1.9.21"; + version = "1.9.23"; }; forwardable-extended = { source = { @@ -104,10 +104,10 @@ dependencies = ["addressable" "colorator" "em-websocket" "i18n" "jekyll-sass-converter" "jekyll-watch" "kramdown" "liquid" "mercenary" "pathutil" "rouge" "safe_yaml"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "05f61rqwz1isci7by34zyz38ah2rv5b8i5h618cxcl97hwqps8n2"; + sha256 = "1k8pz95yiwxj6h645sxwckl227lah97lshv9xxrddhldxwf0n0ff"; type = "gem"; }; - version = "3.7.2"; + version = "3.7.3"; }; jekyll-avatar = { dependencies = ["jekyll"]; diff --git a/pkgs/applications/misc/jekyll/default.nix b/pkgs/applications/misc/jekyll/default.nix index 418b4ea466ea..ce3c318f6780 100644 --- a/pkgs/applications/misc/jekyll/default.nix +++ b/pkgs/applications/misc/jekyll/default.nix @@ -2,6 +2,8 @@ , withOptionalDependencies ? false }: +# Bundix: +# nix-shell -p bundix zlib bundlerEnv rec { name = pname + "-" + version; pname = "jekyll"; diff --git a/pkgs/applications/misc/jekyll/full/Gemfile b/pkgs/applications/misc/jekyll/full/Gemfile index 41f33c6e9ea7..aba5e06e3769 100644 --- a/pkgs/applications/misc/jekyll/full/Gemfile +++ b/pkgs/applications/misc/jekyll/full/Gemfile @@ -10,7 +10,7 @@ gem "jemoji" # Optional dependencies: gem "coderay", "~> 1.1.0" gem "jekyll-coffeescript" -gem "jekyll-docs" +#gem "jekyll-docs" gem "jekyll-feed", "~> 0.9" gem "jekyll-gist" gem "jekyll-paginate" diff --git a/pkgs/applications/misc/jekyll/full/Gemfile.lock b/pkgs/applications/misc/jekyll/full/Gemfile.lock index d070ad66f65c..190f1d66479d 100644 --- a/pkgs/applications/misc/jekyll/full/Gemfile.lock +++ b/pkgs/applications/misc/jekyll/full/Gemfile.lock @@ -25,7 +25,7 @@ GEM faraday (0.14.0) multipart-post (>= 1.2, < 3) fast-stemmer (1.0.2) - ffi (1.9.21) + ffi (1.9.23) forwardable-extended (2.6.0) gemoji (3.0.0) html-pipeline (2.7.1) @@ -34,7 +34,7 @@ GEM http_parser.rb (0.6.0) i18n (0.9.5) concurrent-ruby (~> 1.0) - jekyll (3.7.2) + jekyll (3.7.3) addressable (~> 2.4) colorator (~> 1.0) em-websocket (~> 0.5) @@ -52,8 +52,6 @@ GEM jekyll-coffeescript (1.1.1) coffee-script (~> 2.2) coffee-script-source (~> 1.11.1) - jekyll-docs (3.7.2) - jekyll (= 3.7.2) jekyll-feed (0.9.3) jekyll (~> 3.3) jekyll-gist (1.5.0) @@ -136,7 +134,6 @@ DEPENDENCIES jekyll jekyll-avatar jekyll-coffeescript - jekyll-docs jekyll-feed (~> 0.9) jekyll-gist jekyll-mentions diff --git a/pkgs/applications/misc/jekyll/full/gemset.nix b/pkgs/applications/misc/jekyll/full/gemset.nix index f41acb661910..3a115f8a4b0e 100644 --- a/pkgs/applications/misc/jekyll/full/gemset.nix +++ b/pkgs/applications/misc/jekyll/full/gemset.nix @@ -112,10 +112,10 @@ ffi = { source = { remotes = ["https://rubygems.org"]; - sha256 = "0c2dl10pi6a30kcvx2s6p2v1wb4kbm48iv38kmz2ff600nirhpb8"; + sha256 = "0zw6pbyvmj8wafdc7l5h7w20zkp1vbr2805ql5d941g2b20pk4zr"; type = "gem"; }; - version = "1.9.21"; + version = "1.9.23"; }; forwardable-extended = { source = { @@ -163,10 +163,10 @@ dependencies = ["addressable" "colorator" "em-websocket" "i18n" "jekyll-sass-converter" "jekyll-watch" "kramdown" "liquid" "mercenary" "pathutil" "rouge" "safe_yaml"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "05f61rqwz1isci7by34zyz38ah2rv5b8i5h618cxcl97hwqps8n2"; + sha256 = "1k8pz95yiwxj6h645sxwckl227lah97lshv9xxrddhldxwf0n0ff"; type = "gem"; }; - version = "3.7.2"; + version = "3.7.3"; }; jekyll-avatar = { dependencies = ["jekyll"]; @@ -186,15 +186,6 @@ }; version = "1.1.1"; }; - jekyll-docs = { - dependencies = ["jekyll"]; - source = { - remotes = ["https://rubygems.org"]; - sha256 = "0dw8pvxr0q02rivc0n0v4w6151zi6s212xwl27iam6pjc8skbg9b"; - type = "gem"; - }; - version = "3.7.2"; - }; jekyll-feed = { dependencies = ["jekyll"]; source = { diff --git a/pkgs/applications/misc/jgmenu/default.nix b/pkgs/applications/misc/jgmenu/default.nix index b7b09816abd4..e87288d71287 100644 --- a/pkgs/applications/misc/jgmenu/default.nix +++ b/pkgs/applications/misc/jgmenu/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "jgmenu-${version}"; - version = "0.8"; + version = "0.8.2"; src = fetchFromGitHub { owner = "johanmalm"; repo = "jgmenu"; rev = "v${version}"; - sha256 = "042nvix85a37aalc2rwg4yc2g3wyy6lym3c2ljj2xkl6c1b0c1r7"; + sha256 = "0nflj4fcpz7rcd1s0zlyi5ikxjykkmz3p5w4gzica1fdbyn2l7x3"; }; nativeBuildInputs = [ diff --git a/pkgs/applications/misc/josm/default.nix b/pkgs/applications/misc/josm/default.nix index b908941d2bc9..aec6dc2f58c8 100644 --- a/pkgs/applications/misc/josm/default.nix +++ b/pkgs/applications/misc/josm/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "josm-${version}"; - version = "13265"; + version = "13367"; src = fetchurl { url = "https://josm.openstreetmap.de/download/josm-snapshot-${version}.jar"; - sha256 = "0mmpxmf17lw1j1m1gfz2jrm3qj2416zgbwgcy7xbvn6qcd8k7dr5"; + sha256 = "1yf7cx8159njxid9qa0id7zfkr7dn83rrkgxp9kzkjn25aqji4cf"; }; buildInputs = [ jre8 makeWrapper ]; diff --git a/pkgs/applications/misc/keepass-plugins/keefox/default.nix b/pkgs/applications/misc/keepass-plugins/keefox/default.nix deleted file mode 100644 index 0215c5a71c2f..000000000000 --- a/pkgs/applications/misc/keepass-plugins/keefox/default.nix +++ /dev/null @@ -1,34 +0,0 @@ -{ stdenv, buildEnv, fetchurl, mono, unzip }: - -let - version = "1.6.4"; - drv = stdenv.mkDerivation { - name = "keefox-${version}"; - src = fetchurl { - url = "https://github.com/luckyrat/KeeFox/releases/download/v${version}/${version}.xpi"; - sha256 = "0nj4l9ssyfwbl1pxgxvd2h9q0mqhx7i0yzm4a2xjqlqwam534d1w"; - }; - - meta = { - description = "Keepass plugin for keefox Firefox add-on"; - homepage = http://keefox.org; - platforms = with stdenv.lib.platforms; linux; - license = stdenv.lib.licenses.gpl2; - maintainers = [ stdenv.lib.maintainers.mjanczyk ]; - }; - - buildInputs = [ unzip ]; - - pluginFilename = "KeePassRPC.plgx"; - - unpackCmd = "unzip $src deps/$pluginFilename "; - sourceRoot = "deps"; - - installPhase = '' - mkdir -p $out/lib/dotnet/keepass/ - cp $pluginFilename $out/lib/dotnet/keepass/$pluginFilename - ''; - }; -in - # Mono is required to compile plugin at runtime, after loading. - buildEnv { name = drv.name; paths = [ mono drv ]; } diff --git a/pkgs/applications/misc/keepass-plugins/keepassrpc/default.nix b/pkgs/applications/misc/keepass-plugins/keepassrpc/default.nix new file mode 100644 index 000000000000..b2980bcd8aea --- /dev/null +++ b/pkgs/applications/misc/keepass-plugins/keepassrpc/default.nix @@ -0,0 +1,35 @@ +{ stdenv, buildEnv, fetchurl, mono }: + +let + version = "1.7.3.1"; + drv = stdenv.mkDerivation { + name = "keepassrpc-${version}"; + src = fetchurl { + url = "https://github.com/kee-org/keepassrpc/releases/download/v${version}/KeePassRPC.plgx"; + sha256 = "1y9b35qg27caj3pbaqqzrqpk61hbbd8617ziwdc9vl799i786m9k"; + }; + + meta = with stdenv.lib; { + description = "The KeePassRPC plugin that needs to be installed inside KeePass in order for Kee to be able to connect your browser to your passwords"; + homepage = https://github.com/kee-org/keepassrpc; + platforms = [ "x86_64-linux" ]; + license = licenses.gpl2; + maintainers = with maintainers; [ mjanczyk svsdep ]; + }; + + pluginFilename = "KeePassRPC.plgx"; + + unpackCmd = '' + mkdir deps/ + cp -p $src deps/$pluginFilename + ''; + sourceRoot = "deps"; + + installPhase = '' + mkdir -p $out/lib/dotnet/keepass/ + cp $pluginFilename $out/lib/dotnet/keepass/$pluginFilename + ''; + }; +in + # Mono is required to compile plugin at runtime, after loading. + buildEnv { name = drv.name; paths = [ mono drv ]; } diff --git a/pkgs/applications/misc/keepass/default.nix b/pkgs/applications/misc/keepass/default.nix index bee86cb0ed39..5e492fc621fe 100644 --- a/pkgs/applications/misc/keepass/default.nix +++ b/pkgs/applications/misc/keepass/default.nix @@ -1,11 +1,6 @@ -{ stdenv, lib, fetchurl, buildDotnetPackage, makeWrapper, unzip, makeDesktopItem, icoutils, gtk2, plugins ? [] }: +{ stdenv, lib, fetchurl, buildDotnetPackage, substituteAll, makeWrapper, makeDesktopItem, + unzip, icoutils, gtk2, xorg, xdotool, xsel, plugins ? [] }: -# KeePass looks for plugins in under directory in which KeePass.exe is -# located. It follows symlinks where looking for that directory, so -# buildEnv is not enough to bring KeePass and plugins together. -# -# This derivation patches KeePass to search for plugins in specified -# plugin derivations in the Nix store and nowhere else. with builtins; buildDotnetPackage rec { baseName = "keepass"; version = "2.38"; @@ -19,6 +14,38 @@ with builtins; buildDotnetPackage rec { buildInputs = [ unzip makeWrapper icoutils ]; + patches = [ + (substituteAll { + src = ./fix-paths.patch; + xsel = "${xsel}/bin/xsel"; + xprop = "${xorg.xprop}/bin/xprop"; + xdotool = "${xdotool}/bin/xdotool"; + }) + ]; + + # KeePass looks for plugins in under directory in which KeePass.exe is + # located. It follows symlinks where looking for that directory, so + # buildEnv is not enough to bring KeePass and plugins together. + # + # This derivation patches KeePass to search for plugins in specified + # plugin derivations in the Nix store and nowhere else. + pluginLoadPathsPatch = + let outputLc = toString (add 7 (length plugins)); + patchTemplate = readFile ./keepass-plugins.patch; + loadTemplate = readFile ./keepass-plugins-load.patch; + loads = + lib.concatStrings + (map + (p: replaceStrings ["$PATH$"] [ (unsafeDiscardStringContext (toString p)) ] loadTemplate) + plugins); + in replaceStrings ["$OUTPUT_LC$" "$DO_LOADS$"] [outputLc loads] patchTemplate; + + passAsFile = [ "pluginLoadPathsPatch" ]; + postPatch = '' + sed -i 's/\r*$//' KeePass/Forms/MainForm.cs + patch -p1 <$pluginLoadPathsPatchPath + ''; + preConfigure = '' rm -rvf Build/* find . -name "*.sln" -print -exec sed -i 's/Format Version 10.00/Format Version 11.00/g' {} \; diff --git a/pkgs/applications/misc/keepass/fix-paths.patch b/pkgs/applications/misc/keepass/fix-paths.patch new file mode 100644 index 000000000000..318f8a358985 --- /dev/null +++ b/pkgs/applications/misc/keepass/fix-paths.patch @@ -0,0 +1,87 @@ +diff --git a/KeePass/Native/NativeMethods.Unix.cs b/KeePass/Native/NativeMethods.Unix.cs +index 7495a1c..4ef4727 100644 +--- a/KeePass/Native/NativeMethods.Unix.cs ++++ b/KeePass/Native/NativeMethods.Unix.cs +@@ -128,7 +128,7 @@ namespace KeePass.Native + try + { + Application.DoEvents(); // E.g. for clipboard updates +- string strOutput = NativeLib.RunConsoleApp("xdotool", strParams); ++ string strOutput = NativeLib.RunConsoleApp("@xdotool@", strParams); + Application.DoEvents(); // E.g. for clipboard updates + return (strOutput ?? string.Empty); + } +diff --git a/KeePass/Util/ClipboardUtil.Unix.cs b/KeePass/Util/ClipboardUtil.Unix.cs +index e93a22a..3fd9a2b 100644 +--- a/KeePass/Util/ClipboardUtil.Unix.cs ++++ b/KeePass/Util/ClipboardUtil.Unix.cs +@@ -62,7 +62,7 @@ namespace KeePass.Util + // "-out -selection clipboard"); + // if(str != null) return str; + +- string str = NativeLib.RunConsoleApp("xsel", ++ string str = NativeLib.RunConsoleApp("@xsel@", + "--output --clipboard", null, XSelFlags); + if(str != null) return str; + +@@ -83,10 +83,10 @@ namespace KeePass.Util + if(string.IsNullOrEmpty(str)) + { + // xsel with an empty input can hang, thus use --clear +- if(NativeLib.RunConsoleApp("xsel", "--clear --primary", ++ if(NativeLib.RunConsoleApp("@xsel@", "--clear --primary", + null, XSelFlags) != null) + { +- NativeLib.RunConsoleApp("xsel", "--clear --clipboard", ++ NativeLib.RunConsoleApp("@xsel@", "--clear --clipboard", + null, XSelFlags); + return; + } +@@ -97,10 +97,10 @@ namespace KeePass.Util + } + + // xsel does not support --primary and --clipboard together +- if(NativeLib.RunConsoleApp("xsel", "--input --primary", ++ if(NativeLib.RunConsoleApp("@xsel@", "--input --primary", + str, XSelFlags) != null) + { +- NativeLib.RunConsoleApp("xsel", "--input --clipboard", ++ NativeLib.RunConsoleApp("@xsel@", "--input --clipboard", + str, XSelFlags); + return; + } +diff --git a/KeePassLib/Native/ClipboardU.cs b/KeePassLib/Native/ClipboardU.cs +index ddd8f57..150eb82 100644 +--- a/KeePassLib/Native/ClipboardU.cs ++++ b/KeePassLib/Native/ClipboardU.cs +@@ -27,7 +27,7 @@ namespace KeePassLib.Native + { + internal static class ClipboardU + { +- private const string XSel = "xsel"; ++ private const string XSel = "@xsel@"; + private const string XSelV = "--version"; + private const string XSelR = "--output --clipboard"; + private const string XSelC = "--clear --clipboard"; +diff --git a/KeePassLib/Utility/MonoWorkarounds.cs b/KeePassLib/Utility/MonoWorkarounds.cs +index 0da7019..f6a1022 100644 +--- a/KeePassLib/Utility/MonoWorkarounds.cs ++++ b/KeePassLib/Utility/MonoWorkarounds.cs +@@ -41,7 +41,7 @@ namespace KeePassLib.Utility + { + public static class MonoWorkarounds + { +- private const string AppXDoTool = "xdotool"; ++ private const string AppXDoTool = "@xdotool@"; + + private static Dictionary g_dForceReq = new Dictionary(); + private static Thread g_thFixClip = null; +@@ -303,7 +303,7 @@ namespace KeePassLib.Utility + // } + // else { Debug.Assert(false); } + +- string strWmClass = (NativeLib.RunConsoleApp("xprop", ++ string strWmClass = (NativeLib.RunConsoleApp("@xprop@", + "-id " + strHandle + " WM_CLASS") ?? string.Empty); + + if(strWmClass.IndexOf("\"" + PwDefs.ResClass + "\"", diff --git a/pkgs/applications/misc/keepass/keepass-plugins-load.patch b/pkgs/applications/misc/keepass/keepass-plugins-load.patch new file mode 100644 index 000000000000..ca52e7ef191a --- /dev/null +++ b/pkgs/applications/misc/keepass/keepass-plugins-load.patch @@ -0,0 +1 @@ ++ m_pluginManager.LoadAllPlugins("$PATH$/lib/dotnet/keepass", SearchOption.TopDirectoryOnly, new string[] {}); diff --git a/pkgs/applications/misc/keepass/keepass-plugins.patch b/pkgs/applications/misc/keepass/keepass-plugins.patch new file mode 100644 index 000000000000..cde6e7252bc3 --- /dev/null +++ b/pkgs/applications/misc/keepass/keepass-plugins.patch @@ -0,0 +1,13 @@ +diff --git a/KeePass/Forms/MainForm.cs b/KeePass/Forms/MainForm.cs +index 3d5fca0..4c3f3d4 100644 +--- a/KeePass/Forms/MainForm.cs ++++ b/KeePass/Forms/MainForm.cs +@@ -406,7 +406,$OUTPUT_LC$ @@ namespace KeePass.Forms + m_pluginManager.Initialize(m_pluginDefaultHost); + + m_pluginManager.UnloadAllPlugins(); +- if(AppPolicy.Current.Plugins) m_pluginManager.LoadAllPlugins(); +$DO_LOADS$+ + + // Delete old files *after* loading plugins (when timestamps + // of loaded plugins have been updated already) diff --git a/pkgs/applications/misc/kiwix/default.nix b/pkgs/applications/misc/kiwix/default.nix index 8479c4e16ace..699cb2fd0986 100644 --- a/pkgs/applications/misc/kiwix/default.nix +++ b/pkgs/applications/misc/kiwix/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, makeWrapper, pkgconfig , zip, python, zlib, which, icu, libmicrohttpd, lzma, aria2, wget, bc -, libuuid, glibc, libX11, libXext, libXt, libXrender, glib, dbus, dbus_glib +, libuuid, glibc, libX11, libXext, libXt, libXrender, glib, dbus, dbus-glib , gtk2, gdk_pixbuf, pango, cairo, freetype, fontconfig, alsaLib, atk, cmake , xapian, ctpp2, zimlib }: @@ -93,7 +93,7 @@ stdenv.mkDerivation rec { rm $out/bin/kiwix makeWrapper $out/lib/kiwix/kiwix-launcher $out/bin/kiwix \ - --suffix LD_LIBRARY_PATH : ${makeLibraryPath [stdenv.cc.cc libX11 libXext libXt libXrender glib dbus dbus_glib gtk2 gdk_pixbuf pango cairo freetype fontconfig alsaLib atk]} \ + --suffix LD_LIBRARY_PATH : ${makeLibraryPath [stdenv.cc.cc libX11 libXext libXt libXrender glib dbus dbus-glib gtk2 gdk_pixbuf pango cairo freetype fontconfig alsaLib atk]} \ --suffix PATH : ${aria2}/bin ''; diff --git a/pkgs/applications/misc/kupfer/default.nix b/pkgs/applications/misc/kupfer/default.nix index e2290105c925..bb55fc2d4a8b 100644 --- a/pkgs/applications/misc/kupfer/default.nix +++ b/pkgs/applications/misc/kupfer/default.nix @@ -8,7 +8,7 @@ , dbus , libwnck3 , keybinder3 -, hicolor_icon_theme +, hicolor-icon-theme , wrapGAppsHook }: @@ -28,7 +28,7 @@ buildPythonApplication rec { # For setup hook gobjectIntrospection ]; - buildInputs = [ hicolor_icon_theme docutils libwnck3 keybinder3 ]; + buildInputs = [ hicolor-icon-theme docutils libwnck3 keybinder3 ]; propagatedBuildInputs = [ pygobject3 gtk3 pyxdg dbus-python pycairo ]; configurePhase = '' diff --git a/pkgs/applications/misc/latte-dock/default.nix b/pkgs/applications/misc/latte-dock/default.nix index 2695ac1ef7d5..5c21b404f348 100644 --- a/pkgs/applications/misc/latte-dock/default.nix +++ b/pkgs/applications/misc/latte-dock/default.nix @@ -1,7 +1,7 @@ { mkDerivation, lib, cmake, xorg, plasma-framework, fetchFromGitHub , extra-cmake-modules, karchive, kwindowsystem, qtx11extras, kcrash }: -let version = "0.7.1"; in +let version = "0.7.3"; in mkDerivation { name = "latte-dock-${version}"; @@ -10,7 +10,7 @@ mkDerivation { owner = "psifidotos"; repo = "Latte-Dock"; rev = "v${version}"; - sha256 = "0vdmsjj1qqlzz26mznb56znv5x7akbvw65ybbzakclp4q1xrsrm2"; + sha256 = "110bal0dairsvgj624n5k0zabh2qfy9dk560a4wy7icxv0cjh7hg"; }; buildInputs = [ plasma-framework xorg.libpthreadstubs xorg.libXdmcp xorg.libSM ]; diff --git a/pkgs/applications/misc/lxterminal/default.nix b/pkgs/applications/misc/lxterminal/default.nix index a514b0ff63dd..0a2a051223ac 100644 --- a/pkgs/applications/misc/lxterminal/default.nix +++ b/pkgs/applications/misc/lxterminal/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, automake, autoconf, intltool, pkgconfig, gtk2, vte +{ stdenv, fetchurl, automake, autoconf, intltool, pkgconfig, gtk3, vte , libxslt, docbook_xml_dtd_412, docbook_xml_xslt, libxml2, findXMLCatalogs }: @@ -14,6 +14,7 @@ stdenv.mkDerivation rec { configureFlags = [ "--enable-man" + "--enable-gtk3" ]; nativeBuildInputs = [ @@ -21,7 +22,7 @@ stdenv.mkDerivation rec { libxslt docbook_xml_dtd_412 docbook_xml_xslt libxml2 findXMLCatalogs ]; - buildInputs = [ gtk2 vte ]; + buildInputs = [ gtk3 vte ]; patches = [ ./respect-xml-catalog-files-var.patch diff --git a/pkgs/applications/misc/mediainfo-gui/default.nix b/pkgs/applications/misc/mediainfo-gui/default.nix index 0167132db789..8451c783aac6 100644 --- a/pkgs/applications/misc/mediainfo-gui/default.nix +++ b/pkgs/applications/misc/mediainfo-gui/default.nix @@ -1,16 +1,16 @@ { stdenv, fetchurl, autoreconfHook, pkgconfig, libzen, libmediainfo, wxGTK -, desktop_file_utils, libSM, imagemagick }: +, desktop-file-utils, libSM, imagemagick }: stdenv.mkDerivation rec { - version = "17.10"; + version = "17.12"; name = "mediainfo-gui-${version}"; src = fetchurl { url = "https://mediaarea.net/download/source/mediainfo/${version}/mediainfo_${version}.tar.xz"; - sha256 = "1yvh4r19kk3bzzgnr4ikrjxqldr6860s35sh4bqr51c7l77k048c"; + sha256 = "1pxdf0ny3c38gl513zdiaagpvk4bqnsc2fn7476yjdpv2lxsw56f"; }; nativeBuildInputs = [ autoreconfHook pkgconfig ]; - buildInputs = [ libzen libmediainfo wxGTK desktop_file_utils libSM + buildInputs = [ libzen libmediainfo wxGTK desktop-file-utils libSM imagemagick ]; sourceRoot = "./MediaInfo/Project/GNU/GUI/"; diff --git a/pkgs/applications/misc/mlterm/default.nix b/pkgs/applications/misc/mlterm/default.nix index 1317c0357923..701e4b2e052d 100644 --- a/pkgs/applications/misc/mlterm/default.nix +++ b/pkgs/applications/misc/mlterm/default.nix @@ -7,11 +7,11 @@ stdenv.mkDerivation rec { name = "mlterm-${version}"; - version = "3.8.0"; + version = "3.8.4"; src = fetchurl { url = "mirror://sourceforge/project/mlterm/01release/${name}/${name}.tar.gz"; - sha256 = "00dzx5rqsp73shgvn2jvgk85v3lirby06wxkqjcm1i1xwigidq3b"; + sha256 = "07ih7953pr1jr99rayjn57ba5a0cr3niqkmvy9n59lcc1qwcrwf9"; }; nativeBuildInputs = [ pkgconfig autoconf ]; diff --git a/pkgs/applications/misc/mupdf/default.nix b/pkgs/applications/misc/mupdf/default.nix index 75d8463cf7f8..5326f948d894 100644 --- a/pkgs/applications/misc/mupdf/default.nix +++ b/pkgs/applications/misc/mupdf/default.nix @@ -29,6 +29,16 @@ in stdenv.mkDerivation rec { url = "https://git.archlinux.org/svntogit/community.git/plain/trunk/0001-mupdf-openjpeg.patch?h=packages/mupdf&id=a910cd33a2b311712f83710dc042fbe80c104306"; sha256 = "05i9v2ia586jyjqdb7g68ss4vkfwgp6cwhagc8zzggsba83azyqk"; }) + (fetchpatch { + name = "CVE-2018-6544.1.patch"; + url = "http://git.ghostscript.com/?p=mupdf.git;a=commitdiff_plain;h=b03def134988da8c800adac1a38a41a1f09a1d89;hp=26527eef77b3e51c2258c8e40845bfbc015e405d"; + sha256 = "1rlmjibl73ls8xfpsz69axa3lw5l47vb0a1dsjqziszsld4lpj5i"; + }) + (fetchpatch { + name = "CVE-2018-6544.2.patch"; + url = "http://git.ghostscript.com/?p=mupdf.git;a=patch;h=26527eef77b3e51c2258c8e40845bfbc015e405d;hp=ab98356f959c7a6e94b1ec10f78dd2c33ed3f3e7"; + sha256 = "1brcc029s5zmd6ya0d9qk3mh9qwx5g6vhsf1j8h879092sya5627"; + }) ] # Use shared libraries to decrease size diff --git a/pkgs/applications/misc/mysql-workbench/default.nix b/pkgs/applications/misc/mysql-workbench/default.nix index e8c6c9f24300..76517f874642 100644 --- a/pkgs/applications/misc/mysql-workbench/default.nix +++ b/pkgs/applications/misc/mysql-workbench/default.nix @@ -1,8 +1,8 @@ { stdenv, fetchurl, makeWrapper, cmake, pkgconfig -, glibc, gnome_keyring, gtk, gtkmm, pcre, swig, sudo +, glibc, gnome-keyring, gtk, gtkmm, pcre, swig, sudo , mysql, libxml2, libctemplate, libmysqlconnectorcpp , vsqlite, tinyxml, gdal, libiodbc, libpthreadstubs -, libXdmcp, libuuid, libzip, libgnome_keyring, file +, libXdmcp, libuuid, libzip, libgnome-keyring, file , pythonPackages, jre, autoconf, automake, libtool , boost, glibmm, libsigcxx, pangomm, libX11, openssl , proj, cairo, libglade @@ -21,9 +21,9 @@ in stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ cmake gnome_keyring gtk gtk.dev gtkmm pcre swig python sudo + buildInputs = [ cmake gnome-keyring gtk gtk.dev gtkmm pcre swig python sudo paramiko mysql libxml2 libctemplate libmysqlconnectorcpp vsqlite tinyxml gdal libiodbc file - libpthreadstubs libXdmcp libuuid libzip libgnome_keyring libgnome_keyring.dev jre autoconf + libpthreadstubs libXdmcp libuuid libzip libgnome-keyring libgnome-keyring.dev jre autoconf automake libtool boost glibmm glibmm.dev libsigcxx pangomm libX11 pexpect pycrypto openssl proj cairo cairo.dev makeWrapper libglade ] ; @@ -82,7 +82,7 @@ in stdenv.mkDerivation rec { wrapProgram "$out/bin/mysql-workbench" \ --prefix LD_LIBRARY_PATH : "${python}/lib" \ --prefix LD_LIBRARY_PATH : "$(cat ${stdenv.cc}/nix-support/orig-cc)/lib64" \ - --prefix PATH : "${gnome_keyring}/bin" \ + --prefix PATH : "${gnome-keyring}/bin" \ --prefix PATH : "${python}/bin" \ --set PYTHONPATH $PYTHONPATH \ --run ' diff --git a/pkgs/applications/misc/nixnote2/default.nix b/pkgs/applications/misc/nixnote2/default.nix new file mode 100644 index 000000000000..971da8ba0483 --- /dev/null +++ b/pkgs/applications/misc/nixnote2/default.nix @@ -0,0 +1,37 @@ +{ stdenv, mkDerivation, fetchFromGitHub, boost, qtbase, qtwebkit, poppler_qt5, qmake, hunspell, html-tidy}: + +mkDerivation rec { + name = "nixnote2-${version}"; + version = "2.0.2"; + + src = fetchFromGitHub { + owner = "baumgarr"; + repo = "nixnote2"; + rev = "v${version}"; + sha256 = "0cfq95mxvcgby66r61gclm1a2c6zck5aln04xmg2q8kg6p9d31fr"; + }; + + buildInputs = [ boost qtbase qtwebkit poppler_qt5 hunspell ]; + + enableParallelBuilding = true; + + nativeBuildInputs = [ qmake ]; + + postPatch = '' + # Fix location of poppler-qt5.h + for f in threads/indexrunner.cpp html/noteformatter.cpp utilities/noteindexer.cpp gui/plugins/popplerviewer.h gui/plugins/pluginfactory.h gui/plugins/popplerviewer.cpp ; do + substituteInPlace $f \ + --replace '#include ' '#include ' + done + + substituteInPlace nixnote.cpp --replace 'tidyProcess.start("tidy' 'tidyProcess.start("${html-tidy}/bin/tidy' + ''; + + meta = with stdenv.lib; { + description = "An unofficial client of Evernote"; + homepage = http://www.nixnote.org/; + license = licenses.gpl2Plus; + maintainers = with maintainers; [ htr ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/applications/misc/notify-osd/default.nix b/pkgs/applications/misc/notify-osd/default.nix index 2aa04ce83e53..8e8126192dda 100644 --- a/pkgs/applications/misc/notify-osd/default.nix +++ b/pkgs/applications/misc/notify-osd/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, glib, libwnck3, libnotify, dbus_glib, makeWrapper, gnome3 }: +{ stdenv, fetchurl, pkgconfig, glib, libwnck3, libnotify, dbus-glib, makeWrapper, gnome3 }: stdenv.mkDerivation rec { name = "notify-osd-${version}"; @@ -11,8 +11,8 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig ]; buildInputs = [ - glib libwnck3 libnotify dbus_glib makeWrapper - gnome3.gsettings_desktop_schemas + glib libwnck3 libnotify dbus-glib makeWrapper + gnome3.gsettings-desktop-schemas ]; configureFlags = "--libexecdir=$(out)/bin"; diff --git a/pkgs/applications/misc/nrsc5/default.nix b/pkgs/applications/misc/nrsc5/default.nix index f1211851b4c6..69f74d66dd01 100644 --- a/pkgs/applications/misc/nrsc5/default.nix +++ b/pkgs/applications/misc/nrsc5/default.nix @@ -10,14 +10,16 @@ let sha256 = "0pcw2x9rjgkf5g6irql1j4m5xjb4lxj6468z8v603921bnir71mf"; }; + version = "1.0"; + in stdenv.mkDerivation { - name = "nrsc5-20171129"; + name = "nrsc5-${version}"; src = fetchFromGitHub { owner = "theori-io"; repo = "nrsc5"; - rev = "f87beeed96f12ce6aa4789ac1d45761cec28d2db"; - sha256 = "03d5k59125qrjsm1naj9pd0nfzwi008l9n30p9q4g5abgqi5nc8v"; + rev = "v${version}"; + sha256 = "09zzh3h1zzf2lwrbz3i7rif2hw36d9ska8irvxaa9lz6xc1y68pg"; }; postUnpack = '' diff --git a/pkgs/applications/misc/ola/default.nix b/pkgs/applications/misc/ola/default.nix index 499653b14359..9e460bf2611a 100644 --- a/pkgs/applications/misc/ola/default.nix +++ b/pkgs/applications/misc/ola/default.nix @@ -5,13 +5,13 @@ stdenv.mkDerivation rec { name = "ola-${version}"; - version = "0.10.5"; + version = "0.10.6"; src = fetchFromGitHub { owner = "OpenLightingProject"; repo = "ola"; rev = version; - sha256 = "1296iiq8fxbvv8sghpj3nambfmixps48dd77af0gpwf7hmjjm8al"; + sha256 = "1qazhkcakvzkf1dvav0alk33aaklawf8vckgwpf6fvwf7g2kyh63"; }; nativeBuildInputs = [ autoreconfHook bison flex pkgconfig perl ]; diff --git a/pkgs/applications/misc/onboard/default.nix b/pkgs/applications/misc/onboard/default.nix index a78b98a58cb3..d4847e4ce493 100644 --- a/pkgs/applications/misc/onboard/default.nix +++ b/pkgs/applications/misc/onboard/default.nix @@ -1,21 +1,21 @@ { fetchurl , stdenv , aspellWithDicts -, at_spi2_core ? null +, at-spi2-core ? null , atspiSupport ? true , bash , glib , glibcLocales , gnome3 , gobjectIntrospection -, gsettings_desktop_schemas +, gsettings-desktop-schemas , gtk3 , hunspell , hunspellDicts , hunspellWithDicts , intltool , isocodes -, libcanberra_gtk3 +, libcanberra-gtk3 , libudev , libxkbcommon , pkgconfig @@ -74,17 +74,17 @@ in python3.pkgs.buildPythonApplication rec { buildInputs = [ bash gnome3.dconf - gsettings_desktop_schemas + gsettings-desktop-schemas gtk3 hunspell isocodes - libcanberra_gtk3 + libcanberra-gtk3 libudev libxkbcommon wrapGAppsHook xorg.libXtst xorg.libxkbfile - ] ++ stdenv.lib.optional atspiSupport at_spi2_core; + ] ++ stdenv.lib.optional atspiSupport at-spi2-core; nativeBuildInputs = [ glibcLocales diff --git a/pkgs/applications/misc/orca/default.nix b/pkgs/applications/misc/orca/default.nix index fc7fd95bbb95..0c0de526e601 100644 --- a/pkgs/applications/misc/orca/default.nix +++ b/pkgs/applications/misc/orca/default.nix @@ -1,9 +1,9 @@ { stdenv, lib, pkgconfig, fetchurl, buildPythonApplication , autoreconfHook, wrapGAppsHook -, intltool, yelp_tools, itstool, libxmlxx3 +, intltool, yelp-tools, itstool, libxmlxx3 , python, pygobject3, gtk3, gnome3, substituteAll -, at_spi2_atk, at_spi2_core, pyatspi, dbus, dbus-python, pyxdg -, xkbcomp, gsettings_desktop_schemas, liblouis +, at-spi2-atk, at-spi2-core, pyatspi, dbus, dbus-python, pyxdg +, xkbcomp, gsettings-desktop-schemas, liblouis , speechd, brltty, setproctitle, gst_all_1, gst-python }: @@ -30,7 +30,7 @@ in buildPythonApplication rec { nativeBuildInputs = [ autoreconfHook wrapGAppsHook pkgconfig libxmlxx3 - intltool yelp_tools itstool + intltool yelp-tools itstool ]; propagatedBuildInputs = [ @@ -38,7 +38,7 @@ in buildPythonApplication rec { ]; buildInputs = [ - python gtk3 at_spi2_atk at_spi2_core dbus gsettings_desktop_schemas + python gtk3 at-spi2-atk at-spi2-core dbus gsettings-desktop-schemas gst_all_1.gstreamer gst_all_1.gst-plugins-base gst_all_1.gst-plugins-good ]; diff --git a/pkgs/applications/misc/pdfmod/default.nix b/pkgs/applications/misc/pdfmod/default.nix index 691f3188b08c..47be9dc8200e 100644 --- a/pkgs/applications/misc/pdfmod/default.nix +++ b/pkgs/applications/misc/pdfmod/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, fetchpatch, pkgconfig, gnome_doc_utils, intltool, lib +{ stdenv, fetchurl, fetchpatch, pkgconfig, gnome-doc-utils, intltool, lib , mono, gtk-sharp-2_0, gnome-sharp, hyena , which, makeWrapper, glib, gnome3, poppler, wrapGAppsHook }: @@ -20,7 +20,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig ]; buildInputs = [ - gnome_doc_utils intltool mono gtk-sharp-2_0 gnome-sharp + gnome-doc-utils intltool mono gtk-sharp-2_0 gnome-sharp hyena which makeWrapper wrapGAppsHook ]; diff --git a/pkgs/applications/misc/pdfshuffler/default.nix b/pkgs/applications/misc/pdfshuffler/default.nix index e01956e36119..e06f4407534b 100644 --- a/pkgs/applications/misc/pdfshuffler/default.nix +++ b/pkgs/applications/misc/pdfshuffler/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchsvn , wrapGAppsHook, makeWrapper, gettext , python3Packages, gtk3, poppler_gi -, gnome3, gsettings_desktop_schemas, shared_mime_info, +, gnome3, gsettings-desktop-schemas, shared-mime-info, }: python3Packages.buildPythonApplication rec { @@ -16,7 +16,7 @@ python3Packages.buildPythonApplication rec { nativeBuildInputs = [ wrapGAppsHook gettext makeWrapper ]; buildInputs = [ - gtk3 gsettings_desktop_schemas poppler_gi gnome3.adwaita-icon-theme + gtk3 gsettings-desktop-schemas poppler_gi gnome3.adwaita-icon-theme ]; propagatedBuildInputs = with python3Packages; [ @@ -26,7 +26,7 @@ python3Packages.buildPythonApplication rec { ]; preFixup = '' - gappsWrapperArgs+=(--prefix XDG_DATA_DIRS : "${shared_mime_info}/share") + gappsWrapperArgs+=(--prefix XDG_DATA_DIRS : "${shared-mime-info}/share") ''; doCheck = false; # no tests diff --git a/pkgs/applications/misc/perkeep/default.nix b/pkgs/applications/misc/perkeep/default.nix index 3b64cf4aa6c0..746a319c2e1e 100644 --- a/pkgs/applications/misc/perkeep/default.nix +++ b/pkgs/applications/misc/perkeep/default.nix @@ -1,5 +1,29 @@ -{ stdenv, lib, go_1_8, fetchzip, git }: +{ stdenv, lib, go, fetchzip, git, fetchpatch, fetchFromGitHub, fetchgit }: +# When perkeep is updated all deps in the let block should be removed +let + gopherjs = fetchFromGitHub { + owner = "gopherjs"; + repo = "gopherjs"; + # Rev matching https://github.com/perkeep/perkeep/commit/2e46fca5cc1179dbd90bec49fec3870e6eca6c45 + rev = "b40cd48c38f9a18eb3db20d163bad78de12cf0b7"; + sha256 = "0kniz8dg5bymb03qriizza1h3gpymf97vsgq9vd222282pdj0vyc"; + }; + + gotool = fetchFromGitHub { + owner = "kisielk"; + repo = "gotool"; + rev = "80517062f582ea3340cd4baf70e86d539ae7d84d"; + sha256 = "14af2pa0ssyp8bp2mvdw184s5wcysk6akil3wzxmr05wwy951iwn"; + }; + + gcimporter15 = fetchgit { + url = "https://go.googlesource.com/tools"; + rev = "f8f2f88271bf2c23f28a09d288d26507a9503c97"; + sha256 = "1pchwizx1sdli59g8r0p4djfjkchcvh8msfpp3ibvz3xl250jh0n"; + }; + +in stdenv.mkDerivation rec { name = "perkeep-${version}"; version = "20170505"; @@ -9,7 +33,24 @@ stdenv.mkDerivation rec { sha256 = "1vliyvkyzmhdi6knbh8rdsswmz3h0rpxdpq037jwbdbkjccxjdwa"; }; - buildInputs = [ git go_1_8 ]; + # When perkeep is updated postPatch should be removed + postPatch = '' + rm -r ./vendor/github.com/gopherjs/gopherjs/ + cp -a ${gopherjs} ./vendor/github.com/gopherjs/gopherjs + mkdir -p ./vendor/github.com/kisielk/ + cp -a ${gotool} ./vendor/github.com/kisielk/gotool + mkdir -p ./vendor/golang.org/x/tools/go + cp -a ${gcimporter15}/go/gcimporter15 ./vendor/golang.org/x/tools/go/gcimporter15 + + substituteInPlace vendor/github.com/gopherjs/gopherjs/build/build.go \ + --replace '"github.com/fsnotify/fsnotify"' 'fsnotify "camlistore.org/pkg/misc/fakefsnotify"' + + substituteInPlace ./make.go \ + --replace "goVersionMinor = '8'" "goVersionMinor = '9'" \ + --replace "gopherJSGoMinor = '8'" "gopherJSGoMinor = '9'" + ''; + + buildInputs = [ git go ]; goPackagePath = ""; buildPhase = '' diff --git a/pkgs/applications/misc/pytrainer/default.nix b/pkgs/applications/misc/pytrainer/default.nix index ecc4c341a686..5b4b043ef667 100644 --- a/pkgs/applications/misc/pytrainer/default.nix +++ b/pkgs/applications/misc/pytrainer/default.nix @@ -14,13 +14,13 @@ in python2Packages.buildPythonApplication rec { name = "pytrainer-${version}"; - version = "1.11.0"; + version = "1.12.0"; src = fetchFromGitHub { owner = "pytrainer"; repo = "pytrainer"; rev = "v${version}"; - sha256 = "1x4f1ydjql0aisvxs5kyi9lx35b4q3768dx42fyzq1nxdwzaqyvy"; + sha256 = "09pfddjaqdpy3r27h21xvsvh04sb8hppinskxlahdqb3vjzkr581"; }; namePrefix = ""; @@ -35,8 +35,13 @@ python2Packages.buildPythonApplication rec { ./pytrainer-webkit.patch ]; + postPatch = '' + substituteInPlace ./setup.py \ + --replace "'mysqlclient'," "" + ''; + propagatedBuildInputs = with python2Packages; [ - dateutil lxml matplotlibGtk pyGtkGlade sqlalchemy_migrate + dateutil lxml matplotlibGtk pyGtkGlade sqlalchemy sqlalchemy_migrate psycopg2 ] ++ stdenv.lib.optional withWebKit [ pywebkitgtk ]; buildInputs = [ perl gpsbabel sqlite ]; diff --git a/pkgs/applications/misc/pytrainer/fix-test-tz.patch b/pkgs/applications/misc/pytrainer/fix-test-tz.patch index 359e28c41c34..761064077a98 100644 --- a/pkgs/applications/misc/pytrainer/fix-test-tz.patch +++ b/pkgs/applications/misc/pytrainer/fix-test-tz.patch @@ -1,7 +1,7 @@ -diff -Nurp pytrainer-v1.11.0-a/pytrainer/test/core/test_activity.py pytrainer-v1.11.0-b/pytrainer/test/core/test_activity.py ---- pytrainer-v1.11.0-a/pytrainer/test/core/test_activity.py 1980-01-02 00:00:00.000000000 +0100 -+++ pytrainer-v1.11.0-b/pytrainer/test/core/test_activity.py 2017-09-30 18:56:43.127016847 +0200 -@@ -69,7 +69,7 @@ class ActivityTest(unittest.TestCase): +diff -Nurp source.orig/pytrainer/test/core/test_activity.py source/pytrainer/test/core/test_activity.py +--- source.orig/pytrainer/test/core/test_activity.py 2018-02-27 22:15:32.078243354 +0100 ++++ source/pytrainer/test/core/test_activity.py 2018-02-27 22:16:33.936867052 +0100 +@@ -92,7 +92,7 @@ class ActivityTest(unittest.TestCase): self.assertEquals(self.activity.time, self.activity.duration) def test_activity_starttime(self): @@ -10,10 +10,10 @@ diff -Nurp pytrainer-v1.11.0-a/pytrainer/test/core/test_activity.py pytrainer-v1 def test_activity_time_tuple(self): self.assertEquals(self.activity.time_tuple, (2, 3, 46)) -diff -Nurp pytrainer-v1.11.0-a/pytrainer/test/imports/test_garmintcxv2.py pytrainer-v1.11.0-b/pytrainer/test/imports/test_garmintcxv2.py ---- pytrainer-v1.11.0-a/pytrainer/test/imports/test_garmintcxv2.py 1980-01-02 00:00:00.000000000 +0100 -+++ pytrainer-v1.11.0-b/pytrainer/test/imports/test_garmintcxv2.py 2017-09-30 18:55:45.078128980 +0200 -@@ -23,7 +23,7 @@ class GarminTCXv2Test(unittest.TestCase) +diff -Nurp source.orig/pytrainer/test/imports/test_garmintcxv2.py source/pytrainer/test/imports/test_garmintcxv2.py +--- source.orig/pytrainer/test/imports/test_garmintcxv2.py 2018-02-27 22:15:32.079243364 +0100 ++++ source/pytrainer/test/imports/test_garmintcxv2.py 2018-02-27 22:17:10.778333751 +0100 +@@ -39,7 +39,7 @@ class GarminTCXv2Test(unittest.TestCase) self.fail() def test_workout_summary(self): @@ -22,9 +22,18 @@ diff -Nurp pytrainer-v1.11.0-a/pytrainer/test/imports/test_garmintcxv2.py pytrai try: current_path = os.path.dirname(os.path.abspath(__file__)) data_path = os.path.dirname(os.path.dirname(os.path.dirname(current_path))) + "/" -diff -Nurp pytrainer-v1.11.0-a/pytrainer/test/lib/test_date.py pytrainer-v1.11.0-b/pytrainer/test/lib/test_date.py ---- pytrainer-v1.11.0-a/pytrainer/test/lib/test_date.py 1980-01-02 00:00:00.000000000 +0100 -+++ pytrainer-v1.11.0-b/pytrainer/test/lib/test_date.py 2017-09-30 18:56:23.448720166 +0200 +@@ -52,7 +52,7 @@ class GarminTCXv2Test(unittest.TestCase) + self.fail() + + def test_summary_in_database(self): +- summary = [(0, True, '2012-10-14T12:02:42', '10.12', '00:39:51', 'Running')] ++ summary = [(0, True, '2012-10-14T10:02:42', '10.12', '00:39:51', 'Running')] + activity = Activity(date_time_utc='2012-10-14T10:02:42Z', sport_id='1') + self.ddbb.session.add(activity) + self.ddbb.session.commit() +diff -Nurp source.orig/pytrainer/test/lib/test_date.py source/pytrainer/test/lib/test_date.py +--- source.orig/pytrainer/test/lib/test_date.py 2018-02-27 22:15:32.079243364 +0100 ++++ source/pytrainer/test/lib/test_date.py 2018-02-27 22:16:33.936867052 +0100 @@ -45,4 +45,4 @@ class DateFunctionTest(unittest.TestCase def test_getDateTime(self): utctime, localtime = getDateTime('Tue Nov 24 17:29:05 UTC 2015') diff --git a/pkgs/applications/misc/qsyncthingtray/default.nix b/pkgs/applications/misc/qsyncthingtray/default.nix index 763435da564d..88628c63c9ce 100644 --- a/pkgs/applications/misc/qsyncthingtray/default.nix +++ b/pkgs/applications/misc/qsyncthingtray/default.nix @@ -1,7 +1,7 @@ { mkDerivation, stdenv, lib, fetchFromGitHub, fetchpatch, procps ? null , qtbase, qtwebengine, qtwebkit , cmake -, syncthing, syncthing-inotify ? null +, syncthing , preferQWebView ? false , preferNative ? true }: @@ -34,7 +34,6 @@ mkDerivation rec { ${lib.optionalString stdenv.isLinux '' substituteInPlace includes/platforms/linux/posixUtils.hpp \ --replace '"/usr/local/bin/syncthing"' '"${syncthing}/bin/syncthing"' \ - --replace '"/usr/local/bin/syncthing-inotify"' '"${syncthing-inotify}/bin/syncthing-inotify"' \ --replace '"pgrep -x' '"${procps}/bin/pgrep -x' ''} diff --git a/pkgs/applications/misc/ranger/default.nix b/pkgs/applications/misc/ranger/default.nix index 6ac27f145a93..b13bc4cb7af2 100644 --- a/pkgs/applications/misc/ranger/default.nix +++ b/pkgs/applications/misc/ranger/default.nix @@ -7,13 +7,13 @@ assert imagePreviewSupport -> w3m != null; pythonPackages.buildPythonApplication rec { name = "ranger-${version}"; - version = "1.9.0"; + version = "1.9.1"; src = fetchFromGitHub { owner = "ranger"; repo = "ranger"; rev = "v${version}"; - sha256= "0h3qz0sr21390xdshhlfisvscja33slv1plzcisg1wrdgwgyr5j6"; + sha256= "1zhds37j1scxa9b183qbrjwxqldrdk581c5xiy81vg17sndb1kqj"; }; checkInputs = with pythonPackages; [ pytest ]; diff --git a/pkgs/applications/misc/redshift/default.nix b/pkgs/applications/misc/redshift/default.nix index c0e481ae8788..b7ab092bbc04 100644 --- a/pkgs/applications/misc/redshift/default.nix +++ b/pkgs/applications/misc/redshift/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchFromGitHub, fetchurl, autoconf, automake, gettext, intltool , libtool, pkgconfig, wrapGAppsHook, wrapPython, geoclue2, gobjectIntrospection -, gtk3, python, pygobject3, pyxdg, libdrm, libxcb }: +, gtk3, python, pygobject3, pyxdg, libdrm, libxcb, hicolor-icon-theme }: stdenv.mkDerivation rec { name = "redshift-${version}"; @@ -36,15 +36,14 @@ stdenv.mkDerivation rec { libdrm libxcb python + hicolor-icon-theme ]; pythonPath = [ pygobject3 pyxdg ]; preConfigure = "./bootstrap"; - postFixup = '' - wrapPythonPrograms - rm "$out/share/icons/hicolor/icon-theme.cache" - ''; + + postFixup = "wrapPythonPrograms"; enableParallelBuilding = true; diff --git a/pkgs/applications/misc/regextester/default.nix b/pkgs/applications/misc/regextester/default.nix new file mode 100644 index 000000000000..c1b1cfb48a28 --- /dev/null +++ b/pkgs/applications/misc/regextester/default.nix @@ -0,0 +1,54 @@ +{ stdenv +, fetchFromGitHub +, gettext +, libxml2 +, pkgconfig +, gtk3 +, granite +, gnome3 +, cmake +, ninja +, vala +, elementary-cmake-modules +, wrapGAppsHook }: + +stdenv.mkDerivation rec { + name = "regextester-${version}"; + version = "0.1.7"; + + src = fetchFromGitHub { + owner = "artemanufrij"; + repo = "regextester"; + rev = version; + sha256 = "07shdm10dc7jz2hka5dc51yp81a0dgc47nmkrp6fs6r9wqx0j30n"; + }; + + XDG_DATA_DIRS = stdenv.lib.concatStringsSep ":" [ + "${granite}/share" + "${gnome3.libgee}/share" + ]; + + nativeBuildInputs = [ + pkgconfig + wrapGAppsHook + vala + cmake + ninja + gettext + libxml2 + elementary-cmake-modules + ]; + buildInputs = [ + gtk3 + granite + gnome3.libgee + ]; + + meta = with stdenv.lib; { + description = "A desktop application to test regular expressions interactively"; + homepage = https://github.com/artemanufrij/regextester; + maintainers = with maintainers; [ samdroid-apps ]; + platforms = platforms.linux; + license = licenses.gpl2Plus; + }; +} diff --git a/pkgs/applications/misc/roxterm/default.nix b/pkgs/applications/misc/roxterm/default.nix index cbf602b75dab..1d0c7d28de6e 100644 --- a/pkgs/applications/misc/roxterm/default.nix +++ b/pkgs/applications/misc/roxterm/default.nix @@ -1,5 +1,5 @@ -{ stdenv, fetchurl, docbook_xsl, dbus_libs, dbus_glib, expat, gettext -, gsettings_desktop_schemas, gdk_pixbuf, gtk2, gtk3, hicolor_icon_theme +{ stdenv, fetchurl, docbook_xsl, dbus_libs, dbus-glib, expat, gettext +, gsettings-desktop-schemas, gdk_pixbuf, gtk2, gtk3, hicolor-icon-theme , imagemagick, itstool, librsvg, libtool, libxslt, lockfile, makeWrapper , pkgconfig, python, pythonPackages, vte , wrapGAppsHook}: @@ -22,11 +22,11 @@ in stdenv.mkDerivation rec { buildInputs = [ docbook_xsl expat imagemagick itstool librsvg libtool libxslt - makeWrapper python pythonPackages.lockfile dbus_libs dbus_glib - gdk_pixbuf gsettings_desktop_schemas gtk3 - hicolor_icon_theme vte ]; + makeWrapper python pythonPackages.lockfile dbus_libs dbus-glib + gdk_pixbuf gsettings-desktop-schemas gtk3 + hicolor-icon-theme vte ]; - NIX_CFLAGS_COMPILE = [ "-I${dbus_glib.dev}/include/dbus-1.0" + NIX_CFLAGS_COMPILE = [ "-I${dbus-glib.dev}/include/dbus-1.0" "-I${dbus_libs.dev}/include/dbus-1.0" "-I${dbus_libs.lib}/lib/dbus-1.0/include" ]; diff --git a/pkgs/applications/misc/sakura/default.nix b/pkgs/applications/misc/sakura/default.nix index 17798bb01e2d..7c74bb6cd459 100644 --- a/pkgs/applications/misc/sakura/default.nix +++ b/pkgs/applications/misc/sakura/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "sakura-${version}"; - version = "3.4.0"; + version = "3.5.0"; src = fetchurl { url = "http://launchpad.net/sakura/trunk/${version}/+download/${name}.tar.bz2"; - sha256 = "1vj07xnkalb8q6ippf4bmv5cf4266p1j9m80sxb6hncx0h8paj04"; + sha256 = "0fhcn3540iw22l5zg3njh5z8cj0g2n9p6fvagjqa5zc323jfsc7b"; }; nativeBuildInputs = [ cmake perl pkgconfig ]; diff --git a/pkgs/applications/misc/sequeler/default.nix b/pkgs/applications/misc/sequeler/default.nix new file mode 100644 index 000000000000..2c8753efcd74 --- /dev/null +++ b/pkgs/applications/misc/sequeler/default.nix @@ -0,0 +1,40 @@ +{ stdenv, fetchFromGitHub +, cmake, ninja, pkgconfig, vala, gobjectIntrospection, gettext, wrapGAppsHook +, gtk3, glib, granite, libgee, libgda, gtksourceview, libxml2 }: + + +let + version = "0.5.4"; + sqlGda = libgda.override { + mysqlSupport = true; + postgresSupport = true; + }; + +in stdenv.mkDerivation rec { + name = "sequeler-${version}"; + + src = fetchFromGitHub { + owner = "Alecaddd"; + repo = "sequeler"; + rev = "v${version}"; + sha256 = "05c7y6xdyq3h9bn90pbz03jhy9kabmgpxi4zz0i26q0qphljskbx"; + }; + + nativeBuildInputs = [ cmake ninja pkgconfig vala gobjectIntrospection gettext wrapGAppsHook ]; + + buildInputs = [ gtk3 glib granite libgee sqlGda gtksourceview libxml2 ]; + + meta = with stdenv.lib; { + description = "Friendly SQL Client"; + longDescription = '' + Sequeler is a native Linux SQL client built in Vala and Gtk. It allows you + to connect to your local and remote databases, write SQL in a handy text + editor with language recognition, and visualize SELECT results in a + Gtk.Grid Widget. + ''; + homepage = https://github.com/Alecaddd/sequeler; + license = licenses.gpl3; + maintainers = [ maintainers.etu ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/applications/misc/simplenote/default.nix b/pkgs/applications/misc/simplenote/default.nix index 7367c8207054..7fbf11573c49 100644 --- a/pkgs/applications/misc/simplenote/default.nix +++ b/pkgs/applications/misc/simplenote/default.nix @@ -1,5 +1,5 @@ { fetchurl, stdenv, lib, zlib, glib, alsaLib, dbus, gtk2, atk, pango, freetype, fontconfig -, libgnome_keyring3, gdk_pixbuf, gvfs, cairo, cups, expat, libgpgerror, nspr +, libgnome-keyring3, gdk_pixbuf, gvfs, cairo, cups, expat, libgpgerror, nspr , nss, xorg, libcap, systemd, libnotify ,libXScrnSaver, gnome3 }: stdenv.mkDerivation rec { @@ -15,7 +15,7 @@ buildCommand = let packages = [ - stdenv.cc.cc zlib glib dbus gtk2 atk pango freetype libgnome_keyring3 + stdenv.cc.cc zlib glib dbus gtk2 atk pango freetype libgnome-keyring3 fontconfig gdk_pixbuf cairo cups expat libgpgerror alsaLib nspr nss xorg.libXrender xorg.libX11 xorg.libXext xorg.libXdamage xorg.libXtst xorg.libXcomposite xorg.libXi xorg.libXfixes xorg.libXrandr diff --git a/pkgs/applications/misc/spacefm/default.nix b/pkgs/applications/misc/spacefm/default.nix index 5fffa6681cb2..1e4e72c4e484 100644 --- a/pkgs/applications/misc/spacefm/default.nix +++ b/pkgs/applications/misc/spacefm/default.nix @@ -1,6 +1,6 @@ -{ pkgs, fetchFromGitHub, stdenv, gtk3, udev, desktop_file_utils -, shared_mime_info, intltool, pkgconfig, wrapGAppsHook, ffmpegthumbnailer -, jmtpfs, ifuseSupport ? false, ifuse ? null, lsof, udisks, hicolor_icon_theme, adwaita-icon-theme }: +{ pkgs, fetchFromGitHub, stdenv, gtk3, udev, desktop-file-utils +, shared-mime-info, intltool, pkgconfig, wrapGAppsHook, ffmpegthumbnailer +, jmtpfs, ifuseSupport ? false, ifuse ? null, lsof, udisks2, hicolor-icon-theme, adwaita-icon-theme }: stdenv.mkDerivation rec { name = "spacefm-${version}"; @@ -23,13 +23,13 @@ stdenv.mkDerivation rec { postInstall = '' rm -f $out/etc/spacefm/spacefm.conf - ln -s /etc/spacefm/spacefm.conf $out/etc/spacefm/spacefm.conf + ln -s /etc/spacefm/spacefm.conf $out/etc/spacefm/spacefm.conf ''; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ - gtk3 udev desktop_file_utils shared_mime_info intltool - wrapGAppsHook ffmpegthumbnailer jmtpfs lsof udisks + gtk3 udev desktop-file-utils shared-mime-info intltool + wrapGAppsHook ffmpegthumbnailer jmtpfs lsof udisks2 ] ++ (if ifuseSupport then [ ifuse ] else []); # Introduced because ifuse doesn't build due to CVEs in libplist # Revert when libplist builds again… diff --git a/pkgs/applications/misc/sweethome3d/default.nix b/pkgs/applications/misc/sweethome3d/default.nix index 009eb488d7b4..68a192d78b84 100644 --- a/pkgs/applications/misc/sweethome3d/default.nix +++ b/pkgs/applications/misc/sweethome3d/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, fetchcvs, makeWrapper, makeDesktopItem, jdk, jre, ant -, gtk3, gsettings_desktop_schemas, p7zip, libXxf86vm }: +, gtk3, gsettings-desktop-schemas, p7zip, libXxf86vm }: let @@ -36,7 +36,7 @@ let patchelf --set-rpath ${libXxf86vm}/lib lib/java3d-1.6/linux/i586/libnativewindow_x11.so ''; - buildInputs = [ ant jdk jre makeWrapper p7zip gtk3 gsettings_desktop_schemas ]; + buildInputs = [ ant jdk jre makeWrapper p7zip gtk3 gsettings-desktop-schemas ]; buildPhase = '' ant furniture textures help @@ -54,7 +54,7 @@ let cp "${sweethome3dItem}/share/applications/"* $out/share/applications makeWrapper ${jre}/bin/java $out/bin/$exec \ - --prefix XDG_DATA_DIRS : "$XDG_ICON_DIRS:${gtk3.out}/share:${gsettings_desktop_schemas}/share:$out/share:$GSETTINGS_SCHEMAS_PATH" \ + --prefix XDG_DATA_DIRS : "$XDG_ICON_DIRS:${gtk3.out}/share:${gsettings-desktop-schemas}/share:$out/share:$GSETTINGS_SCHEMAS_PATH" \ --add-flags "-jar $out/share/java/${module}-${version}.jar -cp $out/share/java/Furniture.jar:$out/share/java/Textures.jar:$out/share/java/Help.jar ${if stdenv.system == "x86_64-linux" then "-d64" else "-d32"}" ''; diff --git a/pkgs/applications/misc/sweethome3d/editors.nix b/pkgs/applications/misc/sweethome3d/editors.nix index 37623caa1d4e..6c4b32ca9aa6 100644 --- a/pkgs/applications/misc/sweethome3d/editors.nix +++ b/pkgs/applications/misc/sweethome3d/editors.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, fetchcvs, makeWrapper, makeDesktopItem, jdk, jre, ant -, gtk3, gsettings_desktop_schemas, p7zip, sweethome3dApp }: +, gtk3, gsettings-desktop-schemas, p7zip, sweethome3dApp }: let @@ -26,7 +26,7 @@ let categories = "Application;Graphics;2DGraphics;3DGraphics;"; }; - buildInputs = [ ant jre jdk makeWrapper gtk3 gsettings_desktop_schemas ]; + buildInputs = [ ant jre jdk makeWrapper gtk3 gsettings-desktop-schemas ]; patchPhase = '' sed -i -e 's,../SweetHome3D,${application.src},g' build.xml @@ -43,7 +43,7 @@ let cp ${module}-${version}.jar $out/share/java/. cp "${editorItem}/share/applications/"* $out/share/applications makeWrapper ${jre}/bin/java $out/bin/$exec \ - --prefix XDG_DATA_DIRS : "$XDG_ICON_DIRS:${gtk3.out}/share:${gsettings_desktop_schemas}/share:$out/share:$GSETTINGS_SCHEMAS_PATH" \ + --prefix XDG_DATA_DIRS : "$XDG_ICON_DIRS:${gtk3.out}/share:${gsettings-desktop-schemas}/share:$out/share:$GSETTINGS_SCHEMAS_PATH" \ --add-flags "-jar $out/share/java/${module}-${version}.jar ${if stdenv.system == "x86_64-linux" then "-d64" else "-d32"}" ''; diff --git a/pkgs/applications/misc/synapse/default.nix b/pkgs/applications/misc/synapse/default.nix index cc267dceaf8b..a337b5eae996 100644 --- a/pkgs/applications/misc/synapse/default.nix +++ b/pkgs/applications/misc/synapse/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, gettext, pkgconfig, glib, libnotify, gtk3, libgee -, keybinder3, json_glib, zeitgeist, vala_0_38, hicolor_icon_theme, gobjectIntrospection +, keybinder3, json-glib, zeitgeist, vala_0_38, hicolor-icon-theme, gobjectIntrospection }: let @@ -18,8 +18,8 @@ in stdenv.mkDerivation rec { gobjectIntrospection ]; buildInputs = [ - glib libnotify gtk3 libgee keybinder3 json_glib zeitgeist - hicolor_icon_theme + glib libnotify gtk3 libgee keybinder3 json-glib zeitgeist + hicolor-icon-theme ]; meta = with stdenv.lib; { diff --git a/pkgs/applications/misc/tilda/default.nix b/pkgs/applications/misc/tilda/default.nix index 7378950b189b..d5b927bb536c 100644 --- a/pkgs/applications/misc/tilda/default.nix +++ b/pkgs/applications/misc/tilda/default.nix @@ -6,11 +6,11 @@ stdenv.mkDerivation rec { name = "tilda-${version}"; - version = "1.3.3"; + version = "1.4.1"; src = fetchurl { url = "https://github.com/lanoxx/tilda/archive/${name}.tar.gz"; - sha256 = "1cc4qbg1m3i04lj5p6i6xbd0zvy1320pxdgmjhz5p3j95ibsbfki"; + sha256 = "0w2hry2bqcqrkik4l100b1a9jlsih6sq8zwhfpl8zzfq20i00lfs"; }; nativeBuildInputs = [ autoreconfHook pkgconfig ]; diff --git a/pkgs/applications/misc/tilix/default.nix b/pkgs/applications/misc/tilix/default.nix index f83ca1b25fef..dc723336a9e9 100644 --- a/pkgs/applications/misc/tilix/default.nix +++ b/pkgs/applications/misc/tilix/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub, autoreconfHook, pkgconfig, dmd, gnome3, dbus -, gsettings_desktop_schemas, libsecret, desktop_file_utils, gettext, gtkd +, gsettings-desktop-schemas, libsecret, desktop-file-utils, gettext, gtkd , perlPackages, wrapGAppsHook, xdg_utils }: stdenv.mkDerivation rec { @@ -14,10 +14,10 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ - autoreconfHook dmd desktop_file_utils perlPackages.Po4a pkgconfig xdg_utils + autoreconfHook dmd desktop-file-utils perlPackages.Po4a pkgconfig xdg_utils wrapGAppsHook ]; - buildInputs = [ gnome3.dconf gettext gsettings_desktop_schemas gtkd dbus ]; + buildInputs = [ gnome3.dconf gettext gsettings-desktop-schemas gtkd dbus ]; preBuild = '' makeFlagsArray=(PERL5LIB="${perlPackages.Po4a}/lib/perl5") diff --git a/pkgs/applications/misc/tint2/default.nix b/pkgs/applications/misc/tint2/default.nix index 05deac81af6f..838e26463cd0 100644 --- a/pkgs/applications/misc/tint2/default.nix +++ b/pkgs/applications/misc/tint2/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchFromGitLab, pkgconfig, cmake, gettext, cairo, pango, pcre , glib, imlib2, gtk2, libXinerama, libXrender, libXcomposite, libXdamage , libX11, libXrandr, librsvg, libpthreadstubs, libXdmcp -, libstartup_notification, hicolor_icon_theme, wrapGAppsHook +, libstartup_notification, hicolor-icon-theme, wrapGAppsHook }: stdenv.mkDerivation rec { @@ -21,7 +21,7 @@ stdenv.mkDerivation rec { buildInputs = [ cairo pango pcre glib imlib2 gtk2 libXinerama libXrender libXcomposite libXdamage libX11 libXrandr librsvg libpthreadstubs - libXdmcp libstartup_notification hicolor_icon_theme ]; + libXdmcp libstartup_notification hicolor-icon-theme ]; postPatch = '' substituteInPlace CMakeLists.txt --replace /etc $out/etc diff --git a/pkgs/applications/misc/tnef/default.nix b/pkgs/applications/misc/tnef/default.nix index eebab6643a68..6cf1f27a104b 100644 --- a/pkgs/applications/misc/tnef/default.nix +++ b/pkgs/applications/misc/tnef/default.nix @@ -1,14 +1,14 @@ { stdenv, fetchFromGitHub, autoreconfHook }: stdenv.mkDerivation rec { - version = "1.4.15"; + version = "1.4.17"; name = "tnef-${version}"; src = fetchFromGitHub { owner = "verdammelt"; repo = "tnef"; rev = version; - sha256 = "0wm5ylppkjg518ldb9kzlx58a9l8z66gpz9ljalmyq6a77khd7pj"; + sha256 = "0cq2xh5wd74qn6k2nnw5rayxgqhjl3jbzf4zlc4babcwxrv32ldh"; }; doCheck = true; diff --git a/pkgs/applications/misc/translate-shell/default.nix b/pkgs/applications/misc/translate-shell/default.nix index 853cc5171053..3810da40849b 100644 --- a/pkgs/applications/misc/translate-shell/default.nix +++ b/pkgs/applications/misc/translate-shell/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { name = "${pname}-${version}"; pname = "translate-shell"; - version = "0.9.4"; + version = "0.9.6.6"; src = fetchFromGitHub { owner = "soimort"; repo = "translate-shell"; rev = "v" + version; - sha256 = "166zhic3k4z37vc8p1fnhc4xx7i7q0j30nr324frmp1mrnwrdib8"; + sha256 = "0hbwvc554v6fi4ardidwsnn8hk7p68p155yjllvljjawkbq4qljq"; }; phases = [ "buildPhase" "installPhase" "postFixup" ]; diff --git a/pkgs/applications/misc/udiskie/default.nix b/pkgs/applications/misc/udiskie/default.nix index 9f94b0aa48e9..ea79e29ff020 100644 --- a/pkgs/applications/misc/udiskie/default.nix +++ b/pkgs/applications/misc/udiskie/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub, asciidoc-full, gettext -, gobjectIntrospection, gtk3, hicolor_icon_theme, libnotify, librsvg +, gobjectIntrospection, gtk3, hicolor-icon-theme, libnotify, librsvg , udisks2, wrapGAppsHook , buildPythonApplication , docopt @@ -21,7 +21,7 @@ buildPythonApplication rec { buildInputs = [ asciidoc-full # For building man page. - hicolor_icon_theme + hicolor-icon-theme wrapGAppsHook librsvg # required for loading svg icons (udiskie uses svg icons) ]; diff --git a/pkgs/applications/misc/urh/default.nix b/pkgs/applications/misc/urh/default.nix index 78305675f17f..6aba4e751503 100644 --- a/pkgs/applications/misc/urh/default.nix +++ b/pkgs/applications/misc/urh/default.nix @@ -2,13 +2,13 @@ python3Packages.buildPythonApplication rec { name = "urh-${version}"; - version = "1.7.1"; + version = "1.9.2"; src = fetchFromGitHub { owner = "jopohl"; repo = "urh"; rev = "v${version}"; - sha256 = "00l1zs3qw89z1hlylprzrpf6nf7h22h0nw43h97gv775vaqqgczv"; + sha256 = "02jq2jas6gm08z4l09azi6dcsydaaaqbxfv4mb7pnrc1w8m593zr"; }; buildInputs = [ hackrf rtl-sdr ]; diff --git a/pkgs/applications/misc/viking/default.nix b/pkgs/applications/misc/viking/default.nix index 5af675a82acf..d090878f9768 100644 --- a/pkgs/applications/misc/viking/default.nix +++ b/pkgs/applications/misc/viking/default.nix @@ -1,5 +1,5 @@ { fetchurl, stdenv, makeWrapper, pkgconfig, intltool, gettext, gtk2, expat, curl -, gpsd, bc, file, gnome_doc_utils, libexif, libxml2, libxslt, scrollkeeper +, gpsd, bc, file, gnome-doc-utils, libexif, libxml2, libxslt, scrollkeeper , docbook_xml_dtd_412, gexiv2, sqlite, gpsbabel, expect }: stdenv.mkDerivation rec { @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ makeWrapper intltool gettext gtk2 expat curl gpsd bc file gnome_doc_utils + buildInputs = [ makeWrapper intltool gettext gtk2 expat curl gpsd bc file gnome-doc-utils libexif libxml2 libxslt scrollkeeper docbook_xml_dtd_412 gexiv2 sqlite ]; diff --git a/pkgs/applications/misc/volnoti/default.nix b/pkgs/applications/misc/volnoti/default.nix index 27b2a8f7134f..166811fb4ae3 100644 --- a/pkgs/applications/misc/volnoti/default.nix +++ b/pkgs/applications/misc/volnoti/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchFromGitHub, fetchpatch , pkgconfig, dbus, gdk_pixbuf, glib, libX11, gtk2, librsvg -, dbus_glib, autoreconfHook, wrapGAppsHook }: +, dbus-glib, autoreconfHook, wrapGAppsHook }: stdenv.mkDerivation rec { name = "volnoti-unstable-${version}"; @@ -25,7 +25,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig autoreconfHook wrapGAppsHook ]; buildInputs = [ - dbus gdk_pixbuf glib libX11 gtk2 dbus_glib librsvg + dbus gdk_pixbuf glib libX11 gtk2 dbus-glib librsvg ]; meta = with stdenv.lib; { diff --git a/pkgs/applications/misc/worker/default.nix b/pkgs/applications/misc/worker/default.nix index 0d38f1b93e73..968539336a9c 100644 --- a/pkgs/applications/misc/worker/default.nix +++ b/pkgs/applications/misc/worker/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "worker-${version}"; - version = "3.8.5"; + version = "3.15.0"; src = fetchurl { url = "http://www.boomerangsworld.de/cms/worker/downloads/${name}.tar.gz"; - sha256 = "1xy02jdf60wg2jycinl6682xg4zvphdj80f8xgs26ip45iqgkmvw"; + sha256 = "0baaxa10jnf4nralhjdi7525wd1wj0161z2ixz1j5pb0rl38brl8"; }; buildInputs = [ libX11 ]; diff --git a/pkgs/applications/misc/workrave/default.nix b/pkgs/applications/misc/workrave/default.nix index fbf68f317dee..0394fa83d4a4 100644 --- a/pkgs/applications/misc/workrave/default.nix +++ b/pkgs/applications/misc/workrave/default.nix @@ -2,7 +2,7 @@ , autoconf, automake, gettext, intltool, libtool, pkgconfig , libICE, libSM, libXScrnSaver, libXtst, cheetah , glib, glibmm, gtkmm2, atk, pango, pangomm, cairo, cairomm -, dbus, dbus_glib, GConf, gconfmm, gdome2, gstreamer, libsigcxx }: +, dbus, dbus-glib, GConf, gconfmm, gdome2, gstreamer, libsigcxx }: stdenv.mkDerivation rec { name = "workrave-${version}"; @@ -33,7 +33,7 @@ stdenv.mkDerivation rec { buildInputs = [ libICE libSM libXScrnSaver libXtst cheetah glib glibmm gtkmm2 atk pango pangomm cairo cairomm - dbus dbus_glib GConf gconfmm gdome2 gstreamer libsigcxx + dbus dbus-glib GConf gconfmm gdome2 gstreamer libsigcxx ]; preConfigure = "./autogen.sh"; diff --git a/pkgs/applications/misc/xiphos/default.nix b/pkgs/applications/misc/xiphos/default.nix index a895c9b4537b..bb7b22c40a26 100644 --- a/pkgs/applications/misc/xiphos/default.nix +++ b/pkgs/applications/misc/xiphos/default.nix @@ -3,11 +3,11 @@ , intltool , docbook2x, docbook_xml_dtd_412, libxslt , sword, clucene_core, biblesync -, gnome_doc_utils +, gnome-doc-utils , libgsf, gconf , gtkhtml, libglade, scrollkeeper , webkitgtk -, dbus_glib, enchant, isocodes, libuuid, icu +, dbus-glib, enchant, isocodes, libuuid, icu , wrapGAppsHook }: @@ -24,8 +24,8 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig wrapGAppsHook ]; buildInputs = [ python intltool docbook2x docbook_xml_dtd_412 libxslt - sword clucene_core biblesync gnome_doc_utils libgsf gconf gtkhtml - libglade scrollkeeper webkitgtk dbus_glib enchant isocodes libuuid icu ]; + sword clucene_core biblesync gnome-doc-utils libgsf gconf gtkhtml + libglade scrollkeeper webkitgtk dbus-glib enchant isocodes libuuid icu ]; prePatch = '' patchShebangs .; diff --git a/pkgs/applications/networking/browsers/chromium/common.nix b/pkgs/applications/networking/browsers/chromium/common.nix index bb5a7046dd49..f5ec42974c74 100644 --- a/pkgs/applications/networking/browsers/chromium/common.nix +++ b/pkgs/applications/networking/browsers/chromium/common.nix @@ -1,4 +1,4 @@ -{ stdenv, ninja, which, nodejs, fetchurl, gnutar +{ stdenv, ninja, which, nodejs, fetchurl, fetchpatch, gnutar # default dependencies , bzip2, flac, speex, libopus @@ -11,7 +11,7 @@ , nspr, systemd, kerberos , utillinux, alsaLib , bison, gperf -, glib, gtk2, gtk3, dbus_glib +, glib, gtk2, gtk3, dbus-glib , libXScrnSaver, libXcursor, libXtst, mesa , protobuf, speechd, libXdamage, cups , ffmpeg, harfbuzz, harfbuzz-icu, libxslt, libxml2 @@ -25,7 +25,7 @@ , enableHotwording ? false , enableWideVine ? false , gnomeSupport ? false, gnome ? null -, gnomeKeyringSupport ? false, libgnome_keyring3 ? null +, gnomeKeyringSupport ? false, libgnome-keyring3 ? null , proprietaryCodecs ? true , cupsSupport ? true , pulseSupport ? false, libpulseaudio ? null @@ -44,10 +44,14 @@ let # source tree. extraAttrs = buildFun base; - gentooPatch = name: sha256: fetchurl { + gentooPatch = name: sha256: fetchpatch { url = "https://gitweb.gentoo.org/repo/gentoo.git/plain/www-client/chromium/files/${name}"; inherit sha256; }; + githubPatch = commit: sha256: fetchpatch { + url = "https://github.com/chromium/chromium/commit/${commit}.patch"; + inherit sha256; + }; mkGnFlags = let @@ -125,10 +129,10 @@ let nspr nss systemd utillinux alsaLib bison gperf kerberos - glib gtk2 gtk3 dbus_glib + glib gtk2 gtk3 dbus-glib libXScrnSaver libXcursor libXtst mesa pciutils protobuf speechd libXdamage - ] ++ optional gnomeKeyringSupport libgnome_keyring3 + ] ++ optional gnomeKeyringSupport libgnome-keyring3 ++ optionals gnomeSupport [ gnome.GConf libgcrypt ] ++ optionals cupsSupport [ libgcrypt cups ] ++ optional pulseSupport libpulseaudio; @@ -147,6 +151,8 @@ let ] ++ optionals (versionRange "64" "65") [ (gentooPatch "chromium-cups-r0.patch" "0hyjlfh062c8h54j4b27y4dq5yzd4w6mxzywk3s02yf6cj3cbkrl") (gentooPatch "chromium-angle-r0.patch" "0izdrqwsyr48117dhvwdsk8c6dkrnq2njida1q4mb1lagvwbz7gc") + # missing ninja dep https://github.com/NixOS/nixpkgs/issues/35296#issuecomment-368666833 + (githubPatch "b1e3cfd4f9bfe43a1e08c5670b51c8c80d3e6372" "17vih86rpsy282r8ikrf2q5gfjdwqzvyn8859i75xzvl8agyhbaa") ] ++ optionals (versionRange "65" "66") [ #(gentooPatch "chromium-gcc-r0.patch" "127xdwabizn5gz8rf1qsw62i7m0b5bsfjqxv4kdbsnizmjanddf8") #(gentooPatch "chromium-memcpy-r0.patch" "1d3vra59wjg2lva7ddv55ff6l57mk9k50llsplr0b7vxk0lh0ps5") diff --git a/pkgs/applications/networking/browsers/chromium/default.nix b/pkgs/applications/networking/browsers/chromium/default.nix index 426161475369..1f6eb7c178fb 100644 --- a/pkgs/applications/networking/browsers/chromium/default.nix +++ b/pkgs/applications/networking/browsers/chromium/default.nix @@ -1,5 +1,5 @@ { newScope, stdenv, makeWrapper, makeDesktopItem, ed -, glib, gtk3, gnome3, gsettings_desktop_schemas +, glib, gtk3, gnome3, gsettings-desktop-schemas # package customization , channel ? "stable" @@ -75,7 +75,7 @@ in stdenv.mkDerivation { makeWrapper ed # needed for GSETTINGS_SCHEMAS_PATH - gsettings_desktop_schemas glib gtk3 + gsettings-desktop-schemas glib gtk3 # needed for XDG_ICON_DIRS gnome3.defaultIconTheme diff --git a/pkgs/applications/networking/browsers/chromium/upstream-info.nix b/pkgs/applications/networking/browsers/chromium/upstream-info.nix index bc9105acc77f..bca9e1c9a1c1 100644 --- a/pkgs/applications/networking/browsers/chromium/upstream-info.nix +++ b/pkgs/applications/networking/browsers/chromium/upstream-info.nix @@ -1,18 +1,18 @@ # This file is autogenerated from update.sh in the same directory. { beta = { - sha256 = "1ggj1a7v2n4v34kb8gx2hcswlayryr9g62zqlry26bwmvz6qzsx9"; - sha256bin64 = "1ah8088d8p674dj5bijk5maapmiq9iap1w2i81dl0hhpyqxx3h3i"; - version = "65.0.3325.73"; + sha256 = "1kdv6r3cmy7lqynnk4ylkn81x91wkv2k3hqh41sb50h65s7h9b3y"; + sha256bin64 = "18bralcc4frapglcfa5az3z8i74calrblf4zzavisvpkmnil7ypa"; + version = "65.0.3325.88"; }; dev = { - sha256 = "13klppyl6rbkd3ffp8y8d95l4mc72gmj45y34wynyfap6b4z1lmh"; - sha256bin64 = "0w1ipy858p9lbpcrjhs44kncgw7c5qv1929h0w65ybgsggjqh0gz"; - version = "66.0.3343.3"; + sha256 = "1ykg5c3bayv6pwz74dglxcmbsalz6p04c3r0y15xkw2iyv5jjcam"; + sha256bin64 = "1phw755ra3pckvhapm26amr6b3652k8f7sxanjyq118zkpga21w2"; + version = "66.0.3350.0"; }; stable = { - sha256 = "0mf4qjmrjnxs7mx9c5pymavmib7l2a2kxiy0kqk3mma1y90qnc7k"; - sha256bin64 = "0idij274g53lzvgz9h5xxi8l841vvvr78hp25ndbmpv4a2p1d83b"; - version = "64.0.3282.167"; + sha256 = "0q0q1whspmzyln04gxhgl3jd2vrgb4imh8r9qw6c06i3b63j3l2z"; + sha256bin64 = "1sq8mmdw32n00swm4q9q5q3vw6q5sp8yiaxag4rbzvxkfnr3vi4g"; + version = "64.0.3282.186"; }; } diff --git a/pkgs/applications/networking/browsers/dwb/default.nix b/pkgs/applications/networking/browsers/dwb/default.nix index 137b463a1e1d..ec585e53fd23 100644 --- a/pkgs/applications/networking/browsers/dwb/default.nix +++ b/pkgs/applications/networking/browsers/dwb/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchgit, pkgconfig, makeWrapper, libsoup, webkitgtk24x-gtk2, gtk2, gnutls -, json_c, m4, glib_networking, gsettings_desktop_schemas, dconf }: +, json_c, m4, glib-networking, gsettings-desktop-schemas, dconf }: stdenv.mkDerivation { name = "dwb-2016-03-21"; @@ -11,7 +11,7 @@ stdenv.mkDerivation { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ makeWrapper gsettings_desktop_schemas libsoup + buildInputs = [ makeWrapper gsettings-desktop-schemas libsoup webkitgtk24x-gtk2 gtk2 gnutls json_c m4 ]; # There are Xlib and gtk warnings therefore I have set Wno-error @@ -19,10 +19,10 @@ stdenv.mkDerivation { preFixup='' wrapProgram "$out/bin/dwb" \ - --prefix GIO_EXTRA_MODULES : "${glib_networking.out}/lib/gio/modules:${stdenv.lib.getLib dconf}/lib/gio/modules" \ + --prefix GIO_EXTRA_MODULES : "${glib-networking.out}/lib/gio/modules:${stdenv.lib.getLib dconf}/lib/gio/modules" \ --prefix XDG_DATA_DIRS : "$GSETTINGS_SCHEMAS_PATH:$out/share" wrapProgram "$out/bin/dwbem" \ - --prefix GIO_EXTRA_MODULES : "${glib_networking.out}/lib/gio/modules" + --prefix GIO_EXTRA_MODULES : "${glib-networking.out}/lib/gio/modules" ''; meta = with stdenv.lib; { diff --git a/pkgs/applications/networking/browsers/eolie/default.nix b/pkgs/applications/networking/browsers/eolie/default.nix index e41783ddf5ba..d1741774d347 100644 --- a/pkgs/applications/networking/browsers/eolie/default.nix +++ b/pkgs/applications/networking/browsers/eolie/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchgit, intltool, itstool, meson, ninja, pkgconfig, wrapGAppsHook -, git, glib, glib_networking, gsettings_desktop_schemas, gst_all_1, gtk3 +, git, glib, glib-networking, gsettings-desktop-schemas, gst_all_1, gtk3 , gtkspell3, libsecret, python36, python36Packages, webkitgtk }: stdenv.mkDerivation rec { @@ -23,8 +23,8 @@ stdenv.mkDerivation rec { buildInputs = [ git # required to download ad blocking DB - glib_networking - gsettings_desktop_schemas + glib-networking + gsettings-desktop-schemas gst_all_1.gstreamer gst_all_1.gst-plugins-base gst_all_1.gst-plugins-good diff --git a/pkgs/applications/networking/browsers/firefox-bin/beta_sources.nix b/pkgs/applications/networking/browsers/firefox-bin/beta_sources.nix index 680ffe8382a6..224af61bfa47 100644 --- a/pkgs/applications/networking/browsers/firefox-bin/beta_sources.nix +++ b/pkgs/applications/networking/browsers/firefox-bin/beta_sources.nix @@ -1,975 +1,975 @@ { - version = "59.0b11"; + version = "59.0b13"; sources = [ - { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/ach/firefox-59.0b11.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b13/linux-x86_64/ach/firefox-59.0b13.tar.bz2"; locale = "ach"; arch = "linux-x86_64"; - sha512 = "5e8287db112a59ccdcf9460d66d170538a312583253f3ed98c251820f75ca1de4b4ee7efbc5a9d6b6cba167d2bc451f62801bfee8bf4022cfe640312f0b5c759"; + sha512 = "3385d1c5540bd0066c90fb63b2f18105085092e1d89ae1a0badc9e00f8392f4dc20b65ac6a04f22239332ca1ccef0995df433d656d6b105be03c0129063e7198"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/af/firefox-59.0b11.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b13/linux-x86_64/af/firefox-59.0b13.tar.bz2"; locale = "af"; arch = "linux-x86_64"; - sha512 = "43bbad7b87c5b0043177d633bef8cf60136ab78e5f1f5c23b5d5c39dd08940f7603d997dfda84b94b5fd581d25a68f03ac71015c5fad500f6df7704c52b58520"; + sha512 = "1eaa00e379a4f3dbf162edb4a79b3642b8b16a882e6b106475ccbb962072e6148becde4c068f41cf3061741d30ad1cd72e5b04f587eb9ca9483e248e8366a522"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/an/firefox-59.0b11.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b13/linux-x86_64/an/firefox-59.0b13.tar.bz2"; locale = "an"; arch = "linux-x86_64"; - sha512 = "80889c60222d86fe544456c54a2307033f70040edcdba8102f4e11d6be887b5e66c397b31c897f38402ef64565a6d122f7f8f894d8ea7f6180391680949d25a8"; + sha512 = "0cb52af20dcec4785865a479096d211213257ddf19b033a2d9b078727192be9b44eccbb548248e32f0f4a19348b5e8c5ebf27c8dc94f1872d5ebf3e369b74006"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/ar/firefox-59.0b11.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b13/linux-x86_64/ar/firefox-59.0b13.tar.bz2"; locale = "ar"; arch = "linux-x86_64"; - sha512 = "bf85daa07fc424e522f9ad79a1dc849fda667342a4069cb0bb1669001cdeeb4f45811dd19f6c85dd5efcf375c66c5bc3941ff46ccfbbb5e8d1b5bfcdc99a368b"; + sha512 = "099945735a3fe0470eb67f50fe1e2c92f49d7d34b5ca7a1c35167eee05aadf705dc6a3f4fdbeb78ff609c8892ecadd2cb32cf3a11cea6879f734220895172982"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/as/firefox-59.0b11.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b13/linux-x86_64/as/firefox-59.0b13.tar.bz2"; locale = "as"; arch = "linux-x86_64"; - sha512 = "aca2c69d98b9a92592b4e8076ca6778a39f2124ad38d541940ea903c7678e5bc5bd823a596d042891e790aa19fa2aa5f98859b9c7e0e08a8c87b3ebb62314bab"; + sha512 = "30efe149f3f941a19d47ed8ebf0eac53997397f550f56d79c548054df8e14cccd5b1b3d1728b5d9f347cb2e373eff2f2f9403c1741f70c43c958b7566d70a55a"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/ast/firefox-59.0b11.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b13/linux-x86_64/ast/firefox-59.0b13.tar.bz2"; locale = "ast"; arch = "linux-x86_64"; - sha512 = "5c0dd82ee28fa52cd3935553923909f4b817677b455bd36d4efb93d4669b6cb08eec56c388c4c4fdc60cca26565dc2fcbf42fc2b4b80301dc128fa3483d359cf"; + sha512 = "c962aef0f068f3dcc3c9fe82f670b3a2de132ad761144fa009d052622f6578bb42875e39fc311265709e87aac58fcf62e60b0f0d5f98f05193f385be7296b35d"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/az/firefox-59.0b11.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b13/linux-x86_64/az/firefox-59.0b13.tar.bz2"; locale = "az"; arch = "linux-x86_64"; - sha512 = "9f2dca2a53bdd3f0ba26e7e26f4f7ce73704f023c0732c98b0c16399176af91c69bc6d6e05ed8adadc2caecbfa710bf5cd7dc638be9a7457c63e408a6da9a66d"; + sha512 = "994d995198817480b0f4d198f5a6289d4a380a183b2e350054e6efe1d77ca3dad5c48ce8aeccf5e4813047fca9d856bd392614d7adfe49fac52cd950e05e0bdf"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/be/firefox-59.0b11.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b13/linux-x86_64/be/firefox-59.0b13.tar.bz2"; locale = "be"; arch = "linux-x86_64"; - sha512 = "2f4092f1a6fd5f0019307a6bff056f363aadccf4495718476094e8ac888b01df762d96b0b33fa48a37b8c4a85606ea1e1504a855587b8a531c405ccb0b011a23"; + sha512 = "48a60eb7e794fdb5f060f2bd0e359d22ee14ac5916819fada7bf939d07b31993dbfeaf58ce6906c40890c4b35e7edb47fa3f0b33f5d327d649ae5fe2417c5bcc"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/bg/firefox-59.0b11.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b13/linux-x86_64/bg/firefox-59.0b13.tar.bz2"; locale = "bg"; arch = "linux-x86_64"; - sha512 = "c0a61c4ab8615b7315edcc70eee200f742c37dfe9287fd77f58a982cabac233b00ce6725e1bb6d66194db5f1e6a4f5351041e11825ed98573e75320713638e69"; + sha512 = "caa1de35213a8bc492bdec4b003b7b4b072f268f59ff0ccde04e69b64aefd18ee2ef3bc1fca698be4a38251fe76863f8b613279ac060644d3c84e3191977f2dd"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/bn-BD/firefox-59.0b11.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b13/linux-x86_64/bn-BD/firefox-59.0b13.tar.bz2"; locale = "bn-BD"; arch = "linux-x86_64"; - sha512 = "f6fc7d1f9a459654e2775782e0355385840ee6cf7f43d47084e5e60866d785dcff25f08a6de17d8bec8169b069566d599cd6780a3ba71458bcdfa2253b718231"; + sha512 = "466bf0e7394dffbac4f58736c51dcabfb1d9634baf73d28af3ccd270bc1267a51b5c31802d48fc225918f8b15fc4291eb5e959802804510f5967db298e6054ae"; 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} ]; } diff --git a/pkgs/applications/networking/browsers/firefox-bin/default.nix b/pkgs/applications/networking/browsers/firefox-bin/default.nix index 347ceba9ab4a..c1a440009b8f 100644 --- a/pkgs/applications/networking/browsers/firefox-bin/default.nix +++ b/pkgs/applications/networking/browsers/firefox-bin/default.nix @@ -4,7 +4,7 @@ , cairo , curl , cups -, dbus_glib +, dbus-glib , dbus_libs , fontconfig , freetype @@ -27,7 +27,7 @@ , libXinerama , libXrender , libXt -, libcanberra_gtk2 +, libcanberra-gtk2 , libgnome , libgnomeui , defaultIconTheme @@ -92,7 +92,7 @@ stdenv.mkDerivation { cairo curl cups - dbus_glib + dbus-glib dbus_libs fontconfig freetype @@ -115,7 +115,7 @@ stdenv.mkDerivation { libXinerama libXrender libXt - libcanberra_gtk2 + libcanberra-gtk2 libgnome libgnomeui mesa diff --git a/pkgs/applications/networking/browsers/firefox-bin/devedition_sources.nix b/pkgs/applications/networking/browsers/firefox-bin/devedition_sources.nix index c2b867beb3e9..1bb7ffd1b092 100644 --- a/pkgs/applications/networking/browsers/firefox-bin/devedition_sources.nix +++ b/pkgs/applications/networking/browsers/firefox-bin/devedition_sources.nix @@ -1,975 +1,975 @@ { - version = "59.0b11"; 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} - { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/tr/firefox-59.0b11.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b13/linux-i686/tr/firefox-59.0b13.tar.bz2"; locale = "tr"; arch = "linux-i686"; - sha512 = "ad62e59b5aa4278df0e5127da5bcdac63d68032e0a77e666973c01c936057756b888b04916eeaa5be3aef2d953d0e5ff84f17dde3bd8521e68451e5bb9f05c05"; + sha512 = "f4816172c5979b7b3bc4bf33084f319bf964876356b08a32d2337e7e5c599596f41f4e4efeb5996a53b462635f4d2ac51bd95978fb0f00fd74596f9203f1d94c"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/uk/firefox-59.0b11.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b13/linux-i686/uk/firefox-59.0b13.tar.bz2"; locale = "uk"; arch = "linux-i686"; - sha512 = "bd07b0d5813452b98e9d1c5985b628ada4a2904703b9a2239a89a0f277a7f7d9e2e4db66ab32a988dd7f95f56be3bf09db68964f57c1e8a0a24e8eae44b7359e"; + sha512 = "143e683fcf134dd6062ab87569798d34de1f3bf53ff2d50a73b35e2cc95d83d02654a047c7530cc5c1e34ddc791ce9d455ffba9f1f93d8b782e0968ef41621b9"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/ur/firefox-59.0b11.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b13/linux-i686/ur/firefox-59.0b13.tar.bz2"; locale = "ur"; arch = "linux-i686"; - sha512 = "ef7e8108b27e106073b838ec09b4d0abebcabdeb288a62855be0d076cc481278006f7cfe3ff79ac38ef125157eb06645f44d56fec200d4b1b0ae238da4c16312"; + sha512 = "bb82ed997dd8d2b15f3881325b4f879b8eb49cbbd661da99994a54be21ceaedfa3901fa56214936c5ac05430035e41e9a0ac407afe73db289dc656f70a2199de"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/uz/firefox-59.0b11.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b13/linux-i686/uz/firefox-59.0b13.tar.bz2"; locale = "uz"; arch = "linux-i686"; - sha512 = "73f23a0b9d0bbdbff8fe2d8461442b83d0f8d36e95c46b65b6dac257d2a62ade8aad71401d3bdca3c65b59f794ea9a918205c4b5887e7e1e63756d5133464337"; + sha512 = "d2db8f09274c73d63729fc32fa8dbe3a51f6421e16a741ea39e6cab1bc3d0e833fedd26678e68ac92aeb2caf01cdc7a02bfa518391ce20f9a0855a498297a001"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/vi/firefox-59.0b11.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b13/linux-i686/vi/firefox-59.0b13.tar.bz2"; locale = "vi"; arch = "linux-i686"; - sha512 = "48e8c0f5d28f527b2a3f979dfdeebc39efcde646d146e4ca6cc3b35a827019b16c31a841582594179dfadec7a933ff0da0e4d35e2b8f2c50dee0c5260228b723"; + sha512 = "5b964331ae4567f12e3241eaf30a6d7d13b4da1bc4cd300a86d8a3a4102c6e8d71af5e6cdebe8a6399a2525345fcba06683c06216779aa2a6f375a56b0c71e53"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/xh/firefox-59.0b11.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b13/linux-i686/xh/firefox-59.0b13.tar.bz2"; locale = "xh"; arch = "linux-i686"; - sha512 = "5da170e2a95e38c20fd5d130eaf097d19a166c6f66c90d770460dd520dce89a62b368a818202fff3ba35b7740ce75b775eb5a792de529c81ff4bd08edb75bed2"; + sha512 = "56556a238bc874e931e56f00879953bee1903ad1f1e67e2ae6dcabb8f65c97a74feda0f98d27f3e0a28b2a813d66d956696f001e08b809901e3bffec246f8f66"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/zh-CN/firefox-59.0b11.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b13/linux-i686/zh-CN/firefox-59.0b13.tar.bz2"; locale = "zh-CN"; arch = "linux-i686"; - sha512 = "7a07ce7713d66358852cda20fb6ccca921e7255bd35c9ee8383de6fbc70b978042916b7ec86b44fdb93908ff5e01df581fb0ba68d5e7999f31968966fd901922"; + sha512 = "cdf97069df00610f1f964de5aff4dc7134e7cb27768b15177c03b96c486b5856816b685a6acd5308c0e334672d39ed094f35a2bbe8046465f8ce6c9ed803baea"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/zh-TW/firefox-59.0b11.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b13/linux-i686/zh-TW/firefox-59.0b13.tar.bz2"; locale = "zh-TW"; arch = "linux-i686"; - sha512 = "1ac549170fa1cb76b5dc2924577b1ec1af482d47822ec1451d3bdcefaa345381f7637b77989fad1d369c2218c01ae0294c1a105c637f327d378725e19273d771"; + sha512 = "ad5266e66e06bf5d0dd674e57bb368e66917beda800cf58eeef9b5dafffb2f6272ebfa67e03a3a0ffd2a6d9d273fb3f93e6feee011e8971e760d8af04ec91330"; } ]; } diff --git a/pkgs/applications/networking/browsers/firefox/common.nix b/pkgs/applications/networking/browsers/firefox/common.nix index 69e935d78762..0abf3753dc6d 100644 --- a/pkgs/applications/networking/browsers/firefox/common.nix +++ b/pkgs/applications/networking/browsers/firefox/common.nix @@ -3,7 +3,7 @@ , isTorBrowserLike ? false }: { lib, stdenv, pkgconfig, pango, perl, python, zip, libIDL -, libjpeg, zlib, dbus, dbus_glib, bzip2, xorg +, libjpeg, zlib, dbus, dbus-glib, bzip2, xorg , freetype, fontconfig, file, nspr, nss, libnotify , yasm, mesa, sqlite, unzip, makeWrapper , hunspell, libevent, libstartup_notification, libvpx @@ -73,7 +73,7 @@ stdenv.mkDerivation (rec { buildInputs = [ gtk2 perl zip libIDL libjpeg zlib bzip2 - dbus dbus_glib pango freetype fontconfig xorg.libXi + dbus dbus-glib pango freetype fontconfig xorg.libXi xorg.libX11 xorg.libXrender xorg.libXft xorg.libXt file nspr libnotify xorg.pixman yasm mesa xorg.libXScrnSaver xorg.scrnsaverproto diff --git a/pkgs/applications/networking/browsers/firefox/wrapper.nix b/pkgs/applications/networking/browsers/firefox/wrapper.nix index 12ea714fb234..8d08eceb1692 100644 --- a/pkgs/applications/networking/browsers/firefox/wrapper.nix +++ b/pkgs/applications/networking/browsers/firefox/wrapper.nix @@ -2,10 +2,10 @@ ## various stuff that can be plugged in , flashplayer, hal-flash -, MPlayerPlugin, ffmpeg, gst_all, xorg, libpulseaudio, libcanberra_gtk2 +, MPlayerPlugin, ffmpeg, gst_all, xorg, libpulseaudio, libcanberra-gtk2 , jrePlugin, icedtea_web , trezor-bridge, bluejeans, djview4, adobe-reader -, google_talk_plugin, fribid, gnome3/*.gnome_shell*/ +, google_talk_plugin, fribid, gnome3/*.gnome-shell*/ , esteidfirefoxplugin , vlc_npapi , browserpass, chrome-gnome-shell @@ -52,7 +52,7 @@ let ++ lib.optional icedtea icedtea_web ++ lib.optional (cfg.enableGoogleTalkPlugin or false) google_talk_plugin ++ lib.optional (cfg.enableFriBIDPlugin or false) fribid - ++ lib.optional (cfg.enableGnomeExtensions or false) gnome3.gnome_shell + ++ lib.optional (cfg.enableGnomeExtensions or false) gnome3.gnome-shell ++ lib.optional (cfg.enableTrezor or false) trezor-bridge ++ lib.optional (cfg.enableBluejeans or false) bluejeans ++ lib.optional (cfg.enableAdobeReader or false) adobe-reader @@ -73,7 +73,7 @@ let ++ lib.optional (enableAdobeFlash && (cfg.enableAdobeFlashDRM or false)) hal-flash ++ lib.optional (config.pulseaudio or true) libpulseaudio; gst-plugins = with gst_all; [ gst-plugins-base gst-plugins-good gst-plugins-bad gst-plugins-ugly gst-ffmpeg ]; - gtk_modules = [ libcanberra_gtk2 ]; + gtk_modules = [ libcanberra-gtk2 ]; in stdenv.mkDerivation { inherit name; diff --git a/pkgs/applications/networking/browsers/google-chrome/default.nix b/pkgs/applications/networking/browsers/google-chrome/default.nix index 17c285d9bdf7..eaa05726f1c0 100644 --- a/pkgs/applications/networking/browsers/google-chrome/default.nix +++ b/pkgs/applications/networking/browsers/google-chrome/default.nix @@ -4,7 +4,7 @@ , glib, fontconfig, freetype, pango, cairo, libX11, libXi, atk, gconf, nss, nspr , libXcursor, libXext, libXfixes, libXrender, libXScrnSaver, libXcomposite, libxcb , alsaLib, libXdamage, libXtst, libXrandr, expat, cups -, dbus_libs, gtk2, gtk3, gdk_pixbuf, gcc-unwrapped, at_spi2_atk +, dbus_libs, gtk2, gtk3, gdk_pixbuf, gcc-unwrapped, at-spi2-atk , kerberos # command line arguments which are always set e.g "--disable-gpu" @@ -33,7 +33,7 @@ # Only needed for getting information about upstream binaries , chromium -, gsettings_desktop_schemas +, gsettings-desktop-schemas , gnome2, gnome3 }: @@ -57,7 +57,7 @@ let libexif liberation_ttf curl utillinux xdg_utils wget flac harfbuzz icu libpng opusWithCustomModes snappy speechd - bzip2 libcap at_spi2_atk + bzip2 libcap at-spi2-atk kerberos ] ++ optional pulseSupport libpulseaudio ++ [ gtk ]; @@ -75,7 +75,7 @@ in stdenv.mkDerivation rec { patchelf # needed for GSETTINGS_SCHEMAS_PATH - gsettings_desktop_schemas glib gtk + gsettings-desktop-schemas glib gtk # needed for XDG_ICON_DIRS gnome.defaultIconTheme diff --git a/pkgs/applications/networking/browsers/jumanji/default.nix b/pkgs/applications/networking/browsers/jumanji/default.nix index e013f54a39ea..26a7e883c60c 100644 --- a/pkgs/applications/networking/browsers/jumanji/default.nix +++ b/pkgs/applications/networking/browsers/jumanji/default.nix @@ -1,5 +1,5 @@ -{ stdenv, fetchgit, pkgconfig, girara, gtk, webkitgtk, glib_networking, makeWrapper -, gsettings_desktop_schemas }: +{ stdenv, fetchgit, pkgconfig, girara, gtk, webkitgtk, glib-networking, makeWrapper +, gsettings-desktop-schemas }: stdenv.mkDerivation rec { name = "jumanji-${version}"; @@ -12,13 +12,13 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ girara gtk webkitgtk makeWrapper gsettings_desktop_schemas ]; + buildInputs = [ girara gtk webkitgtk makeWrapper gsettings-desktop-schemas ]; makeFlags = [ "PREFIX=$(out)" ]; preFixup='' wrapProgram "$out/bin/jumanji" \ - --prefix GIO_EXTRA_MODULES : "${glib_networking.out}/lib/gio/modules" \ + --prefix GIO_EXTRA_MODULES : "${glib-networking.out}/lib/gio/modules" \ --prefix XDG_DATA_DIRS : "$GSETTINGS_SCHEMAS_PATH" ''; diff --git a/pkgs/applications/networking/browsers/midori/default.nix b/pkgs/applications/networking/browsers/midori/default.nix index cea6d5dbeea4..f7d4f1a69417 100644 --- a/pkgs/applications/networking/browsers/midori/default.nix +++ b/pkgs/applications/networking/browsers/midori/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, cmake, pkgconfig, intltool, vala_0_34, wrapGAppsHook , gtk3, webkitgtk, librsvg, libnotify, sqlite -, glib_networking, gsettings_desktop_schemas, libsoup, pcre, gnome3 -, libxcb, libpthreadstubs, libXdmcp, libxkbcommon, epoxy, at_spi2_core +, glib-networking, gsettings-desktop-schemas, libsoup, pcre, gnome3 +, libxcb, libpthreadstubs, libXdmcp, libxkbcommon, epoxy, at-spi2-core , zeitgeistSupport ? false, zeitgeist ? null }: @@ -33,8 +33,8 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - gtk3 webkitgtk librsvg libnotify sqlite gsettings_desktop_schemas pcre gnome3.gcr - libxcb libpthreadstubs libXdmcp libxkbcommon epoxy at_spi2_core + gtk3 webkitgtk librsvg libnotify sqlite gsettings-desktop-schemas pcre gnome3.gcr + libxcb libpthreadstubs libXdmcp libxkbcommon epoxy at-spi2-core (libsoup.override {gnomeSupport = true; valaSupport = true;}) ] ++ stdenv.lib.optionals zeitgeistSupport [ zeitgeist @@ -49,6 +49,6 @@ stdenv.mkDerivation rec { NIX_LDFLAGS="-lX11"; preFixup = '' - gappsWrapperArgs+=(--prefix XDG_DATA_DIRS : "$GSETTINGS_SCHEMAS_PATH" --prefix GIO_EXTRA_MODULES : "${glib_networking.out}/lib/gio/modules") + gappsWrapperArgs+=(--prefix XDG_DATA_DIRS : "$GSETTINGS_SCHEMAS_PATH" --prefix GIO_EXTRA_MODULES : "${glib-networking.out}/lib/gio/modules") ''; } diff --git a/pkgs/applications/networking/browsers/mozilla-plugins/google-talk-plugin/default.nix b/pkgs/applications/networking/browsers/mozilla-plugins/google-talk-plugin/default.nix index 461db272b12e..e56066e156f5 100644 --- a/pkgs/applications/networking/browsers/mozilla-plugins/google-talk-plugin/default.nix +++ b/pkgs/applications/networking/browsers/mozilla-plugins/google-talk-plugin/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, rpm, cpio, mesa_noglu, xorg, cairo , libpng, gtk2, glib, gdk_pixbuf, fontconfig, freetype, curl -, dbus_glib, alsaLib, libpulseaudio, systemd, pango +, dbus-glib, alsaLib, libpulseaudio, systemd, pango }: with stdenv.lib; @@ -36,7 +36,7 @@ let stdenv.cc.cc alsaLib libpulseaudio - dbus_glib + dbus-glib systemd curl pango diff --git a/pkgs/applications/networking/browsers/palemoon/default.nix b/pkgs/applications/networking/browsers/palemoon/default.nix index cd4f95097889..c17e16f0d695 100644 --- a/pkgs/applications/networking/browsers/palemoon/default.nix +++ b/pkgs/applications/networking/browsers/palemoon/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchFromGitHub, makeDesktopItem , pkgconfig, autoconf213, alsaLib, bzip2, cairo -, dbus, dbus_glib, file, fontconfig, freetype +, dbus, dbus-glib, file, fontconfig, freetype , gstreamer, gst-plugins-base, gst_all_1 , gtk2, hunspell, icu, libevent, libjpeg, libnotify , libstartup_notification, libvpx, makeWrapper, mesa @@ -39,7 +39,7 @@ stdenv.mkDerivation rec { }; buildInputs = [ - alsaLib bzip2 cairo dbus dbus_glib file fontconfig freetype + alsaLib bzip2 cairo dbus dbus-glib file fontconfig freetype gst-plugins-base gstreamer gst_all_1.gst-plugins-base gtk2 hunspell icu libevent libjpeg libnotify libstartup_notification libvpx makeWrapper mesa nspr nss pango perl pkgconfig python diff --git a/pkgs/applications/networking/browsers/qutebrowser/default.nix b/pkgs/applications/networking/browsers/qutebrowser/default.nix index 9142ecde8598..2f9170eff87b 100644 --- a/pkgs/applications/networking/browsers/qutebrowser/default.nix +++ b/pkgs/applications/networking/browsers/qutebrowser/default.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchurl, fetchzip, python3Packages -, makeWrapper, wrapGAppsHook, qtbase, glib_networking +, makeWrapper, wrapGAppsHook, qtbase, glib-networking , asciidoc, docbook_xml_dtd_45, docbook_xsl, libxml2 , libxslt, gst_all_1 ? null , withPdfReader ? true @@ -43,7 +43,7 @@ in python3Packages.buildPythonApplication rec { buildInputs = [ qtbase - glib_networking + glib-networking ] ++ lib.optionals withMediaPlayback (with gst_all_1; [ gst-plugins-base gst-plugins-good gst-plugins-bad gst-plugins-ugly gst-libav diff --git a/pkgs/applications/networking/browsers/surf/default.nix b/pkgs/applications/networking/browsers/surf/default.nix index 1aa9bf044b05..88680414d1c6 100644 --- a/pkgs/applications/networking/browsers/surf/default.nix +++ b/pkgs/applications/networking/browsers/surf/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl , pkgconfig, wrapGAppsHook -, glib, glib_networking, gsettings_desktop_schemas, gtk, libsoup, webkitgtk +, glib, glib-networking, gsettings-desktop-schemas, gtk, libsoup, webkitgtk , patches ? null }: @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig wrapGAppsHook ]; - buildInputs = [ glib glib_networking gsettings_desktop_schemas gtk libsoup webkitgtk ]; + buildInputs = [ glib glib-networking gsettings-desktop-schemas gtk libsoup webkitgtk ]; inherit patches; diff --git a/pkgs/applications/networking/browsers/tor-browser-bundle-bin/default.nix b/pkgs/applications/networking/browsers/tor-browser-bundle-bin/default.nix index d64c7a20cb99..299ec43a8b90 100644 --- a/pkgs/applications/networking/browsers/tor-browser-bundle-bin/default.nix +++ b/pkgs/applications/networking/browsers/tor-browser-bundle-bin/default.nix @@ -9,7 +9,7 @@ , atk , cairo , dbus -, dbus_glib +, dbus-glib , fontconfig , freetype , gdk_pixbuf @@ -42,8 +42,8 @@ # Wrapper runtime , coreutils , glibcLocales -, hicolor_icon_theme -, shared_mime_info +, hicolor-icon-theme +, shared-mime-info # Whether to disable multiprocess support to work around crashing tabs # TODO: fix the underlying problem instead of this terrible work-around @@ -62,7 +62,7 @@ let atk cairo dbus - dbus_glib + dbus-glib fontconfig freetype gdk_pixbuf @@ -261,8 +261,8 @@ stdenv.mkDerivation rec { EOF WRAPPER_XDG_DATA_DIRS=${concatMapStringsSep ":" (x: "${x}/share") [ - hicolor_icon_theme - shared_mime_info + hicolor-icon-theme + shared-mime-info ]} # Generate wrapper diff --git a/pkgs/applications/networking/browsers/tor-browser-bundle/default.nix b/pkgs/applications/networking/browsers/tor-browser-bundle/default.nix index 508ab6ec432e..65ebaa3f80c5 100644 --- a/pkgs/applications/networking/browsers/tor-browser-bundle/default.nix +++ b/pkgs/applications/networking/browsers/tor-browser-bundle/default.nix @@ -8,8 +8,8 @@ # Wrapper runtime , coreutils -, hicolor_icon_theme -, shared_mime_info +, hicolor-icon-theme +, shared-mime-info , noto-fonts , noto-fonts-emoji @@ -197,8 +197,8 @@ stdenv.mkDerivation rec { # Generate a suitable wrapper wrapper_PATH=${makeBinPath [ coreutils ]} wrapper_XDG_DATA_DIRS=${concatMapStringsSep ":" (x: "${x}/share") [ - hicolor_icon_theme - shared_mime_info + hicolor-icon-theme + shared-mime-info ]} ${optionalString audioSupport '' diff --git a/pkgs/applications/networking/browsers/uzbl/default.nix b/pkgs/applications/networking/browsers/uzbl/default.nix index 6ac8d9f1f6e7..8c9f23996ede 100644 --- a/pkgs/applications/networking/browsers/uzbl/default.nix +++ b/pkgs/applications/networking/browsers/uzbl/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, python3, makeWrapper -, webkit, glib_networking, gsettings_desktop_schemas, python2Packages +, webkit, glib-networking, gsettings-desktop-schemas, python2Packages }: # This package needs python3 during buildtime, # but Python 2 + packages during runtime. @@ -31,7 +31,7 @@ stdenv.mkDerivation rec { preFixup = '' for f in $out/bin/*; do wrapProgram $f \ - --prefix GIO_EXTRA_MODULES : "${glib_networking.out}/lib/gio/modules" \ + --prefix GIO_EXTRA_MODULES : "${glib-networking.out}/lib/gio/modules" \ --prefix PYTHONPATH : "$PYTHONPATH" \ --prefix XDG_DATA_DIRS : "$GSETTINGS_SCHEMAS_PATH:$out/share" done @@ -39,6 +39,6 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig python3 makeWrapper ]; - buildInputs = [ gsettings_desktop_schemas webkit ]; + buildInputs = [ gsettings-desktop-schemas webkit ]; propagatedBuildInputs = with python2Packages; [ pygtk six ]; } diff --git a/pkgs/applications/networking/browsers/vimb/default.nix b/pkgs/applications/networking/browsers/vimb/default.nix index 5b10932e73b3..251315619cfd 100644 --- a/pkgs/applications/networking/browsers/vimb/default.nix +++ b/pkgs/applications/networking/browsers/vimb/default.nix @@ -1,5 +1,5 @@ -{ stdenv, fetchurl, pkgconfig, libsoup, webkit, gtk2, glib_networking -, gsettings_desktop_schemas, makeWrapper +{ stdenv, fetchurl, pkgconfig, libsoup, webkit, gtk2, glib-networking +, gsettings-desktop-schemas, makeWrapper }: stdenv.mkDerivation rec { @@ -12,13 +12,13 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ makeWrapper gtk2 libsoup webkit gsettings_desktop_schemas ]; + buildInputs = [ makeWrapper gtk2 libsoup webkit gsettings-desktop-schemas ]; makeFlags = [ "PREFIX=$(out)" ]; preFixup = '' wrapProgram "$out/bin/vimb" \ - --prefix GIO_EXTRA_MODULES : "${glib_networking.out}/lib/gio/modules" \ + --prefix GIO_EXTRA_MODULES : "${glib-networking.out}/lib/gio/modules" \ --prefix XDG_DATA_DIRS : "$GSETTINGS_SCHEMAS_PATH" ''; diff --git a/pkgs/applications/networking/browsers/vimprobable2/default.nix b/pkgs/applications/networking/browsers/vimprobable2/default.nix index e6275b2f9592..54abc7dedff4 100644 --- a/pkgs/applications/networking/browsers/vimprobable2/default.nix +++ b/pkgs/applications/networking/browsers/vimprobable2/default.nix @@ -1,5 +1,5 @@ -{ stdenv, fetchurl, makeWrapper, glib, glib_networking, gtk2, libsoup, libX11, perl, - pkgconfig, webkit, gsettings_desktop_schemas }: +{ stdenv, fetchurl, makeWrapper, glib, glib-networking, gtk2, libsoup, libX11, perl, + pkgconfig, webkit, gsettings-desktop-schemas }: stdenv.mkDerivation rec { version = "1.4.2"; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ makeWrapper gtk2 libsoup libX11 perl webkit gsettings_desktop_schemas ]; + buildInputs = [ makeWrapper gtk2 libsoup libX11 perl webkit gsettings-desktop-schemas ]; hardeningDisable = [ "format" ]; @@ -18,7 +18,7 @@ stdenv.mkDerivation rec { preFixup = '' wrapProgram "$out/bin/vimprobable2" \ - --prefix GIO_EXTRA_MODULES : "${glib_networking.out}/lib/gio/modules" \ + --prefix GIO_EXTRA_MODULES : "${glib-networking.out}/lib/gio/modules" \ --prefix XDG_DATA_DIRS : "$GSETTINGS_SCHEMAS_PATH" ''; diff --git a/pkgs/applications/networking/browsers/vivaldi/default.nix b/pkgs/applications/networking/browsers/vivaldi/default.nix index 2612df3efcff..6bd9614e08de 100644 --- a/pkgs/applications/networking/browsers/vivaldi/default.nix +++ b/pkgs/applications/networking/browsers/vivaldi/default.nix @@ -4,7 +4,7 @@ , freetype, fontconfig, libXft, libXrender, libxcb, expat, libXau, libXdmcp , libuuid, xz , gstreamer, gst-plugins-base, libxml2 -, glib, gtk3, pango, gdk_pixbuf, cairo, atk, at_spi2_atk, gnome3 +, glib, gtk3, pango, gdk_pixbuf, cairo, atk, at-spi2-atk, gnome3 , nss, nspr , patchelf, makeWrapper , proprietaryCodecs ? false, vivaldi-ffmpeg-codecs ? null @@ -30,7 +30,7 @@ stdenv.mkDerivation rec { buildInputs = [ stdenv.cc.cc stdenv.cc.libc zlib libX11 libXt libXext libSM libICE libxcb libXi libXft libXcursor libXfixes libXScrnSaver libXcomposite libXdamage libXtst libXrandr - atk at_spi2_atk alsaLib dbus_libs cups gtk3 gdk_pixbuf libexif ffmpeg systemd + atk at-spi2-atk alsaLib dbus_libs cups gtk3 gdk_pixbuf libexif ffmpeg systemd freetype fontconfig libXrender libuuid expat glib nss nspr gstreamer libxml2 gst-plugins-base pango cairo gnome3.gconf ] ++ stdenv.lib.optional proprietaryCodecs vivaldi-ffmpeg-codecs; diff --git a/pkgs/applications/networking/browsers/vivaldi/ffmpeg-codecs.nix b/pkgs/applications/networking/browsers/vivaldi/ffmpeg-codecs.nix index 542bcbc41b0d..11aa0ce706d6 100644 --- a/pkgs/applications/networking/browsers/vivaldi/ffmpeg-codecs.nix +++ b/pkgs/applications/networking/browsers/vivaldi/ffmpeg-codecs.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, fetchpatch -, dbus_glib, gtk2, gtk3, libexif, libpulseaudio, libXScrnSaver, ninja, nss +, dbus-glib, gtk2, gtk3, libexif, libpulseaudio, libXScrnSaver, ninja, nss , pciutils, pkgconfig, python2, xdg_utils }: @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { buildInputs = [ ]; nativeBuildInputs = [ - dbus_glib gtk2 gtk3 libexif libpulseaudio libXScrnSaver ninja nss pciutils pkgconfig + dbus-glib gtk2 gtk3 libexif libpulseaudio libXScrnSaver ninja nss pciutils pkgconfig python2 xdg_utils ]; diff --git a/pkgs/applications/networking/cluster/kompose/default.nix b/pkgs/applications/networking/cluster/kompose/default.nix index b2c97d1ea396..ff0f664154aa 100644 --- a/pkgs/applications/networking/cluster/kompose/default.nix +++ b/pkgs/applications/networking/cluster/kompose/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { name = "kompose-${version}"; - version = "1.5.0"; + version = "1.9.0"; goPackagePath = "github.com/kubernetes/kompose"; @@ -10,7 +10,7 @@ buildGoPackage rec { rev = "v${version}"; owner = "kubernetes"; repo = "kompose"; - sha256 = "1r5f8jbr2c1xxb5fpfgy23w4m30zahhmrw23jlk1hpx2w1pi1iyh"; + sha256 = "00yvih5gn67sw9v30a0rpaj1zag7k02i4biw1p37agxih0aphc86"; }; meta = with stdenv.lib; { diff --git a/pkgs/applications/networking/cluster/kops/default.nix b/pkgs/applications/networking/cluster/kops/default.nix index 41099192176c..ddb8951740cb 100644 --- a/pkgs/applications/networking/cluster/kops/default.nix +++ b/pkgs/applications/networking/cluster/kops/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { name = "kops-${version}"; - version = "1.8.0"; + version = "1.8.1"; goPackagePath = "k8s.io/kops"; @@ -10,7 +10,7 @@ buildGoPackage rec { rev = version; owner = "kubernetes"; repo = "kops"; - sha256 = "0vaa18vhwk132fv7i896513isp66wnz9gn0b5613n3x28q0gvkmg"; + sha256 = "12nyr0iw1xwp60apli3nlq2vyn4jk3qjrb404m2syx2mqbnn47my"; }; buildInputs = [go-bindata]; diff --git a/pkgs/applications/networking/cluster/kubernetes/default.nix b/pkgs/applications/networking/cluster/kubernetes/default.nix index e2f431e2a5e5..090fc98566de 100644 --- a/pkgs/applications/networking/cluster/kubernetes/default.nix +++ b/pkgs/applications/networking/cluster/kubernetes/default.nix @@ -1,4 +1,4 @@ -{ stdenv, lib, fetchFromGitHub, removeReferencesTo, which, go, go-bindata, makeWrapper, rsync +{ stdenv, lib, fetchFromGitHub, fetchpatch, removeReferencesTo, which, go, go-bindata, makeWrapper, rsync , iptables, coreutils , components ? [ "cmd/kubeadm" @@ -29,6 +29,14 @@ stdenv.mkDerivation rec { outputs = ["out" "man" "pause"]; + patches = [ + # patch is from https://github.com/kubernetes/kubernetes/pull/58207 + (fetchpatch { + url = "https://github.com/kubernetes/kubernetes/commit/a990b04dc8a7d8408a71eee40db93621cf2b6d1b.patch"; + sha256 = "0piqilc5c9frikl74hamkffawwg1mvdwfxqvjnmk6wdma43dbb7w"; + }) + ]; + postPatch = '' substituteInPlace "hack/lib/golang.sh" --replace "_cgo" "" substituteInPlace "hack/generate-docs.sh" --replace "make" "make SHELL=${stdenv.shell}" diff --git a/pkgs/applications/networking/corebird/default.nix b/pkgs/applications/networking/corebird/default.nix index affcbcc4b3c0..d5b327723276 100644 --- a/pkgs/applications/networking/corebird/default.nix +++ b/pkgs/applications/networking/corebird/default.nix @@ -1,6 +1,6 @@ -{ stdenv, fetchFromGitHub, gtk3, json_glib, sqlite, libsoup, gettext, vala_0_32 +{ stdenv, fetchFromGitHub, gtk3, json-glib, sqlite, libsoup, gettext, vala_0_32 , automake, autoconf, libtool, pkgconfig, gnome3, gst_all_1, wrapGAppsHook -, glib_networking }: +, glib-networking }: stdenv.mkDerivation rec { version = "1.7.3"; @@ -20,7 +20,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ automake autoconf libtool pkgconfig wrapGAppsHook ]; buildInputs = [ - gtk3 json_glib sqlite libsoup gettext vala_0_32 gnome3.dconf gnome3.gspell glib_networking + gtk3 json-glib sqlite libsoup gettext vala_0_32 gnome3.dconf gnome3.gspell glib-networking ] ++ (with gst_all_1; [ gstreamer gst-plugins-base gst-plugins-good (gst-plugins-bad.override { gtkSupport = true; }) gst-libav ]); meta = { diff --git a/pkgs/applications/networking/ftp/filezilla/default.nix b/pkgs/applications/networking/ftp/filezilla/default.nix index ddfa4fd607d1..49ac1d26dda6 100644 --- a/pkgs/applications/networking/ftp/filezilla/default.nix +++ b/pkgs/applications/networking/ftp/filezilla/default.nix @@ -1,13 +1,13 @@ { stdenv, fetchurl, dbus, gnutls, wxGTK30, libidn, tinyxml, gettext , pkgconfig, xdg_utils, gtk2, sqlite, pugixml, libfilezilla, nettle }: -let version = "3.30.0"; in +let version = "3.31.0"; in stdenv.mkDerivation { name = "filezilla-${version}"; src = fetchurl { url = "mirror://sourceforge/project/filezilla/FileZilla_Client/${version}/FileZilla_${version}_src.tar.bz2"; - sha256 = "1w0zqkccbsbmnjc9pfd1i3ywzwrdp0pprryvdk4sfn5ms9nnf2wi"; + sha256 = "1rfysb8dil35a7bzj2kw0mzzkys39d7yn6ipsbk8l6rkwfvnii8l"; }; configureFlags = [ diff --git a/pkgs/applications/networking/ids/bro/default.nix b/pkgs/applications/networking/ids/bro/default.nix index 7ae3e8c73611..577252bc69e0 100644 --- a/pkgs/applications/networking/ids/bro/default.nix +++ b/pkgs/applications/networking/ids/bro/default.nix @@ -2,11 +2,11 @@ , geoip, gperftools, python, swig }: stdenv.mkDerivation rec { - name = "bro-2.5.2"; + name = "bro-2.5.3"; src = fetchurl { url = "http://www.bro.org/downloads/${name}.tar.gz"; - sha256 = "0w5rynw278nl6pdl5s7gsmxjwkl6z1g5pcm6byg930k26yyb35db"; + sha256 = "09b227j1c0ggihbhbyphd7lnh26mpz07z1s0h148dg6fwqagm13k"; }; nativeBuildInputs = [ cmake flex bison file ]; diff --git a/pkgs/applications/networking/ids/daq/default.nix b/pkgs/applications/networking/ids/daq/default.nix index 5261bd451e0b..8f4b54cec86a 100644 --- a/pkgs/applications/networking/ids/daq/default.nix +++ b/pkgs/applications/networking/ids/daq/default.nix @@ -1,12 +1,12 @@ {stdenv, fetchurl, flex, bison, libpcap, libdnet, libnfnetlink, libnetfilter_queue}: stdenv.mkDerivation rec { - name = "daq-2.0.6"; + name = "daq-2.2.2"; src = fetchurl { name = "${name}.tar.gz"; url = "https://snort.org/downloads/archive/snort/${name}.tar.gz"; - sha256 = "1jz7gc9n6sr677ssv61qvcxybdrmsll4z7g6hsmax2p0fc91s3ml"; + sha256 = "0yvzscy7vqj7s5rccza0f7p6awghfm3yaxihx1h57lqspg51in3w"; }; buildInputs = [ flex bison libpcap libdnet libnfnetlink libnetfilter_queue]; diff --git a/pkgs/applications/networking/ids/snort/default.nix b/pkgs/applications/networking/ids/snort/default.nix index 434ae803f0ac..e3a917a12eb3 100644 --- a/pkgs/applications/networking/ids/snort/default.nix +++ b/pkgs/applications/networking/ids/snort/default.nix @@ -1,13 +1,13 @@ {stdenv, fetchurl, libpcap, pcre, libdnet, daq, zlib, flex, bison, makeWrapper}: stdenv.mkDerivation rec { - version = "2.9.8.2"; + version = "2.9.11.1"; name = "snort-${version}"; src = fetchurl { name = "${name}.tar.gz"; url = "https://snort.org/downloads/archive/snort/${name}.tar.gz"; - sha256 = "0cwk02jan0vw6r3jl3vrf31vfp7i4c1r4yhb42h4gyhd6lnh2xa0"; + sha256 = "1ka67zrrhs32c729v4h76mvv2723mij0adxx0iaza2d1qpm3lswz"; }; buildInputs = [ makeWrapper libpcap pcre libdnet daq zlib flex bison ]; diff --git a/pkgs/applications/networking/instant-messengers/bitlbee-facebook/default.nix b/pkgs/applications/networking/instant-messengers/bitlbee-facebook/default.nix index 94490d9f0341..9793fd234a18 100644 --- a/pkgs/applications/networking/instant-messengers/bitlbee-facebook/default.nix +++ b/pkgs/applications/networking/instant-messengers/bitlbee-facebook/default.nix @@ -1,4 +1,4 @@ -{ fetchurl, fetchFromGitHub, stdenv, bitlbee, autoconf, automake, libtool, pkgconfig, glib, json_glib }: +{ fetchurl, fetchFromGitHub, stdenv, bitlbee, autoconf, automake, libtool, pkgconfig, glib, json-glib }: with stdenv.lib; stdenv.mkDerivation rec { @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ autoconf automake libtool pkgconfig ]; - buildInputs = [ bitlbee glib json_glib ]; + buildInputs = [ bitlbee glib json-glib ]; preConfigure = '' export BITLBEE_PLUGINDIR=$out/lib/bitlbee diff --git a/pkgs/applications/networking/instant-messengers/dino/default.nix b/pkgs/applications/networking/instant-messengers/dino/default.nix index 35cb2100254b..810422dcd3f3 100644 --- a/pkgs/applications/networking/instant-messengers/dino/default.nix +++ b/pkgs/applications/networking/instant-messengers/dino/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchFromGitHub , vala, cmake, ninja, wrapGAppsHook, pkgconfig, gettext -, gobjectIntrospection, gnome3, glib, gdk_pixbuf, gtk3, glib_networking +, gobjectIntrospection, gnome3, glib, gdk_pixbuf, gtk3, glib-networking , xorg, libXdmcp, libxkbcommon , libnotify, libsoup , libgcrypt , epoxy -, at_spi2_core +, at-spi2-core , sqlite , dbus , gpgme @@ -33,7 +33,7 @@ stdenv.mkDerivation rec { buildInputs = [ gobjectIntrospection - glib_networking + glib-networking glib gnome3.libgee gnome3.defaultIconTheme @@ -50,7 +50,7 @@ stdenv.mkDerivation rec { libXdmcp libxkbcommon epoxy - at_spi2_core + at-spi2-core dbus gettext ]; diff --git a/pkgs/applications/networking/instant-messengers/ekiga/default.nix b/pkgs/applications/networking/instant-messengers/ekiga/default.nix index 283d38ef5c74..003ffbfc7d1e 100644 --- a/pkgs/applications/networking/instant-messengers/ekiga/default.nix +++ b/pkgs/applications/networking/instant-messengers/ekiga/default.nix @@ -1,7 +1,7 @@ { stdenv, glib, fetchurl, fetchpatch, cyrus_sasl, gettext, openldap, ptlib, opal, libXv, rarian, intltool -, perl, perlXMLParser, evolution_data_server, gnome_doc_utils, avahi, autoreconfHook -, libsigcxx, gtk, dbus_glib, libnotify, libXext, xextproto, gnome3, boost, libsecret -, pkgconfig, libxml2, videoproto, unixODBC, db, nspr, nss, zlib, hicolor_icon_theme +, perl, perlXMLParser, evolution-data-server, gnome-doc-utils, avahi, autoreconfHook +, libsigcxx, gtk, dbus-glib, libnotify, libXext, xextproto, gnome3, boost, libsecret +, pkgconfig, libxml2, videoproto, unixODBC, db, nspr, nss, zlib, hicolor-icon-theme , libXrandr, randrproto, which, libxslt, libtasn1, gmp, nettle, sqlite, makeWrapper }: stdenv.mkDerivation rec { @@ -13,8 +13,8 @@ stdenv.mkDerivation rec { }; buildInputs = [ cyrus_sasl gettext openldap ptlib opal libXv rarian intltool - perl perlXMLParser evolution_data_server gnome_doc_utils avahi - libsigcxx gtk dbus_glib libnotify libXext xextproto sqlite + perl perlXMLParser evolution-data-server gnome-doc-utils avahi + libsigcxx gtk dbus-glib libnotify libXext xextproto sqlite gnome3.libsoup glib gnome3.defaultIconTheme boost autoreconfHook pkgconfig libxml2 videoproto unixODBC db nspr nss zlib libsecret libXrandr randrproto which libxslt libtasn1 diff --git a/pkgs/applications/networking/instant-messengers/pidgin-plugins/pidgin-opensteamworks/default.nix b/pkgs/applications/networking/instant-messengers/pidgin-plugins/pidgin-opensteamworks/default.nix index fbfd36a59282..457e76d0a82c 100644 --- a/pkgs/applications/networking/instant-messengers/pidgin-plugins/pidgin-opensteamworks/default.nix +++ b/pkgs/applications/networking/instant-messengers/pidgin-plugins/pidgin-opensteamworks/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, pidgin, unzip, glib, json_glib, nss, nspr, libgnome_keyring } : +{ stdenv, fetchFromGitHub, pidgin, unzip, glib, json-glib, nss, nspr, libgnome-keyring } : stdenv.mkDerivation rec { name = "pidgin-opensteamworks-${version}"; @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { unzip releases/icons.zip -d $out/share/pixmaps/pidgin/protocols/ ''; - buildInputs = [ pidgin unzip glib json_glib nss nspr libgnome_keyring ]; + buildInputs = [ pidgin unzip glib json-glib nss nspr libgnome-keyring ]; meta = with stdenv.lib; { homepage = https://github.com/EionRobb/pidgin-opensteamworks; diff --git a/pkgs/applications/networking/instant-messengers/pidgin-plugins/pidgin-skypeweb/default.nix b/pkgs/applications/networking/instant-messengers/pidgin-plugins/pidgin-skypeweb/default.nix index 7ab9b1947915..6e589febe6d9 100644 --- a/pkgs/applications/networking/instant-messengers/pidgin-plugins/pidgin-skypeweb/default.nix +++ b/pkgs/applications/networking/instant-messengers/pidgin-plugins/pidgin-skypeweb/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, pkgconfig, pidgin, json_glib }: +{ stdenv, fetchFromGitHub, pkgconfig, pidgin, json-glib }: stdenv.mkDerivation rec { name = "pidgin-skypeweb-${version}"; @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { ''; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ pidgin json_glib ]; + buildInputs = [ pidgin json-glib ]; makeFlags = [ "PLUGIN_DIR_PURPLE=/lib/pidgin/" diff --git a/pkgs/applications/networking/instant-messengers/pidgin-plugins/pidgin-xmpp-receipts/default.nix b/pkgs/applications/networking/instant-messengers/pidgin-plugins/pidgin-xmpp-receipts/default.nix index c69de60c6cf5..f482e12a4bc9 100644 --- a/pkgs/applications/networking/instant-messengers/pidgin-plugins/pidgin-xmpp-receipts/default.nix +++ b/pkgs/applications/networking/instant-messengers/pidgin-plugins/pidgin-xmpp-receipts/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchFromGitHub, pidgin } : let - version = "0.7"; + version = "0.8"; in stdenv.mkDerivation rec { name = "pidgin-xmpp-receipts-${version}"; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { owner = "noonien-d"; repo = "pidgin-xmpp-receipts"; rev = "release_${version}"; - sha256 = "1ackqwsqgy1nfggl9na4jicv7hd542aazkg629y2jmbyj1dl3kjm"; + sha256 = "13kwaymzkymjsdv8q95byd173i4vanj211vgx9cm0y8ag2r3cjsb"; }; buildInputs = [ pidgin ]; diff --git a/pkgs/applications/networking/instant-messengers/pidgin-plugins/purple-facebook/default.nix b/pkgs/applications/networking/instant-messengers/pidgin-plugins/purple-facebook/default.nix index 632f2543f57c..37b490304c4f 100644 --- a/pkgs/applications/networking/instant-messengers/pidgin-plugins/purple-facebook/default.nix +++ b/pkgs/applications/networking/instant-messengers/pidgin-plugins/purple-facebook/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, fetchhg, pidgin, glib, json_glib, mercurial, autoreconfHook } : +{ stdenv, fetchFromGitHub, fetchhg, pidgin, glib, json-glib, mercurial, autoreconfHook } : let @@ -53,7 +53,7 @@ in stdenv.mkDerivation rec { ''; nativeBuildInputs = [ autoreconfHook ]; - buildInputs = [pidgin glib json_glib mercurial]; + buildInputs = [pidgin glib json-glib mercurial]; meta = with stdenv.lib; { inherit (src.meta) homepage; diff --git a/pkgs/applications/networking/instant-messengers/pidgin-plugins/purple-hangouts/default.nix b/pkgs/applications/networking/instant-messengers/pidgin-plugins/purple-hangouts/default.nix index 07cf66e572a7..460143e35494 100644 --- a/pkgs/applications/networking/instant-messengers/pidgin-plugins/purple-hangouts/default.nix +++ b/pkgs/applications/networking/instant-messengers/pidgin-plugins/purple-hangouts/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchhg, pidgin, glib, json_glib, protobuf, protobufc }: +{ stdenv, fetchhg, pidgin, glib, json-glib, protobuf, protobufc }: stdenv.mkDerivation rec { name = "purple-hangouts-hg-${version}"; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { sha256 = "0cs7dcd44lkc2anradyddjvmfvnl46ixw4idaf1m9fd7j35mg7b1"; }; - buildInputs = [ pidgin glib json_glib protobuf protobufc ]; + buildInputs = [ pidgin glib json-glib protobuf protobufc ]; installPhase = '' install -Dm755 -t $out/lib/pidgin/ libhangouts.so diff --git a/pkgs/applications/networking/instant-messengers/pidgin-plugins/purple-matrix/default.nix b/pkgs/applications/networking/instant-messengers/pidgin-plugins/purple-matrix/default.nix index 2bf67f44c948..a6d893fd95a4 100644 --- a/pkgs/applications/networking/instant-messengers/pidgin-plugins/purple-matrix/default.nix +++ b/pkgs/applications/networking/instant-messengers/pidgin-plugins/purple-matrix/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchgit, pkgconfig, pidgin, json_glib, glib, http-parser } : +{ stdenv, fetchgit, pkgconfig, pidgin, json-glib, glib, http-parser } : let version = "2016-07-11"; @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ pidgin json_glib glib http-parser ]; + buildInputs = [ pidgin json-glib glib http-parser ]; installPhase = '' install -Dm755 -t $out/lib/pidgin/ libmatrix.so diff --git a/pkgs/applications/networking/instant-messengers/pidgin-plugins/skype4pidgin/default.nix b/pkgs/applications/networking/instant-messengers/pidgin-plugins/skype4pidgin/default.nix index d02c437945e0..ddb9217d5e22 100644 --- a/pkgs/applications/networking/instant-messengers/pidgin-plugins/skype4pidgin/default.nix +++ b/pkgs/applications/networking/instant-messengers/pidgin-plugins/skype4pidgin/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, pidgin, libnotify, gdk_pixbuf, glib, dbus -, dbus_glib }: +, dbus-glib }: stdenv.mkDerivation rec { name = "skype4pidgin-novas0x2a-20120411-6c53f7c48f"; @@ -30,7 +30,7 @@ stdenv.mkDerivation rec { postInstall = "ln -s \$out/lib/pidgin \$out/share/pidgin-otr"; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ pidgin libnotify gdk_pixbuf glib dbus dbus_glib ]; + buildInputs = [ pidgin libnotify gdk_pixbuf glib dbus dbus-glib ]; meta = { homepage = https://github.com/novas0x2a/skype4pidgin; diff --git a/pkgs/applications/networking/instant-messengers/pidgin/default.nix b/pkgs/applications/networking/instant-messengers/pidgin/default.nix index bd3fc82f7cba..3ec45702b175 100644 --- a/pkgs/applications/networking/instant-messengers/pidgin/default.nix +++ b/pkgs/applications/networking/instant-messengers/pidgin/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, makeWrapper, pkgconfig, gtk2, gtkspell2, aspell , gst_all_1, startupnotification, gettext , perl, perlXMLParser, libxml2, nss, nspr, farstream -, libXScrnSaver, ncurses, avahi, dbus, dbus_glib, intltool, libidn +, libXScrnSaver, ncurses, avahi, dbus, dbus-glib, intltool, libidn , lib, python, libICE, libXext, libSM , cyrus_sasl ? null , openssl ? null @@ -33,7 +33,7 @@ let unwrapped = stdenv.mkDerivation rec { gst_all_1.gstreamer gst_all_1.gst-plugins-base gst_all_1.gst-plugins-good libxml2 nss nspr farstream libXScrnSaver ncurses python - avahi dbus dbus_glib intltool libidn + avahi dbus dbus-glib intltool libidn libICE libXext libSM cyrus_sasl ] ++ (lib.optional (openssl != null) openssl) diff --git a/pkgs/applications/networking/instant-messengers/skypeforlinux/default.nix b/pkgs/applications/networking/instant-messengers/skypeforlinux/default.nix index f75487565e1d..87b2ee223815 100644 --- a/pkgs/applications/networking/instant-messengers/skypeforlinux/default.nix +++ b/pkgs/applications/networking/instant-messengers/skypeforlinux/default.nix @@ -6,7 +6,7 @@ let # Please keep the version x.y.0.z and do not update to x.y.76.z because the # source of the latter disappears much faster. - version = "8.13.0.2"; + version = "8.16.0.4"; rpath = stdenv.lib.makeLibraryPath [ alsaLib @@ -27,7 +27,7 @@ let gnome2.gtk gnome2.pango - gnome2.gnome_keyring + gnome2.gnome-keyring libnotify libpulseaudio @@ -57,7 +57,7 @@ let if stdenv.system == "x86_64-linux" then fetchurl { url = "https://repo.skype.com/deb/pool/main/s/skypeforlinux/skypeforlinux_${version}_amd64.deb"; - sha256 = "15p1v6y8fwx9qj3ag645bvrcw7c1j20v63iy75s4xwsv1siz8cf9"; + sha256 = "1qc5qd07r768q9wkr2fq1q731hslh21i8rs41jb6pbn3ai65mxf5"; } else throw "Skype for linux is not supported on ${stdenv.system}"; diff --git a/pkgs/applications/networking/instant-messengers/telegram/tdesktop/default.nix b/pkgs/applications/networking/instant-messengers/telegram/tdesktop/default.nix index c4158d280e2b..67b116274a2d 100644 --- a/pkgs/applications/networking/instant-messengers/telegram/tdesktop/default.nix +++ b/pkgs/applications/networking/instant-messengers/telegram/tdesktop/default.nix @@ -1,6 +1,6 @@ { mkDerivation, lib, fetchgit, fetchpatch -, pkgconfig, gyp, cmake, gcc7, makeWrapper -, qtbase, qtimageformats, gtk3, libappindicator-gtk3 +, pkgconfig, gyp, cmake, makeWrapper +, qtbase, qtimageformats, gtk3, libappindicator-gtk3, libnotify , dee, ffmpeg, openalSoft, minizip, libopus, alsaLib, libpulseaudio, range-v3 }: @@ -31,7 +31,12 @@ mkDerivation rec { }) ]; - nativeBuildInputs = [ pkgconfig gyp cmake gcc7 makeWrapper ]; + postPatch = '' + substituteInPlace Telegram/SourceFiles/platform/linux/linux_libs.cpp --replace '"appindicator"' '"${libappindicator-gtk3}/lib/libappindicator3.so"' + substituteInPlace Telegram/SourceFiles/platform/linux/linux_libnotify.cpp --replace '"notify"' '"${libnotify}/lib/libnotify.so"' + ''; + + nativeBuildInputs = [ pkgconfig gyp cmake makeWrapper ]; buildInputs = [ qtbase qtimageformats gtk3 libappindicator-gtk3 diff --git a/pkgs/applications/networking/instant-messengers/telepathy/gabble/default.nix b/pkgs/applications/networking/instant-messengers/telepathy/gabble/default.nix index 77645371359b..1b9ccb98d0fa 100644 --- a/pkgs/applications/networking/instant-messengers/telepathy/gabble/default.nix +++ b/pkgs/applications/networking/instant-messengers/telepathy/gabble/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, libxslt, telepathy_glib, libxml2, dbus_glib, dbus_daemon +{ stdenv, fetchurl, pkgconfig, libxslt, telepathy-glib, libxml2, dbus-glib, dbus_daemon , sqlite, libsoup, libnice, gnutls}: stdenv.mkDerivation rec { @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig libxslt ]; - buildInputs = [ libxml2 dbus_glib sqlite libsoup libnice telepathy_glib gnutls telepathy_glib.python ] + buildInputs = [ libxml2 dbus-glib sqlite libsoup libnice telepathy-glib gnutls telepathy-glib.python ] ++ stdenv.lib.optional doCheck dbus_daemon; configureFlags = "--with-ca-certificates=/etc/ssl/certs/ca-certificates.crt"; diff --git a/pkgs/applications/networking/instant-messengers/telepathy/haze/default.nix b/pkgs/applications/networking/instant-messengers/telepathy/haze/default.nix index 4e4a2a9b6a96..a1669183bb3b 100644 --- a/pkgs/applications/networking/instant-messengers/telepathy/haze/default.nix +++ b/pkgs/applications/networking/instant-messengers/telepathy/haze/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, fetchpatch, pidgin, telepathy_glib, glib, dbus_glib, pkgconfig, libxslt }: +{ stdenv, fetchurl, fetchpatch, pidgin, telepathy-glib, glib, dbus-glib, pkgconfig, libxslt }: stdenv.mkDerivation rec { pname = "telepathy-haze"; @@ -9,7 +9,7 @@ stdenv.mkDerivation rec { sha256 = "1jgrp32p6rllj089ynbsk3n9xrvsvzmwzhf0ql05kkgj0nf08xiy"; }; - buildInputs = [ glib telepathy_glib dbus_glib pidgin telepathy_glib.python ]; + buildInputs = [ glib telepathy-glib dbus-glib pidgin telepathy-glib.python ]; nativeBuildInputs = [ pkgconfig libxslt ]; diff --git a/pkgs/applications/networking/instant-messengers/telepathy/idle/default.nix b/pkgs/applications/networking/instant-messengers/telepathy/idle/default.nix index b4fd71b01d44..7894554eee4f 100644 --- a/pkgs/applications/networking/instant-messengers/telepathy/idle/default.nix +++ b/pkgs/applications/networking/instant-messengers/telepathy/idle/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, glib, gnome3, pkgconfig, dbus_glib, telepathy_glib, libxslt, makeWrapper }: +{ stdenv, fetchurl, glib, gnome3, pkgconfig, dbus-glib, telepathy-glib, libxslt, makeWrapper }: stdenv.mkDerivation rec { pname = "telepathy-idle"; @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ glib telepathy_glib dbus_glib libxslt telepathy_glib.python (stdenv.lib.getLib gnome3.dconf) makeWrapper ]; + buildInputs = [ glib telepathy-glib dbus-glib libxslt telepathy-glib.python (stdenv.lib.getLib gnome3.dconf) makeWrapper ]; preFixup = '' wrapProgram "$out/libexec/telepathy-idle" \ diff --git a/pkgs/applications/networking/instant-messengers/telepathy/logger/default.nix b/pkgs/applications/networking/instant-messengers/telepathy/logger/default.nix index 9206aea5c542..111970ab7112 100644 --- a/pkgs/applications/networking/instant-messengers/telepathy/logger/default.nix +++ b/pkgs/applications/networking/instant-messengers/telepathy/logger/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, dbus_glib, libxml2, sqlite, telepathy_glib, pkgconfig +{ stdenv, fetchurl, dbus-glib, libxml2, sqlite, telepathy-glib, pkgconfig , gnome3, makeWrapper, intltool, libxslt, gobjectIntrospection, dbus_libs }: stdenv.mkDerivation rec { @@ -14,8 +14,8 @@ stdenv.mkDerivation rec { makeWrapper pkgconfig intltool libxslt gobjectIntrospection ]; buildInputs = [ - dbus_glib libxml2 sqlite telepathy_glib - dbus_libs telepathy_glib.python + dbus-glib libxml2 sqlite telepathy-glib + dbus_libs telepathy-glib.python ]; configureFlags = "--enable-call"; diff --git a/pkgs/applications/networking/instant-messengers/telepathy/mission-control/default.nix b/pkgs/applications/networking/instant-messengers/telepathy/mission-control/default.nix index 82485de58fc1..18b3bb06e98f 100644 --- a/pkgs/applications/networking/instant-messengers/telepathy/mission-control/default.nix +++ b/pkgs/applications/networking/instant-messengers/telepathy/mission-control/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, gnome3, telepathy_glib, libxslt, makeWrapper }: +{ stdenv, fetchurl, pkgconfig, gnome3, telepathy-glib, libxslt, makeWrapper }: stdenv.mkDerivation rec { name = "${pname}-5.16.4"; @@ -9,7 +9,7 @@ stdenv.mkDerivation rec { sha256 = "1jz6wwgsfxixha6ys2hbzbk5faqnj9kh2m5qdlgx5anqgandsscp"; }; - buildInputs = [ telepathy_glib telepathy_glib.python ]; # ToDo: optional stuff missing + buildInputs = [ telepathy-glib telepathy-glib.python ]; # ToDo: optional stuff missing nativeBuildInputs = [ pkgconfig libxslt makeWrapper ]; diff --git a/pkgs/applications/networking/instant-messengers/telepathy/salut/default.nix b/pkgs/applications/networking/instant-messengers/telepathy/salut/default.nix index cbae6af97b85..e060eaabf281 100644 --- a/pkgs/applications/networking/instant-messengers/telepathy/salut/default.nix +++ b/pkgs/applications/networking/instant-messengers/telepathy/salut/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, libxslt, glib, libxml2, telepathy_glib, avahi, libsoup +{ stdenv, fetchurl, libxslt, glib, libxml2, telepathy-glib, avahi, libsoup , libuuid, openssl, pcre, sqlite, pkgconfigUpstream }: stdenv.mkDerivation rec { @@ -11,8 +11,8 @@ stdenv.mkDerivation rec { }; # pcre needed because https://github.com/NixOS/nixpkgs/pull/15046 - buildInputs = [ glib libxml2 telepathy_glib avahi libsoup libuuid openssl - sqlite pcre telepathy_glib.python ]; + buildInputs = [ glib libxml2 telepathy-glib avahi libsoup libuuid openssl + sqlite pcre telepathy-glib.python ]; nativeBuildInputs = [ libxslt pkgconfigUpstream ]; diff --git a/pkgs/applications/networking/insync/default.nix b/pkgs/applications/networking/insync/default.nix index 93efdb74c083..cf3725c35e3d 100644 --- a/pkgs/applications/networking/insync/default.nix +++ b/pkgs/applications/networking/insync/default.nix @@ -2,12 +2,12 @@ stdenv.mkDerivation rec { name = "insync-${version}"; - version = "1.3.17.36167"; + version = "1.3.22.36179"; src = if stdenv.system == "x86_64-linux" then fetchurl { url = "http://s.insynchq.com/builds/insync-portable_${version}_amd64.tar.bz2"; - sha256 = "0mvg22psiy4x9g7k1fm9pigz2a70jmin7zg2nfzapfnqjlnrbw3n"; + sha256 = "0jmycpbmfvvpilcycyg6zgpjz6449bs17d2w4jx7m1rvzmpkk140"; } else throw "${name} is not supported on ${stdenv.system}"; diff --git a/pkgs/applications/networking/irc/hexchat/default.nix b/pkgs/applications/networking/irc/hexchat/default.nix index baa0b10fd756..b9860fa42273 100644 --- a/pkgs/applications/networking/irc/hexchat/default.nix +++ b/pkgs/applications/networking/irc/hexchat/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchFromGitHub, pkgconfig, gtk2, lua, perl, python2 -, libtool, pciutils, dbus_glib, libcanberra_gtk2, libproxy +, libtool, pciutils, dbus-glib, libcanberra-gtk2, libproxy , libsexy, enchant, libnotify, openssl, intltool -, desktop_file_utils, hicolor_icon_theme +, desktop-file-utils, hicolor-icon-theme , autoconf, automake, autoconf-archive }: @@ -22,8 +22,8 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - gtk2 lua perl python2 pciutils dbus_glib libcanberra_gtk2 libproxy - libsexy libnotify openssl desktop_file_utils hicolor_icon_theme + gtk2 lua perl python2 pciutils dbus-glib libcanberra-gtk2 libproxy + libsexy libnotify openssl desktop-file-utils hicolor-icon-theme ]; enableParallelBuilding = true; diff --git a/pkgs/applications/networking/irc/ii/default.nix b/pkgs/applications/networking/irc/ii/default.nix index 5e65c0dfeaf8..15f9def1151a 100644 --- a/pkgs/applications/networking/irc/ii/default.nix +++ b/pkgs/applications/networking/irc/ii/default.nix @@ -1,11 +1,11 @@ {stdenv, fetchurl}: stdenv.mkDerivation rec { - name = "ii-1.7"; + name = "ii-1.8"; src = fetchurl { url = "http://dl.suckless.org/tools/${name}.tar.gz"; - sha256 = "176cqwnn6h7w4kbfd66hzqa243l26pqp2b06bii0nmnm0rkaqwis"; + sha256 = "1lk8vjl7i8dcjh4jkg8h8bkapcbs465sy8g9c0chfqsywbmf3ndr"; }; installPhase = '' diff --git a/pkgs/applications/networking/jmeter/default.nix b/pkgs/applications/networking/jmeter/default.nix index a89898c37392..ec67321400dc 100644 --- a/pkgs/applications/networking/jmeter/default.nix +++ b/pkgs/applications/networking/jmeter/default.nix @@ -1,22 +1,50 @@ -{ fetchurl, stdenv, jre }: +{ fetchurl, stdenv, jre, makeWrapper, coreutils }: stdenv.mkDerivation rec { - name = "jmeter-3.3"; + name = "jmeter-${version}"; + version = "4.0"; src = fetchurl { url = "http://archive.apache.org/dist/jmeter/binaries/apache-${name}.tgz"; - sha256 = "190k6yrh5casadphkv4azp4nvf4wf2q85mrfysw67r9d96nb9kk5"; + sha256 = "1dvngvi6j8qb6nmf5a3gpi5wxck4xisj41qkrj8sjwb1f8jq6nw4"; }; - buildInputs = [ jre ]; + nativeBuildInputs = [ makeWrapper ]; installPhase = '' - substituteInPlace ./bin/jmeter.sh --replace "java $ARGS" "${jre}/bin/java $ARGS" - substituteInPlace ./bin/jmeter --replace "java $ARGS" "${jre}/bin/java $ARGS" mkdir $out - cp ./* $out/ -R + + rm bin/*.bat bin/*.cmd + + cp -R * $out/ + + substituteInPlace $out/bin/create-rmi-keystore.sh --replace \ + "keytool -genkey" \ + "${jre}/lib/openjdk/jre/bin/keytool -genkey" + + # Prefix some scripts with jmeter to avoid clobbering the namespace + for i in heapdump.sh mirror-server mirror-server.sh shutdown.sh stoptest.sh create-rmi-keystore.sh; do + mv $out/bin/$i $out/bin/jmeter-$i + wrapProgram $out/bin/jmeter-$i \ + --prefix PATH : "${jre}/bin" + done + + wrapProgram $out/bin/jmeter --set JAVA_HOME "${jre}" + wrapProgram $out/bin/jmeter.sh --set JAVA_HOME "${jre}" ''; - meta = { + doInstallCheck = true; + + checkInputs = [ coreutils ]; + + installCheckPhase = '' + $out/bin/jmeter --version 2>&1 | grep -q "${version}" + $out/bin/jmeter-heapdump.sh > /dev/null + $out/bin/jmeter-shutdown.sh > /dev/null + $out/bin/jmeter-stoptest.sh > /dev/null + timeout --kill=1s 1s $out/bin/jmeter-mirror-server.sh || test "$?" = "124" + ''; + + meta = with stdenv.lib; { description = "A 100% pure Java desktop application designed to load test functional behavior and measure performance"; longDescription = '' The Apache JMeter desktop application is open source software, a 100% @@ -24,9 +52,9 @@ stdenv.mkDerivation rec { measure performance. It was originally designed for testing Web Applications but has since expanded to other test functions. ''; - license = stdenv.lib.licenses.asl20; - maintainers = [ stdenv.lib.maintainers.garbas ]; + license = licenses.asl20; + maintainers = [ maintainers.garbas ]; priority = 1; - platforms = stdenv.lib.platforms.unix; + platforms = platforms.unix; }; } diff --git a/pkgs/applications/networking/mailreaders/astroid/default.nix b/pkgs/applications/networking/mailreaders/astroid/default.nix index 0324012b278b..610b16dab5bc 100644 --- a/pkgs/applications/networking/mailreaders/astroid/default.nix +++ b/pkgs/applications/networking/mailreaders/astroid/default.nix @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ scons pkgconfig wrapGAppsHook ]; buildInputs = [ gnome3.gtkmm gmime3 webkitgtk24x-gtk3 libsass gnome3.libpeas - notmuch boost gnome3.gsettings_desktop_schemas ]; + notmuch boost gnome3.gsettings-desktop-schemas ]; buildPhase = "scons --propagate-environment --prefix=$out build"; installPhase = "scons --propagate-environment --prefix=$out install"; diff --git a/pkgs/applications/networking/mailreaders/claws-mail/default.nix b/pkgs/applications/networking/mailreaders/claws-mail/default.nix index aee4d8ca04e6..b2a26bb6f0be 100644 --- a/pkgs/applications/networking/mailreaders/claws-mail/default.nix +++ b/pkgs/applications/networking/mailreaders/claws-mail/default.nix @@ -1,8 +1,8 @@ { fetchurl, stdenv, wrapGAppsHook -, curl, dbus, dbus_glib, enchant, gtk2, gnutls, gnupg, gpgme, hicolor_icon_theme -, libarchive, libcanberra_gtk2, libetpan, libnotify, libsoup, libxml2, networkmanager -, openldap , perl, pkgconfig, poppler, python, shared_mime_info, webkitgtk24x-gtk2 -, glib_networking, gsettings_desktop_schemas, libSM, libytnef +, curl, dbus, dbus-glib, enchant, gtk2, gnutls, gnupg, gpgme, hicolor-icon-theme +, libarchive, libcanberra-gtk2, libetpan, libnotify, libsoup, libxml2, networkmanager +, openldap , perl, pkgconfig, poppler, python, shared-mime-info, webkitgtk24x-gtk2 +, glib-networking, gsettings-desktop-schemas, libSM, libytnef # Build options # TODO: A flag to build the manual. @@ -45,19 +45,19 @@ stdenv.mkDerivation rec { postPatch = '' substituteInPlace src/procmime.c \ - --subst-var-by MIMEROOTDIR ${shared_mime_info}/share + --subst-var-by MIMEROOTDIR ${shared-mime-info}/share ''; nativeBuildInputs = [ pkgconfig wrapGAppsHook ]; buildInputs = - [ curl dbus dbus_glib gtk2 gnutls gsettings_desktop_schemas hicolor_icon_theme - libetpan perl python glib_networking libSM libytnef + [ curl dbus dbus-glib gtk2 gnutls gsettings-desktop-schemas hicolor-icon-theme + libetpan perl python glib-networking libSM libytnef ] ++ optional enableSpellcheck enchant ++ optionals (enablePgp || enablePluginSmime) [ gnupg gpgme ] ++ optional enablePluginArchive libarchive - ++ optional enablePluginNotificationSounds libcanberra_gtk2 + ++ optional enablePluginNotificationSounds libcanberra-gtk2 ++ optional enablePluginNotificationDialogs libnotify ++ optional enablePluginFancy libsoup ++ optional enablePluginRssyl libxml2 @@ -88,7 +88,7 @@ stdenv.mkDerivation rec { enableParallelBuilding = true; preFixup = '' - gappsWrapperArgs+=(--prefix XDG_DATA_DIRS : "${shared_mime_info}/share") + gappsWrapperArgs+=(--prefix XDG_DATA_DIRS : "${shared-mime-info}/share") ''; postInstall = '' diff --git a/pkgs/applications/networking/mailreaders/inboxer/default.nix b/pkgs/applications/networking/mailreaders/inboxer/default.nix index ef66f69f979a..a71db1cf7151 100644 --- a/pkgs/applications/networking/mailreaders/inboxer/default.nix +++ b/pkgs/applications/networking/mailreaders/inboxer/default.nix @@ -2,7 +2,7 @@ stdenv.mkDerivation rec { name = "inboxer-${version}"; - version = "1.0.0"; + version = "1.0.2"; meta = with stdenv.lib; { description = "Unofficial, free and open-source Google Inbox Desktop App"; @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "https://github.com/denysdovhan/inboxer/releases/download/v${version}/inboxer_${version}_amd64.deb"; - sha256 = "01384fi5vrfqpznk9389nf3bwpi2zjbnkg84g6z1css8f3gp5i1c"; + sha256 = "0nqgsqxsjnj46wsfb60p7fr631yx3fx7dfa4fpj6x2ml4i42kxid"; }; unpackPhase = '' diff --git a/pkgs/applications/networking/mailreaders/mailnag/default.nix b/pkgs/applications/networking/mailreaders/mailnag/default.nix index b1ca80fc7e47..75f34952394e 100644 --- a/pkgs/applications/networking/mailreaders/mailnag/default.nix +++ b/pkgs/applications/networking/mailreaders/mailnag/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, gettext, gtk3, pythonPackages , gdk_pixbuf, libnotify, gst_all_1 -, libgnome_keyring3, networkmanager +, libgnome-keyring3, networkmanager , wrapGAppsHook, gnome3 # otherwise passwords are stored unencrypted , withGnomeKeyring ? true @@ -22,7 +22,7 @@ in pythonPackages.buildPythonApplication rec { gst_all_1.gst-plugins-base gst_all_1.gst-plugins-good gst_all_1.gst-plugins-bad gnome3.defaultIconTheme - ] ++ stdenv.lib.optional withGnomeKeyring libgnome_keyring3; + ] ++ stdenv.lib.optional withGnomeKeyring libgnome-keyring3; nativeBuildInputs = [ wrapGAppsHook diff --git a/pkgs/applications/networking/mailreaders/neomutt/default.nix b/pkgs/applications/networking/mailreaders/neomutt/default.nix index 6413c1407dc1..ea7e7ee282d1 100644 --- a/pkgs/applications/networking/mailreaders/neomutt/default.nix +++ b/pkgs/applications/networking/mailreaders/neomutt/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub, gettext, makeWrapper, tcl, which, writeScript -, ncurses, perl , cyrus_sasl, gss, gpgme, kerberos, libidn, notmuch, openssl +, ncurses, perl , cyrus_sasl, gss, gpgme, kerberos, libidn, libxml2, notmuch, openssl , lmdb, libxslt, docbook_xsl, docbook_xml_dtd_42, mime-types }: let @@ -15,14 +15,14 @@ let ''; in stdenv.mkDerivation rec { - version = "20171215"; + version = "20180223"; name = "neomutt-${version}"; src = fetchFromGitHub { owner = "neomutt"; repo = "neomutt"; rev = "neomutt-${version}"; - sha256 = "1c7vjl5cl0k41vrxp6l1sj72idz70r2rgaxa2m1yir6zb6qsrsd8"; + sha256 = "1q0zwm8p2mk85icrbq42z4235mpqfra38pigd064kharx54k36sb"; }; buildInputs = [ @@ -32,12 +32,15 @@ in stdenv.mkDerivation rec { ]; nativeBuildInputs = [ - docbook_xsl docbook_xml_dtd_42 gettext libxslt.bin makeWrapper tcl which + docbook_xsl docbook_xml_dtd_42 gettext libxml2 libxslt.bin makeWrapper tcl which ]; enableParallelBuilding = true; postPatch = '' + substituteInPlace contrib/smime_keys \ + --replace /usr/bin/openssl ${openssl}/bin/openssl + for f in doc/*.{xml,xsl}* ; do substituteInPlace $f \ --replace http://docbook.sourceforge.net/release/xsl/current ${docbook_xsl}/share/xml/docbook-xsl \ @@ -48,6 +51,12 @@ in stdenv.mkDerivation rec { # and use a far more comprehensive list than the one shipped with neomutt substituteInPlace sendlib.c \ --replace /etc/mime.types ${mime-types}/etc/mime.types + + # The string conversion tests all fail with the first version of neomutt + # that has tests (20180223) so we disable them for now. + # I don't know if that is related to the tests or our build environment. + # Try again with a later release. + sed -i '/rfc2047/d' test/Makefile.autosetup test/main.c ''; configureFlags = [ @@ -73,6 +82,10 @@ in stdenv.mkDerivation rec { wrapProgram "$out/bin/neomutt" --prefix PATH : "$out/lib/neomutt" ''; + doCheck = true; + + checkTarget = "test"; + meta = with stdenv.lib; { description = "A small but very powerful text-based mail client"; homepage = http://www.neomutt.org; diff --git a/pkgs/applications/networking/mailreaders/notmuch/default.nix b/pkgs/applications/networking/mailreaders/notmuch/default.nix index c23c264559f8..a3de728ce415 100644 --- a/pkgs/applications/networking/mailreaders/notmuch/default.nix +++ b/pkgs/applications/networking/mailreaders/notmuch/default.nix @@ -54,6 +54,10 @@ stdenv.mkDerivation rec { done ''; + # Notmuch doesn't use autoconf and consequently doesn't tag --bindir and + # friends + setOutputFlags = false; + enableParallelBuilding = true; makeFlags = "V=1"; preFixup = optionalString stdenv.isDarwin '' diff --git a/pkgs/applications/networking/mailreaders/nylas-mail-bin/default.nix b/pkgs/applications/networking/mailreaders/nylas-mail-bin/default.nix index 76231dc7abf2..766aab39ce30 100644 --- a/pkgs/applications/networking/mailreaders/nylas-mail-bin/default.nix +++ b/pkgs/applications/networking/mailreaders/nylas-mail-bin/default.nix @@ -5,7 +5,7 @@ , coreutils , cups , dbus -, desktop_file_utils +, desktop-file-utils , expat , fontconfig , freetype @@ -14,7 +14,7 @@ , glib , gnome2 , libgcrypt -, libgnome_keyring +, libgnome-keyring , libnotify , makeWrapper , nodejs @@ -49,7 +49,7 @@ stdenv.mkDerivation rec { coreutils cups dbus - desktop_file_utils + desktop-file-utils expat fontconfig freetype @@ -58,7 +58,7 @@ stdenv.mkDerivation rec { glib gnome2.GConf gnome2.gtk - libgnome_keyring + libgnome-keyring libnotify nodejs nspr @@ -82,7 +82,7 @@ stdenv.mkDerivation rec { ]; - buildInputs = [ gnome2.gnome_keyring ]; + buildInputs = [ gnome2.gnome-keyring ]; nativeBuildInputs = [ makeWrapper ]; @@ -111,7 +111,7 @@ stdenv.mkDerivation rec { --set-rpath $binrp:$out/lib:${stdenv.cc.cc.lib}/lib:${lib.makeLibraryPath propagatedBuildInputs } \ $out/share/nylas-mail/nylas - wrapProgram $out/share/nylas-mail/nylas --set LD_LIBRARY_PATH "${xorg.libxkbfile}/lib:${pkgs.gnome3.libgnome_keyring}/lib"; + wrapProgram $out/share/nylas-mail/nylas --set LD_LIBRARY_PATH "${xorg.libxkbfile}/lib:${pkgs.gnome3.libgnome-keyring}/lib"; # Fix path to bash so apm can install plugins. substituteInPlace $out/share/nylas-mail/resources/apm/bin/apm \ diff --git a/pkgs/applications/networking/mailreaders/thunderbird-bin/default.nix b/pkgs/applications/networking/mailreaders/thunderbird-bin/default.nix index 4f714cabf79b..69a63bbb0549 100644 --- a/pkgs/applications/networking/mailreaders/thunderbird-bin/default.nix +++ b/pkgs/applications/networking/mailreaders/thunderbird-bin/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, config, makeWrapper , gconf , alsaLib -, at_spi2_atk +, at-spi2-atk , atk , cairo , cups , curl -, dbus_glib +, dbus-glib , dbus_libs , fontconfig , freetype @@ -27,7 +27,7 @@ , libXinerama , libXrender , libXt -, libcanberra_gtk2 +, libcanberra-gtk2 , libgnome , libgnomeui , defaultIconTheme @@ -82,12 +82,12 @@ stdenv.mkDerivation { [ stdenv.cc.cc gconf alsaLib - at_spi2_atk + at-spi2-atk atk cairo cups curl - dbus_glib + dbus-glib dbus_libs fontconfig freetype @@ -108,7 +108,7 @@ stdenv.mkDerivation { libXinerama libXrender libXt - libcanberra_gtk2 + libcanberra-gtk2 libgnome libgnomeui mesa diff --git a/pkgs/applications/networking/mailreaders/thunderbird/default.nix b/pkgs/applications/networking/mailreaders/thunderbird/default.nix index bfbd97001973..6368f1991e91 100644 --- a/pkgs/applications/networking/mailreaders/thunderbird/default.nix +++ b/pkgs/applications/networking/mailreaders/thunderbird/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, pkgconfig, gtk2, pango, perl, python, zip, libIDL -, libjpeg, zlib, dbus, dbus_glib, bzip2, xorg +, libjpeg, zlib, dbus, dbus-glib, bzip2, xorg , freetype, fontconfig, file, nspr, nss, libnotify , yasm, mesa, sqlite, unzip , hunspell, libevent, libstartup_notification @@ -39,7 +39,7 @@ in stdenv.mkDerivation rec { # from firefox, but without sound libraries buildInputs = [ gtk2 zip libIDL libjpeg zlib bzip2 - dbus dbus_glib pango freetype fontconfig xorg.libXi + dbus dbus-glib pango freetype fontconfig xorg.libXi xorg.libX11 xorg.libXrender xorg.libXft xorg.libXt file nspr nss libnotify xorg.pixman yasm mesa xorg.libXScrnSaver xorg.scrnsaverproto diff --git a/pkgs/applications/networking/newsreaders/liferea/default.nix b/pkgs/applications/networking/newsreaders/liferea/default.nix index ed6fe17cc7e8..965a8ec58dc8 100644 --- a/pkgs/applications/networking/newsreaders/liferea/default.nix +++ b/pkgs/applications/networking/newsreaders/liferea/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, pkgconfig, intltool, python3Packages, wrapGAppsHook -, glib, libxml2, libxslt, sqlite, libsoup , webkitgtk, json_glib, gst_all_1 -, libnotify, gtk3, gsettings_desktop_schemas, libpeas, dconf, librsvg -, gobjectIntrospection, glib_networking +, glib, libxml2, libxslt, sqlite, libsoup , webkitgtk, json-glib, gst_all_1 +, libnotify, gtk3, gsettings-desktop-schemas, libpeas, dconf, librsvg +, gobjectIntrospection, glib-networking }: let @@ -18,9 +18,9 @@ in stdenv.mkDerivation rec { nativeBuildInputs = [ wrapGAppsHook python3Packages.wrapPython intltool pkgconfig ]; buildInputs = [ - glib gtk3 webkitgtk libxml2 libxslt sqlite libsoup gsettings_desktop_schemas - libpeas gsettings_desktop_schemas json_glib dconf gobjectIntrospection - librsvg glib_networking libnotify + glib gtk3 webkitgtk libxml2 libxslt sqlite libsoup gsettings-desktop-schemas + libpeas gsettings-desktop-schemas json-glib dconf gobjectIntrospection + librsvg glib-networking libnotify ] ++ (with gst_all_1; [ gstreamer gst-plugins-base gst-plugins-good gst-plugins-bad ]); diff --git a/pkgs/applications/networking/newsreaders/pan/default.nix b/pkgs/applications/networking/newsreaders/pan/default.nix index 63d7f29d7de6..ad35c49c0146 100644 --- a/pkgs/applications/networking/newsreaders/pan/default.nix +++ b/pkgs/applications/networking/newsreaders/pan/default.nix @@ -1,6 +1,6 @@ { spellChecking ? true , stdenv, fetchurl, pkgconfig, gtk2, gtkspell2 ? null -, perl, pcre, gmime, gettext, intltool, dbus_glib, libnotify +, perl, pcre, gmime, gettext, intltool, dbus-glib, libnotify }: assert spellChecking -> gtkspell2 != null; @@ -16,7 +16,7 @@ stdenv.mkDerivation { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ gtk2 perl gmime gettext intltool dbus_glib libnotify ] + buildInputs = [ gtk2 perl gmime gettext intltool dbus-glib libnotify ] ++ stdenv.lib.optional spellChecking gtkspell2; enableParallelBuilding = true; diff --git a/pkgs/applications/networking/nextcloud-client/default.nix b/pkgs/applications/networking/nextcloud-client/default.nix index 3cbc03e8d73c..f61b887cd873 100644 --- a/pkgs/applications/networking/nextcloud-client/default.nix +++ b/pkgs/applications/networking/nextcloud-client/default.nix @@ -1,14 +1,14 @@ { stdenv, fetchgit, cmake, pkgconfig, qtbase, qtwebkit, qtkeychain, qttools, sqlite -, inotify-tools, withGnomeKeyring ? false, makeWrapper, libgnome_keyring }: +, inotify-tools, withGnomeKeyring ? false, makeWrapper, libgnome-keyring }: stdenv.mkDerivation rec { name = "nextcloud-client-${version}"; - version = "2.3.2"; + version = "2.3.3"; src = fetchgit { url = "git://github.com/nextcloud/client_theming.git"; - rev = "1ee750d1aeaaefc899629e85c311594603e9ac1b"; - sha256 = "0dxyng8a7cg78z8yngiqypsb44lf5c6vkabvkfch0cl0cqmarc1a"; + rev = "ab40efe1e1475efddd636c09251d8917627261da"; + sha256 = "19a1kqydgx47sa1a917j46zlbc5g9nynsanasyad9c8sqi0qvyip"; fetchSubmodules = true; }; @@ -41,7 +41,7 @@ stdenv.mkDerivation rec { $out/share/applications/nextcloud.desktop '' + stdenv.lib.optionalString (withGnomeKeyring) '' wrapProgram "$out/bin/nextcloud" \ - --prefix LD_LIBRARY_PATH : ${stdenv.lib.makeLibraryPath [ libgnome_keyring ]} + --prefix LD_LIBRARY_PATH : ${stdenv.lib.makeLibraryPath [ libgnome-keyring ]} ''; meta = with stdenv.lib; { diff --git a/pkgs/applications/networking/p2p/qbittorrent/default.nix b/pkgs/applications/networking/p2p/qbittorrent/default.nix index 59c48c0a3d3a..90d68a96e5c0 100644 --- a/pkgs/applications/networking/p2p/qbittorrent/default.nix +++ b/pkgs/applications/networking/p2p/qbittorrent/default.nix @@ -10,11 +10,11 @@ with stdenv.lib; stdenv.mkDerivation rec { name = "qbittorrent-${version}"; - version = "4.0.3"; + version = "4.0.4"; src = fetchurl { url = "mirror://sourceforge/qbittorrent/${name}.tar.xz"; - sha256 = "1lkbrvpzdfbqwilj09a9vraai7pz6dh999w4vl51mj1adm7bh0ws"; + sha256 = "13sw0sdw2agm49plp9xvkg6wva274drpvgz76dqj4j2kfxx9s2jk"; }; nativeBuildInputs = [ pkgconfig which ]; diff --git a/pkgs/applications/networking/p2p/retroshare/default.nix b/pkgs/applications/networking/p2p/retroshare/default.nix index 0d7a41735ea4..950187ed9c60 100644 --- a/pkgs/applications/networking/p2p/retroshare/default.nix +++ b/pkgs/applications/networking/p2p/retroshare/default.nix @@ -23,7 +23,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig qmake ]; buildInputs = [ - speex libupnp gpgme gnome3.libgnome_keyring glib libssh qtmultimedia qtx11extras qttools + speex libupnp gpgme gnome3.libgnome-keyring glib libssh qtmultimedia qtx11extras qttools protobuf bzip2 libXScrnSaver curl libxml2 libxslt sqlcipher libmicrohttpd opencv ffmpeg ]; diff --git a/pkgs/applications/networking/p2p/tixati/default.nix b/pkgs/applications/networking/p2p/tixati/default.nix index d37f5293ef80..688f908c798c 100644 --- a/pkgs/applications/networking/p2p/tixati/default.nix +++ b/pkgs/applications/networking/p2p/tixati/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, glib, zlib, dbus, dbus_glib, gtk2, gdk_pixbuf, cairo, pango }: +{ stdenv, fetchurl, glib, zlib, dbus, dbus-glib, gtk2, gdk_pixbuf, cairo, pango }: stdenv.mkDerivation rec { name = "tixati-${version}"; @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { installPhase = '' patchelf --set-interpreter "$(cat $NIX_CC/nix-support/dynamic-linker)" \ - --set-rpath ${stdenv.lib.makeLibraryPath [ glib zlib dbus dbus_glib gtk2 gdk_pixbuf cairo pango ]} \ + --set-rpath ${stdenv.lib.makeLibraryPath [ glib zlib dbus dbus-glib gtk2 gdk_pixbuf cairo pango ]} \ tixati install -D tixati $out/bin/tixati install -D tixati.desktop $out/share/applications/tixati.desktop diff --git a/pkgs/applications/networking/p2p/transmission-remote-gtk/default.nix b/pkgs/applications/networking/p2p/transmission-remote-gtk/default.nix index 20c3540b7f45..eb88d1c24c20 100644 --- a/pkgs/applications/networking/p2p/transmission-remote-gtk/default.nix +++ b/pkgs/applications/networking/p2p/transmission-remote-gtk/default.nix @@ -1,6 +1,6 @@ { stdenv, autoconf, automake, libtool, wrapGAppsHook, fetchFromGitHub, pkgconfig -, intltool, gtk3, json_glib, curl, glib, autoconf-archive, appstream-glib -, hicolor_icon_theme }: +, intltool, gtk3, json-glib, curl, glib, autoconf-archive, appstream-glib +, hicolor-icon-theme }: stdenv.mkDerivation rec { @@ -21,7 +21,7 @@ stdenv.mkDerivation rec { pkgconfig intltool autoconf-archive appstream-glib ]; - buildInputs = [ gtk3 json_glib curl glib hicolor_icon_theme ]; + buildInputs = [ gtk3 json-glib curl glib hicolor-icon-theme ]; meta = with stdenv.lib; { description = "GTK remote control for the Transmission BitTorrent client"; diff --git a/pkgs/applications/networking/p2p/transmission/default.nix b/pkgs/applications/networking/p2p/transmission/default.nix index 3c5fb499a8bd..cf825b724962 100644 --- a/pkgs/applications/networking/p2p/transmission/default.nix +++ b/pkgs/applications/networking/p2p/transmission/default.nix @@ -6,18 +6,15 @@ , enableCli ? true }: -let - version = "2.92"; -in - let inherit (stdenv.lib) optional optionals optionalString; in stdenv.mkDerivation rec { name = "transmission-" + optionalString enableGTK3 "gtk-" + version; + version = "2.93"; src = fetchurl { - url = "https://transmission.cachefly.net/transmission-${version}.tar.xz"; - sha256 = "0pykmhi7pdmzq47glbj8i2im6iarp4wnj4l1pyvsrnba61f0939s"; + url = "https://github.com/transmission/transmission-releases/raw/master/transmission-2.93.tar.xz"; + sha256 = "8815920e0a4499bcdadbbe89a4115092dab42ce5199f71ff9a926cfd12b9b90b"; }; nativeBuildInputs = [ pkgconfig ] @@ -27,16 +24,6 @@ stdenv.mkDerivation rec { ++ optionals enableSystemd [ systemd ] ++ optionals stdenv.isLinux [ inotify-tools ]; - patches = [ - (fetchpatch { - # See https://github.com/transmission/transmission/pull/468 - # Patch from: https://github.com/transmission/transmission/pull/468#issuecomment-357098126 - name = "transmission-fix-dns-rebinding-vuln.patch"; - url = https://github.com/transmission/transmission/files/1624507/transmission-fix-dns-rebinding-vuln.patch.txt; - sha256 = "1p9m20kp4kdyp5jjr3yp5px627n8cfa29mg5n3wzsdfv0qzk9gy4"; - }) - ]; - postPatch = '' substituteInPlace ./configure \ --replace "libsystemd-daemon" "libsystemd" \ diff --git a/pkgs/applications/networking/p2p/tribler/default.nix b/pkgs/applications/networking/p2p/tribler/default.nix index d8e0c76dc490..f6828fe6f317 100644 --- a/pkgs/applications/networking/p2p/tribler/default.nix +++ b/pkgs/applications/networking/p2p/tribler/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { pname = "tribler"; name = "${pname}-${version}"; - version = "7.0.0-rc3"; + version = "7.0.1"; src = fetchurl { url = "https://github.com/Tribler/tribler/releases/download/v${version}/Tribler-v${version}.tar.xz"; - sha256 = "0f1f8mzbk1ygkh8lv9y1s9mvslv12d94mxvmp3b4s2vm8w4syza7"; + sha256 = "0cqg6319x2lid5la5vdlj6lwja8g712196j39jzv5yiaq8d0zym4"; }; buildInputs = [ diff --git a/pkgs/applications/networking/pjsip/default.nix b/pkgs/applications/networking/pjsip/default.nix index b43287230278..2a4991b9318f 100644 --- a/pkgs/applications/networking/pjsip/default.nix +++ b/pkgs/applications/networking/pjsip/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "pjsip-${version}"; - version = "2.7.1"; + version = "2.7.2"; src = fetchurl { url = "http://www.pjsip.org/release/${version}/pjproject-${version}.tar.bz2"; - sha256 = "09ii5hgl5s7grx4fiimcl3s77i385h7b3kwpfa2q0arbl1ibryjr"; + sha256 = "0wiph6g51wanzwjjrpwsz63amgvly8g08jz033gnwqmppa584b4w"; }; buildInputs = [ openssl libsamplerate alsaLib ]; diff --git a/pkgs/applications/networking/remote/citrix-receiver/default.nix b/pkgs/applications/networking/remote/citrix-receiver/default.nix index 6f87e55e8ea3..00332754c264 100644 --- a/pkgs/applications/networking/remote/citrix-receiver/default.nix +++ b/pkgs/applications/networking/remote/citrix-receiver/default.nix @@ -169,7 +169,7 @@ let ./${prefixWithBitness}/hinst # Run the installer... - ./${prefixWithBitness}/hinst CDROM "`pwd`" + bash ./${prefixWithBitness}/hinst CDROM "`pwd`" echo "Deleting broken links..." for link in `find $ICAInstDir -type l ` @@ -202,7 +202,7 @@ let makeWrapper "$ICAInstDir/wfica" "$out/bin/wfica" \ --add-flags "-icaroot $ICAInstDir" \ --set ICAROOT "$ICAInstDir" \ - --set GTK_PATH "${gtk2.out}/lib/gtk-2.0:${gnome3.gnome_themes_standard}/lib/gtk-2.0" \ + --set GTK_PATH "${gtk2.out}/lib/gtk-2.0:${gnome3.gnome-themes-standard}/lib/gtk-2.0" \ --set GDK_PIXBUF_MODULE_FILE "$GDK_PIXBUF_MODULE_FILE" \ --set LD_PRELOAD "${libredirect}/lib/libredirect.so" \ --set LD_LIBRARY_PATH "$libPath" \ diff --git a/pkgs/applications/networking/remote/remmina/default.nix b/pkgs/applications/networking/remote/remmina/default.nix index 959608b04f5c..6d32036def55 100644 --- a/pkgs/applications/networking/remote/remmina/default.nix +++ b/pkgs/applications/networking/remote/remmina/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchFromGitHub, cmake, pkgconfig, wrapGAppsHook -, glib, gtk3, gettext, libxkbfile, libgnome_keyring, libX11 +, glib, gtk3, gettext, libxkbfile, libgnome-keyring, libX11 , freerdp, libssh, libgcrypt, gnutls, makeDesktopItem , pcre, webkitgtk, libdbusmenu-gtk3, libappindicator-gtk3 , libvncserver, libpthreadstubs, libXdmcp, libxkbcommon -, libsecret, spice_protocol, spice_gtk, epoxy, at_spi2_core -, openssl, gsettings_desktop_schemas +, libsecret, spice-protocol, spice-gtk, epoxy, at-spi2-core +, openssl, gsettings-desktop-schemas # The themes here are soft dependencies; only icons are missing without them. -, hicolor_icon_theme, adwaita-icon-theme +, hicolor-icon-theme, adwaita-icon-theme }: let @@ -33,13 +33,13 @@ in stdenv.mkDerivation { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ cmake wrapGAppsHook gsettings_desktop_schemas - glib gtk3 gettext libxkbfile libgnome_keyring libX11 + buildInputs = [ cmake wrapGAppsHook gsettings-desktop-schemas + glib gtk3 gettext libxkbfile libgnome-keyring libX11 freerdp libssh libgcrypt gnutls pcre webkitgtk libdbusmenu-gtk3 libappindicator-gtk3 libvncserver libpthreadstubs libXdmcp libxkbcommon - libsecret spice_protocol spice_gtk epoxy at_spi2_core - openssl hicolor_icon_theme adwaita-icon-theme ]; + libsecret spice-protocol spice-gtk epoxy at-spi2-core + openssl hicolor-icon-theme adwaita-icon-theme ]; cmakeFlags = [ "-DWITH_VTE=OFF" diff --git a/pkgs/applications/networking/seafile-client/default.nix b/pkgs/applications/networking/seafile-client/default.nix index 74f5ecb6b75f..e47a6ba6be3d 100644 --- a/pkgs/applications/networking/seafile-client/default.nix +++ b/pkgs/applications/networking/seafile-client/default.nix @@ -1,16 +1,18 @@ -{ stdenv, fetchurl, writeScript, pkgconfig, cmake, qtbase, qttools +{ stdenv, fetchFromGitHub, writeScript, pkgconfig, cmake, qtbase, qttools , seafile-shared, ccnet, makeWrapper , withShibboleth ? true, qtwebengine }: with stdenv.lib; stdenv.mkDerivation rec { - version = "6.1.0"; + version = "6.1.5"; name = "seafile-client-${version}"; - src = fetchurl { - url = "https://github.com/haiwen/seafile-client/archive/v${version}.tar.gz"; - sha256 = "16rn6b9ayaccgwx8hs3yh1wb395pp8ffh8may8a8bpcc4gdry7bd"; + src = fetchFromGitHub { + owner = "haiwen"; + repo = "seafile-client"; + rev = "v${version}"; + sha256 = "1ahz55cw2p3s78x5f77drz4h2jhknfzpkk83qd0ggma31q1pnpl9"; }; nativeBuildInputs = [ pkgconfig cmake makeWrapper ]; diff --git a/pkgs/applications/networking/sniffers/wireshark/default.nix b/pkgs/applications/networking/sniffers/wireshark/default.nix index 84e10fb18bca..682b7d311d71 100644 --- a/pkgs/applications/networking/sniffers/wireshark/default.nix +++ b/pkgs/applications/networking/sniffers/wireshark/default.nix @@ -1,7 +1,7 @@ { stdenv, lib, fetchurl, pkgconfig, pcre, perl, flex, bison, gettext, libpcap, libnl, c-ares , gnutls, libgcrypt, libgpgerror, geoip, openssl, lua5, makeDesktopItem, python, libcap, glib , libssh, zlib, cmake, extra-cmake-modules, fetchpatch -, withGtk ? false, gtk3 ? null, librsvg ? null, gsettings_desktop_schemas ? null, wrapGAppsHook ? null +, withGtk ? false, gtk3 ? null, librsvg ? null, gsettings-desktop-schemas ? null, wrapGAppsHook ? null , withQt ? false, qt5 ? null , ApplicationServices, SystemConfiguration, gmp }: @@ -36,7 +36,7 @@ in stdenv.mkDerivation { gettext pcre perl libpcap lua5 libssh openssl libgcrypt libgpgerror gnutls geoip c-ares python glib zlib ] ++ optionals withQt (with qt5; [ qtbase qtmultimedia qtsvg qttools ]) - ++ optionals withGtk [ gtk3 librsvg gsettings_desktop_schemas ] + ++ optionals withGtk [ gtk3 librsvg gsettings-desktop-schemas ] ++ optionals stdenv.isLinux [ libcap libnl ] ++ optionals stdenv.isDarwin [ SystemConfiguration ApplicationServices gmp ]; diff --git a/pkgs/applications/networking/sync/lsyncd/default.nix b/pkgs/applications/networking/sync/lsyncd/default.nix index a7cf26ea7aea..e4bdec668a02 100644 --- a/pkgs/applications/networking/sync/lsyncd/default.nix +++ b/pkgs/applications/networking/sync/lsyncd/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { name = "lsyncd-${version}"; - version = "2.1.6"; + version = "2.2.2"; src = fetchFromGitHub { owner = "axkibe"; repo = "lsyncd"; rev = "release-${version}"; - sha256 = "1cab96h4qfyapk7lb682j1d8k0hpv7h9pl41vdgc0vr4bq4c3ij2"; + sha256 = "1q2ixp52r96ckghgmxdbms6xrq8dbziimp8gmgzqfq4lk1v1w80y"; }; patchPhase = '' diff --git a/pkgs/applications/networking/syncthing-gtk/default.nix b/pkgs/applications/networking/syncthing-gtk/default.nix index 5e4f9738d445..5e48f85852df 100644 --- a/pkgs/applications/networking/syncthing-gtk/default.nix +++ b/pkgs/applications/networking/syncthing-gtk/default.nix @@ -21,7 +21,7 @@ buildPythonApplication rec { gtk3 (librsvg.override { enableIntrospection = true; }) libnotify # Schemas with proxy configuration - gnome3.gsettings_desktop_schemas + gnome3.gsettings-desktop-schemas ]; propagatedBuildInputs = [ diff --git a/pkgs/applications/networking/syncthing/inotify-deps.nix b/pkgs/applications/networking/syncthing/inotify-deps.nix deleted file mode 100644 index e5e554db67b8..000000000000 --- a/pkgs/applications/networking/syncthing/inotify-deps.nix +++ /dev/null @@ -1,21 +0,0 @@ -# This file was generated by https://github.com/kamilchm/go2nix v1.2.0 -[ - { - goPackagePath = "github.com/syncthing/syncthing"; - fetch = { - type = "git"; - url = "https://github.com/syncthing/syncthing"; - rev = "d0061c172caecd3baf61f3ff720f56fdb805186e"; - sha256 = "08cn0ym4arjppbnfn2b37crarwmiqbj4yjr7kinhdxx9gqm5wkj1"; - }; - } - { - goPackagePath = "golang.org/x/sys"; - fetch = { - type = "git"; - url = "https://go.googlesource.com/sys"; - rev = "fb4cac33e3196ff7f507ab9b2d2a44b0142f5b5a"; - sha256 = "1y5lx3f7rawfxrqg0s2ndgbjjjaml3rn3f27h9w9c5mw3xk7lrgj"; - }; - } -] diff --git a/pkgs/applications/networking/syncthing/inotify.nix b/pkgs/applications/networking/syncthing/inotify.nix deleted file mode 100644 index e33501a17158..000000000000 --- a/pkgs/applications/networking/syncthing/inotify.nix +++ /dev/null @@ -1,37 +0,0 @@ -{ stdenv, buildGoPackage, fetchFromGitHub }: - -buildGoPackage rec { - name = "syncthing-inotify-${version}"; - version = "0.8.6"; - - goPackagePath = "github.com/syncthing/syncthing-inotify"; - - src = fetchFromGitHub { - owner = "syncthing"; - repo = "syncthing-inotify"; - rev = "v${version}"; - sha256 = "0z1zpb7av4q5nj2d4yda9jcbjdz4yj3823c29y73yf0gfp26lppl"; - }; - - goDeps = ./inotify-deps.nix; - - postInstall = '' - mkdir -p $bin/lib/systemd/{system,user} - - substitute $src/etc/linux-systemd/system/syncthing-inotify@.service \ - $bin/lib/systemd/system/syncthing-inotify@.service \ - --replace /usr/bin/syncthing-inotify $bin/bin/syncthing-inotify - - substitute $src/etc/linux-systemd/user/syncthing-inotify.service \ - $bin/lib/systemd/user/syncthing-inotify.service \ - --replace /usr/bin/syncthing-inotify $bin/bin/syncthing-inotify - ''; - - meta = with stdenv.lib; { - homepage = https://github.com/syncthing/syncthing-inotify; - description = "File watcher intended for use with Syncthing"; - license = licenses.mpl20; - maintainers = with maintainers; [ joko peterhoeg ]; - platforms = platforms.unix; - }; -} diff --git a/pkgs/applications/networking/tcpkali/default.nix b/pkgs/applications/networking/tcpkali/default.nix index 79bc32dfa40d..8a056e21692b 100644 --- a/pkgs/applications/networking/tcpkali/default.nix +++ b/pkgs/applications/networking/tcpkali/default.nix @@ -1,6 +1,6 @@ {stdenv, autoreconfHook, fetchFromGitHub, bison}: -let version = "0.9"; in +let version = "1.1.1"; in stdenv.mkDerivation rec { name = "tcpkali-${version}"; @@ -8,7 +8,7 @@ stdenv.mkDerivation rec { owner = "machinezone"; repo = "tcpkali"; rev = "v${version}"; - sha256 = "03cbmnc60wkd7f4bapn5cbm3c4zas2l0znsbpci2mn8ms8agif82"; + sha256 = "09ky3cccaphcqc6nhfs00pps99lasmzc2pf5vk0gi8hlqbbhilxf"; }; nativeBuildInputs = [ autoreconfHook ]; buildInputs = [ bison]; diff --git a/pkgs/applications/networking/testssl/default.nix b/pkgs/applications/networking/testssl/default.nix index 50ebee4a0ce5..8ac2f7b0a3b6 100644 --- a/pkgs/applications/networking/testssl/default.nix +++ b/pkgs/applications/networking/testssl/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchFromGitHub, pkgs }: let - version = "2.9.5-1"; + version = "2.9.5-2"; pwdBinPath = "${stdenv.lib.makeBinPath (with pkgs; [ coreutils ])}/pwd"; opensslBinPath = "${stdenv.lib.makeBinPath (with pkgs; [ openssl ])}/openssl"; @@ -12,7 +12,7 @@ in stdenv.mkDerivation rec { owner = "drwetter"; repo = "testssl.sh"; rev = "v${version}"; - sha256 = "0hz6g685jwl0c0jrdca746425xpwiwc8lnlc2gigga5hkcq8qzl9"; + sha256 = "0nrzb2lhjq0s4dabyq8nldjijsld9gq4cxm8ys1cw5jyz1875g2w"; }; nativeBuildInputs = with pkgs; [ diff --git a/pkgs/applications/office/calligra/default.nix b/pkgs/applications/office/calligra/default.nix index 1537dd9b03ff..8449cdf05def 100644 --- a/pkgs/applications/office/calligra/default.nix +++ b/pkgs/applications/office/calligra/default.nix @@ -1,6 +1,6 @@ { mkDerivation, lib, fetchurl, fetchpatch, extra-cmake-modules, kdoctools, makeWrapper, - boost, qtwebkit, qtx11extras, shared_mime_info, + boost, qtwebkit, qtx11extras, shared-mime-info, breeze-icons, kactivities, karchive, kcodecs, kcompletion, kconfig, kconfigwidgets, kcoreaddons, kdbusaddons, kdiagram, kguiaddons, khtml, ki18n, kiconthemes, kitemviews, kjobwidgets, kcmutils, kdelibs4support, kio, kross, @@ -36,7 +36,7 @@ mkDerivation rec { nativeBuildInputs = [ extra-cmake-modules kdoctools makeWrapper ]; buildInputs = [ - boost qtwebkit qtx11extras shared_mime_info + boost qtwebkit qtx11extras shared-mime-info kactivities karchive kcodecs kcompletion kconfig kconfigwidgets kcoreaddons kdbusaddons kdiagram kguiaddons khtml ki18n kiconthemes kitemviews kjobwidgets kcmutils kdelibs4support kio kross knotifications knotifyconfig kparts diff --git a/pkgs/applications/office/gnucash/2.6.nix b/pkgs/applications/office/gnucash/2.6.nix index 14c954c0c831..c768f4c7fa34 100644 --- a/pkgs/applications/office/gnucash/2.6.nix +++ b/pkgs/applications/office/gnucash/2.6.nix @@ -1,7 +1,7 @@ { fetchurl, fetchpatch, stdenv, intltool, pkgconfig, file, makeWrapper , libxml2, libxslt, perl, perlPackages, gconf, guile , glib, gtk2, libofx, aqbanking, gwenhywfar, libgnomecanvas, goffice -, webkit, glibcLocales, gsettings_desktop_schemas, dconf +, webkit, glibcLocales, gsettings-desktop-schemas, dconf , gettext, swig, slibGuile, enchant, bzip2, isocodes, libdbi, libdbiDrivers , pango, gdk_pixbuf }: @@ -38,7 +38,7 @@ stdenv.mkDerivation rec { # glib, gtk... glib gtk2 goffice webkit # gnome... - dconf gconf libgnomecanvas gsettings_desktop_schemas + dconf gconf libgnomecanvas gsettings-desktop-schemas # financial libofx aqbanking gwenhywfar # perl diff --git a/pkgs/applications/office/grisbi/default.nix b/pkgs/applications/office/grisbi/default.nix index 29c30204ddbe..62dcf5dd8a88 100644 --- a/pkgs/applications/office/grisbi/default.nix +++ b/pkgs/applications/office/grisbi/default.nix @@ -1,5 +1,5 @@ { fetchurl, stdenv, gtk, pkgconfig, libofx, intltool, wrapGAppsHook -, hicolor_icon_theme, libsoup, gnome3 }: +, hicolor-icon-theme, libsoup, gnome3 }: stdenv.mkDerivation rec { name = "grisbi-${version}"; @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig wrapGAppsHook ]; - buildInputs = [ gtk libofx intltool hicolor_icon_theme libsoup + buildInputs = [ gtk libofx intltool hicolor-icon-theme libsoup gnome3.defaultIconTheme ]; meta = with stdenv.lib; { diff --git a/pkgs/applications/office/homebank/default.nix b/pkgs/applications/office/homebank/default.nix index 3d63b4195a27..f4e59d1ca049 100644 --- a/pkgs/applications/office/homebank/default.nix +++ b/pkgs/applications/office/homebank/default.nix @@ -1,5 +1,5 @@ { fetchurl, stdenv, gtk, pkgconfig, libofx, intltool, wrapGAppsHook -, hicolor_icon_theme, libsoup, gnome3 }: +, hicolor-icon-theme, libsoup, gnome3 }: stdenv.mkDerivation rec { name = "homebank-5.1.7"; @@ -9,7 +9,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig wrapGAppsHook ]; - buildInputs = [ gtk libofx intltool hicolor_icon_theme libsoup + buildInputs = [ gtk libofx intltool hicolor-icon-theme libsoup gnome3.defaultIconTheme ]; meta = with stdenv.lib; { diff --git a/pkgs/applications/office/impressive/default.nix b/pkgs/applications/office/impressive/default.nix index 59249d1a6eb0..4f1bce4a2d24 100644 --- a/pkgs/applications/office/impressive/default.nix +++ b/pkgs/applications/office/impressive/default.nix @@ -2,7 +2,7 @@ , mesa, SDL, freeglut, ghostscript, pdftk, dejavu_fonts }: let - version = "0.11.1"; + version = "0.12.0"; pythonEnv = python2.withPackages (ps: with ps; [pyopengl pygame pillow]); in stdenv.mkDerivation { # This project was formerly known as KeyJNote. @@ -12,7 +12,7 @@ in stdenv.mkDerivation { src = fetchurl { url = "mirror://sourceforge/impressive/Impressive-${version}.tar.gz"; - sha256 = "0b3rmy6acp2vmf5nill3aknxvr9a5aawk1vnphkah61anxp62gsr"; + sha256 = "0zaqq3yvd296mfr5bxpj2hqlk7vrb0rsbgd4dc1l5ag46giqvivx"; }; buildInputs = [ makeWrapper pythonEnv ]; diff --git a/pkgs/applications/office/jabref/default.nix b/pkgs/applications/office/jabref/default.nix index e7b821834546..5dfd03570121 100644 --- a/pkgs/applications/office/jabref/default.nix +++ b/pkgs/applications/office/jabref/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, makeWrapper, makeDesktopItem, jdk, jre, wrapGAppsHook, gtk3, gsettings_desktop_schemas }: +{ stdenv, fetchurl, makeWrapper, makeDesktopItem, jdk, jre, wrapGAppsHook, gtk3, gsettings-desktop-schemas }: stdenv.mkDerivation rec { version = "3.8.1"; @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { exec = "jabref"; }; - buildInputs = [ makeWrapper jdk wrapGAppsHook gtk3 gsettings_desktop_schemas ]; + buildInputs = [ makeWrapper jdk wrapGAppsHook gtk3 gsettings-desktop-schemas ]; unpackPhase = "#"; diff --git a/pkgs/applications/office/libreoffice/default.nix b/pkgs/applications/office/libreoffice/default.nix index c8948d13cf7f..12989a4b8eff 100644 --- a/pkgs/applications/office/libreoffice/default.nix +++ b/pkgs/applications/office/libreoffice/default.nix @@ -6,7 +6,7 @@ , openssl, gperf, cppunit, GConf, ORBit2, poppler , librsvg, gnome_vfs, mesa, bsh, CoinMP, libwps, libabw , autoconf, automake, openldap, bash, hunspell, librdf_redland, nss, nspr -, libwpg, dbus_glib, glibc, qt4, clucene_core, libcdr, lcms, vigra +, libwpg, dbus-glib, glibc, qt4, clucene_core, libcdr, lcms, vigra , unixODBC, mdds, sane-backends, mythes, libexttextcat, libvisio , fontsConf, pkgconfig, libzip, bluez5, libtool, maven , libatomic_ops, graphite2, harfbuzz, libodfgen, libzmf @@ -242,7 +242,7 @@ in stdenv.mkDerivation rec { buildInputs = with xorg; [ ant ArchiveZip autoconf automake bison boost cairo clucene_core - CompressZlib cppunit cups curl db dbus_glib expat file flex fontconfig + CompressZlib cppunit cups curl db dbus-glib expat file flex fontconfig freetype GConf getopt gnome_vfs gperf gtk3 gtk2 hunspell icu jdk lcms libcdr libexttextcat unixODBC libjpeg libmspack librdf_redland librsvg libsndfile libvisio libwpd libwpg libX11 diff --git a/pkgs/applications/office/libreoffice/generate-libreoffice-srcs.py b/pkgs/applications/office/libreoffice/generate-libreoffice-srcs.py index dcda0ff782dc..636f36cb383b 100755 --- a/pkgs/applications/office/libreoffice/generate-libreoffice-srcs.py +++ b/pkgs/applications/office/libreoffice/generate-libreoffice-srcs.py @@ -256,7 +256,7 @@ def interpret(x): Output: One of 1. Dict with keys 'name' and 'attrs' 2. 'unrecognized' (if interpretation failed) """ - for f in [interpret_md5, interpret_sha256, interpret_tarball_with_md5, interpret_tarball]: + for f in [interpret_md5, interpret_sha256, interpret_tarball_with_md5, interpret_tarball, interpret_jar]: result = f(x) if result is not None: return result @@ -296,6 +296,13 @@ def interpret_tarball(x): return {'name': match.group(1), 'attrs': {'tarball': x['value'], 'brief': True}} +def interpret_jar(x): + match = re.match('^(.*)_JAR$', x['key']) + + if match: + return {'name': match.group(1), + 'attrs': {'tarball': x['value'], 'brief': True}} + def interpret_tarball_with_md5(x): """ diff --git a/pkgs/applications/office/libreoffice/libreoffice-srcs-still.nix b/pkgs/applications/office/libreoffice/libreoffice-srcs-still.nix index 478c6c4d9062..e82fa241c00c 100644 --- a/pkgs/applications/office/libreoffice/libreoffice-srcs-still.nix +++ b/pkgs/applications/office/libreoffice/libreoffice-srcs-still.nix @@ -3,43 +3,43 @@ name = "libabw-0.1.1.tar.bz2"; url = "http://dev-www.libreoffice.org/src/libabw-0.1.1.tar.bz2"; sha256 = "7a3d3415cf82ab9894f601d1b3057c4615060304d5279efdec6275e01b96a199"; - md5 = "7a3815b506d064313ba309617b6f5a0b"; - md5name = "7a3815b506d064313ba309617b6f5a0b-libabw-0.1.1.tar.bz2"; + md5 = ""; + md5name = "7a3d3415cf82ab9894f601d1b3057c4615060304d5279efdec6275e01b96a199-libabw-0.1.1.tar.bz2"; } { name = "commons-logging-1.2-src.tar.gz"; url = "http://dev-www.libreoffice.org/src/commons-logging-1.2-src.tar.gz"; sha256 = "49665da5a60d033e6dff40fe0a7f9173e886ae859ce6096c1afe34c48b677c81"; - md5 = "ce977548f1cbf46918e93cd38ac35163"; - md5name = "ce977548f1cbf46918e93cd38ac35163-commons-logging-1.2-src.tar.gz"; + md5 = ""; + md5name = "49665da5a60d033e6dff40fe0a7f9173e886ae859ce6096c1afe34c48b677c81-commons-logging-1.2-src.tar.gz"; } { name = "apr-1.5.2.tar.gz"; url = "http://dev-www.libreoffice.org/src/apr-1.5.2.tar.gz"; sha256 = "1af06e1720a58851d90694a984af18355b65bb0d047be03ec7d659c746d6dbdb"; - md5 = "98492e965963f852ab29f9e61b2ad700"; - md5name = "98492e965963f852ab29f9e61b2ad700-apr-1.5.2.tar.gz"; + md5 = ""; + md5name = "1af06e1720a58851d90694a984af18355b65bb0d047be03ec7d659c746d6dbdb-apr-1.5.2.tar.gz"; } { name = "apr-util-1.5.4.tar.gz"; url = "http://dev-www.libreoffice.org/src/apr-util-1.5.4.tar.gz"; sha256 = "976a12a59bc286d634a21d7be0841cc74289ea9077aa1af46be19d1a6e844c19"; - md5 = "866825c04da827c6e5f53daff5569f42"; - md5name = "866825c04da827c6e5f53daff5569f42-apr-util-1.5.4.tar.gz"; + md5 = ""; + md5name = "976a12a59bc286d634a21d7be0841cc74289ea9077aa1af46be19d1a6e844c19-apr-util-1.5.4.tar.gz"; } { - name = "boost_1_60_0.tar.bz2"; - url = "http://dev-www.libreoffice.org/src/boost_1_60_0.tar.bz2"; - sha256 = "686affff989ac2488f79a97b9479efb9f2abae035b5ed4d8226de6857933fd3b"; - md5 = "65a840e1a0b13a558ff19eeb2c4f0cbe"; - md5name = "65a840e1a0b13a558ff19eeb2c4f0cbe-boost_1_60_0.tar.bz2"; + name = "boost_1_63_0.tar.bz2"; + url = "http://dev-www.libreoffice.org/src/boost_1_63_0.tar.bz2"; + sha256 = "beae2529f759f6b3bf3f4969a19c2e9d6f0c503edcb2de4a61d1428519fcb3b0"; + md5 = ""; + md5name = "beae2529f759f6b3bf3f4969a19c2e9d6f0c503edcb2de4a61d1428519fcb3b0-boost_1_63_0.tar.bz2"; } { name = "breakpad.zip"; url = "http://dev-www.libreoffice.org/src/breakpad.zip"; sha256 = "7060149be16a8789b0ccf596bdeaf63115f03f520acb508f72a14686fb311cb9"; - md5 = "415ce291aa6f2ee1d5db7b62bf62ade8"; - md5name = "415ce291aa6f2ee1d5db7b62bf62ade8-breakpad.zip"; + md5 = ""; + md5name = "7060149be16a8789b0ccf596bdeaf63115f03f520acb508f72a14686fb311cb9-breakpad.zip"; } { name = "bsh-2.0b6-src.zip"; @@ -56,18 +56,18 @@ md5name = "00b516f4704d4a7cb50a1d97e6e8e15b-bzip2-1.0.6.tar.gz"; } { - name = "cairo-1.14.6.tar.xz"; - url = "http://dev-www.libreoffice.org/src/23a0b2f0235431d35238df1d3a517fdb-cairo-1.14.6.tar.xz"; - sha256 = "613cb38447b76a93ff7235e17acd55a78b52ea84a9df128c3f2257f8eaa7b252"; - md5 = "23a0b2f0235431d35238df1d3a517fdb"; - md5name = "23a0b2f0235431d35238df1d3a517fdb-cairo-1.14.6.tar.xz"; + name = "cairo-1.14.8.tar.xz"; + url = "http://dev-www.libreoffice.org/src/cairo-1.14.8.tar.xz"; + sha256 = "d1f2d98ae9a4111564f6de4e013d639cf77155baf2556582295a0f00a9bc5e20"; + md5 = ""; + md5name = "d1f2d98ae9a4111564f6de4e013d639cf77155baf2556582295a0f00a9bc5e20-cairo-1.14.8.tar.xz"; } { name = "libcdr-0.1.3.tar.bz2"; url = "http://dev-www.libreoffice.org/src/libcdr-0.1.3.tar.bz2"; sha256 = "5160bbbfefe52bd4880840fad2b07a512813e37bfaf8ccac062fca238f230f4d"; - md5 = "e369f30b5b861ee0fc4f9e6cbad701fe"; - md5name = "e369f30b5b861ee0fc4f9e6cbad701fe-libcdr-0.1.3.tar.bz2"; + md5 = ""; + md5name = "5160bbbfefe52bd4880840fad2b07a512813e37bfaf8ccac062fca238f230f4d-libcdr-0.1.3.tar.bz2"; } { name = "clucene-core-2.3.3.4.tar.gz"; @@ -80,15 +80,15 @@ name = "libcmis-0.5.1.tar.gz"; url = "http://dev-www.libreoffice.org/src/libcmis-0.5.1.tar.gz"; sha256 = "6acbdf22ecdbaba37728729b75bfc085ee5a4b49a6024757cfb86ccd3da27b0e"; - md5 = "3270154f0f40d86fce849b161f914101"; - md5name = "3270154f0f40d86fce849b161f914101-libcmis-0.5.1.tar.gz"; + md5 = ""; + md5name = "6acbdf22ecdbaba37728729b75bfc085ee5a4b49a6024757cfb86ccd3da27b0e-libcmis-0.5.1.tar.gz"; } { name = "CoinMP-1.7.6.tgz"; url = "http://dev-www.libreoffice.org/src/CoinMP-1.7.6.tgz"; sha256 = "86c798780b9e1f5921fe4efe651a93cb420623b45aa1fdff57af8c37f116113f"; - md5 = "1cce53bf4b40ae29790d2c5c9f8b1129"; - md5name = "1cce53bf4b40ae29790d2c5c9f8b1129-CoinMP-1.7.6.tgz"; + md5 = ""; + md5name = "86c798780b9e1f5921fe4efe651a93cb420623b45aa1fdff57af8c37f116113f-CoinMP-1.7.6.tgz"; } { name = "collada2gltf-master-cb1d97788a.tar.bz2"; @@ -98,11 +98,11 @@ md5name = "4b87018f7fff1d054939d19920b751a0-collada2gltf-master-cb1d97788a.tar.bz2"; } { - name = "cppunit-1.13.2.tar.gz"; - url = "http://dev-www.libreoffice.org/src/cppunit-1.13.2.tar.gz"; - sha256 = "3f47d246e3346f2ba4d7c9e882db3ad9ebd3fcbd2e8b732f946e0e3eeb9f429f"; - md5 = "d1c6bdd5a76c66d2c38331e2d287bc01"; - md5name = "d1c6bdd5a76c66d2c38331e2d287bc01-cppunit-1.13.2.tar.gz"; + name = "cppunit-1.14.0.tar.gz"; + url = "http://dev-www.libreoffice.org/src/cppunit-1.14.0.tar.gz"; + sha256 = "3d569869d27b48860210c758c4f313082103a5e58219a7669b52bfd29d674780"; + md5 = ""; + md5name = "3d569869d27b48860210c758c4f313082103a5e58219a7669b52bfd29d674780-cppunit-1.14.0.tar.gz"; } { name = "converttexttonumber-1-5-0.oxt"; @@ -115,15 +115,22 @@ name = "curl-7.52.1.tar.gz"; url = "http://dev-www.libreoffice.org/src/curl-7.52.1.tar.gz"; sha256 = "a8984e8b20880b621f61a62d95ff3c0763a3152093a9f9ce4287cfd614add6ae"; - md5 = "4e1ef056e117b4d25f4ec42ac609c0d4"; - md5name = "4e1ef056e117b4d25f4ec42ac609c0d4-curl-7.52.1.tar.gz"; + md5 = ""; + md5name = "a8984e8b20880b621f61a62d95ff3c0763a3152093a9f9ce4287cfd614add6ae-curl-7.52.1.tar.gz"; } { name = "libe-book-0.1.2.tar.bz2"; url = "http://dev-www.libreoffice.org/src/libe-book-0.1.2.tar.bz2"; sha256 = "b710a57c633205b933015474d0ac0862253d1c52114d535dd09b20939a0d1850"; - md5 = "6b48eda57914e6343efebc9381027b78"; - md5name = "6b48eda57914e6343efebc9381027b78-libe-book-0.1.2.tar.bz2"; + md5 = ""; + md5name = "b710a57c633205b933015474d0ac0862253d1c52114d535dd09b20939a0d1850-libe-book-0.1.2.tar.bz2"; + } + { + name = "libepoxy-1.3.1.tar.bz2"; + url = "http://dev-www.libreoffice.org/src/libepoxy-1.3.1.tar.bz2"; + sha256 = "1d8668b0a259c709899e1c4bab62d756d9002d546ce4f59c9665e2fc5f001a64"; + md5 = ""; + md5name = "1d8668b0a259c709899e1c4bab62d756d9002d546ce4f59c9665e2fc5f001a64-libepoxy-1.3.1.tar.bz2"; } { name = "epm-3.7.tar.gz"; @@ -136,29 +143,29 @@ name = "libetonyek-0.1.6.tar.bz2"; url = "http://dev-www.libreoffice.org/src/libetonyek-0.1.6.tar.bz2"; sha256 = "032f53e8d7691e48a73ddbe74fa84c906ff6ff32a33e6ee2a935b6fdb6aecb78"; - md5 = "77ff46936dcc83670557274e7dd2aa33"; - md5name = "77ff46936dcc83670557274e7dd2aa33-libetonyek-0.1.6.tar.bz2"; + md5 = ""; + md5name = "032f53e8d7691e48a73ddbe74fa84c906ff6ff32a33e6ee2a935b6fdb6aecb78-libetonyek-0.1.6.tar.bz2"; } { name = "expat-2.2.3.tar.bz2"; url = "http://dev-www.libreoffice.org/src/expat-2.2.3.tar.bz2"; sha256 = "b31890fb02f85c002a67491923f89bda5028a880fd6c374f707193ad81aace5f"; - md5 = "f053af63ef5f39bd9b78d01fbc203334"; - md5name = "f053af63ef5f39bd9b78d01fbc203334-expat-2.2.3.tar.bz2"; + md5 = ""; + md5name = "b31890fb02f85c002a67491923f89bda5028a880fd6c374f707193ad81aace5f-expat-2.2.3.tar.bz2"; } { name = "Firebird-3.0.0.32483-0.tar.bz2"; url = "http://dev-www.libreoffice.org/src/Firebird-3.0.0.32483-0.tar.bz2"; sha256 = "6994be3555e23226630c587444be19d309b25b0fcf1f87df3b4e3f88943e5860"; - md5 = "821260b61dafc22899d1464d4e91ee6a"; - md5name = "821260b61dafc22899d1464d4e91ee6a-Firebird-3.0.0.32483-0.tar.bz2"; + md5 = ""; + md5name = "6994be3555e23226630c587444be19d309b25b0fcf1f87df3b4e3f88943e5860-Firebird-3.0.0.32483-0.tar.bz2"; } { - name = "fontconfig-2.8.0.tar.gz"; - url = "http://dev-www.libreoffice.org/src/77e15a92006ddc2adbb06f840d591c0e-fontconfig-2.8.0.tar.gz"; - sha256 = "fa2a1c6eea654d9fce7a4b1220f10c99cdec848dccaf1625c01f076b31382335"; - md5 = "77e15a92006ddc2adbb06f840d591c0e"; - md5name = "77e15a92006ddc2adbb06f840d591c0e-fontconfig-2.8.0.tar.gz"; + name = "fontconfig-2.12.1.tar.bz2"; + url = "http://dev-www.libreoffice.org/src/fontconfig-2.12.1.tar.bz2"; + sha256 = "b449a3e10c47e1d1c7a6ec6e2016cca73d3bd68fbbd4f0ae5cc6b573f7d6c7f3"; + md5 = ""; + md5name = "b449a3e10c47e1d1c7a6ec6e2016cca73d3bd68fbbd4f0ae5cc6b573f7d6c7f3-fontconfig-2.12.1.tar.bz2"; } { name = "crosextrafonts-20130214.tar.gz"; @@ -241,29 +248,22 @@ name = "EmojiOneColor-SVGinOT-1.3.tar.gz"; url = "http://dev-www.libreoffice.org/src/EmojiOneColor-SVGinOT-1.3.tar.gz"; sha256 = "d1a08f7c10589f22740231017694af0a7a270760c8dec33d8d1c038e2be0a0c7"; - md5 = "919389b307ee8696288ea3b8210ab974"; - md5name = "919389b307ee8696288ea3b8210ab974-EmojiOneColor-SVGinOT-1.3.tar.gz"; + md5 = ""; + md5name = "d1a08f7c10589f22740231017694af0a7a270760c8dec33d8d1c038e2be0a0c7-EmojiOneColor-SVGinOT-1.3.tar.gz"; } { name = "libfreehand-0.1.1.tar.bz2"; url = "http://dev-www.libreoffice.org/src/libfreehand-0.1.1.tar.bz2"; sha256 = "45dab0e5d632eb51eeb00847972ca03835d6791149e9e714f093a9df2b445877"; - md5 = "8cf70c5dc4d24d2dc4a107f509d2d6d7"; - md5name = "8cf70c5dc4d24d2dc4a107f509d2d6d7-libfreehand-0.1.1.tar.bz2"; 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+ sha256 = "4b483a196bbe82bc0f7cb4cdf70ef1cedb91139bd2e037eabaed4a4d6ed2299a"; + md5 = ""; + md5name = "4b483a196bbe82bc0f7cb4cdf70ef1cedb91139bd2e037eabaed4a4d6ed2299a-libmwaw-0.3.11.tar.xz"; } { name = "mysql-connector-c++-1.1.4.tar.gz"; @@ -556,15 +570,15 @@ name = "nss-3.29.5-with-nspr-4.13.1.tar.gz"; url = "http://dev-www.libreoffice.org/src/nss-3.29.5-with-nspr-4.13.1.tar.gz"; sha256 = "8cb8624147737d1b4587c50bf058afbb6effc0f3c205d69b5ef4077b3bfed0e4"; - md5 = "e55ee06b22687df68fafc6a30c0554b2"; - md5name = "e55ee06b22687df68fafc6a30c0554b2-nss-3.29.5-with-nspr-4.13.1.tar.gz"; + md5 = ""; + md5name = "8cb8624147737d1b4587c50bf058afbb6effc0f3c205d69b5ef4077b3bfed0e4-nss-3.29.5-with-nspr-4.13.1.tar.gz"; } { name = "libodfgen-0.1.6.tar.bz2"; url = "http://dev-www.libreoffice.org/src/libodfgen-0.1.6.tar.bz2"; sha256 = "2c7b21892f84a4c67546f84611eccdad6259875c971e98ddb027da66ea0ac9c2"; - md5 = "32572ea48d9021bbd6fa317ddb697abc"; - md5name = "32572ea48d9021bbd6fa317ddb697abc-libodfgen-0.1.6.tar.bz2"; + md5 = ""; + md5name = "2c7b21892f84a4c67546f84611eccdad6259875c971e98ddb027da66ea0ac9c2-libodfgen-0.1.6.tar.bz2"; } { name = "odfvalidator-1.1.8-incubating-SNAPSHOT-jar-with-dependencies.jar"; @@ -584,43 +598,50 @@ name = "OpenCOLLADA-master-6509aa13af.tar.bz2"; url = "http://dev-www.libreoffice.org/src/OpenCOLLADA-master-6509aa13af.tar.bz2"; sha256 = "8f25d429237cde289a448c82a0a830791354ccce5ee40d77535642e46367d6c4"; - md5 = "4ca8a6ef0afeefc864e9ef21b9f14bd6"; - md5name = "4ca8a6ef0afeefc864e9ef21b9f14bd6-OpenCOLLADA-master-6509aa13af.tar.bz2"; + md5 = ""; + md5name = "8f25d429237cde289a448c82a0a830791354ccce5ee40d77535642e46367d6c4-OpenCOLLADA-master-6509aa13af.tar.bz2"; } { name = "openldap-2.4.44.tgz"; url = "http://dev-www.libreoffice.org/src/openldap-2.4.44.tgz"; sha256 = "d7de6bf3c67009c95525dde3a0212cc110d0a70b92af2af8e3ee800e81b88400"; - md5 = "693ac26de86231f8dcae2b4e9d768e51"; - md5name = "693ac26de86231f8dcae2b4e9d768e51-openldap-2.4.44.tgz"; + md5 = ""; + md5name = "d7de6bf3c67009c95525dde3a0212cc110d0a70b92af2af8e3ee800e81b88400-openldap-2.4.44.tgz"; } { - name = "openssl-1.0.2h.tar.gz"; - url = "http://dev-www.libreoffice.org/src/openssl-1.0.2h.tar.gz"; - sha256 = "1d4007e53aad94a5b2002fe045ee7bb0b3d98f1a47f8b2bc851dcd1c74332919"; - md5 = "9392e65072ce4b614c1392eefc1f23d0"; - md5name = "9392e65072ce4b614c1392eefc1f23d0-openssl-1.0.2h.tar.gz"; + name = "openssl-1.0.2k.tar.gz"; + url = "http://dev-www.libreoffice.org/src/openssl-1.0.2k.tar.gz"; + sha256 = "6b3977c61f2aedf0f96367dcfb5c6e578cf37e7b8d913b4ecb6643c3cb88d8c0"; + md5 = ""; + md5name = "6b3977c61f2aedf0f96367dcfb5c6e578cf37e7b8d913b4ecb6643c3cb88d8c0-openssl-1.0.2k.tar.gz"; } { name = "liborcus-0.12.1.tar.gz"; url = "http://dev-www.libreoffice.org/src/liborcus-0.12.1.tar.gz"; sha256 = "676b1fedd721f64489650f5e76d7f98b750439914d87cae505b8163d08447908"; - md5 = "d0ad3a2fcf7008e5b33604bab33df3ad"; - md5name = "d0ad3a2fcf7008e5b33604bab33df3ad-liborcus-0.12.1.tar.gz"; + md5 = ""; + md5name = "676b1fedd721f64489650f5e76d7f98b750439914d87cae505b8163d08447908-liborcus-0.12.1.tar.gz"; } { name = "owncloud-android-library-0.9.4-no-binary-deps.tar.gz"; url = "http://dev-www.libreoffice.org/src/owncloud-android-library-0.9.4-no-binary-deps.tar.gz"; sha256 = "b18b3e3ef7fae6a79b62f2bb43cc47a5346b6330f6a383dc4be34439aca5e9fb"; - md5 = "593f0aa47bf2efc0efda2d28fae063b2"; - md5name = "593f0aa47bf2efc0efda2d28fae063b2-owncloud-android-library-0.9.4-no-binary-deps.tar.gz"; + md5 = ""; + md5name = "b18b3e3ef7fae6a79b62f2bb43cc47a5346b6330f6a383dc4be34439aca5e9fb-owncloud-android-library-0.9.4-no-binary-deps.tar.gz"; } { name = "libpagemaker-0.0.3.tar.bz2"; url = "http://dev-www.libreoffice.org/src/libpagemaker-0.0.3.tar.bz2"; sha256 = "3b5de037692f8e156777a75e162f6b110fa24c01749e4a66d7eb83f364e52a33"; - md5 = "5c4985a68be0b79d3f809da5e12b143c"; - md5name = "5c4985a68be0b79d3f809da5e12b143c-libpagemaker-0.0.3.tar.bz2"; + md5 = ""; + md5name = "3b5de037692f8e156777a75e162f6b110fa24c01749e4a66d7eb83f364e52a33-libpagemaker-0.0.3.tar.bz2"; + } + { + name = "pdfium-3064.tar.bz2"; + url = "http://dev-www.libreoffice.org/src/pdfium-3064.tar.bz2"; + sha256 = "ded806dc9e2a4005d8c0a6b7fcb232ab36221d72d9ff5b815e8244987299d883"; + md5 = ""; + md5name = "ded806dc9e2a4005d8c0a6b7fcb232ab36221d72d9ff5b815e8244987299d883-pdfium-3064.tar.bz2"; } { name = "pixman-0.34.0.tar.gz"; @@ -633,15 +654,15 @@ name = "libpng-1.6.28.tar.gz"; url = "http://dev-www.libreoffice.org/src/libpng-1.6.28.tar.gz"; sha256 = "b6cec903e74e9fdd7b5bbcde0ab2415dd12f2f9e84d9e4d9ddd2ba26a41623b2"; - md5 = "897ccec1ebfb0922e83c2bfaa1be8748"; - md5name = "897ccec1ebfb0922e83c2bfaa1be8748-libpng-1.6.28.tar.gz"; + md5 = ""; + md5name = "b6cec903e74e9fdd7b5bbcde0ab2415dd12f2f9e84d9e4d9ddd2ba26a41623b2-libpng-1.6.28.tar.gz"; } { - name = "poppler-0.49.0.tar.xz"; - url = "http://dev-www.libreoffice.org/src/poppler-0.49.0.tar.xz"; - sha256 = "14485f0e1e43dcddf49cfc02c2ccb92910ba3e0e91e06f4bd2642ec00cb3a79f"; - md5 = "9e057ed8eee1f9979fa75d8f044783b8"; - md5name = "9e057ed8eee1f9979fa75d8f044783b8-poppler-0.49.0.tar.xz"; + name = "poppler-0.56.0.tar.xz"; + url = "http://dev-www.libreoffice.org/src/poppler-0.56.0.tar.xz"; + sha256 = "869dbadf99ed882e776acbdbc06689d8a81872a2963440b1e8516cd7a2577173"; + md5 = ""; + md5name = "869dbadf99ed882e776acbdbc06689d8a81872a2963440b1e8516cd7a2577173-poppler-0.56.0.tar.xz"; } { name = "postgresql-9.2.1.tar.bz2"; @@ -650,19 +671,12 @@ md5 = "c0b4799ea9850eae3ead14f0a60e9418"; md5name = "c0b4799ea9850eae3ead14f0a60e9418-postgresql-9.2.1.tar.bz2"; } - { - name = "Python-3.3.5.tgz"; - url = "http://dev-www.libreoffice.org/src/Python-3.3.5.tgz"; - sha256 = "916bc57dd8524dc27429bebae7b39d6942742cf9699b875b2b496a3d960c7168"; - md5 = "803a75927f8f241ca78633890c798021"; - md5name = "803a75927f8f241ca78633890c798021-Python-3.3.5.tgz"; - } { name = "Python-3.5.4.tgz"; url = "http://dev-www.libreoffice.org/src/Python-3.5.4.tgz"; sha256 = "6ed87a8b6c758cc3299a8b433e8a9a9122054ad5bc8aad43299cff3a53d8ca44"; - md5 = "2ed4802b7a2a7e40d2e797272bf388ec"; - md5name = "2ed4802b7a2a7e40d2e797272bf388ec-Python-3.5.4.tgz"; + md5 = ""; + md5name = "6ed87a8b6c758cc3299a8b433e8a9a9122054ad5bc8aad43299cff3a53d8ca44-Python-3.5.4.tgz"; } { name = "raptor2-2.0.15.tar.gz"; @@ -689,8 +703,8 @@ name = "librevenge-0.0.4.tar.bz2"; url = "http://dev-www.libreoffice.org/src/librevenge-0.0.4.tar.bz2"; sha256 = "c51601cd08320b75702812c64aae0653409164da7825fd0f451ac2c5dbe77cbf"; - md5 = "5b9ac52ec77d4d19157cf5962ebc0aea"; - md5name = "5b9ac52ec77d4d19157cf5962ebc0aea-librevenge-0.0.4.tar.bz2"; + md5 = ""; + md5name = "c51601cd08320b75702812c64aae0653409164da7825fd0f451ac2c5dbe77cbf-librevenge-0.0.4.tar.bz2"; } { name = "rhino1_5R5.zip"; @@ -703,15 +717,15 @@ name = "serf-1.2.1.tar.bz2"; url = "http://dev-www.libreoffice.org/src/serf-1.2.1.tar.bz2"; sha256 = "6988d394b62c3494635b6f0760bc3079f9a0cd380baf0f6b075af1eb9fa5e700"; - md5 = "4f8e76c9c6567aee1d66aba49f76a58b"; - md5name = "4f8e76c9c6567aee1d66aba49f76a58b-serf-1.2.1.tar.bz2"; + md5 = ""; + md5name = "6988d394b62c3494635b6f0760bc3079f9a0cd380baf0f6b075af1eb9fa5e700-serf-1.2.1.tar.bz2"; } { - name = "libstaroffice-0.0.2.tar.bz2"; - url = "http://dev-www.libreoffice.org/src/libstaroffice-0.0.2.tar.bz2"; - sha256 = "f06eb29d13357f1aa1944de0be1162de05d9f9333b5f54e9bf762415029a8899"; - md5 = "4012950240c2bf768c9b29ad376123d7"; - md5name = "4012950240c2bf768c9b29ad376123d7-libstaroffice-0.0.2.tar.bz2"; + name = "libstaroffice-0.0.3.tar.xz"; + url = "http://dev-www.libreoffice.org/src/libstaroffice-0.0.3.tar.xz"; + sha256 = "bedeec104b4cc3896b3dfd1976dda5ce7392d1942bf8f5d2f7d796cc47e422c6"; + md5 = ""; + md5name = "bedeec104b4cc3896b3dfd1976dda5ce7392d1942bf8f5d2f7d796cc47e422c6-libstaroffice-0.0.3.tar.xz"; } { name = "swingExSrc.zip"; @@ -731,29 +745,29 @@ name = "libvisio-0.1.5.tar.bz2"; url = "http://dev-www.libreoffice.org/src/libvisio-0.1.5.tar.bz2"; sha256 = "b83b7991a40b4e7f07d0cac7bb46ddfac84dece705fd18e21bfd119a09be458e"; - md5 = "cbee198a78b842b2087f32d33c522818"; - md5name = "cbee198a78b842b2087f32d33c522818-libvisio-0.1.5.tar.bz2"; + md5 = ""; + md5name = "b83b7991a40b4e7f07d0cac7bb46ddfac84dece705fd18e21bfd119a09be458e-libvisio-0.1.5.tar.bz2"; } { name = "libwpd-0.10.1.tar.bz2"; url = "http://dev-www.libreoffice.org/src/libwpd-0.10.1.tar.bz2"; sha256 = "efc20361d6e43f9ff74de5f4d86c2ce9c677693f5da08b0a88d603b7475a508d"; - md5 = "79b56bcc349264d686a67994506ad199"; - md5name = "79b56bcc349264d686a67994506ad199-libwpd-0.10.1.tar.bz2"; + md5 = ""; + md5name = "efc20361d6e43f9ff74de5f4d86c2ce9c677693f5da08b0a88d603b7475a508d-libwpd-0.10.1.tar.bz2"; } { name = "libwpg-0.3.1.tar.bz2"; url = "http://dev-www.libreoffice.org/src/libwpg-0.3.1.tar.bz2"; sha256 = "29049b95895914e680390717a243b291448e76e0f82fb4d2479adee5330fbb59"; - md5 = "dfd066658ec9d2fb2262417039a8a1c3"; - md5name = "dfd066658ec9d2fb2262417039a8a1c3-libwpg-0.3.1.tar.bz2"; + md5 = ""; + md5name = "29049b95895914e680390717a243b291448e76e0f82fb4d2479adee5330fbb59-libwpg-0.3.1.tar.bz2"; } { - name = "libwps-0.4.4.tar.bz2"; - url = "http://dev-www.libreoffice.org/src/libwps-0.4.4.tar.bz2"; - sha256 = "387c46d9543bb566381fddb8991e2838599fc500ee132fef9631a704c5cbed73"; - md5 = "dcfd1d18bfa9818cf3ab21663ba857a3"; - md5name = "dcfd1d18bfa9818cf3ab21663ba857a3-libwps-0.4.4.tar.bz2"; + name = "libwps-0.4.6.tar.xz"; + url = "http://dev-www.libreoffice.org/src/libwps-0.4.6.tar.xz"; + sha256 = "e48a7c2fd20048a0a8eaf69bad972575f8b9f06e7497c787463f127d332fccd0"; + md5 = ""; + md5name = "e48a7c2fd20048a0a8eaf69bad972575f8b9f06e7497c787463f127d332fccd0-libwps-0.4.6.tar.xz"; } { name = "xsltml_2.1.2.zip"; @@ -763,17 +777,17 @@ md5name = "a7983f859eafb2677d7ff386a023bc40-xsltml_2.1.2.zip"; } { - name = "zlib-1.2.8.tar.gz"; - url = "http://dev-www.libreoffice.org/src/zlib-1.2.8.tar.gz"; - sha256 = "36658cb768a54c1d4dec43c3116c27ed893e88b02ecfcb44f2166f9c0b7f2a0d"; - md5 = "44d667c142d7cda120332623eab69f40"; - md5name = "44d667c142d7cda120332623eab69f40-zlib-1.2.8.tar.gz"; + name = "zlib-1.2.11.tar.xz"; + url = "http://dev-www.libreoffice.org/src/zlib-1.2.11.tar.xz"; + sha256 = "4ff941449631ace0d4d203e3483be9dbc9da454084111f97ea0a2114e19bf066"; + md5 = ""; + md5name = "4ff941449631ace0d4d203e3483be9dbc9da454084111f97ea0a2114e19bf066-zlib-1.2.11.tar.xz"; } { name = "libzmf-0.0.1.tar.bz2"; url = "http://dev-www.libreoffice.org/src/libzmf-0.0.1.tar.bz2"; sha256 = "b69f7f6e94cf695c4b672ca65def4825490a1e7dee34c2126309b96d21a19e6b"; - md5 = "c611df8664240de0276ab95670f413d8"; - md5name = "c611df8664240de0276ab95670f413d8-libzmf-0.0.1.tar.bz2"; + md5 = ""; + md5name = "b69f7f6e94cf695c4b672ca65def4825490a1e7dee34c2126309b96d21a19e6b-libzmf-0.0.1.tar.bz2"; } ] diff --git a/pkgs/applications/office/libreoffice/still-primary-src.nix b/pkgs/applications/office/libreoffice/still-primary-src.nix index 82133cdf6813..32abab8abf8e 100644 --- a/pkgs/applications/office/libreoffice/still-primary-src.nix +++ b/pkgs/applications/office/libreoffice/still-primary-src.nix @@ -2,8 +2,8 @@ rec { major = "5"; - minor = "3"; - patch = "6"; + minor = "4"; + patch = "5"; tweak = "1"; subdir = "${major}.${minor}.${patch}"; @@ -11,7 +11,7 @@ rec { version = "${subdir}${if tweak == "" then "" else "."}${tweak}"; src = fetchurl { - url = "http://download.documentfoundation.org/libreoffice/src/${subdir}/libreoffice-${version}.tar.xz"; - sha256 = "023a7hr7v5cf0ipga4ijhyl58ncgbjrp500qq5fwf65j8g2c3apz"; + url = "https://download.documentfoundation.org/libreoffice/src/${subdir}/libreoffice-${version}.tar.xz"; + sha256 = "167bh6jgyhfcvn3g7xghkg4nb99h91diypdlry5df21xs8bis5gb"; }; } diff --git a/pkgs/applications/office/libreoffice/still.nix b/pkgs/applications/office/libreoffice/still.nix index 5070de5262e5..57dd30280e84 100644 --- a/pkgs/applications/office/libreoffice/still.nix +++ b/pkgs/applications/office/libreoffice/still.nix @@ -4,17 +4,18 @@ , bison, flex, zip, unzip, gtk3, gtk2, libmspack, getopt, file, cairo, which , icu, boost, jdk, ant, cups, xorg, libcmis , openssl, gperf, cppunit, GConf, ORBit2, poppler -, librsvg, gnome_vfs, mesa, bsh, CoinMP, libwps, libabw, libzmf +, librsvg, gnome_vfs, mesa, bsh, CoinMP, libwps, libabw , autoconf, automake, openldap, bash, hunspell, librdf_redland, nss, nspr -, libwpg, dbus_glib, glibc, qt4, clucene_core, libcdr, lcms, vigra +, libwpg, dbus-glib, glibc, qt4, clucene_core, libcdr, lcms, vigra , unixODBC, mdds, sane-backends, mythes, libexttextcat, libvisio , fontsConf, pkgconfig, libzip, bluez5, libtool, maven -, libatomic_ops, graphite2, harfbuzz, libodfgen +, libatomic_ops, graphite2, harfbuzz, libodfgen, libzmf , librevenge, libe-book, libmwaw, glm, glew, gst_all_1 , gdb, commonsLogging, librdf_rasqal, wrapGAppsHook -, defaultIconTheme, glib, ncurses +, defaultIconTheme, glib, ncurses, xmlsec, epoxy, gpgme , langs ? [ "ca" "de" "en-GB" "en-US" "eo" "es" "fr" "hu" "it" "nl" "pl" "ru" "sl" ] , withHelp ? true +, kdeIntegration ? false }: let @@ -28,27 +29,27 @@ let langsSpaces = lib.concatStringsSep " " langs; fetchSrc = {name, sha256}: fetchurl { - url = "http://download.documentfoundation.org/libreoffice/src/${subdir}/libreoffice-${name}-${version}.tar.xz"; + url = "https://download.documentfoundation.org/libreoffice/src/${subdir}/libreoffice-${name}-${version}.tar.xz"; inherit sha256; }; srcs = { third_party = [ (let md5 = "185d60944ea767075d27247c3162b3bc"; in fetchurl rec { - url = "http://dev-www.libreoffice.org/extern/${md5}-${name}"; + url = "https://dev-www.libreoffice.org/extern/${md5}-${name}"; sha256 = "1infwvv1p6i21scywrldsxs22f62x85mns4iq8h6vr6vlx3fdzga"; name = "unowinreg.dll"; }) ] ++ (map (x : ((fetchurl {inherit (x) url sha256 name;}) // {inherit (x) md5name md5;})) (import ./libreoffice-srcs-still.nix)); translations = fetchSrc { name = "translations"; - sha256 = "0mvfc33pkyrdd7h4kyi6lnzydaka8b5vw0ns50rw08kg9iirig4i"; + sha256 = "0max423hdlr4j6y6ymng15awilh2aq8gly1hsf16lnk1pxihgr54"; }; # TODO: dictionaries help = fetchSrc { name = "help"; - sha256 = "0yflll24yd4nxqxisb6mx1qgqk4awkwwi41wxmdaiq8las59sk95"; + sha256 = "14ziy02qq092x8h29f9dlwvvk2scd5v385zhln4848lf3q5cnifl"; }; }; @@ -64,16 +65,15 @@ in stdenv.mkDerivation rec { # For some reason librdf_redland sometimes refers to rasqal.h instead # of rasqal/rasqal.h - NIX_CFLAGS_COMPILE="-I${librdf_rasqal}/include/rasqal"; + # And LO refers to gpgme++ by no-path name + NIX_CFLAGS_COMPILE="-I${librdf_rasqal}/include/rasqal -I${gpgme.dev}/include/gpgme++"; # If we call 'configure', 'make' will then call configure again without parameters. # It's their system. configureScript = "./autogen.sh"; dontUseCmakeConfigure = true; - patches = [ - ./xdg-open.patch - ]; + patches = [ ./xdg-open-brief.patch ]; postUnpack = '' mkdir -v $sourceRoot/src @@ -83,6 +83,10 @@ in stdenv.mkDerivation rec { ln -svf ${srcs.translations} $sourceRoot/src/${srcs.translations.name} ''; + postPatch = '' + sed -e 's@/usr/bin/xdg-open@xdg-open@g' -i shell/source/unix/exec/shellexec.cxx + ''; + QT4DIR = qt4; # Fix boost 1.59 compat @@ -111,7 +115,7 @@ in stdenv.mkDerivation rec { sed -e '1ilibreoffice-help-${version}.tar.xz=libreoffice-help-${version}.tar.xz' -i Makefile # unit test sd_tiledrendering seems to be fragile - # http://nabble.documentfoundation.org/libreoffice-5-0-failure-in-CUT-libreofficekit-tiledrendering-td4150319.html + # https://nabble.documentfoundation.org/libreoffice-5-0-failure-in-CUT-libreofficekit-tiledrendering-td4150319.html echo > ./sd/CppunitTest_sd_tiledrendering.mk sed -e /CppunitTest_sd_tiledrendering/d -i sd/Module_sd.mk # one more fragile test? @@ -119,11 +123,11 @@ in stdenv.mkDerivation rec { # rendering-dependent test sed -e '/CPPUNIT_ASSERT_EQUAL(11148L, pOleObj->GetLogicRect().getWidth());/d ' -i sc/qa/unit/subsequent_filters-test.cxx # tilde expansion in path processing checks the existence of $HOME - sed -e 's@rtl::OString sSysPath("~/tmp");@& return ; @' -i sal/qa/osl/file/osl_File.cxx + sed -e 's@OString sSysPath("~/tmp");@& return ; @' -i sal/qa/osl/file/osl_File.cxx # rendering-dependent: on my computer the test table actually doesn't fit… # interesting fact: test disabled on macOS by upstream sed -re '/DECLARE_WW8EXPORT_TEST[(]testTableKeep, "tdf91083.odt"[)]/,+5d' -i ./sw/qa/extras/ww8export/ww8export.cxx - # Segfault on DB access + # Segfault on DB access — maybe temporarily acceptable for a new version of Fresh? sed -e 's/CppunitTest_dbaccess_empty_stdlib_save//' -i ./dbaccess/Module_dbaccess.mk # one more fragile test? sed -e '/CPPUNIT_TEST(testTdf77014);/d' -i sw/qa/extras/uiwriter/uiwriter.cxx @@ -133,6 +137,7 @@ in stdenv.mkDerivation rec { sed -e '/CPPUNIT_TEST(testChartImportXLS)/d' -i sc/qa/unit/subsequent_filters-test.cxx sed -zre 's/DesktopLOKTest::testGetFontSubset[^{]*[{]/& return; /' -i desktop/qa/desktop_lib/test_desktop_lib.cxx sed -z -r -e 's/DECLARE_OOXMLEXPORT_TEST[(]testFlipAndRotateCustomShape,[^)]*[)].[{]/& return;/' -i sw/qa/extras/ooxmlexport/ooxmlexport7.cxx + sed -z -r -e 's/DECLARE_OOXMLEXPORT_TEST[(]tdf105490_negativeMargins,[^)]*[)].[{]/& return;/' -i sw/qa/extras/ooxmlexport/ooxmlexport9.cxx # not sure about this fragile test sed -z -r -e 's/DECLARE_OOXMLEXPORT_TEST[(]testTDF87348,[^)]*[)].[{]/& return;/' -i sw/qa/extras/ooxmlexport/ooxmlexport7.cxx ''; @@ -186,6 +191,8 @@ in stdenv.mkDerivation rec { "--disable-report-builder" "--enable-python=system" "--enable-dbus" + "--enable-release-build" + (lib.enableFeature kdeIntegration "kde4") "--with-package-format=installed" "--enable-epm" "--with-jdk-home=${jdk.home}" @@ -235,7 +242,7 @@ in stdenv.mkDerivation rec { buildInputs = with xorg; [ ant ArchiveZip autoconf automake bison boost cairo clucene_core - CompressZlib cppunit cups curl db dbus_glib expat file flex fontconfig + CompressZlib cppunit cups curl db dbus-glib expat file flex fontconfig freetype GConf getopt gnome_vfs gperf gtk3 gtk2 hunspell icu jdk lcms libcdr libexttextcat unixODBC libjpeg libmspack librdf_redland librsvg libsndfile libvisio libwpd libwpg libX11 @@ -244,11 +251,13 @@ in stdenv.mkDerivation rec { gst_all_1.gst-plugins-base glib neon nspr nss openldap openssl ORBit2 pam perl pkgconfig poppler python3 sablotron sane-backends unzip vigra which zip zlib - mdds bluez5 glibc libcmis libwps libabw libzmf - libxshmfence libatomic_ops graphite2 harfbuzz - librevenge libe-book libmwaw glm glew ncurses + mdds bluez5 glibc libcmis libwps libabw libzmf libtool + libxshmfence libatomic_ops graphite2 harfbuzz gpgme + librevenge libe-book libmwaw glm glew ncurses xmlsec epoxy libodfgen CoinMP librdf_rasqal defaultIconTheme - ]; + gdb + ] + ++ lib.optional kdeIntegration kdelibs4; nativeBuildInputs = [ wrapGAppsHook ]; passthru = { @@ -259,7 +268,7 @@ in stdenv.mkDerivation rec { meta = with lib; { description = "Comprehensive, professional-quality productivity suite (Still/stable release)"; - homepage = http://libreoffice.org/; + homepage = https://libreoffice.org/; license = licenses.lgpl3; maintainers = with maintainers; [ viric raskin ]; platforms = platforms.linux; diff --git a/pkgs/applications/office/mendeley/default.nix b/pkgs/applications/office/mendeley/default.nix index 6a741e0ab9eb..fbadd442ce7b 100644 --- a/pkgs/applications/office/mendeley/default.nix +++ b/pkgs/applications/office/mendeley/default.nix @@ -1,7 +1,7 @@ { fetchurl, stdenv, dpkg, which , makeWrapper , alsaLib -, desktop_file_utils +, desktop-file-utils , dbus , libcap , fontconfig @@ -129,7 +129,7 @@ stdenv.mkDerivation { # Patch up link handler script wrapProgram $out/bin/install-mendeley-link-handler.sh \ - --prefix PATH ':' ${stdenv.lib.makeBinPath [ which gconf desktop_file_utils ] } + --prefix PATH ':' ${stdenv.lib.makeBinPath [ which gconf desktop-file-utils ] } ''; dontStrip = true; diff --git a/pkgs/applications/office/paperwork/default.nix b/pkgs/applications/office/paperwork/default.nix index 953499c21b91..14cde8415fd7 100644 --- a/pkgs/applications/office/paperwork/default.nix +++ b/pkgs/applications/office/paperwork/default.nix @@ -1,6 +1,6 @@ { lib, python3Packages, fetchFromGitHub, gtk3, cairo , aspellDicts, buildEnv -, gnome3, hicolor_icon_theme, librsvg +, gnome3, hicolor-icon-theme, librsvg , xvfb_run, dbus, libnotify }: @@ -48,7 +48,7 @@ python3Packages.buildPythonApplication rec { checkInputs = [ xvfb_run dbus.daemon ]; buildInputs = [ - gnome3.defaultIconTheme hicolor_icon_theme libnotify librsvg + gnome3.defaultIconTheme hicolor-icon-theme libnotify librsvg ]; # A few parts of chkdeps need to have a display and a dbus session, so we not diff --git a/pkgs/applications/office/pinpoint/default.nix b/pkgs/applications/office/pinpoint/default.nix index b59d55d3ea08..680b3fd40d72 100644 --- a/pkgs/applications/office/pinpoint/default.nix +++ b/pkgs/applications/office/pinpoint/default.nix @@ -1,5 +1,5 @@ { fetchurl, stdenv, pkgconfig, autoconf, automake, clutter, clutter-gst -, gdk_pixbuf, cairo, clutter_gtk }: +, gdk_pixbuf, cairo, clutter-gtk }: stdenv.mkDerivation rec { name = "pinpoint-${version}"; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ autoconf automake clutter clutter-gst gdk_pixbuf - cairo clutter_gtk ]; + cairo clutter-gtk ]; meta = with stdenv.lib; { homepage = https://wiki.gnome.org/action/show/Apps/Pinpoint; diff --git a/pkgs/applications/office/planner/default.nix b/pkgs/applications/office/planner/default.nix index 6a43f6ea24e7..b82531ea0348 100644 --- a/pkgs/applications/office/planner/default.nix +++ b/pkgs/applications/office/planner/default.nix @@ -28,8 +28,8 @@ in stdenv.mkDerivation { autoconf libtool - gnome_common - gtk_doc + gnome-common + gtk-doc GConf gtk diff --git a/pkgs/applications/office/skrooge/default.nix b/pkgs/applications/office/skrooge/default.nix index 436644ef247f..0e0cb2ecf1d2 100644 --- a/pkgs/applications/office/skrooge/default.nix +++ b/pkgs/applications/office/skrooge/default.nix @@ -2,7 +2,7 @@ cmake, extra-cmake-modules, qtwebkit, qtscript, grantlee, kxmlgui, kwallet, kparts, kdoctools, kjobwidgets, kdesignerplugin, kiconthemes, knewstuff, sqlcipher, qca-qt5, kactivities, karchive, - kguiaddons, knotifyconfig, krunner, kwindowsystem, libofx, shared_mime_info + kguiaddons, knotifyconfig, krunner, kwindowsystem, libofx, shared-mime-info }: mkDerivation rec { @@ -15,7 +15,7 @@ mkDerivation rec { }; nativeBuildInputs = [ - cmake extra-cmake-modules kdoctools shared_mime_info + cmake extra-cmake-modules kdoctools shared-mime-info ]; buildInputs = [ diff --git a/pkgs/applications/office/spice-up/default.nix b/pkgs/applications/office/spice-up/default.nix index ddbc880690e7..e26471de5761 100644 --- a/pkgs/applications/office/spice-up/default.nix +++ b/pkgs/applications/office/spice-up/default.nix @@ -6,7 +6,7 @@ , gtk3 , granite , gnome3 -, json_glib +, json-glib , cmake , ninja , libgudev @@ -44,10 +44,10 @@ stdenv.mkDerivation rec { gtk3 granite gnome3.libgee - json_glib + json-glib libgudev libevdev - gnome3.gnome_themes_standard + gnome3.gnome-themes-standard ]; meta = with stdenv.lib; { diff --git a/pkgs/applications/office/timetrap/Gemfile.lock b/pkgs/applications/office/timetrap/Gemfile.lock index 5f451ca02b13..f71f4eaa4085 100644 --- a/pkgs/applications/office/timetrap/Gemfile.lock +++ b/pkgs/applications/office/timetrap/Gemfile.lock @@ -2,11 +2,11 @@ GEM remote: https://rubygems.org/ specs: chronic (0.10.2) - sequel (4.0.0) - sqlite3 (1.3.11) - timetrap (1.10.0) + sequel (4.43.0) + sqlite3 (1.3.13) + timetrap (1.15.1) chronic (~> 0.10.2) - sequel (~> 4.0.0) + sequel (~> 4.43.0) sqlite3 (~> 1.3.3) PLATFORMS diff --git a/pkgs/applications/office/timetrap/default.nix b/pkgs/applications/office/timetrap/default.nix index e68c753750f5..3564454a6741 100644 --- a/pkgs/applications/office/timetrap/default.nix +++ b/pkgs/applications/office/timetrap/default.nix @@ -1,14 +1,17 @@ { stdenv, lib, bundlerEnv, ruby }: -bundlerEnv { - name = "timetrap-1.10.0"; +bundlerEnv rec { + name = "timetrap-${version}"; + version = (import gemset).timetrap.version; inherit ruby; gemdir = ./.; + gemset = ./gemset.nix; - meta = { + meta = with lib; { description = "A simple command line time tracker written in ruby"; homepage = https://github.com/samg/timetrap; - license = lib.licenses.mit; + license = licenses.mit; + maintainers = [ maintainers.jerith666 ]; }; } diff --git a/pkgs/applications/office/timetrap/gemset.nix b/pkgs/applications/office/timetrap/gemset.nix index cbf90f8018ce..5764016573fc 100644 --- a/pkgs/applications/office/timetrap/gemset.nix +++ b/pkgs/applications/office/timetrap/gemset.nix @@ -10,25 +10,26 @@ sequel = { source = { remotes = ["https://rubygems.org"]; - sha256 = "17kqm0vd15p9qxbgcysvmg6a046fd7zvxl3xzpsh00pg6v454svm"; + sha256 = "121z4sq2m4vsgxwy8hs6d12cc1i4xa5rjiv0nbviyj87jldxapw0"; type = "gem"; }; - version = "4.0.0"; + version = "4.43.0"; }; sqlite3 = { source = { remotes = ["https://rubygems.org"]; - sha256 = "19r06wglnm6479ffj9dl0fa4p5j2wi6dj7k6k3d0rbx7036cv3ny"; + sha256 = "01ifzp8nwzqppda419c9wcvr8n82ysmisrs0hph9pdmv1lpa4f5i"; type = "gem"; }; - version = "1.3.11"; + version = "1.3.13"; }; timetrap = { + dependencies = ["chronic" "sequel" "sqlite3"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "1rdaa27zvdgmbsbwa59g3dvfwb95nz7x1wycmviby94j5lywyzfc"; + sha256 = "0ylaz9q99hbxnw6h1df6wphmh68fj847d1l4f9jylcx3nzzp5cyd"; type = "gem"; }; - version = "1.10.0"; + version = "1.15.1"; }; } \ No newline at end of file diff --git a/pkgs/applications/office/tryton/default.nix b/pkgs/applications/office/tryton/default.nix index 31774b6b55c1..51d5b083e6bd 100644 --- a/pkgs/applications/office/tryton/default.nix +++ b/pkgs/applications/office/tryton/default.nix @@ -4,10 +4,10 @@ with stdenv.lib; python2Packages.buildPythonApplication rec { name = "tryton-${version}"; - version = "4.2.1"; + version = "4.6.2"; src = fetchurl { url = "mirror://pypi/t/tryton/${name}.tar.gz"; - sha256 = "1ry3kvbk769m8rwqa90pplfvmmgsv4jj9w1aqhv892smia8f0ybm"; + sha256 = "0bamr040np02gfjk8c734rw3mbgg75irfgpdcl2npgkdzyw1ksf9"; }; propagatedBuildInputs = with python2Packages; [ chardet diff --git a/pkgs/applications/office/trytond/default.nix b/pkgs/applications/office/trytond/default.nix index e77287faae25..efa7f2a410d7 100644 --- a/pkgs/applications/office/trytond/default.nix +++ b/pkgs/applications/office/trytond/default.nix @@ -5,10 +5,10 @@ with stdenv.lib; python2Packages.buildPythonApplication rec { name = "trytond-${version}"; - version = "4.2.1"; + version = "4.6.2"; src = fetchurl { url = "mirror://pypi/t/trytond/${name}.tar.gz"; - sha256 = "1ijjpbsf3s0s7ksbi7xgzss4jgr14q5hqsyf6d68l8hwardrwpj7"; + sha256 = "0asc3pd37h8ky8j66iqxr0fv0k6mpjcwxwm0xgm5hrdi32l5cdda"; }; # Tells the tests which database to use diff --git a/pkgs/applications/office/tudu/default.nix b/pkgs/applications/office/tudu/default.nix index a957cd6eee68..dea3ea9731b0 100644 --- a/pkgs/applications/office/tudu/default.nix +++ b/pkgs/applications/office/tudu/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "tudu-${version}"; - version = "0.10"; + version = "0.10.2"; src = fetchurl { url = "https://code.meskio.net/tudu/${name}.tar.gz"; - sha256 = "0571wh5hn0hgadyx34zq1zi35pzd7vpwkavm7kzb9hwgn07443x4"; + sha256 = "1xsncvd1c6v8y0dzc5mspy9rrwc89pabhz6r2lihsirk83h2rqym"; }; buildInputs = [ ncurses ]; diff --git a/pkgs/applications/office/zotero/default.nix b/pkgs/applications/office/zotero/default.nix index b259623bf91e..8e2f6bce0b14 100644 --- a/pkgs/applications/office/zotero/default.nix +++ b/pkgs/applications/office/zotero/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, buildFHSUserEnv, makeDesktopItem, runCommand, bash, wrapGAppsHook, gsettings_desktop_schemas, gtk3, gnome3 }: +{ stdenv, fetchurl, buildFHSUserEnv, makeDesktopItem, runCommand, bash, wrapGAppsHook, gsettings-desktop-schemas, gtk3, gnome3 }: let version = "5.0.25"; @@ -18,7 +18,7 @@ zoteroSrc = stdenv.mkDerivation rec { sha256 = "1y3q5582xp4inpz137x0r9iscs1g0cjlqcfjpzl3klsq3yas688k"; }; - buildInputs= [ wrapGAppsHook gsettings_desktop_schemas gtk3 gnome3.adwaita-icon-theme gnome3.dconf ]; + buildInputs= [ wrapGAppsHook gsettings-desktop-schemas gtk3 gnome3.adwaita-icon-theme gnome3.dconf ]; phases = [ "unpackPhase" "installPhase" "fixupPhase"]; installPhase = '' @@ -32,7 +32,7 @@ zoteroSrc = stdenv.mkDerivation rec { fhsEnv = buildFHSUserEnv { name = "zotero-fhs-env"; targetPkgs = pkgs: with pkgs; with xlibs; [ - gtk3 dbus_glib + gtk3 dbus-glib libXt nss ]; }; diff --git a/pkgs/applications/science/astronomy/gpredict/default.nix b/pkgs/applications/science/astronomy/gpredict/default.nix index 148963d64c08..96e8e0d2d250 100644 --- a/pkgs/applications/science/astronomy/gpredict/default.nix +++ b/pkgs/applications/science/astronomy/gpredict/default.nix @@ -1,20 +1,19 @@ -{ stdenv, fetchurl, pkgconfig -, gtk2-x11, glib, curl, goocanvas, intltool +{ stdenv, fetchurl, pkgconfig, intltool +, gtk3, glib, curl, goocanvas2, gpsd }: let - version = "1.3"; -in -stdenv.mkDerivation { + version = "2.2.1"; +in stdenv.mkDerivation { name = "gpredict-${version}"; src = fetchurl { - url = "https://sourceforge.net/projects/gpredict/files/Gpredict/${version}/gpredict-${version}.tar.gz"; - sha256 = "18ym71r2f5mwpnjcnrpwrk3py2f6jlqmj8hzp89wbcm1ipnvxxmh"; + url = "https://github.com/csete/gpredict/releases/download/v${version}/gpredict-${version}.tar.bz2"; + sha256 = "0hwf97kng1zy8rxyglw04x89p0bg07zq30hgghm20yxiw2xc8ng7"; }; - buildInputs = [ curl glib gtk2-x11 goocanvas ]; nativeBuildInputs = [ pkgconfig intltool ]; + buildInputs = [ curl glib gtk3 goocanvas2 gpsd ]; meta = with stdenv.lib; { description = "Real time satellite tracking and orbit prediction"; @@ -27,7 +26,7 @@ stdenv.mkDerivation { ''; license = licenses.gpl2; platforms = platforms.linux; - homepage = "https://sourceforge.net/projects/gpredict/"; + homepage = http://gpredict.oz9aec.net/; maintainers = [ maintainers.markuskowa ]; }; } diff --git a/pkgs/applications/science/biology/bcftools/default.nix b/pkgs/applications/science/biology/bcftools/default.nix index db12fc00c87c..5e899568a7df 100644 --- a/pkgs/applications/science/biology/bcftools/default.nix +++ b/pkgs/applications/science/biology/bcftools/default.nix @@ -3,11 +3,11 @@ stdenv.mkDerivation rec { name = "${pname}-${version}"; pname = "bcftools"; - version = "1.6"; + version = "1.7"; src = fetchurl { url = "https://github.com/samtools/bcftools/releases/download/${version}/${name}.tar.bz2"; - sha256 = "10prgmf09a13mk18840938ijqgfc9y92hfc7sa2gcv07ddri0c19"; + sha256 = "1l82sgw86l1626b7kxv3h0696lbj7317bb48rvqb1zqd3gcn6kyx"; }; nativeBuildInputs = [ perl ]; diff --git a/pkgs/applications/science/biology/bowtie2/default.nix b/pkgs/applications/science/biology/bowtie2/default.nix index f04b81ea9795..829672d64cc2 100644 --- a/pkgs/applications/science/biology/bowtie2/default.nix +++ b/pkgs/applications/science/biology/bowtie2/default.nix @@ -2,14 +2,14 @@ stdenv.mkDerivation rec { pname = "bowtie2"; - version = "2.3.4"; + version = "2.3.4.1"; name = "${pname}-${version}"; src = fetchFromGitHub { owner = "BenLangmead"; repo = pname; rev = "v${version}"; - sha256 = "15k86ln1xgqkyk8ms09cgdhagz49jpvr6ij6mha1f9ga5fxnnp1m"; + sha256 = "07cvcy6483araayj41arjzpxjmf4fmn4iqyl6gp6zmrbzw72wwzj"; }; buildInputs = [ zlib tbb ]; diff --git a/pkgs/applications/science/biology/igv/default.nix b/pkgs/applications/science/biology/igv/default.nix index 13cb407391c0..7825da0100ad 100644 --- a/pkgs/applications/science/biology/igv/default.nix +++ b/pkgs/applications/science/biology/igv/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "igv-${version}"; - version = "2.4.6"; + version = "2.4.8"; src = fetchurl { url = "http://data.broadinstitute.org/igv/projects/downloads/2.4/IGV_${version}.zip"; - sha256 = "00p9xhfn6snzm31q9l3dxccsj7rhlci8n3pgpy3k67q91mi2hkna"; + sha256 = "1ca4lsb5j00066sd1gy8jr8jhzpd9142fhj4khb8nc45010wib0q"; }; buildInputs = [ unzip jre ]; diff --git a/pkgs/applications/science/biology/picard-tools/default.nix b/pkgs/applications/science/biology/picard-tools/default.nix index 5578a41f4441..a065fdf4489a 100644 --- a/pkgs/applications/science/biology/picard-tools/default.nix +++ b/pkgs/applications/science/biology/picard-tools/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "picard-tools-${version}"; - version = "2.17.4"; + version = "2.17.10"; src = fetchurl { url = "https://github.com/broadinstitute/picard/releases/download/${version}/picard.jar"; - sha256 = "00ffi8kkrlh72vjjkjpgi8zys3r9hkdk4xi82kcahch8pix4qzf2"; + sha256 = "0lf9appcs66mxmirzbys09xhq38kpa4ldxwwzrr9y2cklnxjn4hg"; }; buildInputs = [ jre makeWrapper ]; diff --git a/pkgs/applications/science/electronics/pcb/default.nix b/pkgs/applications/science/electronics/pcb/default.nix index 6b792310e8b4..b540df816eef 100644 --- a/pkgs/applications/science/electronics/pcb/default.nix +++ b/pkgs/applications/science/electronics/pcb/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, gtk2, bison, intltool, flex, netpbm, imagemagick, dbus, xlibsWrapper, mesa, shared_mime_info, tcl, tk, gnome2, pangox_compat, gd, xorg }: +{ stdenv, fetchurl, pkgconfig, gtk2, bison, intltool, flex, netpbm, imagemagick, dbus, xlibsWrapper, mesa, shared-mime-info, tcl, tk, gnome2, pangox_compat, gd, xorg }: stdenv.mkDerivation rec { name = "pcb-${version}"; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ gtk2 bison intltool flex netpbm imagemagick dbus xlibsWrapper mesa tcl shared_mime_info tk gnome2.gtkglext pangox_compat gd xorg.libXmu ]; + buildInputs = [ gtk2 bison intltool flex netpbm imagemagick dbus xlibsWrapper mesa tcl shared-mime-info tk gnome2.gtkglext pangox_compat gd xorg.libXmu ]; configureFlags = ["--disable-update-desktop-database"]; diff --git a/pkgs/applications/science/electronics/verilator/default.nix b/pkgs/applications/science/electronics/verilator/default.nix index e34383865576..dade8296e996 100644 --- a/pkgs/applications/science/electronics/verilator/default.nix +++ b/pkgs/applications/science/electronics/verilator/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "verilator-${version}"; - version = "3.900"; + version = "3.920"; src = fetchurl { url = "http://www.veripool.org/ftp/${name}.tgz"; - sha256 = "0yvbibcysdiw6mphda0lfs56wz6v450px2420x0hbd3rc7k53s2b"; + sha256 = "1zs3d6h5sbz455fwpgg89h81hkfn92ary8bmhjinc1rd8fm3hp1b"; }; enableParallelBuilding = true; diff --git a/pkgs/applications/science/logic/cryptoverif/default.nix b/pkgs/applications/science/logic/cryptoverif/default.nix index 47077c2e255b..3257977f5b5a 100644 --- a/pkgs/applications/science/logic/cryptoverif/default.nix +++ b/pkgs/applications/science/logic/cryptoverif/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "cryptoverif-${version}"; - version = "1.22"; + version = "1.28"; src = fetchurl { url = "http://prosecco.gforge.inria.fr/personal/bblanche/cryptoverif/cryptoverif${version}.tar.gz"; - sha256 = "17fbmv0askgfnhs5a0ilhizvrr93jkmq82ybm3cgyxhh2zrk0rq1"; + sha256 = "0vssz751g1nn8wclkiwgghpm475jl00xkivc164vgbr9acxsr7n7"; }; buildInputs = [ ocaml ]; diff --git a/pkgs/applications/science/math/caffe/default.nix b/pkgs/applications/science/math/caffe/default.nix index 8dc3e3ce43dc..d7357c5048d5 100644 --- a/pkgs/applications/science/math/caffe/default.nix +++ b/pkgs/applications/science/math/caffe/default.nix @@ -7,17 +7,19 @@ , hdf5-cpp , leveldb , lmdb -, opencv +, opencv3 , protobuf , snappy -, atlas , doxygen +, openblas , cudaSupport ? true, cudatoolkit , cudnnSupport ? false, cudnn ? null +, ncclSupport ? false, nccl ? null , pythonSupport ? false, python ? null, numpy ? null }: assert cudnnSupport -> cudaSupport; +assert ncclSupport -> cudaSupport; assert pythonSupport -> (python != null && numpy != null); stdenv.mkDerivation rec { @@ -35,14 +37,19 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake doxygen ]; - cmakeFlags = [ - "-DCUDA_ARCH_NAME=All" - (if pythonSupport then "-Dpython_version=${python.version}" else "-DBUILD_python=OFF") - ] ++ lib.optional (!cudaSupport) "-DCPU_ONLY=ON"; + cmakeFlags = + [ (if pythonSupport then "-Dpython_version=${python.version}" else "-DBUILD_python=OFF") + "-DBLAS=open" + ] ++ (if cudaSupport then [ + "-DCUDA_ARCH_NAME=All" + "-DCUDA_HOST_COMPILER=${cudatoolkit.cc}/bin/cc" + ] else [ "-DCPU_ONLY=ON" ]) + ++ lib.optional ncclSupport "-DUSE_NCCL=ON"; - buildInputs = [ boost google-gflags glog protobuf hdf5-cpp lmdb leveldb snappy opencv atlas ] + buildInputs = [ boost google-gflags glog protobuf hdf5-cpp lmdb leveldb snappy opencv3 openblas ] ++ lib.optional cudaSupport cudatoolkit ++ lib.optional cudnnSupport cudnn + ++ lib.optional ncclSupport nccl ++ lib.optionals pythonSupport [ python numpy ]; propagatedBuildInputs = lib.optional pythonSupport python.pkgs.protobuf; diff --git a/pkgs/applications/science/math/cbc/default.nix b/pkgs/applications/science/math/cbc/default.nix index 7643c912db4b..6de77d81be6f 100644 --- a/pkgs/applications/science/math/cbc/default.nix +++ b/pkgs/applications/science/math/cbc/default.nix @@ -1,11 +1,11 @@ { lib, stdenv, fetchurl, zlib, bzip2 }: stdenv.mkDerivation { - name = "cbc-2.9.5"; + name = "cbc-2.9.9"; src = fetchurl { - url = "http://www.coin-or.org/download/source/Cbc/Cbc-2.9.5.tgz"; - sha256 = "0kmsg9qpajh5jhnql04m6akpdjzlppxfz99q320vw5bkzgl3i18w"; + url = "http://www.coin-or.org/download/source/Cbc/Cbc-2.9.9.tgz"; + sha256 = "1w8axdzm05xf5y13c31w7rc5z6ywxqxiwafnxcq3p195kgj0915a"; }; configureFlags = "-C"; diff --git a/pkgs/applications/science/math/cntk/default.nix b/pkgs/applications/science/math/cntk/default.nix index bef695fc650a..07740f4c8aea 100644 --- a/pkgs/applications/science/math/cntk/default.nix +++ b/pkgs/applications/science/math/cntk/default.nix @@ -12,28 +12,22 @@ let cub = fetchFromGitHub { owner = "NVlabs"; repo = "cub"; - rev = "1.4.1"; - sha256 = "1lcdwblz03c0yq1lxndg566kg14b5qm14x5qixjbmz6wq85kgmqc"; + rev = "1.7.4"; + sha256 = "0ksd5n1lxqhm5l5cd2lps4cszhjkf6gmzahaycs7nxb06qci8c66"; }; in stdenv.mkDerivation rec { name = "CNTK-${version}"; - version = "2.2"; + version = "2.4"; # Submodules src = fetchgit { url = "https://github.com/Microsoft/CNTK"; rev = "v${version}"; - sha256 = "0q4knrwiyphb2fbqf9jzqvkz2jzj6jmbmang3lavdvsh7z0n8zz9"; + sha256 = "0m28wb0ljixcpi14g3gcfiraimh487yxqhd9yrglgyvjb69x597y"; }; - patches = [ - # Fix "'exp' was not declared" - (fetchpatch { - url = "https://github.com/imriss/CNTK/commit/ef1cca6df95cc507deb8471df2c0dd8cbfeef23b.patch"; - sha256 = "0z7xyrxwric0c4h7rfs05f544mcq6d10wgs0vvfcyd2pcf410hy7"; - }) - ]; + patches = [ ./fix_std_bind.patch ]; nativeBuildInputs = [ cmake ]; @@ -48,8 +42,10 @@ in stdenv.mkDerivation rec { "--with-boost=${boost.dev}" "--with-protobuf=${protobuf}" "--with-mpi=${openmpi}" + "--cuda=${if cudaSupport then "yes" else "no"}" + # FIXME + "--asgd=no" ] ++ lib.optionals cudaSupport [ - "--cuda=yes" "--with-cuda=${cudatoolkit}" "--with-gdk-include=${cudatoolkit}/include" "--with-gdk-nvml-lib=${nvidia_x11}/lib" @@ -85,16 +81,12 @@ in stdenv.mkDerivation rec { cp bin/cntk $out/bin ''; - hardeningDisable = [ "format" ]; - - # on 2.2: fatal error: tensorboard/tensorboard.pb.h: No such file or directory - enableParallelBuilding = false; + enableParallelBuilding = true; meta = with lib; { - homepage = "https://github.com/Microsoft/CNTK"; + homepage = https://github.com/Microsoft/CNTK; description = "An open source deep-learning toolkit"; license = if onebitSGDSupport then licenses.unfreeRedistributable else licenses.mit; maintainers = with maintainers; [ abbradar ]; - broken = true; # Never succeeded to build. }; } diff --git a/pkgs/applications/science/math/cntk/fix_std_bind.patch b/pkgs/applications/science/math/cntk/fix_std_bind.patch new file mode 100644 index 000000000000..df97a0c66669 --- /dev/null +++ b/pkgs/applications/science/math/cntk/fix_std_bind.patch @@ -0,0 +1,11 @@ +diff -ru3 CNTK-old/Source/CNTKv2LibraryDll/EvaluatorWrapper.h CNTK-new/Source/CNTKv2LibraryDll/EvaluatorWrapper.h +--- CNTK-old/Source/CNTKv2LibraryDll/EvaluatorWrapper.h 1970-01-01 03:00:01.000000000 +0300 ++++ CNTK-new/Source/CNTKv2LibraryDll/EvaluatorWrapper.h 2018-02-25 18:16:16.330269647 +0300 +@@ -9,6 +9,7 @@ + #include + #include + #include ++#include + + #include "CNTKLibrary.h" + #include "CNTKLibraryC.h" diff --git a/pkgs/applications/science/math/fricas/default.nix b/pkgs/applications/science/math/fricas/default.nix index ccdd666e90bd..7e5233180cc6 100644 --- a/pkgs/applications/science/math/fricas/default.nix +++ b/pkgs/applications/science/math/fricas/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, sbcl, libX11, libXpm, libICE, libSM, libXt, libXau, libXdmcp }: let - version = "1.3.1"; + version = "1.3.2"; name = "fricas-" + version; in stdenv.mkDerivation { @@ -9,7 +9,7 @@ stdenv.mkDerivation { src = fetchurl { url = "http://sourceforge.net/projects/fricas/files/fricas/${version}/${name}-full.tar.bz2"; - sha256 = "0c2wgj1c3mh5f8msx1ckxpnhm0dyq7dqf1wk6aiyysh8xn57cjkx"; + sha256 = "17a3vfvsn2idydqslf5r6z3sk6a5bdgj6z1n3dmnwmpkc4z152vr"; }; buildInputs = [ sbcl libX11 libXpm libICE libSM libXt libXau libXdmcp ]; diff --git a/pkgs/applications/science/math/lp_solve/default.nix b/pkgs/applications/science/math/lp_solve/default.nix index efa0c1751d4c..0cf834c8cdea 100644 --- a/pkgs/applications/science/math/lp_solve/default.nix +++ b/pkgs/applications/science/math/lp_solve/default.nix @@ -3,11 +3,11 @@ stdenv.mkDerivation rec { name = "lp_solve-${version}"; - version = "5.5.2.0"; + version = "5.5.2.5"; src = fetchurl { url = "mirror://sourceforge/project/lpsolve/lpsolve/${version}/lp_solve_${version}_source.tar.gz"; - sha256 = "176c7f023mb6b8bfmv4rfqnrlw88lsg422ca74zjh19i2h5s69sq"; + sha256 = "12pj1idjz31r7c2mb5w03vy1cmvycvbkx9z29s40qdmkp1i7q6i0"; }; patches = [ ./isnan.patch ]; diff --git a/pkgs/applications/science/math/mxnet/default.nix b/pkgs/applications/science/math/mxnet/default.nix index d2f3d0c5f337..ce9c214b3f0c 100644 --- a/pkgs/applications/science/math/mxnet/default.nix +++ b/pkgs/applications/science/math/mxnet/default.nix @@ -8,7 +8,7 @@ assert cudnnSupport -> cudaSupport; stdenv.mkDerivation rec { name = "mxnet-${version}"; - version = "0.11.0"; + version = "1.1.0"; # Submodules needed src = fetchgit { @@ -23,9 +23,12 @@ stdenv.mkDerivation rec { ++ lib.optionals cudaSupport [ cudatoolkit nvidia_x11 ] ++ lib.optional cudnnSupport cudnn; - cmakeFlags = [ - (if cudaSupport then "-DCUDA_ARCH_NAME=All" else "-DUSE_CUDA=OFF") - ] ++ lib.optional (!cudnnSupport) "-DUSE_CUDNN=OFF"; + cmakeFlags = + (if cudaSupport then [ + "-DCUDA_ARCH_NAME=All" + "-DCUDA_HOST_COMPILER=${cudatoolkit.cc}/bin/cc" + ] else [ "-DUSE_CUDA=OFF" ]) + ++ lib.optional (!cudnnSupport) "-DUSE_CUDNN=OFF"; installPhase = '' install -Dm755 libmxnet.so $out/lib/libmxnet.so @@ -36,7 +39,7 @@ stdenv.mkDerivation rec { meta = with stdenv.lib; { description = "Lightweight, Portable, Flexible Distributed/Mobile Deep Learning with Dynamic, Mutation-aware Dataflow Dep Scheduler"; - homepage = "https://mxnet.incubator.apache.org/"; + homepage = https://mxnet.incubator.apache.org/; maintainers = with maintainers; [ abbradar ]; license = licenses.asl20; platforms = platforms.linux; diff --git a/pkgs/applications/science/math/pari/default.nix b/pkgs/applications/science/math/pari/default.nix index 0bae80782059..a1ddbd9ab17d 100644 --- a/pkgs/applications/science/math/pari/default.nix +++ b/pkgs/applications/science/math/pari/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { name = "pari-${version}"; - version = "2.9.3"; + version = "2.9.4"; src = fetchurl { url = "http://pari.math.u-bordeaux.fr/pub/pari/unix/${name}.tar.gz"; - sha256 = "0qqal1lpggd6dvs19svnz0dil86xk0xkcj5s3b7104ibkmvjfsp7"; + sha256 = "0ir6m3a8r46md5x6zk4xf159qra7aqparby9zk03k81hjrrxr72g"; }; buildInputs = [ gmp readline libX11 libpthreadstubs tex perl ]; diff --git a/pkgs/applications/science/math/qalculate-gtk/default.nix b/pkgs/applications/science/math/qalculate-gtk/default.nix index 278194d57fa4..b02a65532577 100644 --- a/pkgs/applications/science/math/qalculate-gtk/default.nix +++ b/pkgs/applications/science/math/qalculate-gtk/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "qalculate-gtk-${version}"; - version = "2.1.0"; + version = "2.2.1"; src = fetchurl { url = "https://github.com/Qalculate/qalculate-gtk/archive/v${version}.tar.gz"; - sha256 = "14q89l6laa7v7d9qx7v71a0r2m65saxqgr9r871fasm400a9x8pw"; + sha256 = "0sf4ywz8hsszaf0yr0ncdlp7mwjk6b276bwl0j9vf1j925c89pbn"; }; patchPhase = '' diff --git a/pkgs/applications/science/math/sage/default.nix b/pkgs/applications/science/math/sage/default.nix index ee646fee2c25..007cb68177e5 100644 --- a/pkgs/applications/science/math/sage/default.nix +++ b/pkgs/applications/science/math/sage/default.nix @@ -21,7 +21,7 @@ , bash , fetchurl , perl -, gfortran +, gfortran6 , python , autoreconfHook , gettext @@ -94,13 +94,13 @@ stdenv.mkDerivation rec { bash # needed for the build perl # needed for the build python # needed for the build - gfortran # needed to build giac, openblas + gfortran6 # needed to build giac, openblas autoreconfHook # needed to configure sage with prefix gettext # needed to build the singular spkg - hevea # needed to build the docs of the giac spkg which # needed in configure of mpir - # needed to build the docs of the giac spkg texinfo # needed to build maxima + ] ++ stdenv.lib.optionals(buildDocs) [ + hevea # needed to build the docs of the giac spkg (texlive.combine { inherit (texlive) scheme-basic collection-pstricks # needed by giac @@ -111,7 +111,7 @@ stdenv.mkDerivation rec { }) ]; - nativeBuildInputs = [ gfortran perl which ]; + nativeBuildInputs = [ gfortran6 perl which ]; patches = [ # fix usages of /bin/rm @@ -153,13 +153,13 @@ stdenv.mkDerivation rec { cd .. mv "$dir" "$out/sage-root" + export SAGE_SPKG_INSTALL_DOCS='no' cd "$out/sage-root" # build in target dir, since `make` is also `make install` '' + stdenv.lib.optionalString (buildDocs) '' mkdir -p "$doc" export SAGE_DOC="$doc" export SAGE_DOCBUILD_OPTS="--no-pdf-links -k" - export SAGE_SPKG_INSTALL_DOCS='no' ''; buildFlags = if (buildDocs) then "doc" else "build"; @@ -191,6 +191,13 @@ stdenv.mkDerivation rec { rm -f "$out/sage-root/config.status" rm -f "$out/sage-root/build/make/Makefile-auto" rm -f "$out/sage-home/.sage/gap/libgap-workspace-"* + # Make sure unnessessary packages don't end up in the build closure + find "$out" \ + -iname 'config.log' \ + -delete \ + -or -iname 'Makefile' \ + -delete + rm -f "$out/lib/R/etc/Renviron" # Make sure all shebangs are properly patched bash $patchSageShebangs $out ''; diff --git a/pkgs/applications/science/math/wxmaxima/default.nix b/pkgs/applications/science/math/wxmaxima/default.nix index c7f74071c24f..67cdaa4055ac 100644 --- a/pkgs/applications/science/math/wxmaxima/default.nix +++ b/pkgs/applications/science/math/wxmaxima/default.nix @@ -4,13 +4,13 @@ stdenv.mkDerivation rec { name = "wxmaxima-${version}"; - version = "17.10.1"; + version = "18.02.0"; src = fetchFromGitHub { owner = "andrejv"; repo = "wxmaxima"; rev = "Version-${version}"; - sha256 = "088h8dlc9chkppwl4ck9i0fgf2d1dcpi5kq8qbpr5w75vhwsb6qm"; + sha256 = "0s7bdykc77slqix28cyaa6x8wvxrn8461mkdgxflvi2apwsl56aa"; }; buildInputs = [ wxGTK maxima gnome3.defaultIconTheme ]; diff --git a/pkgs/applications/science/misc/tulip/default.nix b/pkgs/applications/science/misc/tulip/default.nix index 9b8035fcefe7..af58aaafc9c9 100644 --- a/pkgs/applications/science/misc/tulip/default.nix +++ b/pkgs/applications/science/misc/tulip/default.nix @@ -1,13 +1,13 @@ { fetchurl, stdenv, libxml2, freetype, mesa, glew, qt4 , cmake, makeWrapper, libjpeg, python }: -let version = "4.9.0"; in +let version = "5.1.0"; in stdenv.mkDerivation rec { name = "tulip-${version}"; src = fetchurl { url = "mirror://sourceforge/auber/${name}_src.tar.gz"; - sha256 = "0phc7972brvm0v6lfk4ghq9b2b4jsj6c15xlbgnvhhcxhc99wba3"; + sha256 = "1i70y8b39gkpxfalr9844pa3l4bnnyw5y7ngxdqibil96k2b9q9h"; }; buildInputs = [ libxml2 freetype glew mesa qt4 libjpeg python ]; diff --git a/pkgs/applications/search/catfish/default.nix b/pkgs/applications/search/catfish/default.nix index c355b193dfd1..79af80ea75f5 100644 --- a/pkgs/applications/search/catfish/default.nix +++ b/pkgs/applications/search/catfish/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, file, which, intltool, gobjectIntrospection, - findutils, xdg_utils, gnome3, pythonPackages, hicolor_icon_theme, + findutils, xdg_utils, gnome3, pythonPackages, hicolor-icon-theme, wrapGAppsHook }: @@ -29,7 +29,7 @@ pythonPackages.buildPythonApplication rec { pythonPackages.pyxdg pythonPackages.ptyprocess pythonPackages.pycairo - hicolor_icon_theme + hicolor-icon-theme ]; propagatedBuildInputs = [ diff --git a/pkgs/applications/search/recoll/default.nix b/pkgs/applications/search/recoll/default.nix index 01669f3fd409..ade8af254496 100644 --- a/pkgs/applications/search/recoll/default.nix +++ b/pkgs/applications/search/recoll/default.nix @@ -7,45 +7,54 @@ assert stdenv.system != "powerpc-linux"; stdenv.mkDerivation rec { - ver = "1.23.5"; + ver = "1.23.7"; name = "recoll-${ver}"; src = fetchurl { url = "http://www.lesbonscomptes.com/recoll/${name}.tar.gz"; - sha256 = "0ps7ckrv63ydviqkqxs57hn04z53s2jnjnp94n1prs63xx0njswv"; + sha256 = "186bj8zx2xw9hwrzvzxdgdin9nj7msiqh5j57w5g7j4abdlsisjn"; }; - configureFlags = [ "--with-inotify" ]; + configureFlags = [ "--enable-recollq" ] ++ + (if stdenv.isLinux then [ "--with-inotify" ] else [ "--without-inotify" ]); - buildInputs = [ qt4 xapian file python bison]; + buildInputs = [ qt4 xapian file python bison ]; + + patchPhase = stdenv.lib.optionalString stdenv.isDarwin '' + sed -i 's/-Wl,--no-undefined -Wl,--warn-unresolved-symbols//' Makefile.am + sed -i 's/-Wl,--no-undefined -Wl,--warn-unresolved-symbols//' Makefile.in + ''; # the filters search through ${PATH} using a sh proc 'checkcmds' for the # filtering utils. Short circuit this by replacing the filtering command with # the absolute path to the filtering command. postInstall = '' for f in $out/share/recoll/filters/* ; do - substituteInPlace $f --replace antiword ${lib.getBin antiword}/bin/antiword - substituteInPlace $f --replace awk ${lib.getBin gawk}/bin/awk - substituteInPlace $f --replace catppt ${lib.getBin catdoc}/bin/catppt - substituteInPlace $f --replace djvused ${lib.getBin djvulibre}/bin/djvused - substituteInPlace $f --replace djvutxt ${lib.getBin djvulibre}/bin/djvutxt - substituteInPlace $f --replace egrep ${lib.getBin gnugrep}/bin/egrep - substituteInPlace $f --replace groff ${lib.getBin groff}/bin/groff - substituteInPlace $f --replace gunzip ${lib.getBin gzip}/bin/gunzip - substituteInPlace $f --replace iconv ${lib.getBin libiconv}/bin/iconv - substituteInPlace $f --replace lyx ${lib.getBin lyx}/bin/lyx - substituteInPlace $f --replace pdftotext ${lib.getBin poppler_utils}/bin/pdftotext - substituteInPlace $f --replace pstotext ${lib.getBin ghostscript}/bin/ps2ascii - substituteInPlace $f --replace sed ${lib.getBin gnused}/bin/sed - substituteInPlace $f --replace tar ${lib.getBin gnutar}/bin/tar - substituteInPlace $f --replace unzip ${lib.getBin unzip}/bin/unzip - substituteInPlace $f --replace xls2csv ${lib.getBin catdoc}/bin/xls2csv - substituteInPlace $f --replace xsltproc ${lib.getBin libxslt}/bin/xsltproc - substituteInPlace $f --replace unrtf ${lib.getBin unrtf}/bin/unrtf - substituteInPlace $f --replace untex ${lib.getBin untex}/bin/untex - substituteInPlace $f --replace wpd2html ${lib.getBin libwpd}/bin/wpd2html - substituteInPlace $f --replace /usr/bin/perl ${lib.getBin perl}/bin/perl + if [[ ! "$f" =~ \.zip$ ]]; then + substituteInPlace $f --replace '"antiword"' '"${lib.getBin antiword}/bin/antiword"' + substituteInPlace $f --replace '"awk"' '"${lib.getBin gawk}/bin/awk"' + substituteInPlace $f --replace '"catppt"' '"${lib.getBin catdoc}/bin/catppt"' + substituteInPlace $f --replace '"djvused"' '"${lib.getBin djvulibre}/bin/djvused"' + substituteInPlace $f --replace '"djvutxt"' '"${lib.getBin djvulibre}/bin/djvutxt"' + substituteInPlace $f --replace '"egrep"' '"${lib.getBin gnugrep}/bin/egrep"' + substituteInPlace $f --replace '"groff"' '"${lib.getBin groff}/bin/groff"' + substituteInPlace $f --replace '"gunzip"' '"${lib.getBin gzip}/bin/gunzip"' + substituteInPlace $f --replace '"iconv"' '"${lib.getBin libiconv}/bin/iconv"' + substituteInPlace $f --replace '"pdftotext"' '"${lib.getBin poppler_utils}/bin/pdftotext"' + substituteInPlace $f --replace '"pstotext"' '"${lib.getBin ghostscript}/bin/ps2ascii"' + substituteInPlace $f --replace '"sed"' '"${lib.getBin gnused}/bin/sed"' + substituteInPlace $f --replace '"tar"' '"${lib.getBin gnutar}/bin/tar"' + substituteInPlace $f --replace '"unzip"' '"${lib.getBin unzip}/bin/unzip"' + substituteInPlace $f --replace '"xls2csv"' '"${lib.getBin catdoc}/bin/xls2csv"' + substituteInPlace $f --replace '"xsltproc"' '"${lib.getBin libxslt}/bin/xsltproc"' + substituteInPlace $f --replace '"unrtf"' '"${lib.getBin unrtf}/bin/unrtf"' + substituteInPlace $f --replace '"untex"' '"${lib.getBin untex}/bin/untex"' + substituteInPlace $f --replace '"wpd2html"' '"${lib.getBin libwpd}/bin/wpd2html"' + substituteInPlace $f --replace /usr/bin/perl ${lib.getBin perl}/bin/perl + fi done + '' + stdenv.lib.optionalString stdenv.isLinux '' + substituteInPlace $f --replace '"lyx"' '"${lib.getBin lyx}/bin/lyx"' ''; enableParallelBuilding = true; diff --git a/pkgs/applications/version-management/fossil/default.nix b/pkgs/applications/version-management/fossil/default.nix index 80c4401f1708..cadc72f0f87b 100644 --- a/pkgs/applications/version-management/fossil/default.nix +++ b/pkgs/applications/version-management/fossil/default.nix @@ -3,7 +3,7 @@ stdenv.mkDerivation rec { name = "fossil-${version}"; - version = "2.3"; + version = "2.5"; src = fetchurl { urls = @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { "https://www.fossil-scm.org/index.html/uv/fossil-src-${version}.tar.gz" ]; name = "${name}.tar.gz"; - sha256 = "0paalvb4rdyr79v6rwspaha5n4dqb92df9irijha13m3apsanwzh"; + sha256 = "1lxawkhr1ki9fqw8076fxib2b1w673449yzb6vxjshqzh5h77c7r"; }; buildInputs = [ zlib openssl readline sqlite which ed ] diff --git a/pkgs/applications/version-management/git-and-tools/svn2git/default.nix b/pkgs/applications/version-management/git-and-tools/svn2git/default.nix index d613e97d550c..d00fdd0c29e0 100644 --- a/pkgs/applications/version-management/git-and-tools/svn2git/default.nix +++ b/pkgs/applications/version-management/git-and-tools/svn2git/default.nix @@ -1,14 +1,14 @@ { stdenv, fetchurl, ruby, makeWrapper, git }: let - version = "2.3.2"; + version = "2.4.0"; in stdenv.mkDerivation { name = "svn2git-${version}"; src = fetchurl { url = "https://github.com/nirvdrum/svn2git/archive/v${version}.tar.gz"; - sha256 = "1484mpcabqf9kr6xdpdgb1npkqav1bcah3w5lxj2djjx4bjf2g3y"; + sha256 = "0ly2vrv6q31n0xhciwb7a1ilr5c6ndyi3bg81yfp4axiypps7l41"; }; buildInputs = [ ruby makeWrapper ]; diff --git a/pkgs/applications/version-management/git-and-tools/tig/default.nix b/pkgs/applications/version-management/git-and-tools/tig/default.nix index 07ea2be7ad34..597429c0cc7a 100644 --- a/pkgs/applications/version-management/git-and-tools/tig/default.nix +++ b/pkgs/applications/version-management/git-and-tools/tig/default.nix @@ -4,14 +4,14 @@ stdenv.mkDerivation rec { pname = "tig"; - version = "2.3.2"; + version = "2.3.3"; name = "${pname}-${version}"; src = fetchFromGitHub { owner = "jonas"; repo = pname; rev = name; - sha256 = "14cdlrdxbl8vzqw86fm3wyaixh607z47shc4dwd6rd9vj05w0m97"; + sha256 = "1gw5ia6cl5b0q91kv4vfg35my2p49np23aikxqf5gn00zhqrkfap"; }; nativeBuildInputs = [ makeWrapper autoreconfHook asciidoc xmlto docbook_xsl docbook_xml_dtd_45 findXMLCatalogs pkgconfig ]; diff --git a/pkgs/applications/version-management/git-and-tools/transcrypt/default.nix b/pkgs/applications/version-management/git-and-tools/transcrypt/default.nix index 6238cf9c9754..d04f0d5792b2 100644 --- a/pkgs/applications/version-management/git-and-tools/transcrypt/default.nix +++ b/pkgs/applications/version-management/git-and-tools/transcrypt/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "transcrypt-${version}"; - version = "1.0.2"; + version = "1.0.3"; src = fetchFromGitHub { owner = "elasticdog"; repo = "transcrypt"; rev = "v${version}"; - sha256 = "05q0rgcsphrkavmcsm3qghsl1pkgshvhdf6zpwkn1qcj288h8gkc"; + sha256 = "1hvg4ipsxm27n5yn5jpk43qyvvx5gx3z3cczw1z3r6hrs4n8d5rz"; }; buildInputs = [ git makeWrapper openssl ]; diff --git a/pkgs/applications/version-management/gitkraken/default.nix b/pkgs/applications/version-management/gitkraken/default.nix index c7f7a4b02e4d..93b96dd87460 100644 --- a/pkgs/applications/version-management/gitkraken/default.nix +++ b/pkgs/applications/version-management/gitkraken/default.nix @@ -1,4 +1,4 @@ -{ stdenv, lib, libXcomposite, libgnome_keyring, makeWrapper, udev, curl, alsaLib +{ stdenv, lib, libXcomposite, libgnome-keyring, makeWrapper, udev, curl, alsaLib , libXfixes, atk, gtk2, libXrender, pango, gnome2, cairo, freetype, fontconfig , libX11, libXi, libXext, libXcursor, glib, libXScrnSaver, libxkbfile, libXtst , nss, nspr, cups, fetchurl, expat, gdk_pixbuf, libXdamage, libXrandr, dbus @@ -47,7 +47,7 @@ stdenv.mkDerivation rec { libXrender gtk2 gnome2.GConf - libgnome_keyring + libgnome-keyring ]; nativeBuildInputs = [ makeWrapper ]; @@ -84,7 +84,7 @@ stdenv.mkDerivation rec { --set-rpath "$libPath:$out/opt/gitkraken" "$out/opt/gitkraken/gitkraken" wrapProgram $out/opt/gitkraken/gitkraken \ --prefix LD_PRELOAD : "${makeLibraryPath [ curl ]}/libcurl.so.4" \ - --prefix LD_PRELOAD : "${makeLibraryPath [ libgnome_keyring ]}/libgnome-keyring.so.0" + --prefix LD_PRELOAD : "${makeLibraryPath [ libgnome-keyring ]}/libgnome-keyring.so.0" mkdir "$out/bin" ln -s "$out/opt/gitkraken/gitkraken" "$out/bin/gitkraken" ''; diff --git a/pkgs/applications/version-management/meld/default.nix b/pkgs/applications/version-management/meld/default.nix index d5bd24cf9382..18e986e437f6 100644 --- a/pkgs/applications/version-management/meld/default.nix +++ b/pkgs/applications/version-management/meld/default.nix @@ -17,7 +17,7 @@ in buildPythonApplication rec { buildInputs = [ intltool wrapGAppsHook itstool libxml2 - gnome3.gtksourceview gnome3.gsettings_desktop_schemas pycairo cairo + gnome3.gtksourceview gnome3.gsettings-desktop-schemas pycairo cairo gnome3.defaultIconTheme gnome3.dconf file ]; propagatedBuildInputs = [ gobjectIntrospection pygobject3 gtk3 ]; diff --git a/pkgs/applications/version-management/mercurial/default.nix b/pkgs/applications/version-management/mercurial/default.nix index 541bc8799a83..68750bb9e6e7 100644 --- a/pkgs/applications/version-management/mercurial/default.nix +++ b/pkgs/applications/version-management/mercurial/default.nix @@ -4,7 +4,7 @@ let # if you bump version, update pkgs.tortoisehg too or ping maintainer - version = "4.3.2"; + version = "4.5"; name = "mercurial-${version}"; inherit (python2Packages) docutils hg-git dulwich python; in python2Packages.buildPythonApplication { @@ -13,7 +13,7 @@ in python2Packages.buildPythonApplication { src = fetchurl { url = "https://mercurial-scm.org/release/${name}.tar.gz"; - sha256 = "0j6djq584rcj9ghz59ddqzrfq49lykg3wqwap5fnzp9apa4gcnqg"; + sha256 = "0rgjy42zdlbzgp4qq49amzplfcvycyijf4kdhc5wk3fqz7cki4sd"; }; inherit python; # pass it so that the same version can be used in hg2git diff --git a/pkgs/applications/version-management/peru/default.nix b/pkgs/applications/version-management/peru/default.nix index 01369b9685dc..3ac52a5c4403 100644 --- a/pkgs/applications/version-management/peru/default.nix +++ b/pkgs/applications/version-management/peru/default.nix @@ -2,13 +2,13 @@ python3Packages.buildPythonApplication rec { name = "peru-${version}"; - version = "1.1.0"; + version = "1.1.3"; src = fetchFromGitHub { owner = "buildinspace"; repo = "peru"; rev = "${version}"; - sha256 = "0hvp6pvpsz0f98az4f1wl93gqlz6wj24pjnc5zs1har9rqlpq8y8"; + sha256 = "02kr3ib3ppbmcsjy8i8z41vp9gw9gdivy2l5aps12lmaa3rc6727"; }; propagatedBuildInputs = with python3Packages; [ pyyaml docopt ]; diff --git a/pkgs/applications/version-management/sit/default.nix b/pkgs/applications/version-management/sit/default.nix new file mode 100644 index 000000000000..5c6e65915da5 --- /dev/null +++ b/pkgs/applications/version-management/sit/default.nix @@ -0,0 +1,23 @@ +{ stdenv, fetchFromGitHub, rustPlatform }: + +rustPlatform.buildRustPackage rec { + name = "sit-${version}"; + version = "0.1.3"; + + src = fetchFromGitHub { + owner = "sit-it"; + repo = "sit"; + rev = "v${version}"; + sha256 = "1ysy1lhb7fxy02a3c9xk2awa49svnfa8bqcz2aj4x56r2f8vhj0h"; + }; + + cargoSha256 = "1y8a8a9jn9f374sy5fs1snmpiqyckqc0aw7idwnpfr912c1zzrxw"; + + meta = with stdenv.lib; { + description = "SCM-agnostic, file-based, offline-first, immutable issue tracker"; + homepage = http://sit-it.org/; + license = with licenses; [ asl20 /* or */ mit ]; + maintainers = with maintainers; [ dywedir ]; + platforms = platforms.all; + }; +} diff --git a/pkgs/applications/version-management/tortoisehg/default.nix b/pkgs/applications/version-management/tortoisehg/default.nix index f06a0c90db14..437062f7f5e1 100644 --- a/pkgs/applications/version-management/tortoisehg/default.nix +++ b/pkgs/applications/version-management/tortoisehg/default.nix @@ -2,18 +2,18 @@ python2Packages.buildPythonApplication rec { name = "tortoisehg-${version}"; - version = "4.3.1"; + version = "4.5"; src = fetchurl { url = "https://bitbucket.org/tortoisehg/targz/downloads/${name}.tar.gz"; - sha256 = "0lxppjdqjmwl5y8fmp2am0my7a3mks811yg4fff7cx0569hdp62n"; + sha256 = "11m2hir2y1hblg9sqmansv16rcp560j2d3nhqzfhkim46a59fxvk"; }; pythonPath = with python2Packages; [ pyqt4 mercurial qscintilla iniparse ]; propagatedBuildInputs = with python2Packages; [ qscintilla iniparse ]; - doCheck = true; + doCheck = false; # tests fail with "thg: cannot connect to X server" dontStrip = true; buildPhase = ""; installPhase = '' diff --git a/pkgs/applications/video/aegisub/default.nix b/pkgs/applications/video/aegisub/default.nix index ebc1249dc11d..341ae5fd2737 100644 --- a/pkgs/applications/video/aegisub/default.nix +++ b/pkgs/applications/video/aegisub/default.nix @@ -64,6 +64,6 @@ stdenv.mkDerivation rec { # but they are linked against GPL'd softwares # - so the resulting program will be GPL maintainers = [ maintainers.AndersonTorres ]; - platforms = platforms.linux; + platforms = [ "i686-linux" "x86_64-linux" ]; }; } diff --git a/pkgs/applications/video/avidemux/bootstrap_logging.patch b/pkgs/applications/video/avidemux/bootstrap_logging.patch new file mode 100644 index 000000000000..8f45251d26c2 --- /dev/null +++ b/pkgs/applications/video/avidemux/bootstrap_logging.patch @@ -0,0 +1,26 @@ +diff --git a/bootStrap.bash b/bootStrap.bash +index 646a5e048..6429199ba 100644 +--- a/bootStrap.bash ++++ b/bootStrap.bash +@@ -4,6 +4,7 @@ + # + # By default we use qt5 now + # ++set -e # hard fail if something fails + packages_ext="" + rebuild=0 + do_core=1 +@@ -66,10 +67,10 @@ Process() + fi + cd $BUILDDIR + cmake $COMPILER $PKG $FAKEROOT $QT_FLAVOR -DCMAKE_EDIT_COMMAND=vim $INSTALL_PREFIX $EXTRA $BUILD_QUIRKS $ASAN $DEBUG -G "$BUILDER" $SOURCEDIR || fail cmakeZ +- make $PARAL >& /tmp/log$BUILDDIR || fail "make, result in /tmp/log$BUILDDIR" +- if [ "x$PKG" != "x" ] ; then ++ make $PARAL ++ if [ "x$PKG" != "x" ] ; then + $FAKEROOT_COMMAND make package DESTDIR=$FAKEROOT_DIR/tmp || fail package +- fi ++ fi + # we need the make install so that other packcges can be built against this one + make install DESTDIR=$FAKEROOT_DIR + } diff --git a/pkgs/applications/video/avidemux/default.nix b/pkgs/applications/video/avidemux/default.nix index 76b42acef3e1..62b819c600cc 100644 --- a/pkgs/applications/video/avidemux/default.nix +++ b/pkgs/applications/video/avidemux/default.nix @@ -1,6 +1,7 @@ { stdenv, lib, fetchurl, cmake, pkgconfig, lndir , zlib, gettext, libvdpau, libva, libXv, sqlite -, yasm, freetype, fontconfig, fribidi, gtk3, qt4 +, yasm, freetype, fontconfig, fribidi +, makeWrapper, libXext, mesa_glu, qttools, qtbase , alsaLib , withX265 ? true, x265 , withX264 ? true, x264 @@ -12,9 +13,18 @@ , withFAAD ? true, faad2 , withOpus ? true, libopus , withVPX ? true, libvpx +, withQT ? true +, withCLI ? true +, default ? "qt5" +, withPlugins ? true }: -let +assert withQT -> qttools != null && qtbase != null; +assert default != "qt5" -> default == "cli"; +assert !withQT -> default != "qt5"; + +stdenv.mkDerivation rec { + name = "avidemux-${version}"; version = "2.7.0"; src = fetchurl { @@ -22,112 +32,54 @@ let sha256 = "1bf4l9qwxq3smc1mx5pybydc742a4qqsk17z50j9550d9iwnn7gy"; }; - common = { - inherit version src; + patches = [ ./dynamic_install_dir.patch ./bootstrap_logging.patch ]; - patches = [ ./dynamic_install_dir.patch ]; + nativeBuildInputs = [ yasm cmake pkgconfig ]; + buildInputs = [ + zlib gettext libvdpau libva libXv sqlite fribidi fontconfig + freetype alsaLib libXext mesa_glu makeWrapper + ] ++ lib.optional withX264 x264 + ++ lib.optional withX265 x265 + ++ lib.optional withXvid xvidcore + ++ lib.optional withLAME lame + ++ lib.optional withFAAC faac + ++ lib.optional withVorbis libvorbis + ++ lib.optional withPulse libpulseaudio + ++ lib.optional withFAAD faad2 + ++ lib.optional withOpus libopus + ++ lib.optionals withQT [ qttools qtbase ] + ++ lib.optional withVPX libvpx; - enableParallelBuilding = false; + buildCommand = '' + unpackPhase + cd "$sourceRoot" + patchPhase - nativeBuildInputs = [ cmake pkgconfig yasm ]; - buildInputs = [ zlib gettext libvdpau libva libXv sqlite fribidi fontconfig freetype alsaLib ] - ++ lib.optional withX264 x264 - ++ lib.optional withX265 x265 - ++ lib.optional withXvid xvidcore - ++ lib.optional withLAME lame - ++ lib.optional withFAAC faac - ++ lib.optional withVorbis libvorbis - ++ lib.optional withPulse libpulseaudio - ++ lib.optional withFAAD faad2 - ++ lib.optional withOpus libopus - ++ lib.optional withVPX libvpx - ; + export LD_LIBRARY_PATH="$LD_LIBRARY_PATH:${libXext}/lib" + ${stdenv.shell} bootStrap.bash \ + --with-core \ + ${if withQT then "--with-qt" else "--without-qt"} \ + ${if withCLI then "--with-cli" else "--without-cli"} \ + ${if withPlugins then "--with-plugins" else "--without-plugins"} - meta = { - homepage = http://fixounet.free.fr/avidemux/; - description = "Free video editor designed for simple video editing tasks"; - maintainers = with stdenv.lib.maintainers; [ viric abbradar ]; - platforms = with stdenv.lib.platforms; linux; - license = stdenv.lib.licenses.gpl2; - }; - }; + mkdir $out + cp -R install/usr/* $out - core = stdenv.mkDerivation (common // { - name = "avidemux-${version}"; + for i in $out/bin/*; do + wrapProgram $i \ + --set ADM_ROOT_DIR $out \ + --prefix LD_LIBRARY_PATH ":" "${libXext}/lib" + done + ln -s "$out/bin/avidemux3_${default}" "$out/bin/avidemux" - preConfigure = '' - cd avidemux_core - ''; - }); + fixupPhase + ''; - buildPlugin = args: stdenv.mkDerivation (common // { - name = "avidemux-${args.pluginName}-${version}"; - - buildInputs = (args.buildInputs or []) ++ common.buildInputs ++ [ lndir ]; - - cmakeFlags = [ "-DPLUGIN_UI=${args.pluginUi}" ]; - - passthru.isUi = args.isUi or false; - - buildCommand = '' - unpackPhase - cd "$sourceRoot" - patchPhase - - mkdir $out - lndir ${core} $out - - export cmakeFlags="$cmakeFlags -DAVIDEMUX_SOURCE_DIR=$(pwd)" - - for i in ${toString (args.buildDirs or [])} avidemux_plugins; do - ( cd "$i" - cmakeConfigurePhase - buildPhase - installPhase - ) - done - - fixupPhase - ''; - - meta = common.meta // args.meta or {}; - }); - -in { - avidemux_core = core; - - avidemux_cli = buildPlugin { - pluginName = "cli"; - pluginUi = "CLI"; - isUi = true; - buildDirs = [ "avidemux/cli" ]; - }; - - avidemux_qt4 = buildPlugin { - pluginName = "qt4"; - buildInputs = [ qt4 ]; - pluginUi = "QT4"; - isUi = true; - buildDirs = [ "avidemux/qt4" ]; - }; - - avidemux_gtk = buildPlugin { - pluginName = "gtk"; - buildInputs = [ gtk3 ]; - pluginUi = "GTK"; - isUi = true; - buildDirs = [ "avidemux/gtk" ]; - # Code seems unmaintained. - meta.broken = true; - }; - - avidemux_common = buildPlugin { - pluginName = "common"; - pluginUi = "COMMON"; - }; - - avidemux_settings = buildPlugin { - pluginName = "settings"; - pluginUi = "SETTINGS"; + meta = with stdenv.lib; { + homepage = http://fixounet.free.fr/avidemux/; + description = "Free video editor designed for simple video editing tasks"; + maintainers = with maintainers; [ viric abbradar ma27 ]; + platforms = platforms.linux; + license = licenses.gpl2; }; } diff --git a/pkgs/applications/video/avidemux/wrapper.nix b/pkgs/applications/video/avidemux/wrapper.nix deleted file mode 100644 index 7f05b81baec7..000000000000 --- a/pkgs/applications/video/avidemux/wrapper.nix +++ /dev/null @@ -1,24 +0,0 @@ -{ symlinkJoin, avidemux_unwrapped, makeWrapper -# GTK version is broken upstream, see https://bugzilla.redhat.com/show_bug.cgi?id=1244340 -, withUi ? "qt4" -}: - -let ui = builtins.getAttr "avidemux_${withUi}" avidemux_unwrapped; in - -assert ui.isUi; - -symlinkJoin { - name = "avidemux-${withUi}-${ui.version}"; - - paths = [ ui avidemux_unwrapped.avidemux_common avidemux_unwrapped.avidemux_settings ]; - - buildInputs = [ makeWrapper ]; - - postBuild = '' - for i in $out/bin/*; do - wrapProgram $i --set ADM_ROOT_DIR $out - done - ''; - - meta = ui.meta; -} diff --git a/pkgs/applications/video/byzanz/default.nix b/pkgs/applications/video/byzanz/default.nix index b00aae61d36d..ea8cb5aa3ffa 100644 --- a/pkgs/applications/video/byzanz/default.nix +++ b/pkgs/applications/video/byzanz/default.nix @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { NIX_CFLAGS_COMPILE = "-Wno-error=deprecated-declarations"; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ which gnome3.gnome_common glib intltool libtool cairo gtk3 xorg.xwininfo ] + buildInputs = [ which gnome3.gnome-common glib intltool libtool cairo gtk3 xorg.xwininfo ] ++ (with gst_all_1; [ gstreamer gst-plugins-base gst-plugins-bad gst-plugins-good gst-plugins-ugly gst-libav wrapGAppsHook ]); meta = with stdenv.lib; { diff --git a/pkgs/applications/video/dvdstyler/default.nix b/pkgs/applications/video/dvdstyler/default.nix index e59469c704cb..f89aa04e0146 100644 --- a/pkgs/applications/video/dvdstyler/default.nix +++ b/pkgs/applications/video/dvdstyler/default.nix @@ -15,11 +15,11 @@ stdenv.mkDerivation rec { name = "dvdstyler-${version}"; srcName = "DVDStyler-${version}"; - version = "3.0.3"; + version = "3.0.4"; src = fetchurl { url = "mirror://sourceforge/project/dvdstyler/dvdstyler/${version}/${srcName}.tar.bz2"; - sha256 = "1j432kszmwmsd3nz398h5514dbm5vsrn4rr3iil72ckjj1h3i00q"; + sha256 = "0lwc0hn94m9r8fi07sjqz3fr618l6lnw3zsakxw7nlgnxbjsk7pi"; }; nativeBuildInputs = diff --git a/pkgs/applications/video/gnome-mplayer/default.nix b/pkgs/applications/video/gnome-mplayer/default.nix index 9f98d46d53bd..fd8cc8d86306 100644 --- a/pkgs/applications/video/gnome-mplayer/default.nix +++ b/pkgs/applications/video/gnome-mplayer/default.nix @@ -1,4 +1,4 @@ -{stdenv, substituteAll, fetchFromGitHub, pkgconfig, gettext, glib, gtk3, gmtk, dbus, dbus_glib +{stdenv, substituteAll, fetchFromGitHub, pkgconfig, gettext, glib, gtk3, gmtk, dbus, dbus-glib , libnotify, libpulseaudio, mplayer, wrapGAppsHook }: stdenv.mkDerivation rec { @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig gettext wrapGAppsHook ]; - buildInputs = [ glib gtk3 gmtk dbus dbus_glib libnotify libpulseaudio ]; + buildInputs = [ glib gtk3 gmtk dbus dbus-glib libnotify libpulseaudio ]; patches = [ (substituteAll { diff --git a/pkgs/applications/video/gnome-mpv/default.nix b/pkgs/applications/video/gnome-mpv/default.nix index 0b4bd5851341..1bb77ffc4a80 100644 --- a/pkgs/applications/video/gnome-mpv/default.nix +++ b/pkgs/applications/video/gnome-mpv/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub, meson, ninja -, gettext, pkgconfig, desktop_file_utils, wrapGAppsHook +, gettext, pkgconfig, desktop-file-utils, wrapGAppsHook , appstream-glib, epoxy, glib, gtk3, mpv }: @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { sha256 = "1cjhw3kz163iwj2japhnv354i1lr112xyyfkxw82cwy2554cfim4"; }; - nativeBuildInputs = [ meson ninja appstream-glib gettext pkgconfig desktop_file_utils wrapGAppsHook ]; + nativeBuildInputs = [ meson ninja appstream-glib gettext pkgconfig desktop-file-utils wrapGAppsHook ]; buildInputs = [ epoxy glib gtk3 mpv ]; enableParallelBuilding = true; diff --git a/pkgs/applications/video/handbrake/default.nix b/pkgs/applications/video/handbrake/default.nix index 7d0cfb455306..3e796275907c 100644 --- a/pkgs/applications/video/handbrake/default.nix +++ b/pkgs/applications/video/handbrake/default.nix @@ -16,9 +16,9 @@ libogg, libopus, libtheora, libvorbis, libdvdcss, a52dec, fdk_aac, lame, ffmpeg, libdvdread, libdvdnav, libbluray, mp4v2, mpeg2dec, x264, x265, libmkv, - fontconfig, freetype, hicolor_icon_theme, + fontconfig, freetype, hicolor-icon-theme, glib, gtk3, intltool, libnotify, - gst_all_1, dbus_glib, udev, libgudev, libvpx, + gst_all_1, dbus-glib, udev, libgudev, libvpx, useGtk ? true, wrapGAppsHook ? null, libappindicator-gtk3 ? null }: @@ -46,7 +46,7 @@ stdenv.mkDerivation rec { lame ffmpeg libdvdread libdvdnav libbluray mp4v2 mpeg2dec x264 x265 libvpx ] ++ (lib.optionals useGtk [ glib gtk3 libappindicator-gtk3 libnotify - gst_all_1.gstreamer gst_all_1.gst-plugins-base dbus_glib udev + gst_all_1.gstreamer gst_all_1.gst-plugins-base dbus-glib udev libgudev ]); diff --git a/pkgs/applications/video/kazam/default.nix b/pkgs/applications/video/kazam/default.nix index 8653305f908a..862032572dcf 100644 --- a/pkgs/applications/video/kazam/default.nix +++ b/pkgs/applications/video/kazam/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, python3Packages, gst_all_1, makeWrapper, gobjectIntrospection -, gtk3, libwnck3, keybinder, intltool, libcanberra_gtk2 }: +, gtk3, libwnck3, keybinder, intltool, libcanberra-gtk2 }: python3Packages.buildPythonApplication rec { @@ -25,7 +25,7 @@ python3Packages.buildPythonApplication rec { patches = [ ./datadir.patch ./bug_1190693.patch ]; prePatch = '' rm setup.cfg - substituteInPlace kazam/backend/grabber.py --replace "/usr/bin/canberra-gtk-play" "${libcanberra_gtk2}/bin/canberra-gtk-play" + substituteInPlace kazam/backend/grabber.py --replace "/usr/bin/canberra-gtk-play" "${libcanberra-gtk2}/bin/canberra-gtk-play" ''; # no tests diff --git a/pkgs/applications/video/kodi/default.nix b/pkgs/applications/video/kodi/default.nix index 28577a429bd2..4eb4bb095eaf 100644 --- a/pkgs/applications/video/kodi/default.nix +++ b/pkgs/applications/video/kodi/default.nix @@ -18,7 +18,7 @@ , libcec, libcec_platform, dcadec, libuuid , libcrossguid, libmicrohttpd , bluez, doxygen, giflib, glib, harfbuzz, lcms2, libidn, libpthreadstubs, libtasn1, libXdmcp -, libplist, p11_kit, zlib +, libplist, p11-kit, zlib , dbusSupport ? true, dbus_libs ? null , joystickSupport ? true, cwiid ? null , nfsSupport ? true, libnfs ? null @@ -78,7 +78,7 @@ let preConfigure = '' cp ${kodi_src}/tools/depends/target/ffmpeg/{CMakeLists.txt,*.cmake} . ''; - buildInputs = [ gnutls libidn libtasn1 p11_kit zlib libva ] + buildInputs = [ gnutls libidn libtasn1 p11-kit zlib libva ] ++ lib.optional vdpauSupport libvdpau; nativeBuildInputs = [ cmake nasm pkgconfig ]; }; @@ -118,7 +118,7 @@ in stdenv.mkDerivation rec { src = kodi_src; buildInputs = [ - gnutls libidn libtasn1 nasm p11_kit + gnutls libidn libtasn1 nasm p11-kit libxml2 yasm python2 boost libmicrohttpd gettext pcre-cpp yajl fribidi libva diff --git a/pkgs/applications/video/miro/default.nix b/pkgs/applications/video/miro/default.nix index 3a297abb15c4..b3cfe21b7d69 100644 --- a/pkgs/applications/video/miro/default.nix +++ b/pkgs/applications/video/miro/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, pkgconfig , pythonPackages, pyrex096, ffmpeg, boost, glib, gtk2, webkitgtk24x-gtk2, libsoup , taglib, sqlite -, libtorrentRasterbar, glib_networking, gsettings_desktop_schemas +, libtorrentRasterbar, glib-networking, gsettings-desktop-schemas , gst-python, gst-plugins-base, gst-plugins-good, gst-ffmpeg , enableBonjour ? false, avahi ? null }: @@ -65,13 +65,13 @@ in buildPythonApplication rec { mv "$out/bin/miro.real" "$out/bin/miro" wrapProgram "$out/bin/miro" \ --prefix GST_PLUGIN_SYSTEM_PATH : "$GST_PLUGIN_SYSTEM_PATH" \ - --prefix GIO_EXTRA_MODULES : "${glib_networking.out}/lib/gio/modules" \ + --prefix GIO_EXTRA_MODULES : "${glib-networking.out}/lib/gio/modules" \ --prefix XDG_DATA_DIRS : "$GSETTINGS_SCHEMAS_PATH:$out/share" ''; buildInputs = with pythonPackages; [ pygtk pygobject2 ] ++ [ pkgconfig pyrex096 ffmpeg boost glib gtk2 webkitgtk24x-gtk2 libsoup - taglib gsettings_desktop_schemas sqlite + taglib gsettings-desktop-schemas sqlite ]; propagatedBuildInputs = with pythonPackages; [ diff --git a/pkgs/applications/video/mkcast/default.nix b/pkgs/applications/video/mkcast/default.nix index 2c5d3d365c12..2d5d2d3b102c 100644 --- a/pkgs/applications/video/mkcast/default.nix +++ b/pkgs/applications/video/mkcast/default.nix @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { postInstall = '' for f in $out/bin/*; do #*/ - wrapProgram $f --prefix PATH : "${stdenv.lib.makeBinPath [ xdpyinfo wmctrl byzanz gnome3.gnome_terminal ]}:$out/bin" + wrapProgram $f --prefix PATH : "${stdenv.lib.makeBinPath [ xdpyinfo wmctrl byzanz gnome3.gnome-terminal ]}:$out/bin" done rm -r screenkey/.bzr diff --git a/pkgs/applications/video/mpv/default.nix b/pkgs/applications/video/mpv/default.nix index 403fc7e4ee11..1616665b75d5 100644 --- a/pkgs/applications/video/mpv/default.nix +++ b/pkgs/applications/video/mpv/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, fetchFromGitHub, fetchpatch, makeWrapper , docutils, perl, pkgconfig, python3, which, ffmpeg , freefont_ttf, freetype, libass, libpthreadstubs -, lua, lua5_sockets, libuchardet, libiconv ? null, darwin +, lua, luasocket, libuchardet, libiconv ? null, darwin , x11Support ? true, mesa ? null, @@ -13,25 +13,25 @@ wayland ? null, libxkbcommon ? null -, rubberbandSupport ? !stdenv.isDarwin, rubberband ? null +, rubberbandSupport ? true, rubberband ? null , xineramaSupport ? true, libXinerama ? null , xvSupport ? true, libXv ? null , sdl2Support ? true, SDL2 ? null -, alsaSupport ? !stdenv.isDarwin, alsaLib ? null +, alsaSupport ? true, alsaLib ? null , screenSaverSupport ? true, libXScrnSaver ? null , vdpauSupport ? true, libvdpau ? null -, dvdreadSupport ? !stdenv.isDarwin, libdvdread ? null -, dvdnavSupport ? dvdreadSupport, libdvdnav ? null +, dvdreadSupport ? true, libdvdread ? null +, dvdnavSupport ? true, libdvdnav ? null , bluraySupport ? true, libbluray ? null , speexSupport ? true, speex ? null , theoraSupport ? true, libtheora ? null -, pulseSupport ? !stdenv.isDarwin, libpulseaudio ? null +, pulseSupport ? true, libpulseaudio ? null , bs2bSupport ? true, libbs2b ? null , cacaSupport ? true, libcaca ? null , libpngSupport ? true, libpng ? null , youtubeSupport ? true, youtube-dl ? null , vaapiSupport ? true, libva ? null -, drmSupport ? !stdenv.isDarwin, libdrm ? null +, drmSupport ? true, libdrm ? null , vapoursynthSupport ? false, vapoursynth ? null , archiveSupport ? false, libarchive ? null , jackaudioSupport ? false, libjack2 ? null @@ -127,14 +127,15 @@ in stdenv.mkDerivation rec { python3 ${waf} configure --prefix=$out $configureFlags ''; - nativeBuildInputs = [ docutils makeWrapper perl pkgconfig python3 which ]; + nativeBuildInputs = [ + docutils makeWrapper perl + pkgconfig python3 which + ]; buildInputs = [ ffmpeg freetype libass libpthreadstubs - lua lua5_sockets libuchardet - ] ++ optionals stdenv.isDarwin (with darwin.apple_sdk.frameworks; [ - libiconv Cocoa CoreAudio ]) - ++ optional alsaSupport alsaLib + lua luasocket libuchardet + ] ++ optional alsaSupport alsaLib ++ optional xvSupport libXv ++ optional theoraSupport libtheora ++ optional xineramaSupport libXinerama @@ -157,7 +158,10 @@ in stdenv.mkDerivation rec { ++ optional archiveSupport libarchive ++ optionals dvdnavSupport [ libdvdnav libdvdnav.libdvdread ] ++ optionals x11Support [ libX11 libXext mesa libXxf86vm ] - ++ optionals waylandSupport [ wayland libxkbcommon ]; + ++ optionals waylandSupport [ wayland libxkbcommon ] + ++ optionals stdenv.isDarwin (with darwin.apple_sdk.frameworks; [ + libiconv Cocoa CoreAudio + ]); enableParallelBuilding = true; @@ -165,7 +169,14 @@ in stdenv.mkDerivation rec { python3 ${waf} build ''; - installPhase = '' + installPhase = + let + getPath = type : "${luasocket}/lib/lua/${lua.luaversion}/?.${type};" + + "${luasocket}/share/lua/${lua.luaversion}/?.${type}"; + luaPath = getPath "lua"; + luaCPath = getPath "so"; + in + '' python3 ${waf} install # Use a standard font @@ -174,6 +185,8 @@ in stdenv.mkDerivation rec { # Ensure youtube-dl is available in $PATH for MPV wrapProgram $out/bin/mpv \ --add-flags "--scripts=${concatStringsSep "," scripts}" \ + --prefix LUA_PATH : "${luaPath}" \ + --prefix LUA_CPATH : "${luaCPath}" \ '' + optionalString youtubeSupport '' --prefix PATH : "${youtube-dl}/bin" \ '' + optionalString vapoursynthSupport '' @@ -199,5 +212,3 @@ in stdenv.mkDerivation rec { ''; }; } -# TODO: investigate caca support -# TODO: investigate lua5_sockets bug diff --git a/pkgs/applications/video/openshot-qt/default.nix b/pkgs/applications/video/openshot-qt/default.nix index 86b8dab7f1f2..aa9643416485 100644 --- a/pkgs/applications/video/openshot-qt/default.nix +++ b/pkgs/applications/video/openshot-qt/default.nix @@ -4,13 +4,13 @@ python3Packages.buildPythonApplication rec { name = "openshot-qt-${version}"; - version = "2.3.4"; + version = "2.4.1"; src = fetchFromGitHub { owner = "OpenShot"; repo = "openshot-qt"; rev = "v${version}"; - sha256 = "026zxvg5mij49g021hipv3hspsx8m5bs4v9pm2axqw6rvszjk90z"; + sha256 = "182dldj9ybs6aqjfrc9dqx1mifdyhv0rf3ifxcp52cm9rz5yv8ml"; }; nativeBuildInputs = [ doxygen wrapGAppsHook ]; diff --git a/pkgs/applications/video/peek/default.nix b/pkgs/applications/video/peek/default.nix index d55f0aa1b35b..9858edf82389 100644 --- a/pkgs/applications/video/peek/default.nix +++ b/pkgs/applications/video/peek/default.nix @@ -1,21 +1,21 @@ { stdenv, fetchFromGitHub, cmake, gettext, libxml2, pkgconfig, txt2man, vala, wrapGAppsHook -, gsettings_desktop_schemas, gtk3, keybinder3 +, gsettings-desktop-schemas, gtk3, keybinder3 }: stdenv.mkDerivation rec { name = "peek-${version}"; - version = "1.2.0"; + version = "1.2.2"; src = fetchFromGitHub { owner = "phw"; repo = "peek"; rev = version; - sha256 = "04sc6gfrqvnx288rmgsywpjx9l6jcfn2qdbwjcbdvx4wl3gna0qm"; + sha256 = "1ihmq914g2h5iw86bigkkblzqimr50yq6z883lzq656xkcayd8gh"; }; nativeBuildInputs = [ cmake gettext pkgconfig libxml2.bin txt2man vala wrapGAppsHook ]; - buildInputs = [ gsettings_desktop_schemas gtk3 keybinder3 ]; + buildInputs = [ gsettings-desktop-schemas gtk3 keybinder3 ]; enableParallelBuilding = true; diff --git a/pkgs/applications/video/pitivi/default.nix b/pkgs/applications/video/pitivi/default.nix index c4d80344080d..48074a86b552 100644 --- a/pkgs/applications/video/pitivi/default.nix +++ b/pkgs/applications/video/pitivi/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, intltool, itstool, wrapGAppsHook -, python3Packages, gst, gtk3, hicolor_icon_theme +, python3Packages, gst, gtk3, hicolor-icon-theme , gobjectIntrospection, librsvg, gnome3, libnotify # for gst-transcoder: , which, meson, ninja @@ -34,9 +34,9 @@ in stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig intltool itstool wrapGAppsHook ]; buildInputs = [ - gobjectIntrospection gtk3 librsvg gnome3.gnome_desktop + gobjectIntrospection gtk3 librsvg gnome3.gnome-desktop gnome3.defaultIconTheme - gnome3.gsettings_desktop_schemas libnotify + gnome3.gsettings-desktop-schemas libnotify gst-transcoder ] ++ (with gst; [ gstreamer gst-editing-services diff --git a/pkgs/applications/video/screenkey/default.nix b/pkgs/applications/video/screenkey/default.nix new file mode 100644 index 000000000000..5638fad39e5d --- /dev/null +++ b/pkgs/applications/video/screenkey/default.nix @@ -0,0 +1,60 @@ +{ lib +, substituteAll +, buildPythonApplication +, fetchFromGitHub +, distutils_extra +, setuptools-git +, intltool +, pygtk +, libX11 +, libXtst +, wrapGAppsHook +, defaultIconTheme +, hicolor_icon_theme +}: +buildPythonApplication rec { + pname = "screenkey"; + version = "0.9"; + + src = fetchFromGitHub { + owner = "wavexx"; + repo = "screenkey"; + rev = "screenkey-${version}"; + sha256 = "14g7fiv9n7m03djwz1pp5034pffi87ssvss9bc1q8vq0ksn23vrw"; + }; + + patches = [ + (substituteAll { + src = ./paths.patch; + inherit libX11 libXtst; + }) + ]; + + nativeBuildInputs = [ + distutils_extra + setuptools-git + intltool + + wrapGAppsHook + ]; + + buildInputs = [ + defaultIconTheme + hicolor_icon_theme + ]; + + propagatedBuildInputs = [ + pygtk + ]; + + # screenkey does not have any tests + doCheck = false; + + meta = with lib; { + homepage = https://www.thregr.org/~wavexx/software/screenkey/; + description = "A screencast tool to display your keys inspired by Screenflick"; + license = licenses.gpl3Plus; + platforms = platforms.linux; + maintainers = [ maintainers.rasendubi ]; + }; +} diff --git a/pkgs/applications/video/screenkey/paths.patch b/pkgs/applications/video/screenkey/paths.patch new file mode 100644 index 000000000000..7e5ed47fc19d --- /dev/null +++ b/pkgs/applications/video/screenkey/paths.patch @@ -0,0 +1,20 @@ +--- a/Screenkey/xlib.py ++++ b/Screenkey/xlib.py +@@ -6,7 +6,7 @@ + from ctypes import * + + ## base X11 +-libX11 = CDLL('libX11.so.6') ++libX11 = CDLL('@libX11@/lib/libX11.so.6') + + # types + Atom = c_ulong +@@ -278,7 +278,7 @@ + + + ## record extensions +-libXtst = CDLL('libXtst.so.6') ++libXtst = CDLL('@libXtst@/lib/libXtst.so.6') + + # types + XPointer = String \ No newline at end of file diff --git a/pkgs/applications/video/smplayer/default.nix b/pkgs/applications/video/smplayer/default.nix index e7deccee0d9f..9e547a791a48 100644 --- a/pkgs/applications/video/smplayer/default.nix +++ b/pkgs/applications/video/smplayer/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, qmake, qtscript }: stdenv.mkDerivation rec { - name = "smplayer-17.9.0"; + name = "smplayer-18.2.2"; src = fetchurl { url = "mirror://sourceforge/smplayer/${name}.tar.bz2"; - sha256 = "0s9856cmwl829d2xc2ycf97phpv4a2d39ybmnbhsrb07jq5hkw1a"; + sha256 = "0q0m9q643z6ih5gkf1fq3d6y99d62yxkhfgap98h251q6kd7dhis"; }; buildInputs = [ qtscript ]; diff --git a/pkgs/applications/video/subtitleeditor/default.nix b/pkgs/applications/video/subtitleeditor/default.nix index 536b4ba0fac4..3683973824a3 100644 --- a/pkgs/applications/video/subtitleeditor/default.nix +++ b/pkgs/applications/video/subtitleeditor/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub, autoreconfHook, pkgconfig, intltool, file, - desktop_file_utils, enchant, gnome3, gst_all_1, hicolor_icon_theme, + desktop-file-utils, enchant, gnome3, gst_all_1, hicolor-icon-theme, libsigcxx, libxmlxx, xdg_utils, isocodes, wrapGAppsHook }: @@ -26,7 +26,7 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - desktop_file_utils + desktop-file-utils enchant gnome3.gtk gnome3.gtkmm @@ -34,7 +34,7 @@ stdenv.mkDerivation rec { gst_all_1.gstreamermm gst_all_1.gst-plugins-base gst_all_1.gst-plugins-good - hicolor_icon_theme + hicolor-icon-theme libsigcxx libxmlxx xdg_utils diff --git a/pkgs/applications/video/webtorrent_desktop/default.nix b/pkgs/applications/video/webtorrent_desktop/default.nix new file mode 100644 index 000000000000..bb519ef3dab0 --- /dev/null +++ b/pkgs/applications/video/webtorrent_desktop/default.nix @@ -0,0 +1,88 @@ +{ + alsaLib, atk, cairo, cups, dbus, dpkg, expat, fetchurl, fontconfig, freetype, + gdk_pixbuf, glib, gnome2, libX11, libXScrnSaver, libXcomposite, libXcursor, + libXdamage, libXext, libXfixes, libXi, libXrandr, libXrender, libXtst, + libxcb, nspr, nss, stdenv, udev +}: + + let + rpath = stdenv.lib.makeLibraryPath ([ + alsaLib + atk + cairo + cups + dbus + expat + fontconfig + freetype + gdk_pixbuf + glib + gnome2.GConf + gnome2.gtk + gnome2.pango + libX11 + libXScrnSaver + libXcomposite + libXcursor + libXdamage + libXext + libXfixes + libXi + libXrandr + libXrender + libXtst + libxcb + nspr + nss + stdenv.cc.cc + udev + ]); + in stdenv.mkDerivation rec { + name = "webtorrent-desktop-${version}"; + version = "0.19.0"; + + src = + if stdenv.system == "x86_64-linux" then + fetchurl { + url = "https://github.com/webtorrent/webtorrent-desktop/releases/download/v0.19.0/webtorrent-desktop_${version}-1_amd64.deb"; + sha256 = "0v4fgvf8qgxjwg5kz30pcxl71pi9rri0l3cy20pid07rdd6r4sgd"; + } + else + throw "Webtorrent is not currently supported on ${stdenv.system}"; + phases = [ "unpackPhase" "installPhase" ]; + nativeBuildInputs = [ dpkg ]; + unpackPhase = "dpkg-deb -x $src ."; + installPhase = '' + mkdir -p $out + cp -R opt $out + + mv ./usr/share $out/share + mv $out/opt/webtorrent-desktop $out/libexec + chmod +x $out/libexec/WebTorrent + rmdir $out/opt + + chmod -R g-w $out + + # Patch WebTorrent + patchelf --set-interpreter "$(cat $NIX_CC/nix-support/dynamic-linker)" \ + --set-rpath ${rpath}:$out/libexec $out/libexec/WebTorrent + + # Symlink to bin + mkdir -p $out/bin + ln -s $out/libexec/WebTorrent $out/bin/WebTorrent + + # Fix the desktop link + substituteInPlace $out/share/applications/webtorrent-desktop.desktop \ + --replace /opt/webtorrent-desktop/WebTorrent $out/bin/WebTorrent + ''; + + meta = with stdenv.lib; { + description = "Streaming torrent app for Mac, Windows, and Linux."; + homepage = https://webtorrent.io/desktop; + license = licenses.mit; + maintainers = [ maintainers.flokli ]; + platforms = [ + "x86_64-linux" + ]; + }; + } diff --git a/pkgs/applications/video/xine-ui/default.nix b/pkgs/applications/video/xine-ui/default.nix index b417489c14c0..5e44116415ea 100644 --- a/pkgs/applications/video/xine-ui/default.nix +++ b/pkgs/applications/video/xine-ui/default.nix @@ -1,5 +1,5 @@ {stdenv, fetchurl, pkgconfig, xorg, libpng, xineLib, readline, ncurses, curl -, lirc, shared_mime_info, libjpeg }: +, lirc, shared-mime-info, libjpeg }: stdenv.mkDerivation rec { name = "xine-ui-0.99.9"; @@ -9,7 +9,7 @@ stdenv.mkDerivation rec { sha256 = "18liwmkbj75xs9bipw3vr67a7cwmdfcp04v5lph7nsjlkwhq1lcd"; }; - nativeBuildInputs = [ pkgconfig shared_mime_info ]; + nativeBuildInputs = [ pkgconfig shared-mime-info ]; buildInputs = [ xineLib libpng readline ncurses curl lirc libjpeg diff --git a/pkgs/applications/virtualization/containerd/default.nix b/pkgs/applications/virtualization/containerd/default.nix index 86b6535e5396..8f456a2a49a8 100644 --- a/pkgs/applications/virtualization/containerd/default.nix +++ b/pkgs/applications/virtualization/containerd/default.nix @@ -5,13 +5,13 @@ with lib; stdenv.mkDerivation rec { name = "containerd-${version}"; - version = "1.0.1"; + version = "1.0.2"; src = fetchFromGitHub { owner = "containerd"; repo = "containerd"; rev = "v${version}"; - sha256 = "0kfafqi66yp4qy738pl11f050hfrx9m4kc670qpx7fmf9ii7q6p2"; + sha256 = "1x6mmk69jksh4m9rjd8qwpp0qc7jmimpkq9pw9237p0v63p9yci0"; }; hardeningDisable = [ "fortify" ]; diff --git a/pkgs/applications/virtualization/docker/default.nix b/pkgs/applications/virtualization/docker/default.nix index 339d3e8490d9..af15240dc12e 100644 --- a/pkgs/applications/virtualization/docker/default.nix +++ b/pkgs/applications/virtualization/docker/default.nix @@ -198,13 +198,13 @@ rec { # https://github.com/docker/docker-ce/blob/v${version}/components/engine/hack/dockerfile/binaries-commits docker_17_12 = dockerGen rec { - version = "17.12.0-ce"; - rev = "486a48d2701493bb65385788a291e36febb44ec1"; # git commit - sha256 = "14kp7wrzf3s9crk8px1dc575lchyrcl2dqiwr3sgxb9mzjfiyqps"; - runcRev = "b2567b37d7b75eb4cf325b77297b140ea686ce8f"; - runcSha256 = "0zarsrbfcm1yp6mdl6rcrigdf7nb70xmv2cbggndz0qqyrw0mk0l"; - containerdRev = "89623f28b87a6004d4b785663257362d1658a729"; - containerdSha256 = "0irx7ps6rhq7z69cr3gspxdr7ywrv6dz62gkr1z2723cki9hsxma"; + version = "17.12.1-ce"; + rev = "7390fc6103da41cf98ae66cfac80fa143268bf60"; # git commit + sha256 = "14pz5yqsjypjb6xiq828jrg9aq7wajrrf3mnd9109lw224p03d8i"; + runcRev = "9f9c96235cc97674e935002fc3d78361b696a69e"; + runcSha256 = "18f8vqdbf685dd777pjh8jzpxafw2vapqh4m43xgyi7lfwa0gsln"; + containerdRev = "9b55aab90508bd389d7654c4baf173a981477d55"; + containerdSha256 = "0kfafqi66yp4qy738pl11f050hfrx9m4kc670qpx7fmf9ii7q6p2"; tiniRev = "949e6facb77383876aeff8a6944dde66b3089574"; tiniSha256 = "0zj4kdis1vvc6dwn4gplqna0bs7v6d1y2zc8v80s3zi018inhznw"; }; diff --git a/pkgs/applications/virtualization/looking-glass-client/default.nix b/pkgs/applications/virtualization/looking-glass-client/default.nix index e9cee2503851..bd014dd60d37 100644 --- a/pkgs/applications/virtualization/looking-glass-client/default.nix +++ b/pkgs/applications/virtualization/looking-glass-client/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub -, pkgconfig, SDL2, SDL, SDL2_ttf, openssl, spice_protocol, fontconfig +, pkgconfig, SDL2, SDL, SDL2_ttf, openssl, spice-protocol, fontconfig , libX11, freefont_ttf }: @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig ]; buildInputs = [ - SDL SDL2 SDL2_ttf openssl spice_protocol fontconfig + SDL SDL2 SDL2_ttf openssl spice-protocol fontconfig libX11 freefont_ttf ]; diff --git a/pkgs/applications/virtualization/qemu/default.nix b/pkgs/applications/virtualization/qemu/default.nix index 694026d3bac2..00303be12da2 100644 --- a/pkgs/applications/virtualization/qemu/default.nix +++ b/pkgs/applications/virtualization/qemu/default.nix @@ -9,7 +9,7 @@ , pulseSupport ? !stdenv.isDarwin, libpulseaudio , sdlSupport ? !stdenv.isDarwin, SDL , vncSupport ? true, libjpeg, libpng -, spiceSupport ? !stdenv.isDarwin, spice, spice_protocol +, spiceSupport ? !stdenv.isDarwin, spice, spice-protocol , usbredirSupport ? spiceSupport, usbredir , xenSupport ? false, xen , hostCpuOnly ? false @@ -54,7 +54,7 @@ stdenv.mkDerivation rec { ++ optionals pulseSupport [ libpulseaudio ] ++ optionals sdlSupport [ SDL ] ++ optionals vncSupport [ libjpeg libpng ] - ++ optionals spiceSupport [ spice_protocol spice ] + ++ optionals spiceSupport [ spice-protocol spice ] ++ optionals usbredirSupport [ usbredir ] ++ optionals stdenv.isLinux [ alsaLib libaio libcap_ng libcap attr ] ++ optionals xenSupport [ xen ]; diff --git a/pkgs/applications/virtualization/spice-vdagent/default.nix b/pkgs/applications/virtualization/spice-vdagent/default.nix index 74da6c4ab167..15ae244b3291 100644 --- a/pkgs/applications/virtualization/spice-vdagent/default.nix +++ b/pkgs/applications/virtualization/spice-vdagent/default.nix @@ -1,4 +1,4 @@ -{stdenv, fetchurl, pkgconfig, alsaLib, spice_protocol, glib, +{stdenv, fetchurl, pkgconfig, alsaLib, spice-protocol, glib, libpciaccess, libxcb, libXrandr, libXinerama, libXfixes, dbus, systemd}: stdenv.mkDerivation rec { @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { substituteInPlace data/spice-vdagent.desktop --replace /usr $out ''; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ alsaLib spice_protocol glib + buildInputs = [ alsaLib spice-protocol glib libpciaccess libxcb libXrandr libXinerama libXfixes dbus systemd ] ; meta = { diff --git a/pkgs/applications/virtualization/virt-manager/default.nix b/pkgs/applications/virtualization/virt-manager/default.nix index 527371791082..f913ab688cf8 100644 --- a/pkgs/applications/virtualization/virt-manager/default.nix +++ b/pkgs/applications/virtualization/virt-manager/default.nix @@ -1,20 +1,20 @@ { stdenv, fetchurl, python2Packages, intltool, file -, wrapGAppsHook, virtinst, gtkvnc, vte, avahi, dconf +, wrapGAppsHook, gtkvnc, vte, avahi, dconf , gobjectIntrospection, libvirt-glib, system-libvirt -, gsettings_desktop_schemas, glib, libosinfo, gnome3 -, spiceSupport ? true, spice_gtk ? null +, gsettings-desktop-schemas, glib, libosinfo, gnome3, gtk3 +, spiceSupport ? true, spice-gtk ? null }: with stdenv.lib; python2Packages.buildPythonApplication rec { name = "virt-manager-${version}"; - version = "1.4.3"; + version = "1.5.0"; namePrefix = ""; src = fetchurl { url = "http://virt-manager.org/download/sources/virt-manager/${name}.tar.gz"; - sha256 = "093azs8p4p7y4nf5j25xpsvdxww7gky1g0hs8mkcvmpxl2wjd0jj"; + sha256 = "d43a7b99d40acdcb8e9455e7874beee132cfcfce9eed0d6252e8f254a82cadc6"; }; nativeBuildInputs = [ @@ -23,15 +23,13 @@ python2Packages.buildPythonApplication rec { ]; buildInputs = - [ libvirt-glib vte virtinst dconf gtkvnc gnome3.defaultIconTheme avahi - gsettings_desktop_schemas libosinfo - ] ++ optional spiceSupport spice_gtk; + [ libvirt-glib vte dconf gtkvnc gnome3.defaultIconTheme avahi + gsettings-desktop-schemas libosinfo gtk3 + ] ++ optional spiceSupport spice-gtk; propagatedBuildInputs = with python2Packages; - [ eventlet greenlet gflags netaddr carrot routes PasteDeploy - m2crypto ipy twisted distutils_extra simplejson - cheetah lockfile httplib2 urlgrabber pyGtkGlade dbus-python - pygobject3 ipaddr mox libvirt libxml2 requests + [ + pygobject3 ipaddr libvirt libxml2 requests ]; patchPhase = '' @@ -63,6 +61,8 @@ python2Packages.buildPythonApplication rec { manages Xen and LXC (linux containers). ''; license = licenses.gpl2; + # exclude Darwin since libvirt-glib currently doesn't build there + platforms = platforms.linux; maintainers = with maintainers; [ qknight offline fpletz ]; }; } diff --git a/pkgs/applications/virtualization/virt-manager/qt.nix b/pkgs/applications/virtualization/virt-manager/qt.nix index 4c5000f0208c..9316496a547e 100644 --- a/pkgs/applications/virtualization/virt-manager/qt.nix +++ b/pkgs/applications/virtualization/virt-manager/qt.nix @@ -1,17 +1,17 @@ { mkDerivation, lib, fetchFromGitHub, cmake, pkgconfig -, qtbase, qtmultimedia, qtsvg -, libvncserver, libvirt, pcre, pixman, qtermwidget, spice_gtk, spice_protocol +, qtbase, qtmultimedia, qtsvg, qttools +, libvncserver, libvirt, pcre, pixman, qtermwidget, spice-gtk, spice-protocol }: mkDerivation rec { name = "virt-manager-qt-${version}"; - version = "0.48.79"; + version = "0.52.80"; src = fetchFromGitHub { owner = "F1ash"; repo = "qt-virt-manager"; rev = "${version}"; - sha256 = "1mzncca9blc742vb77gyfza0sd1rby3qy5yl4x19nkllid92jn6k"; + sha256 = "131rs6c90vdf1j40qj7k6s939y8la9ma0q3labxb7ac3r8hvhn6a"; }; cmakeFlags = [ @@ -21,10 +21,10 @@ mkDerivation rec { buildInputs = [ qtbase qtmultimedia qtsvg - libvirt libvncserver pcre pixman qtermwidget spice_gtk spice_protocol + libvirt libvncserver pcre pixman qtermwidget spice-gtk spice-protocol ]; - nativeBuildInputs = [ cmake pkgconfig ]; + nativeBuildInputs = [ cmake pkgconfig qttools ]; enableParallelBuilding = true; diff --git a/pkgs/applications/virtualization/virt-viewer/default.nix b/pkgs/applications/virtualization/virt-viewer/default.nix index 2f5a6192c86c..eb48e1d3d300 100644 --- a/pkgs/applications/virtualization/virt-viewer/default.nix +++ b/pkgs/applications/virtualization/virt-viewer/default.nix @@ -1,13 +1,13 @@ { stdenv, fetchurl, pkgconfig, intltool, glib, libxml2, gtk3, gtkvnc, gmp -, libgcrypt, gnupg, cyrus_sasl, shared_mime_info, libvirt, yajl, xen -, gsettings_desktop_schemas, makeWrapper, libvirt-glib, libcap_ng, numactl +, libgcrypt, gnupg, cyrus_sasl, shared-mime-info, libvirt, yajl, xen +, gsettings-desktop-schemas, makeWrapper, libvirt-glib, libcap_ng, numactl , libapparmor , spiceSupport ? true -, spice_gtk ? null, spice_protocol ? null, libcap ? null, gdbm ? null +, spice-gtk ? null, spice-protocol ? null, libcap ? null, gdbm ? null }: assert spiceSupport -> - spice_gtk != null && spice_protocol != null && libcap != null && gdbm != null; + spice-gtk != null && spice-protocol != null && libcap != null && gdbm != null; with stdenv.lib; @@ -23,13 +23,13 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig intltool ]; buildInputs = [ - glib libxml2 gtk3 gtkvnc gmp libgcrypt gnupg cyrus_sasl shared_mime_info - libvirt yajl gsettings_desktop_schemas makeWrapper libvirt-glib + glib libxml2 gtk3 gtkvnc gmp libgcrypt gnupg cyrus_sasl shared-mime-info + libvirt yajl gsettings-desktop-schemas makeWrapper libvirt-glib libcap_ng numactl libapparmor ] ++ optionals stdenv.isx86_64 [ xen ] ++ optionals spiceSupport [ - spice_gtk spice_protocol libcap gdbm + spice-gtk spice-protocol libcap gdbm ]; postInstall = '' diff --git a/pkgs/applications/virtualization/xen/4.5.nix b/pkgs/applications/virtualization/xen/4.5.nix index 22799a7af8e7..48f74ce72e5e 100644 --- a/pkgs/applications/virtualization/xen/4.5.nix +++ b/pkgs/applications/virtualization/xen/4.5.nix @@ -9,7 +9,7 @@ , withLibHVM ? true # qemu -, udev, pciutils, xorg, SDL, pixman, acl, glusterfs, spice_protocol, usbredir +, udev, pciutils, xorg, SDL, pixman, acl, glusterfs, spice-protocol, usbredir , alsaLib , ... } @ args: @@ -29,7 +29,7 @@ let }); qemuDeps = [ - udev pciutils xorg.libX11 SDL pixman acl glusterfs spice_protocol usbredir + udev pciutils xorg.libX11 SDL pixman acl glusterfs spice-protocol usbredir alsaLib ]; diff --git a/pkgs/applications/virtualization/xen/4.8.nix b/pkgs/applications/virtualization/xen/4.8.nix index b1fcf36a46c1..be6c4e3fcc7a 100644 --- a/pkgs/applications/virtualization/xen/4.8.nix +++ b/pkgs/applications/virtualization/xen/4.8.nix @@ -8,7 +8,7 @@ , withLibHVM ? true # qemu -, udev, pciutils, xorg, SDL, pixman, acl, glusterfs, spice_protocol, usbredir +, udev, pciutils, xorg, SDL, pixman, acl, glusterfs, spice-protocol, usbredir , alsaLib , ... } @ args: @@ -30,7 +30,7 @@ let xsa = import ./xsa-patches.nix { inherit fetchpatch; }; qemuDeps = [ - udev pciutils xorg.libX11 SDL pixman acl glusterfs spice_protocol usbredir + udev pciutils xorg.libX11 SDL pixman acl glusterfs spice-protocol usbredir alsaLib ]; in diff --git a/pkgs/applications/window-managers/awesome/default.nix b/pkgs/applications/window-managers/awesome/default.nix index 2808c8552eff..c23284d0b527 100644 --- a/pkgs/applications/window-managers/awesome/default.nix +++ b/pkgs/applications/window-managers/awesome/default.nix @@ -4,7 +4,7 @@ , compton, procps, iproute, coreutils, curl, alsaUtils, findutils, xterm , which, dbus, nettools, git, asciidoc, doxygen , xmlto, docbook_xml_dtd_45, docbook_xsl, findXMLCatalogs -, libxkbcommon, xcbutilxrm, hicolor_icon_theme +, libxkbcommon, xcbutilxrm, hicolor-icon-theme }: with luaPackages; stdenv.mkDerivation rec { @@ -29,7 +29,7 @@ with luaPackages; stdenv.mkDerivation rec { docbook_xsl findXMLCatalogs ]; - propagatedUserEnvPkgs = [ hicolor_icon_theme ]; + propagatedUserEnvPkgs = [ hicolor-icon-theme ]; buildInputs = [ cairo librsvg dbus gdk_pixbuf gobjectIntrospection git lgi libpthreadstubs libstartup_notification libxdg_basedir lua nettools pango xcb-util-cursor diff --git a/pkgs/applications/window-managers/kbdd/default.nix b/pkgs/applications/window-managers/kbdd/default.nix index 1c6b8a84c952..7aa604690f9a 100644 --- a/pkgs/applications/window-managers/kbdd/default.nix +++ b/pkgs/applications/window-managers/kbdd/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchgit, pkgconfig, dbus_glib, autoreconfHook, xorg }: +{ stdenv, fetchgit, pkgconfig, dbus-glib, autoreconfHook, xorg }: stdenv.mkDerivation rec { name = "kbdd"; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ autoreconfHook pkgconfig ]; - buildInputs = [ xorg.libX11 dbus_glib ]; + buildInputs = [ xorg.libX11 dbus-glib ]; meta = { description = "Simple daemon and library to make per window layout using XKB"; diff --git a/pkgs/applications/window-managers/lemonbar/default.nix b/pkgs/applications/window-managers/lemonbar/default.nix index 27cb564d2c6b..ed34e75f35db 100644 --- a/pkgs/applications/window-managers/lemonbar/default.nix +++ b/pkgs/applications/window-managers/lemonbar/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, perl, libxcb }: stdenv.mkDerivation rec { - name = "lemonbar-1.2"; + name = "lemonbar-1.3"; src = fetchurl { - url = "https://github.com/LemonBoy/bar/archive/v1.2.tar.gz"; - sha256 = "1smz8lh930bnb6a4lrm07l3z2k071kc8p2pljk5wsrch3x2xhimq"; + url = "https://github.com/LemonBoy/bar/archive/v1.3.tar.gz"; + sha256 = "0zd3v8ys4jzi60pm3wq7p3pbbd5y0acimgiq46qx1ckmwg2q9rza"; }; buildInputs = [ libxcb perl ]; diff --git a/pkgs/applications/window-managers/qtile/default.nix b/pkgs/applications/window-managers/qtile/default.nix index 79752829e2a5..f889bf29f71a 100644 --- a/pkgs/applications/window-managers/qtile/default.nix +++ b/pkgs/applications/window-managers/qtile/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchFromGitHub, python27Packages, glib, cairo, pango, pkgconfig, libxcb, xcbutilcursor }: let cairocffi-xcffib = python27Packages.cairocffi.override { - pythonPath = [ python27Packages.xcffib ]; + withXcffib = true; }; in diff --git a/pkgs/applications/window-managers/stumpwm/default.nix b/pkgs/applications/window-managers/stumpwm/default.nix index 215b8c38ece4..e7427fa7763a 100644 --- a/pkgs/applications/window-managers/stumpwm/default.nix +++ b/pkgs/applications/window-managers/stumpwm/default.nix @@ -90,7 +90,7 @@ stdenv.mkDerivation rec { ''; passthru = { - inherit sbcl lispPackages; + inherit sbcl lispPackages contrib; }; meta = with stdenv.lib; { diff --git a/pkgs/applications/window-managers/xmonad-log-applet/default.nix b/pkgs/applications/window-managers/xmonad-log-applet/default.nix index 906ba0efda24..def5766e5ee1 100644 --- a/pkgs/applications/window-managers/xmonad-log-applet/default.nix +++ b/pkgs/applications/window-managers/xmonad-log-applet/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, pkgconfig, autoreconfHook, glib, dbus_glib +{ stdenv, fetchFromGitHub, pkgconfig, autoreconfHook, glib, dbus-glib , desktopSupport , gtk2, gnome2_panel, GConf2 , libxfce4util, xfce4panel @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { }; buildInputs = with stdenv.lib; - [ glib dbus_glib ] + [ glib dbus-glib ] ++ optionals (desktopSupport == "gnome2") [ gtk2 gnome2_panel GConf2 ] # TODO: no idea where to find libpanelapplet-4.0 ++ optionals (desktopSupport == "gnome3") [ ] diff --git a/pkgs/build-support/bintools-wrapper/default.nix b/pkgs/build-support/bintools-wrapper/default.nix index 48fd8665cb47..8e94ccfa49bc 100644 --- a/pkgs/build-support/bintools-wrapper/default.nix +++ b/pkgs/build-support/bintools-wrapper/default.nix @@ -58,7 +58,7 @@ let else if (with targetPlatform; isArm && isLinux) then "${libc_lib}/lib/ld-linux*.so.3" else if targetPlatform.system == "aarch64-linux" then "${libc_lib}/lib/ld-linux-aarch64.so.1" else if targetPlatform.system == "powerpc-linux" then "${libc_lib}/lib/ld.so.1" - else if targetPlatform.system == "mips64el-linux" then "${libc_lib}/lib/ld.so.1" + else if targetPlatform.isMips then "${libc_lib}/lib/ld.so.1" else if targetPlatform.isDarwin then "/usr/lib/dyld" else if stdenv.lib.hasSuffix "pc-gnu" targetPlatform.config then "ld.so.1" else null; @@ -171,13 +171,20 @@ stdenv.mkDerivation { else if targetPlatform.isWindows then "pe" else "elf" + toString targetPlatform.parsed.cpu.bits; endianPrefix = if targetPlatform.isBigEndian then "big" else "little"; + sep = optionalString (!targetPlatform.isMips) "-"; arch = /**/ if targetPlatform.isAarch64 then endianPrefix + "aarch64" else if targetPlatform.isArm then endianPrefix + "arm" else if targetPlatform.isx86_64 then "x86-64" else if targetPlatform.isi686 then "i386" + else if targetPlatform.isMips then { + "mips" = "btsmipn32"; # n32 variant + "mipsel" = "ltsmipn32"; # n32 variant + "mips64" = "btsmip"; + "mips64el" = "ltsmip"; + }.${targetPlatform.parsed.cpu.name} else throw "unknown emulation for platform: " + targetPlatform.config; - in targetPlatform.platform.bfdEmulation or (fmt + "-" + arch); + in targetPlatform.platform.bfdEmulation or (fmt + sep + arch); depsTargetTargetPropagated = extraPackages; diff --git a/pkgs/build-support/rust/default-crate-overrides.nix b/pkgs/build-support/rust/default-crate-overrides.nix index 346fd0e7908f..488fcb943721 100644 --- a/pkgs/build-support/rust/default-crate-overrides.nix +++ b/pkgs/build-support/rust/default-crate-overrides.nix @@ -1,5 +1,5 @@ { stdenv, pkgconfig, curl, darwin, libiconv, libgit2, libssh2, - openssl, sqlite, zlib, dbus_libs, dbus_glib, gdk_pixbuf, cairo, python3, + openssl, sqlite, zlib, dbus_libs, dbus-glib, gdk_pixbuf, cairo, python3, libsodium, postgresql, ... }: let @@ -45,13 +45,13 @@ in buildInputs = [ pkgconfig dbus_libs ]; }; gobject-sys = attrs: { - buildInputs = [ dbus_glib ]; + buildInputs = [ dbus-glib ]; }; gio-sys = attrs: { - buildInputs = [ dbus_glib ]; + buildInputs = [ dbus-glib ]; }; gdk-pixbuf-sys = attrs: { - buildInputs = [ dbus_glib ]; + buildInputs = [ dbus-glib ]; }; gdk-pixbuf = attrs: { buildInputs = [ gdk_pixbuf ]; diff --git a/pkgs/build-support/rust/fetchcargo.nix b/pkgs/build-support/rust/fetchcargo.nix index d03d85c07888..42a3ac27cb5b 100644 --- a/pkgs/build-support/rust/fetchcargo.nix +++ b/pkgs/build-support/rust/fetchcargo.nix @@ -21,6 +21,8 @@ stdenv.mkDerivation { export CARGO_HOME=$(mktemp -d cargo-home.XXX) + ${cargoUpdateHook} + cargo vendor cp -ar vendor $out diff --git a/pkgs/build-support/safe-discard-string-context.nix b/pkgs/build-support/safe-discard-string-context.nix deleted file mode 100644 index 293a15295d55..000000000000 --- a/pkgs/build-support/safe-discard-string-context.nix +++ /dev/null @@ -1,14 +0,0 @@ -# | Discard the context of a string while ensuring that expected path -# validity invariants hold. -# -# This relies on import-from-derivation, but it is only useful in -# contexts where the string is going to be used in an -# import-from-derivation anyway. -# -# safeDiscardStringContext : String → String -{ writeText }: s: - builtins.seq - (import (writeText - "discard.nix" - "${builtins.substring 0 0 s}null\n")) - (builtins.unsafeDiscardStringContext s) diff --git a/pkgs/build-support/vm/default.nix b/pkgs/build-support/vm/default.nix index 642365bdeb5c..8ab1fbc88731 100644 --- a/pkgs/build-support/vm/default.nix +++ b/pkgs/build-support/vm/default.nix @@ -748,571 +748,85 @@ rec { rpmDistros = { - fedora2i386 = { - name = "fedora-core-2-i386"; - fullName = "Fedora Core 2 (i386)"; - packagesList = fetchurl { - url = mirror://fedora/linux/core/2/i386/os/repodata/primary.xml.gz; - sha256 = "1nq1k2k0nzkii737cka301f0vbd2ix2wsfvi6bblpi748q6h2w4k"; + # Note: no i386 release for Fedora >= 26 + fedora26x86_64 = + let version = "26"; + in rec { + name = "fedora-${version}-x86_64"; + fullName = "Fedora ${version} (x86_64)"; + packagesList = fetchurl rec { + url = "mirror://fedora/linux/releases/${version}/Everything/x86_64/os/repodata/${sha256}-primary.xml.gz"; + sha256 = "880055a50c05b20641530d09b23f64501a000b2f92fe252417c530178730a95e"; + }; + urlPrefix = "mirror://fedora/linux/releases/${version}/Everything/x86_64/os"; + archs = ["noarch" "x86_64"]; + packages = commonFedoraPackages ++ [ "cronie" "util-linux" ]; + unifiedSystemDir = true; }; - urlPrefix = mirror://fedora/linux/core/2/i386/os; - runScripts = false; - packages = commonFedoraPackages; - }; - fedora3i386 = { - name = "fedora-core-3-i386"; - fullName = "Fedora Core 3 (i386)"; - packagesList = fetchurl { - url = mirror://fedora/linux/core/3/i386/os/repodata/primary.xml.gz; - sha256 = "13znspn4g1bkjkk47393k9chswgzl6nx1n0q6h2wrw52c7d9nw9i"; + fedora27x86_64 = + let version = "27"; + in rec { + name = "fedora-${version}-x86_64"; + fullName = "Fedora ${version} (x86_64)"; + packagesList = fetchurl rec { + url = "mirror://fedora/linux/releases/${version}/Everything/x86_64/os/repodata/${sha256}-primary.xml.gz"; + sha256 = "48986ce4583cd09825c6d437150314446f0f49fa1a1bd62dcfa1085295030fe9"; + }; + urlPrefix = "mirror://fedora/linux/releases/${version}/Everything/x86_64/os"; + archs = ["noarch" "x86_64"]; + packages = commonFedoraPackages ++ [ "cronie" "util-linux" ]; + unifiedSystemDir = true; }; - urlPrefix = mirror://fedora/linux/core/3/i386/os; - archs = ["noarch" "i386" "i586"]; - runScripts = false; - packages = commonFedoraPackages; - }; - fedora5i386 = { - name = "fedora-core-5-i386"; - fullName = "Fedora Core 5 (i386)"; - packagesList = fetchurl { - url = mirror://fedora/linux/core/5/i386/os/repodata/primary.xml.gz; - sha256 = "0lfk4mzrpiyls8h7k9ckc3vgywbmg05zsr4ag6qakgnv9gljijig"; + centos6i386 = + let version = "6.9"; + in rec { + name = "centos-${version}-i386"; + fullName = "CentOS ${version} (i386)"; + # N.B. Switch to vault.centos.org when the next release comes out + # urlPrefix = "http://vault.centos.org/${version}/os/i386"; + urlPrefix = "http://mirror.centos.org/centos-6/${version}/os/i386"; + packagesList = fetchurl rec { + url = "${urlPrefix}/repodata/${sha256}-primary.xml.gz"; + sha256 = "b826a45082ef68340325c0855f3d2e5d5a4d0f77d28ba3b871791d6f14a97aeb"; + }; + archs = ["noarch" "i386"]; + packages = commonCentOSPackages ++ [ "procps" ]; }; - urlPrefix = mirror://fedora/linux/core/5/i386/os; - packages = commonFedoraPackages ++ [ "util-linux" ]; - }; - fedora7i386 = { - name = "fedora-7-i386"; - fullName = "Fedora 7 (i386)"; - packagesList = fetchurl { - url = mirror://fedora/linux/releases/7/Everything/i386/os/repodata/primary.xml.gz; - sha256 = "0ssfa01jbwdf566rsxm443yi8f9b1drgfpv51904bark4glgvs33"; + centos6x86_64 = + let version = "6.9"; + in rec { + name = "centos-${version}-x86_64"; + fullName = "CentOS ${version} (x86_64)"; + # N.B. Switch to vault.centos.org when the next release comes out + # urlPrefix = "http://vault.centos.org/${version}/os/x86_64"; + urlPrefix = "http://mirror.centos.org/centos-6/${version}/os/x86_64"; + packagesList = fetchurl rec { + url = "${urlPrefix}/repodata/${sha256}-primary.xml.gz"; + sha256 = "ed2b2d4ac98d774d4cd3e91467e1532f7e8b0275cfc91a0d214b532dcaf1e979"; + }; + archs = ["noarch" "x86_64"]; + packages = commonCentOSPackages ++ [ "procps" ]; }; - urlPrefix = mirror://fedora/linux/releases/7/Everything/i386/os; - packages = commonFedoraPackages; - }; - - fedora8i386 = { - name = "fedora-8-i386"; - fullName = "Fedora 8 (i386)"; - packagesList = fetchurl { - url = mirror://fedora/linux/releases/8/Everything/i386/os/repodata/primary.xml.gz; - sha256 = "0kwf0jcp63pygpvgvwl4w58pph24xbcy6db6fnq2f3ly5myhz53n"; - }; - urlPrefix = http://archives.fedoraproject.org/pub/archive/fedora/linux/releases/8/Everything/i386/os; - packages = commonFedoraPackages; - }; - - fedora8x86_64 = { - name = "fedora-8-x86_64"; - fullName = "Fedora 8 (x86_64)"; - packagesList = fetchurl { - url = mirror://fedora/linux/releases/8/Everything/x86_64/os/repodata/primary.xml.gz; - sha256 = "11bfmpy3nz82zzmj5lfravvzlw514v4718adi4b06ps9zv3zpy8r"; - }; - urlPrefix = http://archives.fedoraproject.org/pub/archive/fedora/linux/releases/8/Everything/x86_64/os; - packages = commonFedoraPackages; - archs = ["noarch" "x86_64"]; - }; - - fedora9i386 = { - name = "fedora-9-i386"; - fullName = "Fedora 9 (i386)"; - packagesList = fetchurl { - url = mirror://fedora/linux/releases/9/Everything/i386/os/repodata/primary.xml.gz; - sha256 = "1qd7wb5hfxg4mkpf4k3w49hy0qqf704dqlj3igaibyzmrn9rvk7h"; - }; - urlPrefix = mirror://fedora/linux/releases/9/Everything/i386/os; - packages = commonFedoraPackages ++ [ "cronie" "util-linux-ng" ]; - }; - - fedora9x86_64 = { - name = "fedora-9-x86_64"; - fullName = "Fedora 9 (x86_64)"; - packagesList = fetchurl { - url = mirror://fedora/linux/releases/9/Everything/x86_64/os/repodata/primary.xml.gz; - sha256 = "1qv68i5s6gis4fbj4lxkibx8zxw5kqxapk95lvm76ml59gm7axxx"; - }; - urlPrefix = mirror://fedora/linux/releases/9/Everything/x86_64/os; - archs = ["noarch" "x86_64"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux-ng" ]; - }; - - fedora10i386 = { - name = "fedora-10-i386"; - fullName = "Fedora 10 (i386)"; - packagesList = fetchurl { - url = mirror://fedora/linux/releases/10/Everything/i386/os/repodata/beeea88d162e76993c25b9dd8139868274ee7fa1-primary.xml.gz; - sha256 = "17lyvzqjsxw3ll7726dpg14f9jc2p3fz5cr5cwd8hp3rkm5nfclv"; - }; - urlPrefix = mirror://fedora/linux/releases/10/Everything/i386/os; - packages = commonFedoraPackages ++ [ "cronie" "util-linux-ng" ]; - }; - - fedora10x86_64 = { - name = "fedora-10-x86_64"; - fullName = "Fedora 10 (x86_64)"; - packagesList = fetchurl { - url = mirror://fedora/linux/releases/10/Everything/x86_64/os/repodata/7958210175e86b5cc843cf4bd0bc8659e445e261-primary.xml.gz; - sha256 = "02pzqmb26zmmzdni11dip3bar4kr54ddsrq9z4vda7ldwwkqd3py"; - }; - urlPrefix = mirror://fedora/linux/releases/10/Everything/x86_64/os; - archs = ["noarch" "x86_64"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux-ng" ]; - }; - - fedora11i386 = { - name = "fedora-11-i386"; - fullName = "Fedora 11 (i386)"; - packagesList = fetchurl { - url = mirror://fedora/linux/releases/11/Everything/i386/os/repodata/4a59e5ec0a3a55979f2045c9e6824b87feb1c8c3df12d893e9ee3057ba482485-primary.xml.gz; - sha256 = "4a59e5ec0a3a55979f2045c9e6824b87feb1c8c3df12d893e9ee3057ba482485"; - }; - urlPrefix = mirror://fedora/linux/releases/11/Everything/i386/os; - archs = ["noarch" "i386" "i586"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux-ng" ]; - }; - - fedora11x86_64 = { - name = "fedora-11-x86_64"; - fullName = "Fedora 11 (x86_64)"; - packagesList = fetchurl { - url = mirror://fedora/linux/releases/11/Everything/x86_64/os/repodata/b3e9f0d474893d14b0352deddabc7e3ee017d038614e82d7c6d7717510d6ce7e-primary.xml.gz; - sha256 = "b3e9f0d474893d14b0352deddabc7e3ee017d038614e82d7c6d7717510d6ce7e"; - }; - urlPrefix = mirror://fedora/linux/releases/11/Everything/x86_64/os; - archs = ["noarch" "x86_64"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux-ng" ]; - }; - - fedora12i386 = { - name = "fedora-12-i386"; - fullName = "Fedora 12 (i386)"; - packagesList = fetchurl { - url = mirror://fedora/linux/releases/12/Everything/i386/os/repodata/e27694b7824ee6bbf87af629950e6953eaddf91c73e489f5de690a7ecb9d726e-primary.xml.gz; - sha256 = "e27694b7824ee6bbf87af629950e6953eaddf91c73e489f5de690a7ecb9d726e"; - }; - urlPrefix = mirror://fedora/linux/releases/12/Everything/i386/os; - archs = ["noarch" "i386" "i586" "i686"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux-ng" ]; - }; - - fedora12x86_64 = { - name = "fedora-12-x86_64"; - fullName = "Fedora 12 (x86_64)"; - packagesList = fetchurl { - url = mirror://fedora/linux/releases/12/Everything/x86_64/os/repodata/6b142ef02acbc77f405fbfdedd82451e692a01201471665052a0e00ba8ac0959-primary.xml.gz; - sha256 = "6b142ef02acbc77f405fbfdedd82451e692a01201471665052a0e00ba8ac0959"; - }; - urlPrefix = mirror://fedora/linux/releases/12/Everything/x86_64/os; - archs = ["noarch" "x86_64"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux-ng" ]; - }; - - fedora13i386 = { - name = "fedora-13-i386"; - fullName = "Fedora 13 (i386)"; - packagesList = fetchurl { - url = mirror://fedora/linux/releases/13/Everything/i386/os/repodata/be70ac9e1031fd34222b2ec6cc8a337bc6fabd1d06969990955c5f358d138e35-primary.xml.gz; - sha256 = "be70ac9e1031fd34222b2ec6cc8a337bc6fabd1d06969990955c5f358d138e35"; - }; - urlPrefix = mirror://fedora/linux/releases/13/Everything/i386/os; - archs = ["noarch" "i386" "i586" "i686"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux-ng" ]; - }; - - fedora13x86_64 = { - name = "fedora-13-x86_64"; - fullName = "Fedora 13 (x86_64)"; - packagesList = fetchurl { - url = mirror://fedora/linux/releases/13/Everything/x86_64/os/repodata/01996e6d20b0a4bf3390767bd26709932e42c54422b39005ec2dd4ef2e8b0f3a-primary.xml.gz; - sha256 = "01996e6d20b0a4bf3390767bd26709932e42c54422b39005ec2dd4ef2e8b0f3a"; - }; - urlPrefix = mirror://fedora/linux/releases/13/Everything/x86_64/os; - archs = ["noarch" "x86_64"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux-ng" ]; - }; - - fedora16i386 = { - name = "fedora-16-i386"; - fullName = "Fedora 16 (i386)"; - packagesList = fetchurl { - url = mirror://fedora/linux/releases/16/Everything/i386/os/repodata/8d5e9b291748d8254e1e66ad2d35bdb7e020d8c2c6a84f928595597b7e546118-primary.xml.gz; - sha256 = "8d5e9b291748d8254e1e66ad2d35bdb7e020d8c2c6a84f928595597b7e546118"; - }; - urlPrefix = mirror://fedora/linux/releases/16/Everything/i386/os; - archs = ["noarch" "i386" "i586" "i686"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux" ]; - }; - - fedora16x86_64 = { - name = "fedora-16-x86_64"; - fullName = "Fedora 16 (x86_64)"; - packagesList = fetchurl { - url = mirror://fedora/linux/releases/16/Everything/x86_64/os/repodata/3fffacc6006d9b4782e57f3f11fcb44ab2a1abf6625e4afb4bf6a1e6475dd107-primary.xml.gz; - sha256 = "3fffacc6006d9b4782e57f3f11fcb44ab2a1abf6625e4afb4bf6a1e6475dd107"; - }; - urlPrefix = mirror://fedora/linux/releases/16/Everything/x86_64/os; - archs = ["noarch" "x86_64"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux" ]; - }; - - fedora17i386 = { - name = "fedora-17-i386"; - fullName = "Fedora 17 (i386)"; - packagesList = fetchurl { - url = mirror://fedora/linux/releases/17/Everything/i386/os/repodata/82dc1ea6d26e53a367dc6e7472113c4454c9a8ac7c98d4bfb11fd0b6f311450f-primary.xml.gz; - sha256 = "03s527rvdl0zn6zx963wmjlcjm247h8p4x3fviks6lvfsak1xp42"; - }; - urlPrefix = mirror://fedora/linux/releases/17/Everything/i386/os; - archs = ["noarch" "i386" "i586" "i686"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux" ]; - unifiedSystemDir = true; - }; - - fedora17x86_64 = { - name = "fedora-17-x86_64"; - fullName = "Fedora 17 (x86_64)"; - packagesList = fetchurl { - url = mirror://fedora/linux/releases/17/Everything/x86_64/os/repodata/7009de56f1a1c399930fa72094a310a40d38153c96d0b5af443914d3d6a7d811-primary.xml.gz; - sha256 = "04fqlzbd651r8jpvbl4n7hakh3d422ir88571y9rkhx1y5bdw2bh"; - }; - urlPrefix = mirror://fedora/linux/releases/17/Everything/x86_64/os; - archs = ["noarch" "x86_64"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux" ]; - unifiedSystemDir = true; - }; - - fedora18i386 = { - name = "fedora-18-i386"; - fullName = "Fedora 18 (i386)"; - packagesList = fetchurl { - url = mirror://fedora/linux/releases/18/Everything/i386/os/repodata/935f57e61365047b6aee346792bc68bfd24de30874ce5d26bf730a992d36678d-primary.xml.gz; - sha256 = "935f57e61365047b6aee346792bc68bfd24de30874ce5d26bf730a992d36678d"; - }; - urlPrefix = mirror://fedora/linux/releases/18/Everything/i386/os; - archs = ["noarch" "i386" "i586" "i686"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux" ]; - unifiedSystemDir = true; - }; - - fedora18x86_64 = { - name = "fedora-18-x86_64"; - fullName = "Fedora 18 (x86_64)"; - packagesList = fetchurl { - url = mirror://fedora/linux/releases/18/Everything/x86_64/os/repodata/463ac49f2218e404607b2eeb3c04be1a648d90293f4239bbb6a63c2fed672bea-primary.xml.gz; - sha256 = "463ac49f2218e404607b2eeb3c04be1a648d90293f4239bbb6a63c2fed672bea"; - }; - urlPrefix = mirror://fedora/linux/releases/18/Everything/x86_64/os; - archs = ["noarch" "x86_64"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux" ]; - unifiedSystemDir = true; - }; - - fedora19i386 = { - name = "fedora-19-i386"; - fullName = "Fedora 19 (i386)"; - packagesList = fetchurl { - url = mirror://fedora/linux/releases/19/Everything/i386/os/repodata/b72220bcdefff8b38de1c9029a630db4813e073f88c4b080ca274d133e0460d1-primary.xml.gz; - sha256 = "b72220bcdefff8b38de1c9029a630db4813e073f88c4b080ca274d133e0460d1"; - }; - urlPrefix = mirror://fedora/linux/releases/19/Everything/i386/os; - archs = ["noarch" "i386" "i586" "i686"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux" ]; - unifiedSystemDir = true; - }; - - fedora19x86_64 = { - name = "fedora-19-x86_64"; - fullName = "Fedora 19 (x86_64)"; - packagesList = fetchurl { - url = mirror://fedora/linux/releases/19/Everything/x86_64/os/repodata/d3f67da6461748f57a06459e6877fd07858828e256f58f032704186a65430fd3-primary.xml.gz; - sha256 = "d3f67da6461748f57a06459e6877fd07858828e256f58f032704186a65430fd3"; - }; - urlPrefix = mirror://fedora/linux/releases/19/Everything/x86_64/os; - archs = ["noarch" "x86_64"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux" ]; - unifiedSystemDir = true; - }; - - fedora20i386 = { - name = "fedora-20-i386"; - fullName = "Fedora 20 (i386)"; - packagesList = fetchurl { - url = mirror://fedora/linux/releases/20/Everything/i386/os/repodata/ae9c6ae73a12a64227e6b8e7b2d7e1c2a9515bd9c82f2af006c838e7a445dcb9-primary.xml.gz; - sha256 = "1ffw8njfff680vq2lby8v5dm3af2w7bv5rxqwqkl59hj7bknm75f"; - }; - urlPrefix = mirror://fedora/linux/releases/20/Everything/i386/os; - archs = ["noarch" "i386" "i586" "i686"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux" ]; - unifiedSystemDir = true; - }; - - fedora20x86_64 = { - name = "fedora-20-x86_64"; - fullName = "Fedora 20 (x86_64)"; - packagesList = fetchurl { - url = mirror://fedora/linux/releases/20/Everything/x86_64/os/repodata/d7777ea6ec66e1c86c3fe1900adf5bf8d877fb77dd06e439bd76bbbec4e82094-primary.xml.gz; - sha256 = "1510x32bxfvnplwy81nxfzxpgn7qbgghm4717xnciqb6xjk7wxyp"; - }; - urlPrefix = mirror://fedora/linux/releases/20/Everything/x86_64/os; - archs = ["noarch" "x86_64"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux" ]; - unifiedSystemDir = true; - }; - - fedora21i386 = { - name = "fedora-21-i386"; - fullName = "Fedora 21 (i386)"; - packagesList = fetchurl rec { - url = "mirror://fedora/linux/releases/21/Everything/i386/os/repodata/${sha256}-primary.xml.gz"; - sha256 = "a6ad1140adeef65bbc1fdcc7f8f2b356f0d20c71bbe3f1625038e7f43fc44780"; - }; - urlPrefix = mirror://fedora/linux/releases/21/Everything/i386/os; - archs = ["noarch" "i386" "i586" "i686"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux" ]; - unifiedSystemDir = true; - }; - - fedora21x86_64 = { - name = "fedora-21-x86_64"; - fullName = "Fedora 21 (x86_64)"; - packagesList = fetchurl rec { - url = "mirror://fedora/linux/releases/21/Everything/x86_64/os/repodata/${sha256}-primary.xml.gz"; - sha256 = "e2a28baab2ea4632fad93f9f28144cda3458190888fdf7f2acc9bc289f397e96"; - }; - urlPrefix = mirror://fedora/linux/releases/21/Everything/x86_64/os; - archs = ["noarch" "x86_64"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux" ]; - unifiedSystemDir = true; - }; - - fedora23i386 = { - name = "fedora-23-i386"; - fullName = "Fedora 23 (i386)"; - packagesList = fetchurl rec { - url = "mirror://fedora/linux/releases/23/Everything/i386/os/repodata/${sha256}-primary.xml.gz"; - sha256 = "0d1012e6c1f1d694ab5354d95005791ce8de908016d07e5ed0b9dac9b9223492"; - }; - urlPrefix = mirror://fedora/linux/releases/23/Everything/i386/os; - archs = ["noarch" "i386" "i586" "i686"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux" ]; - unifiedSystemDir = true; - }; - - fedora23x86_64 = { - name = "fedora-23-x86_64"; - fullName = "Fedora 23 (x86_64)"; - packagesList = fetchurl rec { - url = "mirror://fedora/linux/releases/23/Everything/x86_64/os/repodata/${sha256}-primary.xml.gz"; - sha256 = "0fa09bb5f82e4a04890b91255f4b34360e38ede964fe8328f7377e36f06bad27"; - }; - urlPrefix = mirror://fedora/linux/releases/23/Everything/x86_64/os; - archs = ["noarch" "x86_64"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux" ]; - unifiedSystemDir = true; - }; - - fedora24i386 = { - name = "fedora-24-i386"; - fullName = "Fedora 24 (i386)"; - packagesList = fetchurl rec { - url = "mirror://fedora/linux/releases/24/Everything/i386/os/repodata/${sha256}-primary.xml.gz"; - sha256 = "6928e251628da7a74b79180739a43784e534eaa744ba4bcb18c847dff541f344"; - }; - urlPrefix = mirror://fedora/linux/releases/24/Everything/i386/os; - archs = ["noarch" "i386" "i586" "i686"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux" ]; - unifiedSystemDir = true; - }; - - fedora24x86_64 = { - name = "fedora-24-x86_64"; - fullName = "Fedora 24 (x86_64)"; - packagesList = fetchurl rec { - url = "mirror://fedora/linux/releases/24/Everything/x86_64/os/repodata/${sha256}-primary.xml.gz"; - sha256 = "8dcc989396ed27fadd252ba9b655019934bc3d9915f186f1f2f27e71eba7b42f"; - }; - urlPrefix = mirror://fedora/linux/releases/24/Everything/x86_64/os; - archs = ["noarch" "x86_64"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux" ]; - unifiedSystemDir = true; - }; - - fedora25i386 = { - name = "fedora-25-i386"; - fullName = "Fedora 25 (i386)"; - packagesList = fetchurl rec { - url = "mirror://fedora/linux/releases/25/Everything/i386/os/repodata/${sha256}-primary.xml.gz"; - sha256 = "4d399e5eebb8d543d50e2da274348280fae07a6efcc469491784582b39d73bba"; - }; - urlPrefix = mirror://fedora/linux/releases/25/Everything/i386/os; - archs = ["noarch" "i386" "i586" "i686"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux" ]; - unifiedSystemDir = true; - }; - - fedora25x86_64 = { - name = "fedora-25-x86_64"; - fullName = "Fedora 25 (x86_64)"; - packagesList = fetchurl rec { - url = "mirror://fedora/linux/releases/25/Everything/x86_64/os/repodata/${sha256}-primary.xml.gz"; - sha256 = "eaea04bff7327c49d90240992dff2be6d451a1758ef83e94825f23d4ff27e868"; - }; - urlPrefix = mirror://fedora/linux/releases/25/Everything/x86_64/os; - archs = ["noarch" "x86_64"]; - packages = commonFedoraPackages ++ [ "cronie" "util-linux" ]; - unifiedSystemDir = true; - }; - - opensuse103i386 = { - name = "opensuse-10.3-i586"; - fullName = "openSUSE 10.3 (i586)"; - packagesList = fetchurl { - url = mirror://opensuse/10.3/repo/oss/suse/repodata/primary.xml.gz; - sha256 = "0zb5kxsb755nqq9i8jdclmanacyf551ncx6a011v9jqphsvyfvd7"; - }; - urlPrefix = mirror://opensuse/10.3/repo/oss/suse/; - archs = ["noarch" "i586"]; - packages = commonOpenSUSEPackages ++ [ "devs" ]; - }; - - opensuse110i386 = { - name = "opensuse-11.0-i586"; - fullName = "openSUSE 11.0 (i586)"; - packagesList = fetchurl { - url = mirror://opensuse/11.0/repo/oss/suse/repodata/primary.xml.gz; - sha256 = "13rv855aj8p3h1zpsji5xa1wpkhgq94gcxzvg05l2b68b15q3mwn"; - }; - urlPrefix = mirror://opensuse/11.0/repo/oss/suse/; - archs = ["noarch" "i586"]; - packages = commonOpenSUSEPackages; - }; - - opensuse110x86_64 = { - name = "opensuse-11.0-x86_64"; - fullName = "openSUSE 11.0 (x86_64)"; - packagesList = fetchurl { - url = mirror://opensuse/11.0/repo/oss/suse/repodata/primary.xml.gz; - sha256 = "13rv855aj8p3h1zpsji5xa1wpkhgq94gcxzvg05l2b68b15q3mwn"; - }; - urlPrefix = mirror://opensuse/11.0/repo/oss/suse/; - archs = ["noarch" "x86_64"]; - packages = commonOpenSUSEPackages; - }; - - opensuse111i386 = { - name = "opensuse-11.1-i586"; - fullName = "openSUSE 11.1 (i586)"; - packagesList = fetchurl { - url = mirror://opensuse/11.1/repo/oss/suse/repodata/primary.xml.gz; - sha256 = "1mfmp9afikj0hci1s8cpwjdr0ycbpfym9gdhci590r9fa75w221j"; - }; - urlPrefix = mirror://opensuse/11.1/repo/oss/suse/; - archs = ["noarch" "i586"]; - packages = commonOpenSUSEPackages; - }; - - opensuse111x86_64 = { - name = "opensuse-11.1-x86_64"; - fullName = "openSUSE 11.1 (x86_64)"; - packagesList = fetchurl { - url = mirror://opensuse/11.1/repo/oss/suse/repodata/primary.xml.gz; - sha256 = "1mfmp9afikj0hci1s8cpwjdr0ycbpfym9gdhci590r9fa75w221j"; - }; - urlPrefix = mirror://opensuse/11.1/repo/oss/suse/; - archs = ["noarch" "x86_64"]; - packages = commonOpenSUSEPackages; - }; - - opensuse132i386 = { - name = "opensuse-13.2-i586"; - fullName = "openSUSE 13.2 (i586)"; - packagesList = fetchurl { - url = mirror://opensuse/13.2/repo/oss/suse/repodata/485e4f44e3c3ef3133accb589480933c2fe48dedfc44a7e5f9d5437cd9122a99-primary.xml.gz; - sha256 = "0klzmk680as4sb6h1wl0ynj0dds3m70qim66wwbiqlnnp6xkf83y"; - }; - urlPrefix = mirror://opensuse/13.2/repo/oss/suse/; - archs = ["noarch" "i586"]; - packages = commonOpenSUSEPackages; - }; - - opensuse132x86_64 = { - name = "opensuse-13.2-x86_64"; - fullName = "openSUSE 13.2 (x86_64)"; - packagesList = fetchurl { - url = mirror://opensuse/13.2/repo/oss/suse/repodata/485e4f44e3c3ef3133accb589480933c2fe48dedfc44a7e5f9d5437cd9122a99-primary.xml.gz; - sha256 = "0klzmk680as4sb6h1wl0ynj0dds3m70qim66wwbiqlnnp6xkf83y"; - }; - urlPrefix = mirror://opensuse/13.2/repo/oss/suse/; - archs = ["noarch" "x86_64"]; - packages = commonOpenSUSEPackages; - }; - - centos65i386 = { - name = "centos-6.5-i386"; - fullName = "CentOS 6.5 (i386)"; - packagesList = fetchurl { - url = http://vault.centos.org/6.5/os/i386/repodata/a89f27cc7d3cea431f3bd605a1e9309c32d5d409abc1b51a7b5c71c05f18a0c2-primary.xml.gz; - sha256 = "1hm031gw0wawgcdbbhdb17adaclw63ls21fn7cgl7siwgp62g7x8"; - }; - urlPrefix = http://vault.centos.org/6.5/os/i386; - archs = ["noarch" "i386"]; - packages = commonCentOSPackages ++ [ "procps" ]; - }; - - centos65x86_64 = { - name = "centos-6.5-x86_64"; - fullName = "CentOS 6.5 (x86_64)"; - packagesList = fetchurl { - url = http://vault.centos.org/6.5/os/x86_64/repodata/3353e378f5cb4bb6c3b3dd2ca266c6d68a1e29c36cf99f76aea3d8e158626024-primary.xml.gz; - sha256 = "0930c9cf3n53mrv9zybcqclix2nnqrka4b6xng1vcjybymwf6lrk"; - }; - urlPrefix = http://vault.centos.org/6.5/os/x86_64/; - archs = ["noarch" "x86_64"]; - packages = commonCentOSPackages ++ [ "procps" ]; - }; # Note: no i386 release for 7.x - centos71x86_64 = { - name = "centos-7.1-x86_64"; - fullName = "CentOS 7.1 (x86_64)"; - packagesList = fetchurl { - url = http://vault.centos.org/7.1.1503/os/x86_64/repodata/1386c5af55bda40669bb5ed91e0a22796c3ed7325367506109b09ea2657f22bd-primary.xml.gz; - sha256 = "1g92gxjs57mh15hm0rsk6bbkwv3r4851xnaypdlhd95xanpwb1hk"; + centos7x86_64 = + let version = "7.4.1708"; + in rec { + name = "centos-${version}-x86_64"; + fullName = "CentOS ${version} (x86_64)"; + # N.B. Switch to vault.centos.org when the next release comes out + # urlPrefix = "http://vault.centos.org/${version}/os/x86_64"; + urlPrefix = "http://mirror.centos.org/centos-7/${version}/os/x86_64"; + packagesList = fetchurl rec { + url = "${urlPrefix}/repodata/${sha256}-primary.xml.gz"; + sha256 = "b686d3a0f337323e656d9387b9a76ce6808b26255fc3a138b1a87d3b1cb95ed5"; + }; + archs = ["noarch" "x86_64"]; + packages = commonCentOSPackages ++ [ "procps-ng" ]; }; - urlPrefix = http://vault.centos.org/7.1.1503/os/x86_64; - archs = ["noarch" "x86_64"]; - packages = commonCentOSPackages ++ [ "procps-ng" ]; - }; - - centos73x86_64 = { - name = "centos-7.3-x86_64"; - fullName = "CentOS 7.3 (x86_64)"; - packagesList = fetchurl { - url = http://vault.centos.org/7.3.1611/os/x86_64/repodata/dd86df27191d231cc6b7c5828fadb63b08db4725aef8e2613351667e649c9ca3-primary.xml.gz; - sha256 = "18wwkij7wrji6dhy5y5f4m3xn21vnsnqz0n5nz31q8qx34kxz1nx"; - }; - urlPrefix = http://vault.centos.org/7.3.1611/os/x86_64; - archs = ["noarch" "x86_64"]; - packages = commonCentOSPackages ++ [ "procps-ng" ]; - }; - - centos74x86_64 = rec { - name = "centos-7.4-x86_64"; - fullName = "CentOS 7.4 (x86_64)"; - # N.B. Switch to vault.centos.org when the next release comes out - urlPrefix = http://mirror.centos.org/centos-7/7.4.1708/os/x86_64; - packagesList = fetchurl { - url = "${urlPrefix}/repodata/b686d3a0f337323e656d9387b9a76ce6808b26255fc3a138b1a87d3b1cb95ed5-primary.xml.gz"; - sha256 = "1mayp4f3nzd8n4wa3hsz4lk8p076djkvk1wkdmjkwcipyfhd71mn"; - }; - archs = ["noarch" "x86_64"]; - packages = commonCentOSPackages ++ [ "procps-ng" ]; - }; }; @@ -1324,207 +838,6 @@ rec { # http://nl.archive.ubuntu.com/ubuntu/dists/{gutsy,hardy}/Release are # wrong, but the SHA-1 and MD5 hashes are correct. Intrepid is fine. - ubuntu710i386 = { - name = "ubuntu-7.10-gutsy-i386"; - fullName = "Ubuntu 7.10 Gutsy (i386)"; - packagesList = fetchurl { - url = mirror://ubuntu/dists/gutsy/main/binary-i386/Packages.bz2; - sha256 = "0fmac8svxq86a4w878g6syczvy5ff4jrdc1gajd3xd8z0dypnw27"; - }; - urlPrefix = mirror://ubuntu; - packages = commonDebianPackages; - }; - - ubuntu804i386 = { - name = "ubuntu-8.04-hardy-i386"; - fullName = "Ubuntu 8.04 Hardy (i386)"; - packagesList = fetchurl { - url = mirror://ubuntu/dists/hardy/main/binary-i386/Packages.bz2; - sha256 = "19132nc9fhdfmgmvn834lk0d8c0n3jv0ndz9inyynh9k6pc8b5hd"; - }; - urlPrefix = mirror://ubuntu; - packages = commonDebianPackages; - }; - - ubuntu804x86_64 = { - name = "ubuntu-8.04-hardy-amd64"; - fullName = "Ubuntu 8.04 Hardy (amd64)"; - packagesList = fetchurl { - url = mirror://ubuntu/dists/hardy/main/binary-amd64/Packages.bz2; - sha256 = "1xjcgh0ydixmim7kgxss0mhfw0sibpgygvgsyac4bdz9m503sj3h"; - }; - urlPrefix = mirror://ubuntu; - packages = commonDebianPackages; - }; - - ubuntu810i386 = { - name = "ubuntu-8.10-intrepid-i386"; - fullName = "Ubuntu 8.10 Intrepid (i386)"; - packagesList = fetchurl { - url = mirror://ubuntu/dists/intrepid/main/binary-i386/Packages.bz2; - sha256 = "70483d40a9e9b74598f2faede7df5d5103ee60055af7374f8db5c7e6017c4cf6"; - }; - urlPrefix = mirror://ubuntu; - packages = commonDebianPackages; - }; - - ubuntu810x86_64 = { - name = "ubuntu-8.10-intrepid-amd64"; - fullName = "Ubuntu 8.10 Intrepid (amd64)"; - packagesList = fetchurl { - url = mirror://ubuntu/dists/intrepid/main/binary-amd64/Packages.bz2; - sha256 = "01b2f3842cbdd5834446ddf91691bcf60f59a726dcefa23fb5b93fdc8ea7e27f"; - }; - urlPrefix = mirror://ubuntu; - packages = commonDebianPackages; - }; - - ubuntu904i386 = { - name = "ubuntu-9.04-jaunty-i386"; - fullName = "Ubuntu 9.04 Jaunty (i386)"; - packagesList = fetchurl { - url = mirror://ubuntu/dists/jaunty/main/binary-i386/Packages.bz2; - sha256 = "72c95e4901ad56ce8791723e2ae40bce2399f306f9956cac80e964011e1948d0"; - }; - urlPrefix = mirror://ubuntu; - packages = commonDebianPackages; - }; - - ubuntu904x86_64 = { - name = "ubuntu-9.04-jaunty-amd64"; - fullName = "Ubuntu 9.04 Jaunty (amd64)"; - packagesList = fetchurl { - url = mirror://ubuntu/dists/jaunty/main/binary-amd64/Packages.bz2; - sha256 = "af760ce04e43f066b8938b1abdeff979a642f940515659ede44f7877ca358ca8"; - }; - urlPrefix = mirror://ubuntu; - packages = commonDebianPackages; - }; - - ubuntu910i386 = { - name = "ubuntu-9.10-karmic-i386"; - fullName = "Ubuntu 9.10 Karmic (i386)"; - packagesList = fetchurl { - url = mirror://ubuntu/dists/karmic/main/binary-i386/Packages.bz2; - sha256 = "6e3e813857496f2af6cd7e6ada06b3398fa067a7992c5fd7e8bd8fa92e3548b7"; - }; - urlPrefix = mirror://ubuntu; - packages = commonDebPackages ++ [ "diff" "mktemp" ]; - }; - - ubuntu910x86_64 = { - name = "ubuntu-9.10-karmic-amd64"; - fullName = "Ubuntu 9.10 Karmic (amd64)"; - packagesList = fetchurl { - url = mirror://ubuntu/dists/karmic/main/binary-amd64/Packages.bz2; - sha256 = "3a604fcb0c135eeb8b95da3e90a8fd4cfeff519b858cd3c9e62ea808cb9fec40"; - }; - urlPrefix = mirror://ubuntu; - packages = commonDebPackages ++ [ "diff" "mktemp" ]; - }; - - ubuntu1004i386 = { - name = "ubuntu-10.04-lucid-i386"; - fullName = "Ubuntu 10.04 Lucid (i386)"; - packagesList = - [ (fetchurl { - url = mirror://ubuntu/dists/lucid/main/binary-i386/Packages.bz2; - sha256 = "0e46596202a68caa754dfe0883f46047525309880c492cdd5e2d0970fcf626aa"; - }) - (fetchurl { - url = mirror://ubuntu/dists/lucid/universe/binary-i386/Packages.bz2; - sha256 = "13nvsb7na9igps2fdbbfpq4y8ihccmcs6x35pfyfp6rkhjgpzigy"; - }) - ]; - urlPrefix = mirror://ubuntu; - packages = commonDebPackages ++ [ "diffutils" "mktemp" ]; - }; - - ubuntu1004x86_64 = { - name = "ubuntu-10.04-lucid-amd64"; - fullName = "Ubuntu 10.04 Lucid (amd64)"; - packagesList = - [ (fetchurl { - url = mirror://ubuntu/dists/lucid/main/binary-amd64/Packages.bz2; - sha256 = "74a8f3192b0eda397d65316e0fa6cd34d5358dced41639e07d9f1047971bfef0"; - }) - (fetchurl { - url = mirror://ubuntu/dists/lucid/universe/binary-amd64/Packages.bz2; - sha256 = "112lbnf8rcsbbh89aci4m6gwac0jy16838aij0av8n076zwkvlj9"; - }) - ]; - urlPrefix = mirror://ubuntu; - packages = commonDebPackages ++ [ "diffutils" "mktemp" ]; - }; - - ubuntu1010i386 = { - name = "ubuntu-10.10-maverick-i386"; - fullName = "Ubuntu 10.10 Maverick (i386)"; - packagesList = - [ (fetchurl { - url = mirror://ubuntu/dists/maverick/main/binary-i386/Packages.bz2; - sha256 = "1qjs4042y03bxbxwjs3pgrs99ba6vqvjaaz6zhaxxaqj1r12dwa0"; - }) - (fetchurl { - url = mirror://ubuntu/dists/maverick/universe/binary-i386/Packages.bz2; - sha256 = "1g5pnhx730wj32221ic8p2q6zcka23knpyg190mvq9x7kflcbfzy"; - }) - ]; - urlPrefix = mirror://ubuntu; - packages = commonDebPackages ++ [ "diffutils" ]; - }; - - ubuntu1010x86_64 = { - name = "ubuntu-10.10-maverick-amd64"; - fullName = "Ubuntu 10.10 Maverick (amd64)"; - packagesList = - [ (fetchurl { - url = mirror://ubuntu/dists/maverick/main/binary-amd64/Packages.bz2; - sha256 = "1p0i4gp1bxd3zvckgnh1hx4vfc23rfgzd19dk5rmi61lzbzzqbgc"; - }) - (fetchurl { - url = mirror://ubuntu/dists/maverick/universe/binary-amd64/Packages.bz2; - sha256 = "0m26viwah29gh47p8m3jpnx6l84dhpwnms29m9bvqn1vwcrgjh0s"; - }) - ]; - urlPrefix = mirror://ubuntu; - packages = commonDebPackages ++ [ "diffutils" ]; - }; - - ubuntu1110i386 = { - name = "ubuntu-11.10-oneiric-i386"; - fullName = "Ubuntu 11.10 Oneiric (i386)"; - packagesList = - [ (fetchurl { - url = mirror://ubuntu/dists/oneiric/main/binary-i386/Packages.bz2; - sha256 = "11r1s76ppi7rwz08i20d7n4ndaj9lb9wsl9k8ww4s1c6agzpwv8a"; - }) - (fetchurl { - url = mirror://ubuntu/dists/oneiric/universe/binary-i386/Packages.bz2; - sha256 = "1dr59j8pjdhk07fpc0x73afcd9630kkdsbabx3bj92q71104yigz"; - }) - ]; - urlPrefix = mirror://ubuntu; - packages = commonDebPackages ++ [ "diffutils" ]; - }; - - ubuntu1110x86_64 = { - name = "ubuntu-11.10-oneiric-amd64"; - fullName = "Ubuntu 11.10 Oneiric (amd64)"; - packagesLists = - [ (fetchurl { - url = mirror://ubuntu/dists/oneiric/main/binary-amd64/Packages.bz2; - sha256 = "07k784gxwaqmyggmzczy9hjkgfp6p6dcs8rhkxw5hfzn0jaf8l2s"; - }) - (fetchurl { - url = mirror://ubuntu/dists/oneiric/universe/binary-amd64/Packages.bz2; - sha256 = "1v3ldxn5jnnfgs863ryd6wl3fsb3glainr1ma2zn2l5vpzhpi2h1"; - }) - ]; - urlPrefix = mirror://ubuntu; - packages = commonDebPackages ++ [ "diffutils" ]; - }; - ubuntu1204i386 = { name = "ubuntu-12.04-precise-i386"; fullName = "Ubuntu 12.04 Precise (i386)"; @@ -1545,7 +858,7 @@ rec { ubuntu1204x86_64 = { name = "ubuntu-12.04-precise-amd64"; fullName = "Ubuntu 12.04 Precise (amd64)"; - packagesList = + packagesLists = [ (fetchurl { url = mirror://ubuntu/dists/precise/main/binary-amd64/Packages.bz2; sha256 = "1aabpn0hdih6cbabyn87yvhccqj44q9k03mqmjsb920iqlckl3fc"; @@ -1559,119 +872,17 @@ rec { packages = commonDebPackages ++ [ "diffutils" ]; }; - ubuntu1210i386 = { - name = "ubuntu-12.10-quantal-i386"; - fullName = "Ubuntu 12.10 Quantal (i386)"; - packagesLists = - [ (fetchurl { - url = mirror://ubuntu/dists/quantal/main/binary-i386/Packages.bz2; - sha256 = "bee3200ac8f037700ccd2311fb8b0de665bd02d46bdb2ae946cf50c5885001c3"; - }) - (fetchurl { - url = mirror://ubuntu/dists/quantal/universe/binary-i386/Packages.bz2; - sha256 = "9933ce12e7830b9c68a4aead08b86fcbb8d6ef0ea1fd133f0cf9d7126ad8c9bd"; - }) - ]; - urlPrefix = mirror://ubuntu; - packages = commonDebPackages ++ [ "diffutils" ]; - }; - - ubuntu1210x86_64 = { - name = "ubuntu-12.10-quantal-amd64"; - fullName = "Ubuntu 12.10 Quantal (amd64)"; - packagesList = - [ (fetchurl { - url = mirror://ubuntu/dists/quantal/main/binary-amd64/Packages.bz2; - sha256 = "ef14073f335ef118ebe1c7d45f5a0c17ef28f72abb57c10b9082ab5e04b5d003"; - }) - (fetchurl { - url = mirror://ubuntu/dists/quantal/universe/binary-amd64/Packages.bz2; - sha256 = "329a98312248c98092f8b91f232fc68fd3e6e2337ea4f348b3785465ae8dae17"; - }) - ]; - urlPrefix = mirror://ubuntu; - packages = commonDebPackages ++ [ "diffutils" ]; - }; - - ubuntu1304i386 = { - name = "ubuntu-13.04-raring-i386"; - fullName = "Ubuntu 13.04 Raring (i386)"; - packagesLists = - [ (fetchurl { - url = mirror://ubuntu/dists/raring/main/binary-i386/Packages.bz2; - sha256 = "b7da6802c5302439d9abf05ebe1ab4c3b82d7be9356f51a12c5bf4994f009181"; - }) - (fetchurl { - url = mirror://ubuntu/dists/raring/universe/binary-i386/Packages.bz2; - sha256 = "c1a59dd9132654194f4470932fd0f1582496465d8f96909b22accaf9f404024a"; - }) - ]; - urlPrefix = mirror://ubuntu; - packages = commonDebPackages ++ [ "diffutils" "libc-bin" ]; - }; - - ubuntu1304x86_64 = { - name = "ubuntu-13.04-raring-amd64"; - fullName = "Ubuntu 13.04 Raring (amd64)"; - packagesList = - [ (fetchurl { - url = mirror://ubuntu/dists/raring/main/binary-amd64/Packages.bz2; - sha256 = "9ee6a67bedbda80b668a868bb81b5b3f30bbabac01f69d2a08961c37c8536356"; - }) - (fetchurl { - url = mirror://ubuntu/dists/raring/universe/binary-amd64/Packages.bz2; - sha256 = "8aba137ae18540a12de03a564c11496431a150ab2d4d1e93e2b4b691fa2a4850"; - }) - ]; - urlPrefix = mirror://ubuntu; - packages = commonDebPackages ++ [ "diffutils" "libc-bin" ]; - }; - - ubuntu1310i386 = { - name = "ubuntu-13.10-saucy-i386"; - fullName = "Ubuntu 13.10 Saucy (i386)"; - packagesLists = - [ (fetchurl { - url = mirror://ubuntu/dists/saucy/main/binary-i386/Packages.bz2; - sha256 = "9b35d44a737e6aa7e1cb5e2b52ba0ed8717c8820b3950c2e7ade07024db9c138"; - }) - (fetchurl { - url = mirror://ubuntu/dists/saucy/universe/binary-i386/Packages.bz2; - sha256 = "897f64c19a742ac8524c17c1b5ec31b33ec8ab20c85463010d8bf04f5d14aa0f"; - }) - ]; - urlPrefix = mirror://ubuntu; - packages = commonDebPackages ++ [ "diffutils" "libc-bin" ]; - }; - - ubuntu1310x86_64 = { - name = "ubuntu-13.10-saucy-amd64"; - fullName = "Ubuntu 13.10 Saucy (amd64)"; - packagesList = - [ (fetchurl { - url = mirror://ubuntu/dists/saucy/main/binary-amd64/Packages.bz2; - sha256 = "d000968f9653d7c25928002b0850fe2da97607682f63a351eb2c89896a219a12"; - }) - (fetchurl { - url = mirror://ubuntu/dists/saucy/universe/binary-amd64/Packages.bz2; - sha256 = "a899ce5513ce8540ce9b8da4c1cd85b16b231900881b3aa559f7ac3182cdbfc8"; - }) - ]; - urlPrefix = mirror://ubuntu; - packages = commonDebPackages ++ [ "diffutils" "libc-bin" ]; - }; - ubuntu1404i386 = { name = "ubuntu-14.04-trusty-i386"; fullName = "Ubuntu 14.04 Trusty (i386)"; packagesLists = [ (fetchurl { url = mirror://ubuntu/dists/trusty/main/binary-i386/Packages.bz2; - sha256 = "fdfc38663915c5cef3029872deb8c3bf52b98092073058086e2f1db0c71ebeb4"; + sha256 = "1d5y3v3v079gdq45hc07ja0bjlmzqfwdwwlq0brwxi8m75k3iz7x"; }) (fetchurl { url = mirror://ubuntu/dists/trusty/universe/binary-i386/Packages.bz2; - sha256 = "2afcf259332d88c5e02f5446c4926edd567ef1a00ce24ca7cb400cbf44e2a90f"; + sha256 = "03x9w92by320rfklrqhcl3qpwmnxds9c8ijl5zhcb21d6dcz5z1a"; }) ]; urlPrefix = mirror://ubuntu; @@ -1681,116 +892,14 @@ rec { ubuntu1404x86_64 = { name = "ubuntu-14.04-trusty-amd64"; fullName = "Ubuntu 14.04 Trusty (amd64)"; - packagesList = + packagesLists = [ (fetchurl { url = mirror://ubuntu/dists/trusty/main/binary-amd64/Packages.bz2; - sha256 = "7095917eb8e4ac9161bc3b2ceeaf86e9265aae7b855a0e15d72096ecb05f1fc2"; + sha256 = "1hhzbyqfr5i0swahwnl5gfp5l9p9hspywb1vpihr3b74p1z935bh"; }) (fetchurl { url = mirror://ubuntu/dists/trusty/universe/binary-amd64/Packages.bz2; - sha256 = "558637eeb8e340b871653e2060effe36e064677eca4eae62d9e4138dd402a610"; - }) - ]; - urlPrefix = mirror://ubuntu; - packages = commonDebPackages ++ [ "diffutils" "libc-bin" ]; - }; - - ubuntu1410i386 = { - name = "ubuntu-14.10-utopic-i386"; - fullName = "Ubuntu 14.10 Utopic (i386)"; - packagesLists = - [ (fetchurl { - url = mirror://ubuntu/dists/utopic/main/binary-i386/Packages.bz2; - sha256 = "dc33a906ccb5625740251da759393d7daace65013d421c79fdd6c99a6490d989"; - }) - (fetchurl { - url = mirror://ubuntu/dists/utopic/universe/binary-i386/Packages.bz2; - sha256 = "e50553c033d9e478507405e63ce7d43c8060368ea851eca0c93b75b72fd85167"; - }) - ]; - urlPrefix = mirror://ubuntu; - packages = commonDebPackages ++ [ "diffutils" "libc-bin" ]; - }; - - ubuntu1410x86_64 = { - name = "ubuntu-14.10-utopic-amd64"; - fullName = "Ubuntu 14.10 Utopic (amd64)"; - packagesList = - [ (fetchurl { - url = mirror://ubuntu/dists/utopic/main/binary-amd64/Packages.bz2; - sha256 = "9650775abec90a24c26dbb03f91a488180309144338f64f7044f7119d60d7182"; - }) - (fetchurl { - url = mirror://ubuntu/dists/utopic/universe/binary-amd64/Packages.bz2; - sha256 = "2acf0e39e64b4fd6d2b68b55c598fc167d7c3cabae233fc31a1e6b69eb6ecc63"; - }) - ]; - urlPrefix = mirror://ubuntu; - packages = commonDebPackages ++ [ "diffutils" "libc-bin" ]; - }; - - ubuntu1504i386 = { - name = "ubuntu-15.04-vivid-i386"; - fullName = "Ubuntu 15.04 Vivid (i386)"; - packagesLists = - [ (fetchurl { - url = mirror://ubuntu/dists/vivid/main/binary-i386/Packages.bz2; - sha256 = "0bf587152fa3fc3524bf3a3caaf46ea43cc640a27b2b448577232f014a3ec1e4"; - }) - (fetchurl { - url = mirror://ubuntu/dists/vivid/universe/binary-i386/Packages.bz2; - sha256 = "3452cff96eb715ca36b73d4d0cdffbf06064cbc30b1097e334a2e493b94c7fac"; - }) - ]; - urlPrefix = mirror://ubuntu; - packages = commonDebPackages ++ [ "diffutils" "libc-bin" ]; - }; - - ubuntu1504x86_64 = { - name = "ubuntu-15.04-vivid-amd64"; - fullName = "Ubuntu 15.04 Vivid (amd64)"; - packagesList = - [ (fetchurl { - url = mirror://ubuntu/dists/vivid/main/binary-amd64/Packages.bz2; - sha256 = "8f22c9bd389822702e65713e816250aa0d5829d6b3d75fd34f068de5f93de1d9"; - }) - (fetchurl { - url = mirror://ubuntu/dists/vivid/universe/binary-amd64/Packages.bz2; - sha256 = "feb88768e245a63ee04b0f3bcfc8899a1f03b2f831646dc2a59e4e58884b5cb9"; - }) - ]; - urlPrefix = mirror://ubuntu; - packages = commonDebPackages ++ [ "diffutils" "libc-bin" ]; - }; - - ubuntu1510i386 = { - name = "ubuntu-15.10-wily-i386"; - fullName = "Ubuntu 15.10 Wily (i386)"; - packagesLists = - [ (fetchurl { - url = mirror://ubuntu/dists/wily/main/binary-i386/Packages.bz2; - sha256 = "ac9821095c63436fd4286539592295dd5de99bc82300f628e7a74111bb5dc370"; - }) - (fetchurl { - url = mirror://ubuntu/dists/wily/universe/binary-i386/Packages.bz2; - sha256 = "8951294f36c0755e945e8c37fdd046319f50553a8987ead1b68b21ffa53c5f7f"; - }) - ]; - urlPrefix = mirror://ubuntu; - packages = commonDebPackages ++ [ "diffutils" "libc-bin" ]; - }; - - ubuntu1510x86_64 = { - name = "ubuntu-15.10-wily-amd64"; - fullName = "Ubuntu 15.10 Wily (amd64)"; - packagesList = - [ (fetchurl { - url = mirror://ubuntu/dists/wily/main/binary-amd64/Packages.bz2; - sha256 = "2877de7674c8c6a410c3ac479e46fec24164a4de250f22b3ff062073e3985013"; - }) - (fetchurl { - url = mirror://ubuntu/dists/wily/universe/binary-amd64/Packages.bz2; - sha256 = "714be7a2fd33b8bb577901c9223039dcc12c130c9244122648ee21a625e2a66d"; + sha256 = "04560ba8s4z4v5iawknagrkn9q1nzvpn081ycmqvhh73p3p3g1jm"; }) ]; urlPrefix = mirror://ubuntu; @@ -1817,7 +926,7 @@ rec { ubuntu1604x86_64 = { name = "ubuntu-16.04-xenial-amd64"; fullName = "Ubuntu 16.04 Xenial (amd64)"; - packagesList = + packagesLists = [ (fetchurl { url = mirror://ubuntu/dists/xenial/main/binary-amd64/Packages.xz; sha256 = "110qnkhjkkwm316fbig3aivm2595ydz6zskc4ld5cr8ngcrqm1bn"; @@ -1831,138 +940,46 @@ rec { packages = commonDebPackages ++ [ "diffutils" "libc-bin" ]; }; - ubuntu1610i386 = { - name = "ubuntu-16.10-yakkety-i386"; - fullName = "Ubuntu 16.10 Yakkety (i386)"; + ubuntu1710i386 = { + name = "ubuntu-17.10-xenial-i386"; + fullName = "Ubuntu 17.10 Xenial (i386)"; packagesLists = [ (fetchurl { - url = mirror://ubuntu/dists/yakkety/main/binary-i386/Packages.xz; - sha256 = "da811f582779a969f738f2366c17e075cf0da3c4f2a4ed1926093a2355fd72ba"; + url = mirror://ubuntu/dists/artful/main/binary-i386/Packages.xz; + sha256 = "18yrj4kqdzm39q0527m97h5ing58hkm9yq9iyj636zh2rclym3c8"; }) (fetchurl { - url = mirror://ubuntu/dists/yakkety/universe/binary-i386/Packages.xz; - sha256 = "5162b0a87173cd5dea7ce2273788befe36f38089d44a2379ed9dd92f76c6b2aa"; + url = mirror://ubuntu/dists/artful/universe/binary-i386/Packages.xz; + sha256 = "1v0njw2w80xfmxi7by76cs8hyxlla5h3gqajlpdw5srjgx2qrm2g"; }) ]; urlPrefix = mirror://ubuntu; packages = commonDebPackages ++ [ "diffutils" "libc-bin" ]; }; - ubuntu1610x86_64 = { - name = "ubuntu-16.10-yakkety-amd64"; - fullName = "Ubuntu 16.10 Yakkety (amd64)"; - packagesList = + ubuntu1710x86_64 = { + name = "ubuntu-17.10-artful-amd64"; + fullName = "Ubuntu 17.10 Artful (amd64)"; + packagesLists = [ (fetchurl { - url = mirror://ubuntu/dists/yakkety/main/binary-amd64/Packages.xz; - sha256 = "356c4cfab0d7f77b75c473cd78b22ee7288f63b24c9739049924dc081dd2e3d1"; + url = mirror://ubuntu/dists/artful/main/binary-amd64/Packages.xz; + sha256 = "104g57j1l3vi8wb5f7rgjvjhf82ccs0vwhc59jfc4ynd51z7fqjk"; }) (fetchurl { - url = mirror://ubuntu/dists/yakkety/universe/binary-amd64/Packages.xz; - sha256 = "a72660f8feffd6978e3b9328c6259b5387ac0b4f33d1029e4a17091ceb5057e6"; + url = mirror://ubuntu/dists/artful/universe/binary-amd64/Packages.xz; + sha256 = "1qzs95wfy9inaskfx9cf1l5yd3aaqwzy72zzi9xyvkxi75k5gcn4"; }) ]; urlPrefix = mirror://ubuntu; packages = commonDebPackages ++ [ "diffutils" "libc-bin" ]; }; - debian40i386 = { - name = "debian-4.0r9-etch-i386"; - fullName = "Debian 4.0r9 Etch (i386)"; - packagesList = fetchurl { - url = mirror://debian/dists/etch/main/binary-i386/Packages.bz2; - sha256 = "40eeeecc35e6895b6eb0bc601e38fe53fc985d1b1f3fea3766f34763d21f206f"; - }; - urlPrefix = mirror://debian; - packages = commonDebianPackages; - }; - - debian40x86_64 = { - name = "debian-4.0r9-etch-amd64"; - fullName = "Debian 4.0r9 Etch (amd64)"; - packagesList = fetchurl { - url = mirror://debian/dists/etch/main/binary-amd64/Packages.bz2; - sha256 = "cf1c4c7d72e0da45797b046011254d2bd83f5ecb7389c7f30d2561be3f5b2e49"; - }; - urlPrefix = mirror://debian; - packages = commonDebianPackages; - }; - - debian50i386 = { - name = "debian-5.0.10-lenny-i386"; - fullName = "Debian 5.0.10 Lenny (i386)"; - packagesList = fetchurl { - url = mirror://debian/dists/lenny/main/binary-i386/Packages.bz2; - sha256 = "fb390cf043a5b6bac50879ce1c0827882abdb560050313a6a326a03a4fc761d6"; - }; - urlPrefix = mirror://debian; - packages = commonDebianPackages; - }; - - debian50x86_64 = { - name = "debian-5.0.10-lenny-amd64"; - fullName = "Debian 5.0.10 Lenny (amd64)"; - packagesList = fetchurl { - url = mirror://debian/dists/lenny/main/binary-amd64/Packages.bz2; - sha256 = "1y4bb3n770fgwsrw8qiwsgf17k0ws2d6jmcfvqv07lj77dyj53wc"; - }; - urlPrefix = mirror://debian; - packages = commonDebianPackages; - }; - - debian60i386 = { - name = "debian-6.0.10-squeeze-i386"; - fullName = "Debian 6.0.10 Squeeze (i386)"; - packagesList = fetchurl { - url = mirror://debian/dists/squeeze/main/binary-i386/Packages.bz2; - sha256 = "c08899011a7a2b0df4da08f91eef3a80d112a247df988b1c966c9fb64c812392"; - }; - urlPrefix = mirror://debian; - packages = commonDebianPackages; - }; - - debian60x86_64 = { - name = "debian-6.0.10-squeeze-amd64"; - fullName = "Debian 6.0.10 Squeeze (amd64)"; - packagesList = fetchurl { - url = mirror://debian/dists/squeeze/main/binary-amd64/Packages.bz2; - sha256 = "3f2ebd5221b9a4bdf7224acf728a51a987c63d32df1bbc20a97f177d2f184045"; - }; - urlPrefix = mirror://debian; - packages = commonDebianPackages; - }; - - # Backward compatibility. - debian70i386 = debian7i386; - debian70x86_64 = debian7x86_64; - - debian7i386 = { - name = "debian-7.11-wheezy-i386"; - fullName = "Debian 7.11 Wheezy (i386)"; - packagesList = fetchurl { - url = mirror://debian/dists/wheezy/main/binary-i386/Packages.bz2; - sha256 = "57ea423dc1c0cc082cae580360f8e7192c9fd60e2ef775a4ce7f48784277462d"; - }; - urlPrefix = mirror://debian; - packages = commonDebianPackages; - }; - - debian7x86_64 = { - name = "debian-7.11-wheezy-amd64"; - fullName = "Debian 7.11 Wheezy (amd64)"; - packagesList = fetchurl { - url = mirror://debian/dists/wheezy/main/binary-amd64/Packages.bz2; - sha256 = "b400e459ce2f8af8621182c3a9ea843f0df3dc2d5662e6c6204f9406f5ff2d41"; - }; - urlPrefix = mirror://debian; - packages = commonDebianPackages; - }; - debian8i386 = { name = "debian-8.10-jessie-i386"; fullName = "Debian 8.10 Jessie (i386)"; packagesList = fetchurl { url = mirror://debian/dists/jessie/main/binary-i386/Packages.xz; - sha256 = "b3aa33bfe0256f72b7aad07b6c714b790d9a20d86c1a448a6f36b35652a82ff0"; + sha256 = "1w1gm195dcrndy5486kcv0h9l3br9dqnqyyhmavp4vr5w2zk7amk"; }; urlPrefix = mirror://debian; packages = commonDebianPackages; @@ -1973,11 +990,35 @@ rec { fullName = "Debian 8.10 Jessie (amd64)"; packagesList = fetchurl { url = mirror://debian/dists/jessie/main/binary-amd64/Packages.xz; - sha256 = "689e77cdf5334a3fffa5ca504e8131ee9ec88a7616f12c9ea5a3d5ac3100a710"; + sha256 = "045700qsrmd3lng2rw8nfs5ci7pf660lwl6alpzkyjikyp6pg7k8"; }; urlPrefix = mirror://debian; packages = commonDebianPackages; }; + + debian9i386 = { + name = "debian-9.3-stretch-i386"; + fullName = "Debian 9.3 Stretch (i386)"; + packagesList = fetchurl { + url = mirror://debian/dists/stretch/main/binary-i386/Packages.xz; + sha256 = "1rpv0r92pkr9dmjvpffvgmq3an1s83npfmq870h67jqag3qpwj9l"; + }; + urlPrefix = mirror://debian; + packages = commonDebianPackages; + }; + + debian9x86_64 = { + name = "debian-9.3-stretch-amd64"; + fullName = "Debian 9.3 Stretch (amd64)"; + packagesList = fetchurl { + url = mirror://debian/dists/stretch/main/binary-amd64/Packages.xz; + sha256 = "1gnkvh7wc5yp0rw8kq8p8rlskvl0lc4cv3gdylw8qpqzy75xqlig"; + }; + urlPrefix = mirror://debian; + packages = commonDebianPackages; + }; + + }; @@ -1997,7 +1038,7 @@ rec { "make" "patch" "perl" - "pkgconfig" + "pkgconf-pkg-config" "rpm" "rpm-build" "tar" @@ -2101,6 +1142,7 @@ rec { # Needed because it provides /etc/login.defs, whose absence causes # the "passwd" post-installs script to fail. "login" + "passwd" ]; commonDebianPackages = commonDebPackages ++ [ "sysvinit" "diff" "mktemp" ]; diff --git a/pkgs/data/documentation/man-pages/default.nix b/pkgs/data/documentation/man-pages/default.nix index 0e6a0450bb47..ec58dfd77492 100644 --- a/pkgs/data/documentation/man-pages/default.nix +++ b/pkgs/data/documentation/man-pages/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "man-pages-${version}"; - version = "4.14"; + version = "4.15"; src = fetchurl { url = "mirror://kernel/linux/docs/man-pages/${name}.tar.xz"; - sha256 = "0wf9ymqxk1k5xwcl3n919p66a1aayif3x4cahj4w04y3k1wbhlih"; + sha256 = "01n1rq1kvambax85xamriawbga94mh63s5mgjmjljjgf50m7yw6f"; }; makeFlags = [ "MANDIR=$(out)/share/man" ]; diff --git a/pkgs/data/fonts/fira-code/default.nix b/pkgs/data/fonts/fira-code/default.nix index 5cfd2ec1f472..191e52c427a7 100644 --- a/pkgs/data/fonts/fira-code/default.nix +++ b/pkgs/data/fonts/fira-code/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchzip }: let - version = "1.204"; + version = "1.205"; in fetchzip { name = "fira-code-${version}"; @@ -12,7 +12,7 @@ in fetchzip { unzip -j $downloadedFile \*.otf -d $out/share/fonts/opentype ''; - sha256 = "0gngbnrq42ysz13w3s227ghv1yigw399r3w2415ipb5pba8vipad"; + sha256 = "0h8b89d1n3y56k7x9zrwm9fic09ccg1mc7g1258g152m5g6z6zms"; meta = with stdenv.lib; { homepage = https://github.com/tonsky/FiraCode; diff --git a/pkgs/data/fonts/font-awesome-ttf/default.nix b/pkgs/data/fonts/font-awesome-4/default.nix similarity index 100% rename from pkgs/data/fonts/font-awesome-ttf/default.nix rename to pkgs/data/fonts/font-awesome-4/default.nix diff --git a/pkgs/data/fonts/font-awesome-5/default.nix b/pkgs/data/fonts/font-awesome-5/default.nix new file mode 100644 index 000000000000..6bb175f1ecac --- /dev/null +++ b/pkgs/data/fonts/font-awesome-5/default.nix @@ -0,0 +1,30 @@ +{ stdenv, fetchzip }: + +let + version = "5.0.6"; +in fetchzip rec { + name = "font-awesome-${version}"; + + url = "https://github.com/FortAwesome/Font-Awesome/archive/${version}.zip"; + + postFetch = '' + mkdir -p $out/share/fonts + unzip -j $downloadedFile "Font-Awesome-${version}/use-on-desktop/Font Awesome 5 Brands-Regular-400.otf" -d $out/share/fonts/opentype + unzip -j $downloadedFile "Font-Awesome-${version}/use-on-desktop/Font Awesome 5 Free-Regular-400.otf" -d $out/share/fonts/opentype + unzip -j $downloadedFile "Font-Awesome-${version}/use-on-desktop/Font Awesome 5 Free-Solid-900.otf" -d $out/share/fonts/opentype + ''; + + sha256 = "1p7xb8s371r62rx0akcnlkk4mspjid6y0s9h04gakx83ymgjlfg4"; + + meta = with stdenv.lib; { + description = "Font Awesome - OTF font"; + longDescription = '' + Font Awesome gives you scalable vector icons that can instantly be customized. + This package includes only the OTF font. For full CSS etc. see the project website. + ''; + homepage = http://fortawesome.github.io/Font-Awesome/; + license = licenses.ofl; + platforms = platforms.all; + maintainers = with maintainers; [ abaldeau ]; + }; +} diff --git a/pkgs/data/icons/arc-icon-theme/default.nix b/pkgs/data/icons/arc-icon-theme/default.nix index 91e379de223a..84bf45a52bbe 100644 --- a/pkgs/data/icons/arc-icon-theme/default.nix +++ b/pkgs/data/icons/arc-icon-theme/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, autoreconfHook, moka-icon-theme }: +{ stdenv, fetchFromGitHub, autoreconfHook, gtk3, moka-icon-theme }: stdenv.mkDerivation rec { name = "${package-name}-${version}"; @@ -12,14 +12,14 @@ stdenv.mkDerivation rec { sha256 = "1ch3hp08qri93510hypzz6m2x4xgg2h15wvnhjwh1x1s1b7jvxjd"; }; - nativeBuildInputs = [ autoreconfHook ]; + nativeBuildInputs = [ autoreconfHook gtk3 moka-icon-theme ]; - buildInputs = [ moka-icon-theme ]; + postFixup = "gtk-update-icon-cache $out/share/icons/Arc"; meta = with stdenv.lib; { description = "Arc icon theme"; homepage = https://github.com/horst3180/arc-icon-theme; - license = with licenses; [ gpl3 ]; + license = licenses.gpl3; platforms = platforms.all; maintainers = with maintainers; [ romildo ]; }; diff --git a/pkgs/data/icons/elementary-icon-theme/default.nix b/pkgs/data/icons/elementary-icon-theme/default.nix index 77d29d52507e..db4b5ea6387b 100644 --- a/pkgs/data/icons/elementary-icon-theme/default.nix +++ b/pkgs/data/icons/elementary-icon-theme/default.nix @@ -1,26 +1,19 @@ -{ stdenv, fetchurl }: +{ stdenv, fetchurl, cmake, gtk3 }: stdenv.mkDerivation rec { + name = "elementary-icon-theme-${version}"; version = "4.3.1"; - package-name = "elementary-icon-theme"; - - name = "${package-name}-${version}"; - src = fetchurl { url = "https://launchpad.net/elementaryicons/4.x/${version}/+download/${name}.tar.xz"; sha256 = "1rp22igvnx71l94j5a6px142329djhk2psm1wfgbhdxbj23hw9kb"; }; - dontBuild = true; + nativeBuildInputs = [ cmake gtk3 ]; + + postPatch = "cat > volumeicon/CMakeLists.txt"; + postFixup = "gtk-update-icon-cache $out/share/icons/elementary"; - installPhase = '' - install -dm 755 $out/share/{icons,doc/$name} - cp -dr --no-preserve='ownership' . $out/share/icons/Elementary/ - mv $out/share/icons/Elementary/{AUTHORS,CONTRIBUTORS,README.md} \ - $out/share/doc/$name/ - rm $out/share/icons/Elementary/{COPYING,pre-commit} - ''; meta = with stdenv.lib; { description = "Elementary icon theme"; diff --git a/pkgs/data/icons/elementary-xfce-icon-theme/default.nix b/pkgs/data/icons/elementary-xfce-icon-theme/default.nix index 9ff54d5d64d5..724f3a066cc8 100644 --- a/pkgs/data/icons/elementary-xfce-icon-theme/default.nix +++ b/pkgs/data/icons/elementary-xfce-icon-theme/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, gtk3, hicolor_icon_theme }: +{ stdenv, fetchFromGitHub, gtk3, hicolor-icon-theme }: stdenv.mkDerivation rec { name = "elementary-xfce-icon-theme-${version}"; @@ -11,24 +11,21 @@ stdenv.mkDerivation rec { sha256 = "15n28f2pw8b0y5pi8ydahg31v6hhh7zvpvymi8jaafdc9bn18z3y"; }; - # fallback icon theme - propagatedBuildInputs = [ hicolor_icon_theme ]; - - dontBuild = true; + nativeBuildInputs = [ gtk3 hicolor-icon-theme ]; installPhase = '' - install -dm 755 $out/share/icons - cp -dr --no-preserve='ownership' elementary-xfce{,-dark,-darker,-darkest} $out/share/icons/ + mkdir -p $out/share/icons + mv elementary-xfce* $out/share/icons ''; - postInstall = '' - for icons in "$out"/share/icons/*; do - "${gtk3.out}/bin/gtk-update-icon-cache" "$icons" + postFixup = '' + for theme in $out/share/icons/*; do + gtk-update-icon-cache $theme done ''; meta = with stdenv.lib; { - description = "Elementary icons for Xfce and other Gtk+ desktops like Gnome3"; + description = "Elementary icons for Xfce and other GTK+ desktops like GNOME"; homepage = https://github.com/shimmerproject/elementary-xfce; license = licenses.gpl2; platforms = platforms.unix; diff --git a/pkgs/data/icons/faba-icon-theme/default.nix b/pkgs/data/icons/faba-icon-theme/default.nix index 37f46060ae31..fdad4f0f46da 100644 --- a/pkgs/data/icons/faba-icon-theme/default.nix +++ b/pkgs/data/icons/faba-icon-theme/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, autoreconfHook, elementary-icon-theme }: +{ stdenv, fetchFromGitHub, autoreconfHook, elementary-icon-theme, gtk3 }: stdenv.mkDerivation rec { name = "${package-name}-${version}"; @@ -12,14 +12,14 @@ stdenv.mkDerivation rec { sha256 = "0hif030pd4w3s851k0s65w0mf2pik10ha25ycpsv91gpbgarqcns"; }; - nativeBuildInputs = [ autoreconfHook ]; - - buildInputs = [ elementary-icon-theme ]; + nativeBuildInputs = [ autoreconfHook elementary-icon-theme gtk3 ]; postPatch = '' substituteInPlace Makefile.am --replace '$(DESTDIR)'/usr $out ''; + postFixup = "gtk-update-icon-cache $out/share/icons/Faba"; + meta = with stdenv.lib; { description = "A sexy and modern icon theme with Tango influences"; homepage = https://snwh.org/moka; diff --git a/pkgs/data/icons/faba-mono-icons/default.nix b/pkgs/data/icons/faba-mono-icons/default.nix index 3a871e86d9d1..bdb6f651e6a5 100644 --- a/pkgs/data/icons/faba-mono-icons/default.nix +++ b/pkgs/data/icons/faba-mono-icons/default.nix @@ -1,25 +1,29 @@ -{ stdenv, fetchFromGitHub, autoreconfHook, moka-icon-theme }: +{ stdenv, fetchFromGitHub, autoreconfHook, gtk3, moka-icon-theme }: stdenv.mkDerivation rec { - name = "${package-name}-${version}"; - package-name = "faba-mono-icons"; + name = "${pname}-${version}"; + pname = "faba-mono-icons"; version = "2016-04-30"; src = fetchFromGitHub { owner = "snwh"; - repo = package-name; + repo = pname; rev = "2006c5281eb988c799068734f289a85443800cda"; sha256 = "0nisfl92y6hrbakp9qxi0ygayl6avkzrhwirg6854bwqjy2dvjv9"; }; - nativeBuildInputs = [ autoreconfHook ]; + nativeBuildInputs = [ autoreconfHook gtk3 moka-icon-theme ]; - buildInputs = [ moka-icon-theme ]; + postFixup = '' + for theme in $out/share/icons/*; do + gtk-update-icon-cache $theme + done + ''; meta = with stdenv.lib; { description = "The full set of Faba monochrome panel icons"; homepage = https://snwh.org/moka; - license = with licenses; [ gpl3 ]; + license = licenses.gpl3; platforms = platforms.all; maintainers = with maintainers; [ romildo ]; }; diff --git a/pkgs/data/icons/hicolor-icon-theme/default.nix b/pkgs/data/icons/hicolor-icon-theme/default.nix index e5a3faf7742b..03c5be143ded 100644 --- a/pkgs/data/icons/hicolor-icon-theme/default.nix +++ b/pkgs/data/icons/hicolor-icon-theme/default.nix @@ -1,18 +1,18 @@ { stdenv, fetchurl }: stdenv.mkDerivation rec { - name = "hicolor-icon-theme-0.15"; + name = "hicolor-icon-theme-0.17"; src = fetchurl { url = "http://icon-theme.freedesktop.org/releases/${name}.tar.xz"; - sha256 = "1k1kf2c5zbqh31nglc3nxs9j6wr083k9kjyql8p22ccc671mmi4w"; + sha256 = "1n59i3al3zx6p90ff0l43gzpzmlqnzm6hf5cryxqrlbi48sq8x1i"; }; setupHook = ./setup-hook.sh; - meta = { + meta = with stdenv.lib; { description = "Default fallback theme used by implementations of the icon theme specification"; homepage = https://icon-theme.freedesktop.org/releases/; - platforms = with stdenv.lib.platforms; linux ++ darwin; + platforms = platforms.unix; }; } diff --git a/pkgs/data/icons/maia-icon-theme/default.nix b/pkgs/data/icons/maia-icon-theme/default.nix index f4f81f8de8be..82aafca11f4f 100644 --- a/pkgs/data/icons/maia-icon-theme/default.nix +++ b/pkgs/data/icons/maia-icon-theme/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub }: +{ stdenv, fetchFromGitHub, cmake, extra-cmake-modules, gtk3, kdeFrameworks }: stdenv.mkDerivation rec { name = "maia-icon-theme-${version}"; @@ -11,21 +11,19 @@ stdenv.mkDerivation rec { sha256 = "0f9l3k9abgg8islzddrxgbxaw6vbai5bvz5qi1v2fzir7ykx7bgj"; }; - dontBuild = true; - - installPhase = '' - install -dm 755 $out/share/icons - for f in "" "-dark"; do - rm icons$f/CMakeLists.txt - cp -dr --no-preserve='ownership' icons$f $out/share/icons/maia$f - done - ''; + nativeBuildInputs = [ + cmake + extra-cmake-modules + gtk3 + kdeFrameworks.plasma-framework + kdeFrameworks.kwindowsystem + ]; meta = with stdenv.lib; { description = "Icons based on Breeze and Super Flat Remix"; homepage = https://github.com/manjaro/artwork-maia; - license = licenses.free; - maintainers = [ maintainers.mounium ]; + license = licenses.free; # https://github.com/manjaro/artwork-maia/issues/27 + maintainers = with maintainers; [ mounium ]; platforms = platforms.all; }; } diff --git a/pkgs/data/icons/moka-icon-theme/default.nix b/pkgs/data/icons/moka-icon-theme/default.nix index 5ac2a13be4d1..f3180db54dcf 100644 --- a/pkgs/data/icons/moka-icon-theme/default.nix +++ b/pkgs/data/icons/moka-icon-theme/default.nix @@ -1,25 +1,25 @@ -{ stdenv, fetchFromGitHub, autoreconfHook, faba-icon-theme }: +{ stdenv, fetchFromGitHub, autoreconfHook, faba-icon-theme, gtk3 }: stdenv.mkDerivation rec { - name = "${package-name}-${version}"; - package-name = "moka-icon-theme"; + name = "${pname}-${version}"; + pname = "moka-icon-theme"; version = "5.3.6"; src = fetchFromGitHub { owner = "snwh"; - repo = package-name; + repo = pname; rev = "v${version}"; sha256 = "17f8k8z8xvib4hkxq0cw9j7bhdpqpv5frrkyc4sbyildcbavzzbr"; }; - nativeBuildInputs = [ autoreconfHook ]; - - buildInputs = [ faba-icon-theme ]; + nativeBuildInputs = [ autoreconfHook faba-icon-theme gtk3 ]; postPatch = '' substituteInPlace Makefile.am --replace '$(DESTDIR)'/usr $out ''; + postFixup = "gtk-update-icon-cache $out/share/icons/Moka"; + meta = with stdenv.lib; { description = "An icon theme designed with a minimal flat style using simple geometry and bright colours"; homepage = https://snwh.org/moka; diff --git a/pkgs/data/icons/numix-icon-theme/default.nix b/pkgs/data/icons/numix-icon-theme/default.nix index 08fd012bb41e..6b6b77ae5e8b 100644 --- a/pkgs/data/icons/numix-icon-theme/default.nix +++ b/pkgs/data/icons/numix-icon-theme/default.nix @@ -1,26 +1,28 @@ -{ stdenv, fetchFromGitHub, hicolor_icon_theme }: +{ stdenv, fetchFromGitHub, gtk3, hicolor-icon-theme }: stdenv.mkDerivation rec { + name = "${pname}-${version}"; + pname = "numix-icon-theme"; version = "17-12-25"; - package-name = "numix-icon-theme"; - - name = "${package-name}-${version}"; - src = fetchFromGitHub { owner = "numixproject"; - repo = package-name; + repo = pname; rev = version; sha256 = "0q3hpq2jc9iwnzzqpb12g1qzjsw4ckhdqkfqf6nirl87r5drkv6j"; }; - buildInputs = [ hicolor_icon_theme ]; - - dontBuild = true; + nativeBuildInputs = [ gtk3 hicolor-icon-theme ]; installPhase = '' - install -dm 755 $out/share/icons - cp -dr --no-preserve='ownership' Numix{,-Light} $out/share/icons/ + mkdir -p $out/share/icons + mv Numix{,-Light} $out/share/icons + ''; + + postFixup = '' + for theme in $out/share/icons/*; do + gtk-update-icon-cache $theme + done ''; meta = with stdenv.lib; { diff --git a/pkgs/data/icons/paper-icon-theme/default.nix b/pkgs/data/icons/paper-icon-theme/default.nix index f161d6fbbd67..f49009e76f3e 100644 --- a/pkgs/data/icons/paper-icon-theme/default.nix +++ b/pkgs/data/icons/paper-icon-theme/default.nix @@ -1,18 +1,24 @@ -{ stdenv, fetchFromGitHub, autoreconfHook }: +{ stdenv, fetchFromGitHub, autoreconfHook, gtk3 }: stdenv.mkDerivation rec { - name = "${package-name}-${version}"; - package-name = "paper-icon-theme"; + name = "${pname}-${version}"; + pname = "paper-icon-theme"; version = "2017-11-20"; src = fetchFromGitHub { owner = "snwh"; - repo = package-name; + repo = pname; rev = "af0296ecc872ad723fad7dca6e7e89eb85cbb3a8"; sha256 = "18a9zl9lbw9gc3zas49w329xrps4slvkp4nv815nlnmimz8dj85m"; }; - nativeBuildInputs = [ autoreconfHook ]; + nativeBuildInputs = [ autoreconfHook gtk3 ]; + + postFixup = '' + for theme in $out/share/icons/*; do + gtk-update-icon-cache $theme + done + ''; meta = with stdenv.lib; { description = "Modern icon theme designed around bold colours and simple geometric shapes"; diff --git a/pkgs/data/icons/papirus-icon-theme/default.nix b/pkgs/data/icons/papirus-icon-theme/default.nix index ef817a2e3f47..ec3c671e2fd9 100644 --- a/pkgs/data/icons/papirus-icon-theme/default.nix +++ b/pkgs/data/icons/papirus-icon-theme/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub }: +{ stdenv, fetchFromGitHub, gtk3 }: stdenv.mkDerivation rec { name = "papirus-icon-theme-${version}"; @@ -7,20 +7,25 @@ stdenv.mkDerivation rec { src = fetchFromGitHub { owner = "PapirusDevelopmentTeam"; repo = "papirus-icon-theme"; - rev = "${version}"; + rev = version; sha256 = "10q7ppizzqi8c564jydqivia43gp4j1z984igfyym2mdwdw71mzq"; }; - dontBuild = true; + nativeBuildInputs = [ gtk3 ]; installPhase = '' - install -dm 755 $out/share/icons - cp -dr Papirus{,-Dark,-Light} $out/share/icons/ - cp -dr ePapirus $out/share/icons/ + mkdir -p $out/share/icons + mv {,e}Papirus* $out/share/icons + ''; + + postFixup = '' + for theme in $out/share/icons/*; do + gtk-update-icon-cache $theme + done ''; meta = with stdenv.lib; { - description = "Papirus icon theme for Linux"; + description = "Papirus icon theme"; homepage = https://github.com/PapirusDevelopmentTeam/papirus-icon-theme; license = licenses.lgpl3; platforms = platforms.all; diff --git a/pkgs/data/misc/hackage/default.nix b/pkgs/data/misc/hackage/default.nix index 7f7932d01b4f..55d975e70d27 100644 --- a/pkgs/data/misc/hackage/default.nix +++ b/pkgs/data/misc/hackage/default.nix @@ -1,6 +1,6 @@ { fetchurl }: fetchurl { - url = "https://github.com/commercialhaskell/all-cabal-hashes/archive/4c8b3501ea6fc9f41cd192ddc08e2d9583a1e679.tar.gz"; - sha256 = "0aa4pimgllqgn8bcy2p2cdwbpz6s6wk8j41w35jvzaqfj15gysnq"; + url = "https://github.com/commercialhaskell/all-cabal-hashes/archive/acac7d958b43c270c8411fc65895a531e496423f.tar.gz"; + sha256 = "15crmzdnj7lpbkhb44vhh7g0ghw0xj4cqkyqyg638dslijc5mjzd"; } diff --git a/pkgs/data/misc/media-player-info/default.nix b/pkgs/data/misc/media-player-info/default.nix index 4d824e6e8d77..dbf92ad066f5 100644 --- a/pkgs/data/misc/media-player-info/default.nix +++ b/pkgs/data/misc/media-player-info/default.nix @@ -1,15 +1,15 @@ { stdenv, fetchurl, pkgconfig, python3, udev, systemd }: let - name = "media-player-info-22"; + name = "media-player-info-23"; in stdenv.mkDerivation { inherit name; src = fetchurl { - url = "http://www.freedesktop.org/software/media-player-info/${name}.tar.gz"; - sha256 = "0di3gfx5z8c34yspzyllydr5snzg71r985kbqhrhb1il51qxgrvy"; + url = "https://www.freedesktop.org/software/media-player-info/${name}.tar.gz"; + sha256 = "1jy8xh4xjgjc4wj4qrw6sx2j3606zsj4bgiczhzf3xlpnkh6vax9"; }; buildInputs = [ udev systemd ]; @@ -25,7 +25,7 @@ in meta = with stdenv.lib; { description = "A repository of data files describing media player capabilities"; - homepage = http://www.freedesktop.org/wiki/Software/media-player-info/; + homepage = https://www.freedesktop.org/wiki/Software/media-player-info/; license = licenses.bsd3; maintainers = with maintainers; [ ttuegel ]; platforms = with platforms; linux; diff --git a/pkgs/data/misc/mime-types/default.nix b/pkgs/data/misc/mime-types/default.nix index bce1c5d81d89..65ad964736d1 100644 --- a/pkgs/data/misc/mime-types/default.nix +++ b/pkgs/data/misc/mime-types/default.nix @@ -1,21 +1,15 @@ -{ stdenv, fetchurl }: +{ stdenv, fetchzip }: -stdenv.mkDerivation rec { - name = "mime-types-${version}"; +let version = "9"; - - src = fetchurl { - url = "https://mirrors.kernel.org/gentoo/distfiles/${name}.tar.bz2"; - sha256 = "0pib8v0f5xwwm3xj2ygdi2dlxxvbq6p95l3fah5f66qj9xrqlqxl"; - }; - - dontBuild = true; - - installPhase = '' - runHook preInstall - install -Dm644 -t $out/etc mime.types - runHook postInstall +in fetchzip rec { + name = "mime-types-${version}"; + url = "https://mirrors.kernel.org/gentoo/distfiles/${name}.tar.bz2"; + postFetch = '' + mkdir -p $out/etc + tar xjvf $downloadedFile --directory=$out/etc --strip-components=1 ''; + sha256 = "0gyla4wfiaccs0qh0hw7n08kdpnkkssglcg0z2jblb2lsdr4qna0"; meta = with stdenv.lib; { description = "A database of common mappings of file extensions to MIME types"; diff --git a/pkgs/desktops/gnome-2/default.nix b/pkgs/desktops/gnome-2/default.nix index 4fec962f16d8..a91202a22123 100644 --- a/pkgs/desktops/gnome-2/default.nix +++ b/pkgs/desktops/gnome-2/default.nix @@ -3,12 +3,18 @@ let overridden = set // overrides; set = with overridden; { # Backward compatibility. - gtkdoc = self.gtk_doc; + gtkdoc = self.gtk-doc; startup_notification = libstartup_notification; startupnotification = libstartup_notification; - gnomedocutils = self.gnome_doc_utils; + gnomedocutils = self.gnome-doc-utils; gnomeicontheme = self.gnome_icon_theme; gnomepanel = self.gnome_panel; + gnome_common = gnome-common; + gnome_keyring = gnome-keyring; + gnome_desktop = gnome-desktop; + gnome_session = gnome-session; + gnome_settings_daemon = gnome-settings-daemon; + gnome_control_center = gnome-control-center; #### PLATFORM @@ -41,7 +47,7 @@ let overridden = set // overrides; set = with overridden; { libgnomecanvasmm = callPackage ./platform/libgnomecanvasmm { }; # for git-head builds - gnome_common = callPackage platform/gnome-common { }; + gnome-common = callPackage platform/gnome-common { }; gnome_mime_data = callPackage ./platform/gnome-mime-data { }; @@ -77,7 +83,7 @@ let overridden = set // overrides; set = with overridden; { #### DESKTOP - gnome_keyring = callPackage ./desktop/gnome-keyring { }; + gnome-keyring = callPackage ./desktop/gnome-keyring { }; libgweather = callPackage ./desktop/libgweather { }; @@ -97,15 +103,15 @@ let overridden = set // overrides; set = with overridden; { gnome_menus = callPackage ./desktop/gnome-menus { }; - gnome_desktop = callPackage ./desktop/gnome-desktop { }; + gnome-desktop = callPackage ./desktop/gnome-desktop { }; gnome_panel = callPackage ./desktop/gnome-panel { }; - gnome_session = callPackage ./desktop/gnome-session { }; + gnome-session = callPackage ./desktop/gnome-session { }; - gnome_settings_daemon = callPackage ./desktop/gnome-settings-daemon { }; + gnome-settings-daemon = callPackage ./desktop/gnome-settings-daemon { }; - gnome_control_center = callPackage ./desktop/gnome-control-center { }; + gnome-control-center = callPackage ./desktop/gnome-control-center { }; gtksourceview = callPackage ./desktop/gtksourceview { }; diff --git a/pkgs/desktops/gnome-2/desktop/gnome-control-center/default.nix b/pkgs/desktops/gnome-2/desktop/gnome-control-center/default.nix index c07dc9730e6d..7202be839082 100644 --- a/pkgs/desktops/gnome-2/desktop/gnome-control-center/default.nix +++ b/pkgs/desktops/gnome-2/desktop/gnome-control-center/default.nix @@ -1,7 +1,7 @@ -{ stdenv, fetchurl, pkgconfig, dbus_glib, libxml2Python, libxslt, libxklavier, cairo, popt, which, python -, shared_mime_info, desktop_file_utils, libunique, libtool, bzip2 -, glib, gtk, pango, atk, gnome_doc_utils, intltool, GConf, libglade, libgnome, libgnomeui, libgnomekbd -, librsvg, gnome_menus, gnome_desktop, gnome_panel, metacity, gnome_settings_daemon +{ stdenv, fetchurl, pkgconfig, dbus-glib, libxml2Python, libxslt, libxklavier, cairo, popt, which, python +, shared-mime-info, desktop-file-utils, libunique, libtool, bzip2 +, glib, gtk, pango, atk, gnome-doc-utils, intltool, GConf, libglade, libgnome, libgnomeui, libgnomekbd +, librsvg, gnome_menus, gnome-desktop, gnome_panel, metacity, gnome-settings-daemon , libbonobo, libbonoboui, libgnomecanvas, libart_lgpl, gnome_vfs, ORBit2 , libSM }: @@ -14,9 +14,9 @@ stdenv.mkDerivation { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ dbus_glib libxml2Python libxslt libxklavier popt which python shared_mime_info desktop_file_utils - gtk gnome_doc_utils intltool GConf libglade libgnomekbd libunique libtool bzip2 - libgnomeui librsvg gnome_menus gnome_desktop gnome_panel metacity gnome_settings_daemon + buildInputs = [ dbus-glib libxml2Python libxslt libxklavier popt which python shared-mime-info desktop-file-utils + gtk gnome-doc-utils intltool GConf libglade libgnomekbd libunique libtool bzip2 + libgnomeui librsvg gnome_menus gnome-desktop gnome_panel metacity gnome-settings-daemon libSM ]; configureFlags = "--disable-scrollkeeper"; diff --git a/pkgs/desktops/gnome-2/desktop/gnome-desktop/default.nix b/pkgs/desktops/gnome-2/desktop/gnome-desktop/default.nix index 63df026836fa..b99f23555d38 100644 --- a/pkgs/desktops/gnome-2/desktop/gnome-desktop/default.nix +++ b/pkgs/desktops/gnome-2/desktop/gnome-desktop/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, python, libxml2Python, libxslt, which, libX11, gtk -, intltool, GConf, gnome_doc_utils}: +, intltool, GConf, gnome-doc-utils}: stdenv.mkDerivation { name = "gnome-desktop-2.32.1"; @@ -12,5 +12,5 @@ stdenv.mkDerivation { configureFlags = "--disable-scrollkeeper"; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ python libxml2Python libxslt which libX11 gtk - intltool GConf gnome_doc_utils ]; + intltool GConf gnome-doc-utils ]; } diff --git a/pkgs/desktops/gnome-2/desktop/gnome-keyring/default.nix b/pkgs/desktops/gnome-2/desktop/gnome-keyring/default.nix index 50f2cd081332..26f3f624a042 100644 --- a/pkgs/desktops/gnome-2/desktop/gnome-keyring/default.nix +++ b/pkgs/desktops/gnome-2/desktop/gnome-keyring/default.nix @@ -1,5 +1,5 @@ {stdenv, fetchurl, pkgconfig, dbus, libgcrypt, libtasn1, pam, python, glib, -gtk, intltool, GConf, libgnome_keyring }: +gtk, intltool, GConf, libgnome-keyring }: stdenv.mkDerivation { name = "gnome-keyring-2.30.3"; @@ -9,7 +9,7 @@ stdenv.mkDerivation { sha256 = "02r9gv3a4a705jf3h7c0bizn33c73wz0iw2500m7z291nrnmqkmj"; }; - buildInputs = [ dbus libgcrypt pam python gtk GConf libgnome_keyring ]; + buildInputs = [ dbus libgcrypt pam python gtk GConf libgnome-keyring ]; propagatedBuildInputs = [ glib libtasn1 ]; diff --git a/pkgs/desktops/gnome-2/desktop/gnome-panel/default.nix b/pkgs/desktops/gnome-2/desktop/gnome-panel/default.nix index 514389c6faf8..d85b5494da47 100644 --- a/pkgs/desktops/gnome-2/desktop/gnome-panel/default.nix +++ b/pkgs/desktops/gnome-2/desktop/gnome-panel/default.nix @@ -1,7 +1,7 @@ -{ stdenv, fetchurl, pkgconfig, dbus_glib, dbus, cairo, popt, which, libxml2Python, libxslt, bzip2, python -, glib, gtk, pango, atk, libXau, libcanberra_gtk2 -, intltool, ORBit2, libglade, libgnome, libgnomeui, libbonobo, libbonoboui, GConf, gnome_menus, gnome_desktop -, libwnck, librsvg, libgweather, gnome_doc_utils, libgnomecanvas, libart_lgpl, libtasn1, libtool, xorg }: +{ stdenv, fetchurl, pkgconfig, dbus-glib, dbus, cairo, popt, which, libxml2Python, libxslt, bzip2, python +, glib, gtk, pango, atk, libXau, libcanberra-gtk2 +, intltool, ORBit2, libglade, libgnome, libgnomeui, libbonobo, libbonoboui, GConf, gnome_menus, gnome-desktop +, libwnck, librsvg, libgweather, gnome-doc-utils, libgnomecanvas, libart_lgpl, libtasn1, libtool, xorg }: stdenv.mkDerivation { name = "gnome-panel-2.32.1"; @@ -12,10 +12,10 @@ stdenv.mkDerivation { }; buildInputs = - [ gtk dbus_glib popt libxml2Python libxslt bzip2 python libXau intltool + [ gtk dbus-glib popt libxml2Python libxslt bzip2 python libXau intltool ORBit2 libglade libgnome libgnomeui libbonobo libbonoboui GConf - gnome_menus gnome_desktop libwnck librsvg libgweather gnome_doc_utils - libtasn1 libtool libcanberra_gtk2 xorg.libICE xorg.libSM + gnome_menus gnome-desktop libwnck librsvg libgweather gnome-doc-utils + libtasn1 libtool libcanberra-gtk2 xorg.libICE xorg.libSM ]; nativeBuildInputs = [ pkgconfig intltool which ]; diff --git a/pkgs/desktops/gnome-2/desktop/gnome-session/default.nix b/pkgs/desktops/gnome-2/desktop/gnome-session/default.nix index 7678cb3a4b42..a5ae555ded83 100644 --- a/pkgs/desktops/gnome-2/desktop/gnome-session/default.nix +++ b/pkgs/desktops/gnome-2/desktop/gnome-session/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, dbus_glib, cairo, dbus, gtk, pango, atk, libXau, libXtst, inputproto +{ stdenv, fetchurl, pkgconfig, dbus-glib, cairo, dbus, gtk, pango, atk, libXau, libXtst, inputproto , intltool, libglade, startup_notification, GConf, upower, libSM }: stdenv.mkDerivation { @@ -10,7 +10,7 @@ stdenv.mkDerivation { }; buildInputs = - [ dbus_glib gtk libXau libXtst inputproto libglade startup_notification + [ dbus-glib gtk libXau libXtst inputproto libglade startup_notification GConf upower libSM ]; nativeBuildInputs = [ pkgconfig intltool ]; diff --git a/pkgs/desktops/gnome-2/desktop/gnome-settings-daemon/default.nix b/pkgs/desktops/gnome-2/desktop/gnome-settings-daemon/default.nix index 37f995396861..9712ce64841f 100644 --- a/pkgs/desktops/gnome-2/desktop/gnome-settings-daemon/default.nix +++ b/pkgs/desktops/gnome-2/desktop/gnome-settings-daemon/default.nix @@ -1,5 +1,5 @@ -{ stdenv, fetchurl, pkgconfig, dbus_glib, libxklavier, gtk -, intltool, GConf, gnome_desktop, libglade, libgnomekbd, polkit, libpulseaudio +{ stdenv, fetchurl, pkgconfig, dbus-glib, libxklavier, gtk +, intltool, GConf, gnome-desktop, libglade, libgnomekbd, polkit, libpulseaudio , libSM }: stdenv.mkDerivation { @@ -11,7 +11,7 @@ stdenv.mkDerivation { }; buildInputs = - [ dbus_glib libxklavier gtk GConf gnome_desktop libglade libgnomekbd polkit + [ dbus-glib libxklavier gtk GConf gnome-desktop libglade libgnomekbd polkit libpulseaudio libSM ]; diff --git a/pkgs/desktops/gnome-2/desktop/gtksourceview/default.nix b/pkgs/desktops/gnome-2/desktop/gtksourceview/default.nix index bd8b71d0daca..05da06846418 100644 --- a/pkgs/desktops/gnome-2/desktop/gtksourceview/default.nix +++ b/pkgs/desktops/gnome-2/desktop/gtksourceview/default.nix @@ -1,5 +1,5 @@ {stdenv, fetchpatch, fetchurl, autoreconfHook, pkgconfig, atk, cairo, glib -, gnome_common, gtk, pango +, gnome-common, gtk, pango , libxml2Python, perl, intltool, gettext, gtk-mac-integration }: with stdenv.lib; @@ -32,7 +32,7 @@ stdenv.mkDerivation rec { pango libxml2Python perl intltool gettext ] ++ optionals stdenv.isDarwin [ - autoreconfHook gnome_common gtk-mac-integration + autoreconfHook gnome-common gtk-mac-integration ]; preConfigure = optionalString stdenv.isDarwin '' diff --git a/pkgs/desktops/gnome-2/desktop/libgnomekbd/default.nix b/pkgs/desktops/gnome-2/desktop/libgnomekbd/default.nix index f0882e39a857..b846ef888c43 100644 --- a/pkgs/desktops/gnome-2/desktop/libgnomekbd/default.nix +++ b/pkgs/desktops/gnome-2/desktop/libgnomekbd/default.nix @@ -1,4 +1,4 @@ -{stdenv, fetchurl, pkgconfig, dbus_glib, libxklavier, glib, gtk, intltool, GConf, libglade}: +{stdenv, fetchurl, pkgconfig, dbus-glib, libxklavier, glib, gtk, intltool, GConf, libglade}: stdenv.mkDerivation { name = "libgnomekbd-2.32.0"; @@ -9,5 +9,5 @@ stdenv.mkDerivation { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ dbus_glib libxklavier glib gtk intltool GConf libglade ]; + buildInputs = [ dbus-glib libxklavier glib gtk intltool GConf libglade ]; } diff --git a/pkgs/desktops/gnome-2/desktop/mail-notification/default.nix b/pkgs/desktops/gnome-2/desktop/mail-notification/default.nix index 22604f214d48..d4935c498f13 100644 --- a/pkgs/desktops/gnome-2/desktop/mail-notification/default.nix +++ b/pkgs/desktops/gnome-2/desktop/mail-notification/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, fetchFromGitHub, pkgconfig, glib, gnome2, dbus_glib, gmime, libnotify, libgnome_keyring, openssl, cyrus_sasl, gnonlin, sylpheed, gob2, gettext, intltool, libxml2, hicolor_icon_theme, tango-icon-theme }: +{ stdenv, fetchurl, fetchFromGitHub, pkgconfig, glib, gnome2, dbus-glib, gmime, libnotify, libgnome-keyring, openssl, cyrus_sasl, gnonlin, sylpheed, gob2, gettext, intltool, libxml2, hicolor-icon-theme, tango-icon-theme }: stdenv.mkDerivation rec { rev = "9ae8768"; @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ glib dbus_glib gmime libnotify libgnome_keyring openssl cyrus_sasl gnonlin sylpheed gob2 gettext intltool gnome2.GConf gnome2.libgnomeui dbus_glib gmime libnotify gnome2.gnome_keyring gnome2.scrollkeeper libxml2 gnome2.gnome_icon_theme hicolor_icon_theme tango-icon-theme ]; + buildInputs = [ glib dbus-glib gmime libnotify libgnome-keyring openssl cyrus_sasl gnonlin sylpheed gob2 gettext intltool gnome2.GConf gnome2.libgnomeui dbus-glib gmime libnotify gnome2.gnome-keyring gnome2.scrollkeeper libxml2 gnome2.gnome_icon_theme hicolor-icon-theme tango-icon-theme ]; prePatch = '' sed -i -e '/jb_rule_set_install_message/d' -e '/jb_rule_add_install_command/d' jbsrc/jb.c diff --git a/pkgs/desktops/gnome-2/desktop/metacity/default.nix b/pkgs/desktops/gnome-2/desktop/metacity/default.nix index 10c790bc09cc..95dd97568f46 100644 --- a/pkgs/desktops/gnome-2/desktop/metacity/default.nix +++ b/pkgs/desktops/gnome-2/desktop/metacity/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, pkgconfig, glib, gtk, libXcomposite, libXcursor, libXdamage -, libcanberra_gtk2, intltool, GConf, startup_notification, zenity, gnome_doc_utils -, gsettings_desktop_schemas }: +, libcanberra-gtk2, intltool, GConf, startup_notification, zenity, gnome-doc-utils +, gsettings-desktop-schemas }: stdenv.mkDerivation { name = "metacity-2.30.3"; @@ -11,8 +11,8 @@ stdenv.mkDerivation { }; buildInputs = - [ pkgconfig glib gtk libXcomposite libXcursor libXdamage libcanberra_gtk2 - intltool GConf startup_notification zenity gnome_doc_utils - gsettings_desktop_schemas + [ pkgconfig glib gtk libXcomposite libXcursor libXdamage libcanberra-gtk2 + intltool GConf startup_notification zenity gnome-doc-utils + gsettings-desktop-schemas ]; } diff --git a/pkgs/desktops/gnome-2/desktop/zenity/default.nix b/pkgs/desktops/gnome-2/desktop/zenity/default.nix index 3ab8838c97b6..55a5f9c0a234 100644 --- a/pkgs/desktops/gnome-2/desktop/zenity/default.nix +++ b/pkgs/desktops/gnome-2/desktop/zenity/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, cairo, libxml2, libxslt, glib, gtk, pango, atk -, gnome_doc_utils, intltool, libglade, libX11, which }: +, gnome-doc-utils, intltool, libglade, libX11, which }: stdenv.mkDerivation { name = "zenity-2.32.1"; @@ -12,5 +12,5 @@ stdenv.mkDerivation { configureFlags = "--disable-scrollkeeper"; buildInputs = [ gtk libglade libxml2 libxslt libX11 ]; - nativeBuildInputs = [ pkgconfig intltool gnome_doc_utils which ]; + nativeBuildInputs = [ pkgconfig intltool gnome-doc-utils which ]; } diff --git a/pkgs/desktops/gnome-2/platform/GConf/default.nix b/pkgs/desktops/gnome-2/platform/GConf/default.nix index afa27a93bad5..778a1cc920f1 100644 --- a/pkgs/desktops/gnome-2/platform/GConf/default.nix +++ b/pkgs/desktops/gnome-2/platform/GConf/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, dbus_glib, glib, ORBit2, libxml2 +{ stdenv, fetchurl, pkgconfig, dbus-glib, glib, ORBit2, libxml2 , polkit, intltool, dbus_libs, gtk2 ? null, withGtk ? false }: assert withGtk -> (gtk2 != null); @@ -13,7 +13,7 @@ stdenv.mkDerivation { outputs = [ "out" "dev" "man" ]; - buildInputs = [ ORBit2 dbus_libs dbus_glib libxml2 ] + buildInputs = [ ORBit2 dbus_libs dbus-glib libxml2 ] # polkit requires pam, which requires shadow.h, which is not available on # darwin ++ stdenv.lib.optional (!stdenv.isDarwin) polkit diff --git a/pkgs/desktops/gnome-2/platform/at-spi/default.nix b/pkgs/desktops/gnome-2/platform/at-spi/default.nix index b0b669148ff3..9bcc9ab6cabe 100644 --- a/pkgs/desktops/gnome-2/platform/at-spi/default.nix +++ b/pkgs/desktops/gnome-2/platform/at-spi/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, python, pkgconfig, popt, atk, gtk, libX11, libICE, libXtst, libXi -, intltool, libbonobo, ORBit2, GConf, dbus_glib }: +, intltool, libbonobo, ORBit2, GConf, dbus-glib }: stdenv.mkDerivation { name = "at-spi-1.32.0"; @@ -13,5 +13,5 @@ stdenv.mkDerivation { nativeBuildInputs = [ pkgconfig ]; buildInputs = [ python popt atk gtk libX11 libICE libXtst libXi - intltool libbonobo ORBit2 GConf dbus_glib ]; + intltool libbonobo ORBit2 GConf dbus-glib ]; } diff --git a/pkgs/desktops/gnome-2/platform/gnome-common/default.nix b/pkgs/desktops/gnome-2/platform/gnome-common/default.nix index c00f0a9c37b2..54a2bd526a94 100644 --- a/pkgs/desktops/gnome-2/platform/gnome-common/default.nix +++ b/pkgs/desktops/gnome-2/platform/gnome-common/default.nix @@ -9,7 +9,7 @@ stdenv.mkDerivation rec { sha256 = "1pz13mpp09q5s3bikm8ml92s1g0scihsm4iipqv1ql3mp6d4z73s"; }; - propagatedBuildInputs = [ which ]; # autogen.sh which is using gnome_common tends to require which + propagatedBuildInputs = [ which ]; # autogen.sh which is using gnome-common tends to require which patches = [(fetchurl { name = "gnome-common-patch"; diff --git a/pkgs/desktops/gnome-2/platform/gnome-vfs/default.nix b/pkgs/desktops/gnome-2/platform/gnome-vfs/default.nix index 06af8a63200a..4ca0e791a2a9 100644 --- a/pkgs/desktops/gnome-2/platform/gnome-vfs/default.nix +++ b/pkgs/desktops/gnome-2/platform/gnome-vfs/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, libxml2, bzip2, openssl, dbus_glib +{ stdenv, fetchurl, pkgconfig, libxml2, bzip2, openssl, dbus-glib , glib, fam, cdparanoia, intltool, GConf, gnome_mime_data, avahi, acl }: stdenv.mkDerivation rec { @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ intltool pkgconfig ]; buildInputs = - [ libxml2 bzip2 openssl dbus_glib fam cdparanoia + [ libxml2 bzip2 openssl dbus-glib fam cdparanoia gnome_mime_data avahi acl ]; diff --git a/pkgs/desktops/gnome-2/platform/gtkhtml/4.x.nix b/pkgs/desktops/gnome-2/platform/gtkhtml/4.x.nix index 49b8cc88f9de..493f88290f3a 100644 --- a/pkgs/desktops/gnome-2/platform/gtkhtml/4.x.nix +++ b/pkgs/desktops/gnome-2/platform/gtkhtml/4.x.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, gtk3, intltool, -GConf, enchant, isocodes, gnome_icon_theme, gsettings_desktop_schemas }: +GConf, enchant, isocodes, gnome_icon_theme, gsettings-desktop-schemas }: stdenv.mkDerivation rec { version = "4.10.0"; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { sha256 = "1hq6asgb5n9q3ryx2vngr4jyi8lg65lzpnlgrgcwayiczcj68fya"; }; - propagatedBuildInputs = [ gsettings_desktop_schemas gtk3 gnome_icon_theme GConf ]; + propagatedBuildInputs = [ gsettings-desktop-schemas gtk3 gnome_icon_theme GConf ]; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ intltool enchant isocodes ]; } diff --git a/pkgs/desktops/gnome-2/platform/libbonobo/default.nix b/pkgs/desktops/gnome-2/platform/libbonobo/default.nix index d93ef73ca986..ee0bf5f82a09 100644 --- a/pkgs/desktops/gnome-2/platform/libbonobo/default.nix +++ b/pkgs/desktops/gnome-2/platform/libbonobo/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, flex, bison, pkgconfig, glib, dbus_glib, libxml2, popt +{ stdenv, fetchurl, flex, bison, pkgconfig, glib, dbus-glib, libxml2, popt , intltool, ORBit2, procps }: stdenv.mkDerivation rec { diff --git a/pkgs/desktops/gnome-2/platform/libgnome/default.nix b/pkgs/desktops/gnome-2/platform/libgnome/default.nix index 5a488e052c19..2dcb85235ee4 100644 --- a/pkgs/desktops/gnome-2/platform/libgnome/default.nix +++ b/pkgs/desktops/gnome-2/platform/libgnome/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, glib, popt, zlib, libcanberra_gtk2 +{ stdenv, fetchurl, pkgconfig, glib, popt, zlib, libcanberra-gtk2 , intltool, libbonobo, GConf, gnome_vfs, ORBit2, libtool, libogg }: @@ -18,6 +18,6 @@ stdenv.mkDerivation rec { outputs = [ "out" "dev" ]; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ popt zlib intltool GConf gnome_vfs libcanberra_gtk2 libtool ]; + buildInputs = [ popt zlib intltool GConf gnome_vfs libcanberra-gtk2 libtool ]; propagatedBuildInputs = [ glib libbonobo libogg ]; } diff --git a/pkgs/desktops/gnome-2/platform/libgnomeui/default.nix b/pkgs/desktops/gnome-2/platform/libgnomeui/default.nix index 24cd851eef6a..838e51337453 100644 --- a/pkgs/desktops/gnome-2/platform/libgnomeui/default.nix +++ b/pkgs/desktops/gnome-2/platform/libgnomeui/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, fetchpatch, pkgconfig, libxml2, xorg, glib, pango , intltool, libgnome, libgnomecanvas, libbonoboui, GConf, libtool -, gnome_vfs, libgnome_keyring, libglade }: +, gnome_vfs, libgnome-keyring, libglade }: stdenv.mkDerivation rec { name = "libgnomeui-${minVer}.5"; @@ -23,7 +23,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig intltool ]; buildInputs = - [ xorg.xlibsWrapper libxml2 GConf pango glib libgnome_keyring libglade libtool ]; + [ xorg.xlibsWrapper libxml2 GConf pango glib libgnome-keyring libglade libtool ]; propagatedBuildInputs = [ libgnome libbonoboui libgnomecanvas gnome_vfs ]; } diff --git a/pkgs/desktops/gnome-3/apps/accerciser/default.nix b/pkgs/desktops/gnome-3/apps/accerciser/default.nix index 545e89a85125..a96d4f7a8eaf 100644 --- a/pkgs/desktops/gnome-3/apps/accerciser/default.nix +++ b/pkgs/desktops/gnome-3/apps/accerciser/default.nix @@ -1,19 +1,32 @@ { stdenv, fetchurl, pkgconfig, gnome3, gtk3, wrapGAppsHook -, itstool, libxml2, python3Packages, at_spi2_core +, itstool, libxml2, python3Packages, at-spi2-core , dbus, intltool, libwnck3 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) src name; + name = "accerciser-${version}"; + version = "3.22.0"; - nativeBuildInputs = [ pkgconfig ]; + src = fetchurl { + url = "mirror://gnome/sources/accerciser/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "883306274442c7ecc076b24afca5190c835c40871ded1b9790da69347e9ca3c5"; + }; + + nativeBuildInputs = [ pkgconfig wrapGAppsHook itstool intltool ]; buildInputs = [ - gtk3 wrapGAppsHook itstool libxml2 python3Packages.python python3Packages.pyatspi + gtk3 libxml2 python3Packages.python python3Packages.pyatspi python3Packages.pygobject3 python3Packages.ipython - at_spi2_core dbus intltool libwnck3 gnome3.defaultIconTheme + at-spi2-core dbus libwnck3 gnome3.defaultIconTheme ]; wrapPrefixVariables = [ "PYTHONPATH" ]; + passthru = { + updateScript = gnome3.updateScript { + packageName = "accerciser"; + attrPath = "gnome3.accerciser"; + }; + }; + meta = with stdenv.lib; { homepage = https://wiki.gnome.org/Apps/Accerciser; description = "Interactive Python accessibility explorer"; diff --git a/pkgs/desktops/gnome-3/apps/accerciser/src.nix b/pkgs/desktops/gnome-3/apps/accerciser/src.nix deleted file mode 100644 index 20bd00839649..000000000000 --- a/pkgs/desktops/gnome-3/apps/accerciser/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "accerciser-3.22.0"; - - src = fetchurl { - url = mirror://gnome/sources/accerciser/3.22/accerciser-3.22.0.tar.xz; - sha256 = "883306274442c7ecc076b24afca5190c835c40871ded1b9790da69347e9ca3c5"; - }; -} diff --git a/pkgs/desktops/gnome-3/apps/bijiben/default.nix b/pkgs/desktops/gnome-3/apps/bijiben/default.nix index ca266d73fd35..eaf8528b6ffb 100644 --- a/pkgs/desktops/gnome-3/apps/bijiben/default.nix +++ b/pkgs/desktops/gnome-3/apps/bijiben/default.nix @@ -1,11 +1,21 @@ { stdenv, meson, ninja, gettext, fetchurl, pkgconfig, glib -, evolution_data_server, evolution, sqlite -, wrapGAppsHook, itstool, desktop_file_utils -, clutter_gtk, libuuid, webkitgtk, zeitgeist +, evolution-data-server, evolution, sqlite +, wrapGAppsHook, itstool, desktop-file-utils +, clutter-gtk, libuuid, webkitgtk, zeitgeist , gnome3, librsvg, gdk_pixbuf, libxml2 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "bijiben-${version}"; + version = "3.27.1"; + + src = fetchurl { + url = "mirror://gnome/sources/bijiben/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "7b4623467f3cb745c4b268d6fb2d9da32cbc96ffb5b1bbf2a153b692e295ac64"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "bijiben"; attrPath = "gnome3.bijiben"; }; + }; doCheck = true; @@ -18,23 +28,22 @@ stdenv.mkDerivation rec { patchShebangs meson_post_install.py ''; - propagatedUserEnvPkgs = [ gnome3.gnome_themes_standard ]; + propagatedUserEnvPkgs = [ gnome3.gnome-themes-standard ]; nativeBuildInputs = [ - meson ninja pkgconfig gettext itstool libxml2 desktop_file_utils wrapGAppsHook + meson ninja pkgconfig gettext itstool libxml2 desktop-file-utils wrapGAppsHook ]; - buildInputs = [ glib clutter_gtk libuuid webkitgtk gnome3.tracker - gnome3.gnome_online_accounts zeitgeist - gnome3.gsettings_desktop_schemas + buildInputs = [ glib clutter-gtk libuuid webkitgtk gnome3.tracker + gnome3.gnome-online-accounts zeitgeist + gnome3.gsettings-desktop-schemas gdk_pixbuf gnome3.defaultIconTheme librsvg - evolution_data_server evolution sqlite ]; + evolution-data-server evolution sqlite ]; enableParallelBuilding = true; meta = with stdenv.lib; { homepage = https://wiki.gnome.org/Apps/Bijiben; description = "Note editor designed to remain simple to use"; - broken = true; maintainers = gnome3.maintainers; license = licenses.gpl3; platforms = platforms.linux; diff --git a/pkgs/desktops/gnome-3/apps/bijiben/src.nix b/pkgs/desktops/gnome-3/apps/bijiben/src.nix deleted file mode 100644 index ee573eaef8eb..000000000000 --- a/pkgs/desktops/gnome-3/apps/bijiben/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "bijiben-3.27.1"; - - src = fetchurl { - url = mirror://gnome/sources/bijiben/3.27/bijiben-3.27.1.tar.xz; - sha256 = "7b4623467f3cb745c4b268d6fb2d9da32cbc96ffb5b1bbf2a153b692e295ac64"; - }; -} diff --git a/pkgs/desktops/gnome-3/apps/cheese/default.nix b/pkgs/desktops/gnome-3/apps/cheese/default.nix index e94a89c7f27c..77ee086a950c 100644 --- a/pkgs/desktops/gnome-3/apps/cheese/default.nix +++ b/pkgs/desktops/gnome-3/apps/cheese/default.nix @@ -1,27 +1,37 @@ -{ stdenv, intltool, fetchurl, wrapGAppsHook, gnome-video-effects, libcanberra_gtk3 -, pkgconfig, gtk3, glib, clutter_gtk, clutter-gst, udev, gst_all_1, itstool +{ stdenv, intltool, fetchurl, wrapGAppsHook, gnome-video-effects, libcanberra-gtk3 +, pkgconfig, gtk3, glib, clutter-gtk, clutter-gst, udev, gst_all_1, itstool , libgudev, autoreconfHook, vala, docbook_xml_dtd_43, docbook_xsl, appstream-glib -, libxslt, yelp_tools, gnome_common, gtk_doc -, adwaita-icon-theme, librsvg, totem, gdk_pixbuf, gnome3, gnome_desktop, libxml2 }: +, libxslt, yelp-tools, gnome-common, gtk-doc +, adwaita-icon-theme, librsvg, totem, gdk_pixbuf, gnome3, gnome-desktop, libxml2 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "cheese-${version}"; + version = "3.26.0"; + + src = fetchurl { + url = "mirror://gnome/sources/cheese/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "8ef52fc41de1817c4e4274e23eb7c29d28b64ae0f0d1fec52e184e99aea6c605"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "cheese"; attrPath = "gnome3.cheese"; }; + }; nativeBuildInputs = [ pkgconfig intltool itstool vala wrapGAppsHook libxml2 appstream-glib libxslt docbook_xml_dtd_43 docbook_xsl - autoreconfHook gtk_doc yelp_tools gnome_common + autoreconfHook gtk-doc yelp-tools gnome-common ]; buildInputs = [ gtk3 glib gnome-video-effects gdk_pixbuf adwaita-icon-theme librsvg udev gst_all_1.gstreamer - gst_all_1.gst-plugins-base gst_all_1.gst-plugins-good gnome_desktop - gst_all_1.gst-plugins-bad clutter_gtk clutter-gst - libcanberra_gtk3 libgudev ]; + gst_all_1.gst-plugins-base gst_all_1.gst-plugins-good gnome-desktop + gst_all_1.gst-plugins-bad clutter-gtk clutter-gst + libcanberra-gtk3 libgudev ]; outputs = [ "out" "man" "devdoc" ]; patches = [ - gtk_doc.respect_xml_catalog_files_var_patch + gtk-doc.respect_xml_catalog_files_var_patch ]; preFixup = '' diff --git a/pkgs/desktops/gnome-3/apps/cheese/src.nix b/pkgs/desktops/gnome-3/apps/cheese/src.nix deleted file mode 100644 index 0237606ae35c..000000000000 --- a/pkgs/desktops/gnome-3/apps/cheese/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "cheese-3.26.0"; - - src = fetchurl { - url = mirror://gnome/sources/cheese/3.26/cheese-3.26.0.tar.xz; - sha256 = "8ef52fc41de1817c4e4274e23eb7c29d28b64ae0f0d1fec52e184e99aea6c605"; - }; -} diff --git a/pkgs/desktops/gnome-3/apps/evolution/default.nix b/pkgs/desktops/gnome-3/apps/evolution/default.nix index 4996120d4935..1119cf86a4c9 100644 --- a/pkgs/desktops/gnome-3/apps/evolution/default.nix +++ b/pkgs/desktops/gnome-3/apps/evolution/default.nix @@ -1,27 +1,37 @@ { stdenv, cmake, intltool, fetchurl, libxml2, webkitgtk, highlight , pkgconfig, gtk3, glib, libnotify, gtkspell3 -, wrapGAppsHook, itstool, shared_mime_info, libical, db, gcr, sqlite +, wrapGAppsHook, itstool, shared-mime-info, libical, db, gcr, sqlite , gnome3, librsvg, gdk_pixbuf, libsecret, nss, nspr, icu -, libcanberra_gtk3, bogofilter, gst_all_1, procps, p11_kit, openldap }: +, libcanberra-gtk3, bogofilter, gst_all_1, procps, p11-kit, openldap }: let majVer = gnome3.version; in stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "evolution-${version}"; + version = "3.26.3"; + + src = fetchurl { + url = "mirror://gnome/sources/evolution/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "091621f21827e2dfb8057f3b2c3a215c4e97a692c59d0a4ee33108af571de60e"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "evolution"; attrPath = "gnome3.evolution"; }; + }; doCheck = true; - propagatedUserEnvPkgs = [ gnome3.gnome_themes_standard - gnome3.evolution_data_server ]; + propagatedUserEnvPkgs = [ gnome3.gnome-themes-standard + gnome3.evolution-data-server ]; buildInputs = [ gtk3 glib gdk_pixbuf gnome3.defaultIconTheme librsvg db icu - gnome3.evolution_data_server libsecret libical gcr - webkitgtk shared_mime_info gnome3.gnome_desktop gtkspell3 - libcanberra_gtk3 bogofilter gnome3.libgdata sqlite - gst_all_1.gstreamer gst_all_1.gst-plugins-base p11_kit + gnome3.evolution-data-server libsecret libical gcr + webkitgtk shared-mime-info gnome3.gnome-desktop gtkspell3 + libcanberra-gtk3 bogofilter gnome3.libgdata sqlite + gst_all_1.gstreamer gst_all_1.gst-plugins-base p11-kit nss nspr libnotify procps highlight gnome3.libgweather - gnome3.gsettings_desktop_schemas - gnome3.libgnome_keyring gnome3.glib_networking openldap + gnome3.gsettings-desktop-schemas + gnome3.libgnome-keyring gnome3.glib-networking openldap ]; nativeBuildInputs = [ cmake intltool itstool libxml2 pkgconfig wrapGAppsHook ]; diff --git a/pkgs/desktops/gnome-3/apps/evolution/src.nix b/pkgs/desktops/gnome-3/apps/evolution/src.nix deleted file mode 100644 index 0c8155efde20..000000000000 --- a/pkgs/desktops/gnome-3/apps/evolution/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "evolution-3.26.3"; - - src = fetchurl { - url = mirror://gnome/sources/evolution/3.26/evolution-3.26.3.tar.xz; - sha256 = "091621f21827e2dfb8057f3b2c3a215c4e97a692c59d0a4ee33108af571de60e"; - }; -} diff --git a/pkgs/desktops/gnome-3/apps/file-roller/default.nix b/pkgs/desktops/gnome-3/apps/file-roller/default.nix index 181888293777..89f20ed6f150 100644 --- a/pkgs/desktops/gnome-3/apps/file-roller/default.nix +++ b/pkgs/desktops/gnome-3/apps/file-roller/default.nix @@ -2,7 +2,17 @@ , attr, bzip2, acl, wrapGAppsHook, librsvg, gdk_pixbuf, libnotify, nautilus }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "file-roller-${version}"; + version = "3.26.2"; + + src = fetchurl { + url = "mirror://gnome/sources/file-roller/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "3e677b8e1c2f19aead69cf4fc419a19fc3373aaf5d7bf558b4f077f10bbba8a5"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "file-roller"; attrPath = "gnome3.file-roller"; }; + }; nativeBuildInputs = [ pkgconfig wrapGAppsHook ]; diff --git a/pkgs/desktops/gnome-3/apps/file-roller/src.nix b/pkgs/desktops/gnome-3/apps/file-roller/src.nix deleted file mode 100644 index 090c88e1d3e3..000000000000 --- a/pkgs/desktops/gnome-3/apps/file-roller/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "file-roller-3.26.2"; - - src = fetchurl { - url = mirror://gnome/sources/file-roller/3.26/file-roller-3.26.2.tar.xz; - sha256 = "3e677b8e1c2f19aead69cf4fc419a19fc3373aaf5d7bf558b4f077f10bbba8a5"; - }; -} diff --git a/pkgs/desktops/gnome-3/apps/gedit/default.nix b/pkgs/desktops/gnome-3/apps/gedit/default.nix index 69056e28c260..d8f272931d9a 100644 --- a/pkgs/desktops/gnome-3/apps/gedit/default.nix +++ b/pkgs/desktops/gnome-3/apps/gedit/default.nix @@ -4,16 +4,26 @@ , gnome3, librsvg, gdk_pixbuf, file, gspell }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gedit-${version}"; + version = "3.22.1"; - propagatedUserEnvPkgs = [ gnome3.gnome_themes_standard ]; + src = fetchurl { + url = "mirror://gnome/sources/gedit/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "aa7bc3618fffa92fdb7daf2f57152e1eb7962e68561a9c92813d7bbb7fc9492b"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gedit"; attrPath = "gnome3.gedit"; }; + }; + + propagatedUserEnvPkgs = [ gnome3.gnome-themes-standard ]; nativeBuildInputs = [ pkgconfig wrapGAppsHook ]; buildInputs = [ gtk3 glib intltool itstool enchant isocodes gdk_pixbuf gnome3.defaultIconTheme librsvg libsoup gnome3.libpeas gnome3.gtksourceview libxml2 - gnome3.gsettings_desktop_schemas gnome3.dconf file gspell ]; + gnome3.gsettings-desktop-schemas gnome3.dconf file gspell ]; enableParallelBuilding = true; diff --git a/pkgs/desktops/gnome-3/apps/gedit/src.nix b/pkgs/desktops/gnome-3/apps/gedit/src.nix deleted file mode 100644 index 7a68b75eb2a7..000000000000 --- a/pkgs/desktops/gnome-3/apps/gedit/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gedit-3.22.1"; - - src = fetchurl { - url = mirror://gnome/sources/gedit/3.22/gedit-3.22.1.tar.xz; - sha256 = "aa7bc3618fffa92fdb7daf2f57152e1eb7962e68561a9c92813d7bbb7fc9492b"; - }; -} diff --git a/pkgs/desktops/gnome-3/apps/ghex/default.nix b/pkgs/desktops/gnome-3/apps/ghex/default.nix index 1179b2fdc5cf..1f8077ff4af8 100644 --- a/pkgs/desktops/gnome-3/apps/ghex/default.nix +++ b/pkgs/desktops/gnome-3/apps/ghex/default.nix @@ -2,7 +2,17 @@ wrapGAppsHook }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "ghex-${version}"; + version = "3.18.3"; + + src = fetchurl { + url = "mirror://gnome/sources/ghex/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "c67450f86f9c09c20768f1af36c11a66faf460ea00fbba628a9089a6804808d3"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "ghex"; attrPath = "gnome3.ghex"; }; + }; nativeBuildInputs = [ pkgconfig wrapGAppsHook ]; diff --git a/pkgs/desktops/gnome-3/apps/ghex/src.nix b/pkgs/desktops/gnome-3/apps/ghex/src.nix deleted file mode 100644 index edaa51d94784..000000000000 --- a/pkgs/desktops/gnome-3/apps/ghex/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "ghex-3.18.3"; - - src = fetchurl { - url = mirror://gnome/sources/ghex/3.18/ghex-3.18.3.tar.xz; - sha256 = "c67450f86f9c09c20768f1af36c11a66faf460ea00fbba628a9089a6804808d3"; - }; -} diff --git a/pkgs/desktops/gnome-3/apps/glade/default.nix b/pkgs/desktops/gnome-3/apps/glade/default.nix index 8b198b9c8797..0a6921bce6e3 100644 --- a/pkgs/desktops/gnome-3/apps/glade/default.nix +++ b/pkgs/desktops/gnome-3/apps/glade/default.nix @@ -4,14 +4,24 @@ , gnome3, gdk_pixbuf, libxslt }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "glade-${version}"; + version = "3.20.2"; + + src = fetchurl { + url = "mirror://gnome/sources/glade/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "07d1545570951aeded20e9fdc6d3d8a56aeefe2538734568c5335be336c6abed"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "glade"; attrPath = "gnome3.glade"; }; + }; nativeBuildInputs = [ pkgconfig intltool itstool wrapGAppsHook docbook_xsl libxslt gobjectIntrospection ]; buildInputs = [ gtk3 glib libxml2 python3 python3.pkgs.pygobject3 - gnome3.gsettings_desktop_schemas + gnome3.gsettings-desktop-schemas gdk_pixbuf gnome3.defaultIconTheme ]; diff --git a/pkgs/desktops/gnome-3/apps/glade/src.nix b/pkgs/desktops/gnome-3/apps/glade/src.nix deleted file mode 100644 index b244d2434c9e..000000000000 --- a/pkgs/desktops/gnome-3/apps/glade/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "glade-3.20.2"; - - src = fetchurl { - url = mirror://gnome/sources/glade/3.20/glade-3.20.2.tar.xz; - sha256 = "07d1545570951aeded20e9fdc6d3d8a56aeefe2538734568c5335be336c6abed"; - }; -} diff --git a/pkgs/desktops/gnome-3/apps/gnome-boxes/default.nix b/pkgs/desktops/gnome-3/apps/gnome-boxes/default.nix index 6126fed8e06f..674aa84dbc27 100644 --- a/pkgs/desktops/gnome-3/apps/gnome-boxes/default.nix +++ b/pkgs/desktops/gnome-3/apps/gnome-boxes/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, makeWrapper, pkgconfig, gettext, itstool, libvirt-glib -, glib, gobjectIntrospection, libxml2, gtk3, gtkvnc, libvirt, spice_gtk -, spice_protocol, libsoup, libosinfo, systemd, tracker, tracker-miners, vala -, libcap, yajl, gmp, gdbm, cyrus_sasl, gnome3, librsvg, desktop_file_utils +, glib, gobjectIntrospection, libxml2, gtk3, gtkvnc, libvirt, spice-gtk +, spice-protocol, libsoup, libosinfo, systemd, tracker, tracker-miners, vala +, libcap, yajl, gmp, gdbm, cyrus_sasl, gnome3, librsvg, desktop-file-utils , mtools, cdrkit, libcdio, libusb, libarchive, acl, libgudev, qemu, libsecret , libcap_ng, numactl, xen, libapparmor }: @@ -9,7 +9,17 @@ # TODO: ovirt (optional) stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-boxes-${version}"; + version = "3.26.2"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-boxes/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "d00fc083182963dc1bbdee5e743ceb28ba03fbf5a9ea87c78d29dca5fb5b9210"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-boxes"; attrPath = "gnome3.gnome-boxes"; }; + }; enableParallelBuilding = true; @@ -21,9 +31,9 @@ stdenv.mkDerivation rec { buildInputs = [ itstool libvirt-glib glib gobjectIntrospection libxml2 gtk3 gtkvnc - libvirt spice_gtk spice_protocol libsoup libosinfo systemd + libvirt spice-gtk spice-protocol libsoup libosinfo systemd tracker tracker-miners vala libcap yajl gmp gdbm cyrus_sasl libusb libarchive - gnome3.defaultIconTheme librsvg desktop_file_utils acl libgudev libsecret + gnome3.defaultIconTheme librsvg desktop-file-utils acl libgudev libsecret libcap_ng numactl xen libapparmor ]; @@ -31,7 +41,7 @@ stdenv.mkDerivation rec { for prog in "$out/bin/"*; do wrapProgram "$prog" \ --set GDK_PIXBUF_MODULE_FILE "$GDK_PIXBUF_MODULE_FILE" \ - --prefix XDG_DATA_DIRS : "${gnome3.gnome_themes_standard}/share:$XDG_ICON_DIRS:$GSETTINGS_SCHEMAS_PATH" \ + --prefix XDG_DATA_DIRS : "${gnome3.gnome-themes-standard}/share:$XDG_ICON_DIRS:$GSETTINGS_SCHEMAS_PATH" \ --prefix PATH : "${stdenv.lib.makeBinPath [ mtools cdrkit libcdio qemu ]}" done ''; diff --git a/pkgs/desktops/gnome-3/apps/gnome-boxes/src.nix b/pkgs/desktops/gnome-3/apps/gnome-boxes/src.nix deleted file mode 100644 index b2c2f378bff4..000000000000 --- a/pkgs/desktops/gnome-3/apps/gnome-boxes/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-boxes-3.26.2"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-boxes/3.26/gnome-boxes-3.26.2.tar.xz; - sha256 = "d00fc083182963dc1bbdee5e743ceb28ba03fbf5a9ea87c78d29dca5fb5b9210"; - }; -} diff --git a/pkgs/desktops/gnome-3/apps/gnome-calendar/default.nix b/pkgs/desktops/gnome-3/apps/gnome-calendar/default.nix index c13d7e976e5c..e82d004995da 100644 --- a/pkgs/desktops/gnome-3/apps/gnome-calendar/default.nix +++ b/pkgs/desktops/gnome-3/apps/gnome-calendar/default.nix @@ -1,16 +1,26 @@ { stdenv, fetchurl, meson, ninja, pkgconfig, wrapGAppsHook -, gettext, libxml2, gnome3, gtk, evolution_data_server, libsoup -, glib, gnome_online_accounts, gsettings_desktop_schemas }: +, gettext, libxml2, gnome3, gtk, evolution-data-server, libsoup +, glib, gnome-online-accounts, gsettings-desktop-schemas }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-calendar-${version}"; + version = "3.26.2"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-calendar/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "19a2c737b9662be926fb68e7dc731d94c523d23fa7a49e435e6a0346770dc50e"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-calendar"; attrPath = "gnome3.gnome-calendar"; }; + }; NIX_CFLAGS_COMPILE = "-I${gnome3.glib.dev}/include/gio-unix-2.0"; nativeBuildInputs = [ meson ninja pkgconfig gettext libxml2 wrapGAppsHook ]; buildInputs = [ - gtk evolution_data_server libsoup glib gnome_online_accounts - gsettings_desktop_schemas gnome3.defaultIconTheme + gtk evolution-data-server libsoup glib gnome-online-accounts + gsettings-desktop-schemas gnome3.defaultIconTheme ]; postPatch = '' diff --git a/pkgs/desktops/gnome-3/apps/gnome-calendar/src.nix b/pkgs/desktops/gnome-3/apps/gnome-calendar/src.nix deleted file mode 100644 index 39f7f333495e..000000000000 --- a/pkgs/desktops/gnome-3/apps/gnome-calendar/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-calendar-3.26.2"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-calendar/3.26/gnome-calendar-3.26.2.tar.xz; - sha256 = "19a2c737b9662be926fb68e7dc731d94c523d23fa7a49e435e6a0346770dc50e"; - }; -} diff --git a/pkgs/desktops/gnome-3/apps/gnome-characters/default.nix b/pkgs/desktops/gnome-3/apps/gnome-characters/default.nix index a354c4f6316e..5b36ea83ee13 100644 --- a/pkgs/desktops/gnome-3/apps/gnome-characters/default.nix +++ b/pkgs/desktops/gnome-3/apps/gnome-characters/default.nix @@ -2,12 +2,22 @@ , intltool, gobjectIntrospection, gjs, gdk_pixbuf, librsvg }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-characters-${version}"; + version = "3.26.2"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-characters/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "69d0218b4ce16451bef0e6ee9f9f18f5b7851aa3a758b13315d592b077374f7b"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-characters"; attrPath = "gnome3.gnome-characters"; }; + }; nativeBuildInputs = [ pkgconfig wrapGAppsHook intltool ]; buildInputs = [ gtk3 gjs gdk_pixbuf gobjectIntrospection - librsvg gnome3.gsettings_desktop_schemas gnome3.defaultIconTheme + librsvg gnome3.gsettings-desktop-schemas gnome3.defaultIconTheme ]; meta = with stdenv.lib; { diff --git a/pkgs/desktops/gnome-3/apps/gnome-characters/src.nix b/pkgs/desktops/gnome-3/apps/gnome-characters/src.nix deleted file mode 100644 index d7ac2cd8829b..000000000000 --- a/pkgs/desktops/gnome-3/apps/gnome-characters/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-characters-3.26.2"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-characters/3.26/gnome-characters-3.26.2.tar.xz; - sha256 = "69d0218b4ce16451bef0e6ee9f9f18f5b7851aa3a758b13315d592b077374f7b"; - }; -} diff --git a/pkgs/desktops/gnome-3/apps/gnome-clocks/default.nix b/pkgs/desktops/gnome-3/apps/gnome-clocks/default.nix index 5441f1e5edc9..47fd071bf839 100644 --- a/pkgs/desktops/gnome-3/apps/gnome-clocks/default.nix +++ b/pkgs/desktops/gnome-3/apps/gnome-clocks/default.nix @@ -1,19 +1,29 @@ { stdenv, fetchurl -, meson, ninja, gettext, pkgconfig, wrapGAppsHook, itstool, desktop_file_utils +, meson, ninja, gettext, pkgconfig, wrapGAppsHook, itstool, desktop-file-utils , vala, gtk3, glib, gsound , gnome3, gdk_pixbuf, geoclue2, libgweather }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-clocks-${version}"; + version = "3.26.1"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-clocks/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "2bd8d8df1d6aa0feddd4afc15d84b1308202fda59a3c3be42e3bce7e9ccd11f7"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-clocks"; attrPath = "gnome3.gnome-clocks"; }; + }; doCheck = true; nativeBuildInputs = [ - vala meson ninja pkgconfig gettext itstool wrapGAppsHook desktop_file_utils + vala meson ninja pkgconfig gettext itstool wrapGAppsHook desktop-file-utils ]; buildInputs = [ - gtk3 glib gnome3.gsettings_desktop_schemas gdk_pixbuf gnome3.defaultIconTheme - gnome3.gnome_desktop gnome3.geocode_glib geoclue2 libgweather gsound + gtk3 glib gnome3.gsettings-desktop-schemas gdk_pixbuf gnome3.defaultIconTheme + gnome3.gnome-desktop gnome3.geocode-glib geoclue2 libgweather gsound ]; prePatch = "patchShebangs build-aux/"; diff --git a/pkgs/desktops/gnome-3/apps/gnome-clocks/src.nix b/pkgs/desktops/gnome-3/apps/gnome-clocks/src.nix deleted file mode 100644 index ea7878f48695..000000000000 --- a/pkgs/desktops/gnome-3/apps/gnome-clocks/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-clocks-3.26.1"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-clocks/3.26/gnome-clocks-3.26.1.tar.xz; - sha256 = "2bd8d8df1d6aa0feddd4afc15d84b1308202fda59a3c3be42e3bce7e9ccd11f7"; - }; -} diff --git a/pkgs/desktops/gnome-3/apps/gnome-documents/default.nix b/pkgs/desktops/gnome-3/apps/gnome-documents/default.nix index a3f6084c9f39..15c597980838 100644 --- a/pkgs/desktops/gnome-3/apps/gnome-documents/default.nix +++ b/pkgs/desktops/gnome-3/apps/gnome-documents/default.nix @@ -2,23 +2,33 @@ , pkgconfig, gtk3, glib, tracker, tracker-miners , itstool, libxslt, webkitgtk , gnome3, librsvg, gdk_pixbuf, libsoup, docbook_xsl -, gobjectIntrospection, json_glib, inkscape, poppler_utils -, gmp, desktop_file_utils, wrapGAppsHook }: +, gobjectIntrospection, json-glib, inkscape, poppler_utils +, gmp, desktop-file-utils, wrapGAppsHook }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-documents-${version}"; + version = "3.26.1"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-documents/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "ba0d3084359d666b90733bb43206d24190fa85304bfe45f674ab6e6a27cb7fc9"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-documents"; attrPath = "gnome3.gnome-documents"; }; + }; doCheck = true; configureFlags = [ "--enable-getting-started" ]; - nativeBuildInputs = [ pkgconfig gettext itstool libxslt desktop_file_utils docbook_xsl wrapGAppsHook ]; + nativeBuildInputs = [ pkgconfig gettext itstool libxslt desktop-file-utils docbook_xsl wrapGAppsHook ]; buildInputs = [ gtk3 glib inkscape poppler_utils - gnome3.gsettings_desktop_schemas gmp + gnome3.gsettings-desktop-schemas gmp gdk_pixbuf gnome3.defaultIconTheme librsvg evince libsoup webkitgtk gjs gobjectIntrospection gnome3.rest - tracker tracker-miners gnome3.libgdata gnome3.gnome_online_accounts - gnome3.gnome_desktop gnome3.libzapojit json_glib gnome3.libgepub ]; + tracker tracker-miners gnome3.libgdata gnome3.gnome-online-accounts + gnome3.gnome-desktop gnome3.libzapojit json-glib gnome3.libgepub ]; enableParallelBuilding = true; diff --git a/pkgs/desktops/gnome-3/apps/gnome-documents/src.nix b/pkgs/desktops/gnome-3/apps/gnome-documents/src.nix deleted file mode 100644 index de0332ea4037..000000000000 --- a/pkgs/desktops/gnome-3/apps/gnome-documents/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-documents-3.26.1"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-documents/3.26/gnome-documents-3.26.1.tar.xz; - sha256 = "ba0d3084359d666b90733bb43206d24190fa85304bfe45f674ab6e6a27cb7fc9"; - }; -} diff --git a/pkgs/desktops/gnome-3/apps/gnome-getting-started-docs/default.nix b/pkgs/desktops/gnome-3/apps/gnome-getting-started-docs/default.nix index 0c75ebd7c783..8531fc1c7c04 100644 --- a/pkgs/desktops/gnome-3/apps/gnome-getting-started-docs/default.nix +++ b/pkgs/desktops/gnome-3/apps/gnome-getting-started-docs/default.nix @@ -1,7 +1,17 @@ { stdenv, fetchurl, gnome3, intltool, itstool, libxml2 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-getting-started-docs-${version}"; + version = "3.26.2"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-getting-started-docs/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "34f45f6b5759a46547e834f1b706ae7485fd94e1af5354154420d8910ec67775"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-getting-started-docs"; attrPath = "gnome3.gnome-getting-started-docs"; }; + }; buildInputs = [ intltool itstool libxml2 ]; diff --git a/pkgs/desktops/gnome-3/apps/gnome-getting-started-docs/src.nix b/pkgs/desktops/gnome-3/apps/gnome-getting-started-docs/src.nix deleted file mode 100644 index 3f1341b7cab8..000000000000 --- a/pkgs/desktops/gnome-3/apps/gnome-getting-started-docs/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-getting-started-docs-3.26.2"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-getting-started-docs/3.26/gnome-getting-started-docs-3.26.2.tar.xz; - sha256 = "34f45f6b5759a46547e834f1b706ae7485fd94e1af5354154420d8910ec67775"; - }; -} diff --git a/pkgs/desktops/gnome-3/apps/gnome-logs/default.nix b/pkgs/desktops/gnome-3/apps/gnome-logs/default.nix index 91d5f7d00e49..66596d916a93 100644 --- a/pkgs/desktops/gnome-3/apps/gnome-logs/default.nix +++ b/pkgs/desktops/gnome-3/apps/gnome-logs/default.nix @@ -2,14 +2,24 @@ , intltool, itstool, libxml2, systemd }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-logs-${version}"; + version = "3.26.2"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-logs/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "e17ca011e7bea756bd841e027e56cfe8c214bed4817cb35732ace4aa73ff8f5c"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-logs"; attrPath = "gnome3.gnome-logs"; }; + }; configureFlags = [ "--disable-tests" ]; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ gtk3 wrapGAppsHook intltool itstool libxml2 - systemd gnome3.gsettings_desktop_schemas gnome3.defaultIconTheme + systemd gnome3.gsettings-desktop-schemas gnome3.defaultIconTheme ]; meta = with stdenv.lib; { diff --git a/pkgs/desktops/gnome-3/apps/gnome-logs/src.nix b/pkgs/desktops/gnome-3/apps/gnome-logs/src.nix deleted file mode 100644 index 951620986685..000000000000 --- a/pkgs/desktops/gnome-3/apps/gnome-logs/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-logs-3.26.2"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-logs/3.26/gnome-logs-3.26.2.tar.xz; - sha256 = "e17ca011e7bea756bd841e027e56cfe8c214bed4817cb35732ace4aa73ff8f5c"; - }; -} diff --git a/pkgs/desktops/gnome-3/apps/gnome-maps/default.nix b/pkgs/desktops/gnome-3/apps/gnome-maps/default.nix index bb8375d595ef..c03397a40d89 100644 --- a/pkgs/desktops/gnome-3/apps/gnome-maps/default.nix +++ b/pkgs/desktops/gnome-3/apps/gnome-maps/default.nix @@ -4,17 +4,27 @@ , webkitgtk }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-maps-${version}"; + version = "3.26.2"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-maps/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "031d5c4a1aa79f1fbaf87f01fb790f7aab1d8dcd5d061cb5daf0fa96eaa18050"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-maps"; attrPath = "gnome3.gnome-maps"; }; + }; doCheck = true; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ intltool gobjectIntrospection wrapGAppsHook gtk3 geoclue2 gnome3.gjs gnome3.libgee folks gfbgraph - gnome3.geocode_glib libchamplain file libsoup + gnome3.geocode-glib libchamplain file libsoup gdk_pixbuf librsvg libgweather autoreconfHook - gnome3.gsettings_desktop_schemas gnome3.evolution_data_server - gnome3.gnome_online_accounts gnome3.defaultIconTheme + gnome3.gsettings-desktop-schemas gnome3.evolution-data-server + gnome3.gnome-online-accounts gnome3.defaultIconTheme webkitgtk ]; # The .service file isn't wrapped with the correct environment diff --git a/pkgs/desktops/gnome-3/apps/gnome-maps/src.nix b/pkgs/desktops/gnome-3/apps/gnome-maps/src.nix deleted file mode 100644 index 0fac7f865ca6..000000000000 --- a/pkgs/desktops/gnome-3/apps/gnome-maps/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-maps-3.26.2"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-maps/3.26/gnome-maps-3.26.2.tar.xz; - sha256 = "031d5c4a1aa79f1fbaf87f01fb790f7aab1d8dcd5d061cb5daf0fa96eaa18050"; - }; -} diff --git a/pkgs/desktops/gnome-3/apps/gnome-music/default.nix b/pkgs/desktops/gnome-3/apps/gnome-music/default.nix index f5454c1c3869..86ea9b6590e1 100644 --- a/pkgs/desktops/gnome-3/apps/gnome-music/default.nix +++ b/pkgs/desktops/gnome-3/apps/gnome-music/default.nix @@ -4,9 +4,19 @@ , makeWrapper, itstool, gnome3, librsvg, gst_all_1 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-music-${version}"; + version = "3.26.1"; - propagatedUserEnvPkgs = [ gnome3.gnome_themes_standard ]; + src = fetchurl { + url = "mirror://gnome/sources/gnome-music/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "7197dff12f441a52b4011512bfe8ec926f2ce4ca511f79b078e0e612d612f8c3"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-music"; attrPath = "gnome3.gnome-music"; }; + }; + + propagatedUserEnvPkgs = [ gnome3.gnome-themes-standard ]; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ gtk3 glib intltool itstool gnome3.libmediaart @@ -15,7 +25,7 @@ stdenv.mkDerivation rec { python3Packages.pycairo python3Packages.dbus-python python3Packages.requests python3Packages.pygobject3 gst_all_1.gstreamer gst_all_1.gst-plugins-base gst_all_1.gst-plugins-good gst_all_1.gst-plugins-bad wrapGAppsHook - gnome3.gsettings_desktop_schemas makeWrapper tracker tracker-miners ]; + gnome3.gsettings-desktop-schemas makeWrapper tracker tracker-miners ]; wrapPrefixVariables = [ "PYTHONPATH" ]; diff --git a/pkgs/desktops/gnome-3/apps/gnome-music/src.nix b/pkgs/desktops/gnome-3/apps/gnome-music/src.nix deleted file mode 100644 index 3ac99e146d46..000000000000 --- a/pkgs/desktops/gnome-3/apps/gnome-music/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-music-3.26.1"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-music/3.26/gnome-music-3.26.1.tar.xz; - sha256 = "7197dff12f441a52b4011512bfe8ec926f2ce4ca511f79b078e0e612d612f8c3"; - }; -} diff --git a/pkgs/desktops/gnome-3/apps/gnome-photos/default.nix b/pkgs/desktops/gnome-3/apps/gnome-photos/default.nix index 0b19ba9f0f6d..2837e1d093f5 100644 --- a/pkgs/desktops/gnome-3/apps/gnome-photos/default.nix +++ b/pkgs/desktops/gnome-3/apps/gnome-photos/default.nix @@ -1,12 +1,22 @@ { stdenv, intltool, fetchurl, exempi, libxml2 , pkgconfig, gtk3, glib, tracker, tracker-miners , makeWrapper, itstool, gegl, babl, lcms2 -, desktop_file_utils, gmp, libmediaart, wrapGAppsHook -, gnome3, librsvg, gdk_pixbuf, libexif, gexiv2, geocode_glib +, desktop-file-utils, gmp, libmediaart, wrapGAppsHook +, gnome3, librsvg, gdk_pixbuf, libexif, gexiv2, geocode-glib , dleyna-renderer }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-photos-${version}"; + version = "3.26.3"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-photos/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "028de4c8662b7d1dc3ca6c3fbe3ce7f6bb90dd097708e99f235a409756dbadab"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-photos"; attrPath = "gnome3.gnome-photos"; }; + }; # doCheck = true; @@ -14,12 +24,12 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig ]; buildInputs = [ gtk3 glib intltool itstool gegl babl gnome3.libgdata - gnome3.gsettings_desktop_schemas makeWrapper gmp libmediaart + gnome3.gsettings-desktop-schemas makeWrapper gmp libmediaart gdk_pixbuf gnome3.defaultIconTheme librsvg exempi gnome3.gfbgraph gnome3.grilo-plugins gnome3.grilo - gnome3.gnome_online_accounts gnome3.gnome_desktop - lcms2 libexif tracker tracker-miners libxml2 desktop_file_utils - wrapGAppsHook gexiv2 geocode_glib dleyna-renderer ]; + gnome3.gnome-online-accounts gnome3.gnome-desktop + lcms2 libexif tracker tracker-miners libxml2 desktop-file-utils + wrapGAppsHook gexiv2 geocode-glib dleyna-renderer ]; enableParallelBuilding = true; diff --git a/pkgs/desktops/gnome-3/apps/gnome-photos/src.nix b/pkgs/desktops/gnome-3/apps/gnome-photos/src.nix deleted file mode 100644 index b9bba1ab6a47..000000000000 --- a/pkgs/desktops/gnome-3/apps/gnome-photos/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-photos-3.26.3"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-photos/3.26/gnome-photos-3.26.3.tar.xz; - sha256 = "028de4c8662b7d1dc3ca6c3fbe3ce7f6bb90dd097708e99f235a409756dbadab"; - }; -} diff --git a/pkgs/desktops/gnome-3/apps/gnome-power-manager/default.nix b/pkgs/desktops/gnome-3/apps/gnome-power-manager/default.nix index 2fd0dfa5ac91..a295ef456df4 100644 --- a/pkgs/desktops/gnome-3/apps/gnome-power-manager/default.nix +++ b/pkgs/desktops/gnome-3/apps/gnome-power-manager/default.nix @@ -7,14 +7,24 @@ , meson , ninja , upower -, desktop_file_utils +, desktop-file-utils , wrapGAppsHook , gnome3 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-power-manager-${version}"; + version = "3.26.0"; - propagatedUserEnvPkgs = [ gnome3.gnome_themes_standard ]; + src = fetchurl { + url = "mirror://gnome/sources/gnome-power-manager/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "20aee0b0b4015e7cc6fbabc3cbc4344c07c230fe3d195e90c8ae0dc5d55a2d4e"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-power-manager"; attrPath = "gnome3.gnome-power-manager"; }; + }; + + propagatedUserEnvPkgs = [ gnome3.gnome-themes-standard ]; nativeBuildInputs = [ meson @@ -25,7 +35,7 @@ stdenv.mkDerivation rec { # needed by meson_post_install.sh glib.dev - desktop_file_utils + desktop-file-utils ]; buildInputs = [ diff --git a/pkgs/desktops/gnome-3/apps/gnome-power-manager/src.nix b/pkgs/desktops/gnome-3/apps/gnome-power-manager/src.nix deleted file mode 100644 index bdffa453504f..000000000000 --- a/pkgs/desktops/gnome-3/apps/gnome-power-manager/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-power-manager-3.26.0"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-power-manager/3.26/gnome-power-manager-3.26.0.tar.xz; - sha256 = "20aee0b0b4015e7cc6fbabc3cbc4344c07c230fe3d195e90c8ae0dc5d55a2d4e"; - }; -} diff --git a/pkgs/desktops/gnome-3/apps/gnome-weather/default.nix b/pkgs/desktops/gnome-3/apps/gnome-weather/default.nix index d6804e09a482..9e43a3c52b45 100644 --- a/pkgs/desktops/gnome-3/apps/gnome-weather/default.nix +++ b/pkgs/desktops/gnome-3/apps/gnome-weather/default.nix @@ -2,12 +2,22 @@ , libgweather, intltool, itstool, geoclue2 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-weather-${version}"; + version = "3.26.0"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-weather/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "965cc0d1b4d4e53c06d494db96f0b124d232af5c0e731ca900edd10f77a74c78"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-weather"; attrPath = "gnome3.gnome-weather"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ gtk3 wrapGAppsHook gjs intltool itstool - libgweather gnome3.defaultIconTheme geoclue2 gnome3.gsettings_desktop_schemas + libgweather gnome3.defaultIconTheme geoclue2 gnome3.gsettings-desktop-schemas ]; # The .service file isn't wrapped with the correct environment diff --git a/pkgs/desktops/gnome-3/apps/gnome-weather/src.nix b/pkgs/desktops/gnome-3/apps/gnome-weather/src.nix deleted file mode 100644 index d12db5132536..000000000000 --- a/pkgs/desktops/gnome-3/apps/gnome-weather/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-weather-3.26.0"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-weather/3.26/gnome-weather-3.26.0.tar.xz; - sha256 = "965cc0d1b4d4e53c06d494db96f0b124d232af5c0e731ca900edd10f77a74c78"; - }; -} diff --git a/pkgs/desktops/gnome-3/apps/polari/default.nix b/pkgs/desktops/gnome-3/apps/polari/default.nix index dc75193e771c..f1d6dba21b08 100644 --- a/pkgs/desktops/gnome-3/apps/polari/default.nix +++ b/pkgs/desktops/gnome-3/apps/polari/default.nix @@ -1,17 +1,27 @@ { stdenv, itstool, fetchurl, fetchpatch, gdk_pixbuf, adwaita-icon-theme -, telepathy_glib, gjs, meson, ninja, gettext, telepathy_idle, libxml2, desktop_file_utils +, telepathy-glib, gjs, meson, ninja, gettext, telepathy-idle, libxml2, desktop-file-utils , pkgconfig, gtk3, glib, libsecret, libsoup, gobjectIntrospection, appstream-glib -, gnome3, wrapGAppsHook, telepathy_logger, gspell }: +, gnome3, wrapGAppsHook, telepathy-logger, gspell }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "polari-${version}"; + version = "3.26.2"; - propagatedUserEnvPkgs = [ telepathy_idle telepathy_logger ]; + src = fetchurl { + url = "mirror://gnome/sources/polari/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "2f36361dacf5d924d134f231fdb36ec4539f7495fce325d9b2f2728bd17cc190"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "polari"; attrPath = "gnome3.polari"; }; + }; + + propagatedUserEnvPkgs = [ telepathy-idle telepathy-logger ]; nativeBuildInputs = [ meson ninja pkgconfig itstool gettext wrapGAppsHook libxml2 - desktop_file_utils gobjectIntrospection appstream-glib ]; - buildInputs = [ gtk3 glib adwaita-icon-theme gnome3.gsettings_desktop_schemas - telepathy_glib telepathy_logger gjs gspell gdk_pixbuf libsecret libsoup ]; + desktop-file-utils gobjectIntrospection appstream-glib ]; + buildInputs = [ gtk3 glib adwaita-icon-theme gnome3.gsettings-desktop-schemas + telepathy-glib telepathy-logger gjs gspell gdk_pixbuf libsecret libsoup ]; patches = [ (fetchpatch { diff --git a/pkgs/desktops/gnome-3/apps/polari/src.nix b/pkgs/desktops/gnome-3/apps/polari/src.nix deleted file mode 100644 index 8af7c33846db..000000000000 --- a/pkgs/desktops/gnome-3/apps/polari/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "polari-3.26.2"; - - src = fetchurl { - url = mirror://gnome/sources/polari/3.26/polari-3.26.2.tar.xz; - sha256 = "2f36361dacf5d924d134f231fdb36ec4539f7495fce325d9b2f2728bd17cc190"; - }; -} diff --git a/pkgs/desktops/gnome-3/apps/seahorse/default.nix b/pkgs/desktops/gnome-3/apps/seahorse/default.nix index 3bc69f67a4f8..1a8c2f55b1b0 100644 --- a/pkgs/desktops/gnome-3/apps/seahorse/default.nix +++ b/pkgs/desktops/gnome-3/apps/seahorse/default.nix @@ -2,27 +2,37 @@ , pkgconfig, gtk3, glib , wrapGAppsHook, itstool, gnupg, libsoup , gnome3, librsvg, gdk_pixbuf, gpgme -, libsecret, avahi, p11_kit, openssh }: +, libsecret, avahi, p11-kit, openssh }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "seahorse-${version}"; + version = "3.20.0"; + + src = fetchurl { + url = "mirror://gnome/sources/seahorse/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "e2b07461ed54a8333e5628e9b8e517ec2b731068377bf376570aad998274c6df"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "seahorse"; attrPath = "gnome3.seahorse"; }; + }; doCheck = true; - propagatedUserEnvPkgs = [ gnome3.gnome_themes_standard ]; + propagatedUserEnvPkgs = [ gnome3.gnome-themes-standard ]; NIX_CFLAGS_COMPILE = "-I${gnome3.glib.dev}/include/gio-unix-2.0"; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ gtk3 glib intltool itstool gnome3.gcr - gnome3.gsettings_desktop_schemas wrapGAppsHook gnupg + gnome3.gsettings-desktop-schemas wrapGAppsHook gnupg gdk_pixbuf gnome3.defaultIconTheme librsvg gpgme - libsecret avahi libsoup p11_kit vala + libsecret avahi libsoup p11-kit vala openssh ]; preFixup = '' gappsWrapperArgs+=( - --prefix XDG_DATA_DIRS : "${gnome3.gnome_themes_standard}/share" + --prefix XDG_DATA_DIRS : "${gnome3.gnome-themes-standard}/share" ) ''; diff --git a/pkgs/desktops/gnome-3/apps/seahorse/src.nix b/pkgs/desktops/gnome-3/apps/seahorse/src.nix deleted file mode 100644 index 0ae195a0a7ba..000000000000 --- a/pkgs/desktops/gnome-3/apps/seahorse/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "seahorse-3.20.0"; - - src = fetchurl { - url = mirror://gnome/sources/seahorse/3.20/seahorse-3.20.0.tar.xz; - sha256 = "e2b07461ed54a8333e5628e9b8e517ec2b731068377bf376570aad998274c6df"; - }; -} diff --git a/pkgs/desktops/gnome-3/apps/vinagre/default.nix b/pkgs/desktops/gnome-3/apps/vinagre/default.nix index e719fbf9f219..4f358cf0b4f6 100644 --- a/pkgs/desktops/gnome-3/apps/vinagre/default.nix +++ b/pkgs/desktops/gnome-3/apps/vinagre/default.nix @@ -2,7 +2,17 @@ , libsecret, itstool, makeWrapper, librsvg }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "vinagre-${version}"; + version = "3.22.0"; + + src = fetchurl { + url = "mirror://gnome/sources/vinagre/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "cd1cdbacca25c8d1debf847455155ee798c3e67a20903df8b228d4ece5505e82"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "vinagre"; attrPath = "gnome3.vinagre"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ gtk3 vte libxml2 gtkvnc intltool libsecret diff --git a/pkgs/desktops/gnome-3/apps/vinagre/src.nix b/pkgs/desktops/gnome-3/apps/vinagre/src.nix deleted file mode 100644 index 3d1357c49898..000000000000 --- a/pkgs/desktops/gnome-3/apps/vinagre/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "vinagre-3.22.0"; - - src = fetchurl { - url = mirror://gnome/sources/vinagre/3.22/vinagre-3.22.0.tar.xz; - sha256 = "cd1cdbacca25c8d1debf847455155ee798c3e67a20903df8b228d4ece5505e82"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/adwaita-icon-theme/default.nix b/pkgs/desktops/gnome-3/core/adwaita-icon-theme/default.nix index 62cc4da6ba14..2178004a43ac 100644 --- a/pkgs/desktops/gnome-3/core/adwaita-icon-theme/default.nix +++ b/pkgs/desktops/gnome-3/core/adwaita-icon-theme/default.nix @@ -1,11 +1,21 @@ { stdenv, fetchurl, pkgconfig, intltool, gnome3 -, iconnamingutils, gtk, gdk_pixbuf, librsvg, hicolor_icon_theme }: +, iconnamingutils, gtk, gdk_pixbuf, librsvg, hicolor-icon-theme }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "adwaita-icon-theme-${version}"; + version = "3.26.1"; + + src = fetchurl { + url = "mirror://gnome/sources/adwaita-icon-theme/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "28ba7392c7761996efd780779167ea6c940eedfb1bf37cfe9bccb7021f54d79d"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "adwaita-icon-theme"; attrPath = "gnome3.adwaita-icon-theme"; }; + }; # For convenience, we can specify adwaita-icon-theme only in packages - propagatedBuildInputs = [ hicolor_icon_theme ]; + propagatedBuildInputs = [ hicolor-icon-theme ]; buildInputs = [ gdk_pixbuf librsvg ]; diff --git a/pkgs/desktops/gnome-3/core/adwaita-icon-theme/src.nix b/pkgs/desktops/gnome-3/core/adwaita-icon-theme/src.nix deleted file mode 100644 index 24f0955659ec..000000000000 --- a/pkgs/desktops/gnome-3/core/adwaita-icon-theme/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "adwaita-icon-theme-3.26.1"; - - src = fetchurl { - url = mirror://gnome/sources/adwaita-icon-theme/3.26/adwaita-icon-theme-3.26.1.tar.xz; - sha256 = "28ba7392c7761996efd780779167ea6c940eedfb1bf37cfe9bccb7021f54d79d"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/baobab/default.nix b/pkgs/desktops/gnome-3/core/baobab/default.nix index f94cb3c57c46..1ff67e35f0fd 100644 --- a/pkgs/desktops/gnome-3/core/baobab/default.nix +++ b/pkgs/desktops/gnome-3/core/baobab/default.nix @@ -4,7 +4,17 @@ , gnome3, librsvg, gdk_pixbuf, file }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "baobab-${version}"; + version = "3.26.1"; + + src = fetchurl { + url = "mirror://gnome/sources/baobab/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "7a59ab5945f5d90725231b10d85a1893403f56660b1627c111d2b4eeb1ef787e"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "baobab"; }; + }; doCheck = true; diff --git a/pkgs/desktops/gnome-3/core/baobab/src.nix b/pkgs/desktops/gnome-3/core/baobab/src.nix deleted file mode 100644 index d3e2f03feb8b..000000000000 --- a/pkgs/desktops/gnome-3/core/baobab/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "baobab-3.26.1"; - - src = fetchurl { - url = mirror://gnome/sources/baobab/3.26/baobab-3.26.1.tar.xz; - sha256 = "7a59ab5945f5d90725231b10d85a1893403f56660b1627c111d2b4eeb1ef787e"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/caribou/default.nix b/pkgs/desktops/gnome-3/core/caribou/default.nix index e463fe0e03f0..9b083ff5644b 100644 --- a/pkgs/desktops/gnome-3/core/caribou/default.nix +++ b/pkgs/desktops/gnome-3/core/caribou/default.nix @@ -1,5 +1,5 @@ { fetchurl, stdenv, pkgconfig, gnome3, clutter, dbus, python3Packages, libxml2 -, libxklavier, libXtst, gtk2, intltool, libxslt, at_spi2_core, autoreconfHook +, libxklavier, libXtst, gtk2, intltool, libxslt, at-spi2-core, autoreconfHook , wrapGAppsHook }: let @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig intltool libxslt libxml2 autoreconfHook wrapGAppsHook ]; buildInputs = with gnome3; - [ glib gtk clutter at_spi2_core dbus pythonEnv python3Packages.pygobject3 + [ glib gtk clutter at-spi2-core dbus pythonEnv python3Packages.pygobject3 libXtst gtk2 ]; propagatedBuildInputs = [ gnome3.libgee libxklavier ]; diff --git a/pkgs/desktops/gnome-3/core/dconf-editor/default.nix b/pkgs/desktops/gnome-3/core/dconf-editor/default.nix index bf39965bf779..47ddf6b64861 100644 --- a/pkgs/desktops/gnome-3/core/dconf-editor/default.nix +++ b/pkgs/desktops/gnome-3/core/dconf-editor/default.nix @@ -1,12 +1,22 @@ -{ stdenv, fetchurl, vala, libxslt, pkgconfig, glib, dbus_glib, gnome3 +{ stdenv, fetchurl, vala, libxslt, pkgconfig, glib, dbus-glib, gnome3 , libxml2, intltool, docbook_xsl_ns, docbook_xsl, wrapGAppsHook }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "dconf-editor-${version}"; + version = "3.26.2"; + + src = fetchurl { + url = "mirror://gnome/sources/dconf-editor/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "28b453fe49c49d7dfaf07c85c01d7495913f93ab64a0b223c117eb17d1cb8ad1"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "dconf-editor"; attrPath = "gnome3.dconf-editor"; }; + }; nativeBuildInputs = [ pkgconfig wrapGAppsHook ]; - buildInputs = [ vala libxslt glib dbus_glib gnome3.gtk libxml2 gnome3.defaultIconTheme + buildInputs = [ vala libxslt glib dbus-glib gnome3.gtk libxml2 gnome3.defaultIconTheme intltool docbook_xsl docbook_xsl_ns gnome3.dconf ]; meta = with stdenv.lib; { diff --git a/pkgs/desktops/gnome-3/core/dconf-editor/src.nix b/pkgs/desktops/gnome-3/core/dconf-editor/src.nix deleted file mode 100644 index b21630641d94..000000000000 --- a/pkgs/desktops/gnome-3/core/dconf-editor/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "dconf-editor-3.26.2"; - - src = fetchurl { - url = mirror://gnome/sources/dconf-editor/3.26/dconf-editor-3.26.2.tar.xz; - sha256 = "28b453fe49c49d7dfaf07c85c01d7495913f93ab64a0b223c117eb17d1cb8ad1"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/dconf/default.nix b/pkgs/desktops/gnome-3/core/dconf/default.nix index 9a836869ec6e..c09a31c82264 100644 --- a/pkgs/desktops/gnome-3/core/dconf/default.nix +++ b/pkgs/desktops/gnome-3/core/dconf/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, vala, libxslt, pkgconfig, glib, dbus_glib, gnome3 +{ stdenv, fetchurl, vala, libxslt, pkgconfig, glib, dbus-glib, gnome3 , libxml2, intltool, docbook_xsl_ns, docbook_xsl, makeWrapper }: let @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { outputs = [ "out" "lib" "dev" ]; nativeBuildInputs = [ vala pkgconfig intltool libxslt libxml2 docbook_xsl docbook_xsl_ns makeWrapper ]; - buildInputs = [ glib dbus_glib ]; + buildInputs = [ glib dbus-glib ]; postConfigure = stdenv.lib.optionalString stdenv.isDarwin '' substituteInPlace client/Makefile \ diff --git a/pkgs/desktops/gnome-3/core/empathy/default.nix b/pkgs/desktops/gnome-3/core/empathy/default.nix index f9156053819a..bf83c7aa8a15 100644 --- a/pkgs/desktops/gnome-3/core/empathy/default.nix +++ b/pkgs/desktops/gnome-3/core/empathy/default.nix @@ -1,40 +1,50 @@ { stdenv, intltool, fetchurl, webkitgtk, pkgconfig, gtk3, glib , file, librsvg, gnome3, gdk_pixbuf -, dbus_glib, dbus_libs, telepathy_glib, telepathy_farstream -, clutter_gtk, clutter-gst, gst_all_1, cogl, gnome_online_accounts -, gcr, libsecret, folks, libpulseaudio, telepathy_mission_control -, telepathy_logger, libnotify, clutter, libsoup, gnutls -, evolution_data_server, yelp_xsl -, libcanberra_gtk3, p11_kit, farstream, libtool, shared_mime_info +, dbus-glib, dbus_libs, telepathy-glib, telepathy-farstream +, clutter-gtk, clutter-gst, gst_all_1, cogl, gnome-online-accounts +, gcr, libsecret, folks, libpulseaudio, telepathy-mission-control +, telepathy-logger, libnotify, clutter, libsoup, gnutls +, evolution-data-server, yelp-xsl +, libcanberra-gtk3, p11-kit, farstream, libtool, shared-mime-info , bash, wrapGAppsHook, itstool, libxml2, libxslt, icu, libgee -, isocodes, enchant, libchamplain, geoclue2, geocode_glib, cheese, libgudev }: +, isocodes, enchant, libchamplain, geoclue2, geocode-glib, cheese, libgudev }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "empathy-${version}"; + version = "3.12.14"; + + src = fetchurl { + url = "mirror://gnome/sources/empathy/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "7d86942ce97edd10ade0e6ae6a210d35e4d627fe4d223377d71fd1840bc6e3a3"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "empathy"; }; + }; propagatedUserEnvPkgs = [ - gnome_online_accounts shared_mime_info + gnome-online-accounts shared-mime-info ]; propagatedBuildInputs = [ - folks telepathy_logger evolution_data_server telepathy_mission_control + folks telepathy-logger evolution-data-server telepathy-mission-control ]; nativeBuildInputs = [ pkgconfig libtool intltool itstool file wrapGAppsHook - libxml2 libxslt yelp_xsl + libxml2 libxslt yelp-xsl ]; buildInputs = [ - gtk3 glib webkitgtk icu gnome_online_accounts - telepathy_glib clutter_gtk clutter-gst cogl + gtk3 glib webkitgtk icu gnome-online-accounts + telepathy-glib clutter-gtk clutter-gst cogl gst_all_1.gstreamer gst_all_1.gst-plugins-base gcr libsecret libpulseaudio gdk_pixbuf - libnotify clutter libsoup gnutls libgee p11_kit - libcanberra_gtk3 telepathy_farstream farstream - gnome3.defaultIconTheme gnome3.gsettings_desktop_schemas + libnotify clutter libsoup gnutls libgee p11-kit + libcanberra-gtk3 telepathy-farstream farstream + gnome3.defaultIconTheme gnome3.gsettings-desktop-schemas librsvg # Spell-checking enchant isocodes # Display maps, location awareness, geocode support - libchamplain geoclue2 geocode_glib + libchamplain geoclue2 geocode-glib # Cheese webcam support, camera monitoring cheese libgudev ]; diff --git a/pkgs/desktops/gnome-3/core/empathy/src.nix b/pkgs/desktops/gnome-3/core/empathy/src.nix deleted file mode 100644 index 7e54ed38fd36..000000000000 --- a/pkgs/desktops/gnome-3/core/empathy/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "empathy-3.12.14"; - - src = fetchurl { - url = mirror://gnome/sources/empathy/3.12/empathy-3.12.14.tar.xz; - sha256 = "7d86942ce97edd10ade0e6ae6a210d35e4d627fe4d223377d71fd1840bc6e3a3"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/eog/default.nix b/pkgs/desktops/gnome-3/core/eog/default.nix index ae0abfd71502..1acd6eb69425 100644 --- a/pkgs/desktops/gnome-3/core/eog/default.nix +++ b/pkgs/desktops/gnome-3/core/eog/default.nix @@ -1,15 +1,25 @@ { fetchurl, stdenv, gettext, pkgconfig, itstool, libxml2, libjpeg, gnome3 -, shared_mime_info, wrapGAppsHook, librsvg, libexif, gobjectIntrospection }: +, shared-mime-info, wrapGAppsHook, librsvg, libexif, gobjectIntrospection }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "eog-${version}"; + version = "3.26.2"; + + src = fetchurl { + url = "mirror://gnome/sources/eog/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "b53e3d4dfa7d0085b829a5fb95f148a099803c00ef276be7685efd5ec38807ad"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "eog"; attrPath = "gnome3.eog"; }; + }; nativeBuildInputs = [ pkgconfig gettext itstool wrapGAppsHook gobjectIntrospection ]; buildInputs = with gnome3; [ libxml2 libjpeg gtk glib libpeas librsvg - gsettings_desktop_schemas shared_mime_info adwaita-icon-theme - gnome_desktop libexif dconf ]; + gsettings-desktop-schemas shared-mime-info adwaita-icon-theme + gnome-desktop libexif dconf ]; meta = with stdenv.lib; { homepage = https://wiki.gnome.org/Apps/EyeOfGnome; diff --git a/pkgs/desktops/gnome-3/core/eog/src.nix b/pkgs/desktops/gnome-3/core/eog/src.nix deleted file mode 100644 index d0046d899bec..000000000000 --- a/pkgs/desktops/gnome-3/core/eog/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "eog-3.26.2"; - - src = fetchurl { - url = mirror://gnome/sources/eog/3.26/eog-3.26.2.tar.xz; - sha256 = "b53e3d4dfa7d0085b829a5fb95f148a099803c00ef276be7685efd5ec38807ad"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/epiphany/default.nix b/pkgs/desktops/gnome-3/core/epiphany/default.nix index 6dafa160b1f8..18a27af7977e 100644 --- a/pkgs/desktops/gnome-3/core/epiphany/default.nix +++ b/pkgs/desktops/gnome-3/core/epiphany/default.nix @@ -1,25 +1,35 @@ { stdenv, meson, ninja, gettext, fetchurl, pkgconfig, gtk, glib, icu , wrapGAppsHook, gnome3, libxml2, libxslt, itstool -, webkitgtk, libsoup, glib_networking, libsecret, gnome_desktop, libnotify, p11_kit -, sqlite, gcr, isocodes, desktop_file_utils, file -, gdk_pixbuf, gnome_common, gst_all_1, json_glib }: +, webkitgtk, libsoup, glib-networking, libsecret, gnome-desktop, libnotify, p11-kit +, sqlite, gcr, isocodes, desktop-file-utils, file +, gdk_pixbuf, gnome-common, gst_all_1, json-glib }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "epiphany-${version}"; + version = "3.26.4"; + + src = fetchurl { + url = "mirror://gnome/sources/epiphany/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "390d50f975f8ab9228016eb60bf4b8ea9a39be0b31467e2d6c27ae75fa1e84ea"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "epiphany"; }; + }; # Tests need an X display mesonFlags = [ "-Dunit_tests=false" ]; - propagatedUserEnvPkgs = [ gnome3.gnome_themes_standard ]; + propagatedUserEnvPkgs = [ gnome3.gnome-themes-standard ]; - nativeBuildInputs = [ meson ninja libxslt pkgconfig itstool gettext file wrapGAppsHook desktop_file_utils ]; + nativeBuildInputs = [ meson ninja libxslt pkgconfig itstool gettext file wrapGAppsHook desktop-file-utils ]; - buildInputs = [ gtk glib webkitgtk libsoup libxml2 libsecret gnome_desktop libnotify - sqlite isocodes p11_kit icu gnome3.yelp_tools - gdk_pixbuf gnome3.defaultIconTheme gnome_common gcr - glib_networking gst_all_1.gstreamer gst_all_1.gst-plugins-base + buildInputs = [ gtk glib webkitgtk libsoup libxml2 libsecret gnome-desktop libnotify + sqlite isocodes p11-kit icu gnome3.yelp-tools + gdk_pixbuf gnome3.defaultIconTheme gnome-common gcr + glib-networking gst_all_1.gstreamer gst_all_1.gst-plugins-base gst_all_1.gst-plugins-good gst_all_1.gst-plugins-bad gst_all_1.gst-plugins-ugly - gst_all_1.gst-libav json_glib ]; + gst_all_1.gst-libav json-glib ]; enableParallelBuilding = true; diff --git a/pkgs/desktops/gnome-3/core/epiphany/src.nix b/pkgs/desktops/gnome-3/core/epiphany/src.nix deleted file mode 100644 index 3365261b7bcf..000000000000 --- a/pkgs/desktops/gnome-3/core/epiphany/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "epiphany-3.26.4"; - - src = fetchurl { - url = mirror://gnome/sources/epiphany/3.26/epiphany-3.26.4.tar.xz; - sha256 = "390d50f975f8ab9228016eb60bf4b8ea9a39be0b31467e2d6c27ae75fa1e84ea"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/evince/default.nix b/pkgs/desktops/gnome-3/core/evince/default.nix index fab46b35af66..2d52e22c54cd 100644 --- a/pkgs/desktops/gnome-3/core/evince/default.nix +++ b/pkgs/desktops/gnome-3/core/evince/default.nix @@ -1,22 +1,32 @@ { fetchurl, stdenv, pkgconfig, intltool, libxml2 -, glib, gtk3, pango, atk, gdk_pixbuf, shared_mime_info, itstool, gnome3 +, glib, gtk3, pango, atk, gdk_pixbuf, shared-mime-info, itstool, gnome3 , poppler, ghostscriptX, djvulibre, libspectre, libsecret, wrapGAppsHook -, librsvg, gobjectIntrospection, yelp_tools +, librsvg, gobjectIntrospection, yelp-tools , recentListSize ? null # 5 is not enough, allow passing a different number , supportXPS ? false # Open XML Paper Specification via libgxps , autoreconfHook }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "evince-${version}"; + version = "3.26.0"; + + src = fetchurl { + url = "mirror://gnome/sources/evince/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "79567bdb743cf0c3ed7b638da32afc9b850298f9b4edd532455df4a7e2a4c9d8"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "evince"; }; + }; nativeBuildInputs = [ - pkgconfig gobjectIntrospection intltool itstool wrapGAppsHook yelp_tools autoreconfHook + pkgconfig gobjectIntrospection intltool itstool wrapGAppsHook yelp-tools autoreconfHook ]; buildInputs = [ glib gtk3 pango atk gdk_pixbuf libxml2 - gnome3.libgnome_keyring gnome3.gsettings_desktop_schemas + gnome3.libgnome-keyring gnome3.gsettings-desktop-schemas poppler ghostscriptX djvulibre libspectre libsecret librsvg gnome3.adwaita-icon-theme ] ++ stdenv.lib.optional supportXPS gnome3.libgxps; @@ -35,7 +45,7 @@ stdenv.mkDerivation rec { ''; preFixup = '' - gappsWrapperArgs+=(--prefix XDG_DATA_DIRS : "${shared_mime_info}/share") + gappsWrapperArgs+=(--prefix XDG_DATA_DIRS : "${shared-mime-info}/share") ''; enableParallelBuilding = true; diff --git a/pkgs/desktops/gnome-3/core/evince/src.nix b/pkgs/desktops/gnome-3/core/evince/src.nix deleted file mode 100644 index 6627be550884..000000000000 --- a/pkgs/desktops/gnome-3/core/evince/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "evince-3.26.0"; - - src = fetchurl { - url = mirror://gnome/sources/evince/3.26/evince-3.26.0.tar.xz; - sha256 = "79567bdb743cf0c3ed7b638da32afc9b850298f9b4edd532455df4a7e2a4c9d8"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/evolution-data-server/default.nix b/pkgs/desktops/gnome-3/core/evolution-data-server/default.nix index f6ee457dc63f..f5723f673bb2 100644 --- a/pkgs/desktops/gnome-3/core/evolution-data-server/default.nix +++ b/pkgs/desktops/gnome-3/core/evolution-data-server/default.nix @@ -1,17 +1,27 @@ { fetchurl, stdenv, pkgconfig, gnome3, python3, dconf , intltool, libsoup, libxml2, libsecret, icu, sqlite -, p11_kit, db, nspr, nss, libical, gperf, makeWrapper, valaSupport ? true -, vala, cmake, kerberos, openldap, webkitgtk, libaccounts-glib, json_glib }: +, p11-kit, db, nspr, nss, libical, gperf, makeWrapper, valaSupport ? true +, vala, cmake, kerberos, openldap, webkitgtk, libaccounts-glib, json-glib }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "evolution-data-server-${version}"; + version = "3.26.3"; + + src = fetchurl { + url = "mirror://gnome/sources/evolution-data-server/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "63b1ae5f76be818862f455bf841b5ebb1ec3e1f4df6d3a16dc2be348b7e0a1c5"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "evolution-data-server"; }; + }; nativeBuildInputs = [ cmake pkgconfig intltool python3 gperf makeWrapper ] ++ stdenv.lib.optional valaSupport vala; buildInputs = with gnome3; [ - glib libsoup libxml2 gtk gnome_online_accounts - gcr p11_kit libgweather libgdata libaccounts-glib json_glib + glib libsoup libxml2 gtk gnome-online-accounts + gcr p11-kit libgweather libgdata libaccounts-glib json-glib icu sqlite kerberos openldap webkitgtk ]; diff --git a/pkgs/desktops/gnome-3/core/evolution-data-server/src.nix b/pkgs/desktops/gnome-3/core/evolution-data-server/src.nix deleted file mode 100644 index 906df1b2160a..000000000000 --- a/pkgs/desktops/gnome-3/core/evolution-data-server/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "evolution-data-server-3.26.3"; - - src = fetchurl { - url = mirror://gnome/sources/evolution-data-server/3.26/evolution-data-server-3.26.3.tar.xz; - sha256 = "63b1ae5f76be818862f455bf841b5ebb1ec3e1f4df6d3a16dc2be348b7e0a1c5"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/folks/default.nix b/pkgs/desktops/gnome-3/core/folks/default.nix index 6be27021023a..776f76642222 100644 --- a/pkgs/desktops/gnome-3/core/folks/default.nix +++ b/pkgs/desktops/gnome-3/core/folks/default.nix @@ -1,35 +1,42 @@ { fetchurl, stdenv, pkgconfig, glib, gnome3, nspr, intltool -, vala, sqlite, libxml2, dbus_glib, libsoup, nss, dbus_libs -, telepathy_glib, evolution_data_server, libsecret, db }: +, vala, sqlite, libxml2, dbus-glib, libsoup, nss, dbus_libs +, telepathy-glib, evolution-data-server, libsecret, db }: # TODO: enable more folks backends let - majorVersion = "0.11"; -in -stdenv.mkDerivation rec { - name = "folks-${majorVersion}.4"; + version = "0.11.4"; +in stdenv.mkDerivation rec { + name = "folks-${version}"; src = fetchurl { - url = "mirror://gnome/sources/folks/${majorVersion}/${name}.tar.xz"; + url = "mirror://gnome/sources/folks/${gnome3.versionBranch version}/${name}.tar.xz"; sha256 = "16hqh2gxlbx0b0hgq216hndr1m72vj54jvryzii9zqkk0g9kxc57"; }; propagatedBuildInputs = [ glib gnome3.libgee sqlite ]; # dbus_daemon needed for tests - buildInputs = [ dbus_glib telepathy_glib evolution_data_server dbus_libs + buildInputs = [ dbus-glib telepathy-glib evolution-data-server dbus_libs vala libsecret libxml2 libsoup nspr nss intltool db ]; nativeBuildInputs = [ pkgconfig ]; configureFlags = "--disable-fatal-warnings"; NIX_CFLAGS_COMPILE = ["-I${nss.dev}/include/nss" - "-I${dbus_glib.dev}/include/dbus-1.0" "-I${dbus_libs.dev}/include/dbus-1.0"]; + "-I${dbus-glib.dev}/include/dbus-1.0" "-I${dbus_libs.dev}/include/dbus-1.0"]; enableParallelBuilding = true; postBuild = "rm -rf $out/share/gtk-doc"; + passthru = { + updateScript = gnome3.updateScript { + packageName = "folks"; + attrPath = "gnome3.folks"; + versionPolicy = "none"; + }; + }; + meta = { description = "Folks"; diff --git a/pkgs/desktops/gnome-3/core/gconf/default.nix b/pkgs/desktops/gnome-3/core/gconf/default.nix index 99883c8a3f67..3e7ba45b03ae 100644 --- a/pkgs/desktops/gnome-3/core/gconf/default.nix +++ b/pkgs/desktops/gnome-3/core/gconf/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, dbus_glib, gnome3 ? null, glib, libxml2 +{ stdenv, fetchurl, pkgconfig, dbus-glib, gnome3 ? null, glib, libxml2 , intltool, polkit, orbit, python, withGtk ? false }: assert withGtk -> (gnome3 != null); @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { }; buildInputs = [ libxml2 polkit orbit python ] ++ stdenv.lib.optional withGtk gnome3.gtk; - propagatedBuildInputs = [ glib dbus_glib ]; + propagatedBuildInputs = [ glib dbus-glib ]; nativeBuildInputs = [ pkgconfig intltool ]; # ToDo: ldap reported as not found but afterwards reported as supported diff --git a/pkgs/desktops/gnome-3/core/gcr/default.nix b/pkgs/desktops/gnome-3/core/gcr/default.nix index 2569b4e2c7ad..aa26c660768b 100644 --- a/pkgs/desktops/gnome-3/core/gcr/default.nix +++ b/pkgs/desktops/gnome-3/core/gcr/default.nix @@ -1,9 +1,19 @@ -{ stdenv, fetchurl, pkgconfig, intltool, gnupg, p11_kit, glib -, libgcrypt, libtasn1, dbus_glib, gtk, pango, gdk_pixbuf, atk +{ stdenv, fetchurl, pkgconfig, intltool, gnupg, p11-kit, glib +, libgcrypt, libtasn1, dbus-glib, gtk, pango, gdk_pixbuf, atk , gobjectIntrospection, makeWrapper, libxslt, vala, gnome3 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gcr-${version}"; + version = "3.20.0"; + + src = fetchurl { + url = "mirror://gnome/sources/gcr/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "90572c626d8a708225560c42b4421f7941315247fa1679d4ef569bde7f4bb379"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gcr"; attrPath = "gnome3.gcr"; }; + }; outputs = [ "out" "dev" ]; @@ -12,10 +22,10 @@ stdenv.mkDerivation rec { buildInputs = let gpg = gnupg.override { guiSupport = false; }; # prevent build cycle with pinentry_gnome in [ - gpg libgcrypt libtasn1 dbus_glib pango gdk_pixbuf atk + gpg libgcrypt libtasn1 dbus-glib pango gdk_pixbuf atk ]; - propagatedBuildInputs = [ glib gtk p11_kit ]; + propagatedBuildInputs = [ glib gtk p11-kit ]; #doCheck = true; diff --git a/pkgs/desktops/gnome-3/core/gcr/src.nix b/pkgs/desktops/gnome-3/core/gcr/src.nix deleted file mode 100644 index d166f033266c..000000000000 --- a/pkgs/desktops/gnome-3/core/gcr/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gcr-3.20.0"; - - src = fetchurl { - url = mirror://gnome/sources/gcr/3.20/gcr-3.20.0.tar.xz; - sha256 = "90572c626d8a708225560c42b4421f7941315247fa1679d4ef569bde7f4bb379"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gdm/default.nix b/pkgs/desktops/gnome-3/core/gdm/default.nix index 796e103fdb3c..ef9439a30291 100644 --- a/pkgs/desktops/gnome-3/core/gdm/default.nix +++ b/pkgs/desktops/gnome-3/core/gdm/default.nix @@ -1,10 +1,20 @@ { stdenv, fetchurl, pkgconfig, glib, itstool, libxml2, xorg, dbus , intltool, accountsservice, libX11, gnome3, systemd, autoreconfHook -, gtk, libcanberra_gtk3, pam, libtool, gobjectIntrospection, plymouth +, gtk, libcanberra-gtk3, pam, libtool, gobjectIntrospection, plymouth , librsvg, coreutils }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gdm-${version}"; + version = "3.26.2.1"; + + src = fetchurl { + url = "mirror://gnome/sources/gdm/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "17ddcb00602c2b426de58bb4b0d99af9de27450a8557dcc5ec850c080d55ad57"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gdm"; attrPath = "gnome3.gdm"; }; + }; # Only needed to make it build preConfigure = '' @@ -25,7 +35,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig libxml2 itstool intltool autoreconfHook libtool gnome3.dconf ]; buildInputs = [ glib accountsservice systemd gobjectIntrospection libX11 gtk - libcanberra_gtk3 pam plymouth librsvg ]; + libcanberra-gtk3 pam plymouth librsvg ]; enableParallelBuilding = true; diff --git a/pkgs/desktops/gnome-3/core/gdm/src.nix b/pkgs/desktops/gnome-3/core/gdm/src.nix deleted file mode 100644 index 8d92167a0391..000000000000 --- a/pkgs/desktops/gnome-3/core/gdm/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gdm-3.26.2.1"; - - src = fetchurl { - url = mirror://gnome/sources/gdm/3.26/gdm-3.26.2.1.tar.xz; - sha256 = "17ddcb00602c2b426de58bb4b0d99af9de27450a8557dcc5ec850c080d55ad57"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/geocode-glib/default.nix b/pkgs/desktops/gnome-3/core/geocode-glib/default.nix index 4d75bdc49963..e97e557e87a0 100644 --- a/pkgs/desktops/gnome-3/core/geocode-glib/default.nix +++ b/pkgs/desktops/gnome-3/core/geocode-glib/default.nix @@ -1,10 +1,20 @@ -{ fetchurl, stdenv, pkgconfig, gnome3, intltool, libsoup, json_glib }: +{ fetchurl, stdenv, pkgconfig, gnome3, intltool, libsoup, json-glib }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "geocode-glib-${version}"; + version = "3.24.0"; + + src = fetchurl { + url = "mirror://gnome/sources/geocode-glib/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "19c1fef4fd89eb4bfe6decca45ac45a2eca9bb7933be560ce6c172194840c35e"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "geocode-glib"; attrPath = "gnome3.geocode-glib"; }; + }; buildInputs = with gnome3; - [ intltool pkgconfig glib libsoup json_glib ]; + [ intltool pkgconfig glib libsoup json-glib ]; meta = with stdenv.lib; { platforms = platforms.linux; diff --git a/pkgs/desktops/gnome-3/core/geocode-glib/src.nix b/pkgs/desktops/gnome-3/core/geocode-glib/src.nix deleted file mode 100644 index 394e3a68c35c..000000000000 --- a/pkgs/desktops/gnome-3/core/geocode-glib/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "geocode-glib-3.24.0"; - - src = fetchurl { - url = mirror://gnome/sources/geocode-glib/3.24/geocode-glib-3.24.0.tar.xz; - sha256 = "19c1fef4fd89eb4bfe6decca45ac45a2eca9bb7933be560ce6c172194840c35e"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gjs/default.nix b/pkgs/desktops/gnome-3/core/gjs/default.nix index e2ae74931030..6e9f6c464df1 100644 --- a/pkgs/desktops/gnome-3/core/gjs/default.nix +++ b/pkgs/desktops/gnome-3/core/gjs/default.nix @@ -3,7 +3,17 @@ , makeWrapper }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gjs-${version}"; + version = "1.50.4"; + + src = fetchurl { + url = "mirror://gnome/sources/gjs/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "b336e8709347e3c94245f6cbc3465f9a49f3ae491a25f49f8a97268f5235b93a"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gjs"; attrPath = "gnome3.gjs"; }; + }; outputs = [ "out" "installedTests" ]; diff --git a/pkgs/desktops/gnome-3/core/gjs/src.nix b/pkgs/desktops/gnome-3/core/gjs/src.nix deleted file mode 100644 index d42b2e845585..000000000000 --- a/pkgs/desktops/gnome-3/core/gjs/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gjs-1.50.4"; - - src = fetchurl { - url = mirror://gnome/sources/gjs/1.50/gjs-1.50.4.tar.xz; - sha256 = "b336e8709347e3c94245f6cbc3465f9a49f3ae491a25f49f8a97268f5235b93a"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gnome-backgrounds/default.nix b/pkgs/desktops/gnome-3/core/gnome-backgrounds/default.nix index eb801caf5657..0aea3c4eac48 100644 --- a/pkgs/desktops/gnome-3/core/gnome-backgrounds/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-backgrounds/default.nix @@ -1,7 +1,17 @@ { stdenv, fetchurl, pkgconfig, gnome3, intltool }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-backgrounds-${version}"; + version = "3.26.2"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-backgrounds/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "3a8ba8d3463d70bce2377b168218e32367c0020f2d0caf611e7e39066081f94f"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-backgrounds"; attrPath = "gnome3.gnome-backgrounds"; }; + }; nativeBuildInputs = [ pkgconfig intltool ]; diff --git a/pkgs/desktops/gnome-3/core/gnome-backgrounds/src.nix b/pkgs/desktops/gnome-3/core/gnome-backgrounds/src.nix deleted file mode 100644 index 9d86b7168ad0..000000000000 --- a/pkgs/desktops/gnome-3/core/gnome-backgrounds/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-backgrounds-3.26.2"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-backgrounds/3.26/gnome-backgrounds-3.26.2.tar.xz; - sha256 = "3a8ba8d3463d70bce2377b168218e32367c0020f2d0caf611e7e39066081f94f"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gnome-bluetooth/default.nix b/pkgs/desktops/gnome-3/core/gnome-bluetooth/default.nix index 3dbb4e32654f..11816f68ff48 100644 --- a/pkgs/desktops/gnome-3/core/gnome-bluetooth/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-bluetooth/default.nix @@ -1,12 +1,22 @@ { stdenv, fetchurl, gnome3, meson, ninja, pkgconfig, gtk3, intltool, glib -, udev, itstool, libxml2, wrapGAppsHook, libnotify, libcanberra_gtk3, gobjectIntrospection }: +, udev, itstool, libxml2, wrapGAppsHook, libnotify, libcanberra-gtk3, gobjectIntrospection }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-bluetooth-${version}"; + version = "3.26.1"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-bluetooth/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "1d2c7b94fc76a833dad0d4d91344e9a5a7b4aad740c5a90944bd25c5be7e784f"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-bluetooth"; attrPath = "gnome3.gnome-bluetooth"; }; + }; nativeBuildInputs = [ meson ninja intltool itstool pkgconfig libxml2 wrapGAppsHook gobjectIntrospection ]; - buildInputs = [ glib gtk3 udev libnotify libcanberra_gtk3 - gnome3.defaultIconTheme gnome3.gsettings_desktop_schemas ]; + buildInputs = [ glib gtk3 udev libnotify libcanberra-gtk3 + gnome3.defaultIconTheme gnome3.gsettings-desktop-schemas ]; postPatch = '' chmod +x meson_post_install.py # patchShebangs requires executable file diff --git a/pkgs/desktops/gnome-3/core/gnome-bluetooth/src.nix b/pkgs/desktops/gnome-3/core/gnome-bluetooth/src.nix deleted file mode 100644 index 31aab6649d75..000000000000 --- a/pkgs/desktops/gnome-3/core/gnome-bluetooth/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-bluetooth-3.26.1"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-bluetooth/3.26/gnome-bluetooth-3.26.1.tar.xz; - sha256 = "1d2c7b94fc76a833dad0d4d91344e9a5a7b4aad740c5a90944bd25c5be7e784f"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gnome-calculator/default.nix b/pkgs/desktops/gnome-3/core/gnome-calculator/default.nix index 12b8af206ea0..8376bea1a038 100644 --- a/pkgs/desktops/gnome-3/core/gnome-calculator/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-calculator/default.nix @@ -3,18 +3,28 @@ , itstool, gnome3, librsvg, gdk_pixbuf, mpfr, gmp, libsoup, libmpc }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-calculator-${version}"; + version = "3.26.0"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-calculator/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "62215b37fcd73a6bbb106ebd0f25051c81ff0cf6ad84fd4a3ea176bceb5863c7"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-calculator"; attrPath = "gnome3.gnome-calculator"; }; + }; NIX_CFLAGS_COMPILE = "-I${gnome3.glib.dev}/include/gio-unix-2.0"; - propagatedUserEnvPkgs = [ gnome3.gnome_themes_standard ]; + propagatedUserEnvPkgs = [ gnome3.gnome-themes-standard ]; nativeBuildInputs = [ pkgconfig wrapGAppsHook ]; buildInputs = [ bash gtk3 glib intltool itstool libxml2 gnome3.gtksourceview mpfr gmp gdk_pixbuf gnome3.defaultIconTheme librsvg - gnome3.gsettings_desktop_schemas gnome3.dconf libsoup libmpc ]; + gnome3.gsettings-desktop-schemas gnome3.dconf libsoup libmpc ]; meta = with stdenv.lib; { homepage = https://wiki.gnome.org/action/show/Apps/Calculator; diff --git a/pkgs/desktops/gnome-3/core/gnome-calculator/src.nix b/pkgs/desktops/gnome-3/core/gnome-calculator/src.nix deleted file mode 100644 index 517220c94572..000000000000 --- a/pkgs/desktops/gnome-3/core/gnome-calculator/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-calculator-3.26.0"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-calculator/3.26/gnome-calculator-3.26.0.tar.xz; - sha256 = "62215b37fcd73a6bbb106ebd0f25051c81ff0cf6ad84fd4a3ea176bceb5863c7"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gnome-common/default.nix b/pkgs/desktops/gnome-3/core/gnome-common/default.nix index f9261e183ef1..23fd157a528a 100644 --- a/pkgs/desktops/gnome-3/core/gnome-common/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-common/default.nix @@ -1,7 +1,17 @@ { stdenv, fetchurl, which, gnome3, autoconf, automake }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-common-${version}"; + version = "3.18.0"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-common/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "22569e370ae755e04527b76328befc4c73b62bfd4a572499fde116b8318af8cf"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-common"; attrPath = "gnome3.gnome-common"; }; + }; patches = [(fetchurl { name = "gnome-common-patch"; @@ -9,7 +19,7 @@ stdenv.mkDerivation rec { sha256 = "17abp7czfzirjm7qsn2czd03hdv9kbyhk3lkjxg2xsf5fky7z7jl"; })]; - propagatedBuildInputs = [ which autoconf automake ]; # autogen.sh which is using gnome_common tends to require which + propagatedBuildInputs = [ which autoconf automake ]; # autogen.sh which is using gnome-common tends to require which meta = with stdenv.lib; { maintainers = gnome3.maintainers; diff --git a/pkgs/desktops/gnome-3/core/gnome-common/src.nix b/pkgs/desktops/gnome-3/core/gnome-common/src.nix deleted file mode 100644 index 8ffe7e20e1a9..000000000000 --- a/pkgs/desktops/gnome-3/core/gnome-common/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-common-3.18.0"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-common/3.18/gnome-common-3.18.0.tar.xz; - sha256 = "22569e370ae755e04527b76328befc4c73b62bfd4a572499fde116b8318af8cf"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gnome-contacts/default.nix b/pkgs/desktops/gnome-3/core/gnome-contacts/default.nix index 9078b9e051cd..eb2f7631ba8c 100644 --- a/pkgs/desktops/gnome-3/core/gnome-contacts/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-contacts/default.nix @@ -1,16 +1,26 @@ -{ stdenv, intltool, fetchurl, evolution_data_server, db +{ stdenv, intltool, fetchurl, evolution-data-server, db , pkgconfig, gtk3, glib, libsecret -, libchamplain, clutter_gtk, geocode_glib +, libchamplain, clutter-gtk, geocode-glib , bash, wrapGAppsHook, itstool, folks, libnotify, libxml2 -, gnome3, librsvg, gdk_pixbuf, file, telepathy_glib, nspr, nss -, libsoup, vala, dbus_glib, automake, autoconf }: +, gnome3, librsvg, gdk_pixbuf, file, telepathy-glib, nspr, nss +, libsoup, vala, dbus-glib, automake, autoconf }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-contacts-${version}"; + version = "3.26"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-contacts/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "f819ac74b2ad581f9741614627f49ef519713324afd9e4fc0ea5ac261a5f68c1"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-contacts"; attrPath = "gnome3.gnome-contacts"; }; + }; doCheck = true; - propagatedUserEnvPkgs = [ gnome3.gnome_themes_standard evolution_data_server ]; + propagatedUserEnvPkgs = [ gnome3.gnome-themes-standard evolution-data-server ]; # force build from vala preBuild = '' @@ -18,14 +28,14 @@ stdenv.mkDerivation rec { ''; nativeBuildInputs = [ vala automake autoconf pkgconfig intltool itstool wrapGAppsHook file ]; - buildInputs = [ gtk3 glib evolution_data_server gnome3.gsettings_desktop_schemas libnotify - folks gnome3.gnome_desktop telepathy_glib libsecret dbus_glib - libxml2 libsoup gnome3.gnome_online_accounts nspr nss - gdk_pixbuf gnome3.defaultIconTheme libchamplain clutter_gtk geocode_glib db ]; + buildInputs = [ gtk3 glib evolution-data-server gnome3.gsettings-desktop-schemas libnotify + folks gnome3.gnome-desktop telepathy-glib libsecret dbus-glib + libxml2 libsoup gnome3.gnome-online-accounts nspr nss + gdk_pixbuf gnome3.defaultIconTheme libchamplain clutter-gtk geocode-glib db ]; preFixup = '' gappsWrapperArgs+=( - --prefix XDG_DATA_DIRS : "${gnome3.gnome_themes_standard}/share" + --prefix XDG_DATA_DIRS : "${gnome3.gnome-themes-standard}/share" ) ''; diff --git a/pkgs/desktops/gnome-3/core/gnome-contacts/src.nix b/pkgs/desktops/gnome-3/core/gnome-contacts/src.nix deleted file mode 100644 index bf3df1bc84fe..000000000000 --- a/pkgs/desktops/gnome-3/core/gnome-contacts/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-contacts-3.26"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-contacts/3.26/gnome-contacts-3.26.tar.xz; - sha256 = "f819ac74b2ad581f9741614627f49ef519713324afd9e4fc0ea5ac261a5f68c1"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gnome-control-center/default.nix b/pkgs/desktops/gnome-3/core/gnome-control-center/default.nix index 9d20eb750ab9..8774de41c4b2 100644 --- a/pkgs/desktops/gnome-3/core/gnome-control-center/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-control-center/default.nix @@ -1,29 +1,39 @@ { fetchurl, stdenv, pkgconfig, gnome3, ibus, intltool, upower, wrapGAppsHook -, libcanberra_gtk3, accountsservice, libpwquality, libpulseaudio +, libcanberra-gtk3, accountsservice, libpwquality, libpulseaudio , gdk_pixbuf, librsvg, libnotify, libgudev , libxml2, polkit, libxslt, libgtop, libsoup, colord, colord-gtk , cracklib, libkrb5, networkmanagerapplet, networkmanager -, libwacom, samba, shared_mime_info, tzdata, libtool -, docbook_xsl, docbook_xsl_ns, modemmanager, clutter, clutter_gtk +, libwacom, samba, shared-mime-info, tzdata, libtool +, docbook_xsl, docbook_xsl_ns, modemmanager, clutter, clutter-gtk , fontconfig, sound-theme-freedesktop, grilo }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-control-center-${version}"; + version = "3.26.2"; - propagatedUserEnvPkgs = [ gnome3.gnome_themes_standard ]; + src = fetchurl { + url = "mirror://gnome/sources/gnome-control-center/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "07aed27d6317f2cad137daa6d94a37ad02c32b958dcd30c8f07d0319abfb04c5"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-control-center"; attrPath = "gnome3.gnome-control-center"; }; + }; + + propagatedUserEnvPkgs = [ gnome3.gnome-themes-standard ]; nativeBuildInputs = [ pkgconfig intltool wrapGAppsHook libtool libxslt docbook_xsl docbook_xsl_ns - shared_mime_info + shared-mime-info ]; buildInputs = with gnome3; [ - ibus gtk glib glib_networking upower gsettings_desktop_schemas - libxml2 gnome_desktop gnome_settings_daemon polkit libgtop - gnome_online_accounts libsoup colord libpulseaudio fontconfig colord-gtk + ibus gtk glib glib-networking upower gsettings-desktop-schemas + libxml2 gnome-desktop gnome-settings-daemon polkit libgtop + gnome-online-accounts libsoup colord libpulseaudio fontconfig colord-gtk accountsservice libkrb5 networkmanagerapplet libwacom samba libnotify - grilo libpwquality cracklib vino libcanberra_gtk3 libgudev - gdk_pixbuf defaultIconTheme librsvg clutter clutter_gtk + grilo libpwquality cracklib vino libcanberra-gtk3 libgudev + gdk_pixbuf defaultIconTheme librsvg clutter clutter-gtk networkmanager modemmanager gnome-bluetooth tracker ]; @@ -39,7 +49,7 @@ stdenv.mkDerivation rec { preFixup = '' gappsWrapperArgs+=( - --prefix XDG_DATA_DIRS : "${gnome3.gnome_themes_standard}/share:${sound-theme-freedesktop}/share" + --prefix XDG_DATA_DIRS : "${gnome3.gnome-themes-standard}/share:${sound-theme-freedesktop}/share" # Thumbnailers (for setting user profile pictures) --prefix XDG_DATA_DIRS : "${gdk_pixbuf}/share" --prefix XDG_DATA_DIRS : "${librsvg}/share" diff --git a/pkgs/desktops/gnome-3/core/gnome-control-center/src.nix b/pkgs/desktops/gnome-3/core/gnome-control-center/src.nix deleted file mode 100644 index 948768904aea..000000000000 --- a/pkgs/desktops/gnome-3/core/gnome-control-center/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-control-center-3.26.2"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-control-center/3.26/gnome-control-center-3.26.2.tar.xz; - sha256 = "07aed27d6317f2cad137daa6d94a37ad02c32b958dcd30c8f07d0319abfb04c5"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gnome-desktop/default.nix b/pkgs/desktops/gnome-3/core/gnome-desktop/default.nix index 99ff1b6f3a16..7e85e27d6be9 100644 --- a/pkgs/desktops/gnome-3/core/gnome-desktop/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-desktop/default.nix @@ -1,9 +1,19 @@ { stdenv, fetchurl, pkgconfig, libxslt, which, libX11, gnome3, gtk3, glib -, intltool, gnome_doc_utils, xkeyboard_config, isocodes, itstool, wayland +, intltool, gnome-doc-utils, xkeyboard_config, isocodes, itstool, wayland , libseccomp, bubblewrap, gobjectIntrospection }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-desktop-${version}"; + version = "3.26.2"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-desktop/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "f7561a7a313fc474b2c390cd9696df1f5c1e1556080e43f4afe042b1060e5f2a"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-desktop"; attrPath = "gnome3.gnome-desktop"; }; + }; # this should probably be setuphook for glib NIX_CFLAGS_COMPILE = "-I${glib.dev}/include/gio-unix-2.0"; @@ -11,14 +21,14 @@ stdenv.mkDerivation rec { enableParallelBuilding = true; nativeBuildInputs = [ - pkgconfig which itstool intltool libxslt gnome_doc_utils gobjectIntrospection + pkgconfig which itstool intltool libxslt gnome-doc-utils gobjectIntrospection ]; buildInputs = [ libX11 bubblewrap xkeyboard_config isocodes wayland gtk3 glib libseccomp ]; - propagatedBuildInputs = [ gnome3.gsettings_desktop_schemas ]; + propagatedBuildInputs = [ gnome3.gsettings-desktop-schemas ]; patches = [ ./bubblewrap-paths.patch diff --git a/pkgs/desktops/gnome-3/core/gnome-desktop/src.nix b/pkgs/desktops/gnome-3/core/gnome-desktop/src.nix deleted file mode 100644 index f3c0d446d3f1..000000000000 --- a/pkgs/desktops/gnome-3/core/gnome-desktop/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-desktop-3.26.2"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-desktop/3.26/gnome-desktop-3.26.2.tar.xz; - sha256 = "f7561a7a313fc474b2c390cd9696df1f5c1e1556080e43f4afe042b1060e5f2a"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gnome-dictionary/default.nix b/pkgs/desktops/gnome-3/core/gnome-dictionary/default.nix index 6cfdd45c2f9c..95fcfac1d751 100644 --- a/pkgs/desktops/gnome-3/core/gnome-dictionary/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-dictionary/default.nix @@ -1,18 +1,28 @@ -{ stdenv, fetchurl, meson, ninja, pkgconfig, desktop_file_utils, appstream-glib, libxslt +{ stdenv, fetchurl, meson, ninja, pkgconfig, desktop-file-utils, appstream-glib, libxslt , libxml2, gettext, itstool, wrapGAppsHook, docbook_xsl, docbook_xml_dtd_43 , gnome3, gtk, glib }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-dictionary-${version}"; + version = "3.26.1"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-dictionary/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "16b8bc248dcf68987826d5e39234b1bb7fd24a2607fcdbf4258fde88f012f300"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-dictionary"; attrPath = "gnome3.gnome-dictionary"; }; + }; doCheck = true; - propagatedUserEnvPkgs = [ gnome3.gnome_themes_standard ]; + propagatedUserEnvPkgs = [ gnome3.gnome-themes-standard ]; propagatedBuildInputs = [ gnome3.defaultIconTheme ]; nativeBuildInputs = [ meson ninja pkgconfig wrapGAppsHook libxml2 gettext itstool - desktop_file_utils appstream-glib libxslt docbook_xsl docbook_xml_dtd_43]; - buildInputs = [ gtk glib gnome3.gsettings_desktop_schemas ]; + desktop-file-utils appstream-glib libxslt docbook_xsl docbook_xml_dtd_43]; + buildInputs = [ gtk glib gnome3.gsettings-desktop-schemas ]; meta = with stdenv.lib; { homepage = https://wiki.gnome.org/Apps/Dictionary; diff --git a/pkgs/desktops/gnome-3/core/gnome-dictionary/src.nix b/pkgs/desktops/gnome-3/core/gnome-dictionary/src.nix deleted file mode 100644 index 92a50430bd1f..000000000000 --- a/pkgs/desktops/gnome-3/core/gnome-dictionary/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-dictionary-3.26.1"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-dictionary/3.26/gnome-dictionary-3.26.1.tar.xz; - sha256 = "16b8bc248dcf68987826d5e39234b1bb7fd24a2607fcdbf4258fde88f012f300"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gnome-disk-utility/default.nix b/pkgs/desktops/gnome-3/core/gnome-disk-utility/default.nix index 188ad99b73cd..0937f5c30823 100644 --- a/pkgs/desktops/gnome-3/core/gnome-disk-utility/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-disk-utility/default.nix @@ -1,18 +1,28 @@ { stdenv, gettext, fetchurl, pkgconfig, udisks2, libsecret, libdvdread , meson, ninja, gtk, glib, wrapGAppsHook, libnotify , itstool, gnome3, gdk_pixbuf, libxml2 -, libcanberra_gtk3, libxslt, docbook_xsl, libpwquality }: +, libcanberra-gtk3, libxslt, docbook_xsl, libpwquality }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-disk-utility-${version}"; + version = "3.26.2"; - propagatedUserEnvPkgs = [ gnome3.gnome_themes_standard ]; + src = fetchurl { + url = "mirror://gnome/sources/gnome-disk-utility/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "aa2b96c2c64d8bde6cf802ff8da5796720d0becb21111342ced0637961e256f2"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-disk-utility"; attrPath = "gnome3.gnome-disk-utility"; }; + }; + + propagatedUserEnvPkgs = [ gnome3.gnome-themes-standard ]; nativeBuildInputs = [ meson ninja pkgconfig gettext itstool libxslt docbook_xsl wrapGAppsHook libxml2 ]; - buildInputs = [ gtk glib libsecret libpwquality libnotify libdvdread libcanberra_gtk3 + buildInputs = [ gtk glib libsecret libpwquality libnotify libdvdread libcanberra-gtk3 gdk_pixbuf udisks2 gnome3.defaultIconTheme - gnome3.gnome_settings_daemon gnome3.gsettings_desktop_schemas ]; + gnome3.gnome-settings-daemon gnome3.gsettings-desktop-schemas ]; postPatch = '' chmod +x meson_post_install.py # patchShebangs requires executable file diff --git a/pkgs/desktops/gnome-3/core/gnome-disk-utility/src.nix b/pkgs/desktops/gnome-3/core/gnome-disk-utility/src.nix deleted file mode 100644 index e3241153a930..000000000000 --- a/pkgs/desktops/gnome-3/core/gnome-disk-utility/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-disk-utility-3.26.2"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-disk-utility/3.26/gnome-disk-utility-3.26.2.tar.xz; - sha256 = "aa2b96c2c64d8bde6cf802ff8da5796720d0becb21111342ced0637961e256f2"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gnome-font-viewer/default.nix b/pkgs/desktops/gnome-3/core/gnome-font-viewer/default.nix index dade56158fb1..3774ff32db04 100644 --- a/pkgs/desktops/gnome-3/core/gnome-font-viewer/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-font-viewer/default.nix @@ -3,12 +3,22 @@ , wrapGAppsHook, gnome3 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-font-viewer-${version}"; + version = "3.26.0"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-font-viewer/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "02768a62b4033de5ef9d00602e8c29e5de05255f879b0d9b4d731be9648fe9a0"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-font-viewer"; attrPath = "gnome3.gnome-font-viewer"; }; + }; doCheck = true; nativeBuildInputs = [ meson ninja pkgconfig gettext wrapGAppsHook libxml2 ]; - buildInputs = [ gtk3 glib gnome3.gnome_desktop gnome3.defaultIconTheme ]; + buildInputs = [ gtk3 glib gnome3.gnome-desktop gnome3.defaultIconTheme ]; # Do not run meson-postinstall.sh preConfigure = "sed -i '2,$ d' meson-postinstall.sh"; diff --git a/pkgs/desktops/gnome-3/core/gnome-font-viewer/src.nix b/pkgs/desktops/gnome-3/core/gnome-font-viewer/src.nix deleted file mode 100644 index c31f09938c92..000000000000 --- a/pkgs/desktops/gnome-3/core/gnome-font-viewer/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-font-viewer-3.26.0"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-font-viewer/3.26/gnome-font-viewer-3.26.0.tar.xz; - sha256 = "02768a62b4033de5ef9d00602e8c29e5de05255f879b0d9b4d731be9648fe9a0"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gnome-keyring/default.nix b/pkgs/desktops/gnome-3/core/gnome-keyring/default.nix index d4f5835ed3a2..f7f06e35d3ac 100644 --- a/pkgs/desktops/gnome-3/core/gnome-keyring/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-keyring/default.nix @@ -1,15 +1,25 @@ { stdenv, fetchurl, pkgconfig, dbus, libgcrypt, libtasn1, pam, python2, glib, libxslt -, intltool, pango, gcr, gdk_pixbuf, atk, p11_kit, wrapGAppsHook +, intltool, pango, gcr, gdk_pixbuf, atk, p11-kit, wrapGAppsHook , docbook_xsl, docbook_xml_dtd_42, gnome3 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-keyring-${version}"; + version = "3.20.1"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-keyring/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "134ci3mn6jjap59z3lrvyiip7zf2nlw5xvanr44yajs57xr4x5lp"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-keyring"; attrPath = "gnome3.gnome-keyring"; }; + }; outputs = [ "out" "dev" ]; buildInputs = with gnome3; [ - dbus libgcrypt pam gtk3 libgnome_keyring - pango gcr gdk_pixbuf atk p11_kit + dbus libgcrypt pam gtk3 libgnome-keyring + pango gcr gdk_pixbuf atk p11-kit ]; # In 3.20.1, tests do not support Python 3 diff --git a/pkgs/desktops/gnome-3/core/gnome-keyring/src.nix b/pkgs/desktops/gnome-3/core/gnome-keyring/src.nix deleted file mode 100644 index ffee6211232e..000000000000 --- a/pkgs/desktops/gnome-3/core/gnome-keyring/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-keyring-3.20.1"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-keyring/3.20/gnome-keyring-3.20.1.tar.xz; - sha256 = "134ci3mn6jjap59z3lrvyiip7zf2nlw5xvanr44yajs57xr4x5lp"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gnome-online-accounts/default.nix b/pkgs/desktops/gnome-3/core/gnome-online-accounts/default.nix index c6fa6cb16584..2abe8b28c039 100644 --- a/pkgs/desktops/gnome-3/core/gnome-online-accounts/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-online-accounts/default.nix @@ -1,13 +1,23 @@ { stdenv, fetchurl, pkgconfig, vala, glib, libxslt, gtk, wrapGAppsHook -, webkitgtk, json_glib, rest, libsecret, dbus_glib, gnome_common, gtk_doc -, telepathy_glib, intltool, dbus_libs, icu, glib_networking +, webkitgtk, json-glib, rest, libsecret, dbus-glib, gnome-common, gtk-doc +, telepathy-glib, intltool, dbus_libs, icu, glib-networking , libsoup, docbook_xsl_ns, docbook_xsl, gnome3, gcr, kerberos }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-online-accounts-${version}"; + version = "3.26.2"; - NIX_CFLAGS_COMPILE = "-I${dbus_glib.dev}/include/dbus-1.0 -I${dbus_libs.dev}/include/dbus-1.0"; + src = fetchurl { + url = "mirror://gnome/sources/gnome-online-accounts/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "49f8760d86fe33057eaeeb4f1667bc7f6163e428591e7aed9575563be10b17d1"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-online-accounts"; attrPath = "gnome3.gnome-online-accounts"; }; + }; + + NIX_CFLAGS_COMPILE = "-I${dbus-glib.dev}/include/dbus-1.0 -I${dbus_libs.dev}/include/dbus-1.0"; outputs = [ "out" "man" "dev" "devdoc" ]; @@ -22,11 +32,11 @@ stdenv.mkDerivation rec { enableParallelBuilding = true; nativeBuildInputs = [ - pkgconfig vala gnome_common intltool wrapGAppsHook - libxslt docbook_xsl_ns docbook_xsl gtk_doc + pkgconfig vala gnome-common intltool wrapGAppsHook + libxslt docbook_xsl_ns docbook_xsl gtk-doc ]; buildInputs = [ - glib gtk webkitgtk json_glib rest libsecret dbus_glib telepathy_glib glib_networking icu libsoup + glib gtk webkitgtk json-glib rest libsecret dbus-glib telepathy-glib glib-networking icu libsoup gcr kerberos ]; diff --git a/pkgs/desktops/gnome-3/core/gnome-online-accounts/src.nix b/pkgs/desktops/gnome-3/core/gnome-online-accounts/src.nix deleted file mode 100644 index c43183c7c57d..000000000000 --- a/pkgs/desktops/gnome-3/core/gnome-online-accounts/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-online-accounts-3.26.2"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-online-accounts/3.26/gnome-online-accounts-3.26.2.tar.xz; - sha256 = "49f8760d86fe33057eaeeb4f1667bc7f6163e428591e7aed9575563be10b17d1"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gnome-online-miners/default.nix b/pkgs/desktops/gnome-3/core/gnome-online-miners/default.nix index d8e878715602..1df5465382a9 100644 --- a/pkgs/desktops/gnome-3/core/gnome-online-miners/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-online-miners/default.nix @@ -1,14 +1,24 @@ { stdenv, fetchurl, pkgconfig, glib, gnome3, libxml2 -, libsoup, json_glib, gmp, openssl, dleyna-server, wrapGAppsHook }: +, libsoup, json-glib, gmp, openssl, dleyna-server, wrapGAppsHook }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-online-miners-${version}"; + version = "3.26.0"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-online-miners/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "7f404db5eccb87524a5dfcef5b6f38b11047b371081559afbe48c34dbca2a98e"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-online-miners"; attrPath = "gnome3.gnome-online-miners"; }; + }; nativeBuildInputs = [ pkgconfig wrapGAppsHook ]; buildInputs = [ glib gnome3.libgdata libxml2 libsoup gmp openssl gnome3.grilo gnome3.libzapojit gnome3.grilo-plugins - gnome3.gnome_online_accounts gnome3.libmediaart - gnome3.tracker gnome3.gfbgraph json_glib gnome3.rest + gnome3.gnome-online-accounts gnome3.libmediaart + gnome3.tracker gnome3.gfbgraph json-glib gnome3.rest dleyna-server ]; enableParallelBuilding = true; diff --git a/pkgs/desktops/gnome-3/core/gnome-online-miners/src.nix b/pkgs/desktops/gnome-3/core/gnome-online-miners/src.nix deleted file mode 100644 index 3b8306c6a1a5..000000000000 --- a/pkgs/desktops/gnome-3/core/gnome-online-miners/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-online-miners-3.26.0"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-online-miners/3.26/gnome-online-miners-3.26.0.tar.xz; - sha256 = "7f404db5eccb87524a5dfcef5b6f38b11047b371081559afbe48c34dbca2a98e"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gnome-screenshot/default.nix b/pkgs/desktops/gnome-3/core/gnome-screenshot/default.nix index 5986b07229f5..1f7aa4d874ad 100644 --- a/pkgs/desktops/gnome-3/core/gnome-screenshot/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-screenshot/default.nix @@ -1,9 +1,19 @@ -{ stdenv, gettext, libxml2, fetchurl, pkgconfig, libcanberra_gtk3 +{ stdenv, gettext, libxml2, fetchurl, pkgconfig, libcanberra-gtk3 , bash, gtk3, glib, meson, ninja, wrapGAppsHook, appstream-glib , gnome3, librsvg, gdk_pixbuf }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-screenshot-${version}"; + version = "3.26.0"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-screenshot/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "1bbc11595d3822f4b92319cdf9ba49dd00f5471b6046c590847dc424a874c8bb"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-screenshot"; attrPath = "gnome3.gnome-screenshot"; }; + }; doCheck = true; @@ -12,12 +22,12 @@ stdenv.mkDerivation rec { patchShebangs build-aux/postinstall.py ''; - propagatedUserEnvPkgs = [ gnome3.gnome_themes_standard ]; + propagatedUserEnvPkgs = [ gnome3.gnome-themes-standard ]; propagatedBuildInputs = [ gdk_pixbuf gnome3.defaultIconTheme librsvg ]; nativeBuildInputs = [ meson ninja pkgconfig gettext appstream-glib libxml2 wrapGAppsHook ]; - buildInputs = [ bash gtk3 glib libcanberra_gtk3 - gnome3.gsettings_desktop_schemas ]; + buildInputs = [ bash gtk3 glib libcanberra-gtk3 + gnome3.gsettings-desktop-schemas ]; patches = [ ./prevent-cache-updates.patch diff --git a/pkgs/desktops/gnome-3/core/gnome-screenshot/src.nix b/pkgs/desktops/gnome-3/core/gnome-screenshot/src.nix deleted file mode 100644 index 72b1e6625452..000000000000 --- a/pkgs/desktops/gnome-3/core/gnome-screenshot/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-screenshot-3.26.0"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-screenshot/3.26/gnome-screenshot-3.26.0.tar.xz; - sha256 = "1bbc11595d3822f4b92319cdf9ba49dd00f5471b6046c590847dc424a874c8bb"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gnome-session/default.nix b/pkgs/desktops/gnome-3/core/gnome-session/default.nix index 2cd92ce39ca1..c8bc61462213 100644 --- a/pkgs/desktops/gnome-3/core/gnome-session/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-session/default.nix @@ -1,15 +1,25 @@ -{ fetchurl, stdenv, pkgconfig, gnome3, glib, dbus_glib, json_glib, upower +{ fetchurl, stdenv, pkgconfig, gnome3, glib, dbus-glib, json-glib, upower , libxslt, intltool, makeWrapper, systemd, xorg, epoxy }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-session-${version}"; + version = "3.26.1"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-session/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "d9414b368db982d3837ca106e64019f18e6cdd5b13965bea6c7d02ddf5103708"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-session"; attrPath = "gnome3.gnome-session"; }; + }; configureFlags = "--enable-systemd"; buildInputs = with gnome3; - [ pkgconfig glib gnome_desktop gtk dbus_glib json_glib libxslt - gnome3.gnome_settings_daemon xorg.xtrans gnome3.defaultIconTheme - gsettings_desktop_schemas upower intltool gconf makeWrapper systemd + [ pkgconfig glib gnome-desktop gtk dbus-glib json-glib libxslt + gnome3.gnome-settings-daemon xorg.xtrans gnome3.defaultIconTheme + gsettings-desktop-schemas upower intltool gconf makeWrapper systemd epoxy ]; @@ -24,8 +34,8 @@ stdenv.mkDerivation rec { --prefix PATH : "${glib.dev}/bin" \ --prefix GI_TYPELIB_PATH : "$GI_TYPELIB_PATH" \ --suffix XDG_DATA_DIRS : "$out/share:$GSETTINGS_SCHEMAS_PATH" \ - --suffix XDG_DATA_DIRS : "${gnome3.gnome_shell}/share" \ - --suffix XDG_CONFIG_DIRS : "${gnome3.gnome_settings_daemon}/etc/xdg" + --suffix XDG_DATA_DIRS : "${gnome3.gnome-shell}/share" \ + --suffix XDG_CONFIG_DIRS : "${gnome3.gnome-settings-daemon}/etc/xdg" ''; meta = with stdenv.lib; { diff --git a/pkgs/desktops/gnome-3/core/gnome-session/src.nix b/pkgs/desktops/gnome-3/core/gnome-session/src.nix deleted file mode 100644 index bb9dec1efc23..000000000000 --- a/pkgs/desktops/gnome-3/core/gnome-session/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-session-3.26.1"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-session/3.26/gnome-session-3.26.1.tar.xz; - sha256 = "d9414b368db982d3837ca106e64019f18e6cdd5b13965bea6c7d02ddf5103708"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gnome-settings-daemon/default.nix b/pkgs/desktops/gnome-3/core/gnome-settings-daemon/default.nix index 6de97f3dea26..e3c84dfa9fd8 100644 --- a/pkgs/desktops/gnome-3/core/gnome-settings-daemon/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-settings-daemon/default.nix @@ -1,20 +1,30 @@ { fetchurl, stdenv, pkgconfig, gnome3, intltool, glib, libnotify, lcms2, libXtst -, libxkbfile, libpulseaudio, libcanberra_gtk3, upower, colord, libgweather, polkit +, libxkbfile, libpulseaudio, libcanberra-gtk3, upower, colord, libgweather, polkit , geoclue2, librsvg, xf86_input_wacom, udev, libgudev, libwacom, libxslt, libtool, networkmanager , docbook_xsl, docbook_xsl_ns, wrapGAppsHook, ibus, xkeyboard_config, tzdata }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-settings-daemon-${version}"; + version = "3.26.2"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-settings-daemon/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "5a3d156b35e03fa3c28fddd0321f6726082a711973dee2af686370faae2e75e4"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-settings-daemon"; attrPath = "gnome3.gnome-settings-daemon"; }; + }; # fatal error: gio/gunixfdlist.h: No such file or directory NIX_CFLAGS_COMPILE = "-I${glib.dev}/include/gio-unix-2.0"; buildInputs = with gnome3; - [ intltool pkgconfig ibus gtk glib gsettings_desktop_schemas networkmanager - libnotify gnome_desktop lcms2 libXtst libxkbfile libpulseaudio - libcanberra_gtk3 upower colord libgweather xkeyboard_config - polkit geocode_glib geoclue2 librsvg xf86_input_wacom udev libgudev libwacom libxslt - libtool docbook_xsl docbook_xsl_ns wrapGAppsHook gnome_themes_standard ]; + [ intltool pkgconfig ibus gtk glib gsettings-desktop-schemas networkmanager + libnotify gnome-desktop lcms2 libXtst libxkbfile libpulseaudio + libcanberra-gtk3 upower colord libgweather xkeyboard_config + polkit geocode-glib geoclue2 librsvg xf86_input_wacom udev libgudev libwacom libxslt + libtool docbook_xsl docbook_xsl_ns wrapGAppsHook gnome-themes-standard ]; postPatch = '' substituteInPlace plugins/datetime/tz.h --replace /usr/share/zoneinfo/zone.tab ${tzdata}/share/zoneinfo/zone.tab diff --git a/pkgs/desktops/gnome-3/core/gnome-settings-daemon/src.nix b/pkgs/desktops/gnome-3/core/gnome-settings-daemon/src.nix deleted file mode 100644 index 1c3fbbfc2efa..000000000000 --- a/pkgs/desktops/gnome-3/core/gnome-settings-daemon/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-settings-daemon-3.26.2"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-settings-daemon/3.26/gnome-settings-daemon-3.26.2.tar.xz; - sha256 = "5a3d156b35e03fa3c28fddd0321f6726082a711973dee2af686370faae2e75e4"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gnome-shell-extensions/default.nix b/pkgs/desktops/gnome-3/core/gnome-shell-extensions/default.nix index fd90b8867d7b..a76dd35711a8 100644 --- a/pkgs/desktops/gnome-3/core/gnome-shell-extensions/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-shell-extensions/default.nix @@ -2,7 +2,17 @@ , bash, makeWrapper, itstool, gnome3, file }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-shell-extensions-${version}"; + version = "3.26.2"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-shell-extensions/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "aefda4d810ef5ceb9402e2d620f4bdc1dc40c9cc4f6a51749840f7dd08628ab6"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-shell-extensions"; attrPath = "gnome3.gnome-shell-extensions"; }; + }; doCheck = true; diff --git a/pkgs/desktops/gnome-3/core/gnome-shell-extensions/src.nix b/pkgs/desktops/gnome-3/core/gnome-shell-extensions/src.nix deleted file mode 100644 index 150a15d0a5f3..000000000000 --- a/pkgs/desktops/gnome-3/core/gnome-shell-extensions/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-shell-extensions-3.26.2"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-shell-extensions/3.26/gnome-shell-extensions-3.26.2.tar.xz; - sha256 = "aefda4d810ef5ceb9402e2d620f4bdc1dc40c9cc4f6a51749840f7dd08628ab6"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gnome-shell/default.nix b/pkgs/desktops/gnome-3/core/gnome-shell/default.nix index 693560454b17..026f5436237a 100644 --- a/pkgs/desktops/gnome-3/core/gnome-shell/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-shell/default.nix @@ -1,7 +1,7 @@ -{ fetchurl, fetchpatch, stdenv, meson, ninja, pkgconfig, gnome3, json_glib, libcroco, gettext, libsecret -, python3Packages, libsoup, polkit, clutter, networkmanager, docbook_xsl , docbook_xsl_ns, at_spi2_core -, libstartup_notification, telepathy_glib, telepathy_logger, libXtst, p11_kit, unzip, glibcLocales -, sqlite, libgweather, libcanberra_gtk3, librsvg, geoclue2, perl, docbook_xml_dtd_42 +{ fetchurl, fetchpatch, stdenv, meson, ninja, pkgconfig, gnome3, json-glib, libcroco, gettext, libsecret +, python3Packages, libsoup, polkit, clutter, networkmanager, docbook_xsl , docbook_xsl_ns, at-spi2-core +, libstartup_notification, telepathy-glib, telepathy-logger, libXtst, p11-kit, unzip, glibcLocales +, sqlite, libgweather, libcanberra-gtk3, librsvg, geoclue2, perl, docbook_xml_dtd_42 , libpulseaudio, libical, nss, gobjectIntrospection, gstreamer, wrapGAppsHook , accountsservice, gdk_pixbuf, gdm, upower, ibus, networkmanagerapplet , gst_all_1 }: @@ -12,7 +12,13 @@ let pythonEnv = python3Packages.python.withPackages ( ps: with ps; [ pygobject3 ] ); in stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-shell-${version}"; + version = "3.26.2"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-shell/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "e5a87f2f838d981db9823352b90b2ce2f40d24d31ed9f062dccfa41b820e0b1c"; + }; # Needed to find /etc/NetworkManager/VPN mesonFlags = [ "--sysconfdir=/etc" ]; @@ -21,17 +27,17 @@ in stdenv.mkDerivation rec { nativeBuildInputs = [ meson ninja gettext docbook_xsl docbook_xsl_ns docbook_xml_dtd_42 perl wrapGAppsHook glibcLocales ]; buildInputs = with gnome3; - [ gsettings_desktop_schemas gnome_keyring gnome-menus glib gcr json_glib accountsservice + [ gsettings-desktop-schemas gnome-keyring gnome-menus glib gcr json-glib accountsservice libcroco libsecret pkgconfig libsoup polkit gdk_pixbuf (librsvg.override { enableIntrospection = true; }) - clutter networkmanager libstartup_notification telepathy_glib - libXtst p11_kit networkmanagerapplet gjs mutter libpulseaudio caribou evolution_data_server + clutter networkmanager libstartup_notification telepathy-glib + libXtst p11-kit networkmanagerapplet gjs mutter libpulseaudio caribou evolution-data-server libical nss gtk gstreamer gdm - libcanberra_gtk3 gnome_control_center geoclue2 + libcanberra-gtk3 gnome-control-center geoclue2 defaultIconTheme sqlite gnome3.gnome-bluetooth libgweather # not declared at build time, but typelib is needed at runtime gnome3.gnome-clocks # schemas needed - at_spi2_core upower ibus gnome_desktop telepathy_logger gnome3.gnome_settings_daemon + at-spi2-core upower ibus gnome-desktop telepathy-logger gnome3.gnome-settings-daemon gst_all_1.gst-plugins-good # recording gobjectIntrospection (stdenv.lib.getLib dconf) ]; propagatedUserEnvPkgs = [ @@ -70,6 +76,7 @@ in stdenv.mkDerivation rec { passthru = { mozillaPlugin = "/lib/mozilla/plugins"; + updateScript = gnome3.updateScript { packageName = "gnome-shell"; attrPath = "gnome3.gnome-shell"; }; }; meta = with stdenv.lib; { diff --git a/pkgs/desktops/gnome-3/core/gnome-shell/src.nix b/pkgs/desktops/gnome-3/core/gnome-shell/src.nix deleted file mode 100644 index 83cdd0682fda..000000000000 --- a/pkgs/desktops/gnome-3/core/gnome-shell/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-shell-3.26.2"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-shell/3.26/gnome-shell-3.26.2.tar.xz; - sha256 = "e5a87f2f838d981db9823352b90b2ce2f40d24d31ed9f062dccfa41b820e0b1c"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gnome-software/default.nix b/pkgs/desktops/gnome-3/core/gnome-software/default.nix index 37650ae5a142..354924c5c436 100644 --- a/pkgs/desktops/gnome-3/core/gnome-software/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-software/default.nix @@ -1,15 +1,25 @@ { stdenv, fetchurl, pkgconfig, meson, ninja, gettext, gnome3, wrapGAppsHook, packagekit, ostree , glib, appstream-glib, libsoup, polkit, attr, acl, libyaml, isocodes, gtkspell3, libxslt -, json_glib, libsecret, valgrind-light, docbook_xsl, docbook_xml_dtd_42, gtk_doc, desktop_file_utils }: +, json-glib, libsecret, valgrind-light, docbook_xsl, docbook_xml_dtd_42, gtk-doc, desktop-file-utils }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-software-${version}"; + version = "3.26.3"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-software/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "2f74fd5fb222c99d4fcb91500cea0c62a0eb8022700bdea51acecb41c63f8e48"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-software"; attrPath = "gnome3.gnome-software"; }; + }; nativeBuildInputs = [ pkgconfig meson ninja gettext wrapGAppsHook libxslt docbook_xml_dtd_42 - valgrind-light docbook_xsl gtk_doc desktop_file_utils ]; + valgrind-light docbook_xsl gtk-doc desktop-file-utils ]; buildInputs = [ gnome3.gtk glib packagekit appstream-glib libsoup - gnome3.gsettings_desktop_schemas gnome3.gnome_desktop - gtkspell3 json_glib libsecret ostree + gnome3.gsettings-desktop-schemas gnome3.gnome-desktop + gtkspell3 json-glib libsecret ostree polkit attr acl libyaml ]; propagatedBuildInputs = [ isocodes ]; diff --git a/pkgs/desktops/gnome-3/core/gnome-software/src.nix b/pkgs/desktops/gnome-3/core/gnome-software/src.nix deleted file mode 100644 index 99c6415e83dc..000000000000 --- a/pkgs/desktops/gnome-3/core/gnome-software/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-software-3.26.3"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-software/3.26/gnome-software-3.26.3.tar.xz; - sha256 = "2f74fd5fb222c99d4fcb91500cea0c62a0eb8022700bdea51acecb41c63f8e48"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gnome-system-log/default.nix b/pkgs/desktops/gnome-3/core/gnome-system-log/default.nix index d66efca66d9c..673140c3e1b6 100644 --- a/pkgs/desktops/gnome-3/core/gnome-system-log/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-system-log/default.nix @@ -14,16 +14,16 @@ stdenv.mkDerivation rec { NIX_CFLAGS_COMPILE = "-I${gnome3.glib.dev}/include/gio-unix-2.0"; - propagatedUserEnvPkgs = [ gnome3.gnome_themes_standard ]; + propagatedUserEnvPkgs = [ gnome3.gnome-themes-standard ]; propagatedBuildInputs = [ gdk_pixbuf gnome3.defaultIconTheme librsvg ]; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ bash gtk3 glib intltool itstool - gnome3.gsettings_desktop_schemas wrapGAppsHook libxml2 ]; + gnome3.gsettings-desktop-schemas wrapGAppsHook libxml2 ]; preFixup = '' gappsWrapperArgs+=( - --prefix XDG_DATA_DIRS : "${gtk3.out}/share:${gnome3.gnome_themes_standard}/share" + --prefix XDG_DATA_DIRS : "${gtk3.out}/share:${gnome3.gnome-themes-standard}/share" ) ''; diff --git a/pkgs/desktops/gnome-3/core/gnome-system-monitor/default.nix b/pkgs/desktops/gnome-3/core/gnome-system-monitor/default.nix index c32d9d95d88f..0e64bc4362c7 100644 --- a/pkgs/desktops/gnome-3/core/gnome-system-monitor/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-system-monitor/default.nix @@ -3,21 +3,31 @@ , itstool, gnome3, librsvg, gdk_pixbuf, libgtop, systemd }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-system-monitor-${version}"; + version = "3.26.0"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-system-monitor/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "f848a8c2ca5e164cf09d3a205dd49e4e4bf4b60d43b0969c10443eb519d0e6b3"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-system-monitor"; attrPath = "gnome3.gnome-system-monitor"; }; + }; doCheck = true; - propagatedUserEnvPkgs = [ gnome3.gnome_themes_standard ]; + propagatedUserEnvPkgs = [ gnome3.gnome-themes-standard ]; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ bash gtk3 glib intltool itstool libxml2 gtkmm3 libgtop wrapGAppsHook gdk_pixbuf gnome3.defaultIconTheme librsvg - gnome3.gsettings_desktop_schemas systemd ]; + gnome3.gsettings-desktop-schemas systemd ]; preFixup = '' gappsWrapperArgs+=( - --prefix XDG_DATA_DIRS : "${gtk3.out}/share:${gnome3.gnome_themes_standard}/share" + --prefix XDG_DATA_DIRS : "${gtk3.out}/share:${gnome3.gnome-themes-standard}/share" ) ''; diff --git a/pkgs/desktops/gnome-3/core/gnome-system-monitor/src.nix b/pkgs/desktops/gnome-3/core/gnome-system-monitor/src.nix deleted file mode 100644 index b5d527632efe..000000000000 --- a/pkgs/desktops/gnome-3/core/gnome-system-monitor/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-system-monitor-3.26.0"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-system-monitor/3.26/gnome-system-monitor-3.26.0.tar.xz; - sha256 = "f848a8c2ca5e164cf09d3a205dd49e4e4bf4b60d43b0969c10443eb519d0e6b3"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gnome-terminal/default.nix b/pkgs/desktops/gnome-3/core/gnome-terminal/default.nix index b28c3a4c45d8..703bb6fe110e 100644 --- a/pkgs/desktops/gnome-3/core/gnome-terminal/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-terminal/default.nix @@ -1,21 +1,31 @@ { stdenv, fetchurl, pkgconfig, libxml2, gnome3 -, gnome_doc_utils, intltool, which, libuuid, vala -, desktop_file_utils, itstool, wrapGAppsHook, appdata-tools }: +, gnome-doc-utils, intltool, which, libuuid, vala +, desktop-file-utils, itstool, wrapGAppsHook, appdata-tools }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-terminal-${version}"; + version = "3.26.2"; - buildInputs = [ gnome3.gtk gnome3.gsettings_desktop_schemas gnome3.vte appdata-tools + src = fetchurl { + url = "mirror://gnome/sources/gnome-terminal/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "3a9ba414a814569476515275ad303d8056f296b2669234447712559aa97005b0"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-terminal"; attrPath = "gnome3.gnome-terminal"; }; + }; + + buildInputs = [ gnome3.gtk gnome3.gsettings-desktop-schemas gnome3.vte appdata-tools gnome3.dconf itstool gnome3.nautilus ]; - nativeBuildInputs = [ pkgconfig intltool gnome_doc_utils which libuuid libxml2 - vala desktop_file_utils wrapGAppsHook ]; + nativeBuildInputs = [ pkgconfig intltool gnome-doc-utils which libuuid libxml2 + vala desktop-file-utils wrapGAppsHook ]; # Silly ./configure, it looks for dbus file from gnome-shell in the # installation tree of the package it is configuring. postPatch = '' - substituteInPlace configure --replace '$(eval echo $(eval echo $(eval echo ''${dbusinterfacedir})))/org.gnome.ShellSearchProvider2.xml' "${gnome3.gnome_shell}/share/dbus-1/interfaces/org.gnome.ShellSearchProvider2.xml" - substituteInPlace src/Makefile.in --replace '$(dbusinterfacedir)/org.gnome.ShellSearchProvider2.xml' "${gnome3.gnome_shell}/share/dbus-1/interfaces/org.gnome.ShellSearchProvider2.xml" + substituteInPlace configure --replace '$(eval echo $(eval echo $(eval echo ''${dbusinterfacedir})))/org.gnome.ShellSearchProvider2.xml' "${gnome3.gnome-shell}/share/dbus-1/interfaces/org.gnome.ShellSearchProvider2.xml" + substituteInPlace src/Makefile.in --replace '$(dbusinterfacedir)/org.gnome.ShellSearchProvider2.xml' "${gnome3.gnome-shell}/share/dbus-1/interfaces/org.gnome.ShellSearchProvider2.xml" ''; # FIXME: enable for gnome3 diff --git a/pkgs/desktops/gnome-3/core/gnome-terminal/src.nix b/pkgs/desktops/gnome-3/core/gnome-terminal/src.nix deleted file mode 100644 index a6072ba7ca5e..000000000000 --- a/pkgs/desktops/gnome-3/core/gnome-terminal/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-terminal-3.26.2"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-terminal/3.26/gnome-terminal-3.26.2.tar.xz; - sha256 = "3a9ba414a814569476515275ad303d8056f296b2669234447712559aa97005b0"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gnome-themes-standard/default.nix b/pkgs/desktops/gnome-3/core/gnome-themes-standard/default.nix index 3db252d063f2..720120b392de 100644 --- a/pkgs/desktops/gnome-3/core/gnome-themes-standard/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-themes-standard/default.nix @@ -2,7 +2,17 @@ , gdk_pixbuf }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-themes-standard-${version}"; + version = "3.22.3"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-themes-standard/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "61dc87c52261cfd5b94d65e8ffd923ddeb5d3944562f84942eeeb197ab8ab56a"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-themes-standard"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ intltool gtk3 librsvg pango atk gtk2 gdk_pixbuf diff --git a/pkgs/desktops/gnome-3/core/gnome-themes-standard/src.nix b/pkgs/desktops/gnome-3/core/gnome-themes-standard/src.nix deleted file mode 100644 index dcda746c8dd1..000000000000 --- a/pkgs/desktops/gnome-3/core/gnome-themes-standard/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-themes-standard-3.22.3"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-themes-standard/3.22/gnome-themes-standard-3.22.3.tar.xz; - sha256 = "61dc87c52261cfd5b94d65e8ffd923ddeb5d3944562f84942eeeb197ab8ab56a"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gnome-user-docs/default.nix b/pkgs/desktops/gnome-3/core/gnome-user-docs/default.nix index 6ab72ab7826d..8854e7a2d0c3 100644 --- a/pkgs/desktops/gnome-3/core/gnome-user-docs/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-user-docs/default.nix @@ -1,7 +1,17 @@ { stdenv, fetchurl, pkgconfig, file, gnome3, itstool, libxml2, intltool }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-user-docs-${version}"; + version = "3.26.2.1"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-user-docs/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "93136f5baffd160c14e1b39f0ac60b9768975edac2da2b30c945faef534af8f5"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-user-docs"; attrPath = "gnome3.gnome-user-docs"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ gnome3.yelp itstool libxml2 intltool ]; diff --git a/pkgs/desktops/gnome-3/core/gnome-user-docs/src.nix b/pkgs/desktops/gnome-3/core/gnome-user-docs/src.nix deleted file mode 100644 index c18bad6b4cd8..000000000000 --- a/pkgs/desktops/gnome-3/core/gnome-user-docs/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-user-docs-3.26.2.1"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-user-docs/3.26/gnome-user-docs-3.26.2.1.tar.xz; - sha256 = "93136f5baffd160c14e1b39f0ac60b9768975edac2da2b30c945faef534af8f5"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gnome-user-share/default.nix b/pkgs/desktops/gnome-3/core/gnome-user-share/default.nix index 0b83f6eb2267..642ee0badf1e 100644 --- a/pkgs/desktops/gnome-3/core/gnome-user-share/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-user-share/default.nix @@ -1,10 +1,20 @@ { stdenv, intltool, fetchurl, apacheHttpd, nautilus , pkgconfig, gtk3, glib, libxml2, gnused, systemd , bash, wrapGAppsHook, itstool, libnotify, libtool, mod_dnssd -, gnome3, librsvg, gdk_pixbuf, file, libcanberra_gtk3 }: +, gnome3, librsvg, gdk_pixbuf, file, libcanberra-gtk3 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-user-share-${version}"; + version = "3.18.3"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-user-share/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "3092fa7ad137531e35484195dde4ecbbc75a8a3d9b8209aef4c852717cf4bbf1"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-user-share"; attrPath = "gnome3.gnome-user-share"; }; + }; doCheck = true; @@ -24,7 +34,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig ]; buildInputs = [ gtk3 glib intltool itstool libxml2 libtool wrapGAppsHook file gdk_pixbuf gnome3.defaultIconTheme librsvg - nautilus libnotify libcanberra_gtk3 systemd ]; + nautilus libnotify libcanberra-gtk3 systemd ]; postInstall = '' mkdir -p $out/share/gsettings-schemas/$name diff --git a/pkgs/desktops/gnome-3/core/gnome-user-share/src.nix b/pkgs/desktops/gnome-3/core/gnome-user-share/src.nix deleted file mode 100644 index 2d06f9e7a7cf..000000000000 --- a/pkgs/desktops/gnome-3/core/gnome-user-share/src.nix +++ /dev/null @@ -1,12 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: rec { - major = "3.18"; - minor = "3"; - name = "gnome-user-share-${major}.${minor}"; - - src = fetchurl { - url = "mirror://gnome/sources/gnome-user-share/${major}/${name}.tar.xz"; - sha256 = "3092fa7ad137531e35484195dde4ecbbc75a8a3d9b8209aef4c852717cf4bbf1"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/grilo-plugins/default.nix b/pkgs/desktops/gnome-3/core/grilo-plugins/default.nix index eb600770e0ac..63dc6870ad40 100644 --- a/pkgs/desktops/gnome-3/core/grilo-plugins/default.nix +++ b/pkgs/desktops/gnome-3/core/grilo-plugins/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, pkgconfig, file, intltool, glib, sqlite -, gnome3, libxml2, gupnp, gssdp, lua5, liboauth, gupnp_av -, gmime, json_glib, avahi, tracker, dleyna-server, itstool }: +, gnome3, libxml2, gupnp, gssdp, lua5, liboauth, gupnp-av +, gmime, json-glib, avahi, tracker, dleyna-server, itstool }: stdenv.mkDerivation rec { major = "0.3"; @@ -16,8 +16,8 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig ]; buildInputs = [ gnome3.grilo libxml2 gupnp gssdp gnome3.libgdata - lua5 liboauth gupnp_av sqlite gnome3.gnome_online_accounts - gnome3.totem-pl-parser gnome3.rest gmime json_glib + lua5 liboauth gupnp-av sqlite gnome3.gnome-online-accounts + gnome3.totem-pl-parser gnome3.rest gmime json-glib avahi gnome3.libmediaart tracker dleyna-server intltool itstool ]; meta = with stdenv.lib; { diff --git a/pkgs/desktops/gnome-3/core/gsettings-desktop-schemas/default.nix b/pkgs/desktops/gnome-3/core/gsettings-desktop-schemas/default.nix index 977dd7ffd6fb..89614a327a6a 100644 --- a/pkgs/desktops/gnome-3/core/gsettings-desktop-schemas/default.nix +++ b/pkgs/desktops/gnome-3/core/gsettings-desktop-schemas/default.nix @@ -1,9 +1,19 @@ { stdenv, fetchurl, pkgconfig, intltool, glib, gobjectIntrospection # just for passthru -, gnome3, gtk3, gsettings_desktop_schemas }: +, gnome3, gtk3, gsettings-desktop-schemas }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gsettings-desktop-schemas-${version}"; + version = "3.24.1"; + + src = fetchurl { + url = "mirror://gnome/sources/gsettings-desktop-schemas/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "76a3fa309f9de6074d66848987214f0b128124ba7184c958c15ac78a8ac7eea7"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gsettings-desktop-schemas"; }; + }; preInstall = '' mkdir -p $out/share/gsettings-schemas/${name}/glib-2.0/schemas diff --git a/pkgs/desktops/gnome-3/core/gsettings-desktop-schemas/src.nix b/pkgs/desktops/gnome-3/core/gsettings-desktop-schemas/src.nix deleted file mode 100644 index 1eca56c509bf..000000000000 --- a/pkgs/desktops/gnome-3/core/gsettings-desktop-schemas/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gsettings-desktop-schemas-3.24.1"; - - src = fetchurl { - url = mirror://gnome/sources/gsettings-desktop-schemas/3.24/gsettings-desktop-schemas-3.24.1.tar.xz; - sha256 = "76a3fa309f9de6074d66848987214f0b128124ba7184c958c15ac78a8ac7eea7"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gtksourceview/default.nix b/pkgs/desktops/gnome-3/core/gtksourceview/default.nix index 45001e551273..b3948942c12b 100644 --- a/pkgs/desktops/gnome-3/core/gtksourceview/default.nix +++ b/pkgs/desktops/gnome-3/core/gtksourceview/default.nix @@ -1,16 +1,26 @@ { stdenv, fetchurl, pkgconfig, atk, cairo, glib, gtk3, pango -, libxml2, perl, intltool, gettext, gnome3, gobjectIntrospection, dbus, xvfb_run, shared_mime_info }: +, libxml2, perl, intltool, gettext, gnome3, gobjectIntrospection, dbus, xvfb_run, shared-mime-info }: let checkInputs = [ xvfb_run dbus ]; in stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gtksourceview-${version}"; + version = "3.24.6"; + + src = fetchurl { + url = "mirror://gnome/sources/gtksourceview/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "7aa6bdfebcdc73a763dddeaa42f190c40835e6f8495bb9eb8f78587e2577c188"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gtksourceview"; attrPath = "gnome3.gtksourceview"; }; + }; propagatedBuildInputs = [ # Required by gtksourceview-3.0.pc gtk3 # Used by gtk_source_language_manager_guess_language - shared_mime_info + shared-mime-info ]; outputs = [ "out" "dev" ]; diff --git a/pkgs/desktops/gnome-3/core/gtksourceview/src.nix b/pkgs/desktops/gnome-3/core/gtksourceview/src.nix deleted file mode 100644 index ec7a8a6aaa57..000000000000 --- a/pkgs/desktops/gnome-3/core/gtksourceview/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gtksourceview-3.24.6"; - - src = fetchurl { - url = mirror://gnome/sources/gtksourceview/3.24/gtksourceview-3.24.6.tar.xz; - sha256 = "7aa6bdfebcdc73a763dddeaa42f190c40835e6f8495bb9eb8f78587e2577c188"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gtksourceviewmm/default.nix b/pkgs/desktops/gnome-3/core/gtksourceviewmm/default.nix index 7763867bcbff..ae4f75bf76a7 100644 --- a/pkgs/desktops/gnome-3/core/gtksourceviewmm/default.nix +++ b/pkgs/desktops/gnome-3/core/gtksourceviewmm/default.nix @@ -1,7 +1,17 @@ -{ stdenv, fetchurl, pkgconfig, gtkmm, glibmm, gtksourceview }: +{ stdenv, fetchurl, pkgconfig, gtkmm, glibmm, gtksourceview, gnome3 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gtksourceviewmm-${version}"; + version = "3.21.2"; + + src = fetchurl { + url = "mirror://gnome/sources/gtksourceviewmm/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "d21296d8624a1046841bfec082021b7b966df0b62e19ee300828519bc54dd9c6"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gtksourceviewmm"; attrPath = "gnome3.gtksourceviewmm"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ glibmm gtkmm gtksourceview ]; diff --git a/pkgs/desktops/gnome-3/core/gtksourceviewmm/src.nix b/pkgs/desktops/gnome-3/core/gtksourceviewmm/src.nix deleted file mode 100644 index 21618c45e051..000000000000 --- a/pkgs/desktops/gnome-3/core/gtksourceviewmm/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gtksourceviewmm-3.21.2"; - - src = fetchurl { - url = mirror://gnome/sources/gtksourceviewmm/3.21/gtksourceviewmm-3.21.2.tar.xz; - sha256 = "d21296d8624a1046841bfec082021b7b966df0b62e19ee300828519bc54dd9c6"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/gucharmap/default.nix b/pkgs/desktops/gnome-3/core/gucharmap/default.nix index 731ff7e2688e..ff9b232cb7a8 100644 --- a/pkgs/desktops/gnome-3/core/gucharmap/default.nix +++ b/pkgs/desktops/gnome-3/core/gucharmap/default.nix @@ -1,5 +1,5 @@ { stdenv, intltool, fetchurl, pkgconfig, gtk3 -, glib, desktop_file_utils, bash, appdata-tools +, glib, desktop-file-utils, bash, appdata-tools , wrapGAppsHook, gnome3, itstool, libxml2 , callPackage, unzip, gobjectIntrospection }: @@ -7,20 +7,30 @@ # use packaged gnome3.adwaita-icon-theme stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gucharmap-${version}"; + version = "10.0.3"; + + src = fetchurl { + url = "mirror://gnome/sources/gucharmap/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "ac07d75924e2d8f436d9492e8f7d54cf109404d34de06886a3967563cd1726a4"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gucharmap"; }; + }; doCheck = true; - propagatedUserEnvPkgs = [ gnome3.gnome_themes_standard ]; + propagatedUserEnvPkgs = [ gnome3.gnome-themes-standard ]; preConfigure = "patchShebangs gucharmap/gen-guch-unicode-tables.pl"; nativeBuildInputs = [ pkgconfig wrapGAppsHook unzip intltool itstool appdata-tools - gnome3.yelp_tools libxml2 desktop_file_utils gobjectIntrospection + gnome3.yelp-tools libxml2 desktop-file-utils gobjectIntrospection ]; - buildInputs = [ gtk3 glib gnome3.gsettings_desktop_schemas ]; + buildInputs = [ gtk3 glib gnome3.gsettings-desktop-schemas ]; unicode-data = callPackage ./unicode-data.nix {}; diff --git a/pkgs/desktops/gnome-3/core/gucharmap/src.nix b/pkgs/desktops/gnome-3/core/gucharmap/src.nix deleted file mode 100644 index fb38e3bf386b..000000000000 --- a/pkgs/desktops/gnome-3/core/gucharmap/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gucharmap-10.0.3"; - - src = fetchurl { - url = mirror://gnome/sources/gucharmap/10.0/gucharmap-10.0.3.tar.xz; - sha256 = "ac07d75924e2d8f436d9492e8f7d54cf109404d34de06886a3967563cd1726a4"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/libgdata/default.nix b/pkgs/desktops/gnome-3/core/libgdata/default.nix index ddf245f49e06..816ed6476e6b 100644 --- a/pkgs/desktops/gnome-3/core/libgdata/default.nix +++ b/pkgs/desktops/gnome-3/core/libgdata/default.nix @@ -1,5 +1,5 @@ -{ stdenv, fetchurl, pkgconfig, intltool, libxml2, glib, json_glib -, gobjectIntrospection, liboauth, gnome3, p11_kit, openssl, uhttpmock }: +{ stdenv, fetchurl, pkgconfig, intltool, libxml2, glib, json-glib +, gobjectIntrospection, liboauth, gnome3, p11-kit, openssl, uhttpmock }: let majorVersion = "0.17"; @@ -16,9 +16,9 @@ stdenv.mkDerivation rec { buildInputs = with gnome3; [ pkgconfig libsoup intltool libxml2 glib gobjectIntrospection - liboauth gcr gnome_online_accounts p11_kit openssl uhttpmock ]; + liboauth gcr gnome-online-accounts p11-kit openssl uhttpmock ]; - propagatedBuildInputs = [ json_glib ]; + propagatedBuildInputs = [ json-glib ]; meta = with stdenv.lib; { description = "GData API library"; diff --git a/pkgs/desktops/gnome-3/core/libgnomekbd/default.nix b/pkgs/desktops/gnome-3/core/libgnomekbd/default.nix index 319f089b9206..6301f6f4ab65 100644 --- a/pkgs/desktops/gnome-3/core/libgnomekbd/default.nix +++ b/pkgs/desktops/gnome-3/core/libgnomekbd/default.nix @@ -1,7 +1,17 @@ { stdenv, fetchurl, pkgconfig, file, intltool, glib, gtk3, libxklavier, makeWrapper, gnome3 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "libgnomekbd-${version}"; + version = "3.26.0"; + + src = fetchurl { + url = "mirror://gnome/sources/libgnomekbd/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "ea3b418c57c30615f7ee5b6f718def7c9d09ce34637324361150744258968875"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "libgnomekbd"; attrPath = "gnome3.libgnomekbd"; }; + }; nativeBuildInputs = [ pkgconfig file intltool makeWrapper ]; buildInputs = [ glib gtk3 libxklavier ]; diff --git a/pkgs/desktops/gnome-3/core/libgnomekbd/src.nix b/pkgs/desktops/gnome-3/core/libgnomekbd/src.nix deleted file mode 100644 index 431006daf4fb..000000000000 --- a/pkgs/desktops/gnome-3/core/libgnomekbd/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "libgnomekbd-3.26.0"; - - src = fetchurl { - url = mirror://gnome/sources/libgnomekbd/3.26/libgnomekbd-3.26.0.tar.xz; - sha256 = "ea3b418c57c30615f7ee5b6f718def7c9d09ce34637324361150744258968875"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/libgweather/default.nix b/pkgs/desktops/gnome-3/core/libgweather/default.nix index 01b3c9bc0930..ad14abb10008 100644 --- a/pkgs/desktops/gnome-3/core/libgweather/default.nix +++ b/pkgs/desktops/gnome-3/core/libgweather/default.nix @@ -2,10 +2,20 @@ , pango, gdk_pixbuf, atk, tzdata, gnome3 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "libgweather-${version}"; + version = "3.26.1"; + + src = fetchurl { + url = "mirror://gnome/sources/libgweather/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "fca78470b345bce948e0333cab0a7c52c32562fc4a75de37061248a64e8fc4b8"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "libgweather"; attrPath = "gnome3.libgweather"; }; + }; configureFlags = [ "--with-zoneinfo-dir=${tzdata}/share/zoneinfo" "--enable-vala" ]; - propagatedBuildInputs = [ libxml2 gtk libsoup gconf pango gdk_pixbuf atk gnome3.geocode_glib ]; + propagatedBuildInputs = [ libxml2 gtk libsoup gconf pango gdk_pixbuf atk gnome3.geocode-glib ]; nativeBuildInputs = [ pkgconfig intltool gnome3.vala ]; # Prevent building vapi into ${vala} derivation directory diff --git a/pkgs/desktops/gnome-3/core/libgweather/src.nix b/pkgs/desktops/gnome-3/core/libgweather/src.nix deleted file mode 100644 index 799713c28a4a..000000000000 --- a/pkgs/desktops/gnome-3/core/libgweather/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "libgweather-3.26.1"; - - src = fetchurl { - url = mirror://gnome/sources/libgweather/3.26/libgweather-3.26.1.tar.xz; - sha256 = "fca78470b345bce948e0333cab0a7c52c32562fc4a75de37061248a64e8fc4b8"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/libpeas/default.nix b/pkgs/desktops/gnome-3/core/libpeas/default.nix index 998a1a02b3f9..8eaa927ac7b9 100644 --- a/pkgs/desktops/gnome-3/core/libpeas/default.nix +++ b/pkgs/desktops/gnome-3/core/libpeas/default.nix @@ -3,7 +3,17 @@ }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "libpeas-${version}"; + version = "1.22.0"; + + src = fetchurl { + url = "mirror://gnome/sources/libpeas/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "0qm908kisyjzjxvygdl18hjqxvvgkq9w0phs2g55pck277sw0bsv"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "libpeas"; attrPath = "gnome3.libpeas"; }; + }; configureFlags = [ "--enable-python3" ]; diff --git a/pkgs/desktops/gnome-3/core/libpeas/src.nix b/pkgs/desktops/gnome-3/core/libpeas/src.nix deleted file mode 100644 index 6f2cd82fb215..000000000000 --- a/pkgs/desktops/gnome-3/core/libpeas/src.nix +++ /dev/null @@ -1,13 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: rec { - major = "1.22"; - minor = "0"; - version = "${major}.${minor}"; - name = "libpeas-${version}"; - - src = fetchurl { - url = "mirror://gnome/sources/libpeas/${major}/${name}.tar.xz"; - sha256 = "0qm908kisyjzjxvygdl18hjqxvvgkq9w0phs2g55pck277sw0bsv"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/libzapojit/default.nix b/pkgs/desktops/gnome-3/core/libzapojit/default.nix index dab1a0fea8a0..8bd9e11d95f3 100644 --- a/pkgs/desktops/gnome-3/core/libzapojit/default.nix +++ b/pkgs/desktops/gnome-3/core/libzapojit/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, glib, intltool, json_glib, rest, libsoup, gtk, gnome_online_accounts }: +{ stdenv, fetchurl, pkgconfig, glib, intltool, json-glib, rest, libsoup, gtk, gnome-online-accounts }: stdenv.mkDerivation rec { name = "libzapojit-0.0.3"; @@ -9,7 +9,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ glib intltool json_glib rest libsoup gtk gnome_online_accounts ]; + buildInputs = [ glib intltool json-glib rest libsoup gtk gnome-online-accounts ]; meta = with stdenv.lib; { description = "GObject wrapper for the SkyDrive and Hotmail REST APIs"; diff --git a/pkgs/desktops/gnome-3/core/mutter/default.nix b/pkgs/desktops/gnome-3/core/mutter/default.nix index e1343d9977d7..dc89c8c674ab 100644 --- a/pkgs/desktops/gnome-3/core/mutter/default.nix +++ b/pkgs/desktops/gnome-3/core/mutter/default.nix @@ -1,10 +1,20 @@ { fetchurl, stdenv, pkgconfig, gnome3, intltool, gobjectIntrospection, upower, cairo -, pango, cogl, clutter, libstartup_notification, zenity, libcanberra_gtk3 +, pango, cogl, clutter, libstartup_notification, zenity, libcanberra-gtk3 , libtool, makeWrapper, xkeyboard_config, libxkbfile, libxkbcommon, libXtst, libinput , pipewire, libgudev, libwacom, xwayland, autoreconfHook }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "mutter-${version}"; + version = "3.26.2"; + + src = fetchurl { + url = "mirror://gnome/sources/mutter/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "83309feb05a4635c47713665c0592af8ab6d7f17a36e4bd626d67609b6422fab"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "mutter"; attrPath = "gnome3.mutter"; }; + }; configureFlags = [ "--with-x" @@ -36,10 +46,10 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ autoreconfHook pkgconfig intltool libtool makeWrapper ]; buildInputs = with gnome3; [ - glib gobjectIntrospection gtk gsettings_desktop_schemas upower - gnome_desktop cairo pango cogl clutter zenity libstartup_notification - gnome3.geocode_glib libinput libgudev libwacom - libcanberra_gtk3 zenity xkeyboard_config libxkbfile + glib gobjectIntrospection gtk gsettings-desktop-schemas upower + gnome-desktop cairo pango cogl clutter zenity libstartup_notification + gnome3.geocode-glib libinput libgudev libwacom + libcanberra-gtk3 zenity xkeyboard_config libxkbfile libxkbcommon pipewire ]; diff --git a/pkgs/desktops/gnome-3/core/mutter/src.nix b/pkgs/desktops/gnome-3/core/mutter/src.nix deleted file mode 100644 index b3d0841a2e5c..000000000000 --- a/pkgs/desktops/gnome-3/core/mutter/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "mutter-3.26.2"; - - src = fetchurl { - url = mirror://gnome/sources/mutter/3.26/mutter-3.26.2.tar.xz; - sha256 = "83309feb05a4635c47713665c0592af8ab6d7f17a36e4bd626d67609b6422fab"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/nautilus/default.nix b/pkgs/desktops/gnome-3/core/nautilus/default.nix index 0a7cd139d2cc..8ed7bb2f01a0 100644 --- a/pkgs/desktops/gnome-3/core/nautilus/default.nix +++ b/pkgs/desktops/gnome-3/core/nautilus/default.nix @@ -1,15 +1,25 @@ -{ stdenv, fetchurl, meson, ninja, pkgconfig, gettext, libxml2, desktop_file_utils, wrapGAppsHook -, gtk, gnome3, gnome-autoar, glib, dbus_glib, shared_mime_info, libnotify, libexif +{ stdenv, fetchurl, meson, ninja, pkgconfig, gettext, libxml2, desktop-file-utils, wrapGAppsHook +, gtk, gnome3, gnome-autoar, glib, dbus-glib, shared-mime-info, libnotify, libexif , exempi, librsvg, tracker, tracker-miners, libselinux, gdk_pixbuf }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "nautilus-${version}"; + version = "3.26.2"; - nativeBuildInputs = [ meson ninja pkgconfig libxml2 gettext wrapGAppsHook desktop_file_utils ]; + src = fetchurl { + url = "mirror://gnome/sources/nautilus/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "79c99404c665ea76b3db86f261fbd28a62b54c51429b05c3314462c9de2614b4"; + }; - buildInputs = [ dbus_glib shared_mime_info libexif gtk exempi libnotify libselinux - tracker tracker-miners gnome3.gnome_desktop gnome3.adwaita-icon-theme - gnome3.gsettings_desktop_schemas ]; + passthru = { + updateScript = gnome3.updateScript { packageName = "nautilus"; attrPath = "gnome3.nautilus"; }; + }; + + nativeBuildInputs = [ meson ninja pkgconfig libxml2 gettext wrapGAppsHook desktop-file-utils ]; + + buildInputs = [ dbus-glib shared-mime-info libexif gtk exempi libnotify libselinux + tracker tracker-miners gnome3.gnome-desktop gnome3.adwaita-icon-theme + gnome3.gsettings-desktop-schemas ]; propagatedBuildInputs = [ gnome-autoar ]; @@ -21,6 +31,7 @@ stdenv.mkDerivation rec { # Thumbnailers --prefix XDG_DATA_DIRS : "${gdk_pixbuf}/share" --prefix XDG_DATA_DIRS : "${librsvg}/share" + --prefix XDG_DATA_DIRS : "${shared-mime-info}/share" ) ''; diff --git a/pkgs/desktops/gnome-3/core/nautilus/src.nix b/pkgs/desktops/gnome-3/core/nautilus/src.nix deleted file mode 100644 index 1cc14391e394..000000000000 --- a/pkgs/desktops/gnome-3/core/nautilus/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "nautilus-3.26.2"; - - src = fetchurl { - url = mirror://gnome/sources/nautilus/3.26/nautilus-3.26.2.tar.xz; - sha256 = "79c99404c665ea76b3db86f261fbd28a62b54c51429b05c3314462c9de2614b4"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/simple-scan/default.nix b/pkgs/desktops/gnome-3/core/simple-scan/default.nix index e4213b240a28..f982af2d56db 100644 --- a/pkgs/desktops/gnome-3/core/simple-scan/default.nix +++ b/pkgs/desktops/gnome-3/core/simple-scan/default.nix @@ -3,7 +3,17 @@ , libxml2, sane-backends, vala, gnome3, gobjectIntrospection }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "simple-scan-${version}"; + version = "3.26.2"; + + src = fetchurl { + url = "mirror://gnome/sources/simple-scan/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "d172825b1b77e2e32c21fc847fd670c4711a504b09688f8567a98ac9516fe212"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "simple-scan"; }; + }; buildInputs = [ cairo gdk_pixbuf colord glib gnome3.defaultIconTheme gusb gtk libwebp packagekit sane-backends vala ]; @@ -51,6 +61,7 @@ stdenv.mkDerivation rec { ''; homepage = https://launchpad.net/simple-scan; license = licenses.gpl3Plus; + maintainers = gnome3.maintainers; platforms = platforms.linux; }; } diff --git a/pkgs/desktops/gnome-3/core/simple-scan/src.nix b/pkgs/desktops/gnome-3/core/simple-scan/src.nix deleted file mode 100644 index fb430db7d844..000000000000 --- a/pkgs/desktops/gnome-3/core/simple-scan/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "simple-scan-3.26.2"; - - src = fetchurl { - url = mirror://gnome/sources/simple-scan/3.26/simple-scan-3.26.2.tar.xz; - sha256 = "d172825b1b77e2e32c21fc847fd670c4711a504b09688f8567a98ac9516fe212"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/sushi/default.nix b/pkgs/desktops/gnome-3/core/sushi/default.nix index 37b311256bd9..00cec2f93b9f 100644 --- a/pkgs/desktops/gnome-3/core/sushi/default.nix +++ b/pkgs/desktops/gnome-3/core/sushi/default.nix @@ -1,16 +1,26 @@ { stdenv, fetchurl, pkgconfig, file, intltool, gobjectIntrospection, glib -, clutter_gtk, clutter-gst, gnome3, gtksourceview, libmusicbrainz +, clutter-gtk, clutter-gst, gnome3, gtksourceview, libmusicbrainz , webkitgtk, libmusicbrainz5, icu, makeWrapper, gst_all_1 , gdk_pixbuf, librsvg, gtk3, harfbuzz }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "sushi-${version}"; + version = "3.24.0"; + + src = fetchurl { + url = "mirror://gnome/sources/sushi/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "f90bb95172664486f8d529995007fd12f0df9d0c998e20658b6203f46ce70d48"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "sushi"; attrPath = "gnome3.sushi"; }; + }; propagatedUserEnvPkgs = [ gst_all_1.gstreamer gst_all_1.gst-plugins-base gst_all_1.gst-plugins-good ]; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ file intltool gobjectIntrospection glib gtk3 - clutter_gtk clutter-gst gnome3.gjs gtksourceview gdk_pixbuf + clutter-gtk clutter-gst gnome3.gjs gtksourceview gdk_pixbuf librsvg gnome3.defaultIconTheme libmusicbrainz5 webkitgtk gnome3.evince icu makeWrapper harfbuzz ]; diff --git a/pkgs/desktops/gnome-3/core/sushi/src.nix b/pkgs/desktops/gnome-3/core/sushi/src.nix deleted file mode 100644 index a713aef6f7f0..000000000000 --- a/pkgs/desktops/gnome-3/core/sushi/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "sushi-3.24.0"; - - src = fetchurl { - url = mirror://gnome/sources/sushi/3.24/sushi-3.24.0.tar.xz; - sha256 = "f90bb95172664486f8d529995007fd12f0df9d0c998e20658b6203f46ce70d48"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/totem-pl-parser/default.nix b/pkgs/desktops/gnome-3/core/totem-pl-parser/default.nix index c763621564c7..ef6bc97b1c67 100644 --- a/pkgs/desktops/gnome-3/core/totem-pl-parser/default.nix +++ b/pkgs/desktops/gnome-3/core/totem-pl-parser/default.nix @@ -1,7 +1,17 @@ { stdenv, fetchurl, meson, ninja, pkgconfig, gettext, gmime, libxml2, libsoup, gnome3 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "totem-pl-parser-${version}"; + version = "3.26.0"; + + src = fetchurl { + url = "mirror://gnome/sources/totem-pl-parser/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "f153a53391e9b42fed5cb6ce62322a58e323fde6ec4a54d8ba4d376cf4c1fbcb"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "totem-pl-parser"; attrPath = "gnome3.totem-pl-parser"; }; + }; nativeBuildInputs = [ meson ninja pkgconfig gettext ]; buildInputs = [ gmime libxml2 libsoup ]; diff --git a/pkgs/desktops/gnome-3/core/totem-pl-parser/src.nix b/pkgs/desktops/gnome-3/core/totem-pl-parser/src.nix deleted file mode 100644 index 2935111df27d..000000000000 --- a/pkgs/desktops/gnome-3/core/totem-pl-parser/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "totem-pl-parser-3.26.0"; - - src = fetchurl { - url = mirror://gnome/sources/totem-pl-parser/3.26/totem-pl-parser-3.26.0.tar.xz; - sha256 = "f153a53391e9b42fed5cb6ce62322a58e323fde6ec4a54d8ba4d376cf4c1fbcb"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/totem/default.nix b/pkgs/desktops/gnome-3/core/totem/default.nix index c26b9b45dfdf..a9d8b2ad11cb 100644 --- a/pkgs/desktops/gnome-3/core/totem/default.nix +++ b/pkgs/desktops/gnome-3/core/totem/default.nix @@ -1,11 +1,21 @@ { stdenv, fetchurl, meson, ninja, intltool, gst_all_1, clutter -, clutter_gtk, clutter-gst, python3Packages, shared_mime_info +, clutter-gtk, clutter-gst, python3Packages, shared-mime-info , pkgconfig, gtk3, glib, gobjectIntrospection -, bash, wrapGAppsHook, itstool, libxml2, dbus_glib, vala, gnome3, librsvg +, bash, wrapGAppsHook, itstool, libxml2, dbus-glib, vala, gnome3, librsvg , gdk_pixbuf, file, tracker, nautilus }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "totem-${version}"; + version = "3.26.0"; + + src = fetchurl { + url = "mirror://gnome/sources/totem/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "e32fb9a68097045e75c87ad1b8177f5c01aea2a13dcb3b2e71a0f9570fe9ee13"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "totem"; attrPath = "gnome3.totem"; }; + }; doCheck = true; @@ -16,14 +26,14 @@ stdenv.mkDerivation rec { NIX_CFLAGS_COMPILE = "-I${gnome3.glib.dev}/include/gio-unix-2.0"; - propagatedUserEnvPkgs = [ gnome3.gnome_themes_standard ]; + propagatedUserEnvPkgs = [ gnome3.gnome-themes-standard ]; nativeBuildInputs = [ meson ninja vala pkgconfig intltool python3Packages.python itstool file wrapGAppsHook ]; - buildInputs = [ gtk3 glib gnome3.grilo clutter_gtk clutter-gst gnome3.totem-pl-parser gnome3.grilo-plugins + buildInputs = [ gtk3 glib gnome3.grilo clutter-gtk clutter-gst gnome3.totem-pl-parser gnome3.grilo-plugins gst_all_1.gstreamer gst_all_1.gst-plugins-base gst_all_1.gst-plugins-good gst_all_1.gst-plugins-bad - gst_all_1.gst-plugins-ugly gst_all_1.gst-libav gnome3.libpeas shared_mime_info dbus_glib - gdk_pixbuf libxml2 gnome3.defaultIconTheme gnome3.gnome_desktop - gnome3.gsettings_desktop_schemas tracker nautilus ]; + gst_all_1.gst-plugins-ugly gst_all_1.gst-libav gnome3.libpeas shared-mime-info dbus-glib + gdk_pixbuf libxml2 gnome3.defaultIconTheme gnome3.gnome-desktop + gnome3.gsettings-desktop-schemas tracker nautilus ]; propagatedBuildInputs = [ gobjectIntrospection python3Packages.pylint python3Packages.pygobject2 ]; diff --git a/pkgs/desktops/gnome-3/core/totem/src.nix b/pkgs/desktops/gnome-3/core/totem/src.nix deleted file mode 100644 index e051b13dee8d..000000000000 --- a/pkgs/desktops/gnome-3/core/totem/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "totem-3.26.0"; - - src = fetchurl { - url = mirror://gnome/sources/totem/3.26/totem-3.26.0.tar.xz; - sha256 = "e32fb9a68097045e75c87ad1b8177f5c01aea2a13dcb3b2e71a0f9570fe9ee13"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/tracker-miners/default.nix b/pkgs/desktops/gnome-3/core/tracker-miners/default.nix index baff249a03a3..6cb3aa39c214 100644 --- a/pkgs/desktops/gnome-3/core/tracker-miners/default.nix +++ b/pkgs/desktops/gnome-3/core/tracker-miners/default.nix @@ -2,15 +2,25 @@ , pkgconfig, gtk3, glib , bash, wrapGAppsHook, itstool, vala, sqlite, libxslt , gnome3, librsvg, gdk_pixbuf, libnotify -, evolution_data_server, gst_all_1, poppler +, evolution-data-server, gst_all_1, poppler , icu, taglib, libjpeg, libtiff, giflib, libcue , libvorbis, flac, exempi, networkmanager , libpng, libexif, libgsf, libuuid, bzip2 -, libsoup, json_glib, libseccomp +, libsoup, json-glib, libseccomp , libiptcdata }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "tracker-miners-${version}"; + version = "2.0.3"; + + src = fetchurl { + url = "mirror://gnome/sources/tracker-miners/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "12413a9f8dfa705a48a2697dcbb3eef12ee91bb98f392a23ba4bda7813e41d1b"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "tracker-miners"; attrPath = "gnome3.tracker-miners"; }; + }; NIX_CFLAGS_COMPILE = "-I${poppler.dev}/include/poppler"; @@ -19,9 +29,9 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ vala pkgconfig intltool itstool libxslt wrapGAppsHook ]; # TODO: add libgrss, libenca buildInputs = [ - bzip2 evolution_data_server exempi flac giflib glib gnome3.totem-pl-parser + bzip2 evolution-data-server exempi flac giflib glib gnome3.totem-pl-parser gnome3.tracker gst_all_1.gst-plugins-base gst_all_1.gstreamer icu - json_glib libcue libexif libgsf libiptcdata libjpeg libpng libseccomp libsoup + json-glib libcue libexif libgsf libiptcdata libjpeg libpng libseccomp libsoup libtiff libuuid libvorbis libxml2 poppler taglib upower ]; diff --git a/pkgs/desktops/gnome-3/core/tracker-miners/src.nix b/pkgs/desktops/gnome-3/core/tracker-miners/src.nix deleted file mode 100644 index 1c5ee9b35fa1..000000000000 --- a/pkgs/desktops/gnome-3/core/tracker-miners/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "tracker-miners-2.0.3"; - - src = fetchurl { - url = mirror://gnome/sources/tracker-miners/2.0/tracker-miners-2.0.3.tar.xz; - sha256 = "12413a9f8dfa705a48a2697dcbb3eef12ee91bb98f392a23ba4bda7813e41d1b"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/tracker/default.nix b/pkgs/desktops/gnome-3/core/tracker/default.nix index 59455f320b53..f75de96669d2 100644 --- a/pkgs/desktops/gnome-3/core/tracker/default.nix +++ b/pkgs/desktops/gnome-3/core/tracker/default.nix @@ -1,19 +1,29 @@ { stdenv, fetchurl, intltool, pkgconfig , libxml2, upower, glib, wrapGAppsHook, vala, sqlite, libxslt -, gnome3, icu, libuuid, networkmanager, libsoup, json_glib }: +, gnome3, icu, libuuid, networkmanager, libsoup, json-glib }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "tracker-${version}"; + version = "2.0.2"; + + src = fetchurl { + url = "mirror://gnome/sources/tracker/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "ece71a56c29151a76fc1b6e43c15dd1b657b37162dc948fa2487faf5ddb47fda"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "tracker"; attrPath = "gnome3.tracker"; }; + }; enableParallelBuilding = true; nativeBuildInputs = [ vala pkgconfig intltool libxslt wrapGAppsHook ]; # TODO: add libstemmer buildInputs = [ - glib libxml2 sqlite upower icu networkmanager libsoup libuuid json_glib + glib libxml2 sqlite upower icu networkmanager libsoup libuuid json-glib ]; - # TODO: figure out wrapping unit tests, some of them fail on missing gsettings_desktop_schemas + # TODO: figure out wrapping unit tests, some of them fail on missing gsettings-desktop-schemas configureFlags = [ "--disable-unit-tests" ]; postPatch = '' diff --git a/pkgs/desktops/gnome-3/core/tracker/src.nix b/pkgs/desktops/gnome-3/core/tracker/src.nix deleted file mode 100644 index 887ae9a865a9..000000000000 --- a/pkgs/desktops/gnome-3/core/tracker/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "tracker-2.0.2"; - - src = fetchurl { - url = mirror://gnome/sources/tracker/2.0/tracker-2.0.2.tar.xz; - sha256 = "ece71a56c29151a76fc1b6e43c15dd1b657b37162dc948fa2487faf5ddb47fda"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/vino/default.nix b/pkgs/desktops/gnome-3/core/vino/default.nix index bd446623fc25..4365451636ae 100644 --- a/pkgs/desktops/gnome-3/core/vino/default.nix +++ b/pkgs/desktops/gnome-3/core/vino/default.nix @@ -1,24 +1,34 @@ { stdenv, fetchurl, lib, wrapGAppsHook , pkgconfig, gnome3, gtk3, glib, intltool, libXtst, libnotify, libsoup -, telepathySupport ? false, dbus_glib ? null, telepathy_glib ? null +, telepathySupport ? false, dbus-glib ? null, telepathy-glib ? null , libsecret ? null, gnutls ? null, libgcrypt ? null, avahi ? null , zlib ? null, libjpeg ? null , libXdamage ? null, libXfixes ? null, libXext ? null -, gnomeKeyringSupport ? false, libgnome_keyring3 ? null +, gnomeKeyringSupport ? false, libgnome-keyring3 ? null , networkmanager ? null }: with lib; stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "vino-${version}"; + version = "3.22.0"; + + src = fetchurl { + url = "mirror://gnome/sources/vino/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "2911c779b6a2c46e5bc8e5a0c94c2a4d5bd4a1ee7e35f2818702cb13d9d23bab"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "vino"; attrPath = "gnome3.vino"; }; + }; doCheck = true; buildInputs = [ wrapGAppsHook pkgconfig gnome3.defaultIconTheme gtk3 glib intltool libXtst libnotify libsoup - ] ++ optionals telepathySupport [ dbus_glib telepathy_glib ] - ++ optional gnomeKeyringSupport libgnome_keyring3 + ] ++ optionals telepathySupport [ dbus-glib telepathy-glib ] + ++ optional gnomeKeyringSupport libgnome-keyring3 ++ filter (p: p != null) [ libsecret gnutls libgcrypt avahi zlib libjpeg libXdamage libXfixes libXext networkmanager diff --git a/pkgs/desktops/gnome-3/core/vino/src.nix b/pkgs/desktops/gnome-3/core/vino/src.nix deleted file mode 100644 index 8cf55272da97..000000000000 --- a/pkgs/desktops/gnome-3/core/vino/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "vino-3.22.0"; - - src = fetchurl { - url = mirror://gnome/sources/vino/3.22/vino-3.22.0.tar.xz; - sha256 = "2911c779b6a2c46e5bc8e5a0c94c2a4d5bd4a1ee7e35f2818702cb13d9d23bab"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/vte/default.nix b/pkgs/desktops/gnome-3/core/vte/default.nix index 251e27334b11..4abeb2ba9618 100644 --- a/pkgs/desktops/gnome-3/core/vte/default.nix +++ b/pkgs/desktops/gnome-3/core/vte/default.nix @@ -1,10 +1,20 @@ { stdenv, fetchurl, intltool, pkgconfig , gnome3, ncurses, gobjectIntrospection, vala, libxml2, gnutls -, fetchFromGitHub, autoconf, automake, libtool, gtk_doc, gperf, pcre2 +, fetchFromGitHub, autoconf, automake, libtool, gtk-doc, gperf, pcre2 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "vte-${version}"; + version = "0.50.2"; + + src = fetchurl { + url = "mirror://gnome/sources/vte/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "79dd316bfaff48f2fb74d066baae0d830e1f44436796fe410a57297e5c5f09cf"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "vte"; attrPath = "gnome3.vte"; }; + }; nativeBuildInputs = [ gobjectIntrospection intltool pkgconfig vala gperf libxml2 ]; buildInputs = [ gnome3.glib gnome3.gtk3 ncurses ]; diff --git a/pkgs/desktops/gnome-3/core/vte/ng.nix b/pkgs/desktops/gnome-3/core/vte/ng.nix index c40972e955fa..e6dc005fe58e 100644 --- a/pkgs/desktops/gnome-3/core/vte/ng.nix +++ b/pkgs/desktops/gnome-3/core/vte/ng.nix @@ -1,4 +1,4 @@ -{ gnome3, fetchFromGitHub, autoconf, automake, gtk_doc, gettext, libtool, gperf }: +{ gnome3, fetchFromGitHub, autoconf, automake, gtk-doc, gettext, libtool, gperf }: gnome3.vte.overrideAttrs (oldAttrs: rec { name = "vte-ng-${version}"; @@ -14,5 +14,5 @@ gnome3.vte.overrideAttrs (oldAttrs: rec { preConfigure = oldAttrs.preConfigure + "; NOCONFIGURE=1 ./autogen.sh"; nativeBuildInputs = oldAttrs.nativeBuildInputs or [] - ++ [ gtk_doc autoconf automake gettext libtool gperf ]; + ++ [ gtk-doc autoconf automake gettext libtool gperf ]; }) diff --git a/pkgs/desktops/gnome-3/core/vte/src.nix b/pkgs/desktops/gnome-3/core/vte/src.nix deleted file mode 100644 index c63873767dc4..000000000000 --- a/pkgs/desktops/gnome-3/core/vte/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "vte-0.50.2"; - - src = fetchurl { - url = mirror://gnome/sources/vte/0.50/vte-0.50.2.tar.xz; - sha256 = "79dd316bfaff48f2fb74d066baae0d830e1f44436796fe410a57297e5c5f09cf"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/yelp-tools/default.nix b/pkgs/desktops/gnome-3/core/yelp-tools/default.nix index eaceadcc85c4..28e89cad9fb8 100644 --- a/pkgs/desktops/gnome-3/core/yelp-tools/default.nix +++ b/pkgs/desktops/gnome-3/core/yelp-tools/default.nix @@ -1,10 +1,20 @@ { stdenv, fetchurl, libxml2, libxslt, itstool, gnome3, pkgconfig }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "yelp-tools-${version}"; + version = "3.18.0"; + + src = fetchurl { + url = "mirror://gnome/sources/yelp-tools/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "c6c1d65f802397267cdc47aafd5398c4b60766e0a7ad2190426af6c0d0716932"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "yelp-tools"; attrPath = "gnome3.yelp-tools"; }; + }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ libxml2 libxslt itstool gnome3.yelp_xsl ]; + buildInputs = [ libxml2 libxslt itstool gnome3.yelp-xsl ]; doCheck = true; diff --git a/pkgs/desktops/gnome-3/core/yelp-tools/src.nix b/pkgs/desktops/gnome-3/core/yelp-tools/src.nix deleted file mode 100644 index f03c6d1bc311..000000000000 --- a/pkgs/desktops/gnome-3/core/yelp-tools/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "yelp-tools-3.18.0"; - - src = fetchurl { - url = mirror://gnome/sources/yelp-tools/3.18/yelp-tools-3.18.0.tar.xz; - sha256 = "c6c1d65f802397267cdc47aafd5398c4b60766e0a7ad2190426af6c0d0716932"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/yelp-xsl/default.nix b/pkgs/desktops/gnome-3/core/yelp-xsl/default.nix index 353b9ccb55e3..341a7d7582ca 100644 --- a/pkgs/desktops/gnome-3/core/yelp-xsl/default.nix +++ b/pkgs/desktops/gnome-3/core/yelp-xsl/default.nix @@ -2,7 +2,17 @@ , itstool, libxml2, libxslt, gnome3 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "yelp-xsl-${version}"; + version = "3.20.1"; + + src = fetchurl { + url = "mirror://gnome/sources/yelp-xsl/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "dc61849e5dca473573d32e28c6c4e3cf9c1b6afe241f8c26e29539c415f97ba0"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "yelp-xsl"; attrPath = "gnome3.yelp-xsl"; }; + }; doCheck = true; diff --git a/pkgs/desktops/gnome-3/core/yelp-xsl/src.nix b/pkgs/desktops/gnome-3/core/yelp-xsl/src.nix deleted file mode 100644 index de5d68d1fab1..000000000000 --- a/pkgs/desktops/gnome-3/core/yelp-xsl/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "yelp-xsl-3.20.1"; - - src = fetchurl { - url = mirror://gnome/sources/yelp-xsl/3.20/yelp-xsl-3.20.1.tar.xz; - sha256 = "dc61849e5dca473573d32e28c6c4e3cf9c1b6afe241f8c26e29539c415f97ba0"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/yelp/default.nix b/pkgs/desktops/gnome-3/core/yelp/default.nix index 6b458598c299..661ddc1f12f4 100644 --- a/pkgs/desktops/gnome-3/core/yelp/default.nix +++ b/pkgs/desktops/gnome-3/core/yelp/default.nix @@ -4,17 +4,27 @@ , wrapGAppsHook }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "yelp-${version}"; + version = "3.26.0"; - propagatedUserEnvPkgs = [ gnome3.gnome_themes_standard ]; + src = fetchurl { + url = "mirror://gnome/sources/yelp/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "e4cb02ed2f44cfec3c352c957f8a461d9689cbc06eb3b503a58ffe92e1753f1b"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "yelp"; }; + }; + + propagatedUserEnvPkgs = [ gnome3.gnome-themes-standard ]; preConfigure = "substituteInPlace ./configure --replace /usr/bin/file ${file}/bin/file"; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ gtk3 glib webkitgtk intltool itstool sqlite - libxml2 libxslt icu file makeWrapper gnome3.yelp_xsl + libxml2 libxslt icu file makeWrapper gnome3.yelp-xsl librsvg gdk_pixbuf gnome3.defaultIconTheme groff - gnome3.gsettings_desktop_schemas wrapGAppsHook + gnome3.gsettings-desktop-schemas wrapGAppsHook gst_all_1.gst-plugins-base gst_all_1.gst-plugins-good ]; meta = with stdenv.lib; { diff --git a/pkgs/desktops/gnome-3/core/yelp/src.nix b/pkgs/desktops/gnome-3/core/yelp/src.nix deleted file mode 100644 index dd06a6bf1ebb..000000000000 --- a/pkgs/desktops/gnome-3/core/yelp/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "yelp-3.26.0"; - - src = fetchurl { - url = mirror://gnome/sources/yelp/3.26/yelp-3.26.0.tar.xz; - sha256 = "e4cb02ed2f44cfec3c352c957f8a461d9689cbc06eb3b503a58ffe92e1753f1b"; - }; -} diff --git a/pkgs/desktops/gnome-3/core/zenity/default.nix b/pkgs/desktops/gnome-3/core/zenity/default.nix index 80f2dde534ec..fd55fd9f87a6 100644 --- a/pkgs/desktops/gnome-3/core/zenity/default.nix +++ b/pkgs/desktops/gnome-3/core/zenity/default.nix @@ -1,8 +1,18 @@ { stdenv, fetchurl, pkgconfig, cairo, libxml2, libxslt, gnome3, pango -, gnome_doc_utils, intltool, libX11, which, itstool, wrapGAppsHook }: +, gnome-doc-utils, intltool, libX11, which, itstool, wrapGAppsHook }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "zenity-${version}"; + version = "3.26.0"; + + src = fetchurl { + url = "mirror://gnome/sources/zenity/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "6a7f34626dd62b751fe22bcdb32f3558f8a8fdddcc9406893dd264f0ac18e830"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "zenity"; attrPath = "gnome3.zenity"; }; + }; preBuild = '' mkdir -p $out/include @@ -10,7 +20,7 @@ stdenv.mkDerivation rec { buildInputs = [ gnome3.gtk libxml2 libxslt libX11 itstool ]; - nativeBuildInputs = [ pkgconfig intltool gnome_doc_utils which wrapGAppsHook ]; + nativeBuildInputs = [ pkgconfig intltool gnome-doc-utils which wrapGAppsHook ]; meta = with stdenv.lib; { platforms = platforms.linux; diff --git a/pkgs/desktops/gnome-3/core/zenity/src.nix b/pkgs/desktops/gnome-3/core/zenity/src.nix deleted file mode 100644 index ad0ce2f4d733..000000000000 --- a/pkgs/desktops/gnome-3/core/zenity/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "zenity-3.26.0"; - - src = fetchurl { - url = mirror://gnome/sources/zenity/3.26/zenity-3.26.0.tar.xz; - sha256 = "6a7f34626dd62b751fe22bcdb32f3558f8a8fdddcc9406893dd264f0ac18e830"; - }; -} diff --git a/pkgs/desktops/gnome-3/default.nix b/pkgs/desktops/gnome-3/default.nix index 0650ddf04eae..80e9058bfb1c 100644 --- a/pkgs/desktops/gnome-3/default.nix +++ b/pkgs/desktops/gnome-3/default.nix @@ -1,4 +1,4 @@ -{ pkgs }: +{ pkgs, lib }: let @@ -13,25 +13,31 @@ let callPackage = pkgs.newScope self; + # Convert a version to branch (3.26.18 → 3.26) + # Used for finding packages on GNOME mirrors + versionBranch = version: builtins.concatStringsSep "." (lib.take 2 (lib.splitString "." version)); + + updateScript = callPackage ./update.nix { }; + version = "3.26"; maintainers = with pkgs.lib.maintainers; [ lethalman jtojnar ]; corePackages = with gnome3; [ - pkgs.desktop_file_utils pkgs.ibus - pkgs.shared_mime_info # for update-mime-database + pkgs.desktop-file-utils pkgs.ibus + pkgs.shared-mime-info # for update-mime-database glib # for gsettings gtk3.out # for gtk-update-icon-cache - glib_networking gvfs dconf gnome-backgrounds gnome_control_center - gnome-menus gnome_settings_daemon gnome_shell - gnome_themes_standard defaultIconTheme gnome-shell-extensions - pkgs.hicolor_icon_theme + glib-networking gvfs dconf gnome-backgrounds gnome-control-center + gnome-menus gnome-settings-daemon gnome-shell + gnome-themes-standard defaultIconTheme gnome-shell-extensions + pkgs.hicolor-icon-theme ]; optionalPackages = with gnome3; [ baobab eog epiphany evince gucharmap nautilus totem vino yelp gnome-bluetooth gnome-calculator gnome-contacts gnome-font-viewer gnome-screenshot gnome-system-log gnome-system-monitor simple-scan - gnome_terminal gnome-user-docs evolution file-roller gedit + gnome-terminal gnome-user-docs evolution file-roller gedit gnome-clocks gnome-music gnome-tweak-tool gnome-photos nautilus-sendto dconf-editor vinagre gnome-weather gnome-logs gnome-maps gnome-characters gnome-calendar accerciser gnome-nettool @@ -46,8 +52,8 @@ let hitori gnome-taquin ]; - inherit (pkgs) glib gtk2 webkitgtk gtk3 gtkmm3 libcanberra_gtk2 - clutter clutter-gst clutter_gtk cogl gtkvnc; + inherit (pkgs) glib gtk2 webkitgtk gtk3 gtkmm3 libcanberra-gtk2 + clutter clutter-gst clutter-gtk cogl gtkvnc; inherit (pkgs.gnome2) ORBit2; libsoup = pkgs.libsoup.override { gnomeSupport = true; }; libchamplain = pkgs.libchamplain.override { libsoup = libsoup; }; @@ -81,11 +87,11 @@ let evince = callPackage ./core/evince { }; # ToDo: dbus would prevent compilation, enable tests - evolution_data_server = callPackage ./core/evolution-data-server { }; + evolution-data-server = callPackage ./core/evolution-data-server { }; gconf = callPackage ./core/gconf { }; - geocode_glib = callPackage ./core/geocode-glib { }; + geocode-glib = callPackage ./core/geocode-glib { }; gcr = callPackage ./core/gcr { }; # ToDo: tests fail @@ -93,8 +99,8 @@ let gjs = callPackage ./core/gjs { }; - glib_networking = pkgs.glib_networking.override { - inherit gsettings_desktop_schemas; + glib-networking = pkgs.glib-networking.override { + inherit gsettings-desktop-schemas; }; gnome-backgrounds = callPackage ./core/gnome-backgrounds { }; @@ -103,13 +109,13 @@ let gnome-contacts = callPackage ./core/gnome-contacts { }; - gnome_control_center = callPackage ./core/gnome-control-center { }; + gnome-control-center = callPackage ./core/gnome-control-center { }; gnome-calculator = callPackage ./core/gnome-calculator { }; - gnome_common = callPackage ./core/gnome-common { }; + gnome-common = callPackage ./core/gnome-common { }; - gnome_desktop = callPackage ./core/gnome-desktop { }; + gnome-desktop = callPackage ./core/gnome-desktop { }; gnome-dictionary = callPackage ./core/gnome-dictionary { }; @@ -119,27 +125,27 @@ let gnome-menus = callPackage ./core/gnome-menus { }; - gnome_keyring = callPackage ./core/gnome-keyring { }; + gnome-keyring = callPackage ./core/gnome-keyring { }; - libgnome_keyring = callPackage ./core/libgnome-keyring { }; + libgnome-keyring = callPackage ./core/libgnome-keyring { }; libgnomekbd = callPackage ./core/libgnomekbd { }; folks = callPackage ./core/folks { }; - gnome_online_accounts = callPackage ./core/gnome-online-accounts { }; + gnome-online-accounts = callPackage ./core/gnome-online-accounts { }; gnome-online-miners = callPackage ./core/gnome-online-miners { }; - gnome_session = callPackage ./core/gnome-session { }; + gnome-session = callPackage ./core/gnome-session { }; - gnome_shell = callPackage ./core/gnome-shell { }; + gnome-shell = callPackage ./core/gnome-shell { }; gnome-shell-extensions = callPackage ./core/gnome-shell-extensions { }; gnome-screenshot = callPackage ./core/gnome-screenshot { }; - gnome_settings_daemon = callPackage ./core/gnome-settings-daemon { }; + gnome-settings-daemon = callPackage ./core/gnome-settings-daemon { }; gnome-software = callPackage ./core/gnome-software { }; @@ -147,9 +153,9 @@ let gnome-system-monitor = callPackage ./core/gnome-system-monitor { }; - gnome_terminal = callPackage ./core/gnome-terminal { }; + gnome-terminal = callPackage ./core/gnome-terminal { }; - gnome_themes_standard = callPackage ./core/gnome-themes-standard { }; + gnome-themes-standard = callPackage ./core/gnome-themes-standard { }; gnome-user-docs = callPackage ./core/gnome-user-docs { }; @@ -159,7 +165,7 @@ let grilo-plugins = callPackage ./core/grilo-plugins { }; - gsettings_desktop_schemas = callPackage ./core/gsettings-desktop-schemas { }; + gsettings-desktop-schemas = callPackage ./core/gsettings-desktop-schemas { }; gsound = callPackage ./core/gsound { }; @@ -193,36 +199,36 @@ let nautilus = callPackage ./core/nautilus { }; - networkmanager_openvpn = pkgs.networkmanager_openvpn.override { + networkmanager-openvpn = pkgs.networkmanager-openvpn.override { inherit gnome3; }; - networkmanager_pptp = pkgs.networkmanager_pptp.override { + networkmanager-pptp = pkgs.networkmanager-pptp.override { inherit gnome3; }; - networkmanager_vpnc = pkgs.networkmanager_vpnc.override { + networkmanager-vpnc = pkgs.networkmanager-vpnc.override { inherit gnome3; }; - networkmanager_openconnect = pkgs.networkmanager_openconnect.override { + networkmanager-openconnect = pkgs.networkmanager-openconnect.override { inherit gnome3; }; - networkmanager_fortisslvpn = pkgs.networkmanager_fortisslvpn.override { + networkmanager-fortisslvpn = pkgs.networkmanager-fortisslvpn.override { inherit gnome3; }; - networkmanager_l2tp = pkgs.networkmanager_l2tp.override { + networkmanager-l2tp = pkgs.networkmanager-l2tp.override { inherit gnome3; }; - networkmanager_iodine = pkgs.networkmanager_iodine.override { + networkmanager-iodine = pkgs.networkmanager-iodine.override { inherit gnome3; }; networkmanagerapplet = pkgs.networkmanagerapplet.override { - inherit gnome3 gsettings_desktop_schemas glib_networking; + inherit gnome3 gsettings-desktop-schemas glib-networking; }; rest = callPackage ./core/rest { }; @@ -249,9 +255,9 @@ let yelp = callPackage ./core/yelp { }; - yelp_xsl = callPackage ./core/yelp-xsl { }; + yelp-xsl = callPackage ./core/yelp-xsl { }; - yelp_tools = callPackage ./core/yelp-tools { }; + yelp-tools = callPackage ./core/yelp-tools { }; zenity = callPackage ./core/zenity { }; @@ -401,6 +407,34 @@ let gnome-packagekit = callPackage ./misc/gnome-packagekit { }; +#### Legacy aliases + + evolution_data_server = evolution-data-server; # added 2018-02-25 + geocode_glib = geocode-glib; # added 2018-02-25 + glib_networking = glib-networking; # added 2018-02-25 + gnome_common = gnome-common; # added 2018-02-25 + gnome_control_center = gnome-control-center; # added 2018-02-25 + gnome_desktop = gnome-desktop; # added 2018-02-25 + gnome_keyring = gnome-keyring; # added 2018-02-25 + gnome_online_accounts = gnome-online-accounts; # added 2018-02-25 + gnome_session = gnome-session; # added 2018-02-25 + gnome_settings_daemon = gnome-settings-daemon; # added 2018-02-25 + gnome_shell = gnome-shell; # added 2018-02-25 + gnome_terminal = gnome-terminal; # added 2018-02-25 + gnome_themes_standard = gnome-themes-standard; # added 2018-02-25 + gsettings_desktop_schemas = gsettings-desktop-schemas; # added 2018-02-25 + libcanberra_gtk2 = libcanberra-gtk2; # added 2018-02-25 + libgnome_keyring = libgnome-keyring; # added 2018-02-25 + networkmanager_fortisslvpn = networkmanager-fortisslvpn; # added 2018-02-25 + networkmanager_iodine = networkmanager-iodine; # added 2018-02-25 + networkmanager_l2tp = networkmanager-l2tp; # added 2018-02-25 + networkmanager_openconnect = networkmanager-openconnect; # added 2018-02-25 + networkmanager_openvpn = networkmanager-openvpn; # added 2018-02-25 + networkmanager_pptp = networkmanager-pptp; # added 2018-02-25 + networkmanager_vpnc = networkmanager-vpnc; # added 2018-02-25 + yelp_xsl = yelp-xsl; # added 2018-02-25 + yelp_tools = yelp-tools; # added 2018-02-25 + }; in self; # pkgsFun diff --git a/pkgs/desktops/gnome-3/devtools/anjuta/default.nix b/pkgs/desktops/gnome-3/devtools/anjuta/default.nix index 4347f72cc5f6..419588f86842 100644 --- a/pkgs/desktops/gnome-3/devtools/anjuta/default.nix +++ b/pkgs/desktops/gnome-3/devtools/anjuta/default.nix @@ -2,7 +2,17 @@ itstool, python3, ncurses, makeWrapper }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "anjuta-${version}"; + version = "3.26.0"; + + src = fetchurl { + url = "mirror://gnome/sources/anjuta/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "fb895464c1a3c915bb2bb3ea5d236fd17202caa7205f6792f70a75affc343d70"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "anjuta"; attrPath = "gnome3.anjuta"; }; + }; enableParallelBuilding = true; @@ -14,7 +24,7 @@ stdenv.mkDerivation rec { buildInputs = [ flex bison gtk3 libxml2 gnome3.gjs gnome3.gdl gnome3.libgda gnome3.gtksourceview - gnome3.gsettings_desktop_schemas + gnome3.gsettings-desktop-schemas ]; preFixup = '' diff --git a/pkgs/desktops/gnome-3/devtools/anjuta/src.nix b/pkgs/desktops/gnome-3/devtools/anjuta/src.nix deleted file mode 100644 index 32843b14d8e4..000000000000 --- a/pkgs/desktops/gnome-3/devtools/anjuta/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "anjuta-3.26.0"; - - src = fetchurl { - url = mirror://gnome/sources/anjuta/3.26/anjuta-3.26.0.tar.xz; - sha256 = "fb895464c1a3c915bb2bb3ea5d236fd17202caa7205f6792f70a75affc343d70"; - }; -} diff --git a/pkgs/desktops/gnome-3/devtools/devhelp/default.nix b/pkgs/desktops/gnome-3/devtools/devhelp/default.nix index 08dbade67fbf..321e887cba6d 100644 --- a/pkgs/desktops/gnome-3/devtools/devhelp/default.nix +++ b/pkgs/desktops/gnome-3/devtools/devhelp/default.nix @@ -1,13 +1,23 @@ { stdenv, fetchurl, pkgconfig, gnome3, gtk3, wrapGAppsHook -, webkitgtk, intltool, gsettings_desktop_schemas }: +, webkitgtk, intltool, gsettings-desktop-schemas }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "devhelp-${version}"; + version = "3.26.1"; + + src = fetchurl { + url = "mirror://gnome/sources/devhelp/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "10bd468ae2188abd98af9ba7b81aced337d2206e9d843eb44520be5b00d77d8e"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "devhelp"; attrPath = "gnome3.devhelp"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ gtk3 wrapGAppsHook webkitgtk intltool gnome3.defaultIconTheme - gsettings_desktop_schemas + gsettings-desktop-schemas ]; meta = with stdenv.lib; { diff --git a/pkgs/desktops/gnome-3/devtools/devhelp/src.nix b/pkgs/desktops/gnome-3/devtools/devhelp/src.nix deleted file mode 100644 index 15c4671e31fb..000000000000 --- a/pkgs/desktops/gnome-3/devtools/devhelp/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "devhelp-3.26.1"; - - src = fetchurl { - url = mirror://gnome/sources/devhelp/3.26/devhelp-3.26.1.tar.xz; - sha256 = "10bd468ae2188abd98af9ba7b81aced337d2206e9d843eb44520be5b00d77d8e"; - }; -} diff --git a/pkgs/desktops/gnome-3/devtools/gdl/default.nix b/pkgs/desktops/gnome-3/devtools/gdl/default.nix index f12bbb0ca41d..07fc15f0d553 100644 --- a/pkgs/desktops/gnome-3/devtools/gdl/default.nix +++ b/pkgs/desktops/gnome-3/devtools/gdl/default.nix @@ -1,7 +1,17 @@ { stdenv, fetchurl, pkgconfig, libxml2, gtk3, gnome3, intltool }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gdl-${version}"; + version = "3.26.0"; + + src = fetchurl { + url = "mirror://gnome/sources/gdl/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "f3ad03f9a34f751f52464e22d962c0dec8ff867b7b7b37fe24907f3dcd54c079"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gdl"; attrPath = "gnome3.gdl"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ libxml2 gtk3 intltool ]; diff --git a/pkgs/desktops/gnome-3/devtools/gdl/src.nix b/pkgs/desktops/gnome-3/devtools/gdl/src.nix deleted file mode 100644 index 6475b36508cb..000000000000 --- a/pkgs/desktops/gnome-3/devtools/gdl/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gdl-3.26.0"; - - src = fetchurl { - url = mirror://gnome/sources/gdl/3.26/gdl-3.26.0.tar.xz; - sha256 = "f3ad03f9a34f751f52464e22d962c0dec8ff867b7b7b37fe24907f3dcd54c079"; - }; -} diff --git a/pkgs/desktops/gnome-3/devtools/gnome-devel-docs/default.nix b/pkgs/desktops/gnome-3/devtools/gnome-devel-docs/default.nix index 50960f41a312..3949e29089c8 100644 --- a/pkgs/desktops/gnome-3/devtools/gnome-devel-docs/default.nix +++ b/pkgs/desktops/gnome-3/devtools/gnome-devel-docs/default.nix @@ -1,7 +1,17 @@ { stdenv, fetchurl, gnome3, intltool, itstool, libxml2 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-devel-docs-${version}"; + version = "3.26.0"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-devel-docs/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "12eea77b550acfa617e14a89e4d24f93881294340abcc2c3abc7092c851703c3"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-devel-docs"; attrPath = "gnome3.gnome-devel-docs"; }; + }; buildInputs = [ intltool itstool libxml2 ]; diff --git a/pkgs/desktops/gnome-3/devtools/gnome-devel-docs/src.nix b/pkgs/desktops/gnome-3/devtools/gnome-devel-docs/src.nix deleted file mode 100644 index 4838b8f9d09e..000000000000 --- a/pkgs/desktops/gnome-3/devtools/gnome-devel-docs/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-devel-docs-3.26.0"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-devel-docs/3.26/gnome-devel-docs-3.26.0.tar.xz; - sha256 = "12eea77b550acfa617e14a89e4d24f93881294340abcc2c3abc7092c851703c3"; - }; -} diff --git a/pkgs/desktops/gnome-3/devtools/nemiver/default.nix b/pkgs/desktops/gnome-3/devtools/nemiver/default.nix index cf200cb32925..19853b19fcae 100644 --- a/pkgs/desktops/gnome-3/devtools/nemiver/default.nix +++ b/pkgs/desktops/gnome-3/devtools/nemiver/default.nix @@ -3,7 +3,17 @@ gtksourceviewmm, wrapGAppsHook }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "nemiver-${version}"; + version = "0.9.6"; + + src = fetchurl { + url = "mirror://gnome/sources/nemiver/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "85ab8cf6c4f83262f441cb0952a6147d075c3c53d0687389a3555e946b694ef2"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "nemiver"; attrPath = "gnome3.nemiver"; }; + }; nativeBuildInputs = [ pkgconfig wrapGAppsHook ]; diff --git a/pkgs/desktops/gnome-3/devtools/nemiver/src.nix b/pkgs/desktops/gnome-3/devtools/nemiver/src.nix deleted file mode 100644 index 2fcf639fe1b4..000000000000 --- a/pkgs/desktops/gnome-3/devtools/nemiver/src.nix +++ /dev/null @@ -1,11 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "nemiver-0.9.6"; - - src = fetchurl { - url = mirror://gnome/sources/nemiver/0.9/nemiver-0.9.6.tar.xz; - sha256 = "85ab8cf6c4f83262f441cb0952a6147d075c3c53d0687389a3555e946b694ef2"; - }; -} - diff --git a/pkgs/desktops/gnome-3/extensions/chrome-gnome-shell/default.nix b/pkgs/desktops/gnome-3/extensions/chrome-gnome-shell/default.nix index 11d891b67434..d22dbd49d393 100644 --- a/pkgs/desktops/gnome-3/extensions/chrome-gnome-shell/default.nix +++ b/pkgs/desktops/gnome-3/extensions/chrome-gnome-shell/default.nix @@ -13,7 +13,7 @@ in stdenv.mkDerivation rec { }; nativeBuildInputs = [ cmake ninja jq wrapGAppsHook ]; - buildInputs = [ gnome3.gnome_shell python pygobject3 requests ]; + buildInputs = [ gnome3.gnome-shell python pygobject3 requests ]; preConfigure = '' substituteInPlace CMakeLists.txt --replace "/etc" "$out/etc" diff --git a/pkgs/desktops/gnome-3/extensions/no-title-bar/default.nix b/pkgs/desktops/gnome-3/extensions/no-title-bar/default.nix new file mode 100644 index 000000000000..43e94ce6bfbb --- /dev/null +++ b/pkgs/desktops/gnome-3/extensions/no-title-bar/default.nix @@ -0,0 +1,35 @@ +{ stdenv, fetchFromGitHub, substituteAll, glib, gettext, xorg }: + +stdenv.mkDerivation rec { + name = "gnome-shell-extension-no-title-bar-${version}"; + version = "8"; + + src = fetchFromGitHub { + owner = "franglais125"; + repo = "no-title-bar"; + rev = "v${version}"; + sha256 = "0n3ayf7k2icy913sjl1d6iwm21i8fivv0f7wj7gck8q7q2j7i3bz"; + }; + + nativeBuildInputs = [ + glib gettext + ]; + + patches = [ + (substituteAll { + src = ./fix-paths.patch; + xprop = "${xorg.xprop}/bin/xprop"; + xwininfo = "${xorg.xwininfo}/bin/xwininfo"; + }) + ]; + + makeFlags = [ "INSTALLBASE=$(out)/share/gnome-shell/extensions" ]; + + meta = with stdenv.lib; { + description = "Integrates maximized windows with the top panel"; + homepage = https://github.com/franglais125/no-title-bar; + license = licenses.gpl2; + maintainers = with maintainers; [ jonafato svsdep ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/desktops/gnome-3/extensions/no-title-bar/fix-paths.patch b/pkgs/desktops/gnome-3/extensions/no-title-bar/fix-paths.patch new file mode 100644 index 000000000000..9a53d63860da --- /dev/null +++ b/pkgs/desktops/gnome-3/extensions/no-title-bar/fix-paths.patch @@ -0,0 +1,56 @@ +--- a/decoration.js ++++ b/decoration.js +@@ -181,7 +181,7 @@ + let act = win.get_compositor_private(); + let xwindow = act && act['x-window']; + if (xwindow) { +- let xwininfo = GLib.spawn_command_line_sync('xwininfo -children -id 0x%x'.format(xwindow)); ++ let xwininfo = GLib.spawn_command_line_sync('@xwininfo@ -children -id 0x%x'.format(xwindow)); + if (xwininfo[0]) { + let str = xwininfo[1].toString(); + +@@ -207,7 +207,7 @@ + // Try enumerating all available windows and match the title. Note that this + // may be necessary if the title contains special characters and `x-window` + // is not available. +- let result = GLib.spawn_command_line_sync('xprop -root _NET_CLIENT_LIST'); ++ let result = GLib.spawn_command_line_sync('@xprop@ -root _NET_CLIENT_LIST'); + if (result[0]) { + let str = result[1].toString(); + +@@ -218,7 +218,7 @@ + + // For each window ID, check if the title matches the desired title. + for (var i = 0; i < windowList.length; ++i) { +- let cmd = 'xprop -id "' + windowList[i] + '" _NET_WM_NAME _NO_TITLE_BAR_ORIGINAL_STATE'; ++ let cmd = '@xprop@ -id "' + windowList[i] + '" _NET_WM_NAME _NO_TITLE_BAR_ORIGINAL_STATE'; + let result = GLib.spawn_command_line_sync(cmd); + + if (result[0]) { +@@ -258,7 +258,7 @@ + } + + let id = this._guessWindowXID(win); +- let cmd = 'xprop -id ' + id; ++ let cmd = '@xprop@ -id ' + id; + + let xprops = GLib.spawn_command_line_sync(cmd); + if (!xprops[0]) { +@@ -277,7 +277,7 @@ + m = str.match(/^_GTK_HIDE_TITLEBAR_WHEN_MAXIMIZED(\(CARDINAL\))? = ([0-9]+)$/m); + if (m) { + let state = !!parseInt(m[2]); +- cmd = ['xprop', '-id', id, ++ cmd = ['@xprop@', '-id', id, + '-f', '_NO_TITLE_BAR_ORIGINAL_STATE', '32c', + '-set', '_NO_TITLE_BAR_ORIGINAL_STATE', + (state ? '0x1' : '0x0')]; +@@ -358,7 +358,7 @@ + let winXID = this._guessWindowXID(win); + if (winXID == null) + return; +- let cmd = ['xprop', '-id', winXID, ++ let cmd = ['@xprop@', '-id', winXID, + '-f', '_GTK_HIDE_TITLEBAR_WHEN_MAXIMIZED', '32c', + '-set', '_GTK_HIDE_TITLEBAR_WHEN_MAXIMIZED', + (hide ? '0x1' : '0x0')]; diff --git a/pkgs/desktops/gnome-3/extensions/pixel-saver/default.nix b/pkgs/desktops/gnome-3/extensions/pixel-saver/default.nix deleted file mode 100644 index ccc3fd578e94..000000000000 --- a/pkgs/desktops/gnome-3/extensions/pixel-saver/default.nix +++ /dev/null @@ -1,28 +0,0 @@ -{ stdenv, fetchFromGitHub }: - -stdenv.mkDerivation rec { - name = "gnome-shell-extension-pixel-saver-${version}"; - version = "1.10"; - - src = fetchFromGitHub { - owner = "deadalnix"; - repo = "pixel-saver"; - rev = version; - sha256 = "040ayzhpv9jq49vp32w85wvjs57047faa7872qm4brii450iy7v4"; - }; - - uuid = "pixel-saver@deadalnix.me"; - - installPhase = '' - mkdir -p $out/share/gnome-shell/extensions - cp -r ${uuid} $out/share/gnome-shell/extensions - ''; - - meta = with stdenv.lib; { - description = "Pixel Saver is designed to save pixel by fusing activity bar and title bar in a natural way"; - license = licenses.mit; - maintainers = with maintainers; [ jonafato ]; - platforms = platforms.linux; - homepage = https://github.com/deadalnix/pixel-saver; - }; -} diff --git a/pkgs/desktops/gnome-3/find-latest-version.py b/pkgs/desktops/gnome-3/find-latest-version.py new file mode 100644 index 000000000000..e6089c69c042 --- /dev/null +++ b/pkgs/desktops/gnome-3/find-latest-version.py @@ -0,0 +1,58 @@ +import argparse +import json +import requests +import sys + +def version_to_list(version): + return list(map(int, version.split('.'))) + +def odd_unstable(version_str, selected): + version = version_to_list(version_str) + if len(version) < 2: + return True + + even = version[1] % 2 == 0 + if selected == 'stable': + return even + else: + return not even + +def no_policy(version, selected): + return True + +version_policies = { + 'odd-unstable': odd_unstable, + 'none': no_policy, +} + +def make_version_policy(version_predicate, selected): + return lambda version: version_predicate(version, selected) + +parser = argparse.ArgumentParser(description='Find latest version for a GNOME package by crawling their release server.') +parser.add_argument('package-name', help='Name of the directory in https://ftp.gnome.org/pub/GNOME/sources/ containing the package.') +parser.add_argument('version-policy', help='Policy determining which versions are considered stable. For most GNOME packages, odd minor versions are unstable but there are exceptions.', choices=version_policies.keys(), nargs='?', default='odd-unstable') +parser.add_argument('requested-release', help='Most of the time, we will want to update to stable version but sometimes it is useful to test.', choices=['stable', 'unstable'], nargs='?', default='stable') + + +if __name__ == '__main__': + args = parser.parse_args() + + package_name = getattr(args, 'package-name') + requested_release = getattr(args, 'requested-release') + version_predicate = version_policies[getattr(args, 'version-policy')] + version_policy = make_version_policy(version_predicate, requested_release) + + # The structure of cache.json: https://gitlab.gnome.org/Infrastructure/sysadmin-bin/blob/master/ftpadmin#L762 + cache = json.loads(requests.get('https://ftp.gnome.org/pub/GNOME/sources/{}/cache.json'.format(package_name)).text) + if type(cache) != list or cache[0] != 4: + print('Unknown format of cache.json file.', file=sys.stderr) + sys.exit(1) + + versions = cache[2][package_name] + versions = sorted(filter(version_policy, versions), key=version_to_list) + + if len(versions) == 0: + print('No versions matched.', file=sys.stderr) + sys.exit(1) + + print(versions[-1]) diff --git a/pkgs/desktops/gnome-3/games/aisleriot/default.nix b/pkgs/desktops/gnome-3/games/aisleriot/default.nix index 40e1473b59e2..b194ac42bf24 100644 --- a/pkgs/desktops/gnome-3/games/aisleriot/default.nix +++ b/pkgs/desktops/gnome-3/games/aisleriot/default.nix @@ -1,15 +1,25 @@ { stdenv, fetchurl, pkgconfig, gnome3, intltool, itstool, gtk3 -, wrapGAppsHook, gconf, librsvg, libxml2, desktop_file_utils -, guile_2_0, libcanberra_gtk3 }: +, wrapGAppsHook, gconf, librsvg, libxml2, desktop-file-utils +, guile_2_0, libcanberra-gtk3 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "aisleriot-${version}"; + version = "3.22.4"; + + src = fetchurl { + url = "mirror://gnome/sources/aisleriot/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "fe8dee3ad771ab778d37740a26410778aa5c61e8eb75dd42b9a5e5719c6e34fb"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "aisleriot"; attrPath = "gnome3.aisleriot"; }; + }; configureFlags = [ "--with-card-theme-formats=svg" ]; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ intltool itstool gtk3 wrapGAppsHook gconf - librsvg libxml2 desktop_file_utils guile_2_0 libcanberra_gtk3 ]; + librsvg libxml2 desktop-file-utils guile_2_0 libcanberra-gtk3 ]; meta = with stdenv.lib; { homepage = https://wiki.gnome.org/Apps/Aisleriot; diff --git a/pkgs/desktops/gnome-3/games/aisleriot/src.nix b/pkgs/desktops/gnome-3/games/aisleriot/src.nix deleted file mode 100644 index 7fee97bae1df..000000000000 --- a/pkgs/desktops/gnome-3/games/aisleriot/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "aisleriot-3.22.4"; - - src = fetchurl { - url = mirror://gnome/sources/aisleriot/3.22/aisleriot-3.22.4.tar.xz; - sha256 = "fe8dee3ad771ab778d37740a26410778aa5c61e8eb75dd42b9a5e5719c6e34fb"; - }; -} diff --git a/pkgs/desktops/gnome-3/games/five-or-more/default.nix b/pkgs/desktops/gnome-3/games/five-or-more/default.nix index 48b2b3823729..8806344f3b38 100644 --- a/pkgs/desktops/gnome-3/games/five-or-more/default.nix +++ b/pkgs/desktops/gnome-3/games/five-or-more/default.nix @@ -2,7 +2,17 @@ , librsvg, intltool, itstool, libxml2 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "five-or-more-${version}"; + version = "3.26.0"; + + src = fetchurl { + url = "mirror://gnome/sources/five-or-more/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "7c24f7f2603df99299d38b40b14c005aaad88820113ed71e4b3765ac3b027772"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "five-or-more"; attrPath = "gnome3.five-or-more"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ diff --git a/pkgs/desktops/gnome-3/games/five-or-more/src.nix b/pkgs/desktops/gnome-3/games/five-or-more/src.nix deleted file mode 100644 index 676e1a7d75a3..000000000000 --- a/pkgs/desktops/gnome-3/games/five-or-more/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "five-or-more-3.26.0"; - - src = fetchurl { - url = mirror://gnome/sources/five-or-more/3.26/five-or-more-3.26.0.tar.xz; - sha256 = "7c24f7f2603df99299d38b40b14c005aaad88820113ed71e4b3765ac3b027772"; - }; -} diff --git a/pkgs/desktops/gnome-3/games/four-in-a-row/default.nix b/pkgs/desktops/gnome-3/games/four-in-a-row/default.nix index 486fe5c486e0..22032f16f477 100644 --- a/pkgs/desktops/gnome-3/games/four-in-a-row/default.nix +++ b/pkgs/desktops/gnome-3/games/four-in-a-row/default.nix @@ -1,12 +1,22 @@ { stdenv, fetchurl, pkgconfig, gnome3, gtk3, wrapGAppsHook -, intltool, itstool, libcanberra_gtk3, librsvg, libxml2 }: +, intltool, itstool, libcanberra-gtk3, librsvg, libxml2 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "four-in-a-row-${version}"; + version = "3.22.2"; + + src = fetchurl { + url = "mirror://gnome/sources/four-in-a-row/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "bc4194e8ab6d1d2a6a63a2e91945cd5465f49ebf0dae2eecacc66e69db56a420"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "four-in-a-row"; attrPath = "gnome3.four-in-a-row"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ - gtk3 wrapGAppsHook intltool itstool libcanberra_gtk3 librsvg + gtk3 wrapGAppsHook intltool itstool libcanberra-gtk3 librsvg libxml2 gnome3.defaultIconTheme ]; diff --git a/pkgs/desktops/gnome-3/games/four-in-a-row/src.nix b/pkgs/desktops/gnome-3/games/four-in-a-row/src.nix deleted file mode 100644 index 9e2b23f3996b..000000000000 --- a/pkgs/desktops/gnome-3/games/four-in-a-row/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "four-in-a-row-3.22.2"; - - src = fetchurl { - url = mirror://gnome/sources/four-in-a-row/3.22/four-in-a-row-3.22.2.tar.xz; - sha256 = "bc4194e8ab6d1d2a6a63a2e91945cd5465f49ebf0dae2eecacc66e69db56a420"; - }; -} diff --git a/pkgs/desktops/gnome-3/games/gnome-chess/default.nix b/pkgs/desktops/gnome-3/games/gnome-chess/default.nix index bfa345c4a40b..f50542770c4f 100644 --- a/pkgs/desktops/gnome-3/games/gnome-chess/default.nix +++ b/pkgs/desktops/gnome-3/games/gnome-chess/default.nix @@ -2,7 +2,17 @@ , intltool, itstool, librsvg, libxml2 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-chess-${version}"; + version = "3.26.0"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-chess/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "a0f6f862ab7067626a3a86cdc9c14dde595e38e6719e0198cb967e11facf1f12"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-chess"; attrPath = "gnome3.gnome-chess"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ diff --git a/pkgs/desktops/gnome-3/games/gnome-chess/src.nix b/pkgs/desktops/gnome-3/games/gnome-chess/src.nix deleted file mode 100644 index ee682d3801bd..000000000000 --- a/pkgs/desktops/gnome-3/games/gnome-chess/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-chess-3.26.0"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-chess/3.26/gnome-chess-3.26.0.tar.xz; - sha256 = "a0f6f862ab7067626a3a86cdc9c14dde595e38e6719e0198cb967e11facf1f12"; - }; -} diff --git a/pkgs/desktops/gnome-3/games/gnome-klotski/default.nix b/pkgs/desktops/gnome-3/games/gnome-klotski/default.nix index 13afae2eb2cb..c1f91092bb0d 100644 --- a/pkgs/desktops/gnome-3/games/gnome-klotski/default.nix +++ b/pkgs/desktops/gnome-3/games/gnome-klotski/default.nix @@ -2,7 +2,17 @@ , librsvg, libxml2, intltool, itstool, libgee, libgames-support }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-klotski-${version}"; + version = "3.22.2"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-klotski/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "16hd6yk01rhb4pj8m01fyn72wykf41d72gsms81q0n4zm5bm1a4h"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-klotski"; attrPath = "gnome3.gnome-klotski"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ diff --git a/pkgs/desktops/gnome-3/games/gnome-klotski/src.nix b/pkgs/desktops/gnome-3/games/gnome-klotski/src.nix deleted file mode 100644 index e37f3642c82e..000000000000 --- a/pkgs/desktops/gnome-3/games/gnome-klotski/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-klotski-3.22.2"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-klotski/3.22/gnome-klotski-3.22.2.tar.xz; - sha256 = "16hd6yk01rhb4pj8m01fyn72wykf41d72gsms81q0n4zm5bm1a4h"; - }; -} diff --git a/pkgs/desktops/gnome-3/games/gnome-mahjongg/default.nix b/pkgs/desktops/gnome-3/games/gnome-mahjongg/default.nix index 3d0d5d6df467..b9a4638a947c 100644 --- a/pkgs/desktops/gnome-3/games/gnome-mahjongg/default.nix +++ b/pkgs/desktops/gnome-3/games/gnome-mahjongg/default.nix @@ -2,7 +2,17 @@ , librsvg, intltool, itstool, libxml2 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-mahjongg-${version}"; + version = "3.22.0"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-mahjongg/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "f5972a14fa4ad04153bd6e68475b85cd79c6b44f6cac1fe1edb64dbad4135218"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-mahjongg"; attrPath = "gnome3.gnome-mahjongg"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ diff --git a/pkgs/desktops/gnome-3/games/gnome-mahjongg/src.nix b/pkgs/desktops/gnome-3/games/gnome-mahjongg/src.nix deleted file mode 100644 index c021136ee304..000000000000 --- a/pkgs/desktops/gnome-3/games/gnome-mahjongg/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-mahjongg-3.22.0"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-mahjongg/3.22/gnome-mahjongg-3.22.0.tar.xz; - sha256 = "f5972a14fa4ad04153bd6e68475b85cd79c6b44f6cac1fe1edb64dbad4135218"; - }; -} diff --git a/pkgs/desktops/gnome-3/games/gnome-mines/default.nix b/pkgs/desktops/gnome-3/games/gnome-mines/default.nix index d76e585bb4eb..ce5dc8bc14c0 100644 --- a/pkgs/desktops/gnome-3/games/gnome-mines/default.nix +++ b/pkgs/desktops/gnome-3/games/gnome-mines/default.nix @@ -2,7 +2,17 @@ , librsvg, intltool, itstool, libxml2, libgames-support, libgee }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-mines-${version}"; + version = "3.26.0"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-mines/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "2b041eaf0d57307498c56d8e285b2e539f634fdba95d689f6af75aa4ed6edde9"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-mines"; attrPath = "gnome3.gnome-mines"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ diff --git a/pkgs/desktops/gnome-3/games/gnome-mines/src.nix b/pkgs/desktops/gnome-3/games/gnome-mines/src.nix deleted file mode 100644 index 39096f00e42c..000000000000 --- a/pkgs/desktops/gnome-3/games/gnome-mines/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-mines-3.26.0"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-mines/3.26/gnome-mines-3.26.0.tar.xz; - sha256 = "2b041eaf0d57307498c56d8e285b2e539f634fdba95d689f6af75aa4ed6edde9"; - }; -} diff --git a/pkgs/desktops/gnome-3/games/gnome-nibbles/default.nix b/pkgs/desktops/gnome-3/games/gnome-nibbles/default.nix index 90fdccc11860..302d8fb21010 100644 --- a/pkgs/desktops/gnome-3/games/gnome-nibbles/default.nix +++ b/pkgs/desktops/gnome-3/games/gnome-nibbles/default.nix @@ -1,14 +1,24 @@ { stdenv, fetchurl, pkgconfig, gnome3, gtk3, wrapGAppsHook -, librsvg, libcanberra_gtk3, clutter_gtk, intltool, itstool +, librsvg, libcanberra-gtk3, clutter-gtk, intltool, itstool , libxml2, libgee, libgames-support }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-nibbles-${version}"; + version = "3.24.0"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-nibbles/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "0ddc1fe03483958dd5513d04f5919ade991902d12da18a4c2d3307f818a5cb4f"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-nibbles"; attrPath = "gnome3.gnome-nibbles"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ gtk3 wrapGAppsHook intltool itstool libxml2 - librsvg libcanberra_gtk3 clutter_gtk gnome3.defaultIconTheme + librsvg libcanberra-gtk3 clutter-gtk gnome3.defaultIconTheme libgee libgames-support ]; diff --git a/pkgs/desktops/gnome-3/games/gnome-nibbles/src.nix b/pkgs/desktops/gnome-3/games/gnome-nibbles/src.nix deleted file mode 100644 index 133e9651fa74..000000000000 --- a/pkgs/desktops/gnome-3/games/gnome-nibbles/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-nibbles-3.24.0"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-nibbles/3.24/gnome-nibbles-3.24.0.tar.xz; - sha256 = "0ddc1fe03483958dd5513d04f5919ade991902d12da18a4c2d3307f818a5cb4f"; - }; -} diff --git a/pkgs/desktops/gnome-3/games/gnome-robots/default.nix b/pkgs/desktops/gnome-3/games/gnome-robots/default.nix index cd13e6ab9585..aa5e00606c7a 100644 --- a/pkgs/desktops/gnome-3/games/gnome-robots/default.nix +++ b/pkgs/desktops/gnome-3/games/gnome-robots/default.nix @@ -1,13 +1,23 @@ { stdenv, fetchurl, pkgconfig, gnome3, gtk3, wrapGAppsHook -, librsvg, libcanberra_gtk3, intltool, itstool, libxml2, libgames-support +, librsvg, libcanberra-gtk3, intltool, itstool, libxml2, libgames-support , libgee}: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-robots-${version}"; + version = "3.22.2"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-robots/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "c5d63f0fcae66d0df9b10e39387d09875555909f0aa7e57ef8552621d852082f"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-robots"; attrPath = "gnome3.gnome-robots"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ - gtk3 wrapGAppsHook intltool itstool librsvg libcanberra_gtk3 + gtk3 wrapGAppsHook intltool itstool librsvg libcanberra-gtk3 libxml2 gnome3.defaultIconTheme libgames-support libgee ]; diff --git a/pkgs/desktops/gnome-3/games/gnome-robots/src.nix b/pkgs/desktops/gnome-3/games/gnome-robots/src.nix deleted file mode 100644 index 09e4ad6c9673..000000000000 --- a/pkgs/desktops/gnome-3/games/gnome-robots/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-robots-3.22.2"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-robots/3.22/gnome-robots-3.22.2.tar.xz; - sha256 = "c5d63f0fcae66d0df9b10e39387d09875555909f0aa7e57ef8552621d852082f"; - }; -} diff --git a/pkgs/desktops/gnome-3/games/gnome-sudoku/default.nix b/pkgs/desktops/gnome-3/games/gnome-sudoku/default.nix index a0f83d48c3da..b3380e6bb96c 100644 --- a/pkgs/desktops/gnome-3/games/gnome-sudoku/default.nix +++ b/pkgs/desktops/gnome-3/games/gnome-sudoku/default.nix @@ -1,12 +1,22 @@ { stdenv, fetchurl, pkgconfig, intltool, gtk3, gnome3, wrapGAppsHook -, json_glib, qqwing, itstool, libxml2 }: +, json-glib, qqwing, itstool, libxml2 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-sudoku-${version}"; + version = "3.26.0"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-sudoku/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "8774c7093a97131b94d39142f1e044c8619cfdb6ad2546176271589fbb12d3a0"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-sudoku"; attrPath = "gnome3.gnome-sudoku"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ intltool wrapGAppsHook gtk3 gnome3.libgee - json_glib qqwing itstool libxml2 ]; + json-glib qqwing itstool libxml2 ]; meta = with stdenv.lib; { homepage = https://wiki.gnome.org/Apps/Sudoku; diff --git a/pkgs/desktops/gnome-3/games/gnome-sudoku/src.nix b/pkgs/desktops/gnome-3/games/gnome-sudoku/src.nix deleted file mode 100644 index f19142cf251e..000000000000 --- a/pkgs/desktops/gnome-3/games/gnome-sudoku/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-sudoku-3.26.0"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-sudoku/3.26/gnome-sudoku-3.26.0.tar.xz; - sha256 = "8774c7093a97131b94d39142f1e044c8619cfdb6ad2546176271589fbb12d3a0"; - }; -} diff --git a/pkgs/desktops/gnome-3/games/gnome-taquin/default.nix b/pkgs/desktops/gnome-3/games/gnome-taquin/default.nix index d456abe6dc1f..4f87fb50d619 100644 --- a/pkgs/desktops/gnome-3/games/gnome-taquin/default.nix +++ b/pkgs/desktops/gnome-3/games/gnome-taquin/default.nix @@ -1,12 +1,22 @@ { stdenv, fetchurl, pkgconfig, gnome3, gtk3, wrapGAppsHook -, librsvg, libcanberra_gtk3, intltool, itstool, libxml2 }: +, librsvg, libcanberra-gtk3, intltool, itstool, libxml2 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-taquin-${version}"; + version = "3.26.1"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-taquin/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "de352bb2dfcd759de37f6bccf1e4790760e020b4bb06a1bc8d5f03d89613b6fd"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-taquin"; attrPath = "gnome3.gnome-taquin"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ - gtk3 wrapGAppsHook librsvg libcanberra_gtk3 + gtk3 wrapGAppsHook librsvg libcanberra-gtk3 intltool itstool libxml2 gnome3.defaultIconTheme ]; diff --git a/pkgs/desktops/gnome-3/games/gnome-taquin/src.nix b/pkgs/desktops/gnome-3/games/gnome-taquin/src.nix deleted file mode 100644 index 30a33e28e2de..000000000000 --- a/pkgs/desktops/gnome-3/games/gnome-taquin/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-taquin-3.26.1"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-taquin/3.26/gnome-taquin-3.26.1.tar.xz; - sha256 = "de352bb2dfcd759de37f6bccf1e4790760e020b4bb06a1bc8d5f03d89613b6fd"; - }; -} diff --git a/pkgs/desktops/gnome-3/games/gnome-tetravex/default.nix b/pkgs/desktops/gnome-3/games/gnome-tetravex/default.nix index 37218776f123..f456b7ee6831 100644 --- a/pkgs/desktops/gnome-3/games/gnome-tetravex/default.nix +++ b/pkgs/desktops/gnome-3/games/gnome-tetravex/default.nix @@ -2,7 +2,17 @@ , libxml2, intltool, itstool }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-tetravex-${version}"; + version = "3.22.0"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-tetravex/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "0a6d7ff5ffcd6c05454a919d46a2e389d6b5f87bc80e82c52c2f20d9d914e18d"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-tetravex"; attrPath = "gnome3.gnome-tetravex"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ diff --git a/pkgs/desktops/gnome-3/games/gnome-tetravex/src.nix b/pkgs/desktops/gnome-3/games/gnome-tetravex/src.nix deleted file mode 100644 index e79b18263b99..000000000000 --- a/pkgs/desktops/gnome-3/games/gnome-tetravex/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-tetravex-3.22.0"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-tetravex/3.22/gnome-tetravex-3.22.0.tar.xz; - sha256 = "0a6d7ff5ffcd6c05454a919d46a2e389d6b5f87bc80e82c52c2f20d9d914e18d"; - }; -} diff --git a/pkgs/desktops/gnome-3/games/hitori/default.nix b/pkgs/desktops/gnome-3/games/hitori/default.nix index 857aec9700f3..db01eb86f173 100644 --- a/pkgs/desktops/gnome-3/games/hitori/default.nix +++ b/pkgs/desktops/gnome-3/games/hitori/default.nix @@ -2,7 +2,17 @@ , libxml2, intltool, itstool }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "hitori-${version}"; + version = "3.22.4"; + + src = fetchurl { + url = "mirror://gnome/sources/hitori/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "dcac6909b6007857ee425ac8c65fed179f2c71da138d5e5300cd62c8b9ea15d3"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "hitori"; attrPath = "gnome3.hitori"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ diff --git a/pkgs/desktops/gnome-3/games/hitori/src.nix b/pkgs/desktops/gnome-3/games/hitori/src.nix deleted file mode 100644 index 93dcd5de62e3..000000000000 --- a/pkgs/desktops/gnome-3/games/hitori/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "hitori-3.22.4"; - - src = fetchurl { - url = mirror://gnome/sources/hitori/3.22/hitori-3.22.4.tar.xz; - sha256 = "dcac6909b6007857ee425ac8c65fed179f2c71da138d5e5300cd62c8b9ea15d3"; - }; -} diff --git a/pkgs/desktops/gnome-3/games/iagno/default.nix b/pkgs/desktops/gnome-3/games/iagno/default.nix index 3836548b3ab2..d31457f868c4 100644 --- a/pkgs/desktops/gnome-3/games/iagno/default.nix +++ b/pkgs/desktops/gnome-3/games/iagno/default.nix @@ -1,12 +1,22 @@ { stdenv, fetchurl, pkgconfig, gtk3, gnome3, gdk_pixbuf, librsvg, wrapGAppsHook -, intltool, itstool, libcanberra_gtk3, libxml2, dconf }: +, intltool, itstool, libcanberra-gtk3, libxml2, dconf }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "iagno-${version}"; + version = "3.26.1"; + + src = fetchurl { + url = "mirror://gnome/sources/iagno/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "3476810d0c42aa1600484de2c111c94e0cf5247a98f071b23a0b5e3036362121"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "iagno"; attrPath = "gnome3.iagno"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ gtk3 gnome3.defaultIconTheme gdk_pixbuf librsvg - dconf libxml2 libcanberra_gtk3 wrapGAppsHook itstool intltool ]; + dconf libxml2 libcanberra-gtk3 wrapGAppsHook itstool intltool ]; enableParallelBuilding = true; diff --git a/pkgs/desktops/gnome-3/games/iagno/src.nix b/pkgs/desktops/gnome-3/games/iagno/src.nix deleted file mode 100644 index 86c1f30e5d66..000000000000 --- a/pkgs/desktops/gnome-3/games/iagno/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "iagno-3.26.1"; - - src = fetchurl { - url = mirror://gnome/sources/iagno/3.26/iagno-3.26.1.tar.xz; - sha256 = "3476810d0c42aa1600484de2c111c94e0cf5247a98f071b23a0b5e3036362121"; - }; -} diff --git a/pkgs/desktops/gnome-3/games/lightsoff/default.nix b/pkgs/desktops/gnome-3/games/lightsoff/default.nix index 7bd3ca95de94..1a163352cfc8 100644 --- a/pkgs/desktops/gnome-3/games/lightsoff/default.nix +++ b/pkgs/desktops/gnome-3/games/lightsoff/default.nix @@ -1,12 +1,22 @@ { stdenv, fetchurl, pkgconfig, gtk3, gnome3, gdk_pixbuf, librsvg, wrapGAppsHook -, intltool, itstool, clutter, clutter_gtk, libxml2, dconf }: +, intltool, itstool, clutter, clutter-gtk, libxml2, dconf }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "lightsoff-${version}"; + version = "3.26.0"; + + src = fetchurl { + url = "mirror://gnome/sources/lightsoff/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "d12572bc7b70481320ec90c6130ad794b559a9990d08bef158a1d826aaa35976"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "lightsoff"; attrPath = "gnome3.lightsoff"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ gtk3 gnome3.defaultIconTheme gdk_pixbuf librsvg dconf - libxml2 clutter clutter_gtk wrapGAppsHook itstool intltool ]; + libxml2 clutter clutter-gtk wrapGAppsHook itstool intltool ]; enableParallelBuilding = true; diff --git a/pkgs/desktops/gnome-3/games/lightsoff/src.nix b/pkgs/desktops/gnome-3/games/lightsoff/src.nix deleted file mode 100644 index 18528df24a38..000000000000 --- a/pkgs/desktops/gnome-3/games/lightsoff/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "lightsoff-3.26.0"; - - src = fetchurl { - url = mirror://gnome/sources/lightsoff/3.26/lightsoff-3.26.0.tar.xz; - sha256 = "d12572bc7b70481320ec90c6130ad794b559a9990d08bef158a1d826aaa35976"; - }; -} diff --git a/pkgs/desktops/gnome-3/games/quadrapassel/default.nix b/pkgs/desktops/gnome-3/games/quadrapassel/default.nix index 514b2a035575..b0572f981ded 100644 --- a/pkgs/desktops/gnome-3/games/quadrapassel/default.nix +++ b/pkgs/desktops/gnome-3/games/quadrapassel/default.nix @@ -1,14 +1,24 @@ { stdenv, fetchurl, pkgconfig, gtk3, gnome3, gdk_pixbuf -, librsvg, libcanberra_gtk3 -, intltool, itstool, libxml2, clutter, clutter_gtk, wrapGAppsHook }: +, librsvg, libcanberra-gtk3 +, intltool, itstool, libxml2, clutter, clutter-gtk, wrapGAppsHook }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "quadrapassel-${version}"; + version = "3.22.0"; + + src = fetchurl { + url = "mirror://gnome/sources/quadrapassel/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "0ed44ef73c8811cbdfc3b44c8fd80eb6e2998d102d59ac324e4748f5d9dddb55"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "quadrapassel"; attrPath = "gnome3.quadrapassel"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ gtk3 gnome3.defaultIconTheme gdk_pixbuf librsvg - libcanberra_gtk3 itstool intltool clutter - libxml2 clutter_gtk wrapGAppsHook ]; + libcanberra-gtk3 itstool intltool clutter + libxml2 clutter-gtk wrapGAppsHook ]; enableParallelBuilding = true; diff --git a/pkgs/desktops/gnome-3/games/quadrapassel/src.nix b/pkgs/desktops/gnome-3/games/quadrapassel/src.nix deleted file mode 100644 index 57bdb4771ddf..000000000000 --- a/pkgs/desktops/gnome-3/games/quadrapassel/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "quadrapassel-3.22.0"; - - src = fetchurl { - url = mirror://gnome/sources/quadrapassel/3.22/quadrapassel-3.22.0.tar.xz; - sha256 = "0ed44ef73c8811cbdfc3b44c8fd80eb6e2998d102d59ac324e4748f5d9dddb55"; - }; -} diff --git a/pkgs/desktops/gnome-3/games/swell-foop/default.nix b/pkgs/desktops/gnome-3/games/swell-foop/default.nix index c6416960b7aa..92da14fb5597 100644 --- a/pkgs/desktops/gnome-3/games/swell-foop/default.nix +++ b/pkgs/desktops/gnome-3/games/swell-foop/default.nix @@ -1,12 +1,22 @@ { stdenv, fetchurl, pkgconfig, gtk3, gnome3, gdk_pixbuf, librsvg, dconf -, clutter, clutter_gtk, intltool, itstool, libxml2, wrapGAppsHook }: +, clutter, clutter-gtk, intltool, itstool, libxml2, wrapGAppsHook }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "swell-foop-${version}"; + version = "3.26.0"; + + src = fetchurl { + url = "mirror://gnome/sources/swell-foop/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "122e2b5a51ad0144ea6b5fd2736ac43b101c7892198948e697bfc4c014bbba22"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "swell-foop"; attrPath = "gnome3.swell-foop"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ gtk3 gnome3.defaultIconTheme gdk_pixbuf librsvg - dconf wrapGAppsHook itstool intltool clutter clutter_gtk libxml2 ]; + dconf wrapGAppsHook itstool intltool clutter clutter-gtk libxml2 ]; enableParallelBuilding = true; diff --git a/pkgs/desktops/gnome-3/games/swell-foop/src.nix b/pkgs/desktops/gnome-3/games/swell-foop/src.nix deleted file mode 100644 index 082081ca36c7..000000000000 --- a/pkgs/desktops/gnome-3/games/swell-foop/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "swell-foop-3.26.0"; - - src = fetchurl { - url = mirror://gnome/sources/swell-foop/3.26/swell-foop-3.26.0.tar.xz; - sha256 = "122e2b5a51ad0144ea6b5fd2736ac43b101c7892198948e697bfc4c014bbba22"; - }; -} diff --git a/pkgs/desktops/gnome-3/games/tali/default.nix b/pkgs/desktops/gnome-3/games/tali/default.nix index 6f6beee89615..f8d799b69141 100644 --- a/pkgs/desktops/gnome-3/games/tali/default.nix +++ b/pkgs/desktops/gnome-3/games/tali/default.nix @@ -2,7 +2,17 @@ , librsvg, intltool, itstool, libxml2, wrapGAppsHook }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "tali-${version}"; + version = "3.22.0"; + + src = fetchurl { + url = "mirror://gnome/sources/tali/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "5ba17794d6fb06b794daaffa62a6aaa372b7de8886ce5ec596c37e62bb71728b"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "tali"; attrPath = "gnome3.tali"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ gtk3 gnome3.defaultIconTheme gdk_pixbuf librsvg diff --git a/pkgs/desktops/gnome-3/games/tali/src.nix b/pkgs/desktops/gnome-3/games/tali/src.nix deleted file mode 100644 index 108144cc3eef..000000000000 --- a/pkgs/desktops/gnome-3/games/tali/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "tali-3.22.0"; - - src = fetchurl { - url = mirror://gnome/sources/tali/3.22/tali-3.22.0.tar.xz; - sha256 = "5ba17794d6fb06b794daaffa62a6aaa372b7de8886ce5ec596c37e62bb71728b"; - }; -} diff --git a/pkgs/desktops/gnome-3/misc/california/default.nix b/pkgs/desktops/gnome-3/misc/california/default.nix index b33488e34fce..73d3b555ba9f 100644 --- a/pkgs/desktops/gnome-3/misc/california/default.nix +++ b/pkgs/desktops/gnome-3/misc/california/default.nix @@ -12,17 +12,17 @@ stdenv.mkDerivation rec { sha256 = "1dky2kllv469k8966ilnf4xrr7z35pq8mdvs7kwziy59cdikapxj"; }; - propagatedUserEnvPkgs = [ gnome3.gnome_themes_standard ]; + propagatedUserEnvPkgs = [ gnome3.gnome-themes-standard ]; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ makeWrapper intltool vala_0_32 glib gtk3 gnome3.libgee - libsoup libgdata gnome3.gnome_online_accounts gnome3.evolution_data_server - sqlite itstool xdg_utils gnome3.gsettings_desktop_schemas ]; + libsoup libgdata gnome3.gnome-online-accounts gnome3.evolution-data-server + sqlite itstool xdg_utils gnome3.gsettings-desktop-schemas ]; preFixup = '' wrapProgram "$out/bin/california" \ --set GDK_PIXBUF_MODULE_FILE "$GDK_PIXBUF_MODULE_FILE" \ - --prefix XDG_DATA_DIRS : "$XDG_ICON_DIRS:${gnome3.defaultIconTheme}/share:${gnome3.gnome_themes_standard}/share:$out/share:$GSETTINGS_SCHEMAS_PATH:${gnome3.gsettings_desktop_schemas}/share" + --prefix XDG_DATA_DIRS : "$XDG_ICON_DIRS:${gnome3.defaultIconTheme}/share:${gnome3.gnome-themes-standard}/share:$out/share:$GSETTINGS_SCHEMAS_PATH:${gnome3.gsettings-desktop-schemas}/share" ''; enableParallelBuilding = true; diff --git a/pkgs/desktops/gnome-3/misc/geary/default.nix b/pkgs/desktops/gnome-3/misc/geary/default.nix index a912fb1c98b2..f8c296252617 100644 --- a/pkgs/desktops/gnome-3/misc/geary/default.nix +++ b/pkgs/desktops/gnome-3/misc/geary/default.nix @@ -1,8 +1,8 @@ { stdenv, fetchurl, intltool, pkgconfig, gtk3, vala_0_38, enchant -, wrapGAppsHook, gdk_pixbuf, cmake, desktop_file_utils -, libnotify, libcanberra_gtk3, libsecret, gmime +, wrapGAppsHook, gdk_pixbuf, cmake, desktop-file-utils +, libnotify, libcanberra-gtk3, libsecret, gmime , libpthreadstubs, sqlite -, gnome3, librsvg, gnome_doc_utils, webkitgtk }: +, gnome3, librsvg, gnome-doc-utils, webkitgtk }: let majorVersion = "0.12"; @@ -15,11 +15,11 @@ stdenv.mkDerivation rec { sha256 = "12hbpd5j3rb122nrsqmgsg31x82xl0ksm0nmsl614v1dd7crqnh6"; }; - propagatedUserEnvPkgs = [ gnome3.gnome_themes_standard ]; + propagatedUserEnvPkgs = [ gnome3.gnome-themes-standard ]; - nativeBuildInputs = [ vala_0_38 intltool pkgconfig wrapGAppsHook cmake desktop_file_utils gnome_doc_utils ]; - buildInputs = [ gtk3 enchant webkitgtk libnotify libcanberra_gtk3 gnome3.libgee libsecret gmime sqlite - libpthreadstubs gnome3.gsettings_desktop_schemas gnome3.gcr + nativeBuildInputs = [ vala_0_38 intltool pkgconfig wrapGAppsHook cmake desktop-file-utils gnome-doc-utils ]; + buildInputs = [ gtk3 enchant webkitgtk libnotify libcanberra-gtk3 gnome3.libgee libsecret gmime sqlite + libpthreadstubs gnome3.gsettings-desktop-schemas gnome3.gcr gdk_pixbuf librsvg gnome3.defaultIconTheme ]; preConfigure = '' diff --git a/pkgs/desktops/gnome-3/misc/gfbgraph/default.nix b/pkgs/desktops/gnome-3/misc/gfbgraph/default.nix index 364a52ee5cdf..779f21882e63 100644 --- a/pkgs/desktops/gnome-3/misc/gfbgraph/default.nix +++ b/pkgs/desktops/gnome-3/misc/gfbgraph/default.nix @@ -1,5 +1,5 @@ { stdenv, intltool, fetchurl, pkgconfig, glib -, gnome3, libsoup, json_glib }: +, gnome3, libsoup, json-glib }: stdenv.mkDerivation rec { name = "gfbgraph-0.2.3"; @@ -10,8 +10,8 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ glib gnome3.gnome_online_accounts ]; - propagatedBuildInputs = [ libsoup json_glib gnome3.rest ]; + buildInputs = [ glib gnome3.gnome-online-accounts ]; + propagatedBuildInputs = [ libsoup json-glib gnome3.rest ]; enableParallelBuilding = true; diff --git a/pkgs/desktops/gnome-3/misc/gitg/default.nix b/pkgs/desktops/gnome-3/misc/gitg/default.nix index 4180cd3b8ea1..314539b7f9e6 100644 --- a/pkgs/desktops/gnome-3/misc/gitg/default.nix +++ b/pkgs/desktops/gnome-3/misc/gitg/default.nix @@ -1,10 +1,20 @@ { stdenv, fetchurl, vala, intltool, pkgconfig, gtk3, glib -, json_glib, wrapGAppsHook, libpeas, bash, gobjectIntrospection -, gnome3, gtkspell3, shared_mime_info, libgee, libgit2-glib, librsvg, libsecret +, json-glib, wrapGAppsHook, libpeas, bash, gobjectIntrospection +, gnome3, gtkspell3, shared-mime-info, libgee, libgit2-glib, librsvg, libsecret , libsoup }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gitg-${version}"; + version = "3.26.0"; + + src = fetchurl { + url = "mirror://gnome/sources/gitg/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "26730d437d6a30d6e341b9e8da99d2134dce4b96022c195609f45062f82b54d5"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gitg"; }; + }; preCheck = '' substituteInPlace tests/libgitg/test-commit.c --replace "/bin/bash" "${bash}/bin/bash" @@ -13,11 +23,11 @@ stdenv.mkDerivation rec { makeFlags = "INTROSPECTION_GIRDIR=$(out)/share/gir-1.0/ INTROSPECTION_TYPELIBDIR=$(out)/lib/girepository-1.0"; - propagatedUserEnvPkgs = [ shared_mime_info - gnome3.gnome_themes_standard ]; + propagatedUserEnvPkgs = [ shared-mime-info + gnome3.gnome-themes-standard ]; - buildInputs = [ gtk3 glib json_glib libgee libpeas gnome3.libsoup - libgit2-glib gtkspell3 gnome3.gtksourceview gnome3.gsettings_desktop_schemas + buildInputs = [ gtk3 glib json-glib libgee libpeas gnome3.libsoup + libgit2-glib gtkspell3 gnome3.gtksourceview gnome3.gsettings-desktop-schemas librsvg libsecret gobjectIntrospection gnome3.adwaita-icon-theme ]; nativeBuildInputs = [ vala wrapGAppsHook intltool pkgconfig ]; diff --git a/pkgs/desktops/gnome-3/misc/gitg/src.nix b/pkgs/desktops/gnome-3/misc/gitg/src.nix deleted file mode 100644 index c72e2830ad1e..000000000000 --- a/pkgs/desktops/gnome-3/misc/gitg/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gitg-3.26.0"; - - src = fetchurl { - url = mirror://gnome/sources/gitg/3.26/gitg-3.26.0.tar.xz; - sha256 = "26730d437d6a30d6e341b9e8da99d2134dce4b96022c195609f45062f82b54d5"; - }; -} diff --git a/pkgs/desktops/gnome-3/misc/gnome-autoar/default.nix b/pkgs/desktops/gnome-3/misc/gnome-autoar/default.nix index 3a35a87ceafc..48c14461daa3 100644 --- a/pkgs/desktops/gnome-3/misc/gnome-autoar/default.nix +++ b/pkgs/desktops/gnome-3/misc/gnome-autoar/default.nix @@ -3,7 +3,17 @@ }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-autoar-${version}"; + version = "0.2.2"; + + src = fetchurl { + url = "mirror://gnome/sources/gnome-autoar/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "e1fe2c06eed30305c38bf0939c72b0e51b4716658e2663a0cf4a4bf57874ca62"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-autoar"; attrPath = "gnome3.gnome-autoar"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ gtk3 glib ]; diff --git a/pkgs/desktops/gnome-3/misc/gnome-autoar/src.nix b/pkgs/desktops/gnome-3/misc/gnome-autoar/src.nix deleted file mode 100644 index ee2ade83ee6c..000000000000 --- a/pkgs/desktops/gnome-3/misc/gnome-autoar/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-autoar-0.2.2"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-autoar/0.2/gnome-autoar-0.2.2.tar.xz; - sha256 = "e1fe2c06eed30305c38bf0939c72b0e51b4716658e2663a0cf4a4bf57874ca62"; - }; -} diff --git a/pkgs/desktops/gnome-3/misc/gnome-packagekit/default.nix b/pkgs/desktops/gnome-3/misc/gnome-packagekit/default.nix index cce734b474e4..ecc0711482fa 100644 --- a/pkgs/desktops/gnome-3/misc/gnome-packagekit/default.nix +++ b/pkgs/desktops/gnome-3/misc/gnome-packagekit/default.nix @@ -1,14 +1,24 @@ { stdenv, fetchurl, pkgconfig, meson, ninja, gettext, gnome3, libxslt, packagekit, polkit -, fontconfig, libcanberra_gtk3, systemd, libnotify, wrapGAppsHook, dbus_glib, dbus_libs, desktop_file_utils }: +, fontconfig, libcanberra-gtk3, systemd, libnotify, wrapGAppsHook, dbus-glib, dbus_libs, desktop-file-utils }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-packagekit-${version}"; + version = "3.26.0"; - NIX_CFLAGS_COMPILE = "-I${dbus_glib.dev}/include/dbus-1.0 -I${dbus_libs.dev}/include/dbus-1.0"; + src = fetchurl { + url = "mirror://gnome/sources/gnome-packagekit/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "6a219e16923d3976f424416c944bef06913922da24bc9e6644ec114c2d563417"; + }; - nativeBuildInputs = [ pkgconfig meson ninja gettext wrapGAppsHook desktop_file_utils ]; + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-packagekit"; attrPath = "gnome3.gnome-packagekit"; }; + }; + + NIX_CFLAGS_COMPILE = "-I${dbus-glib.dev}/include/dbus-1.0 -I${dbus_libs.dev}/include/dbus-1.0"; + + nativeBuildInputs = [ pkgconfig meson ninja gettext wrapGAppsHook desktop-file-utils ]; buildInputs = [ libxslt gnome3.gtk packagekit fontconfig systemd polkit - libcanberra_gtk3 libnotify dbus_glib dbus_libs ]; + libcanberra-gtk3 libnotify dbus-glib dbus_libs ]; prePatch = "patchShebangs meson_post_install.sh"; diff --git a/pkgs/desktops/gnome-3/misc/gnome-packagekit/src.nix b/pkgs/desktops/gnome-3/misc/gnome-packagekit/src.nix deleted file mode 100644 index 5448eb8a83a7..000000000000 --- a/pkgs/desktops/gnome-3/misc/gnome-packagekit/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-packagekit-3.26.0"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-packagekit/3.26/gnome-packagekit-3.26.0.tar.xz; - sha256 = "6a219e16923d3976f424416c944bef06913922da24bc9e6644ec114c2d563417"; - }; -} diff --git a/pkgs/desktops/gnome-3/misc/gnome-tweak-tool/default.nix b/pkgs/desktops/gnome-3/misc/gnome-tweak-tool/default.nix index 4e8eaffde435..35c3a678e843 100644 --- a/pkgs/desktops/gnome-3/misc/gnome-tweak-tool/default.nix +++ b/pkgs/desktops/gnome-3/misc/gnome-tweak-tool/default.nix @@ -4,19 +4,29 @@ , gnome3, librsvg, gdk_pixbuf, file, libnotify, gobjectIntrospection, wrapGAppsHook }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gnome-tweak-tool-${version}"; + version = "3.26.4"; - propagatedUserEnvPkgs = [ gnome3.gnome_themes_standard ]; + src = fetchurl { + url = "mirror://gnome/sources/gnome-tweak-tool/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "fda08044d22c258bbd93dbad326d282d4d1184b98795ae8e3e5f07f8275005df"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gnome-tweak-tool"; attrPath = "gnome3.gnome-tweak-tool"; }; + }; + + propagatedUserEnvPkgs = [ gnome3.gnome-themes-standard ]; nativeBuildInputs = [ meson ninja pkgconfig gettext itstool libxml2 file wrapGAppsHook ]; buildInputs = [ - gtk3 glib gnome3.gsettings_desktop_schemas + gtk3 glib gnome3.gsettings-desktop-schemas gdk_pixbuf gnome3.defaultIconTheme librsvg - libnotify gnome3.gnome_shell python3Packages.pygobject3 - libsoup gnome3.gnome_settings_daemon gnome3.nautilus - gnome3.mutter gnome3.gnome_desktop gobjectIntrospection + libnotify gnome3.gnome-shell python3Packages.pygobject3 + libsoup gnome3.gnome-settings-daemon gnome3.nautilus + gnome3.mutter gnome3.gnome-desktop gobjectIntrospection ]; postPatch = '' diff --git a/pkgs/desktops/gnome-3/misc/gnome-tweak-tool/src.nix b/pkgs/desktops/gnome-3/misc/gnome-tweak-tool/src.nix deleted file mode 100644 index 8af28e17dcd1..000000000000 --- a/pkgs/desktops/gnome-3/misc/gnome-tweak-tool/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gnome-tweak-tool-3.26.4"; - - src = fetchurl { - url = mirror://gnome/sources/gnome-tweak-tool/3.26/gnome-tweak-tool-3.26.4.tar.xz; - sha256 = "fda08044d22c258bbd93dbad326d282d4d1184b98795ae8e3e5f07f8275005df"; - }; -} diff --git a/pkgs/desktops/gnome-3/misc/gpaste/default.nix b/pkgs/desktops/gnome-3/misc/gpaste/default.nix index 3e1c897ffff9..aaedd6ef632d 100644 --- a/pkgs/desktops/gnome-3/misc/gpaste/default.nix +++ b/pkgs/desktops/gnome-3/misc/gpaste/default.nix @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ autoreconfHook pkgconfig vala wrapGAppsHook ]; buildInputs = [ glib gjs mutter gnome3.adwaita-icon-theme - gtk3 gnome3.gnome_control_center dbus + gtk3 gnome3.gnome-control-center dbus clutter pango appstream-glib systemd gobjectIntrospection ]; configureFlags = [ "--with-controlcenterdir=$(out)/share/gnome-control-center/keybindings" diff --git a/pkgs/desktops/gnome-3/misc/gspell/default.nix b/pkgs/desktops/gnome-3/misc/gspell/default.nix index 2bbf219e3f3a..5d2dc08e7e35 100644 --- a/pkgs/desktops/gnome-3/misc/gspell/default.nix +++ b/pkgs/desktops/gnome-3/misc/gspell/default.nix @@ -1,7 +1,17 @@ -{ stdenv, fetchurl, pkgconfig, glib, gtk3, enchant, isocodes, vala, gobjectIntrospection }: +{ stdenv, fetchurl, pkgconfig, glib, gtk3, enchant, isocodes, vala, gobjectIntrospection, gnome3 }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gspell-${version}"; + version = "1.6.1"; + + src = fetchurl { + url = "mirror://gnome/sources/gspell/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "f4d329348775374eec18158f8dcbbacf76f85be5ce002a92d93054ece70ec4de"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gspell"; attrPath = "gnome3.gspell"; }; + }; propagatedBuildInputs = [ enchant ]; # required for pkgconfig @@ -9,6 +19,10 @@ stdenv.mkDerivation rec { buildInputs = [ glib gtk3 isocodes ]; meta = with stdenv.lib; { + description = "A spell-checking library for GTK+ applications"; + homepage = https://wiki.gnome.org/Projects/gspell; + license = licenses.lgpl21Plus; + maintainers = gnome3.maintainers; platforms = platforms.linux; }; } diff --git a/pkgs/desktops/gnome-3/misc/gspell/src.nix b/pkgs/desktops/gnome-3/misc/gspell/src.nix deleted file mode 100644 index 9ae78f39e4e1..000000000000 --- a/pkgs/desktops/gnome-3/misc/gspell/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gspell-1.6.1"; - - src = fetchurl { - url = mirror://gnome/sources/gspell/1.6/gspell-1.6.1.tar.xz; - sha256 = "f4d329348775374eec18158f8dcbbacf76f85be5ce002a92d93054ece70ec4de"; - }; -} diff --git a/pkgs/desktops/gnome-3/misc/gtkhtml/default.nix b/pkgs/desktops/gnome-3/misc/gtkhtml/default.nix index 3f65ab36b0bb..1b912109cfd5 100644 --- a/pkgs/desktops/gnome-3/misc/gtkhtml/default.nix +++ b/pkgs/desktops/gnome-3/misc/gtkhtml/default.nix @@ -2,11 +2,21 @@ , gnome3, enchant, isocodes }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "gtkhtml-${version}"; + version = "4.10.0"; + + src = fetchurl { + url = "mirror://gnome/sources/gtkhtml/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "ca3b6424fb2c7ac5d9cb8fdafb69318fa2e825c9cf6ed17d1e38d9b29e5606c3"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "gtkhtml"; attrPath = "gnome3.gtkhtml"; }; + }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ gtk3 intltool gnome3.adwaita-icon-theme - gnome3.gsettings_desktop_schemas ]; + gnome3.gsettings-desktop-schemas ]; propagatedBuildInputs = [ enchant isocodes ]; diff --git a/pkgs/desktops/gnome-3/misc/gtkhtml/src.nix b/pkgs/desktops/gnome-3/misc/gtkhtml/src.nix deleted file mode 100644 index 21876ec9c399..000000000000 --- a/pkgs/desktops/gnome-3/misc/gtkhtml/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "gtkhtml-4.10.0"; - - src = fetchurl { - url = mirror://gnome/sources/gtkhtml/4.10/gtkhtml-4.10.0.tar.xz; - sha256 = "ca3b6424fb2c7ac5d9cb8fdafb69318fa2e825c9cf6ed17d1e38d9b29e5606c3"; - }; -} diff --git a/pkgs/desktops/gnome-3/misc/libgda/default.nix b/pkgs/desktops/gnome-3/misc/libgda/default.nix index edb34996867b..ce7bb6f75b5c 100644 --- a/pkgs/desktops/gnome-3/misc/libgda/default.nix +++ b/pkgs/desktops/gnome-3/misc/libgda/default.nix @@ -1,7 +1,23 @@ -{ stdenv, fetchurl, fetchpatch, pkgconfig, intltool, itstool, libxml2, gtk3, openssl }: +{ stdenv, fetchurl, fetchpatch, pkgconfig, intltool, itstool, libxml2, gtk3, openssl, gnome3 +, mysqlSupport ? false, mysql ? null +, postgresSupport ? false, postgresql ? null +}: + +assert mysqlSupport -> mysql != null; +assert postgresSupport -> postgresql != null; stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "libgda-${version}"; + version = "5.2.4"; + + src = fetchurl { + url = "mirror://gnome/sources/libgda/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "2cee38dd583ccbaa5bdf6c01ca5f88cc08758b9b144938a51a478eb2684b765e"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "libgda"; attrPath = "gnome3.libgda"; }; + }; patches = [ (fetchurl { @@ -11,21 +27,24 @@ stdenv.mkDerivation rec { }) ]; - configureFlags = [ - "--enable-gi-system-install=no" - ]; + configureFlags = with stdenv.lib; [ "--enable-gi-system-install=no" ] + ++ (optional (mysqlSupport) "--with-mysql=yes") + ++ (optional (postgresSupport) "--with-postgres=yes"); enableParallelBuilding = true; hardeningDisable = [ "format" ]; - nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ intltool itstool libxml2 gtk3 openssl ]; + nativeBuildInputs = [ pkgconfig intltool itstool libxml2 ]; + buildInputs = with stdenv.lib; [ gtk3 openssl ] + ++ optional (mysqlSupport) mysql.connector-c + ++ optional (postgresSupport) postgresql; meta = with stdenv.lib; { description = "Database access library"; homepage = http://www.gnome-db.org/; license = [ licenses.lgpl2 licenses.gpl2 ]; + maintainers = gnome3.maintainers; platforms = platforms.linux; }; } diff --git a/pkgs/desktops/gnome-3/misc/libgda/src.nix b/pkgs/desktops/gnome-3/misc/libgda/src.nix deleted file mode 100644 index 8812ccc8ccd9..000000000000 --- a/pkgs/desktops/gnome-3/misc/libgda/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "libgda-5.2.4"; - - src = fetchurl { - url = mirror://gnome/sources/libgda/5.2/libgda-5.2.4.tar.xz; - sha256 = "2cee38dd583ccbaa5bdf6c01ca5f88cc08758b9b144938a51a478eb2684b765e"; - }; -} diff --git a/pkgs/desktops/gnome-3/misc/libgit2-glib/default.nix b/pkgs/desktops/gnome-3/misc/libgit2-glib/default.nix index 3c9652de4990..865586b51192 100644 --- a/pkgs/desktops/gnome-3/misc/libgit2-glib/default.nix +++ b/pkgs/desktops/gnome-3/misc/libgit2-glib/default.nix @@ -1,11 +1,21 @@ { stdenv, fetchurl, gnome3, libtool, pkgconfig, vala, libssh2 -, gtk_doc, gobjectIntrospection, libgit2, glib }: +, gtk-doc, gobjectIntrospection, libgit2, glib }: stdenv.mkDerivation rec { - inherit (import ./src.nix fetchurl) name src; + name = "libgit2-glib-${version}"; + version = "0.26.2"; + + src = fetchurl { + url = "mirror://gnome/sources/libgit2-glib/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "2ad6f20db2e38bbfdb6cb452704fe8a911036b86de82dc75bb0f3b20db40ce9c"; + }; + + passthru = { + updateScript = gnome3.updateScript { packageName = "libgit2-glib"; attrPath = "gnome3.libgit2-glib"; }; + }; nativeBuildInputs = [ - gnome3.gnome_common libtool pkgconfig vala gtk_doc gobjectIntrospection + gnome3.gnome-common libtool pkgconfig vala gtk-doc gobjectIntrospection ]; propagatedBuildInputs = [ @@ -16,6 +26,10 @@ stdenv.mkDerivation rec { buildInputs = [ libssh2 ]; meta = with stdenv.lib; { + description = "A glib wrapper library around the libgit2 git access library"; + homepage = https://wiki.gnome.org/Projects/Libgit2-glib; + license = licenses.lgpl21; + maintainers = gnome3.maintainers; platforms = platforms.linux; }; } diff --git a/pkgs/desktops/gnome-3/misc/libgit2-glib/src.nix b/pkgs/desktops/gnome-3/misc/libgit2-glib/src.nix deleted file mode 100644 index d233dc3a4015..000000000000 --- a/pkgs/desktops/gnome-3/misc/libgit2-glib/src.nix +++ /dev/null @@ -1,10 +0,0 @@ -# Autogenerated by maintainers/scripts/gnome.sh update - -fetchurl: { - name = "libgit2-glib-0.26.2"; - - src = fetchurl { - url = mirror://gnome/sources/libgit2-glib/0.26/libgit2-glib-0.26.2.tar.xz; - sha256 = "2ad6f20db2e38bbfdb6cb452704fe8a911036b86de82dc75bb0f3b20db40ce9c"; - }; -} diff --git a/pkgs/desktops/gnome-3/misc/pomodoro/default.nix b/pkgs/desktops/gnome-3/misc/pomodoro/default.nix index 5634d2a48d54..82e56d3f96c4 100644 --- a/pkgs/desktops/gnome-3/misc/pomodoro/default.nix +++ b/pkgs/desktops/gnome-3/misc/pomodoro/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub, autoconf-archive, appstream-glib, intltool, pkgconfig, libtool, wrapGAppsHook, - dbus_glib, libcanberra, gst_all_1, vala, gnome3, gtk3, libxml2, autoreconfHook, + dbus-glib, libcanberra, gst_all_1, vala, gnome3, gtk3, libxml2, autoreconfHook, glib, gobjectIntrospection, libpeas }: @@ -21,10 +21,10 @@ stdenv.mkDerivation rec { buildInputs = [ glib gobjectIntrospection libpeas - dbus_glib libcanberra gst_all_1.gstreamer + dbus-glib libcanberra gst_all_1.gstreamer gst_all_1.gst-plugins-base gst_all_1.gst-plugins-good - gnome3.gsettings_desktop_schemas - gnome3.gnome_shell gtk3 gnome3.defaultIconTheme + gnome3.gsettings-desktop-schemas + gnome3.gnome-shell gtk3 gnome3.defaultIconTheme ]; meta = with stdenv.lib; { diff --git a/pkgs/desktops/gnome-3/update.nix b/pkgs/desktops/gnome-3/update.nix new file mode 100644 index 000000000000..b7a6ce16d11f --- /dev/null +++ b/pkgs/desktops/gnome-3/update.nix @@ -0,0 +1,11 @@ +{ lib, writeScript, python3, common-updater-scripts, coreutils, gnugrep, gnused }: +{ packageName, attrPath ? packageName, versionPolicy ? "odd-unstable" }: + +let + python = python3.withPackages (p: [ p.requests ]); +in writeScript "update-${packageName}" '' + set -o errexit + PATH=${lib.makeBinPath [ common-updater-scripts coreutils gnugrep gnused python ]} + latest_tag=$(python "${./find-latest-version.py}" "${packageName}" "${versionPolicy}" "stable") + update-source-version "${attrPath}" "$latest_tag" +'' diff --git a/pkgs/desktops/lumina/default.nix b/pkgs/desktops/lumina/default.nix index da33999087ed..0ada9af3b5e0 100644 --- a/pkgs/desktops/lumina/default.nix +++ b/pkgs/desktops/lumina/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, fluxbox, xscreensaver, desktop_file_utils, +{ stdenv, fetchFromGitHub, fluxbox, xscreensaver, desktop-file-utils, numlockx, xorg, qtbase, qtsvg, qtmultimedia, qtx11extras, qmake, qttools, poppler_qt5, wrapGAppsHook }: @@ -31,7 +31,7 @@ stdenv.mkDerivation rec { poppler_qt5 fluxbox xscreensaver - desktop_file_utils + desktop-file-utils numlockx ]; diff --git a/pkgs/desktops/lxqt/optional/obconf-qt/default.nix b/pkgs/desktops/lxqt/optional/obconf-qt/default.nix index e3cb02e8b8af..c40b9c4e9f94 100644 --- a/pkgs/desktops/lxqt/optional/obconf-qt/default.nix +++ b/pkgs/desktops/lxqt/optional/obconf-qt/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, cmake, pkgconfig, pcre, qt5, xorg, lxqt, openbox, hicolor_icon_theme }: +{ stdenv, fetchFromGitHub, cmake, pkgconfig, pcre, qt5, xorg, lxqt, openbox, hicolor-icon-theme }: stdenv.mkDerivation rec { name = "${pname}-${version}"; @@ -27,7 +27,7 @@ stdenv.mkDerivation rec { xorg.libXdmcp xorg.libSM openbox - hicolor_icon_theme + hicolor-icon-theme ]; cmakeFlags = [ "-DPULL_TRANSLATIONS=NO" ]; diff --git a/pkgs/desktops/mate/atril/default.nix b/pkgs/desktops/mate/atril/default.nix index c6607dad2902..05b9d966fc43 100644 --- a/pkgs/desktops/mate/atril/default.nix +++ b/pkgs/desktops/mate/atril/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, intltool, gtk3, libxml2, libsecret, poppler, itstool, hicolor_icon_theme, mate, wrapGAppsHook }: +{ stdenv, fetchurl, pkgconfig, intltool, gtk3, libxml2, libsecret, poppler, itstool, hicolor-icon-theme, mate, wrapGAppsHook }: stdenv.mkDerivation rec { name = "atril-${version}"; @@ -23,7 +23,7 @@ stdenv.mkDerivation rec { poppler mate.caja mate.mate-desktop - hicolor_icon_theme + hicolor-icon-theme ]; makeFlags = [ "cajaextensiondir=$$out/lib/caja/extensions-2.0" ]; diff --git a/pkgs/desktops/mate/caja-extensions/default.nix b/pkgs/desktops/mate/caja-extensions/default.nix index 1aef8d3d184f..3383847f16c6 100644 --- a/pkgs/desktops/mate/caja-extensions/default.nix +++ b/pkgs/desktops/mate/caja-extensions/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, intltool, gtk3, dbus_glib, gupnp, mate, imagemagick, wrapGAppsHook }: +{ stdenv, fetchurl, pkgconfig, intltool, gtk3, dbus-glib, gupnp, mate, imagemagick, wrapGAppsHook }: stdenv.mkDerivation rec { name = "caja-extensions-${version}"; @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { buildInputs = [ gtk3 - dbus_glib + dbus-glib gupnp mate.caja mate.mate-desktop diff --git a/pkgs/desktops/mate/caja/default.nix b/pkgs/desktops/mate/caja/default.nix index a80f89feff29..070808504d14 100644 --- a/pkgs/desktops/mate/caja/default.nix +++ b/pkgs/desktops/mate/caja/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, intltool, gtk3, libnotify, libxml2, libexif, exempi, mate, hicolor_icon_theme, wrapGAppsHook }: +{ stdenv, fetchurl, pkgconfig, intltool, gtk3, libnotify, libxml2, libexif, exempi, mate, hicolor-icon-theme, wrapGAppsHook }: stdenv.mkDerivation rec { name = "caja-${version}"; @@ -22,7 +22,7 @@ stdenv.mkDerivation rec { libexif exempi mate.mate-desktop - hicolor_icon_theme + hicolor-icon-theme ]; patches = [ diff --git a/pkgs/desktops/mate/engrampa/default.nix b/pkgs/desktops/mate/engrampa/default.nix index 8e46102cf5a6..74d32ce1f216 100644 --- a/pkgs/desktops/mate/engrampa/default.nix +++ b/pkgs/desktops/mate/engrampa/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, intltool, itstool, libxml2, gnome3, mate, hicolor_icon_theme, wrapGAppsHook }: +{ stdenv, fetchurl, pkgconfig, intltool, itstool, libxml2, gnome3, mate, hicolor-icon-theme, wrapGAppsHook }: stdenv.mkDerivation rec { name = "engrampa-${version}"; @@ -20,7 +20,7 @@ stdenv.mkDerivation rec { libxml2 gnome3.gtk mate.caja - hicolor_icon_theme + hicolor-icon-theme mate.mate-desktop ]; diff --git a/pkgs/desktops/mate/eom/default.nix b/pkgs/desktops/mate/eom/default.nix index c3af73282e5c..23e167412919 100644 --- a/pkgs/desktops/mate/eom/default.nix +++ b/pkgs/desktops/mate/eom/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, intltool, itstool, dbus_glib, exempi, lcms2, libexif, libjpeg, librsvg, libxml2, shared_mime_info, gnome3, mate, hicolor_icon_theme, wrapGAppsHook }: +{ stdenv, fetchurl, pkgconfig, intltool, itstool, dbus-glib, exempi, lcms2, libexif, libjpeg, librsvg, libxml2, shared-mime-info, gnome3, mate, hicolor-icon-theme, wrapGAppsHook }: stdenv.mkDerivation rec { name = "eom-${version}"; @@ -17,18 +17,18 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - dbus_glib + dbus-glib exempi lcms2 libexif libjpeg librsvg libxml2 - shared_mime_info + shared-mime-info gnome3.gtk gnome3.libpeas mate.mate-desktop - hicolor_icon_theme + hicolor-icon-theme ]; meta = { diff --git a/pkgs/desktops/mate/marco/default.nix b/pkgs/desktops/mate/marco/default.nix index 9a926b78c3d7..e5a544ae33e5 100644 --- a/pkgs/desktops/mate/marco/default.nix +++ b/pkgs/desktops/mate/marco/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, intltool, itstool, libxml2, libcanberra_gtk3, libgtop, gnome2, gnome3, mate, wrapGAppsHook }: +{ stdenv, fetchurl, pkgconfig, intltool, itstool, libxml2, libcanberra-gtk3, libgtop, gnome2, gnome3, mate, wrapGAppsHook }: stdenv.mkDerivation rec { name = "marco-${version}"; @@ -18,7 +18,7 @@ stdenv.mkDerivation rec { buildInputs = [ libxml2 - libcanberra_gtk3 + libcanberra-gtk3 libgtop gnome2.startup_notification gnome3.gtk diff --git a/pkgs/desktops/mate/mate-applets/default.nix b/pkgs/desktops/mate/mate-applets/default.nix index f56d594303c9..0be643c97189 100644 --- a/pkgs/desktops/mate/mate-applets/default.nix +++ b/pkgs/desktops/mate/mate-applets/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, intltool, itstool, gnome3, libwnck3, libgtop, libxml2, libnotify, dbus_glib, polkit, upower, wirelesstools, mate, hicolor_icon_theme, wrapGAppsHook }: +{ stdenv, fetchurl, pkgconfig, intltool, itstool, gnome3, libwnck3, libgtop, libxml2, libnotify, dbus-glib, polkit, upower, wirelesstools, mate, hicolor-icon-theme, wrapGAppsHook }: stdenv.mkDerivation rec { name = "mate-applets-${version}"; @@ -29,7 +29,7 @@ stdenv.mkDerivation rec { wirelesstools mate.libmateweather mate.mate-panel - hicolor_icon_theme + hicolor-icon-theme ]; configureFlags = [ "--enable-suid=no" ]; diff --git a/pkgs/desktops/mate/mate-control-center/default.nix b/pkgs/desktops/mate/mate-control-center/default.nix index e9b789bdc4e9..fdee351aeed5 100644 --- a/pkgs/desktops/mate/mate-control-center/default.nix +++ b/pkgs/desktops/mate/mate-control-center/default.nix @@ -1,6 +1,6 @@ -{ stdenv, fetchurl, pkgconfig, intltool, itstool, libxml2, dbus_glib, - libxklavier, libcanberra_gtk3, librsvg, libappindicator-gtk3, - desktop_file_utils, gnome3, mate, hicolor_icon_theme, wrapGAppsHook +{ stdenv, fetchurl, pkgconfig, intltool, itstool, libxml2, dbus-glib, + libxklavier, libcanberra-gtk3, librsvg, libappindicator-gtk3, + desktop-file-utils, gnome3, mate, hicolor-icon-theme, wrapGAppsHook }: stdenv.mkDerivation rec { @@ -16,20 +16,20 @@ stdenv.mkDerivation rec { pkgconfig intltool itstool - desktop_file_utils + desktop-file-utils wrapGAppsHook ]; buildInputs = [ libxml2 - dbus_glib + dbus-glib libxklavier - libcanberra_gtk3 + libcanberra-gtk3 librsvg libappindicator-gtk3 gnome3.gtk gnome3.dconf - hicolor_icon_theme + hicolor-icon-theme mate.mate-desktop mate.libmatekbd mate.mate-menus diff --git a/pkgs/desktops/mate/mate-icon-theme-faenza/default.nix b/pkgs/desktops/mate/mate-icon-theme-faenza/default.nix index 6e1f9778e313..2d868d2e0821 100644 --- a/pkgs/desktops/mate/mate-icon-theme-faenza/default.nix +++ b/pkgs/desktops/mate/mate-icon-theme-faenza/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, autoreconfHook, mate, hicolor_icon_theme }: +{ stdenv, fetchurl, autoreconfHook, mate, hicolor-icon-theme }: stdenv.mkDerivation rec { name = "mate-icon-theme-faenza-${version}"; @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ autoreconfHook ]; - buildInputs = [ mate.mate-icon-theme hicolor_icon_theme ]; + buildInputs = [ mate.mate-icon-theme hicolor-icon-theme ]; meta = { description = "Faenza icon theme from MATE"; diff --git a/pkgs/desktops/mate/mate-icon-theme/default.nix b/pkgs/desktops/mate/mate-icon-theme/default.nix index a42116a63af5..93ad93b07b98 100644 --- a/pkgs/desktops/mate/mate-icon-theme/default.nix +++ b/pkgs/desktops/mate/mate-icon-theme/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, intltool, iconnamingutils, librsvg, hicolor_icon_theme, gtk3, mate }: +{ stdenv, fetchurl, pkgconfig, intltool, iconnamingutils, librsvg, hicolor-icon-theme, gtk3, mate }: stdenv.mkDerivation rec { name = "mate-icon-theme-${version}"; @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig intltool iconnamingutils ]; - buildInputs = [ librsvg hicolor_icon_theme ]; + buildInputs = [ librsvg hicolor-icon-theme ]; postInstall = '' for theme in "$out"/share/icons/*; do diff --git a/pkgs/desktops/mate/mate-indicator-applet/default.nix b/pkgs/desktops/mate/mate-indicator-applet/default.nix index 4ff636c3c734..512327c06208 100644 --- a/pkgs/desktops/mate/mate-indicator-applet/default.nix +++ b/pkgs/desktops/mate/mate-indicator-applet/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, intltool, gtk3, libindicator-gtk3, mate, hicolor_icon_theme, wrapGAppsHook }: +{ stdenv, fetchurl, pkgconfig, intltool, gtk3, libindicator-gtk3, mate, hicolor-icon-theme, wrapGAppsHook }: stdenv.mkDerivation rec { name = "mate-indicator-applet-${version}"; @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { gtk3 libindicator-gtk3 mate.mate-panel - hicolor_icon_theme + hicolor-icon-theme ]; meta = with stdenv.lib; { diff --git a/pkgs/desktops/mate/mate-media/default.nix b/pkgs/desktops/mate/mate-media/default.nix index f4ee94b4bd37..514da3a11724 100644 --- a/pkgs/desktops/mate/mate-media/default.nix +++ b/pkgs/desktops/mate/mate-media/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, intltool, libtool, libxml2, libcanberra_gtk3, gnome3, mate, wrapGAppsHook }: +{ stdenv, fetchurl, pkgconfig, intltool, libtool, libxml2, libcanberra-gtk3, gnome3, mate, wrapGAppsHook }: stdenv.mkDerivation rec { name = "mate-media-${version}"; @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { buildInputs = [ libxml2 - libcanberra_gtk3 + libcanberra-gtk3 gnome3.gtk mate.libmatemixer mate.mate-desktop diff --git a/pkgs/desktops/mate/mate-notification-daemon/default.nix b/pkgs/desktops/mate/mate-notification-daemon/default.nix index 53b441a293a6..59df2b7d59bd 100644 --- a/pkgs/desktops/mate/mate-notification-daemon/default.nix +++ b/pkgs/desktops/mate/mate-notification-daemon/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, intltool, dbus_glib, libcanberra_gtk3, +{ stdenv, fetchurl, pkgconfig, intltool, dbus-glib, libcanberra-gtk3, libnotify, libwnck3, gnome3, mate, wrapGAppsHook }: stdenv.mkDerivation rec { @@ -17,8 +17,8 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - dbus_glib - libcanberra_gtk3 + dbus-glib + libcanberra-gtk3 libnotify libwnck3 gnome3.gtk diff --git a/pkgs/desktops/mate/mate-panel/default.nix b/pkgs/desktops/mate/mate-panel/default.nix index b05a9a68af04..0adcb58758c3 100644 --- a/pkgs/desktops/mate/mate-panel/default.nix +++ b/pkgs/desktops/mate/mate-panel/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, intltool, itstool, glib, dbus_glib, libwnck3, librsvg, libxml2, gnome3, mate, hicolor_icon_theme, wrapGAppsHook }: +{ stdenv, fetchurl, pkgconfig, intltool, itstool, glib, dbus-glib, libwnck3, librsvg, libxml2, gnome3, mate, hicolor-icon-theme, wrapGAppsHook }: stdenv.mkDerivation rec { name = "mate-panel-${version}"; @@ -18,7 +18,7 @@ stdenv.mkDerivation rec { buildInputs = [ glib - dbus_glib + dbus-glib libwnck3 librsvg libxml2 @@ -27,7 +27,7 @@ stdenv.mkDerivation rec { mate.libmateweather mate.mate-desktop mate.mate-menus - hicolor_icon_theme + hicolor-icon-theme ]; NIX_CFLAGS_COMPILE = "-I${glib.dev}/include/gio-unix-2.0"; diff --git a/pkgs/desktops/mate/mate-power-manager/default.nix b/pkgs/desktops/mate/mate-power-manager/default.nix index df38485fbc75..ddde6acf0e0e 100644 --- a/pkgs/desktops/mate/mate-power-manager/default.nix +++ b/pkgs/desktops/mate/mate-power-manager/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, intltool, glib, itstool, libxml2, mate, libnotify, libcanberra_gtk3, dbus_glib, upower, gnome3, libtool, wrapGAppsHook }: +{ stdenv, fetchurl, pkgconfig, intltool, glib, itstool, libxml2, mate, libnotify, libcanberra-gtk3, dbus-glib, upower, gnome3, libtool, wrapGAppsHook }: stdenv.mkDerivation rec { name = "mate-power-manager-${version}"; @@ -13,11 +13,11 @@ stdenv.mkDerivation rec { glib itstool libxml2 - libcanberra_gtk3 + libcanberra-gtk3 gnome3.gtk - gnome3.libgnome_keyring + gnome3.libgnome-keyring libnotify - dbus_glib + dbus-glib upower mate.mate-panel ]; diff --git a/pkgs/desktops/mate/mate-screensaver/default.nix b/pkgs/desktops/mate/mate-screensaver/default.nix index e1ae6b4ae1dc..3b5d303816ba 100644 --- a/pkgs/desktops/mate/mate-screensaver/default.nix +++ b/pkgs/desktops/mate/mate-screensaver/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, intltool, gtk3, dbus_glib, libXScrnSaver, libnotify, pam, systemd, mate, wrapGAppsHook }: +{ stdenv, fetchurl, pkgconfig, intltool, gtk3, dbus-glib, libXScrnSaver, libnotify, pam, systemd, mate, wrapGAppsHook }: stdenv.mkDerivation rec { name = "mate-screensaver-${version}"; @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { buildInputs = [ gtk3 - dbus_glib + dbus-glib libXScrnSaver libnotify pam diff --git a/pkgs/desktops/mate/mate-sensors-applet/default.nix b/pkgs/desktops/mate/mate-sensors-applet/default.nix index 130db2420ef1..dfd3766df297 100644 --- a/pkgs/desktops/mate/mate-sensors-applet/default.nix +++ b/pkgs/desktops/mate/mate-sensors-applet/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, intltool, itstool, gtk3, libxml2, libxslt, libatasmart, libnotify, dbus_glib, lm_sensors, mate, hicolor_icon_theme, wrapGAppsHook }: +{ stdenv, fetchurl, pkgconfig, intltool, itstool, gtk3, libxml2, libxslt, libatasmart, libnotify, dbus-glib, lm_sensors, mate, hicolor-icon-theme, wrapGAppsHook }: stdenv.mkDerivation rec { name = "mate-sensors-applet-${version}"; @@ -23,10 +23,10 @@ stdenv.mkDerivation rec { libxslt libatasmart libnotify - dbus_glib + dbus-glib lm_sensors mate.mate-panel - hicolor_icon_theme + hicolor-icon-theme ]; meta = with stdenv.lib; { diff --git a/pkgs/desktops/mate/mate-session-manager/default.nix b/pkgs/desktops/mate/mate-session-manager/default.nix index d154b80263c6..97c80cdc2e4e 100644 --- a/pkgs/desktops/mate/mate-session-manager/default.nix +++ b/pkgs/desktops/mate/mate-session-manager/default.nix @@ -1,5 +1,5 @@ -{ stdenv, fetchurl, pkgconfig, intltool, xtrans, dbus_glib, systemd, - libSM, libXtst, gtk3, hicolor_icon_theme, mate, +{ stdenv, fetchurl, pkgconfig, intltool, xtrans, dbus-glib, systemd, + libSM, libXtst, gtk3, hicolor-icon-theme, mate, wrapGAppsHook }: @@ -20,13 +20,13 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - dbus_glib + dbus-glib systemd libSM libXtst gtk3 mate.mate-desktop - hicolor_icon_theme + hicolor-icon-theme ]; meta = with stdenv.lib; { diff --git a/pkgs/desktops/mate/mate-settings-daemon/default.nix b/pkgs/desktops/mate/mate-settings-daemon/default.nix index dc1272115b8e..b97b5294d39b 100644 --- a/pkgs/desktops/mate/mate-settings-daemon/default.nix +++ b/pkgs/desktops/mate/mate-settings-daemon/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, intltool, glib, dbus_glib, libxklavier, libcanberra_gtk3, libnotify, nss, polkit, gnome3, mate, wrapGAppsHook +{ stdenv, fetchurl, pkgconfig, intltool, glib, dbus-glib, libxklavier, libcanberra-gtk3, libnotify, nss, polkit, gnome3, mate, wrapGAppsHook , pulseaudioSupport ? stdenv.config.pulseaudio or true, libpulseaudio }: @@ -18,9 +18,9 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - dbus_glib + dbus-glib libxklavier - libcanberra_gtk3 + libcanberra-gtk3 libnotify nss polkit diff --git a/pkgs/desktops/mate/mate-user-share/default.nix b/pkgs/desktops/mate/mate-user-share/default.nix index f5393cad0b88..23123fd2db1a 100644 --- a/pkgs/desktops/mate/mate-user-share/default.nix +++ b/pkgs/desktops/mate/mate-user-share/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, intltool, itstool, gtk3, dbus_glib, libnotify, libxml2, libcanberra_gtk3, mod_dnssd, apacheHttpd, hicolor_icon_theme, mate, wrapGAppsHook }: +{ stdenv, fetchurl, pkgconfig, intltool, itstool, gtk3, dbus-glib, libnotify, libxml2, libcanberra-gtk3, mod_dnssd, apacheHttpd, hicolor-icon-theme, mate, wrapGAppsHook }: stdenv.mkDerivation rec { name = "mate-user-share-${version}"; @@ -18,12 +18,12 @@ stdenv.mkDerivation rec { buildInputs = [ gtk3 - dbus_glib + dbus-glib libnotify - libcanberra_gtk3 + libcanberra-gtk3 libxml2 mate.caja - hicolor_icon_theme + hicolor-icon-theme # Should mod_dnssd and apacheHttpd be runtime dependencies? # In gnome-user-share they are not. #mod_dnssd diff --git a/pkgs/desktops/mate/mate-utils/default.nix b/pkgs/desktops/mate/mate-utils/default.nix index 946dc3efd253..f96eecb0a4e6 100644 --- a/pkgs/desktops/mate/mate-utils/default.nix +++ b/pkgs/desktops/mate/mate-utils/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, intltool, itstool, gtk3, libxml2, libgtop, libcanberra_gtk3, mate, hicolor_icon_theme, wrapGAppsHook }: +{ stdenv, fetchurl, pkgconfig, intltool, itstool, gtk3, libxml2, libgtop, libcanberra-gtk3, mate, hicolor-icon-theme, wrapGAppsHook }: stdenv.mkDerivation rec { name = "mate-utils-${version}"; @@ -19,10 +19,10 @@ stdenv.mkDerivation rec { buildInputs = [ gtk3 libgtop - libcanberra_gtk3 + libcanberra-gtk3 libxml2 mate.mate-panel - hicolor_icon_theme + hicolor-icon-theme ]; meta = with stdenv.lib; { diff --git a/pkgs/desktops/pantheon/apps/pantheon-terminal/default.nix b/pkgs/desktops/pantheon/apps/pantheon-terminal/default.nix index 13a34f90fcdd..22e790784d57 100644 --- a/pkgs/desktops/pantheon/apps/pantheon-terminal/default.nix +++ b/pkgs/desktops/pantheon/apps/pantheon-terminal/default.nix @@ -27,7 +27,7 @@ stdenv.mkDerivation rec { ]; buildInputs = with gnome3; [ glib gtk3 granite libnotify gettext vte_290 libgee - gsettings_desktop_schemas defaultIconTheme + gsettings-desktop-schemas defaultIconTheme ]; meta = { description = "Elementary OS's terminal"; diff --git a/pkgs/desktops/plasma-5/bluedevil.nix b/pkgs/desktops/plasma-5/bluedevil.nix index 44e8a26eee15..4be84589080c 100644 --- a/pkgs/desktops/plasma-5/bluedevil.nix +++ b/pkgs/desktops/plasma-5/bluedevil.nix @@ -1,12 +1,12 @@ { - mkDerivation, extra-cmake-modules, shared_mime_info, + mkDerivation, extra-cmake-modules, shared-mime-info, bluez-qt, kcoreaddons, kdbusaddons, kded, ki18n, kiconthemes, kio, knotifications, kwidgetsaddons, kwindowsystem, plasma-framework, qtdeclarative }: mkDerivation { name = "bluedevil"; - nativeBuildInputs = [ extra-cmake-modules shared_mime_info ]; + nativeBuildInputs = [ extra-cmake-modules shared-mime-info ]; buildInputs = [ bluez-qt ki18n kio kwindowsystem plasma-framework qtdeclarative kcoreaddons kdbusaddons kded kiconthemes knotifications kwidgetsaddons diff --git a/pkgs/desktops/plasma-5/default.nix b/pkgs/desktops/plasma-5/default.nix index baa4b028d013..6da0ad22d115 100644 --- a/pkgs/desktops/plasma-5/default.nix +++ b/pkgs/desktops/plasma-5/default.nix @@ -26,7 +26,7 @@ existing packages here and modify it as necessary. { libsForQt5, lib, fetchurl, - gconf, gsettings_desktop_schemas, + gconf, gsettings-desktop-schemas, debug ? false, }: @@ -105,7 +105,7 @@ let breeze-plymouth = callPackage ./breeze-plymouth {}; kactivitymanagerd = callPackage ./kactivitymanagerd.nix {}; kde-cli-tools = callPackage ./kde-cli-tools.nix {}; - kde-gtk-config = callPackage ./kde-gtk-config { inherit gsettings_desktop_schemas; }; + kde-gtk-config = callPackage ./kde-gtk-config { inherit gsettings-desktop-schemas; }; kdecoration = callPackage ./kdecoration.nix {}; kdeplasma-addons = callPackage ./kdeplasma-addons.nix {}; kgamma5 = callPackage ./kgamma5.nix {}; @@ -135,6 +135,8 @@ let powerdevil = callPackage ./powerdevil.nix {}; sddm-kcm = callPackage ./sddm-kcm.nix {}; systemsettings = callPackage ./systemsettings.nix {}; + user-manager = callPackage ./user-manager.nix {}; + xdg-desktop-portal-kde = callPackage ./xdg-desktop-portal-kde.nix {}; }; in lib.makeScope libsForQt5.newScope packages diff --git a/pkgs/desktops/plasma-5/kde-gtk-config/default.nix b/pkgs/desktops/plasma-5/kde-gtk-config/default.nix index f792f3b939f4..35d90a246bc6 100644 --- a/pkgs/desktops/plasma-5/kde-gtk-config/default.nix +++ b/pkgs/desktops/plasma-5/kde-gtk-config/default.nix @@ -2,7 +2,7 @@ mkDerivation, extra-cmake-modules, glib, gtk2, gtk3, karchive, kcmutils, kconfigwidgets, ki18n, kiconthemes, kio, - knewstuff, gsettings_desktop_schemas + knewstuff, gsettings-desktop-schemas }: mkDerivation { @@ -10,12 +10,12 @@ mkDerivation { nativeBuildInputs = [ extra-cmake-modules ]; buildInputs = [ ki18n kio glib gtk2 gtk3 karchive kcmutils kconfigwidgets kiconthemes - knewstuff gsettings_desktop_schemas + knewstuff gsettings-desktop-schemas ]; patches = [ ./0001-follow-symlinks.patch ]; cmakeFlags = [ "-DGTK2_GLIBCONFIG_INCLUDE_DIR=${glib.out}/lib/glib-2.0/include" "-DGTK2_GDKCONFIG_INCLUDE_DIR=${gtk2.out}/lib/gtk-2.0/include" - "-DGLIB_SCHEMAS_DIR=${gsettings_desktop_schemas.out}/" + "-DGLIB_SCHEMAS_DIR=${gsettings-desktop-schemas.out}/" ]; } diff --git a/pkgs/desktops/plasma-5/plasma-nm/0001-mobile-broadband-provider-info-path.patch b/pkgs/desktops/plasma-5/plasma-nm/0001-mobile-broadband-provider-info-path.patch index 79b5cfb437e2..75144d352223 100644 --- a/pkgs/desktops/plasma-5/plasma-nm/0001-mobile-broadband-provider-info-path.patch +++ b/pkgs/desktops/plasma-5/plasma-nm/0001-mobile-broadband-provider-info-path.patch @@ -16,7 +16,7 @@ index 568cb34..98a5992 100644 #include -const QString MobileProviders::ProvidersFile = "/usr/share/mobile-broadband-provider-info/serviceproviders.xml"; -+const QString MobileProviders::ProvidersFile = "@mobile_broadband_provider_info@/share/mobile-broadband-provider-info/serviceproviders.xml"; ++const QString MobileProviders::ProvidersFile = "@mobile-broadband-provider-info@/share/mobile-broadband-provider-info/serviceproviders.xml"; bool localeAwareCompare(const QString & one, const QString & two) { return one.localeAwareCompare(two) < 0; diff --git a/pkgs/desktops/plasma-5/plasma-nm/default.nix b/pkgs/desktops/plasma-5/plasma-nm/default.nix index cc1dcb7ee9f7..214dbd9cc042 100644 --- a/pkgs/desktops/plasma-5/plasma-nm/default.nix +++ b/pkgs/desktops/plasma-5/plasma-nm/default.nix @@ -4,7 +4,7 @@ kcompletion, kconfigwidgets, kcoreaddons, kdbusaddons, kdeclarative, kdelibs4support, ki18n, kiconthemes, kinit, kio, kitemviews, knotifications, kservice, kwallet, kwidgetsaddons, kwindowsystem, kxmlgui, - mobile_broadband_provider_info, modemmanager-qt, networkmanager-qt, + mobile-broadband-provider-info, modemmanager-qt, networkmanager-qt, openconnect, openvpn, plasma-framework, qca-qt5, qtdeclarative, qttools, solid }: @@ -15,13 +15,13 @@ mkDerivation { kdeclarative kdelibs4support ki18n kio kwindowsystem plasma-framework qtdeclarative kcompletion kconfigwidgets kcoreaddons kdbusaddons kiconthemes kinit kitemviews knotifications kservice kwallet kwidgetsaddons kxmlgui - mobile_broadband_provider_info modemmanager-qt networkmanager-qt openconnect + mobile-broadband-provider-info modemmanager-qt networkmanager-qt openconnect qca-qt5 solid ]; patches = [ (substituteAll { src = ./0001-mobile-broadband-provider-info-path.patch; - inherit mobile_broadband_provider_info; + inherit mobile-broadband-provider-info; }) (substituteAll { src = ./0002-openvpn-binary-path.patch; diff --git a/pkgs/desktops/plasma-5/plasma-pa.nix b/pkgs/desktops/plasma-5/plasma-pa.nix index 0bfad2b5c8e4..b60b5298d6db 100644 --- a/pkgs/desktops/plasma-5/plasma-pa.nix +++ b/pkgs/desktops/plasma-5/plasma-pa.nix @@ -2,7 +2,7 @@ mkDerivation, extra-cmake-modules, kdoctools, gconf, glib, kconfigwidgets, kcoreaddons, kdeclarative, kglobalaccel, ki18n, - libcanberra_gtk3, libpulseaudio, plasma-framework, qtdeclarative, kwindowsystem + libcanberra-gtk3, libpulseaudio, plasma-framework, qtdeclarative, kwindowsystem }: mkDerivation { @@ -10,6 +10,6 @@ mkDerivation { nativeBuildInputs = [ extra-cmake-modules kdoctools ]; buildInputs = [ gconf glib kconfigwidgets kcoreaddons kdeclarative kglobalaccel ki18n - libcanberra_gtk3 libpulseaudio plasma-framework qtdeclarative kwindowsystem + libcanberra-gtk3 libpulseaudio plasma-framework qtdeclarative kwindowsystem ]; } diff --git a/pkgs/desktops/plasma-5/sddm-kcm.nix b/pkgs/desktops/plasma-5/sddm-kcm.nix index 65912083a4cf..6becf3bf420b 100644 --- a/pkgs/desktops/plasma-5/sddm-kcm.nix +++ b/pkgs/desktops/plasma-5/sddm-kcm.nix @@ -1,5 +1,5 @@ { - mkDerivation, extra-cmake-modules, shared_mime_info, + mkDerivation, extra-cmake-modules, shared-mime-info, libpthreadstubs, libXcursor, libXdmcp, qtquickcontrols2, qtx11extras, karchive, ki18n, kio, knewstuff @@ -7,7 +7,7 @@ mkDerivation { name = "sddm-kcm"; - nativeBuildInputs = [ extra-cmake-modules shared_mime_info ]; + nativeBuildInputs = [ extra-cmake-modules shared-mime-info ]; buildInputs = [ libpthreadstubs libXcursor libXdmcp qtquickcontrols2 qtx11extras diff --git a/pkgs/desktops/plasma-5/user-manager.nix b/pkgs/desktops/plasma-5/user-manager.nix new file mode 100644 index 000000000000..f46792fc48f7 --- /dev/null +++ b/pkgs/desktops/plasma-5/user-manager.nix @@ -0,0 +1,13 @@ +{ + mkDerivation, extra-cmake-modules, kdoctools, kcmutils, kconfig, khtml, + ki18n, kiconthemes, kio, kwindowsystem, libpwquality +}: + +mkDerivation { + name = "user-manager"; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; + buildInputs = [ + kcmutils kconfig khtml ki18n kiconthemes kio kwindowsystem + libpwquality + ]; +} diff --git a/pkgs/desktops/plasma-5/xdg-desktop-portal-kde.nix b/pkgs/desktops/plasma-5/xdg-desktop-portal-kde.nix new file mode 100644 index 000000000000..115c5f2ac718 --- /dev/null +++ b/pkgs/desktops/plasma-5/xdg-desktop-portal-kde.nix @@ -0,0 +1,13 @@ +{ + mkDerivation, + extra-cmake-modules, gettext, kdoctools, python, + kcoreaddons, knotifications +}: + +mkDerivation { + name = "xdg-desktop-portal-kde"; + nativeBuildInputs = [ extra-cmake-modules gettext kdoctools python ]; + buildInputs = [ + kcoreaddons knotifications + ]; +} diff --git a/pkgs/desktops/rox/rox-filer/default.nix b/pkgs/desktops/rox/rox-filer/default.nix index 54b112927690..65e4463600a9 100644 --- a/pkgs/desktops/rox/rox-filer/default.nix +++ b/pkgs/desktops/rox/rox-filer/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, libxml2, gtk, libSM, shared_mime_info, hicolor_icon_theme }: +{ stdenv, fetchurl, pkgconfig, libxml2, gtk, libSM, shared-mime-info, hicolor-icon-theme }: let version = "2.11"; @@ -12,7 +12,7 @@ in stdenv.mkDerivation { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ libxml2 gtk shared_mime_info hicolor_icon_theme libSM ]; + buildInputs = [ libxml2 gtk shared-mime-info hicolor-icon-theme libSM ]; patches = [ ./rox-filer-2.11-in-source-build.patch diff --git a/pkgs/desktops/xfce/applications/mousepad.nix b/pkgs/desktops/xfce/applications/mousepad.nix index a2b91aaaa79e..d66fa2049e65 100644 --- a/pkgs/desktops/xfce/applications/mousepad.nix +++ b/pkgs/desktops/xfce/applications/mousepad.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, intltool, libxfce4util -, gtk, gtksourceview, dbus, dbus_glib, makeWrapper +, gtk, gtksourceview, dbus, dbus-glib, makeWrapper , dconf }: stdenv.mkDerivation rec { @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { buildInputs = [ pkgconfig intltool libxfce4util - gtk gtksourceview dbus dbus_glib makeWrapper + gtk gtksourceview dbus dbus-glib makeWrapper dconf ]; diff --git a/pkgs/desktops/xfce/applications/orage.nix b/pkgs/desktops/xfce/applications/orage.nix index c26327f4d920..f376b743c824 100644 --- a/pkgs/desktops/xfce/applications/orage.nix +++ b/pkgs/desktops/xfce/applications/orage.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, bison, flex, intltool, gtk, libical, dbus_glib +{ stdenv, fetchurl, pkgconfig, bison, flex, intltool, gtk, libical, dbus-glib , libnotify, popt, xfce }: @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig intltool bison flex ]; - buildInputs = [ gtk libical dbus_glib libnotify popt xfce.libxfce4util + buildInputs = [ gtk libical dbus-glib libnotify popt xfce.libxfce4util xfce.xfce4panel ]; preFixup = "rm $out/share/icons/hicolor/icon-theme.cache "; diff --git a/pkgs/desktops/xfce/applications/parole.nix b/pkgs/desktops/xfce/applications/parole.nix index 598c50380928..3b27456d78a3 100644 --- a/pkgs/desktops/xfce/applications/parole.nix +++ b/pkgs/desktops/xfce/applications/parole.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, makeWrapper, pkgconfig, intltool, gst_all_1 -, gtk, dbus_glib, libxfce4ui, libxfce4util, xfconf +, gtk, dbus-glib, libxfce4ui, libxfce4util, xfconf , taglib, libnotify , withGstPlugins ? true }: @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { buildInputs = [ makeWrapper - gtk dbus_glib libxfce4ui libxfce4util xfconf + gtk dbus-glib libxfce4ui libxfce4util xfconf taglib libnotify ] ++ (with gst_all_1; [ gst-plugins-base gst-plugins-good gst-plugins-bad gst-plugins-ugly gst-libav]); diff --git a/pkgs/desktops/xfce/applications/ristretto.nix b/pkgs/desktops/xfce/applications/ristretto.nix index b38b97b90438..f849fbd20a73 100644 --- a/pkgs/desktops/xfce/applications/ristretto.nix +++ b/pkgs/desktops/xfce/applications/ristretto.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, pkgconfig, intltool, libexif, gtk -, exo, dbus_glib, libxfce4util, libxfce4ui, xfconf -, hicolor_icon_theme, makeWrapper +, exo, dbus-glib, libxfce4util, libxfce4ui, xfconf +, hicolor-icon-theme, makeWrapper }: stdenv.mkDerivation rec { @@ -15,13 +15,13 @@ stdenv.mkDerivation rec { name = "${p_name}-${ver_maj}.${ver_min}"; buildInputs = - [ pkgconfig intltool libexif gtk dbus_glib exo libxfce4util - libxfce4ui xfconf hicolor_icon_theme makeWrapper + [ pkgconfig intltool libexif gtk dbus-glib exo libxfce4util + libxfce4ui xfconf hicolor-icon-theme makeWrapper ]; postInstall = '' wrapProgram "$out/bin/ristretto" \ - --prefix XDG_DATA_DIRS : "${hicolor_icon_theme}/share" + --prefix XDG_DATA_DIRS : "${hicolor-icon-theme}/share" ''; meta = { diff --git a/pkgs/desktops/xfce/applications/terminal.nix b/pkgs/desktops/xfce/applications/terminal.nix index ad1727da3b93..773a8274f341 100644 --- a/pkgs/desktops/xfce/applications/terminal.nix +++ b/pkgs/desktops/xfce/applications/terminal.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, intltool, ncurses, gtk, vte, dbus_glib +{ stdenv, fetchurl, pkgconfig, intltool, ncurses, gtk, vte, dbus-glib , exo, libxfce4util, libxfce4ui }: @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { name = "${p_name}-${ver_maj}.${ver_min}"; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ intltool exo gtk vte libxfce4util ncurses dbus_glib libxfce4ui ]; + buildInputs = [ intltool exo gtk vte libxfce4util ncurses dbus-glib libxfce4ui ]; meta = { homepage = http://www.xfce.org/projects/terminal; diff --git a/pkgs/desktops/xfce/applications/xfce4-screenshooter.nix b/pkgs/desktops/xfce/applications/xfce4-screenshooter.nix index ffcdf4835779..4c855b8ddeb6 100644 --- a/pkgs/desktops/xfce/applications/xfce4-screenshooter.nix +++ b/pkgs/desktops/xfce/applications/xfce4-screenshooter.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, intltool, xfce4panel, libxfce4util, gtk, libsoup -, makeWrapper, glib_networking, exo, hicolor_icon_theme, wrapGAppsHook }: +, makeWrapper, glib-networking, exo, hicolor-icon-theme, wrapGAppsHook }: stdenv.mkDerivation rec { p_name = "xfce4-screenshooter"; @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - xfce4panel libxfce4util gtk libsoup exo hicolor_icon_theme glib_networking + xfce4panel libxfce4util gtk libsoup exo hicolor-icon-theme glib-networking ]; meta = { diff --git a/pkgs/desktops/xfce/core/exo.nix b/pkgs/desktops/xfce/core/exo.nix index a213b27a7619..6b5ee4b31328 100644 --- a/pkgs/desktops/xfce/core/exo.nix +++ b/pkgs/desktops/xfce/core/exo.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, intltool, URI, glib, gtk, libxfce4ui, libxfce4util -, hicolor_icon_theme }: +, hicolor-icon-theme }: stdenv.mkDerivation rec { p_name = "exo"; @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { # lib/xfce4/exo-1/exo-compose-mail-1 is a perl script :-/ nativeBuildInputs = [ pkgconfig intltool ]; - buildInputs = [ URI glib gtk libxfce4ui libxfce4util hicolor_icon_theme ]; + buildInputs = [ URI glib gtk libxfce4ui libxfce4util hicolor-icon-theme ]; meta = with stdenv.lib; { homepage = "http://www.xfce.org/projects/${p_name}"; diff --git a/pkgs/desktops/xfce/core/libxfce4ui.nix b/pkgs/desktops/xfce/core/libxfce4ui.nix index 58fc6c3fe4be..e8d5b4acd769 100644 --- a/pkgs/desktops/xfce/core/libxfce4ui.nix +++ b/pkgs/desktops/xfce/core/libxfce4ui.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, intltool, xorg, gtk, libxfce4util, xfconf -, libglade, libstartup_notification, hicolor_icon_theme +, libglade, libstartup_notification, hicolor-icon-theme , withGtk3 ? false, gtk3 }: let @@ -22,7 +22,7 @@ stdenv.mkDerivation rec { buildInputs = [ gtk libxfce4util xfconf libglade - libstartup_notification hicolor_icon_theme + libstartup_notification hicolor-icon-theme ] ++ optional withGtk3 gtk3; propagatedBuildInputs = [ xorg.libICE xorg.libSM ]; diff --git a/pkgs/desktops/xfce/core/libxfcegui4.nix b/pkgs/desktops/xfce/core/libxfcegui4.nix index 106cda6b9757..7fe76057c930 100644 --- a/pkgs/desktops/xfce/core/libxfcegui4.nix +++ b/pkgs/desktops/xfce/core/libxfcegui4.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, intltool, gtk -, libxfce4util, xfconf, libglade, libstartup_notification, hicolor_icon_theme }: +, libxfce4util, xfconf, libglade, libstartup_notification, hicolor-icon-theme }: let p_name = "libxfcegui4"; ver_maj = "4.10"; @@ -25,7 +25,7 @@ stdenv.mkDerivation rec { buildInputs = [ pkgconfig intltool gtk libxfce4util xfconf libglade - libstartup_notification hicolor_icon_theme + libstartup_notification hicolor-icon-theme ]; meta = { diff --git a/pkgs/desktops/xfce/core/thunar-build.nix b/pkgs/desktops/xfce/core/thunar-build.nix index bfc55f87b5cd..bf44fc0adbba 100644 --- a/pkgs/desktops/xfce/core/thunar-build.nix +++ b/pkgs/desktops/xfce/core/thunar-build.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, intltool -, gtk, dbus_glib, libstartup_notification, libnotify, libexif, pcre, udev +, gtk, dbus-glib, libstartup_notification, libnotify, libexif, pcre, udev , exo, libxfce4util, xfconf, xfce4panel, wrapGAppsHook }: @@ -24,7 +24,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig wrapGAppsHook ]; buildInputs = [ intltool - gtk dbus_glib libstartup_notification libnotify libexif pcre udev + gtk dbus-glib libstartup_notification libnotify libexif pcre udev exo libxfce4util xfconf xfce4panel ]; # TODO: optionality? diff --git a/pkgs/desktops/xfce/core/tumbler.nix b/pkgs/desktops/xfce/core/tumbler.nix index 6e785c9438bb..3e1d2be2b531 100644 --- a/pkgs/desktops/xfce/core/tumbler.nix +++ b/pkgs/desktops/xfce/core/tumbler.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, intltool, dbus_glib, gdk_pixbuf, curl, freetype +{ stdenv, fetchurl, pkgconfig, intltool, dbus-glib, gdk_pixbuf, curl, freetype , libgsf, poppler, bzip2 }: let p_name = "tumbler"; @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig ]; buildInputs = [ - intltool dbus_glib gdk_pixbuf curl freetype + intltool dbus-glib gdk_pixbuf curl freetype poppler libgsf bzip2 ]; diff --git a/pkgs/desktops/xfce/core/xfce4-panel.nix b/pkgs/desktops/xfce/core/xfce4-panel.nix index e9f6240cbdfe..26548f6daa42 100644 --- a/pkgs/desktops/xfce/core/xfce4-panel.nix +++ b/pkgs/desktops/xfce/core/xfce4-panel.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, pkgconfig, intltool, gtk, libxfce4util, libxfce4ui , libxfce4ui_gtk3, libwnck, exo, garcon, xfconf, libstartup_notification -, makeWrapper, xfce4mixer, hicolor_icon_theme -, withGtk3 ? false, gtk3, gettext, glib_networking +, makeWrapper, xfce4mixer, hicolor-icon-theme +, withGtk3 ? false, gtk3, gettext, glib-networking }: let inherit (stdenv.lib) optional; @@ -30,7 +30,7 @@ stdenv.mkDerivation rec { buildInputs = [ pkgconfig intltool gtk libxfce4util exo libwnck - garcon xfconf libstartup_notification makeWrapper hicolor_icon_theme + garcon xfconf libstartup_notification makeWrapper hicolor-icon-theme ] ++ xfce4mixer.gst_plugins ++ optional withGtk3 gtk3; @@ -41,7 +41,7 @@ stdenv.mkDerivation rec { postInstall = '' wrapProgram "$out/bin/xfce4-panel" \ --prefix GST_PLUGIN_SYSTEM_PATH : "$GST_PLUGIN_SYSTEM_PATH" \ - --prefix GIO_EXTRA_MODULES : "${glib_networking}/lib/gio/modules" + --prefix GIO_EXTRA_MODULES : "${glib-networking}/lib/gio/modules" ''; enableParallelBuilding = true; diff --git a/pkgs/desktops/xfce/core/xfce4-power-manager.nix b/pkgs/desktops/xfce/core/xfce4-power-manager.nix index c72061e577e8..9425c4d8884b 100644 --- a/pkgs/desktops/xfce/core/xfce4-power-manager.nix +++ b/pkgs/desktops/xfce/core/xfce4-power-manager.nix @@ -1,5 +1,5 @@ -{ stdenv, lib, fetchurl, pkgconfig, intltool, glib, gtk, dbus_glib, upower, xfconf -, libxfce4ui, libxfce4util, libnotify, xfce4panel, hicolor_icon_theme +{ stdenv, lib, fetchurl, pkgconfig, intltool, glib, gtk, dbus-glib, upower, xfconf +, libxfce4ui, libxfce4util, libnotify, xfce4panel, hicolor-icon-theme , withGtk3 ? false, gtk3, libxfce4ui_gtk3, xfce4panel_gtk3 }: let p_name = "xfce4-power-manager"; @@ -18,8 +18,8 @@ stdenv.mkDerivation rec { }; buildInputs = - [ pkgconfig intltool glib dbus_glib upower xfconf libxfce4util - libnotify hicolor_icon_theme + [ pkgconfig intltool glib dbus-glib upower xfconf libxfce4util + libnotify hicolor-icon-theme ] ++ (if withGtk3 then [ gtk3 libxfce4ui_gtk3 xfce4panel_gtk3 ] diff --git a/pkgs/desktops/xfce/core/xfce4-session.nix b/pkgs/desktops/xfce/core/xfce4-session.nix index edc810d38972..73939d535872 100644 --- a/pkgs/desktops/xfce/core/xfce4-session.nix +++ b/pkgs/desktops/xfce/core/xfce4-session.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, fetchpatch, pkgconfig, intltool, gtk, polkit -, libxfce4util, libxfce4ui, xfce4panel, libwnck, dbus_glib, xfconf, libglade, xorg -, hicolor_icon_theme +, libxfce4util, libxfce4ui, xfce4panel, libwnck, dbus-glib, xfconf, libglade, xorg +, hicolor-icon-theme }: let @@ -22,9 +22,9 @@ stdenv.mkDerivation rec { ]; buildInputs = - [ pkgconfig intltool gtk libxfce4util libxfce4ui libwnck dbus_glib + [ pkgconfig intltool gtk libxfce4util libxfce4ui libwnck dbus-glib xfconf xfce4panel libglade xorg.iceauth xorg.libSM - polkit hicolor_icon_theme + polkit hicolor-icon-theme ]; #TODO: upower-glib, gconf (assistive?), gnome keyring preBuild = '' diff --git a/pkgs/desktops/xfce/core/xfconf.nix b/pkgs/desktops/xfce/core/xfconf.nix index fbf03cc4a81d..9aa66a1343f6 100644 --- a/pkgs/desktops/xfce/core/xfconf.nix +++ b/pkgs/desktops/xfce/core/xfconf.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, intltool, glib, libxfce4util, dbus_glib }: +{ stdenv, fetchurl, pkgconfig, intltool, glib, libxfce4util, dbus-glib }: let p_name = "xfconf"; ver_maj = "4.12"; @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { #TODO: no perl bingings yet (ExtUtils::Depends, ExtUtils::PkgConfig, Glib) nativeBuildInputs = [ pkgconfig ]; buildInputs = [ intltool glib libxfce4util ]; - propagatedBuildInputs = [ dbus_glib ]; + propagatedBuildInputs = [ dbus-glib ]; meta = with stdenv.lib; { homepage = http://docs.xfce.org/xfce/xfconf/start; diff --git a/pkgs/desktops/xfce/core/xfdesktop.nix b/pkgs/desktops/xfce/core/xfdesktop.nix index 165381451425..491185ff2c09 100644 --- a/pkgs/desktops/xfce/core/xfdesktop.nix +++ b/pkgs/desktops/xfce/core/xfdesktop.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, fetchpatch, pkgconfig, intltool, gtk, libxfce4util, libxfce4ui , libwnck, xfconf, libglade, xfce4panel, thunar, exo, garcon, libnotify -, hicolor_icon_theme }: +, hicolor-icon-theme }: let p_name = "xfdesktop"; ver_maj = "4.12"; @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { buildInputs = [ pkgconfig intltool gtk libxfce4util libxfce4ui libwnck xfconf - libglade xfce4panel thunar exo garcon libnotify hicolor_icon_theme + libglade xfce4panel thunar exo garcon libnotify hicolor-icon-theme ]; patches = [(fetchpatch { diff --git a/pkgs/development/compilers/boo/default.nix b/pkgs/development/compilers/boo/default.nix index d27f498842e3..968c845a0119 100644 --- a/pkgs/development/compilers/boo/default.nix +++ b/pkgs/development/compilers/boo/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub, pkgconfig, dbus, mono, makeWrapper, nant -, shared_mime_info, gtksourceview, gtk2 +, shared-mime-info, gtksourceview, gtk2 , targetVersion ? "4.5" }: let @@ -18,7 +18,7 @@ in stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig ]; buildInputs = [ - mono makeWrapper nant shared_mime_info gtksourceview + mono makeWrapper nant shared-mime-info gtksourceview gtk2 ]; diff --git a/pkgs/development/compilers/ccl/default.nix b/pkgs/development/compilers/ccl/default.nix index 696728e6f32c..087f74700214 100644 --- a/pkgs/development/compilers/ccl/default.nix +++ b/pkgs/development/compilers/ccl/default.nix @@ -2,7 +2,7 @@ let options = rec { - /* TODO: there are also MacOS, FreeBSD and Windows versions */ + /* TODO: there are also FreeBSD and Windows versions */ x86_64-linux = { arch = "linuxx86"; sha256 = "0hs1f3z7crgzvinpj990kv9gvbsipxvcvwbmk54n51nasvc5025q"; @@ -21,6 +21,18 @@ let runtime = "armcl"; kernel = "linuxarm"; }; + x86_64-darwin = { + arch = "darwinx86"; + sha256 = "5adbea3d8b4a2e29af30d141f781c6613844f468c0ccfa11bae908c3e9641939"; + runtime = "dx86cl64"; + kernel = "darwinx8664"; + }; + i686-darwin = { + arch = "darwinx86"; + sha256 = x86_64-darwin.sha256; + runtime = "dx86cl"; + kernel = "darwinx8632"; + }; armv6l-linux = armv7l-linux; }; cfg = options.${stdenv.system}; @@ -37,12 +49,22 @@ stdenv.mkDerivation rec { sha256 = cfg.sha256; }; - buildInputs = [ gcc glibc m4 ]; + buildInputs = if stdenv.isDarwin then [ m4 ] else [ gcc glibc m4 ]; CCL_RUNTIME = cfg.runtime; CCL_KERNEL = cfg.kernel; - postPatch = '' + postPatch = if stdenv.isDarwin then '' + substituteInPlace lisp-kernel/${CCL_KERNEL}/Makefile \ + --replace "M4 = gm4" "M4 = m4" \ + --replace "dtrace" "/usr/sbin/dtrace" \ + --replace "mig" "/usr/bin/mig" \ + --replace "/bin/rm" "${coreutils}/bin/rm" \ + --replace "/bin/echo" "${coreutils}/bin/echo" + + substituteInPlace lisp-kernel/m4macros.m4 \ + --replace "/bin/pwd" "${coreutils}/bin/pwd" + '' else '' substituteInPlace lisp-kernel/${CCL_KERNEL}/Makefile \ --replace "/bin/rm" "${coreutils}/bin/rm" \ --replace "/bin/echo" "${coreutils}/bin/echo" @@ -63,7 +85,7 @@ stdenv.mkDerivation rec { cp -r . "$out/share/ccl-installation" mkdir -p "$out/bin" - echo -e '#!/bin/sh\n'"$out/share/ccl-installation/${CCL_RUNTIME}"' "$@"\n' > "$out"/bin/"${CCL_RUNTIME}" + echo -e '#!${stdenv.shell}\n'"$out/share/ccl-installation/${CCL_RUNTIME}"' "$@"\n' > "$out"/bin/"${CCL_RUNTIME}" chmod a+x "$out"/bin/"${CCL_RUNTIME}" ln -s "$out"/bin/"${CCL_RUNTIME}" "$out"/bin/ccl ''; diff --git a/pkgs/development/compilers/cudatoolkit/default.nix b/pkgs/development/compilers/cudatoolkit/default.nix index fd8930bc8547..8f9f6e19993d 100644 --- a/pkgs/development/compilers/cudatoolkit/default.nix +++ b/pkgs/development/compilers/cudatoolkit/default.nix @@ -11,11 +11,12 @@ let , name ? "" , developerProgram ? false , python ? python27 + , runPatches ? [] }: stdenv.mkDerivation rec { name = "cudatoolkit-${version}"; - inherit (args) version; + inherit version runPatches; dontPatchELF = true; dontStrip = true; @@ -48,35 +49,34 @@ let rpath = "${stdenv.lib.makeLibraryPath runtimeDependencies}:${stdenv.cc.cc.lib}/lib64"; + phases = [ "unpackPhase" "installPhase" "fixupPhase" ]; + unpackPhase = '' sh $src --keep --noexec + cd pkg/run_files sh cuda-linux*.run --keep --noexec sh cuda-samples*.run --keep --noexec - cd pkg - ''; + mv pkg ../../$(basename $src) + cd ../.. + rm -rf pkg - buildPhase = '' - chmod -R u+w . - while IFS= read -r -d ''$'\0' i; do - if ! isELF "$i"; then continue; fi - echo "patching $i..." - if [[ ! $i =~ \.so ]]; then - patchelf \ - --set-interpreter "''$(cat $NIX_CC/nix-support/dynamic-linker)" $i - fi - if [[ $i =~ libcudart ]]; then - rpath2= - else - rpath2=$rpath:$lib/lib:$out/jre/lib/amd64/jli:$out/lib:$out/lib64:$out/nvvm/lib:$out/nvvm/lib64 - fi - patchelf --set-rpath $rpath2 --force-rpath $i - done < <(find . -type f -print0) + for patch in $runPatches; do + sh $patch --keep --noexec + mv pkg $(basename $patch) + done ''; installPhase = '' mkdir $out + cd $(basename $src) perl ./install-linux.pl --prefix="$out" + cd .. + for patch in $runPatches; do + cd $(basename $patch) + perl ./install_patch.pl --silent --accept-eula --installdir="$out" + cd .. + done rm $out/tools/CUDA_Occupancy_Calculator.xls # FIXME: why? @@ -117,6 +117,23 @@ let echo "NIX_CFLAGS_COMPILE+=' -D_FORCE_INLINES'" >> $out/nix-support/setup-hook ''; + preFixup = '' + while IFS= read -r -d ''$'\0' i; do + if ! isELF "$i"; then continue; fi + echo "patching $i..." + if [[ ! $i =~ \.so ]]; then + patchelf \ + --set-interpreter "''$(cat $NIX_CC/nix-support/dynamic-linker)" $i + fi + if [[ $i =~ libcudart ]]; then + rpath2= + else + rpath2=$rpath:$lib/lib:$out/jre/lib/amd64/jli:$out/lib:$out/lib64:$out/nvvm/lib:$out/nvvm/lib64 + fi + patchelf --set-rpath $rpath2 --force-rpath $i + done < <(find $out $lib $doc -type f -print0) + ''; + passthru = { cc = gcc; majorVersion = @@ -163,16 +180,28 @@ in { }; cudatoolkit8 = common { - version = "8.0.61"; + version = "8.0.61.2"; url = "https://developer.nvidia.com/compute/cuda/8.0/Prod2/local_installers/cuda_8.0.61_375.26_linux-run"; sha256 = "1i4xrsqbad283qffvysn88w2pmxzxbbby41lw0j1113z771akv4w"; + runPatches = [ + (fetchurl { + url = "https://developer.nvidia.com/compute/cuda/8.0/Prod2/patches/2/cuda_8.0.61.2_linux-run"; + sha256 = "1iaz5rrsnsb1p99qiqvxn6j3ksc7ry8xlr397kqcjzxqbljbqn9d"; + }) + ]; gcc = gcc5; }; cudatoolkit9 = common { - version = "9.0.176"; - url = "https://developer.nvidia.com/compute/cuda/9.0/Prod/local_installers/cuda_9.0.176_384.81_linux-run"; - sha256 = "0308rmmychxfa4inb1ird9bpgfppgr9yrfg1qp0val5azqik91ln"; + version = "9.1.85.1"; + url = "https://developer.nvidia.com/compute/cuda/9.1/Prod/local_installers/cuda_9.1.85_387.26_linux"; + sha256 = "0lz9bwhck1ax4xf1fyb5nicb7l1kssslj518z64iirpy2qmwg5l4"; + runPatches = [ + (fetchurl { + url = "https://developer.nvidia.com/compute/cuda/9.1/Prod/patches/1/cuda_9.1.85.1_linux"; + sha256 = "1f53ij5nb7g0vb5pcpaqvkaj1x4mfq3l0mhkfnqbk8sfrvby775g"; + }) + ]; gcc = gcc6; }; diff --git a/pkgs/development/compilers/gambit/bootstrap.nix b/pkgs/development/compilers/gambit/bootstrap.nix index e645ecb41bd2..7376aec27501 100644 --- a/pkgs/development/compilers/gambit/bootstrap.nix +++ b/pkgs/development/compilers/gambit/bootstrap.nix @@ -2,12 +2,12 @@ stdenv.mkDerivation rec { name = "gambit-bootstrap-${version}"; - version = "4.8.8"; - tarball_version = "v4_8_8"; + version = "4.8.9"; + tarball_version = "v4_8_9"; src = fetchurl { url = "http://www.iro.umontreal.ca/~gambit/download/gambit/v4.8/source/gambit-${tarball_version}-devel.tgz"; - sha256 = "075k2z04d6svxqf9paj3xvp0mm0xzy0vbma1y61s0lkywdim8xjz"; + sha256 = "b7f86c794711792ca556ce41f8bc7043dffc395c01bb6d8d119bc2f454f89fbf"; }; buildInputs = [ autoconf ]; diff --git a/pkgs/development/compilers/gambit/default.nix b/pkgs/development/compilers/gambit/default.nix index 7466c85ca6ed..95e8dba762a2 100644 --- a/pkgs/development/compilers/gambit/default.nix +++ b/pkgs/development/compilers/gambit/default.nix @@ -4,13 +4,13 @@ stdenv.mkDerivation rec { name = "gambit-${version}"; - version = "4.8.8-435-gd1991ba7"; + version = "4.8.9"; bootstrap = import ./bootstrap.nix ( pkgs ); src = fetchgit { url = "https://github.com/feeley/gambit.git"; - rev = "d1991ba7e90ed0149964320f7cafa1a8289e61f0"; - sha256 = "02harwcsqxxcxgn2yc1y9kyxdp32mampyvnbxrzg2jzfmnp5g6cm"; + rev = "dd54a71dfc0bd09813592f1645d755867a02195d"; + sha256 = "120kg73k39gshrwas8a3xcrxgnq1c7ww92wgy4d3mmrwy3j9nzzc"; }; # Use makeStaticLibraries to enable creation of statically linked binaries diff --git a/pkgs/development/compilers/gcc/4.5/default.nix b/pkgs/development/compilers/gcc/4.5/default.nix index 6b2718f5e692..c63867a1d2db 100644 --- a/pkgs/development/compilers/gcc/4.5/default.nix +++ b/pkgs/development/compilers/gcc/4.5/default.nix @@ -317,8 +317,8 @@ stdenv.mkDerivation ({ # Platform-specific flags optional (targetPlatform == hostPlatform && targetPlatform.isi686) "--with-arch=i686" ++ - # Trick that should be taken out once we have a mips64el-linux not loongson2f - optional (targetPlatform == hostPlatform && stdenv.system == "mips64el-linux") "--with-arch=loongson2f" + # Trick that should be taken out once we have a mipsel-linux not loongson2f + optional (targetPlatform == hostPlatform && stdenv.system == "mipsel-linux") "--with-arch=loongson2f" ; targetConfig = if targetPlatform != hostPlatform then targetPlatform.config else null; diff --git a/pkgs/development/compilers/gcc/7/default.nix b/pkgs/development/compilers/gcc/7/default.nix index 42ac766d2cc0..e8997b1efb06 100644 --- a/pkgs/development/compilers/gcc/7/default.nix +++ b/pkgs/development/compilers/gcc/7/default.nix @@ -33,7 +33,6 @@ , gnused ? null , cloog # unused; just for compat with gcc4, as we override the parameter on some places , darwin ? null -, flex ? null , buildPlatform, hostPlatform, targetPlatform , buildPackages }: @@ -144,6 +143,9 @@ let version = "7.3.0"; "--disable-shared" "--disable-libatomic" # libatomic requires libc "--disable-decimal-float" # libdecnumber requires libc + # maybe only needed on musl, PATH_MAX + # https://github.com/richfelker/musl-cross-make/blob/0867cdf300618d1e3e87a0a939fa4427207ad9d7/litecross/Makefile#L62 + "--disable-libmpx" ] else [ (if crossDarwin then "--with-sysroot=${getLib libcCross}/share/sysroot" else "--with-headers=${getDev libcCross}/include") @@ -167,6 +169,8 @@ let version = "7.3.0"; # In uclibc cases, libgomp needs an additional '-ldl' # and as I don't know how to pass it, I disable libgomp. "--disable-libgomp" + # musl at least, disable: https://git.buildroot.net/buildroot/commit/?id=873d4019f7fb00f6a80592224236b3ba7d657865 + "--disable-libmpx" ] ++ [ "--enable-threads=posix" "--enable-nls" @@ -269,7 +273,7 @@ stdenv.mkDerivation ({ -e 's|define[[:blank:]]*MUSL_DYNAMIC_LINKER\([0-9]*\)[[:blank:]]"\([^\"]\+\)"$|define MUSL_DYNAMIC_LINKER\1 "${libc.out}\2"|g' done '' - + stdenv.lib.optionalString (hostPlatform.libc == "musl") + + stdenv.lib.optionalString (targetPlatform.libc == "musl") '' sed -i gcc/config/linux.h -e '1i#undef LOCAL_INCLUDE_DIR' '' @@ -295,7 +299,7 @@ stdenv.mkDerivation ({ ]; buildInputs = [ - gmp mpfr libmpc libelf flex + gmp mpfr libmpc libelf targetPackages.stdenv.cc.bintools # For linking code at run-time ] ++ (optional (isl != null) isl) ++ (optional (zlib != null) zlib) @@ -408,9 +412,8 @@ stdenv.mkDerivation ({ targetConfig = if targetPlatform != hostPlatform then targetPlatform.config else null; - buildFlags = if bootstrap then - (if profiledCompiler then "profiledbootstrap" else "bootstrap") - else ""; + buildFlags = + optional bootstrap (if profiledCompiler then "profiledbootstrap" else "bootstrap"); installTargets = if stripped @@ -523,7 +526,7 @@ stdenv.mkDerivation ({ } # Strip kills static libs of other archs (hence targetPlatform != hostPlatform) -// optionalAttrs (!stripped || targetPlatform != hostPlatform) { dontStrip = true; NIX_STRIP_DEBUG = 0; } +// optionalAttrs (!stripped || targetPlatform != hostPlatform) { dontStrip = true; } // optionalAttrs (enableMultilib) { dontMoveLib64 = true; } ) diff --git a/pkgs/development/compilers/gerbil/default.nix b/pkgs/development/compilers/gerbil/default.nix index f67582385e6f..c1a411120d03 100644 --- a/pkgs/development/compilers/gerbil/default.nix +++ b/pkgs/development/compilers/gerbil/default.nix @@ -8,11 +8,11 @@ stdenv.mkDerivation rec { name = "gerbil-${version}"; - version = "0.12-DEV-1404-g0a266db"; + version = "0.12-RELEASE"; src = fetchgit { url = "https://github.com/vyzo/gerbil.git"; - rev = "0a266db5e2e241272711bc150cc2607204bf2b78"; - sha256 = "1lvawqn8havfyxkkgfqffc213zq2pgm179l42yj49fy3fhpzia4m"; + rev = "5618892d7939e1cb4ef5247912e0bc1ec99f6b52"; + sha256 = "0b2valahf5k81r4sp6y12d44fb286p92s7k6dphij0kmvg0dp818"; }; # Use makeStaticLibraries to enable creation of statically linked binaries diff --git a/pkgs/development/compilers/ghc/7.0.4-binary.nix b/pkgs/development/compilers/ghc/7.0.4-binary.nix index 51dd24671bdd..8758ee59d384 100644 --- a/pkgs/development/compilers/ghc/7.0.4-binary.nix +++ b/pkgs/development/compilers/ghc/7.0.4-binary.nix @@ -138,7 +138,7 @@ stdenv.mkDerivation rec { targetPrefix = ""; # Our Cabal compiler name - haskellCompilerName = "ghc"; + haskellCompilerName = "ghc-7.0.4"; }; meta.license = stdenv.lib.licenses.bsd3; diff --git a/pkgs/development/compilers/ghc/7.0.4.nix b/pkgs/development/compilers/ghc/7.0.4.nix index 54323458d9bd..5bd05b257ca5 100644 --- a/pkgs/development/compilers/ghc/7.0.4.nix +++ b/pkgs/development/compilers/ghc/7.0.4.nix @@ -49,7 +49,7 @@ stdenv.mkDerivation rec { targetPrefix = ""; # Our Cabal compiler name - haskellCompilerName = "ghc"; + haskellCompilerName = "ghc-7.0.4"; }; meta = { diff --git a/pkgs/development/compilers/ghc/7.10.3.nix b/pkgs/development/compilers/ghc/7.10.3.nix index c4780690f678..e4bf23c6e9e2 100644 --- a/pkgs/development/compilers/ghc/7.10.3.nix +++ b/pkgs/development/compilers/ghc/7.10.3.nix @@ -171,7 +171,7 @@ stdenv.mkDerivation rec { inherit llvmPackages; # Our Cabal compiler name - haskellCompilerName = "ghc"; + haskellCompilerName = "ghc-7.10.3"; }; meta = { diff --git a/pkgs/development/compilers/ghc/7.4.2-binary.nix b/pkgs/development/compilers/ghc/7.4.2-binary.nix index 4f00ef8fb751..988392e74b9e 100644 --- a/pkgs/development/compilers/ghc/7.4.2-binary.nix +++ b/pkgs/development/compilers/ghc/7.4.2-binary.nix @@ -140,7 +140,7 @@ stdenv.mkDerivation rec { targetPrefix = ""; # Our Cabal compiler name - haskellCompilerName = "ghc"; + haskellCompilerName = "ghc-7.4.2"; }; meta.license = stdenv.lib.licenses.bsd3; diff --git a/pkgs/development/compilers/ghc/7.4.2.nix b/pkgs/development/compilers/ghc/7.4.2.nix index 7f636284c68d..86925c406cfc 100644 --- a/pkgs/development/compilers/ghc/7.4.2.nix +++ b/pkgs/development/compilers/ghc/7.4.2.nix @@ -60,7 +60,7 @@ stdenv.mkDerivation rec { targetPrefix = ""; # Our Cabal compiler name - haskellCompilerName = "ghc"; + haskellCompilerName = "ghc-7.4.2"; }; meta = { diff --git a/pkgs/development/compilers/ghc/7.6.3.nix b/pkgs/development/compilers/ghc/7.6.3.nix index 481b8d90918c..982008563a06 100644 --- a/pkgs/development/compilers/ghc/7.6.3.nix +++ b/pkgs/development/compilers/ghc/7.6.3.nix @@ -86,7 +86,7 @@ in stdenv.mkDerivation rec { targetPrefix = ""; # Our Cabal compiler name - haskellCompilerName = "ghc"; + haskellCompilerName = "ghc-7.6.3"; }; meta = { diff --git a/pkgs/development/compilers/ghc/7.8.4.nix b/pkgs/development/compilers/ghc/7.8.4.nix index 15f105946f51..47fc090c1ff1 100644 --- a/pkgs/development/compilers/ghc/7.8.4.nix +++ b/pkgs/development/compilers/ghc/7.8.4.nix @@ -78,7 +78,7 @@ stdenv.mkDerivation rec { targetPrefix = ""; # Our Cabal compiler name - haskellCompilerName = "ghc"; + haskellCompilerName = "ghc-7.8.4"; }; meta = { diff --git a/pkgs/development/compilers/ghc/8.0.2.nix b/pkgs/development/compilers/ghc/8.0.2.nix index 011822994ed3..7d11ffb66c60 100644 --- a/pkgs/development/compilers/ghc/8.0.2.nix +++ b/pkgs/development/compilers/ghc/8.0.2.nix @@ -172,7 +172,7 @@ stdenv.mkDerivation rec { inherit llvmPackages; # Our Cabal compiler name - haskellCompilerName = "ghc"; + haskellCompilerName = "ghc-8.0.2"; }; meta = { diff --git a/pkgs/development/compilers/ghc/8.2.2.nix b/pkgs/development/compilers/ghc/8.2.2.nix index f4aa2de3241e..1c3f260da1c1 100644 --- a/pkgs/development/compilers/ghc/8.2.2.nix +++ b/pkgs/development/compilers/ghc/8.2.2.nix @@ -191,7 +191,7 @@ stdenv.mkDerivation rec { inherit llvmPackages; # Our Cabal compiler name - haskellCompilerName = "ghc"; + haskellCompilerName = "ghc-8.2.2"; }; meta = { diff --git a/pkgs/development/compilers/ghc/8.4.1.nix b/pkgs/development/compilers/ghc/8.4.1.nix index e7ec9be16b69..8f7cdc9568e4 100644 --- a/pkgs/development/compilers/ghc/8.4.1.nix +++ b/pkgs/development/compilers/ghc/8.4.1.nix @@ -24,7 +24,7 @@ # platform). Static libs are always built. enableShared ? true -, version ? "8.4.0.20180204" +, version ? "8.4.0.20180224" , # Whether to backport https://phabricator.haskell.org/D4388 for # deterministic profiling symbol names, at the cost of a slightly # non-standard GHC API @@ -77,8 +77,8 @@ stdenv.mkDerivation rec { src = fetchgit { url = "git://git.haskell.org/ghc.git"; - rev = "111737cd218751f06ea58d3cf2c7c144265b5dfc"; - sha256 = "0ksp0k3sp928aq2cv6whgbfmjnr7l2j10diha13nncksp4byf0s9"; + rev = "a1e15c8f59092ef2d11be7966bd20688d8dc01e6"; + sha256 = "1pimf5ryl76r3vwnc2n0qzk4yh7zckp2r2g5rlz8nbddsws2v893"; }; enableParallelBuilding = true; @@ -190,7 +190,7 @@ stdenv.mkDerivation rec { inherit llvmPackages; # Our Cabal compiler name - haskellCompilerName = "ghc"; + haskellCompilerName = "ghc-8.4.1"; }; meta = { diff --git a/pkgs/development/compilers/ghc/head.nix b/pkgs/development/compilers/ghc/head.nix index 82cef10ce3be..bc3ccbdcdf51 100644 --- a/pkgs/development/compilers/ghc/head.nix +++ b/pkgs/development/compilers/ghc/head.nix @@ -180,7 +180,7 @@ stdenv.mkDerivation rec { inherit llvmPackages; # Our Cabal compiler name - haskellCompilerName = "ghc"; + haskellCompilerName = "ghc-8.5"; }; meta = { diff --git a/pkgs/development/compilers/go/1.8.nix b/pkgs/development/compilers/go/1.10.nix similarity index 89% rename from pkgs/development/compilers/go/1.8.nix rename to pkgs/development/compilers/go/1.10.nix index 7775a17a646c..145f6a17978d 100644 --- a/pkgs/development/compilers/go/1.8.nix +++ b/pkgs/development/compilers/go/1.10.nix @@ -25,13 +25,13 @@ in stdenv.mkDerivation rec { name = "go-${version}"; - version = "1.8.7"; + version = "1.10"; src = fetchFromGitHub { owner = "golang"; repo = "go"; rev = "go${version}"; - sha256 = "06v83fb75079dy2dc1927sr9bwvcpkkzl9d4wcw10scj70vj4a0x"; + sha256 = "1dzs1mz3zxgg1qyi2lrlxdz1lsvazxvmj9cb69pgqnwjlh3jpw0l"; }; # perl is used for testing go vet @@ -73,6 +73,10 @@ stdenv.mkDerivation rec { sed -i '/TestCoverageWithCgo/areturn' src/cmd/go/go_test.go # Remove the timezone naming test sed -i '/TestLoadFixed/areturn' src/time/time_test.go + # Remove disable setgid test + sed -i '/TestRespectSetgidDir/areturn' src/cmd/go/internal/work/build_test.go + # Remove cert tests that conflict with NixOS's cert resolution + sed -i '/TestEnvVars/areturn' src/crypto/x509/root_unix_test.go sed -i 's,/etc/protocols,${iana-etc}/etc/protocols,' src/net/lookup_unix.go sed -i 's,/etc/services,${iana-etc}/etc/services,' src/net/port_unix.go @@ -93,9 +97,10 @@ stdenv.mkDerivation rec { sed -i 's,/_go_os_test,'"$TMPDIR"'/_go_os_test,' src/os/path_test.go sed -i '/TestChdirAndGetwd/areturn' src/os/os_test.go - sed -i '/TestRead0/areturn' src/os/os_test.go - sed -i '/TestNohup/areturn' src/os/signal/signal_test.go + sed -i '/TestCredentialNoSetGroups/areturn' src/os/exec/exec_posix_test.go sed -i '/TestCurrent/areturn' src/os/user/user_test.go + sed -i '/TestNohup/areturn' src/os/signal/signal_test.go + sed -i '/TestRead0/areturn' src/os/os_test.go sed -i '/TestSystemRoots/areturn' src/crypto/x509/root_darwin_test.go sed -i '/TestGoInstallRebuildsStalePackagesInOtherGOPATH/areturn' src/cmd/go/go_test.go @@ -104,19 +109,18 @@ stdenv.mkDerivation rec { sed -i '/TestDisasmExtld/areturn' src/cmd/objdump/objdump_test.go sed -i 's/unrecognized/unknown/' src/cmd/link/internal/ld/lib.go - sed -i 's/unrecognized/unknown/' src/cmd/go/build.go touch $TMPDIR/group $TMPDIR/hosts $TMPDIR/passwd - - sed -i '1 a\exit 0' misc/cgo/errors/test.bash ''; - patches = - [ ./remove-tools-1.8.patch - ./ssl-cert-file.patch - ./creds-test.patch - ./remove-test-pie-1.8.patch - ]; + patches = [ + ./remove-tools-1.9.patch + ./ssl-cert-file-1.9.patch + ./remove-test-pie.patch + ./creds-test.patch + ./go-1.9-skip-flaky-19608.patch + ./go-1.9-skip-flaky-20072.patch + ]; postPatch = optionalString stdenv.isDarwin '' echo "substitute hardcoded dsymutil with ${llvm}/bin/llvm-dsymutil" @@ -134,7 +138,6 @@ stdenv.mkDerivation rec { GO386 = 387; # from Arch: don't assume sse2 on i686 CGO_ENABLED = 1; GOROOT_BOOTSTRAP = "${goBootstrap}/share/go"; - # Hopefully avoids test timeouts on Hydra GO_TEST_TIMEOUT_SCALE = 3; @@ -172,11 +175,11 @@ stdenv.mkDerivation rec { disallowedReferences = [ go_bootstrap ]; meta = with stdenv.lib; { - branch = "1.8"; + branch = "1.9"; homepage = http://golang.org/; description = "The Go Programming language"; license = licenses.bsd3; - maintainers = with maintainers; [ cstrahan wkennington ]; + maintainers = with maintainers; [ cstrahan orivej velovix mic92 ]; platforms = platforms.linux ++ platforms.darwin; }; } diff --git a/pkgs/development/compilers/go/1.6.nix b/pkgs/development/compilers/go/1.6.nix deleted file mode 100644 index 0eebc92ee594..000000000000 --- a/pkgs/development/compilers/go/1.6.nix +++ /dev/null @@ -1,168 +0,0 @@ -{ stdenv, lib, fetchurl, tzdata, iana-etc, go_bootstrap, runCommand -, perl, which, pkgconfig, patch, fetchpatch -, pcre -, Security, Foundation, bash }: - -let - goBootstrap = runCommand "go-bootstrap" {} '' - mkdir $out - cp -rf ${go_bootstrap}/* $out/ - chmod -R u+w $out - find $out -name "*.c" -delete - cp -rf $out/bin/* $out/share/go/bin/ - ''; -in - -stdenv.mkDerivation rec { - name = "go-${version}"; - version = "1.6.4"; - - src = fetchurl { - url = "https://github.com/golang/go/archive/go${version}.tar.gz"; - sha256 = "1212pijypippg3sq9c9645kskq4ib73y1f8cv0ka6n279smk0mq9"; - }; - - # perl is used for testing go vet - nativeBuildInputs = [ perl which pkgconfig patch ]; - buildInputs = [ pcre ]; - propagatedBuildInputs = lib.optionals stdenv.isDarwin [ - Security Foundation - ]; - - hardeningDisable = [ "all" ]; - - # I'm not sure what go wants from its 'src', but the go installation manual - # describes an installation keeping the src. - preUnpack = '' - topdir=$PWD - mkdir -p $out/share - cd $out/share - ''; - - prePatch = '' - # Ensure that the source directory is named go - cd .. - if [ ! -d go ]; then - mv * go - fi - - cd go - patchShebangs ./ # replace /bin/bash - - # This script produces another script at run time, - # and thus it is not corrected by patchShebangs. - substituteInPlace misc/cgo/testcarchive/test.bash \ - --replace '#!/usr/bin/env bash' '#!${stdenv.shell}' - - # Disabling the 'os/http/net' tests (they want files not available in - # chroot builds) - rm src/net/{listen,parse}_test.go - rm src/syscall/exec_linux_test.go - # !!! substituteInPlace does not seems to be effective. - # The os test wants to read files in an existing path. Just don't let it be /usr/bin. - sed -i 's,/usr/bin,'"`pwd`", src/os/os_test.go - sed -i 's,/bin/pwd,'"`type -P pwd`", src/os/os_test.go - # Disable the unix socket test - sed -i '/TestShutdownUnix/areturn' src/net/net_test.go - # Disable the hostname test - sed -i '/TestHostname/areturn' src/os/os_test.go - # ParseInLocation fails the test - sed -i '/TestParseInSydney/areturn' src/time/format_test.go - # Remove the api check as it never worked - sed -i '/src\/cmd\/api\/run.go/ireturn nil' src/cmd/dist/test.go - # Remove the coverage test as we have removed this utility - sed -i '/TestCoverageWithCgo/areturn' src/cmd/go/go_test.go - # Remove the timezone naming test - sed -i '/TestLoadFixed/areturn' src/time/time_test.go - - sed -i 's,/etc/protocols,${iana-etc}/etc/protocols,' src/net/lookup_unix.go - sed -i 's,/etc/services,${iana-etc}/etc/services,' src/net/port_unix.go - '' + lib.optionalString stdenv.isLinux '' - sed -i 's,/usr/share/zoneinfo/,${tzdata}/share/zoneinfo/,' src/time/zoneinfo_unix.go - '' + lib.optionalString stdenv.isDarwin '' - substituteInPlace src/race.bash --replace \ - "sysctl machdep.cpu.extfeatures | grep -qv EM64T" true - sed -i 's,strings.Contains(.*sysctl.*,true {,' src/cmd/dist/util.go - sed -i 's,"/etc","'"$TMPDIR"'",' src/os/os_test.go - sed -i 's,/_go_os_test,'"$TMPDIR"'/_go_os_test,' src/os/path_test.go - sed -i '/TestCgoLookupIP/areturn' src/net/cgo_unix_test.go - sed -i '/TestChdirAndGetwd/areturn' src/os/os_test.go - sed -i '/TestRead0/areturn' src/os/os_test.go - sed -i '/TestNohup/areturn' src/os/signal/signal_test.go - rm src/crypto/x509/root_darwin_test.go src/crypto/x509/verify_test.go - - sed -i '/TestGoInstallRebuildsStalePackagesInOtherGOPATH/areturn' src/cmd/go/go_test.go - sed -i '/TestBuildDashIInstallsDependencies/areturn' src/cmd/go/go_test.go - - sed -i '/TestDisasmExtld/areturn' src/cmd/objdump/objdump_test.go - - touch $TMPDIR/group $TMPDIR/hosts $TMPDIR/passwd - - sed -i '1 a\exit 0' misc/cgo/errors/test.bash - - mkdir $topdir/dirtyhacks - cat < $topdir/dirtyhacks/clang - #!${bash}/bin/bash - $(type -P clang) "\$@" 2> >(sed '/ld: warning:.*ignoring unexpected dylib file/ d' 1>&2) - exit $? - EOF - chmod +x $topdir/dirtyhacks/clang - PATH=$topdir/dirtyhacks:$PATH - ''; - - patches = [ - ./remove-tools-1.5.patch - ./creds-test.patch - ./fix-systime-1.6.patch - - # This test checks for the wrong thing with recent tzdata. It's been fixed in master but the patch - # actually works on old versions too. - (fetchpatch { - url = "https://github.com/golang/go/commit/91563ced5897faf729a34be7081568efcfedda31.patch"; - sha256 = "1ny5l3f8a9dpjjrnjnsplb66308a0x13sa0wwr4j6yrkc8j4qxqi"; - }) - ]; - - GOOS = if stdenv.isDarwin then "darwin" else "linux"; - GOARCH = if stdenv.isDarwin then "amd64" - else if stdenv.system == "i686-linux" then "386" - else if stdenv.system == "x86_64-linux" then "amd64" - else if stdenv.isArm then "arm" - else if stdenv.isAarch64 then "arm64" - else throw "Unsupported system"; - GOARM = stdenv.lib.optionalString (stdenv.system == "armv5tel-linux") "5"; - GO386 = 387; # from Arch: don't assume sse2 on i686 - CGO_ENABLED = 1; - GOROOT_BOOTSTRAP = "${goBootstrap}/share/go"; - - # The go build actually checks for CC=*/clang and does something different, so we don't - # just want the generic `cc` here. - CC = if stdenv.isDarwin then "clang" else "cc"; - - installPhase = '' - mkdir -p "$out/bin" - export GOROOT="$(pwd)/" - export GOBIN="$out/bin" - export PATH="$GOBIN:$PATH" - cd ./src - echo Building - ./all.bash - ''; - - preFixup = '' - rm -r $out/share/go/pkg/bootstrap - ''; - - setupHook = ./setup-hook.sh; - - disallowedReferences = [ go_bootstrap ]; - - meta = with stdenv.lib; { - branch = "1.6"; - homepage = http://golang.org/; - description = "The Go Programming language"; - license = licenses.bsd3; - maintainers = with maintainers; [ cstrahan wkennington ]; - platforms = platforms.linux ++ platforms.darwin; - }; -} diff --git a/pkgs/development/compilers/go/1.7.nix b/pkgs/development/compilers/go/1.7.nix deleted file mode 100644 index 82ed9b53c60f..000000000000 --- a/pkgs/development/compilers/go/1.7.nix +++ /dev/null @@ -1,168 +0,0 @@ -{ stdenv, fetchFromGitHub, tzdata, iana-etc, go_bootstrap, runCommand, writeScriptBin -, perl, which, pkgconfig, patch, fetchpatch -, pcre, cacert -, Security, Foundation, bash }: - -let - - inherit (stdenv.lib) optional optionals optionalString; - - clangHack = writeScriptBin "clang" '' - #!${stdenv.shell} - exec ${stdenv.cc}/bin/clang "$@" 2> >(sed '/ld: warning:.*ignoring unexpected dylib file/ d' 1>&2) - ''; - - goBootstrap = runCommand "go-bootstrap" {} '' - mkdir $out - cp -rf ${go_bootstrap}/* $out/ - chmod -R u+w $out - find $out -name "*.c" -delete - cp -rf $out/bin/* $out/share/go/bin/ - ''; - -in - -stdenv.mkDerivation rec { - name = "go-${version}"; - version = "1.7.6"; - - src = fetchFromGitHub { - owner = "golang"; - repo = "go"; - rev = "go${version}"; - sha256 = "1gacjwbs1qbx8x84746qdxx2xwylirvd31ybgagfglfsl77vi4m2"; - }; - - # perl is used for testing go vet - nativeBuildInputs = [ perl which pkgconfig patch ]; - buildInputs = [ cacert pcre ]; - propagatedBuildInputs = optionals stdenv.isDarwin [ Security Foundation ]; - - hardeningDisable = [ "all" ]; - - prePatch = '' - patchShebangs ./ # replace /bin/bash - - # This source produces shell script at run time, - # and thus it is not corrected by patchShebangs. - substituteInPlace misc/cgo/testcarchive/carchive_test.go \ - --replace '#!/usr/bin/env bash' '#!${stdenv.shell}' - - # Disabling the 'os/http/net' tests (they want files not available in - # chroot builds) - rm src/net/{listen,parse}_test.go - rm src/syscall/exec_linux_test.go - # !!! substituteInPlace does not seems to be effective. - # The os test wants to read files in an existing path. Just don't let it be /usr/bin. - sed -i 's,/usr/bin,'"`pwd`", src/os/os_test.go - sed -i 's,/bin/pwd,'"`type -P pwd`", src/os/os_test.go - # Disable the unix socket test - sed -i '/TestShutdownUnix/areturn' src/net/net_test.go - # Disable the hostname test - sed -i '/TestHostname/areturn' src/os/os_test.go - # ParseInLocation fails the test - sed -i '/TestParseInSydney/areturn' src/time/format_test.go - # Remove the api check as it never worked - sed -i '/src\/cmd\/api\/run.go/ireturn nil' src/cmd/dist/test.go - # Remove the coverage test as we have removed this utility - sed -i '/TestCoverageWithCgo/areturn' src/cmd/go/go_test.go - # Remove the timezone naming test - sed -i '/TestLoadFixed/areturn' src/time/time_test.go - - sed -i 's,/etc/protocols,${iana-etc}/etc/protocols,' src/net/lookup_unix.go - sed -i 's,/etc/services,${iana-etc}/etc/services,' src/net/port_unix.go - - # Disable cgo lookup tests not works, they depend on resolver - rm src/net/cgo_unix_test.go - - '' + optionalString stdenv.isLinux '' - sed -i 's,/usr/share/zoneinfo/,${tzdata}/share/zoneinfo/,' src/time/zoneinfo_unix.go - '' + optionalString stdenv.isDarwin '' - substituteInPlace src/race.bash --replace \ - "sysctl machdep.cpu.extfeatures | grep -qv EM64T" true - sed -i 's,strings.Contains(.*sysctl.*,true {,' src/cmd/dist/util.go - sed -i 's,"/etc","'"$TMPDIR"'",' src/os/os_test.go - sed -i 's,/_go_os_test,'"$TMPDIR"'/_go_os_test,' src/os/path_test.go - - sed -i '/TestChdirAndGetwd/areturn' src/os/os_test.go - sed -i '/TestRead0/areturn' src/os/os_test.go - sed -i '/TestNohup/areturn' src/os/signal/signal_test.go - sed -i '/TestCurrent/areturn' src/os/user/user_test.go - sed -i '/TestSystemRoots/areturn' src/crypto/x509/root_darwin_test.go - - sed -i '/TestGoInstallRebuildsStalePackagesInOtherGOPATH/areturn' src/cmd/go/go_test.go - sed -i '/TestBuildDashIInstallsDependencies/areturn' src/cmd/go/go_test.go - - sed -i '/TestDisasmExtld/areturn' src/cmd/objdump/objdump_test.go - - sed -i 's/unrecognized/unknown/' src/cmd/link/internal/ld/lib.go - sed -i 's/unrecognized/unknown/' src/cmd/go/build.go - - touch $TMPDIR/group $TMPDIR/hosts $TMPDIR/passwd - - sed -i '1 a\exit 0' misc/cgo/errors/test.bash - ''; - - patches = - [ ./remove-tools-1.7.patch - ./ssl-cert-file.patch - ./creds-test.patch - - # This test checks for the wrong thing with recent tzdata. It's been fixed in master but the patch - # actually works on old versions too. - (fetchpatch { - url = "https://github.com/golang/go/commit/91563ced5897faf729a34be7081568efcfedda31.patch"; - sha256 = "1ny5l3f8a9dpjjrnjnsplb66308a0x13sa0wwr4j6yrkc8j4qxqi"; - }) - ]; - - GOOS = if stdenv.isDarwin then "darwin" else "linux"; - GOARCH = if stdenv.isDarwin then "amd64" - else if stdenv.system == "i686-linux" then "386" - else if stdenv.system == "x86_64-linux" then "amd64" - else if stdenv.isArm then "arm" - else if stdenv.isAarch64 then "arm64" - else throw "Unsupported system"; - GOARM = optionalString (stdenv.system == "armv5tel-linux") "5"; - GO386 = 387; # from Arch: don't assume sse2 on i686 - CGO_ENABLED = 1; - GOROOT_BOOTSTRAP = "${goBootstrap}/share/go"; - - # The go build actually checks for CC=*/clang and does something different, so we don't - # just want the generic `cc` here. - CC = if stdenv.isDarwin then "clang" else "cc"; - - configurePhase = '' - mkdir -p $out/share/go/bin - export GOROOT=$out/share/go - export GOBIN=$GOROOT/bin - export PATH=$GOBIN:$PATH - ''; - - postConfigure = optionalString stdenv.isDarwin '' - export PATH=${clangHack}/bin:$PATH - ''; - - installPhase = '' - cp -r . $GOROOT - ( cd $GOROOT/src && ./all.bash ) - ''; - - preFixup = '' - rm -r $out/share/go/pkg/bootstrap - ln -s $out/share/go/bin $out/bin - ''; - - setupHook = ./setup-hook.sh; - - disallowedReferences = [ go_bootstrap ]; - - meta = with stdenv.lib; { - branch = "1.7"; - homepage = http://golang.org/; - description = "The Go Programming language"; - license = licenses.bsd3; - maintainers = with maintainers; [ cstrahan wkennington ]; - platforms = platforms.linux ++ platforms.darwin; - }; -} diff --git a/pkgs/development/compilers/go/1.9.nix b/pkgs/development/compilers/go/1.9.nix index f1017d4a48c4..c866212170c4 100644 --- a/pkgs/development/compilers/go/1.9.nix +++ b/pkgs/development/compilers/go/1.9.nix @@ -118,7 +118,7 @@ stdenv.mkDerivation rec { patches = [ ./remove-tools-1.9.patch ./ssl-cert-file-1.9.patch - ./creds-test.patch + ./creds-test-1.9.patch ./remove-test-pie-1.9.patch ./go-1.9-skip-flaky-19608.patch ./go-1.9-skip-flaky-20072.patch diff --git a/pkgs/development/compilers/go/creds-test-1.9.patch b/pkgs/development/compilers/go/creds-test-1.9.patch new file mode 100644 index 000000000000..09f78959ff9c --- /dev/null +++ b/pkgs/development/compilers/go/creds-test-1.9.patch @@ -0,0 +1,14 @@ +diff -ru -x '*~' ./result/src/syscall/creds_test.go go-go1.7.4-src/src/syscall/creds_test.go +--- ./result/src/syscall/creds_test.go 1970-01-01 01:00:01.000000000 +0100 ++++ go-go1.7.4-src/src/syscall/creds_test.go 2016-12-21 14:06:39.559932164 +0100 +@@ -62,8 +62,8 @@ + if sys, ok := err.(*os.SyscallError); ok { + err = sys.Err + } +- if err != syscall.EPERM { +- t.Fatalf("WriteMsgUnix failed with %v, want EPERM", err) ++ if err != syscall.EPERM && err != syscall.EINVAL { ++ t.Fatalf("WriteMsgUnix failed with %v, want EPERM or EINVAL", err) + } + } + diff --git a/pkgs/development/compilers/go/creds-test.patch b/pkgs/development/compilers/go/creds-test.patch index 09f78959ff9c..6a18e6cc42e8 100644 --- a/pkgs/development/compilers/go/creds-test.patch +++ b/pkgs/development/compilers/go/creds-test.patch @@ -1,14 +1,13 @@ -diff -ru -x '*~' ./result/src/syscall/creds_test.go go-go1.7.4-src/src/syscall/creds_test.go ---- ./result/src/syscall/creds_test.go 1970-01-01 01:00:01.000000000 +0100 -+++ go-go1.7.4-src/src/syscall/creds_test.go 2016-12-21 14:06:39.559932164 +0100 -@@ -62,8 +62,8 @@ - if sys, ok := err.(*os.SyscallError); ok { - err = sys.Err +--- source.org/src/syscall/creds_test.go 1970-01-01 01:00:01.000000000 +0100 ++++ source/src/syscall/creds_test.go 2018-02-22 10:43:47.223615358 +0000 +@@ -76,8 +76,8 @@ + if sys, ok := err.(*os.SyscallError); ok { + err = sys.Err + } +- if err != syscall.EPERM { +- t.Fatalf("WriteMsgUnix failed with %v, want EPERM", err) ++ if err != syscall.EPERM && err != syscall.EINVAL { ++ t.Fatalf("WriteMsgUnix failed with %v, want EPERM or EINVAL", err) + } } -- if err != syscall.EPERM { -- t.Fatalf("WriteMsgUnix failed with %v, want EPERM", err) -+ if err != syscall.EPERM && err != syscall.EINVAL { -+ t.Fatalf("WriteMsgUnix failed with %v, want EPERM or EINVAL", err) - } - } diff --git a/pkgs/development/compilers/go/fix-systime-1.6.patch b/pkgs/development/compilers/go/fix-systime-1.6.patch deleted file mode 100644 index e4a3932001e5..000000000000 --- a/pkgs/development/compilers/go/fix-systime-1.6.patch +++ /dev/null @@ -1,45 +0,0 @@ -diff --git a/src/runtime/sys_darwin_amd64.s b/src/runtime/sys_darwin_amd64.s -index e09b906ba5..fa8ff2f65c 100644 ---- a/src/runtime/sys_darwin_amd64.s -+++ b/src/runtime/sys_darwin_amd64.s -@@ -157,6 +157,7 @@ systime: - // Fall back to system call (usually first call in this thread). - MOVQ SP, DI - MOVQ $0, SI -+ MOVQ $0, DX // required as of Sierra; Issue 16570 - MOVL $(0x2000000+116), AX - SYSCALL - CMPQ AX, $0 -diff --git a/src/syscall/syscall_darwin_amd64.go b/src/syscall/syscall_darwin_amd64.go -index 70b53b87f4..79083117b6 100644 ---- a/src/syscall/syscall_darwin_amd64.go -+++ b/src/syscall/syscall_darwin_amd64.go -@@ -26,14 +26,21 @@ func NsecToTimeval(nsec int64) (tv Timeval) { - } - - //sysnb gettimeofday(tp *Timeval) (sec int64, usec int32, err error) --func Gettimeofday(tv *Timeval) (err error) { -- // The tv passed to gettimeofday must be non-nil -- // but is otherwise unused. The answers come back -- // in the two registers. -+func Gettimeofday(tv *Timeval) error { -+ // The tv passed to gettimeofday must be non-nil. -+ // Before macOS Sierra (10.12), tv was otherwise unused and -+ // the answers came back in the two registers. -+ // As of Sierra, gettimeofday return zeros and populates -+ // tv itself. - sec, usec, err := gettimeofday(tv) -- tv.Sec = sec -- tv.Usec = usec -- return err -+ if err != nil { -+ return err -+ } -+ if sec != 0 || usec != 0 { -+ tv.Sec = sec -+ tv.Usec = usec -+ } -+ return nil - } - - func SetKevent(k *Kevent_t, fd, mode, flags int) { diff --git a/pkgs/development/compilers/go/new-binutils.patch b/pkgs/development/compilers/go/new-binutils.patch deleted file mode 100644 index a547e3ab9b9a..000000000000 --- a/pkgs/development/compilers/go/new-binutils.patch +++ /dev/null @@ -1,194 +0,0 @@ -https://github.com/golang/go/issues/13114 -https://gnats.netbsd.org/50777 - ---- a/src/cmd/6l/asm.c 2015-09-23 06:20:05.000000000 +0200 -+++ b/src/cmd/6l/asm.c 2016-03-10 21:00:29.032083210 +0100 -@@ -118,6 +118,8 @@ - return; - - case 256 + R_X86_64_GOTPCREL: -+ case 256 + R_X86_64_GOTPCRELX: -+ case 256 + R_X86_64_REX_GOTPCRELX: - if(targ->type != SDYNIMPORT) { - // have symbol - if(r->off >= 2 && s->p[r->off-2] == 0x8b) { ---- a/src/cmd/8l/asm.c 2015-09-23 06:20:05.000000000 +0200 -+++ b/src/cmd/8l/asm.c 2016-03-10 21:02:16.702064080 +0100 -@@ -115,6 +115,7 @@ - return; - - case 256 + R_386_GOT32: -+ case 256 + R_386_GOT32X: - if(targ->type != SDYNIMPORT) { - // have symbol - if(r->off >= 2 && s->p[r->off-2] == 0x8b) { ---- a/src/cmd/ld/elf.h 2015-09-23 06:20:05.000000000 +0200 -+++ b/src/cmd/ld/elf.h 2016-03-10 21:00:29.033083211 +0100 -@@ -478,32 +478,47 @@ - * Relocation types. - */ - --#define R_X86_64_NONE 0 /* No relocation. */ --#define R_X86_64_64 1 /* Add 64 bit symbol value. */ --#define R_X86_64_PC32 2 /* PC-relative 32 bit signed sym value. */ --#define R_X86_64_GOT32 3 /* PC-relative 32 bit GOT offset. */ --#define R_X86_64_PLT32 4 /* PC-relative 32 bit PLT offset. */ --#define R_X86_64_COPY 5 /* Copy data from shared object. */ --#define R_X86_64_GLOB_DAT 6 /* Set GOT entry to data address. */ --#define R_X86_64_JMP_SLOT 7 /* Set GOT entry to code address. */ --#define R_X86_64_RELATIVE 8 /* Add load address of shared object. */ --#define R_X86_64_GOTPCREL 9 /* Add 32 bit signed pcrel offset to GOT. */ --#define R_X86_64_32 10 /* Add 32 bit zero extended symbol value */ --#define R_X86_64_32S 11 /* Add 32 bit sign extended symbol value */ --#define R_X86_64_16 12 /* Add 16 bit zero extended symbol value */ --#define R_X86_64_PC16 13 /* Add 16 bit signed extended pc relative symbol value */ --#define R_X86_64_8 14 /* Add 8 bit zero extended symbol value */ --#define R_X86_64_PC8 15 /* Add 8 bit signed extended pc relative symbol value */ --#define R_X86_64_DTPMOD64 16 /* ID of module containing symbol */ --#define R_X86_64_DTPOFF64 17 /* Offset in TLS block */ --#define R_X86_64_TPOFF64 18 /* Offset in static TLS block */ --#define R_X86_64_TLSGD 19 /* PC relative offset to GD GOT entry */ --#define R_X86_64_TLSLD 20 /* PC relative offset to LD GOT entry */ --#define R_X86_64_DTPOFF32 21 /* Offset in TLS block */ --#define R_X86_64_GOTTPOFF 22 /* PC relative offset to IE GOT entry */ --#define R_X86_64_TPOFF32 23 /* Offset in static TLS block */ -- --#define R_X86_64_COUNT 24 /* Count of defined relocation types. */ -+#define R_X86_64_NONE 0 -+#define R_X86_64_64 1 -+#define R_X86_64_PC32 2 -+#define R_X86_64_GOT32 3 -+#define R_X86_64_PLT32 4 -+#define R_X86_64_COPY 5 -+#define R_X86_64_GLOB_DAT 6 -+#define R_X86_64_JMP_SLOT 7 -+#define R_X86_64_RELATIVE 8 -+#define R_X86_64_GOTPCREL 9 -+#define R_X86_64_32 10 -+#define R_X86_64_32S 11 -+#define R_X86_64_16 12 -+#define R_X86_64_PC16 13 -+#define R_X86_64_8 14 -+#define R_X86_64_PC8 15 -+#define R_X86_64_DTPMOD64 16 -+#define R_X86_64_DTPOFF64 17 -+#define R_X86_64_TPOFF64 18 -+#define R_X86_64_TLSGD 19 -+#define R_X86_64_TLSLD 20 -+#define R_X86_64_DTPOFF32 21 -+#define R_X86_64_GOTTPOFF 22 -+#define R_X86_64_TPOFF32 23 -+#define R_X86_64_PC64 24 -+#define R_X86_64_GOTOFF64 25 -+#define R_X86_64_GOTPC32 26 -+#define R_X86_64_GOT64 27 -+#define R_X86_64_GOTPCREL64 28 -+#define R_X86_64_GOTPC64 29 -+#define R_X86_64_GOTPLT64 30 -+#define R_X86_64_PLTOFF64 31 -+#define R_X86_64_SIZE32 32 -+#define R_X86_64_SIZE64 33 -+#define R_X86_64_GOTPC32_TLSDEC 34 -+#define R_X86_64_TLSDESC_CALL 35 -+#define R_X86_64_TLSDESC 36 -+#define R_X86_64_IRELATIVE 37 -+#define R_X86_64_PC32_BND 40 -+#define R_X86_64_GOTPCRELX 41 -+#define R_X86_64_REX_GOTPCRELX 42 - - - #define R_ALPHA_NONE 0 /* No reloc */ -@@ -581,39 +596,42 @@ - #define R_ARM_COUNT 38 /* Count of defined relocation types. */ - - --#define R_386_NONE 0 /* No relocation. */ --#define R_386_32 1 /* Add symbol value. */ --#define R_386_PC32 2 /* Add PC-relative symbol value. */ --#define R_386_GOT32 3 /* Add PC-relative GOT offset. */ --#define R_386_PLT32 4 /* Add PC-relative PLT offset. */ --#define R_386_COPY 5 /* Copy data from shared object. */ --#define R_386_GLOB_DAT 6 /* Set GOT entry to data address. */ --#define R_386_JMP_SLOT 7 /* Set GOT entry to code address. */ --#define R_386_RELATIVE 8 /* Add load address of shared object. */ --#define R_386_GOTOFF 9 /* Add GOT-relative symbol address. */ --#define R_386_GOTPC 10 /* Add PC-relative GOT table address. */ --#define R_386_TLS_TPOFF 14 /* Negative offset in static TLS block */ --#define R_386_TLS_IE 15 /* Absolute address of GOT for -ve static TLS */ --#define R_386_TLS_GOTIE 16 /* GOT entry for negative static TLS block */ --#define R_386_TLS_LE 17 /* Negative offset relative to static TLS */ --#define R_386_TLS_GD 18 /* 32 bit offset to GOT (index,off) pair */ --#define R_386_TLS_LDM 19 /* 32 bit offset to GOT (index,zero) pair */ --#define R_386_TLS_GD_32 24 /* 32 bit offset to GOT (index,off) pair */ --#define R_386_TLS_GD_PUSH 25 /* pushl instruction for Sun ABI GD sequence */ --#define R_386_TLS_GD_CALL 26 /* call instruction for Sun ABI GD sequence */ --#define R_386_TLS_GD_POP 27 /* popl instruction for Sun ABI GD sequence */ --#define R_386_TLS_LDM_32 28 /* 32 bit offset to GOT (index,zero) pair */ --#define R_386_TLS_LDM_PUSH 29 /* pushl instruction for Sun ABI LD sequence */ --#define R_386_TLS_LDM_CALL 30 /* call instruction for Sun ABI LD sequence */ --#define R_386_TLS_LDM_POP 31 /* popl instruction for Sun ABI LD sequence */ --#define R_386_TLS_LDO_32 32 /* 32 bit offset from start of TLS block */ --#define R_386_TLS_IE_32 33 /* 32 bit offset to GOT static TLS offset entry */ --#define R_386_TLS_LE_32 34 /* 32 bit offset within static TLS block */ --#define R_386_TLS_DTPMOD32 35 /* GOT entry containing TLS index */ --#define R_386_TLS_DTPOFF32 36 /* GOT entry containing TLS offset */ --#define R_386_TLS_TPOFF32 37 /* GOT entry of -ve static TLS offset */ -- --#define R_386_COUNT 38 /* Count of defined relocation types. */ -+#define R_386_NONE 0 -+#define R_386_32 1 -+#define R_386_PC32 2 -+#define R_386_GOT32 3 -+#define R_386_PLT32 4 -+#define R_386_COPY 5 -+#define R_386_GLOB_DAT 6 -+#define R_386_JMP_SLOT 7 -+#define R_386_RELATIVE 8 -+#define R_386_GOTOFF 9 -+#define R_386_GOTPC 10 -+#define R_386_TLS_TPOFF 14 -+#define R_386_TLS_IE 15 -+#define R_386_TLS_GOTIE 16 -+#define R_386_TLS_LE 17 -+#define R_386_TLS_GD 18 -+#define R_386_TLS_LDM 19 -+#define R_386_TLS_GD_32 24 -+#define R_386_TLS_GD_PUSH 25 -+#define R_386_TLS_GD_CALL 26 -+#define R_386_TLS_GD_POP 27 -+#define R_386_TLS_LDM_32 28 -+#define R_386_TLS_LDM_PUSH 29 -+#define R_386_TLS_LDM_CALL 30 -+#define R_386_TLS_LDM_POP 31 -+#define R_386_TLS_LDO_32 32 -+#define R_386_TLS_IE_32 33 -+#define R_386_TLS_LE_32 34 -+#define R_386_TLS_DTPMOD32 35 -+#define R_386_TLS_DTPOFF32 36 -+#define R_386_TLS_TPOFF32 37 -+#define R_386_TLS_GOTDESC 39 -+#define R_386_TLS_DESC_CALL 40 -+#define R_386_TLS_DESC 41 -+#define R_386_IRELATIVE 42 -+#define R_386_GOT32X 43 - - #define R_PPC_NONE 0 /* No relocation. */ - #define R_PPC_ADDR32 1 ---- a/src/cmd/ld/ldelf.c 2015-09-23 06:20:05.000000000 +0200 -+++ b/src/cmd/ld/ldelf.c 2016-03-10 21:00:29.033083211 +0100 -@@ -888,12 +888,15 @@ - case R('6', R_X86_64_PC32): - case R('6', R_X86_64_PLT32): - case R('6', R_X86_64_GOTPCREL): -+ case R('6', R_X86_64_GOTPCRELX): -+ case R('6', R_X86_64_REX_GOTPCRELX): - case R('8', R_386_32): - case R('8', R_386_PC32): - case R('8', R_386_GOT32): - case R('8', R_386_PLT32): - case R('8', R_386_GOTOFF): - case R('8', R_386_GOTPC): -+ case R('8', R_386_GOT32X): - *siz = 4; - break; - case R('6', R_X86_64_64): diff --git a/pkgs/development/compilers/go/remove-test-pie-1.8.patch b/pkgs/development/compilers/go/remove-test-pie-1.8.patch deleted file mode 100644 index d09e143c74c1..000000000000 --- a/pkgs/development/compilers/go/remove-test-pie-1.8.patch +++ /dev/null @@ -1,23 +0,0 @@ -diff --git a/src/cmd/dist/test.go b/src/cmd/dist/test.go -index c51dcea..8fbec5e 100644 ---- a/src/cmd/dist/test.go -+++ b/src/cmd/dist/test.go -@@ -461,17 +461,5 @@ func (t *tester) registerTests() { - }) - } - -- // Test internal linking of PIE binaries where it is supported. -- if t.goos == "linux" && t.goarch == "amd64" { -- t.tests = append(t.tests, distTest{ -- name: "pie_internal", -- heading: "internal linking of -buildmode=pie", -- fn: func(dt *distTest) error { -- t.addCmd(dt, "src", "go", "test", "reflect", "-short", "-buildmode=pie", "-ldflags=-linkmode=internal", t.timeout(60), t.tags(), t.runFlag("")) -- return nil -- }, -- }) -- } -- - // sync tests - t.tests = append(t.tests, distTest{ - name: "sync_cpu", \ No newline at end of file diff --git a/pkgs/development/compilers/go/remove-test-pie.patch b/pkgs/development/compilers/go/remove-test-pie.patch new file mode 100644 index 000000000000..fb8e116af76f --- /dev/null +++ b/pkgs/development/compilers/go/remove-test-pie.patch @@ -0,0 +1,24 @@ +--- source.org/src/cmd/dist/test.go 2018-02-22 10:40:40.089632339 +0000 ++++ source/src/cmd/dist/test.go 2018-02-22 10:56:53.075193788 +0000 +@@ -526,21 +526,6 @@ + }) + } + +- // Test internal linking of PIE binaries where it is supported. +- if goos == "linux" && goarch == "amd64" && !isAlpineLinux() { +- // Issue 18243: We don't have a way to set the default +- // dynamic linker used in internal linking mode. So +- // this test is skipped on Alpine. +- t.tests = append(t.tests, distTest{ +- name: "pie_internal", +- heading: "internal linking of -buildmode=pie", +- fn: func(dt *distTest) error { +- t.addCmd(dt, "src", t.goTest(), "reflect", "-buildmode=pie", "-ldflags=-linkmode=internal", t.timeout(60)) +- return nil +- }, +- }) +- } +- + // sync tests + t.tests = append(t.tests, distTest{ + name: "sync_cpu", diff --git a/pkgs/development/compilers/go/remove-tools-1.5.patch b/pkgs/development/compilers/go/remove-tools-1.5.patch deleted file mode 100644 index 5aad4b4abc3f..000000000000 --- a/pkgs/development/compilers/go/remove-tools-1.5.patch +++ /dev/null @@ -1,48 +0,0 @@ -diff --git a/src/cmd/go/pkg.go b/src/cmd/go/pkg.go -index 61e3d8d..b8422ad 100644 ---- a/src/cmd/go/pkg.go -+++ b/src/cmd/go/pkg.go -@@ -678,7 +678,7 @@ var goTools = map[string]targetDir{ - "cmd/trace": toTool, - "cmd/vet": toTool, - "cmd/yacc": toTool, -- "golang.org/x/tools/cmd/godoc": toBin, -+ "nixos.org/x/tools/cmd/godoc": toBin, - "code.google.com/p/go.tools/cmd/cover": stalePath, - "code.google.com/p/go.tools/cmd/godoc": stalePath, - "code.google.com/p/go.tools/cmd/vet": stalePath, -diff --git a/src/go/build/build.go b/src/go/build/build.go -index 496fe11..8c81dbd 100644 ---- a/src/go/build/build.go -+++ b/src/go/build/build.go -@@ -1388,7 +1388,7 @@ func init() { - } - - // ToolDir is the directory containing build tools. --var ToolDir = filepath.Join(runtime.GOROOT(), "pkg/tool/"+runtime.GOOS+"_"+runtime.GOARCH) -+var ToolDir = runtime.GOTOOLDIR() - - // IsLocalImport reports whether the import path is - // a local import path, like ".", "..", "./foo", or "../foo". -diff --git a/src/runtime/extern.go b/src/runtime/extern.go -index d346362..fb22b6e 100644 ---- a/src/runtime/extern.go -+++ b/src/runtime/extern.go -@@ -194,6 +194,17 @@ func GOROOT() string { - return defaultGoroot - } - -+// GOTOOLDIR returns the root of the Go tree. -+// It uses the GOTOOLDIR environment variable, if set, -+// or else the root used during the Go build. -+func GOTOOLDIR() string { -+ s := gogetenv("GOTOOLDIR") -+ if s != "" { -+ return s -+ } -+ return GOROOT() + "/pkg/tool/" + GOOS + "_" + GOARCH -+} -+ - // Version returns the Go tree's version string. - // It is either the commit hash and date at the time of the build or, - // when possible, a release tag like "go1.3". diff --git a/pkgs/development/compilers/go/remove-tools-1.7.patch b/pkgs/development/compilers/go/remove-tools-1.7.patch deleted file mode 100644 index b53e48e1a515..000000000000 --- a/pkgs/development/compilers/go/remove-tools-1.7.patch +++ /dev/null @@ -1,35 +0,0 @@ -diff --git a/src/go/build/build.go b/src/go/build/build.go -index 9706b8b..f250751 100644 ---- a/src/go/build/build.go -+++ b/src/go/build/build.go -@@ -1513,7 +1513,7 @@ func init() { - } - - // ToolDir is the directory containing build tools. --var ToolDir = filepath.Join(runtime.GOROOT(), "pkg/tool/"+runtime.GOOS+"_"+runtime.GOARCH) -+var ToolDir = runtime.GOTOOLDIR() - - // IsLocalImport reports whether the import path is - // a local import path, like ".", "..", "./foo", or "../foo". -diff --git a/src/runtime/extern.go b/src/runtime/extern.go -index 441dcd9..a50277e 100644 ---- a/src/runtime/extern.go -+++ b/src/runtime/extern.go -@@ -230,6 +230,17 @@ func GOROOT() string { - return sys.DefaultGoroot - } - -+// GOTOOLDIR returns the root of the Go tree. -+// It uses the GOTOOLDIR environment variable, if set, -+// or else the root used during the Go build. -+func GOTOOLDIR() string { -+ s := gogetenv("GOTOOLDIR") -+ if s != "" { -+ return s -+ } -+ return GOROOT() + "/pkg/tool/" + GOOS + "_" + GOARCH -+} -+ - // Version returns the Go tree's version string. - // It is either the commit hash and date at the time of the build or, - // when possible, a release tag like "go1.3". diff --git a/pkgs/development/compilers/go/remove-tools-1.8.patch b/pkgs/development/compilers/go/remove-tools-1.8.patch deleted file mode 100644 index b53e48e1a515..000000000000 --- a/pkgs/development/compilers/go/remove-tools-1.8.patch +++ /dev/null @@ -1,35 +0,0 @@ -diff --git a/src/go/build/build.go b/src/go/build/build.go -index 9706b8b..f250751 100644 ---- a/src/go/build/build.go -+++ b/src/go/build/build.go -@@ -1513,7 +1513,7 @@ func init() { - } - - // ToolDir is the directory containing build tools. --var ToolDir = filepath.Join(runtime.GOROOT(), "pkg/tool/"+runtime.GOOS+"_"+runtime.GOARCH) -+var ToolDir = runtime.GOTOOLDIR() - - // IsLocalImport reports whether the import path is - // a local import path, like ".", "..", "./foo", or "../foo". -diff --git a/src/runtime/extern.go b/src/runtime/extern.go -index 441dcd9..a50277e 100644 ---- a/src/runtime/extern.go -+++ b/src/runtime/extern.go -@@ -230,6 +230,17 @@ func GOROOT() string { - return sys.DefaultGoroot - } - -+// GOTOOLDIR returns the root of the Go tree. -+// It uses the GOTOOLDIR environment variable, if set, -+// or else the root used during the Go build. -+func GOTOOLDIR() string { -+ s := gogetenv("GOTOOLDIR") -+ if s != "" { -+ return s -+ } -+ return GOROOT() + "/pkg/tool/" + GOOS + "_" + GOARCH -+} -+ - // Version returns the Go tree's version string. - // It is either the commit hash and date at the time of the build or, - // when possible, a release tag like "go1.3". diff --git a/pkgs/development/compilers/go/ssl-cert-file.patch b/pkgs/development/compilers/go/ssl-cert-file.patch deleted file mode 100644 index 052655eed52c..000000000000 --- a/pkgs/development/compilers/go/ssl-cert-file.patch +++ /dev/null @@ -1,80 +0,0 @@ -diff --git a/src/crypto/x509/root_cgo_darwin.go b/src/crypto/x509/root_cgo_darwin.go -index a4b33c7..9700b75 100644 ---- a/src/crypto/x509/root_cgo_darwin.go -+++ b/src/crypto/x509/root_cgo_darwin.go -@@ -151,11 +151,20 @@ int FetchPEMRoots(CFDataRef *pemRoots) { - import "C" - import ( - "errors" -+ "io/ioutil" -+ "os" - "unsafe" - ) - - func loadSystemRoots() (*CertPool, error) { - roots := NewCertPool() -+ if file := os.Getenv("NIX_SSL_CERT_FILE"); file != "" { -+ data, err := ioutil.ReadFile(file) -+ if err == nil { -+ roots.AppendCertsFromPEM(data) -+ return roots, nil -+ } -+ } - - var data C.CFDataRef = nil - err := C.FetchPEMRoots(&data) -diff --git a/src/crypto/x509/root_darwin.go b/src/crypto/x509/root_darwin.go -index 66cdb5e..bb28036 100644 ---- a/src/crypto/x509/root_darwin.go -+++ b/src/crypto/x509/root_darwin.go -@@ -61,17 +61,25 @@ func execSecurityRoots() (*CertPool, error) { - println(fmt.Sprintf("crypto/x509: %d certs have a trust policy", len(hasPolicy))) - } - -- cmd := exec.Command("/usr/bin/security", "find-certificate", "-a", "-p", "/System/Library/Keychains/SystemRootCertificates.keychain") -- data, err := cmd.Output() -- if err != nil { -- return nil, err -- } -- - var ( - mu sync.Mutex - roots = NewCertPool() - numVerified int // number of execs of 'security verify-cert', for debug stats - ) - -+ if file := os.Getenv("NIX_SSL_CERT_FILE"); file != "" { -+ data, err := ioutil.ReadFile(file) -+ if err == nil { -+ roots.AppendCertsFromPEM(data) -+ return roots, nil -+ } -+ } -+ -+ cmd := exec.Command("/usr/bin/security", "find-certificate", "-a", "-p", "/System/Library/Keychains/SystemRootCertificates.keychain") -+ data, err := cmd.Output() -+ if err != nil { -+ return nil, err -+ } -+ - blockCh := make(chan *pem.Block) - var wg sync.WaitGroup -diff --git a/src/crypto/x509/root_unix.go b/src/crypto/x509/root_unix.go -index 7bcb3d6..3986e1a 100644 ---- a/src/crypto/x509/root_unix.go -+++ b/src/crypto/x509/root_unix.go -@@ -24,6 +24,14 @@ func (c *Certificate) systemVerify(opts *VerifyOptions) (chains [][]*Certificate - - func loadSystemRoots() (*CertPool, error) { - roots := NewCertPool() -+ if file := os.Getenv("NIX_SSL_CERT_FILE"); file != "" { -+ data, err := ioutil.ReadFile(file) -+ if err == nil { -+ roots.AppendCertsFromPEM(data) -+ return roots, nil -+ } -+ } -+ - var firstErr error - for _, file := range certFiles { - data, err := ioutil.ReadFile(file) diff --git a/pkgs/development/compilers/go/strip.patch b/pkgs/development/compilers/go/strip.patch deleted file mode 100644 index 7b036802d51c..000000000000 --- a/pkgs/development/compilers/go/strip.patch +++ /dev/null @@ -1,12 +0,0 @@ -diff --git a/src/cmd/go/build.go b/src/cmd/go/build.go -index 0b14725..a7608ce 100644 ---- a/src/cmd/go/build.go -+++ b/src/cmd/go/build.go -@@ -2310,6 +2310,7 @@ func (gcToolchain) ld(b *builder, root *action, out string, allactions []*action - } - } - var ldflags []string -+ ldflags = append(ldflags, "-s") - if buildContext.InstallSuffix != "" { - ldflags = append(ldflags, "-installsuffix", buildContext.InstallSuffix) - } diff --git a/pkgs/development/compilers/graalvm/default.nix b/pkgs/development/compilers/graalvm/default.nix new file mode 100644 index 000000000000..ce324b353ec5 --- /dev/null +++ b/pkgs/development/compilers/graalvm/default.nix @@ -0,0 +1,206 @@ +{ stdenv, lib, fetchFromGitHub, fetchhg, fetchurl, mercurial, python27, zlib, makeWrapper, oraclejdk8 }: + +let + # pre-download some cache entries ('mx' will not be able to download under nixbld1) + makeMxCache = list: + stdenv.mkDerivation { + name = "mx-cache"; + buildCommand = '' + mkdir $out + ${lib.concatMapStrings ({url, name, sha1}: '' + ln -s ${fetchurl { inherit url sha1; }} $out/${name} + echo -n ${sha1} > $out/${name}.sha1 + '') list} + ''; + }; + + jvmci8-mxcache = [ + rec { sha1 = "66215826a684eb6866d4c14a5a4f9c344f1d1eef"; name = "JACOCOCORE_${sha1}.jar"; url = mirror://maven/org/jacoco/org.jacoco.core/0.7.9/org.jacoco.core-0.7.9.jar; } + rec { sha1 = "a365ee459836b2aa18028929923923d15f0c3af9"; name = "JACOCOCORE.sources_${sha1}.jar"; url = mirror://maven/org/jacoco/org.jacoco.core/0.7.9/org.jacoco.core-0.7.9-sources.jar; } + rec { sha1 = "8a7f78fdf2a4e58762890d8e896a9298c2980c10"; name = "JACOCOREPORT_${sha1}.jar"; url = mirror://maven/org/jacoco/org.jacoco.report/0.7.9/org.jacoco.report-0.7.9.jar; } + rec { sha1 = "e6703ef288523a8e63fa756d8adeaa70858d41b0"; name = "JACOCOREPORT.sources_${sha1}.jar"; url = mirror://maven/org/jacoco/org.jacoco.report/0.7.9/org.jacoco.report-0.7.9-sources.jar; } + rec { sha1 = "306816fb57cf94f108a43c95731b08934dcae15c"; name = "JOPTSIMPLE_4_6_${sha1}.jar"; url = mirror://maven/net/sf/jopt-simple/jopt-simple/4.6/jopt-simple-4.6.jar; } + rec { sha1 = "9cd14a61d7aa7d554f251ef285a6f2c65caf7b65"; name = "JOPTSIMPLE_4_6.sources_${sha1}.jar"; url = mirror://maven/net/sf/jopt-simple/jopt-simple/4.6/jopt-simple-4.6-sources.jar; } + rec { sha1 = "b852fb028de645ad2852bbe998e084d253f450a5"; name = "JMH_GENERATOR_ANNPROCESS_1_18_${sha1}.jar"; url = mirror://maven/org/openjdk/jmh/jmh-generator-annprocess/1.18/jmh-generator-annprocess-1.18.jar; } + rec { sha1 = "d455b0dc6108b5e6f1fb4f6cf1c7b4cbedbecc97"; name = "JMH_GENERATOR_ANNPROCESS_1_18.sources_${sha1}.jar"; url = mirror://maven/org/openjdk/jmh/jmh-generator-annprocess/1.18/jmh-generator-annprocess-1.18-sources.jar; } + rec { sha1 = "702b8525fcf81454235e5e2fa2a35f15ffc0ec7e"; name = "ASM_DEBUG_ALL_${sha1}.jar"; url = mirror://maven/org/ow2/asm/asm-debug-all/5.0.4/asm-debug-all-5.0.4.jar; } + rec { sha1 = "ec2544ab27e110d2d431bdad7d538ed509b21e62"; name = "COMMONS_MATH3_3_2_${sha1}.jar"; url = mirror://maven/org/apache/commons/commons-math3/3.2/commons-math3-3.2.jar; } + rec { sha1 = "cd098e055bf192a60c81d81893893e6e31a6482f"; name = "COMMONS_MATH3_3_2.sources_${sha1}.jar"; url = mirror://maven/org/apache/commons/commons-math3/3.2/commons-math3-3.2-sources.jar; } + rec { sha1 = "0174aa0077e9db596e53d7f9ec37556d9392d5a6"; name = "JMH_1_18_${sha1}.jar"; url = mirror://maven/org/openjdk/jmh/jmh-core/1.18/jmh-core-1.18.jar; } + rec { sha1 = "7ff1e1aafea436b6aa8b29a8b8f1c2d66be26f5b"; name = "JMH_1_18.sources_${sha1}.jar"; url = mirror://maven/org/openjdk/jmh/jmh-core/1.18/jmh-core-1.18-sources.jar; } + rec { sha1 = "2973d150c0dc1fefe998f834810d68f278ea58ec"; name = "JUNIT_${sha1}.jar"; url = https://lafo.ssw.uni-linz.ac.at/pub/graal-external-deps/junit-4.12.jar; } + rec { sha1 = "a6c32b40bf3d76eca54e3c601e5d1470c86fcdfa"; name = "JUNIT.sources_${sha1}.jar"; url = https://lafo.ssw.uni-linz.ac.at/pub/graal-external-deps/junit-4.12-sources.jar; } + rec { sha1 = "42a25dc3219429f0e5d060061f71acb49bf010a0"; name = "HAMCREST_${sha1}.jar"; url = https://lafo.ssw.uni-linz.ac.at/pub/graal-external-deps/hamcrest-core-1.3.jar; } + rec { sha1 = "1dc37250fbc78e23a65a67fbbaf71d2e9cbc3c0b"; name = "HAMCREST.sources_${sha1}.jar"; url = https://lafo.ssw.uni-linz.ac.at/pub/graal-external-deps/hamcrest-core-1.3-sources.jar; } + rec { sha1 = "0d031013db9a80d6c88330c42c983fbfa7053193"; name = "hsdis_${sha1}.so"; url = https://lafo.ssw.uni-linz.ac.at/pub/hsdis/intel/hsdis-amd64-linux-0d031013db9a80d6c88330c42c983fbfa7053193.so; } + ]; + + graal-mxcache = jvmci8-mxcache ++ [ + rec { sha1 = "f2cfb09cee12469ff64f0d698b13de19903bb4f7"; name = "NanoHTTPD-WebSocket_${sha1}.jar"; url = mirror://maven/org/nanohttpd/nanohttpd-websocket/2.3.1/nanohttpd-websocket-2.3.1.jar; } + rec { sha1 = "a8d54d1ca554a77f377eff6bf9e16ca8383c8f6c"; name = "NanoHTTPD_${sha1}.jar"; url = mirror://maven/org/nanohttpd/nanohttpd/2.3.1/nanohttpd-2.3.1.jar; } + rec { sha1 = "aca5eb39e2a12fddd6c472b240afe9ebea3a6733"; name = "org.json_${sha1}.jar"; url = mirror://maven/org/json/json/20160810/json-20160810.jar; } + rec { sha1 = "fdedd5f2522122102f0b3db85fe7aa563a009926"; name = "JLINE_${sha1}.jar"; url = mirror://maven/jline/jline/2.14.5/jline-2.14.5.jar; } + rec { sha1 = "476d9a44cd19d6b55f81571077dfa972a4f8a083"; name = "JAVA_ALLOCATION_INSTRUMENTER_${sha1}.jar"; url = https://lafo.ssw.uni-linz.ac.at/pub/graal-external-deps/java-allocation-instrumenter/java-allocation-instrumenter-8f0db117e64e.jar; } + rec { sha1 = "0da08b8cce7bbf903602a25a3a163ae252435795"; name = "ASM5_${sha1}.jar"; url = https://lafo.ssw.uni-linz.ac.at/pub/graal-external-deps/asm-5.0.4.jar; } + rec { sha1 = "396ce0c07ba2b481f25a70195c7c94922f0d1b0b"; name = "ASM_TREE5_${sha1}.jar"; url = https://lafo.ssw.uni-linz.ac.at/pub/graal-external-deps/asm-tree-5.0.4.jar; } + rec { sha1 = "280c265b789e041c02e5c97815793dfc283fb1e6"; name = "LIBFFI_${sha1}.tar.gz"; url = https://lafo.ssw.uni-linz.ac.at/pub/graal-external-deps/libffi-3.2.1.tar.gz; } + rec { sha1 = "616a4fca49c5d610a3354e78cd97e7627024bb66"; name = "GSON_SHADOWED_${sha1}.jar"; url = https://lafo.ssw.uni-linz.ac.at/pub/graal-external-deps/gson-shadowed-2.2.4.jar; } + rec { sha1 = "b13337a4ffd095c2e27ea401dc6edfca0d23a6e4"; name = "GSON_SHADOWED.sources_${sha1}.jar"; url = https://lafo.ssw.uni-linz.ac.at/pub/graal-external-deps/gson-shadowed-2.2.4-sources.jar; } + ]; + +in rec { + + mx = stdenv.mkDerivation { + name = "mx"; + src = fetchFromGitHub { + owner = "graalvm"; + repo = "mx"; + rev = "22557cf7ec417c49aca20c13a9123045005d72d0"; # HEAD at 2018-02-16 + sha256 = "070647ih2qzcssj7yripbg1w9bjwi1rcp1blx5z3jbp1shrr6563"; + }; + nativeBuildInputs = [ makeWrapper ]; + buildPhase = '' + substituteInPlace mx --replace /bin/pwd pwd + ''; + installPhase = '' + mkdir -p $out/bin + cp -dpR * $out/bin + wrapProgram $out/bin/mx --prefix PATH : ${lib.makeBinPath [ python27 mercurial ]} + ''; + meta = with stdenv.lib; { + homepage = https://github.com/graalvm/mx; + description = "Command-line tool used for the development of Graal projects"; + license = licenses.unfree; + platforms = python27.meta.platforms; + }; + }; + + # copy of pkgs.oraclejvm8 with JVMCI interface (TODO: it should work with pkgs.openjdk8 too) + jvmci8 = stdenv.mkDerivation rec { + version = "0.41"; + name = let + n = "jvmci8u161-${version}"; + in if (lib.stringLength n) == (lib.stringLength oraclejdk8.name) then + n + else + throw "length of string `${n}' must be equal to the length of `${oraclejdk8.name}'"; + src = fetchFromGitHub { + owner = "graalvm"; + repo = "graal-jvmci-8"; + rev = "jvmci-${version}"; + sha256 = "0pajf114l8lzczfdzz968c3s1ardiy4q5ya8p2kmwxl06giy95qr"; + }; + buildInputs = [ mx mercurial ]; + postUnpack = '' + # a fake mercurial dir to prevent mx crash and supply the version to mx + ( cd $sourceRoot + hg init + hg add + hg commit -m 'dummy commit' + hg tag ${lib.escapeShellArg src.rev} + hg checkout ${lib.escapeShellArg src.rev} + ) + ''; + NIX_CFLAGS_COMPILE = [ + "-Wno-error=format-overflow" # newly detected by gcc7 + ]; + buildPhase = '' + cp -dpR ${oraclejdk8} writable-copy-of-jdk + chmod +w -R writable-copy-of-jdk + + export MX_ALT_OUTPUT_ROOT=$NIX_BUILD_TOP/mxbuild + export MX_CACHE_DIR=${makeMxCache jvmci8-mxcache} + mx --java-home $(pwd)/writable-copy-of-jdk build + ''; + installPhase = '' + mv jdk1.8.0_*/linux-amd64/product $out + find $out -type f -exec sed -i "s#${oraclejdk8}#$out#g" {} \; + ''; + dontStrip = true; # why? see in oraclejdk derivation + inherit (oraclejdk8) meta; + }; + + graalvm8 = stdenv.mkDerivation rec { + version = "0.31"; + name = let + n = "graal-vm-8-${version}"; + in if (lib.stringLength n) == (lib.stringLength jvmci8.name) then + n + else + throw "length of string `${n}' must be equal to the length of `${jvmci8.name}'"; + src = fetchFromGitHub { + owner = "oracle"; + repo = "graal"; + rev = "vm-enterprise-${version}"; + sha256 = "0rhd6dk2jpbxgdprqvdk991b2k177jrjgyjabdnmv5lzlhczy676"; + }; + buildInputs = [ mx zlib mercurial jvmci8 ]; + postUnpack = '' + # a fake mercurial dir to prevent mx crash and supply the version to mx + ( cd $sourceRoot + hg init + hg add + hg commit -m 'dummy commit' + hg tag ${lib.escapeShellArg src.rev} + hg checkout ${lib.escapeShellArg src.rev} + ) + ''; + buildPhase = '' + # make a copy of jvmci8 + cp -dpR ${jvmci8} $out + chmod +w -R $out + find $out -type f -exec sed -i "s#${jvmci8}#$out#g" {} \; + + export MX_ALT_OUTPUT_ROOT=$NIX_BUILD_TOP/mxbuild + export MX_CACHE_DIR=${makeMxCache graal-mxcache} + ( cd substratevm; mx --java-home $out build --no-daemon ) + ''; + installPhase = '' + # add graal files + mkdir -p $out/jre/tools/{profiler,chromeinspector} + cp -pR substratevm/svmbuild/native-image-root/linux-amd64/bin/* $out/jre/bin/ + cp -pLR substratevm/svmbuild/native-image-root/lib/* $out/jre/lib/ || true # ignore "same file" error when dereferencing symlinks + cp -pLR substratevm/svmbuild/native-image-root/tools/* $out/jre/tools/ + cp -pR $MX_ALT_OUTPUT_ROOT/truffle/dists/* $out/jre/lib/truffle/ + cp -pR $MX_ALT_OUTPUT_ROOT/tools/dists/truffle-profiler* $out/jre/tools/profiler/ + cp -pR $MX_ALT_OUTPUT_ROOT/tools/dists/chromeinspector* $out/jre/tools/chromeinspector/ + echo "name=GraalVM ${version}" > $out/jre/lib/amd64/server/vm.properties + ln -s --relative $out/jre/bin/native-image $out/bin/native-image + cp $out/jre/tools/nfi/bin/libtrufflenfi.so $out/jre/lib/amd64/ + cp -dpR $out/jre/lib/svm/clibraries $out/jre/lib/svm/builder/ + + # BUG workaround http://mail.openjdk.java.net/pipermail/graal-dev/2017-December/005141.html + substituteInPlace $out/jre/lib/security/java.security \ + --replace file:/dev/random file:/dev/./urandom \ + --replace NativePRNGBlocking SHA1PRNG + ''; + dontStrip = true; # why? see in oraclejdk derivation + doInstallCheck = true; + installCheckPhase = '' + echo ${lib.escapeShellArg '' + public class HelloWorld { + public static void main(String[] args) { + System.out.println("Hello World"); + } + } + ''} > HelloWorld.java + $out/bin/javac HelloWorld.java + + # run on JVM with Graal Compiler + $out/bin/java -XX:+UnlockExperimentalVMOptions -XX:+EnableJVMCI -XX:+UseJVMCICompiler HelloWorld + $out/bin/java -XX:+UnlockExperimentalVMOptions -XX:+EnableJVMCI -XX:+UseJVMCICompiler HelloWorld | fgrep 'Hello World' + + # Ahead-Of-Time compilation + $out/bin/native-image -no-server HelloWorld + ./helloworld + ./helloworld | fgrep 'Hello World' + ''; + meta = with stdenv.lib; { + homepage = https://github.com/oracle/graal; + description = "High-Performance Polyglot VM"; + license = licenses.unfree; + maintainers = with maintainers; [ volth ]; + platforms = [ "x86_64-linux" ]; + }; + }; +} diff --git a/pkgs/development/compilers/hhvm/default.nix b/pkgs/development/compilers/hhvm/default.nix index a66b2264f073..1cb28118ccbe 100644 --- a/pkgs/development/compilers/hhvm/default.nix +++ b/pkgs/development/compilers/hhvm/default.nix @@ -53,6 +53,7 @@ stdenv.mkDerivation rec { hphp/runtime/ext/std/*.cpp \ hphp/runtime/ext_zend_compat/php-src/main/*.cpp \ hphp/runtime/ext_zend_compat/php-src/main/*.h + sed '1i#include ' -i third-party/mcrouter/src/mcrouter/lib/cycles/Cycles.h patchShebangs . ''; diff --git a/pkgs/development/compilers/openjdk/7.nix b/pkgs/development/compilers/openjdk/7.nix index 372bb1532698..13f8bcfdb1de 100644 --- a/pkgs/development/compilers/openjdk/7.nix +++ b/pkgs/development/compilers/openjdk/7.nix @@ -69,7 +69,10 @@ let fontconfig perl file bootjdk ]; - NIX_CFLAGS_COMPILE = "-Wno-error=deprecated-declarations"; + NIX_CFLAGS_COMPILE = [ + "-Wno-error=deprecated-declarations" + "-Wno-error=format-overflow" # newly detected by gcc7 + ]; NIX_LDFLAGS = if minimal then null else "-lfontconfig -lXcursor -lXinerama"; diff --git a/pkgs/development/compilers/rust/cargo.nix b/pkgs/development/compilers/rust/cargo.nix index fecf80a44853..46caabf33917 100644 --- a/pkgs/development/compilers/rust/cargo.nix +++ b/pkgs/development/compilers/rust/cargo.nix @@ -19,6 +19,9 @@ rustPlatform.buildRustPackage rec { passthru.rustc = rustc; + # changes hash of vendor directory otherwise on aarch64 + dontUpdateAutotoolsGnuConfigScripts = if stdenv.isAarch64 then "1" else null; + nativeBuildInputs = [ pkgconfig ]; buildInputs = [ cacert file curl python openssl cmake zlib makeWrapper libgit2 ] ++ stdenv.lib.optionals stdenv.isDarwin [ CoreFoundation libiconv ]; diff --git a/pkgs/development/compilers/rust/default.nix b/pkgs/development/compilers/rust/default.nix index 576e42eb08ab..dd15580c11b8 100644 --- a/pkgs/development/compilers/rust/default.nix +++ b/pkgs/development/compilers/rust/default.nix @@ -14,7 +14,7 @@ let }; in rec { rustc = callPackage ./rustc.nix { - inherit llvm targets targetPatches targetToolchains rustPlatform version src; + inherit stdenv llvm targets targetPatches targetToolchains rustPlatform version src; forceBundledLLVM = true; @@ -31,6 +31,7 @@ in rec { cargo = callPackage ./cargo.nix rec { version = cargoVersion; inherit src; + inherit stdenv; inherit rustc; # the rustc that will be wrapped by cargo inherit rustPlatform; # used to build cargo }; diff --git a/pkgs/development/compilers/scala/2.10.nix b/pkgs/development/compilers/scala/2.10.nix index 946a9bedbf51..bac36d61068d 100644 --- a/pkgs/development/compilers/scala/2.10.nix +++ b/pkgs/development/compilers/scala/2.10.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, makeWrapper, jre, gnugrep, coreutils }: stdenv.mkDerivation rec { - name = "scala-2.10.6"; + name = "scala-2.10.7"; src = fetchurl { url = "http://www.scala-lang.org/files/archive/${name}.tgz"; - sha256 = "0rrdrndnxy8m76gppqh7yr68qfx0kxns5bwc69k4swz6va1zbbal"; + sha256 = "04gi55lzgrhsb78qw8jmnccqim92rw6898knw0a7gfzn2sci30wj"; }; propagatedBuildInputs = [ jre ] ; diff --git a/pkgs/development/compilers/scala/2.11.nix b/pkgs/development/compilers/scala/2.11.nix index 469c8c8e3bc5..1145ebab5245 100644 --- a/pkgs/development/compilers/scala/2.11.nix +++ b/pkgs/development/compilers/scala/2.11.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, makeWrapper, jre, gnugrep, coreutils }: stdenv.mkDerivation rec { - name = "scala-2.11.11"; + name = "scala-2.11.12"; src = fetchurl { url = "http://www.scala-lang.org/files/archive/${name}.tgz"; - sha256 = "02whsszxabyhyrbcmgg3figaxknmfzy4f3wmgrqqwik89jk7q0qj"; + sha256 = "1a4nc4qp9dm4rps47j92hlmxxqskv67qbdmjqc5zd94wd4rps7di"; }; propagatedBuildInputs = [ jre ] ; diff --git a/pkgs/development/compilers/scala/2.9.nix b/pkgs/development/compilers/scala/2.9.nix deleted file mode 100644 index c98e2e75c171..000000000000 --- a/pkgs/development/compilers/scala/2.9.nix +++ /dev/null @@ -1,35 +0,0 @@ -{ stdenv, fetchurl }: - -# at runtime, need jre or jdk - -stdenv.mkDerivation rec { - name = "scala-2.9.3"; - - src = fetchurl { - url = "http://www.scala-lang.org/files/archive/${name}.tgz"; - sha256 = "faaab229f78c945063e8fd31c045bc797c731194296d7a4f49863fd87fc4e7b9"; - }; - - installPhase = '' - mkdir -p $out - rm bin/*.bat - rm lib/scalacheck.jar - mv * $out - ''; - - meta = { - description = "A general purpose programming language"; - longDescription = '' - Scala is a general purpose programming language designed to express - common programming patterns in a concise, elegant, and type-safe way. - It smoothly integrates features of object-oriented and functional - languages, enabling Java and other programmers to be more productive. - Code sizes are typically reduced by a factor of two to three when - compared to an equivalent Java application. - ''; - homepage = http://www.scala-lang.org/; - license = stdenv.lib.licenses.bsd3; - platforms = stdenv.lib.platforms.all; - branch = "2.9"; - }; -} diff --git a/pkgs/development/compilers/swift/default.nix b/pkgs/development/compilers/swift/default.nix index 360f96e12427..fc142a4026bd 100644 --- a/pkgs/development/compilers/swift/default.nix +++ b/pkgs/development/compilers/swift/default.nix @@ -145,7 +145,6 @@ let url = "https://github.com/apple/swift-llbuild/commit/303a89bc6da606c115560921a452686aa0655f5e.diff"; sha256 = "04sw7ym1grzggj1v3xrzr2ljxz8rf9rnn9n5fg1xjbwlrdagkc7m"; }; - in stdenv.mkDerivation rec { name = "swift-${version_friendly}"; @@ -247,6 +246,9 @@ stdenv.mkDerivation rec { # https://bugs.swift.org/browse/SR-5779 sed -i -e 's|"-latomic"|"-Wl,-rpath,${clang.cc.gcc.lib}/lib" "-L${clang.cc.gcc.lib}/lib" "-latomic"|' swift/cmake/modules/AddSwift.cmake + # https://bugs.swift.org/browse/SR-4838 + sed -i -e '30i#include ' lldb/include/lldb/Utility/TaskPool.h + substituteInPlace clang/lib/Driver/ToolChains.cpp \ --replace ' addPathIfExists(D, SysRoot + "/usr/lib", Paths);' \ ' addPathIfExists(D, SysRoot + "/usr/lib", Paths); addPathIfExists(D, "${glibc}/lib", Paths);' @@ -287,7 +289,7 @@ stdenv.mkDerivation rec { # TODO: Use wrappers to get these on the PATH for swift tools, instead ln -s ${clang}/bin/* $out/bin/ - ln -s ${targetPackages.stdenv.cc.bintools}/bin/ar $out/bin/ar + ln -s ${targetPackages.stdenv.cc.bintools.bintools_bin}/bin/ar $out/bin/ar wrapProgram $out/bin/swift \ --suffix C_INCLUDE_PATH : $out/lib/swift/clang/include \ diff --git a/pkgs/development/compilers/yap/default.nix b/pkgs/development/compilers/yap/default.nix index 8e37dc76441b..d93da8cb9965 100644 --- a/pkgs/development/compilers/yap/default.nix +++ b/pkgs/development/compilers/yap/default.nix @@ -13,6 +13,8 @@ stdenv.mkDerivation rec { configureFlags = "--enable-tabling=yes"; + NIX_CFLAGS_COMPILE = [ "-fpermissive" ]; + meta = { homepage = http://www.dcc.fc.up.pt/~vsc/Yap/; description = "A ISO-compatible high-performance Prolog compiler"; diff --git a/pkgs/development/go-modules/generic/default.nix b/pkgs/development/go-modules/generic/default.nix index 6de85495bee3..a6d83fc770c7 100644 --- a/pkgs/development/go-modules/generic/default.nix +++ b/pkgs/development/go-modules/generic/default.nix @@ -196,6 +196,9 @@ go.stdenv.mkDerivation ( find $bin/bin -type f -exec ${removeExpr removeReferences} '{}' + || true ''; + # Disable go cache, which is not reused in nix anyway + GOCACHE = "off"; + shellHook = '' d=$(mktemp -d "--suffix=-$name") '' + toString (map (dep: '' diff --git a/pkgs/development/haskell-modules/configuration-common.nix b/pkgs/development/haskell-modules/configuration-common.nix index 535f962c661a..39897f824059 100644 --- a/pkgs/development/haskell-modules/configuration-common.nix +++ b/pkgs/development/haskell-modules/configuration-common.nix @@ -833,7 +833,7 @@ self: super: { rev = "8b79823c32e234c161baec67fdf7907952ca62b8"; sha256 = "0hyrcyssclkdfcw2kgcark8jl869snwnbrhr9k0a9sbpk72wp7nz"; }; - }).override { language-c = self.language-c_0_7_0; }; + }); # Needs pginit to function and pgrep to verify. tmp-postgres = overrideCabal super.tmp-postgres (drv: { diff --git a/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix b/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix index 56f61fddb33e..c63ec7b70f78 100644 --- a/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix +++ b/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix @@ -197,7 +197,9 @@ self: super: { mono-traversable = addBuildDepend super.mono-traversable self.semigroups; natural-transformation = addBuildDepend super.natural-transformation self.semigroups; optparse-applicative = addBuildDepends super.optparse-applicative [self.semigroups self.fail]; + parsec = addBuildDepends super.parsec [self.fail self.semigroups]; QuickCheck = addBuildDepend super.QuickCheck self.semigroups; + reflection = addBuildDepend super.reflection self.semigroups; semigroups = addBuildDepends (dontCheck super.semigroups) (with self; [hashable tagged text unordered-containers]); texmath = addBuildDepend super.texmath self.network-uri; yesod-auth-oauth2 = overrideCabal super.yesod-auth-oauth2 (drv: { testDepends = (drv.testDepends or []) ++ [ self.load-env self.yesod ]; }); diff --git a/pkgs/development/haskell-modules/configuration-ghc-8.4.x.nix b/pkgs/development/haskell-modules/configuration-ghc-8.4.x.nix index 663f1b686399..bad0d642b06c 100644 --- a/pkgs/development/haskell-modules/configuration-ghc-8.4.x.nix +++ b/pkgs/development/haskell-modules/configuration-ghc-8.4.x.nix @@ -42,88 +42,53 @@ self: super: { unix = null; xhtml = null; - # Use more recent doctest version to fix build errors. - doctest = self.doctest_0_14_0; - doctest_0_14_0 = dontCheck super.doctest_0_14_0; # https://github.com/sol/doctest/issues/189 - QuickCheck = self.QuickCheck_2_11_3; # needed by doctest-0.14.0 - - # https://github.com/tmhedberg/here/pull/22 - here = doJailbreak super.here; - - # https://github.com/pcapriotti/optparse-applicative/issues/288 - optparse-applicative = dontCheck super.optparse-applicative; - - # https://github.com/haskell/test-framework/issues/35 - test-framework-quickcheck2 = doJailbreak super.test-framework-quickcheck2; - - # GHC 8.4.x needs newer versions than LTS-10.x offers by default. - ## haddock: panic! (the 'impossible' happened) - ## (GHC version 8.4.20180122 for x86_64-unknown-linux): - ## extractDecl - ## Ambiguous decl for Arg in class: - ## class Example e where - ## type Arg e :: * - ## {-# MINIMAL evaluateExample #-} - ## evaluateExample :: - ## e - ## -> Params - ## -> ActionWith Arg e -> IO () -> ProgressCallback -> IO Result - ## Matches: - ## [] - ## Call stack: - ## CallStack (from HasCallStack): - ## callStackDoc, called at compiler/utils/Outputable.hs:1150:37 in ghc:Outputable - ## pprPanic, called at utils/haddock/haddock-api/src/Haddock/Interface/Create.hs:1013:16 in main:Haddock.Interface.Create - ## Please report this as a GHC bug: http://www.haskell.org/ghc/reportabug - hspec = dontHaddock (dontCheck super.hspec_2_4_8); # test suite causes an infinite loop - - ## Setup: Encountered missing dependencies: - ## QuickCheck >=2.3 && <2.10 - ## builder for ‘/nix/store/d60y5jwn5bpgk2p8ps23c129dcw7whg6-test-framework-0.8.2.0.drv’ failed with exit code 1 - ## error: build of ‘/nix/store/d60y5jwn5bpgk2p8ps23c129dcw7whg6-test-framework-0.8.2.0.drv’ failed - test-framework = dontCheck self.test-framework_0_8_2_0; - - # Undo the override in `configuration-common.nix`: GHC 8.4 bumps Cabal to 2.1: - # Distribution/Simple/CCompiler.hs:64:10: error: - # • No instance for (Semigroup CDialect) - # arising from the superclasses of an instance declaration - # • In the instance declaration for ‘Monoid CDialect’ - # | - # 64 | instance Monoid CDialect where - # | ^^^^^^^^^^^^^^^ - jailbreak-cabal = super.jailbreak-cabal.override { Cabal = self.Cabal; }; #pkgs.haskell.packages.ghc822.jailbreak-cabal; - ## Shadowed: ## Needs bump to a versioned attribute - ## ## • Could not deduce (Semigroup (Dict a)) ## arising from the superclasses of an instance declaration ## from the context: a constraints = super.constraints_0_10; ## Needs bump to a versioned attribute - ## + ## Issue: https://github.com/sol/doctest/issues/189 + doctest = overrideCabal super.doctest_0_14_1 (drv: { + ## Setup: Encountered missing dependencies: + ## ghc >=7.0 && <8.4 + ## + ## uncaught exception: IOException of type NoSuchThing (cabal: rawSystem: runInteractiveProcess: exec: does not exist (No such file or directory)) + doCheck = false; + }); + + ## Needs bump to a versioned attribute ## • Could not deduce (Semigroup (IterT m a)) ## arising from the superclasses of an instance declaration ## from the context: (Monad m, Monoid a) free = super.free_5; - funcmp = overrideCabal super.funcmp_1_9 (drv: { - ## Needs bump to a versioned attribute - ## - ## Needed for (<>) in prelude + ## Needs bump to a versioned attribute + ## Setup: Encountered missing dependencies: + ## base >=3 && <4.11 + ## Needed for (<>) in prelude + funcmp = super.funcmp_1_9; + + ## Needs bump to a versioned attribute + hspec = overrideCabal super.hspec_2_4_8 (drv: { ## Setup: Encountered missing dependencies: - ## base >=3 && <4.11 - jailbreak = true; + ## hspec-core ==2.4.4, hspec-discover ==2.4.4 + ## + ## error: while evaluating the attribute ‘buildInputs’ of the derivation ‘hspec-2.4.8’ at /home/deepfire/src/nixpkgs/pkgs/stdenv/generic/make-derivation.nix:148:11: + ## while evaluating the attribute ‘buildInputs’ of the derivation ‘stringbuilder-0.5.1’ at /home/deepfire/src/nixpkgs/pkgs/stdenv/generic/make-derivation.nix:148:11: + ## infinite recursion encountered, at undefined position + ## test suite causes an infinite loop + doCheck = false; }); + ## Needs bump to a versioned attribute hspec-core = overrideCabal super.hspec-core_2_4_8 (drv: { - ## Needs bump to a versioned attribute + ## Setup: Encountered missing dependencies: + ## QuickCheck >=2.5.1 && <2.11 ## - ## • No instance for (Semigroup Summary) - ## arising from the superclasses of an instance declaration - ## • In the instance declaration for ‘Monoid Summary’ ## error: while evaluating the attribute ‘buildInputs’ of the derivation ‘hspec-core-2.4.8’ at /home/deepfire/src/nixpkgs/pkgs/stdenv/generic/make-derivation.nix:148:11: ## while evaluating the attribute ‘buildInputs’ of the derivation ‘silently-1.2.5’ at /home/deepfire/src/nixpkgs/pkgs/stdenv/generic/make-derivation.nix:148:11: ## while evaluating the attribute ‘buildInputs’ of the derivation ‘temporary-1.2.1.1’ at /home/deepfire/src/nixpkgs/pkgs/stdenv/generic/make-derivation.nix:148:11: @@ -134,43 +99,33 @@ self: super: { }); ## Needs bump to a versioned attribute - ## - ## breaks hspec: ## Setup: Encountered missing dependencies: - ## hspec-discover ==2.4.7 + ## hspec-discover ==2.4.8 hspec-discover = super.hspec-discover_2_4_8; - lens = overrideCabal super.lens_4_16 (drv: { - ## Needs bump to a versioned attribute - ## - ## • Could not deduce (Apply f) + ## Needs bump to a versioned attribute + ## Setup: Encountered missing dependencies: + ## free ==4.*, template-haskell >=2.4 && <2.13 + lens = super.lens_4_16; + + ## Needs bump to a versioned attribute + ## Setup: Encountered missing dependencies: + ## doctest >=0.11.1 && <0.14 + semigroupoids = super.semigroupoids_5_2_2; + + ## Needs bump to a versioned attribute + ## Issue: https://github.com/haskell/test-framework/issues/35 + test-framework = overrideCabal super.test-framework_0_8_2_0 (drv: { + ## • No instance for (Semigroup (TestOptions' Maybe)) ## arising from the superclasses of an instance declaration - ## from the context: (Contravariant f, Applicative f) - ## Setup: Encountered missing dependencies: - ## ghc >=7.0 && <8.4 - ## /run/current-system/sw/bin/nix-shell: failed to build all dependencies - doCheck = false; - }); - - semigroupoids = overrideCabal super.semigroupoids_5_2_2 (drv: { - ## Needs bump to a versioned attribute + ## • In the instance declaration for ‘Monoid (TestOptions' Maybe)’ ## - ## • Variable not in scope: mappend :: Seq a -> Seq a -> Seq a ## Setup: Encountered missing dependencies: - ## ghc >=7.0 && <8.4 - ## /run/current-system/sw/bin/nix-shell: failed to build all dependencies + ## QuickCheck >=2.3 && <2.10 doCheck = false; }); ## Needs bump to a versioned attribute - ## - ## • No instance for (Semigroup Builder) - ## arising from the superclasses of an instance declaration - ## • In the instance declaration for ‘Monoid Builder’ - stringbuilder = super.stringbuilder_0_5_1; - - ## Needs bump to a versioned attribute - ## ## Module ‘Data.Semigroup’ does not export ‘Monoid(..)’ ## | ## 80 | import Data.Semigroup (Semigroup(..), Monoid(..)) @@ -179,9 +134,8 @@ self: super: { ## On Hackage: + ## On Hackage, awaiting for import tasty = overrideCabal super.tasty (drv: { - ## On Hackage, awaiting for import - ## ## • No instance for (Semigroup OptionSet) ## arising from the superclasses of an instance declaration ## • In the instance declaration for ‘Monoid OptionSet’ @@ -192,9 +146,23 @@ self: super: { ## Upstreamed + ## Upstreamed, awaiting a Hackage release + deriving-compat = overrideCabal super.deriving-compat (drv: { + ## Setup: Encountered missing dependencies: + ## template-haskell >=2.5 && <2.13 + src = pkgs.fetchFromGitHub { + owner = "haskell-compat"; + repo = "deriving-compat"; + rev = "e592c6f8af53866dcf6f5700175a3b02bb4f77d3"; + sha256 = "0h4qadk7fmz5v3lbdsxfbf3ha81f73xn7v0s6wia16ika5yvfggs"; + }; + ## Setup: Encountered missing dependencies: + ## th-abstraction >=0.2.2 && <1 + libraryHaskellDepends = drv.libraryHaskellDepends ++ (with self; [ th-abstraction ]); + }); + + ## Upstreamed, awaiting a Hackage release haskell-gi = overrideCabal super.haskell-gi (drv: { - ## Upstreamed, awaiting a Hackage release - ## ## Setup: Encountered missing dependencies: ## haskell-gi-base ==0.20.* src = pkgs.fetchFromGitHub { @@ -203,18 +171,13 @@ self: super: { rev = "30d2e6415c5b57760f8754cd3003eb07483d60e6"; sha256 = "1l3qm97gcjih695hhj80rbpnd72prnc81lg5y373yj8jk9f6ypbr"; }; - ## Setup: Encountered missing dependencies: - ## ghc >=7.0 && <8.4 - ## /run/current-system/sw/bin/nix-shell: failed to build all dependencies - doCheck = false; }); + ## Upstreamed, awaiting a Hackage release haskell-gi-base = overrideCabal super.haskell-gi-base (drv: { - ## Upstreamed, awaiting a Hackage release - ## ## Setup: Encountered missing dependencies: ## haskell-gi-base ==0.21.* - ## cannot build derivation ‘/nix/store/b3d6yr1rzk4hpzg87yk4n5i4321i824f-gi-cairo-1.0.14.drv’: 1 dependencies couldn't be built + ## cannot build derivation ‘/nix/store/qvnrni6j2sz8z26kmjz1hgxfxvggkvjl-gi-cairo-1.0.14.drv’: 1 dependencies couldn't be built src = pkgs.fetchFromGitHub { owner = "haskell-gi"; repo = "haskell-gi"; @@ -224,9 +187,8 @@ self: super: { prePatch = "cd base; "; }); + ## Upstreamed, awaiting a Hackage release haskell-src-exts = overrideCabal super.haskell-src-exts (drv: { - ## Upstreamed, awaiting a Hackage release - ## ## • Could not deduce (Semigroup (ParseResult m)) ## arising from the superclasses of an instance declaration ## from the context: Monoid m @@ -238,9 +200,24 @@ self: super: { }; }); + ## Upstreamed, awaiting a Hackage release + http-api-data = overrideCabal super.http-api-data (drv: { + ## • No instance for (Semigroup Form) + ## arising from the 'deriving' clause of a data type declaration + ## Possible fix: + src = pkgs.fetchFromGitHub { + owner = "fizruk"; + repo = "http-api-data"; + rev = "83aac9540f4a304927c601c5db12f4dc2bf93816"; + sha256 = "14hy13szr09vsisxi25a4qfajqjwznvn222bqk55dcdlnrgf0zi9"; + }; + ## Setup: Encountered missing dependencies: + ## base >=4.7 && <4.11 + jailbreak = true; + }); + + ## Upstreamed, awaiting a Hackage release lambdacube-compiler = overrideCabal super.lambdacube-compiler (drv: { - ## Upstreamed, awaiting a Hackage release - ## ## Setup: Encountered missing dependencies: ## aeson >=0.9 && <0.12, ## base >=4.7 && <4.10, @@ -255,9 +232,8 @@ self: super: { }; }); + ## Upstreamed, awaiting a Hackage release lambdacube-ir = overrideCabal super.lambdacube-ir (drv: { - ## Upstreamed, awaiting a Hackage release - ## ## Setup: Encountered missing dependencies: ## aeson >=0.9 && <0.12, base >=4.8 && <4.10, vector ==0.11.* src = pkgs.fetchFromGitHub { @@ -269,9 +245,8 @@ self: super: { prePatch = "cd lambdacube-ir.haskell; "; }); + ## Upstreamed, awaiting a Hackage release simple-reflect = overrideCabal super.simple-reflect (drv: { - ## Upstreamed, awaiting a Hackage release - ## ## • No instance for (Semigroup Expr) ## arising from the superclasses of an instance declaration ## • In the instance declaration for ‘Monoid Expr’ @@ -283,9 +258,8 @@ self: super: { }; }); + ## Upstreamed, awaiting a Hackage release singletons = overrideCabal super.singletons (drv: { - ## Upstreamed, awaiting a Hackage release - ## ## Setup: Encountered missing dependencies: ## th-desugar ==1.7.* src = pkgs.fetchFromGitHub { @@ -296,9 +270,21 @@ self: super: { }; }); + ## Upstreamed, awaiting a Hackage release + tar = overrideCabal super.tar (drv: { + ## • No instance for (Semigroup (Entries e)) + ## arising from the superclasses of an instance declaration + ## • In the instance declaration for ‘Monoid (Entries e)’ + src = pkgs.fetchFromGitHub { + owner = "haskell"; + repo = "tar"; + rev = "abf2ccb8f7da0514343a0b2624cabebe081bdfa8"; + sha256 = "0s33lgrr574i1r7zc1jqahnwx3dv47ny30mbx5zfpdzjw0jdl5ny"; + }; + }); + + ## Upstreamed, awaiting a Hackage release th-desugar = overrideCabal super.th-desugar (drv: { - ## Upstreamed, awaiting a Hackage release - ## ## • Could not deduce (MonadIO (DsM q)) ## arising from the 'deriving' clause of a data type declaration ## from the context: Quasi q @@ -310,9 +296,8 @@ self: super: { }; }); + ## Upstreamed, awaiting a Hackage release websockets = overrideCabal super.websockets (drv: { - ## Upstreamed, awaiting a Hackage release - ## ## • No instance for (Semigroup SizeLimit) ## arising from the superclasses of an instance declaration ## • In the instance declaration for ‘Monoid SizeLimit’ @@ -327,9 +312,8 @@ self: super: { ## Unmerged + ## Unmerged. PR: https://github.com/lpsmith/blaze-builder/pull/10 blaze-builder = overrideCabal super.blaze-builder (drv: { - ## Unmerged. PR: https://github.com/lpsmith/blaze-builder/pull/10 - ## ## • No instance for (Semigroup Poke) ## arising from the superclasses of an instance declaration ## • In the instance declaration for ‘Monoid Poke’ @@ -341,9 +325,8 @@ self: super: { }; }); + ## Unmerged. PR: https://github.com/wrengr/bytestring-trie/pull/3 bytestring-trie = overrideCabal super.bytestring-trie (drv: { - ## Unmerged. PR: https://github.com/wrengr/bytestring-trie/pull/3 - ## ## • Could not deduce (Semigroup (Trie a)) ## arising from the superclasses of an instance declaration ## from the context: Monoid a @@ -361,12 +344,11 @@ self: super: { doCheck = false; ## Setup: Encountered missing dependencies: ## data-or ==1.0.* - libraryHaskellDepends = drv.libraryHaskellDepends ++ [ self.data-or ]; + libraryHaskellDepends = drv.libraryHaskellDepends ++ (with self; [ data-or ]); }); + ## Unmerged. PR: https://github.com/gtk2hs/gtk2hs/pull/233 gtk2hs-buildtools = overrideCabal super.gtk2hs-buildtools (drv: { - ## Unmerged. PR: https://github.com/gtk2hs/gtk2hs/pull/233 - ## ## Setup: Encountered missing dependencies: ## Cabal >=1.24.0.0 && <2.1 src = pkgs.fetchFromGitHub { @@ -378,9 +360,8 @@ self: super: { prePatch = "cd tools; "; }); + ## Unmerged. PR: https://github.com/gregorycollins/hashtables/pull/46 hashtables = overrideCabal super.hashtables (drv: { - ## Unmerged. PR: https://github.com/gregorycollins/hashtables/pull/46 - ## ## • No instance for (Semigroup Slot) ## arising from the superclasses of an instance declaration ## • In the instance declaration for ‘Monoid Slot’ @@ -392,41 +373,25 @@ self: super: { }; }); - language-c = overrideCabal super.language-c (drv: { - ## Unmerged. PR: https://github.com/visq/language-c/pull/45 - ## - ## Ambiguous occurrence ‘<>’ - ## It could refer to either ‘Prelude.<>’, - ## imported from ‘Prelude’ at src/Language/C/Pretty.hs:15:8-24 + ## Unmerged. PR: https://github.com/sol/hpack/pull/277 + ## Issue: https://github.com/sol/hpack/issues/276 + hpack = overrideCabal super.hpack (drv: { + ## • No instance for (Semigroup Dependencies) + ## arising from the 'deriving' clause of a data type declaration + ## Possible fix: src = pkgs.fetchFromGitHub { owner = "deepfire"; - repo = "language-c"; - rev = "03b120c64c12946d134017f4922b55c6ab4f52f8"; - sha256 = "1mcv46fq37kkd20rhhdbn837han5knjdsgc7ckqp5r2r9m3vy89r"; + repo = "hpack"; + rev = "acce0cffcc1d165a0fd9f0b83878dfbd622ea0d6"; + sha256 = "1wv0ya1gb1hwd9w8g4z5aig694q3arsqhxv0d4wcp270xnq9ja8y"; }; - ## /bin/sh: cabal: command not found - doCheck = false; - }); - - language-c_0_7_0 = overrideCabal super.language-c_0_7_0 (drv: { - ## Unmerged. PR: https://github.com/visq/language-c/pull/45 - ## - ## Ambiguous occurrence ‘<>’ - ## It could refer to either ‘Prelude.<>’, - ## imported from ‘Prelude’ at src/Language/C/Pretty.hs:15:8-24 - src = pkgs.fetchFromGitHub { - owner = "deepfire"; - repo = "language-c"; - rev = "03b120c64c12946d134017f4922b55c6ab4f52f8"; - sha256 = "1mcv46fq37kkd20rhhdbn837han5knjdsgc7ckqp5r2r9m3vy89r"; - }; - ## /bin/sh: cabal: command not found - doCheck = false; + ## Setup: Encountered missing dependencies: + ## http-client -any, http-client-tls -any, http-types -any + libraryHaskellDepends = drv.libraryHaskellDepends ++ (with self; [ http-client http-client-tls http-types ]); }); + ## Unmerged. PR: https://github.com/hanshoglund/monadplus/pull/3 monadplus = overrideCabal super.monadplus (drv: { - ## Unmerged. PR: https://github.com/hanshoglund/monadplus/pull/3 - ## ## • No instance for (Semigroup (Partial a b)) ## arising from the superclasses of an instance declaration ## • In the instance declaration for ‘Monoid (Partial a b)’ @@ -438,9 +403,8 @@ self: super: { }; }); + ## Unmerged. PR: https://github.com/reflex-frp/reflex/pull/158 reflex = overrideCabal super.reflex (drv: { - ## Unmerged. PR: https://github.com/reflex-frp/reflex/pull/158 - ## ## • Could not deduce (Semigroup (Event t a)) ## arising from the superclasses of an instance declaration ## from the context: (Semigroup a, Reflex t) @@ -463,12 +427,11 @@ self: super: { ## monad-control -any, ## prim-uniq -any, ## reflection -any, - libraryHaskellDepends = drv.libraryHaskellDepends ++ [ self.data-default self.haskell-src-exts self.lens self.monad-control self.prim-uniq self.reflection self.split self.template-haskell self.unbounded-delays ]; + libraryHaskellDepends = drv.libraryHaskellDepends ++ (with self; [ data-default haskell-src-exts lens monad-control prim-uniq reflection split template-haskell unbounded-delays ]); }); + ## Unmerged. PR: https://github.com/ChrisKuklewicz/regex-tdfa/pull/13 regex-tdfa = overrideCabal super.regex-tdfa (drv: { - ## Unmerged. PR: https://github.com/ChrisKuklewicz/regex-tdfa/pull/13 - ## ## • No instance for (Semigroup (CharMap a)) ## arising from the superclasses of an instance declaration ## • In the instance declaration for ‘Monoid (CharMap a)’ @@ -480,9 +443,8 @@ self: super: { }; }); + ## Unmerged. PR: https://github.com/vincenthz/hs-securemem/pull/12 securemem = overrideCabal super.securemem (drv: { - ## Unmerged. PR: https://github.com/vincenthz/hs-securemem/pull/12 - ## ## • No instance for (Semigroup SecureMem) ## arising from the superclasses of an instance declaration ## • In the instance declaration for ‘Monoid SecureMem’ @@ -494,9 +456,8 @@ self: super: { }; }); + ## Unmerged. PR: https://github.com/bos/text-format/pull/21 text-format = overrideCabal super.text-format (drv: { - ## Unmerged. PR: https://github.com/bos/text-format/pull/21 - ## ## • No instance for (Semigroup Format) ## arising from the superclasses of an instance declaration ## • In the instance declaration for ‘Monoid Format’ @@ -508,9 +469,34 @@ self: super: { }; }); + ## Unmerged. PR: https://github.com/vincenthz/hs-tls/pull/270 + tls = overrideCabal super.tls (drv: { + ## • No instance for (Semigroup Credentials) + ## arising from the superclasses of an instance declaration + ## • In the instance declaration for ‘Monoid Credentials’ + src = pkgs.fetchFromGitHub { + owner = "ocheron"; + repo = "hs-tls"; + rev = "763656fbc6c2edabb43fc63d8717960f4b26e6e7"; + sha256 = "0v7f9b78w6prkbscdx5ggjixll9z1zfqzm5x0ap4wvynnflkspqb"; + }; + prePatch = "cd core; "; + }); + + ## Unmerged. PR: https://github.com/Soostone/uri-bytestring/pull/0 + uri-bytestring = overrideCabal super.uri-bytestring (drv: { + ## Setup: Encountered missing dependencies: + ## template-haskell >=2.9 && <2.13 + src = pkgs.fetchFromGitHub { + owner = "koenigmaximilian"; + repo = "uri-bytestring"; + rev = "105d5855bbf9c78d1e48394677b42a058e242fc9"; + sha256 = "144hr12k0d61zpgxv62vwlzy6bfs01fqh7qr4qsbv457sznmbb9d"; + }; + }); + + ## Unmerged. PR: https://github.com/ivan-m/wl-pprint-text/pull/17 wl-pprint-text = overrideCabal super.wl-pprint-text (drv: { - ## Unmerged. PR: https://github.com/ivan-m/wl-pprint-text/pull/17 - ## ## Ambiguous occurrence ‘<>’ ## It could refer to either ‘PP.<>’, ## imported from ‘Prelude.Compat’ at Text/PrettyPrint/Leijen/Text/Monadic.hs:73:1-36 @@ -522,6 +508,34 @@ self: super: { }; }); + ## Unmerged. PR: https://github.com/vincenthz/hs-certificate/pull/89 + x509 = overrideCabal super.x509 (drv: { + ## • No instance for (Semigroup DistinguishedName) + ## arising from the superclasses of an instance declaration + ## • In the instance declaration for ‘Monoid DistinguishedName’ + src = pkgs.fetchFromGitHub { + owner = "bgamari"; + repo = "hs-certificate"; + rev = "2c5f54ba69c8a0531d10f9b37542bf958ede54c9"; + sha256 = "1fakr9gqz8k62rnjdsslfavbqrhn92jq9mahyc91f9zhisxp5kdf"; + }; + prePatch = "cd x509; "; + }); + + ## Unmerged. PR: https://github.com/vincenthz/hs-certificate/pull/89 + x509-store = overrideCabal super.x509-store (drv: { + ## • No instance for (Semigroup CertificateStore) + ## arising from the superclasses of an instance declaration + ## • In the instance declaration for ‘Monoid CertificateStore’ + src = pkgs.fetchFromGitHub { + owner = "bgamari"; + repo = "hs-certificate"; + rev = "2c5f54ba69c8a0531d10f9b37542bf958ede54c9"; + sha256 = "1fakr9gqz8k62rnjdsslfavbqrhn92jq9mahyc91f9zhisxp5kdf"; + }; + prePatch = "cd x509-store; "; + }); + ## Non-code, configuration-only change @@ -549,12 +563,12 @@ self: super: { jailbreak = true; }); - bytes = overrideCabal super.bytes (drv: { - ## Setup: Encountered missing dependencies: - ## ghc >=7.0 && <8.4 - ## /run/current-system/sw/bin/nix-shell: failed to build all dependencies - doCheck = false; - }); + cabal2nix = super.cabal2nix.override { + ## • No instance for (Semigroup (List a)) + ## arising from the 'deriving' clause of a data type declaration + ## Possible fix: + hpack = self.hpack; + }; cabal-doctest = overrideCabal super.cabal-doctest (drv: { ## Setup: Encountered missing dependencies: @@ -564,29 +578,17 @@ self: super: { ChasingBottoms = overrideCabal super.ChasingBottoms (drv: { ## Setup: Encountered missing dependencies: - ## base >=4.2 && <4.11 + ## QuickCheck >=2.3 && <2.11, base >=4.2 && <4.11 jailbreak = true; }); - comonad = overrideCabal super.comonad (drv: { - ## Setup: Encountered missing dependencies: - ## ghc >=7.0 && <8.4 - ## /run/current-system/sw/bin/nix-shell: failed to build all dependencies - doCheck = false; - }); - deepseq-generics = overrideCabal super.deepseq-generics (drv: { + ## Setup: Encountered missing dependencies: + ## base >=4.5 && <4.11 ## https://github.com/haskell-hvr/deepseq-generics/pull/4 jailbreak = true; }); - distributive = overrideCabal super.distributive (drv: { - ## Setup: Encountered missing dependencies: - ## ghc >=7.0 && <8.4 - ## /run/current-system/sw/bin/nix-shell: failed to build all dependencies - doCheck = false; - }); - exception-transformers = overrideCabal super.exception-transformers (drv: { ## Setup: Encountered missing dependencies: ## HUnit >=1.2 && <1.6 @@ -611,12 +613,33 @@ self: super: { jailbreak = true; }); + here = overrideCabal super.here (drv: { + ## Setup: Encountered missing dependencies: + ## base >=4.5 && <4.11 + ## https://github.com/tmhedberg/here/pull/22 + jailbreak = true; + }); + + hnix = overrideCabal super.hnix (drv: { + ## Setup: Encountered missing dependencies: + ## deriving-compat ==0.3.* + jailbreak = true; + }); + integer-logarithms = overrideCabal super.integer-logarithms (drv: { ## Setup: Encountered missing dependencies: ## base >=4.3 && <4.11 jailbreak = true; }); + jailbreak-cabal = super.jailbreak-cabal.override { + ## • No instance for (Semigroup CDialect) + ## arising from the superclasses of an instance declaration + ## • In the instance declaration for ‘Monoid CDialect’ + ## Undo the override in `configuration-common.nix`: GHC 8.4 bumps Cabal to 2.1: + Cabal = self.Cabal; + }; + kan-extensions = overrideCabal super.kan-extensions (drv: { ## Setup: Encountered missing dependencies: ## free ==4.* @@ -641,10 +664,9 @@ self: super: { jailbreak = true; }); - linear = overrideCabal super.linear (drv: { + megaparsec = overrideCabal super.megaparsec (drv: { ## Setup: Encountered missing dependencies: - ## ghc >=7.0 && <8.4 - ## /run/current-system/sw/bin/nix-shell: failed to build all dependencies + ## QuickCheck >=2.7 && <2.11 doCheck = false; }); @@ -666,6 +688,12 @@ self: super: { jailbreak = true; }); + scientific = overrideCabal super.scientific (drv: { + ## Setup: Encountered missing dependencies: + ## QuickCheck >=2.5 && <2.11 + doCheck = false; + }); + tasty-expected-failure = overrideCabal super.tasty-expected-failure (drv: { ## Setup: Encountered missing dependencies: ## base >=4.5 && <4.11 @@ -674,22 +702,30 @@ self: super: { tasty-hedgehog = overrideCabal super.tasty-hedgehog (drv: { ## Setup: Encountered missing dependencies: - ## base >=4.8 && <4.11, tasty ==0.11.* + ## base >=4.8 && <4.11 jailbreak = true; }); + ## Issue: https://github.com/haskell/test-framework/issues/35 + test-framework-quickcheck2 = overrideCabal super.test-framework-quickcheck2 (drv: { + ## Setup: Encountered missing dependencies: + ## QuickCheck >=2.4 && <2.11 + jailbreak = true; + }); + + ## Issue: https://github.com/ChrisPenner/rasa/issues/54 text-lens = overrideCabal super.text-lens (drv: { + ## Failures: + ## test/Spec.hs:136: + ## 1) TextLens.range gets "" if invalid range + ## uncaught exception: ErrorCall (Data.Text.Array.new: size overflow + ## CallStack (from HasCallStack): + ## error, called at libraries/text/Data/Text/Array.hs:132:20 in text-1.2.3.0:Data.Text.Array) + ## Randomized with seed 2114194349 + ## Finished in 0.0017 seconds + doCheck = false; ## Setup: Encountered missing dependencies: - ## base >=4.9.0.0 && <4.10, - ## extra >=1.4.10 && <1.5, - ## hspec >=2.2.4 && <2.3, - ## lens ==4.14.* - jailbreak = true; - }); - - th-abstraction = overrideCabal super.th-abstraction (drv: { - ## Setup: Encountered missing dependencies: - ## template-haskell >=2.5 && <2.13 + ## extra >=1.4.10 && <1.5, lens ==4.14.* jailbreak = true; }); @@ -699,13 +735,6 @@ self: super: { jailbreak = true; }); - trifecta = overrideCabal super.trifecta (drv: { - ## Setup: Encountered missing dependencies: - ## ghc >=7.0 && <8.4 - ## /run/current-system/sw/bin/nix-shell: failed to build all dependencies - doCheck = false; - }); - unliftio-core = overrideCabal super.unliftio-core (drv: { ## Setup: Encountered missing dependencies: ## base >=4.5 && <4.11 @@ -722,4 +751,5 @@ self: super: { ## base >=4.8 && <4.11 jailbreak = true; }); + } diff --git a/pkgs/development/haskell-modules/configuration-hackage2nix.yaml b/pkgs/development/haskell-modules/configuration-hackage2nix.yaml index 9eed0a057777..827c5d72a342 100644 --- a/pkgs/development/haskell-modules/configuration-hackage2nix.yaml +++ b/pkgs/development/haskell-modules/configuration-hackage2nix.yaml @@ -38,7 +38,7 @@ core-packages: - ghcjs-base-0 default-package-overrides: - # LTS Haskell 10.5 + # LTS Haskell 10.7 - abstract-deque ==0.3 - abstract-deque-tests ==0.3 - abstract-par ==0.3.3 @@ -77,7 +77,7 @@ default-package-overrides: - aeson-utils ==0.3.0.2 - aeson-yak ==0.1.1.3 - Agda ==2.5.3 - - airship ==0.9.2 + - airship ==0.9.3 - alarmclock ==0.4.0.3 - alerta ==0.1.0.6 - alerts ==0.1.0.0 @@ -209,7 +209,7 @@ default-package-overrides: - async-extra ==0.2.0.0 - async-refresh ==0.2.0.2 - async-refresh-tokens ==0.3.0.1 - - async-timer ==0.1.4.0 + - async-timer ==0.1.4.1 - atom-basic ==0.2.5 - atom-conduit ==0.5.0.1 - atomic-primops ==0.8.1.1 @@ -351,7 +351,7 @@ default-package-overrides: - Cabal ==2.0.1.1 - cabal-doctest ==1.0.6 - cabal-file-th ==0.2.4 - - cabal-rpm ==0.12 + - cabal-rpm ==0.12.1 - cabal-toolkit ==0.0.5 - cache ==0.1.0.1 - cairo ==0.13.4.2 @@ -367,7 +367,7 @@ default-package-overrides: - cassava-conduit ==0.4.0.1 - cassette ==0.1.0 - cast ==0.1.0.2 - - cayley-client ==0.4.2 + - cayley-client ==0.4.3 - cereal ==0.5.5.0 - cereal-conduit ==0.7.3 - cereal-text ==0.1.0.2 @@ -376,9 +376,9 @@ default-package-overrides: - ChannelT ==0.0.0.4 - charset ==0.3.7.1 - charsetdetect-ae ==1.1.0.3 - - Chart ==1.8.2 - - Chart-cairo ==1.8.2 - - Chart-diagrams ==1.8.2 + - Chart ==1.8.3 + - Chart-cairo ==1.8.3 + - Chart-diagrams ==1.8.3 - chart-unit ==0.5.5.0 - chaselev-deque ==0.5.0.5 - ChasingBottoms ==1.3.1.3 @@ -427,7 +427,7 @@ default-package-overrides: - colour ==2.3.4 - colour-accelerate ==0.2.0.0 - combinatorial ==0.0 - - comfort-graph ==0.0.2.1 + - comfort-graph ==0.0.3 - commutative ==0.0.1.4 - comonad ==5.0.3 - comonads-fd ==4.0 @@ -448,7 +448,7 @@ default-package-overrides: - concurrent-supply ==0.1.8 - cond ==0.4.1.1 - conduit ==1.2.13 - - conduit-algorithms ==0.0.7.1 + - conduit-algorithms ==0.0.7.2 - conduit-combinators ==1.1.2 - conduit-connection ==0.1.0.4 - conduit-extra ==1.2.3.2 @@ -516,7 +516,7 @@ default-package-overrides: - cubicbezier ==0.6.0.5 - cubicspline ==0.1.2 - cublas ==0.4.0.0 - - cuda ==0.9.0.0 + - cuda ==0.9.0.1 - cue-sheet ==1.0.1 - cufft ==0.8.0.0 - curl ==1.3.8 @@ -628,7 +628,7 @@ default-package-overrides: - docopt ==0.7.0.5 - doctemplates ==0.2.1 - doctest ==0.13.0 - - doctest-discover ==0.1.0.7 + - doctest-discover ==0.1.0.8 - doctest-driver-gen ==0.1.0.1 - do-list ==1.0.1 - dom-parser ==3.0.0 @@ -673,12 +673,12 @@ default-package-overrides: - elm-export ==0.6.0.1 - elm-export-persistent ==0.1.2 - emailaddress ==0.2.0.0 - - email-validate ==2.3.2.1 + - email-validate ==2.3.2.2 - enclosed-exceptions ==1.0.2 - EntrezHTTP ==1.0.4 - entropy ==0.3.8 - enummapset ==0.5.2.1 - - enumset ==0.0.4 + - enumset ==0.0.4.1 - envelope ==0.2.2.0 - envparse ==0.4 - envy ==1.3.0.2 @@ -702,7 +702,7 @@ default-package-overrides: - eventful-sql-common ==0.2.0 - eventful-sqlite ==0.2.0 - eventful-test-helpers ==0.2.0 - - event-list ==0.1.1.3 + - event-list ==0.1.2 - eventsource-api ==1.1.1 - eventsource-geteventstore-store ==1.0.4 - eventsource-store-specs ==1.0.1 @@ -719,12 +719,12 @@ default-package-overrides: - executable-path ==0.0.3.1 - exhaustive ==1.1.5 - expiring-cache-map ==0.0.6.1 - - explicit-exception ==0.1.9 + - explicit-exception ==0.1.9.2 - exp-pairs ==0.1.5.2 - extensible ==0.4.7.1 - extensible-effects ==2.1.0.0 - extensible-exceptions ==0.1.1.4 - - extra ==1.6.3 + - extra ==1.6.4 - extractable-singleton ==0.0.1 - extrapolate ==0.3.1 - fail ==4.9.0.0 @@ -735,7 +735,7 @@ default-package-overrides: - fast-logger ==2.4.11 - fast-math ==1.0.2 - fb ==1.1.1 - - fclabels ==2.0.3.2 + - fclabels ==2.0.3.3 - fdo-notify ==0.3.1 - feature-flags ==0.1.0.1 - fedora-haskell-tools ==0.4 @@ -767,7 +767,7 @@ default-package-overrides: - flexible-defaults ==0.0.1.2 - FloatingHex ==0.4 - floatshow ==0.2.4 - - flow ==1.0.10 + - flow ==1.0.11 - fmlist ==0.9.2 - fmt ==0.5.0.0 - fn ==0.3.0.2 @@ -840,7 +840,7 @@ default-package-overrides: - getopt-generics ==0.13.0.1 - ghc-compact ==0.1.0.0 - ghc-core ==0.5.6 - - ghc-events ==0.7.0 + - ghc-events ==0.7.1 - ghc-exactprint ==0.5.6.0 - ghcid ==0.6.10 - ghcjs-base-stub ==0.1.0.4 @@ -865,7 +865,7 @@ default-package-overrides: - giphy-api ==0.5.2.0 - git ==0.2.1 - github ==0.18 - - github-release ==1.1.3 + - github-release ==1.1.4 - github-types ==0.2.1 - github-webhook-handler ==0.0.8 - github-webhook-handler-snap ==0.0.7 @@ -891,7 +891,7 @@ default-package-overrides: - GLURaw ==2.0.0.3 - GLUT ==2.7.0.12 - gluturtle ==0.0.58.1 - - gnuplot ==0.5.5 + - gnuplot ==0.5.5.1 - goggles ==0.1.0.3 - gogol ==0.3.0 - gogol-adexchange-buyer ==0.3.0 @@ -1038,7 +1038,7 @@ default-package-overrides: - hasbolt ==0.1.3.0 - hashable ==1.2.6.1 - hashable-time ==0.2.0.1 - - hashids ==1.0.2.3 + - hashids ==1.0.2.4 - hashmap ==1.3.3 - hashtables ==1.2.2.1 - haskeline ==0.7.4.2 @@ -1154,7 +1154,7 @@ default-package-overrides: - hpio ==0.9.0.5 - hpp ==0.5.1 - hpqtypes ==1.5.1.1 - - hprotoc ==2.4.6 + - hprotoc ==2.4.7 - hquantlib ==0.0.4.0 - hreader ==1.1.0 - hreader-lens ==0.1.3.0 @@ -1318,9 +1318,9 @@ default-package-overrides: - io-streams-haproxy ==1.0.0.2 - ip ==1.1.2 - ip6addr ==0.5.3 - - iproute ==1.7.1 + - iproute ==1.7.2 - IPv6Addr ==1.0.1 - - IPv6DB ==0.2.4 + - IPv6DB ==0.2.5 - ipython-kernel ==0.9.0.1 - irc ==0.6.1.0 - irc-client ==1.0.1.1 @@ -1335,7 +1335,7 @@ default-package-overrides: - ixset ==1.0.7 - ixset-typed ==0.3.1.1 - ix-shapable ==0.1.0 - - jack ==0.7.1.1 + - jack ==0.7.1.3 - jailbreak-cabal ==1.3.2 - javascript-extras ==0.3.2.0 - jmacro ==0.6.14 @@ -1379,7 +1379,7 @@ default-package-overrides: - labels ==0.3.3 - lackey ==0.4.7 - lame ==0.1.1 - - language-c ==0.7.1 + - language-c ==0.7.2 - language-c-quote ==0.12.1 - language-docker ==1.0.0 - language-fortran ==0.5.1 @@ -1387,7 +1387,7 @@ default-package-overrides: - language-haskell-extract ==0.2.4 - language-java ==0.2.8 - language-javascript ==0.6.0.10 - - language-puppet ==1.3.14 + - language-puppet ==1.3.15 - lapack-carray ==0.0 - lapack-ffi ==0.0 - lapack-ffi-tools ==0.0.0.1 @@ -1462,10 +1462,10 @@ default-package-overrides: - lrucache ==1.2.0.0 - lrucaching ==0.3.3 - lucid ==2.9.9 - - lxd-client ==0.1.0.5 + - lxd-client ==0.1.0.6 - lxd-client-config ==0.1.0.1 - lzma ==0.0.0.3 - - lzma-conduit ==1.2.0 + - lzma-conduit ==1.2.1 - machines ==0.6.3 - machines-binary ==0.3.0.3 - machines-directory ==0.2.1.0 @@ -1475,7 +1475,7 @@ default-package-overrides: - mainland-pretty ==0.6.1 - makefile ==1.1.0.0 - mallard ==0.6.1.1 - - managed ==1.0.5 + - managed ==1.0.6 - mandrill ==0.5.3.2 - markdown ==0.1.16 - markdown-unlit ==0.4.1 @@ -1518,7 +1518,7 @@ default-package-overrides: - microsoft-translator ==0.1.1 - microspec ==0.1.0.0 - microstache ==1.0.1.1 - - midi ==0.2.2.1 + - midi ==0.2.2.2 - midi-music-box ==0.0.0.4 - mighty-metropolis ==1.2.0 - milena ==0.5.2.1 @@ -1544,7 +1544,7 @@ default-package-overrides: - model ==0.4.4 - modern-uri ==0.1.2.1 - modify-fasta ==0.8.2.3 - - moesocks ==1.0.0.43 + - moesocks ==1.0.0.44 - mole ==0.0.6 - monad-control ==1.0.2.2 - monad-control-aligned ==0.0.1 @@ -1579,14 +1579,14 @@ default-package-overrides: - monad-time ==0.2 - monad-unlift ==0.2.0 - monad-unlift-ref ==0.2.1 - - mongoDB ==2.3.0.2 + - mongoDB ==2.3.0.4 - monoidal-containers ==0.3.0.2 - monoid-extras ==0.4.2 - monoid-subclasses ==0.4.4 - - monoid-transformer ==0.0.3 + - monoid-transformer ==0.0.4 - mono-traversable ==1.0.8.1 - mono-traversable-instances ==0.1.0.0 - - morte ==1.6.14 + - morte ==1.6.15 - mountpoints ==1.0.2 - mstate ==0.2.7 - mtl ==2.2.1 @@ -1626,7 +1626,7 @@ default-package-overrides: - nettle ==0.2.0 - netwire ==5.0.2 - netwire-input ==0.0.6 - - netwire-input-glfw ==0.0.7 + - netwire-input-glfw ==0.0.8 - network ==2.6.3.3 - network-anonymous-i2p ==0.10.0 - network-anonymous-tor ==0.11.0 @@ -1647,7 +1647,7 @@ default-package-overrides: - network-transport-tests ==0.2.4.2 - network-uri ==2.6.1.0 - newtype ==0.2 - - newtype-generics ==0.5.1 + - newtype-generics ==0.5.2.1 - next-ref ==0.1.0.2 - nfc ==0.1.0 - nicify-lib ==1.0.1 @@ -1658,7 +1658,7 @@ default-package-overrides: - nondeterminism ==1.4 - non-empty ==0.3 - non-empty-sequence ==0.2.0.2 - - non-negative ==0.1.1.2 + - non-negative ==0.1.2 - normaldistribution ==1.1.0.3 - normalization-insensitive ==2.0.1 - NoTrace ==0.3.0.2 @@ -1666,7 +1666,7 @@ default-package-overrides: - n-tuple ==0.0.1.1 - numbers ==3000.2.0.1 - numeric-extras ==0.1 - - numeric-prelude ==0.4.2 + - numeric-prelude ==0.4.3 - numhask ==0.1.4.0 - numhask-range ==0.1.3.0 - NumInstances ==1.4 @@ -1702,9 +1702,9 @@ default-package-overrides: - operational ==0.2.3.5 - operational-class ==0.3.0.0 - opml-conduit ==0.6.0.4 - - optional-args ==1.0.1 + - optional-args ==1.0.2 - options ==1.2.1.1 - - optparse-applicative ==0.14.0.0 + - optparse-applicative ==0.14.1.0 - optparse-generic ==1.2.3 - optparse-simple ==0.1.0 - optparse-text ==0.1.1.0 @@ -1727,16 +1727,16 @@ default-package-overrides: - ParsecTools ==0.0.2.0 - parser-combinators ==0.4.0 - parsers ==0.12.8 - - partial-handler ==1.0.2 + - partial-handler ==1.0.3 - partial-isomorphisms ==0.2.2.1 - partial-order ==0.1.2.1 - - partial-semigroup ==0.3.0.2 + - partial-semigroup ==0.3.0.3 - path ==0.6.1 - path-extra ==0.0.6 - path-io ==1.3.3 - path-pieces ==0.2.1 - path-text-utf8 ==0.0.1.0 - - pathtype ==0.8 + - pathtype ==0.8.1 - pathwalk ==0.3.1.2 - patience ==0.1.1 - pattern-arrows ==0.0.2 @@ -1799,7 +1799,7 @@ default-package-overrides: - pointedlist ==0.6.1 - pointful ==1.0.9 - pointless-fun ==1.1.0.6 - - poll ==0.0 + - poll ==0.0.0.1 - poly-arity ==0.1.0 - polynomials-bernstein ==1.1.2 - polyparse ==1.12 @@ -1831,7 +1831,7 @@ default-package-overrides: - pretty-class ==1.0.1.1 - pretty-hex ==1.0 - prettyprinter ==1.1.1 - - prettyprinter-ansi-terminal ==1.1.1.1 + - prettyprinter-ansi-terminal ==1.1.1.2 - prettyprinter-compat-annotated-wl-pprint ==1 - prettyprinter-compat-ansi-wl-pprint ==1.0.1 - prettyprinter-compat-wl-pprint ==1.0.0.1 @@ -1858,8 +1858,8 @@ default-package-overrides: - prompt ==0.1.1.2 - protobuf ==0.2.1.1 - protobuf-simple ==0.1.0.5 - - protocol-buffers ==2.4.6 - - protocol-buffers-descriptor ==2.4.6 + - protocol-buffers ==2.4.7 + - protocol-buffers-descriptor ==2.4.7 - proto-lens ==0.2.2.0 - proto-lens-arbitrary ==0.1.1.1 - proto-lens-combinators ==0.1.0.8 @@ -1886,7 +1886,7 @@ default-package-overrides: - QuickCheck ==2.10.1 - quickcheck-arbitrary-adt ==0.2.0.0 - quickcheck-assertions ==0.3.0 - - quickcheck-classes ==0.3.2 + - quickcheck-classes ==0.3.3 - quickcheck-combinators ==0.0.2 - quickcheck-instances ==0.3.16.1 - quickcheck-io ==0.2.0 @@ -1983,7 +1983,7 @@ default-package-overrides: - retry ==0.7.6.0 - rev-state ==0.1.2 - rfc5051 ==0.1.0.3 - - riak ==1.1.2.3 + - riak ==1.1.2.4 - riak-protobuf ==0.23.0.0 - RNAlien ==1.3.7 - rng-utils ==0.3.0 @@ -2049,7 +2049,7 @@ default-package-overrides: - servant-exceptions ==0.1.1 - servant-foreign ==0.10.1 - servant-generic ==0.1.0.1 - - servant-js ==0.9.3.1 + - servant-js ==0.9.3.2 - servant-JuicyPixels ==0.3.0.3 - servant-kotlin ==0.1.0.3 - servant-lucid ==0.7.1 @@ -2062,7 +2062,7 @@ default-package-overrides: - servant-static-th ==0.1.0.6 - servant-subscriber ==0.6.0.1 - servant-swagger ==1.1.4 - - servant-swagger-ui ==0.2.4.3.4.0 + - servant-swagger-ui ==0.2.5.3.9.1 - servant-websockets ==1.0.0 - servant-yaml ==0.1.0.0 - serversession ==1.0.1 @@ -2072,13 +2072,13 @@ default-package-overrides: - serversession-frontend-yesod ==1.0 - servius ==1.2.0.3 - ses-html ==0.4.0.0 - - set-cover ==0.0.8 + - set-cover ==0.0.9 - setenv ==0.1.1.3 - setlocale ==1.0.0.5 - set-monad ==0.2.0.0 - sets ==0.0.5.2 - SHA ==1.6.4.2 - - shake ==0.16 + - shake ==0.16.3 - shake-language-c ==0.11.0 - shakespeare ==2.0.15 - shell-conduit ==4.6.1 @@ -2087,7 +2087,7 @@ default-package-overrides: - shikensu ==0.3.8 - shortcut-links ==0.4.2.0 - should-not-typecheck ==2.1.0 - - show-prettyprint ==0.2 + - show-prettyprint ==0.2.0.1 - signal ==0.1.0.4 - silently ==1.2.5 - simple ==0.11.2 @@ -2096,7 +2096,7 @@ default-package-overrides: - simple-sendfile ==0.2.27 - simple-session ==0.10.1.1 - simple-templates ==0.8.0.1 - - singleton-bool ==0.1.2.0 + - singleton-bool ==0.1.3 - singleton-nats ==0.4.0.4 - singletons ==2.3.1 - siphash ==1.0.3 @@ -2123,9 +2123,9 @@ default-package-overrides: - sort ==1.0.0.0 - sorted-list ==0.2.0.0 - sourcemap ==0.1.6 - - sox ==0.2.2.7 + - sox ==0.2.3 - soxlib ==0.0.3 - - sparse-linear-algebra ==0.2.9.8 + - sparse-linear-algebra ==0.2.9.9 - spdx ==0.2.2.0 - special-values ==0.1.0.0 - speculate ==0.3.2 @@ -2170,9 +2170,9 @@ default-package-overrides: - stopwatch ==0.1.0.4 - storable-complex ==0.2.2 - storable-endian ==0.2.6 - - storable-record ==0.0.3.1 + - storable-record ==0.0.4 - storable-tuple ==0.0.3.3 - - storablevector ==0.2.12.1 + - storablevector ==0.2.13 - store ==0.4.3.2 - store-core ==0.4.1 - Strafunski-StrategyLib ==5.0.0.10 @@ -2189,8 +2189,8 @@ default-package-overrides: - strict-concurrency ==0.2.4.2 - strict-types ==0.1.2 - stringable ==0.1.3 - - stringbuilder ==0.5.0 - - string-class ==0.1.6.5 + - stringbuilder ==0.5.1 + - string-class ==0.1.7.0 - string-combinators ==0.6.0.5 - string-conv ==0.1.2 - string-conversions ==0.4.0.1 @@ -2241,7 +2241,7 @@ default-package-overrides: - tasty-expected-failure ==0.11.0.4 - tasty-fail-fast ==0.0.3 - tasty-golden ==2.3.1.2 - - tasty-hedgehog ==0.1.0.1 + - tasty-hedgehog ==0.1.0.2 - tasty-hspec ==1.1.3.3 - tasty-html ==0.4.1.1 - tasty-hunit ==0.9.2 @@ -2310,7 +2310,7 @@ default-package-overrides: - threads ==0.5.1.5 - threads-extras ==0.1.0.2 - threepenny-editors ==0.5.6 - - threepenny-gui ==0.8.2.0 + - threepenny-gui ==0.8.2.1 - threepenny-gui-flexbox ==0.4.2 - th-reify-compat ==0.0.1.3 - th-reify-many ==0.1.8 @@ -2391,7 +2391,7 @@ default-package-overrides: - type-spec ==0.3.0.1 - typography-geometry ==1.0.0.1 - tz ==0.1.3.0 - - tzdata ==0.1.20170320.0 + - tzdata ==0.1.20180122.0 - ua-parser ==0.7.4.1 - uglymemo ==0.1.0.1 - unagi-chan ==0.4.1.0 @@ -2402,7 +2402,7 @@ default-package-overrides: - unexceptionalio ==0.3.0 - unfoldable ==0.9.5 - unfoldable-restricted ==0.0.3 - - unicode ==0.0 + - unicode ==0.0.1 - unicode-show ==0.1.0.2 - unicode-transforms ==0.3.3 - unification-fd ==0.10.0.1 @@ -2410,8 +2410,8 @@ default-package-overrides: - union-find ==0.2 - uniplate ==1.6.12 - uniq-deep ==1.1.0.0 - - Unique ==0.4.7.2 - unique ==0 + - Unique ==0.4.7.2 - unit-constraint ==0.0.0 - units-parser ==0.1.1.2 - universe ==1.0 @@ -2448,21 +2448,21 @@ default-package-overrides: - uuid-types ==1.0.3 - vado ==0.0.9 - validate-input ==0.4.0.0 - - validation ==0.6.2 + - validation ==0.6.3 - validationt ==0.2.0.0 - - validity ==0.4.0.3 + - validity ==0.4.0.4 - validity-aeson ==0.1.0.0 - validity-bytestring ==0.2.0.0 - validity-containers ==0.2.0.0 - validity-path ==0.2.0.2 - validity-scientific ==0.1.0.0 - - validity-text ==0.2.0.0 + - validity-text ==0.2.0.1 - validity-time ==0.1.0.0 - validity-unordered-containers ==0.1.0.0 - validity-uuid ==0.0.0.0 - validity-vector ==0.1.0.0 - varying ==0.7.0.3 - - vault ==0.3.0.7 + - vault ==0.3.1.0 - vcswrapper ==0.1.6 - vector ==0.12.0.1 - vector-algorithms ==0.7.0.1 @@ -2505,7 +2505,7 @@ default-package-overrides: - wai-middleware-crowd ==0.1.4.2 - wai-middleware-metrics ==0.2.4 - wai-middleware-prometheus ==0.3.0 - - wai-middleware-rollbar ==0.8.3 + - wai-middleware-rollbar ==0.8.4 - wai-middleware-static ==0.8.1 - wai-middleware-throttle ==0.2.2.0 - wai-predicates ==0.10.0 @@ -2585,7 +2585,7 @@ default-package-overrides: - xlsx ==0.6.0 - xlsx-tabular ==0.2.2 - xml ==1.3.14 - - xml-basic ==0.1.2 + - xml-basic ==0.1.3 - xml-conduit ==1.7.1.2 - xml-conduit-parse ==0.3.1.2 - xml-conduit-writer ==0.1.1.2 @@ -2612,7 +2612,7 @@ default-package-overrides: - YampaSynth ==0.2 - yeshql ==3.0.1.3 - yesod ==1.4.5 - - yesod-alerts ==0.1.1.0 + - yesod-alerts ==0.1.2.0 - yesod-auth ==1.4.21 - yesod-auth-basic ==0.1.0.2 - yesod-auth-fb ==1.8.1 @@ -2658,7 +2658,7 @@ default-package-overrides: - zeromq4-haskell ==0.7.0 - zim-parser ==0.2.1.0 - zip ==0.2.0 - - zip-archive ==0.3.2.2 + - zip-archive ==0.3.2.4 - zippers ==0.2.5 - ziptastic-client ==0.3.0.3 - ziptastic-core ==0.2.0.3 @@ -2697,7 +2697,6 @@ extra-packages: - hoogle == 5.0.14 # required by hie-hoogle - inline-c < 0.6 # required on GHC 8.0.x - inline-c-cpp < 0.2 # required on GHC 8.0.x - - language-c == 0.7.0 # required by c2hs hack to work around https://github.com/haskell/c2hs/issues/192. - mtl < 2.2 # newer versions require transformers > 0.4.x, which we cannot provide in GHC 7.8.x - mtl-prelude < 2 # required for to build postgrest on mtl 2.1.x platforms - network == 2.6.3.1 # newer versions don't compile with GHC 7.4.x and below diff --git a/pkgs/development/haskell-modules/configuration-nix.nix b/pkgs/development/haskell-modules/configuration-nix.nix index e367b5283554..55f463885bdb 100644 --- a/pkgs/development/haskell-modules/configuration-nix.nix +++ b/pkgs/development/haskell-modules/configuration-nix.nix @@ -488,11 +488,8 @@ self: super: builtins.intersectAttrs super { liquid-fixpoint = disableSharedExecutables super.liquid-fixpoint; liquidhaskell = dontCheck (disableSharedExecutables super.liquidhaskell); - # Haskell OpenCV bindings need contrib code enabled in the C++ library. - opencv = super.opencv.override { opencv3 = pkgs.opencv3.override { enableContrib = true; }; }; - # Without this override, the builds lacks pkg-config. - opencv-extra = addPkgconfigDepend super.opencv-extra (pkgs.opencv3.override { enableContrib = true; }); + opencv-extra = addPkgconfigDepend super.opencv-extra pkgs.opencv3; # Break cyclic reference that results in an infinite recursion. partial-semigroup = dontCheck super.partial-semigroup; diff --git a/pkgs/development/haskell-modules/hackage-packages.nix b/pkgs/development/haskell-modules/hackage-packages.nix index 5382e63bce61..ae8c14f3d8f6 100644 --- a/pkgs/development/haskell-modules/hackage-packages.nix +++ b/pkgs/development/haskell-modules/hackage-packages.nix @@ -2704,23 +2704,6 @@ self: { }) {}; "Chart" = callPackage - ({ mkDerivation, array, base, colour, data-default-class, lens, mtl - , old-locale, operational, time, vector - }: - mkDerivation { - pname = "Chart"; - version = "1.8.2"; - sha256 = "13g27db8ln2n1hr2wvpa855x0x1izk3c10lb85an7972b5lw2hl4"; - libraryHaskellDepends = [ - array base colour data-default-class lens mtl old-locale - operational time vector - ]; - homepage = "https://github.com/timbod7/haskell-chart/wiki"; - description = "A library for generating 2D Charts and Plots"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "Chart_1_8_3" = callPackage ({ mkDerivation, array, base, colour, data-default-class, lens, mtl , old-locale, operational, time, vector }: @@ -2735,27 +2718,9 @@ self: { homepage = "https://github.com/timbod7/haskell-chart/wiki"; description = "A library for generating 2D Charts and Plots"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "Chart-cairo" = callPackage - ({ mkDerivation, array, base, cairo, Chart, colour - , data-default-class, lens, mtl, old-locale, operational, time - }: - mkDerivation { - pname = "Chart-cairo"; - version = "1.8.2"; - sha256 = "1hcg80ddq638cad6m69q61aa0fbj3glnb3a6pbbg8gy4ljfvmn3w"; - libraryHaskellDepends = [ - array base cairo Chart colour data-default-class lens mtl - old-locale operational time - ]; - homepage = "https://github.com/timbod7/haskell-chart/wiki"; - description = "Cairo backend for Charts"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "Chart-cairo_1_8_3" = callPackage ({ mkDerivation, array, base, cairo, Chart, colour , data-default-class, lens, mtl, old-locale, operational, time }: @@ -2770,32 +2735,9 @@ self: { homepage = "https://github.com/timbod7/haskell-chart/wiki"; description = "Cairo backend for Charts"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "Chart-diagrams" = callPackage - ({ mkDerivation, base, blaze-markup, bytestring, Chart, colour - , containers, data-default-class, diagrams-core, diagrams-lib - , diagrams-postscript, diagrams-svg, lens, mtl, old-locale - , operational, svg-builder, SVGFonts, text, time - }: - mkDerivation { - pname = "Chart-diagrams"; - version = "1.8.2"; - sha256 = "0hczp9dj9qs3g72hcgikym1bq3ki90graxfx068h5hds0kn1s66a"; - enableSeparateDataOutput = true; - libraryHaskellDepends = [ - base blaze-markup bytestring Chart colour containers - data-default-class diagrams-core diagrams-lib diagrams-postscript - diagrams-svg lens mtl old-locale operational svg-builder SVGFonts - text time - ]; - homepage = "https://github.com/timbod7/haskell-chart/wiki"; - description = "Diagrams backend for Charts"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "Chart-diagrams_1_8_3" = callPackage ({ mkDerivation, base, blaze-markup, bytestring, Chart, colour , containers, data-default-class, diagrams-core, diagrams-lib , diagrams-postscript, diagrams-svg, lens, mtl, old-locale @@ -2815,7 +2757,6 @@ self: { homepage = "https://github.com/timbod7/haskell-chart/wiki"; description = "Diagrams backend for Charts"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "Chart-gtk" = callPackage @@ -2942,6 +2883,28 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "Clash-Royale-Hack-Cheats" = callPackage + ({ mkDerivation, base, Cabal, cabal-doctest, doctest, hspec + , hspec-discover, lens, QuickCheck, servant, servant-auth + , servant-auth-docs, servant-docs, template-haskell, text + }: + mkDerivation { + pname = "Clash-Royale-Hack-Cheats"; + version = "1.0.1"; + sha256 = "19cvhy78s7vl9b6pdi04nrf4iqxb7a2yivmq5fymdxxvdxg9ykds"; + revision = "2"; + editedCabalFile = "0lhljmc8nn7mrdxyx3645m8gkwkpqvcdkfp5dal9pi90in9kd4wp"; + setupHaskellDepends = [ base Cabal cabal-doctest ]; + libraryHaskellDepends = [ base ]; + testHaskellDepends = [ + base doctest hspec lens QuickCheck servant servant-auth + servant-auth-docs servant-docs template-haskell text + ]; + testToolDepends = [ hspec-discover ]; + description = "spam"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "ClassLaws" = callPackage ({ mkDerivation, base, ChasingBottoms, mtl, QuickCheck }: mkDerivation { @@ -4823,6 +4786,28 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "Eight-Ball-Pool-Hack-Cheats" = callPackage + ({ mkDerivation, base, Cabal, cabal-doctest, doctest, hspec + , hspec-discover, lens, QuickCheck, servant, servant-auth + , servant-auth-docs, servant-docs, template-haskell, text + }: + mkDerivation { + pname = "Eight-Ball-Pool-Hack-Cheats"; + version = "1.0.1"; + sha256 = "0k620c0ia441rfvxaw2q5n43g5pnml4sn1cr1vzclc9iz0mfdy72"; + revision = "2"; + editedCabalFile = "13dkqc5pa7sjf3xfwgs7kajb7f1ai187w35p8pzni5is0hnaxfmz"; + setupHaskellDepends = [ base Cabal cabal-doctest ]; + libraryHaskellDepends = [ base ]; + testHaskellDepends = [ + base doctest hspec lens QuickCheck servant servant-auth + servant-auth-docs servant-docs template-haskell text + ]; + testToolDepends = [ hspec-discover ]; + description = "spam"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "EitherT" = callPackage ({ mkDerivation, base, monad-control, transformers , transformers-base @@ -5318,6 +5303,30 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "Facebook-Password-Hacker-Online-Latest-Version" = callPackage + ({ mkDerivation, base, Cabal, cabal-doctest, doctest, hspec + , hspec-discover, lens, QuickCheck, servant, servant-auth + , servant-auth-docs, servant-docs, template-haskell, text + }: + mkDerivation { + pname = "Facebook-Password-Hacker-Online-Latest-Version"; + version = "1.0.1"; + sha256 = "0xvr2bj800i7ssbn6gbz4pknhakrgifkirf3rsn6ln4g35h29m07"; + revision = "1"; + editedCabalFile = "0p70xim6ay9ffs5s69nw64znridyb7fzdfawh3gp0fzlybzmjypy"; + setupHaskellDepends = [ base Cabal cabal-doctest ]; + libraryHaskellDepends = [ + base lens servant servant-auth servant-docs text + ]; + testHaskellDepends = [ + base doctest hspec lens QuickCheck servant servant-auth + servant-auth-docs servant-docs template-haskell text + ]; + testToolDepends = [ hspec-discover ]; + description = "spam"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "Facts" = callPackage ({ mkDerivation, AC-Angle, base, containers, digits, QuickCheck , template-haskell @@ -5829,6 +5838,28 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "Fortnite-Hack-Cheats-Free-V-Bucks-Generator" = callPackage + ({ mkDerivation, base, Cabal, cabal-doctest, doctest, hspec + , hspec-discover, lens, QuickCheck, servant, servant-auth + , servant-auth-docs, servant-docs, template-haskell, text + }: + mkDerivation { + pname = "Fortnite-Hack-Cheats-Free-V-Bucks-Generator"; + version = "1.0.1"; + sha256 = "02qj2lmf74m0d58fr09grylcmzzygi06rkn37bzpaiqr8fb032js"; + revision = "4"; + editedCabalFile = "1k976a5lnjzxgy486c7msh0d35zj4l3w671n4rivqzr9xfwhmb8d"; + setupHaskellDepends = [ base Cabal cabal-doctest ]; + libraryHaskellDepends = [ base ]; + testHaskellDepends = [ + base doctest hspec lens QuickCheck servant servant-auth + servant-auth-docs servant-docs template-haskell text + ]; + testToolDepends = [ hspec-discover ]; + description = "spam"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "Foster" = callPackage ({ mkDerivation, array, base, cmdtheline, containers, criterion , random, strict @@ -10415,36 +10446,6 @@ self: { }) {}; "IPv6DB" = callPackage - ({ mkDerivation, aeson, attoparsec, base, bytestring, fast-logger - , hedis, hspec, http-client, http-types, IPv6Addr, mtl - , optparse-applicative, text, unordered-containers, vector, wai - , wai-logger, warp - }: - mkDerivation { - pname = "IPv6DB"; - version = "0.2.4"; - sha256 = "1axppdhckdch3kjcmw8dga76v865xccdwsksxfnahg32k613g8zd"; - isLibrary = true; - isExecutable = true; - libraryHaskellDepends = [ - aeson attoparsec base bytestring hedis http-types IPv6Addr mtl text - unordered-containers vector - ]; - executableHaskellDepends = [ - aeson base bytestring fast-logger hedis http-types IPv6Addr mtl - optparse-applicative text unordered-containers vector wai - wai-logger warp - ]; - testHaskellDepends = [ - aeson base hspec http-client http-types vector - ]; - homepage = "http://ipv6db.cybervisible.com"; - description = "A RESTful Web Service for IPv6-related data"; - license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; - }) {}; - - "IPv6DB_0_2_5" = callPackage ({ mkDerivation, aeson, attoparsec, base, bytestring, fast-logger , hedis, hspec, http-client, http-types, IPv6Addr, mtl , optparse-applicative, text, unordered-containers, vector, wai @@ -10957,6 +10958,23 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "JuicyPixels-stbir" = callPackage + ({ mkDerivation, base, c2hs, data-default-class, JuicyPixels + , vector + }: + mkDerivation { + pname = "JuicyPixels-stbir"; + version = "0.1.0.0"; + sha256 = "0jlb72hbiqbnjm5q63ywrw5dljfzpgbw91xk7ijrsfm209pprcqz"; + libraryHaskellDepends = [ + base data-default-class JuicyPixels vector + ]; + libraryToolDepends = [ c2hs ]; + homepage = "https://github.com/mtolly/JuicyPixels-stbir"; + description = "Scale JuicyPixels images with stb_image_resize"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "JuicyPixels-util" = callPackage ({ mkDerivation, base, JuicyPixels, vector }: mkDerivation { @@ -11596,8 +11614,8 @@ self: { ({ mkDerivation, base, containers, hmatrix, vector }: mkDerivation { pname = "Learning"; - version = "0.0.2"; - sha256 = "0gp8c2xwpsnwbhvdwnpiv3pzmg2i12fv4h1x1fna9q4smgnpfjpb"; + version = "0.0.3"; + sha256 = "0mq98i23gcksvbyz2psxixp4jdqjskmjbjc2z8bz175sy8fyp62a"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base containers hmatrix vector ]; @@ -12530,6 +12548,28 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "Mobile-Legends-Hack-Cheats" = callPackage + ({ mkDerivation, base, Cabal, cabal-doctest, doctest, hspec + , hspec-discover, lens, QuickCheck, servant, servant-auth + , servant-auth-docs, servant-docs, template-haskell, text + }: + mkDerivation { + pname = "Mobile-Legends-Hack-Cheats"; + version = "1.0.1"; + sha256 = "1alyhdrliyy6hi88svbnmwf76vl6ipd92r835r2j1qyvbadi63fl"; + revision = "2"; + editedCabalFile = "1vcysv7jsik7i6s8a5jw3fzan0zv8104yv9ggvmlbq5n8sg9yjgq"; + setupHaskellDepends = [ base Cabal cabal-doctest ]; + libraryHaskellDepends = [ base ]; + testHaskellDepends = [ + base doctest hspec lens QuickCheck servant servant-auth + servant-auth-docs servant-docs template-haskell text + ]; + testToolDepends = [ hspec-discover ]; + description = "spam"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "Modulo" = callPackage ({ mkDerivation, base, numeric-prelude }: mkDerivation { @@ -21359,6 +21399,17 @@ self: { license = stdenv.lib.licenses.publicDomain; }) {}; + "acme-zalgo" = callPackage + ({ mkDerivation, array, base, random }: + mkDerivation { + pname = "acme-zalgo"; + version = "0.1.2.1"; + sha256 = "1yd3xrdkxf3hgapi4w5vg79nxmw8y5rnyki5pqi00mca9wjspdhz"; + libraryHaskellDepends = [ array base random ]; + description = "A somewhat flexible Zalgo̐ te̳͜x̥̖̉̓͞t̍̌̔ ̀̃t̴̢̞̜͓̝r̶̬̆̂̒͟á̧̡͎͔̯̰̕n̹̾̓ͬͦ̍͘ṡ̢͓͉ͮ͆l̠̖̹̗̳̖̽̌ͤ͞a͚̭͙̹̲ͭͩt͈͐o̢̭͇͍̟͐ͬ̾ͪ͜r͇.̸̅ͭ̐̀̊ͨ͛"; + license = stdenv.lib.licenses.mit; + }) {}; + "acme-zero" = callPackage ({ mkDerivation }: mkDerivation { @@ -22187,6 +22238,18 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "aeson-options" = callPackage + ({ mkDerivation, aeson, base }: + mkDerivation { + pname = "aeson-options"; + version = "0.0.0"; + sha256 = "0z2r1rnh819wms8l1scv18l178i2y1ixcjm6ir59vir5bl19wxm0"; + libraryHaskellDepends = [ aeson base ]; + homepage = "https://github.com/serokell/aeson-options"; + description = "Options to derive FromJSON/ToJSON instances"; + license = stdenv.lib.licenses.mit; + }) {}; + "aeson-parsec-picky" = callPackage ({ mkDerivation, aeson, base, parsec, scientific, text , unordered-containers, vector @@ -22857,36 +22920,6 @@ self: { }) {}; "airship" = callPackage - ({ mkDerivation, attoparsec, base, base64-bytestring, blaze-builder - , bytestring, bytestring-trie, case-insensitive, containers - , cryptohash, directory, either, filepath, http-date, http-media - , http-types, lifted-base, microlens, mime-types, mmorph - , monad-control, mtl, network, old-locale, random, tasty - , tasty-hunit, tasty-quickcheck, text, time, transformers - , transformers-base, unix, unordered-containers, wai, wai-extra - }: - mkDerivation { - pname = "airship"; - version = "0.9.2"; - sha256 = "02r607yqvr5w6i6hba0ifbc02fshxijd4g46ygird9lsarcr2svp"; - libraryHaskellDepends = [ - attoparsec base base64-bytestring blaze-builder bytestring - bytestring-trie case-insensitive containers cryptohash directory - either filepath http-date http-media http-types lifted-base - microlens mime-types mmorph monad-control mtl network old-locale - random text time transformers transformers-base unix - unordered-containers wai wai-extra - ]; - testHaskellDepends = [ - base bytestring tasty tasty-hunit tasty-quickcheck text - transformers wai - ]; - homepage = "https://github.com/helium/airship/"; - description = "A Webmachine-inspired HTTP library"; - license = stdenv.lib.licenses.mit; - }) {}; - - "airship_0_9_3" = callPackage ({ mkDerivation, attoparsec, base, base64-bytestring, blaze-builder , bytestring, bytestring-trie, case-insensitive, containers , cryptohash, directory, either, filepath, http-date, http-media @@ -22914,7 +22947,6 @@ self: { homepage = "https://github.com/helium/airship/"; description = "A Webmachine-inspired HTTP library"; license = stdenv.lib.licenses.mit; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "airtable-api" = callPackage @@ -29053,6 +29085,27 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "async-combinators" = callPackage + ({ mkDerivation, async, base, hedgehog, HUnit, safe-exceptions + , tasty, tasty-discover, tasty-hedgehog, tasty-hunit, universum + , unliftio-core + }: + mkDerivation { + pname = "async-combinators"; + version = "0.0.0"; + sha256 = "1rj9fahpch74ygkx3lv4282lb775cklxi3c5wys544binnya9v7b"; + libraryHaskellDepends = [ + async base safe-exceptions universum unliftio-core + ]; + testHaskellDepends = [ + base hedgehog HUnit safe-exceptions tasty tasty-discover + tasty-hedgehog tasty-hunit universum + ]; + homepage = "https://github.com/serokell/async-combinators"; + description = "Async combinators"; + license = stdenv.lib.licenses.mpl20; + }) {}; + "async-dejafu" = callPackage ({ mkDerivation, base, concurrency, dejafu, exceptions, HUnit , hunit-dejafu @@ -29193,28 +29246,6 @@ self: { }) {}; "async-timer" = callPackage - ({ mkDerivation, base, containers, criterion, HUnit, lifted-async - , lifted-base, monad-control, safe-exceptions, test-framework - , test-framework-hunit, transformers-base - }: - mkDerivation { - pname = "async-timer"; - version = "0.1.4.0"; - sha256 = "00kdhxq0wpml4f7gdjvr2h8km8i3yj68bawpa229rzpp0y0yp3k3"; - libraryHaskellDepends = [ - base lifted-async lifted-base monad-control safe-exceptions - transformers-base - ]; - testHaskellDepends = [ - base containers criterion HUnit lifted-async test-framework - test-framework-hunit - ]; - homepage = "https://github.com/mtesseract/async-timer"; - description = "Provides API for timer based execution of IO actions"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "async-timer_0_1_4_1" = callPackage ({ mkDerivation, base, containers, criterion, HUnit, lifted-async , lifted-base, monad-control, safe-exceptions, test-framework , test-framework-hunit, transformers-base @@ -29234,7 +29265,6 @@ self: { homepage = "https://github.com/mtesseract/async-timer#readme"; description = "Provides API for timer based execution of IO actions"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "asynchronous-exceptions" = callPackage @@ -29628,8 +29658,8 @@ self: { }: mkDerivation { pname = "ats-format"; - version = "0.2.0.17"; - sha256 = "13bxd28pyxyna8vv3vg8d29wmyi6iv296jqbcjh0p12jicxgf4i8"; + version = "0.2.0.22"; + sha256 = "19x2pa6fb1k343b4c07xwyc879kfwya1kll0bp59paza1bqhhnnk"; isLibrary = false; isExecutable = true; enableSeparateDataOutput = true; @@ -29653,20 +29683,22 @@ self: { }: mkDerivation { pname = "ats-pkg"; - version = "2.4.2.19"; - sha256 = "0l8lrr4b99csr5wd4r9lxcax8b9jh8ij80hxsmwzs777fl295yjf"; + version = "2.6.1.3"; + sha256 = "0qxzcmbvc0s30w10whlr0lxmj5rcidma1gv03gwih7ax4bnw0ww4"; isLibrary = true; isExecutable = true; setupHaskellDepends = [ base Cabal cli-setup ]; libraryHaskellDepends = [ - ansi-wl-pprint ats-setup base binary bytestring bzlib + ansi-wl-pprint ats-setup base binary bytestring bzlib Cabal composition-prelude containers dependency dhall directory - file-embed http-client http-client-tls lens lzma - optparse-applicative parallel-io process shake shake-ats shake-ext - tar temporary text unix zip-archive zlib + file-embed http-client http-client-tls lens lzma parallel-io + process shake shake-ats shake-ext tar text unix zip-archive zlib ]; libraryToolDepends = [ cpphs ]; - executableHaskellDepends = [ base ]; + executableHaskellDepends = [ + base composition-prelude directory lens optparse-applicative shake + shake-ats temporary text + ]; homepage = "https://github.com/vmchale/atspkg#readme"; description = "A build tool for ATS"; license = stdenv.lib.licenses.bsd3; @@ -29674,31 +29706,35 @@ self: { }) {}; "ats-setup" = callPackage - ({ mkDerivation, base, bytestring, Cabal, dependency, directory - , filemanip, http-client, http-client-tls, parallel-io, process - , tar, unix, zlib + ({ mkDerivation, base, bytestring, Cabal, composition-prelude + , dependency, directory, filemanip, http-client, http-client-tls + , parallel-io, process, tar, unix, zlib }: mkDerivation { pname = "ats-setup"; - version = "0.3.0.2"; - sha256 = "1fxk1602kh4i2dgfdjalnwfp37w8r775vd21431pkwf5xcf9ax0g"; + version = "0.4.0.2"; + sha256 = "13sv7wwz6m6s9x3mr4phsf62ayyn95bdpj6cv93kyzadyi3vfvd6"; libraryHaskellDepends = [ - base bytestring Cabal dependency directory filemanip http-client - http-client-tls parallel-io process tar unix zlib + base bytestring Cabal composition-prelude dependency directory + filemanip http-client http-client-tls parallel-io process tar unix + zlib ]; description = "ATS scripts for Cabal builds"; license = stdenv.lib.licenses.bsd3; }) {}; "ats-storable" = callPackage - ({ mkDerivation, base, bytestring, composition-prelude, text }: + ({ mkDerivation, base, bytestring, composition-prelude, hspec + , microlens, microlens-th, text + }: mkDerivation { pname = "ats-storable"; - version = "0.2.1.0"; - sha256 = "1d374jkiifyn6hqr584waqhk4kirqibycs0fszf1v21dkk14jyvx"; + version = "0.3.0.1"; + sha256 = "1apzmyq9a4hjn9d0fz7pxvxflq61kp26fa6gz3c50pdjby55zhns"; libraryHaskellDepends = [ - base bytestring composition-prelude text + base bytestring composition-prelude microlens microlens-th text ]; + testHaskellDepends = [ base hspec ]; homepage = "https://github.com//ats-generic#readme"; description = "Marshal ATS types into Haskell"; license = stdenv.lib.licenses.bsd3; @@ -32404,12 +32440,12 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "basement_0_0_6" = callPackage + "basement_0_0_7" = callPackage ({ mkDerivation, base, ghc-prim }: mkDerivation { pname = "basement"; - version = "0.0.6"; - sha256 = "1xszp4nf55hr6iglqf1dx1yb9pgm3gpw81wwpjkwdn0602a3p8lw"; + version = "0.0.7"; + sha256 = "0w2g4k9bs2ph00p0fgrmcrng8ypdz6xis0r10g380nzkg2rvj0dm"; libraryHaskellDepends = [ base ghc-prim ]; homepage = "https://github.com/haskell-foundation/foundation"; description = "Foundation scrap box of array & string"; @@ -33488,6 +33524,8 @@ self: { pname = "bifunctors"; version = "5.5.2"; sha256 = "04fbsysm6zl8kmvqgffmrqa9bxl9dl2gibrd51asqzg737mb4ark"; + revision = "1"; + editedCabalFile = "0jasyhyzn0bjy5b05bvi857vsanf9kgk9rcirlw5mc7wqlxxi6mq"; libraryHaskellDepends = [ base base-orphans comonad containers semigroups tagged template-haskell th-abstraction transformers transformers-compat @@ -35295,8 +35333,8 @@ self: { }: mkDerivation { pname = "bioinformatics-toolkit"; - version = "0.3.2"; - sha256 = "1zgvn1zkajslg221fk345vfgbi9pi9lr5ki3m4qpwgr3pvlz2h10"; + version = "0.4.0"; + sha256 = "18m799psijcj81hxyrnwjvwgb9z92pw5qk5hb7yny905f0wbbar1"; enableSeparateDataOutput = true; libraryHaskellDepends = [ aeson aeson-pretty base bytestring bytestring-lexing @@ -38111,7 +38149,7 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "brick_0_34" = callPackage + "brick_0_34_1" = callPackage ({ mkDerivation, base, config-ini, containers, contravariant , data-clist, deepseq, dlist, microlens, microlens-mtl , microlens-th, stm, template-haskell, text, text-zipper @@ -38119,8 +38157,8 @@ self: { }: mkDerivation { pname = "brick"; - version = "0.34"; - sha256 = "1n835ma8a73zcb4q0r066d9ql4071qf1d30cpv2xhwqc5p4c2i41"; + version = "0.34.1"; + sha256 = "0y07xq5r5qbn5fqkp0cy1s9a50lnqmk35dvmil38xn2g23dgmfys"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -38940,8 +38978,8 @@ self: { }: mkDerivation { pname = "burnt-explorer"; - version = "0.1.1"; - sha256 = "1swv8xy06bk3wkhg788mzlpgwghyp7v3g3c22c09jji9kxwsgslv"; + version = "1.0.0"; + sha256 = "1lddgjbm62k7avxvq8mlw7z4swbjavffk05nx5nla5fll7v4q219"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -39472,8 +39510,8 @@ self: { pname = "bytestring-plain"; version = "0.1.0.2"; sha256 = "1pgxwrn8m27cc01kbbxq4rd1q15lpapii2izjlhv3ilhbfxgnbcy"; - revision = "1"; - editedCabalFile = "0cjnvc57v2g543d4si3pwcsj56pjsm84sv2hn19yrd44bzajmcna"; + revision = "2"; + editedCabalFile = "06aysffha231adrhar9jqh49m7k3wga3ascvs7a17l4vx6p16ygs"; libraryHaskellDepends = [ base bytestring deepseq ghc-prim hashable ]; @@ -40592,8 +40630,8 @@ self: { }: mkDerivation { pname = "cabal-rpm"; - version = "0.12"; - sha256 = "05k5rqwcdz6aq1jidf03dsrjd3rgisw6r2vq1gz6z49ps5sj628f"; + version = "0.12.1"; + sha256 = "0avp7prkzp522mpqnn60xmsqqp10zhp1phhlj14qzp4162772fss"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -41573,6 +41611,20 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "canon" = callPackage + ({ mkDerivation, arithmoi, array, base, containers, polynomial }: + mkDerivation { + pname = "canon"; + version = "0.1.0.4"; + sha256 = "0hy28s1rgzsqcbs600ppj74ls1xvm39fdjjba4p3f1cfw7g5ai1f"; + libraryHaskellDepends = [ + arithmoi array base containers polynomial + ]; + homepage = "https://github.com/grandpascorpion/canon"; + description = "Massive Number Arithmetic"; + license = stdenv.lib.licenses.mit; + }) {}; + "canonical-filepath" = callPackage ({ mkDerivation, base, deepseq, directory, filepath }: mkDerivation { @@ -42495,6 +42547,28 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "cassava-conduit_0_4_0_2" = callPackage + ({ mkDerivation, array, base, bifunctors, bytestring, cassava + , conduit, containers, criterion, mtl, QuickCheck, text + }: + mkDerivation { + pname = "cassava-conduit"; + version = "0.4.0.2"; + sha256 = "0kqa91m4ihs3jsp4d22q9qvsanfigawkc3i98p7zns54g0qckgiz"; + libraryHaskellDepends = [ + array base bifunctors bytestring cassava conduit containers mtl + text + ]; + testHaskellDepends = [ + base bytestring cassava conduit QuickCheck text + ]; + benchmarkHaskellDepends = [ base criterion ]; + homepage = "https://github.com/domdere/cassava-conduit"; + description = "Conduit interface for cassava package"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "cassava-embed" = callPackage ({ mkDerivation, base, bytestring, cassava, template-haskell , vector @@ -42824,27 +42898,6 @@ self: { }) {}; "cayley-client" = callPackage - ({ mkDerivation, aeson, attoparsec, base, binary, bytestring - , exceptions, hspec, http-client, http-conduit, lens, lens-aeson - , mtl, text, transformers, unordered-containers, vector - }: - mkDerivation { - pname = "cayley-client"; - version = "0.4.2"; - sha256 = "1pzsr7jcqsi27mnxgq4y5np4ysig29cmk27iqp0m73xj5fiss6z8"; - libraryHaskellDepends = [ - aeson attoparsec base binary bytestring exceptions http-client - http-conduit lens lens-aeson mtl text transformers - unordered-containers vector - ]; - testHaskellDepends = [ aeson base hspec unordered-containers ]; - homepage = "https://github.com/MichelBoucey/cayley-client"; - description = "A Haskell client for the Cayley graph database"; - license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; - }) {}; - - "cayley-client_0_4_3" = callPackage ({ mkDerivation, aeson, attoparsec, base, binary, bytestring , exceptions, hspec, http-client, http-conduit, lens, lens-aeson , mtl, text, transformers, unordered-containers, vector @@ -43554,23 +43607,24 @@ self: { }) {}; "cgrep" = callPackage - ({ mkDerivation, ansi-terminal, array, async, base, bytestring - , cmdargs, containers, directory, dlist, either, filepath, ghc-prim - , mtl, process, regex-base, regex-pcre, regex-posix, safe, split - , stm, stringsearch, transformers, unicode-show, unix-compat - , unordered-containers, utf8-string + ({ mkDerivation, aeson, ansi-terminal, array, async, base + , bytestring, cmdargs, containers, directory, dlist, either + , filepath, ghc-prim, mtl, process, regex-base, regex-pcre + , regex-posix, safe, split, stm, stringsearch, transformers + , unicode-show, unix-compat, unordered-containers, utf8-string + , yaml }: mkDerivation { pname = "cgrep"; - version = "6.6.22"; - sha256 = "0nh8smbhwkqygxdv61yd82n26q6d4sdh4zzixcq5pczzacfzp8j9"; + version = "6.6.24"; + sha256 = "0clnnhr5srrl3z2crfrs7csihrgcq5p9d9vgqbgxsf741jnfmhcx"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ - ansi-terminal array async base bytestring cmdargs containers + aeson ansi-terminal array async base bytestring cmdargs containers directory dlist either filepath ghc-prim mtl process regex-base regex-pcre regex-posix safe split stm stringsearch transformers - unicode-show unix-compat unordered-containers utf8-string + unicode-show unix-compat unordered-containers utf8-string yaml ]; homepage = "http://awgn.github.io/cgrep/"; description = "Command line tool"; @@ -43793,7 +43847,7 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; - "chart-unit_0_6_0_2" = callPackage + "chart-unit_0_6_1_0" = callPackage ({ mkDerivation, base, colour, data-default, diagrams-lib , diagrams-svg, doctest, foldl, formatting, generic-lens , generic-lens-labels, lens, linear, mwc-probability, mwc-random @@ -43803,8 +43857,8 @@ self: { }: mkDerivation { pname = "chart-unit"; - version = "0.6.0.2"; - sha256 = "1xdnjdhm20nfp6gypz01rj7i0dz9f3ds5sdacynsmvvj3gi2zimr"; + version = "0.6.1.0"; + sha256 = "07aiw8n7b23k9n1g4inpmdbkmmahl7vdvqr575rc7n0bnwwfyvi0"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -46002,6 +46056,17 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "clexer" = callPackage + ({ mkDerivation, base, containers, mtl, parsec }: + mkDerivation { + pname = "clexer"; + version = "0.1.0.0"; + sha256 = "1x2q496jqvgqjbwncszl1h9ylkq6rn8h2fsp7w771xkyslfq46xy"; + libraryHaskellDepends = [ base containers mtl parsec ]; + description = "Lexes C++ code into simple tokens"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "cli" = callPackage ({ mkDerivation, base, directory, mtl, QuickCheck, tasty , tasty-quickcheck, terminfo, transformers @@ -47284,8 +47349,8 @@ self: { }: mkDerivation { pname = "codeworld-api"; - version = "0.2.2.0"; - sha256 = "14q4aqmp2q4jf1w1j071lypysj3b6fxd7k8n4hwi81c8g6n67r81"; + version = "0.2.2.1"; + sha256 = "0vb3v8d4jdzk14zs1jv4m5f2wa32bpxsfa0zr4f3w6z77as136sx"; libraryHaskellDepends = [ base blank-canvas cereal cereal-text containers hashable mtl random random-shuffle text time @@ -48130,25 +48195,6 @@ self: { }) {}; "comfort-graph" = callPackage - ({ mkDerivation, base, containers, QuickCheck, transformers - , utility-ht - }: - mkDerivation { - pname = "comfort-graph"; - version = "0.0.2.1"; - sha256 = "02brkbrvs6q7nss3mpqcqwgz3nmim2xz30nvbkxqy7zdxci6kign"; - libraryHaskellDepends = [ - base containers QuickCheck transformers utility-ht - ]; - testHaskellDepends = [ - base containers QuickCheck transformers utility-ht - ]; - homepage = "http://hub.darcs.net/thielema/comfort-graph"; - description = "Graph structure with type parameters for nodes and edges"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "comfort-graph_0_0_3" = callPackage ({ mkDerivation, base, containers, QuickCheck, semigroups , transformers, utility-ht }: @@ -48165,7 +48211,6 @@ self: { homepage = "http://hub.darcs.net/thielema/comfort-graph"; description = "Graph structure with type parameters for nodes and edges"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "comic" = callPackage @@ -48911,8 +48956,8 @@ self: { ({ mkDerivation, base }: mkDerivation { pname = "composition-prelude"; - version = "1.2.0.1"; - sha256 = "1rb7hy5xfmpv8hr4ik49883ph027g9kskfc77yzwrx29q3jmq3gj"; + version = "1.3.0.3"; + sha256 = "050w2h7all9r9rd68xq2d8cxg78ca8xh5b2ys17apla3amm9a7xi"; libraryHaskellDepends = [ base ]; homepage = "https://github.com/vmchale/composition-prelude#readme"; description = "Higher-order function combinators"; @@ -49731,34 +49776,6 @@ self: { }) {}; "conduit-algorithms" = callPackage - ({ mkDerivation, async, base, bytestring, bzlib-conduit, conduit - , conduit-combinators, conduit-extra, containers, deepseq - , directory, HUnit, lzma-conduit, mtl, resourcet, stm, stm-conduit - , test-framework, test-framework-hunit, test-framework-th - , transformers, vector - }: - mkDerivation { - pname = "conduit-algorithms"; - version = "0.0.7.1"; - sha256 = "153g4lhd8ah97hbdvjxc1j4cnkdmpy6x2pbdjv2n7wyn80mqh9i7"; - libraryHaskellDepends = [ - async base bytestring bzlib-conduit conduit conduit-combinators - conduit-extra containers deepseq lzma-conduit mtl resourcet stm - stm-conduit transformers vector - ]; - testHaskellDepends = [ - async base bytestring bzlib-conduit conduit conduit-combinators - conduit-extra containers deepseq directory HUnit lzma-conduit mtl - resourcet stm stm-conduit test-framework test-framework-hunit - test-framework-th transformers vector - ]; - homepage = "https://github.com/luispedro/conduit-algorithms#readme"; - description = "Conduit-based algorithms"; - license = stdenv.lib.licenses.mit; - hydraPlatforms = stdenv.lib.platforms.none; - }) {}; - - "conduit-algorithms_0_0_7_2" = callPackage ({ mkDerivation, async, base, bytestring, bzlib-conduit, conduit , conduit-combinators, conduit-extra, containers, deepseq , directory, HUnit, lzma-conduit, mtl, resourcet, stm, stm-conduit @@ -50607,6 +50624,25 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "connection-string" = callPackage + ({ mkDerivation, base, containers, doctest, megaparsec + , parser-combinators, text + }: + mkDerivation { + pname = "connection-string"; + version = "0.1.0.0"; + sha256 = "0hkszhms7n6vp9w8agik0qndz2a3f8l56yxidw9l9mjn3sx769g2"; + revision = "1"; + editedCabalFile = "0zirgds0ha3245cagx3fhssz58bpyzci7zv4mw9rfnc1k48v69b2"; + libraryHaskellDepends = [ + base containers megaparsec parser-combinators + ]; + testHaskellDepends = [ base doctest text ]; + homepage = "https://github.com/Porges/connection-string-hs"; + description = "A library for parsing connection strings"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "consistent" = callPackage ({ mkDerivation, base, lifted-async, lifted-base, monad-control , stm, transformers, transformers-base, unordered-containers @@ -50685,8 +50721,8 @@ self: { ({ mkDerivation, base, tagged, void }: mkDerivation { pname = "constrained-categories"; - version = "0.3.0.1"; - sha256 = "0zga3841195dv0aw9x91ww9fl8y61chxicg3i4g6797dy0cv2752"; + version = "0.3.1.0"; + sha256 = "0xxmbvzxa2phwn25haxbr6gv0cnh92c1i2l5anhckqizx29gl668"; libraryHaskellDepends = [ base tagged void ]; homepage = "https://github.com/leftaroundabout/constrained-categories"; description = "Constrained clones of the category-theory type classes, using ConstraintKinds"; @@ -51226,6 +51262,21 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "control-iso" = callPackage + ({ mkDerivation, base, bytestring, newtype-generics, profunctors + , text + }: + mkDerivation { + pname = "control-iso"; + version = "0.1.0.0"; + sha256 = "1z4z3plxs06w485injj2azk8bl42wy0i6c65c4j7fzkkyk7pqbfj"; + libraryHaskellDepends = [ + base bytestring newtype-generics profunctors text + ]; + description = "A typeclass for type isomorphisms"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "control-monad-attempt" = callPackage ({ mkDerivation, attempt, base, transformers }: mkDerivation { @@ -52848,8 +52899,8 @@ self: { }: mkDerivation { pname = "crdt"; - version = "9.1"; - sha256 = "1rhwbwhaxx15jpy9jacdxcrqfxh8nm84w5jadsrb947nhjjwczj6"; + version = "9.3"; + sha256 = "1w1mb43hb6zn8n8r261j623jrgxx54h8jifhcby8nnfyl3h97c69"; libraryHaskellDepends = [ base binary bytestring containers Diff hashable mtl network-info safe stm time vector @@ -53074,6 +53125,8 @@ self: { pname = "criterion"; version = "1.2.6.0"; sha256 = "0a9pjmy74cd3yirihyabavsfa6b9rrrgav86qdagw5nwjw7as1bc"; + revision = "1"; + editedCabalFile = "094z5gbgnsbfwwn5qsila3bfg0dqg63zq6rmhsf973dca00b8syz"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -53107,6 +53160,8 @@ self: { pname = "criterion"; version = "1.3.0.0"; sha256 = "0csgk6njr6a3i895d10pajf7z4r9hx8aj2r0c3rj5li6vrm37f8q"; + revision = "1"; + editedCabalFile = "1yfv8c3azrdba8nsw9za3flklryn7490hgcjqxjal3m9xbh7g1pn"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -53755,16 +53810,16 @@ self: { }: mkDerivation { pname = "cryptoconditions"; - version = "0.1.0.0"; - sha256 = "0dbhlv7nh0awnvi1rwg3s25ksbxgvdlci543bwqp5ilkqdl3vlh0"; + version = "0.2.3.0"; + sha256 = "1gwq1527n6xf19xzcqzhgg6cl85albq3sgp25dxm3pvi45dvinas"; libraryHaskellDepends = [ - asn1-encoding asn1-parse asn1-types base base64-bytestring + aeson asn1-encoding asn1-parse asn1-types base base64-bytestring bytestring containers cryptonite memory text ]; testHaskellDepends = [ aeson aeson-quick asn1-encoding base base16-bytestring - base64-bytestring bytestring cryptonite tasty tasty-hunit text - transformers + base64-bytestring bytestring containers cryptonite tasty + tasty-hunit text transformers ]; homepage = "https://github.com/libscott/cryptoconditions-hs"; description = "Interledger Crypto-Conditions"; @@ -53922,6 +53977,8 @@ self: { pname = "cryptoids"; version = "0.5.0.0"; sha256 = "05xywzs7waz01c0p3y02qlf4yfhfpmpzpdfs2cmv5rmphf1hzck2"; + revision = "3"; + editedCabalFile = "0px43xzijabkf727gfza6nm3p8v8higa9nl71vvadvyp7jm4hbnl"; libraryHaskellDepends = [ base binary bytestring cryptoids-class cryptoids-types cryptonite directory exceptions filepath memory @@ -53936,6 +53993,8 @@ self: { pname = "cryptoids-class"; version = "0.0.0"; sha256 = "0zp0d815r0dv2xqdi6drq846zz2a82gpqp6nvap3b5dnx2q3hbjy"; + revision = "2"; + editedCabalFile = "1y2qav6izihivhxzv8fn4d7vrp0cvbfv84k8l4x6av6iwfbak5s8"; libraryHaskellDepends = [ base cryptoids-types exceptions ]; description = "Typeclass-based interface to cryptoids"; license = stdenv.lib.licenses.bsd3; @@ -53947,6 +54006,8 @@ self: { pname = "cryptoids-types"; version = "0.0.0"; sha256 = "0qp6lx1k2mqay1i4wgkwgaqamp33gijw0wb13rh71i0qwyvnr51b"; + revision = "1"; + editedCabalFile = "0i12f6rsphs4plkxc8w3dalyf9iy5q67lkm4fxv4g1zcicqxgmqy"; libraryHaskellDepends = [ base binary http-api-data path-pieces ]; description = "Shared types for encrypting internal object identifiers before exposure"; license = stdenv.lib.licenses.bsd3; @@ -54401,20 +54462,23 @@ self: { }) {}; "csv-to-qif" = callPackage - ({ mkDerivation, base, Cabal, explicit-exception, hspec, regex-tdfa - , split, spreadsheet + ({ mkDerivation, base, Cabal, explicit-exception, hspec, parsec + , QuickCheck, regex-tdfa, split, spreadsheet }: mkDerivation { pname = "csv-to-qif"; - version = "0.3.2"; - sha256 = "1mfy19fvi92zzzqn70ga2p5csmc8qm0qnkn3vyl41ic6f69vm73x"; + version = "0.3.3"; + sha256 = "0ln7s3k1m802x00sr0py3l3zsww2wnv2lcb2fb71966pwqrbr4fp"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ - base explicit-exception regex-tdfa split spreadsheet + base explicit-exception parsec regex-tdfa split spreadsheet ]; - testHaskellDepends = [ base Cabal hspec regex-tdfa split ]; - homepage = "https://github.com/mrVanDalo/csv-to-qif/"; + testHaskellDepends = [ + base Cabal explicit-exception hspec parsec QuickCheck regex-tdfa + split spreadsheet + ]; + homepage = "http://mrvandalo.github.io/csv-to-qif/"; description = "A small program that will read csv files and create qif files"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; @@ -54584,27 +54648,6 @@ self: { }) {}; "cuda" = callPackage - ({ mkDerivation, base, bytestring, c2hs, Cabal, directory, filepath - , pretty, template-haskell - }: - mkDerivation { - pname = "cuda"; - version = "0.9.0.0"; - sha256 = "0zbichiribg9549fipsvq60abzz3j4i9ilf92j34avarby15q6ld"; - isLibrary = true; - isExecutable = true; - setupHaskellDepends = [ base Cabal directory filepath ]; - libraryHaskellDepends = [ - base bytestring filepath template-haskell - ]; - libraryToolDepends = [ c2hs ]; - executableHaskellDepends = [ base pretty ]; - homepage = "https://github.com/tmcdonell/cuda"; - description = "FFI binding to the CUDA interface for programming NVIDIA GPUs"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "cuda_0_9_0_1" = callPackage ({ mkDerivation, base, bytestring, c2hs, Cabal, directory, filepath , pretty, template-haskell }: @@ -54623,7 +54666,6 @@ self: { homepage = "https://github.com/tmcdonell/cuda"; description = "FFI binding to the CUDA interface for programming NVIDIA GPUs"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "cudd" = callPackage @@ -57185,6 +57227,33 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "data-stm32" = callPackage + ({ mkDerivation, ansi-wl-pprint, attoparsec, base, containers, hxt + , hxt-xpath, pretty-simple, text, time + }: + mkDerivation { + pname = "data-stm32"; + version = "0.1.0.0"; + sha256 = "104m1lnm9kf64m3a0svahsvscmcmnb0ixvwm1vh32r61r1rc9fh1"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + ansi-wl-pprint attoparsec base containers hxt hxt-xpath + pretty-simple text time + ]; + executableHaskellDepends = [ + ansi-wl-pprint attoparsec base containers hxt hxt-xpath + pretty-simple text time + ]; + testHaskellDepends = [ + ansi-wl-pprint attoparsec base containers hxt hxt-xpath + pretty-simple text time + ]; + homepage = "https://github.com/sorki/data-stm32#readme"; + description = "ARM SVD and CubeMX XML parser and pretty printer for STM32 family"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "data-store" = callPackage ({ mkDerivation, base, bytestring, cereal, containers, criterion , deepseq, ixset, lens, mtl, QuickCheck, random, safecopy, tables @@ -58365,6 +58434,22 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "dde" = callPackage + ({ mkDerivation, base, vector }: + mkDerivation { + pname = "dde"; + version = "0.0.1"; + sha256 = "1mv3i56l3al386g6jr1dpkjx0mwpq25maqkw7zv8qdnshkg1x33f"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ base vector ]; + executableHaskellDepends = [ base vector ]; + testHaskellDepends = [ base vector ]; + homepage = "https://github.com/masterdezign/dde#readme"; + description = "Delay differential equations"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "dead-code-detection" = callPackage ({ mkDerivation, base, containers, directory, filepath , getopt-generics, ghc, ghc-paths, gitrev, Glob, graph-wrapper @@ -59058,14 +59143,14 @@ self: { license = stdenv.lib.licenses.mit; }) {}; - "dejafu_1_0_0_2" = callPackage + "dejafu_1_1_0_0" = callPackage ({ mkDerivation, base, concurrency, containers, deepseq, exceptions , leancheck, profunctors, random, ref-fd, transformers }: mkDerivation { pname = "dejafu"; - version = "1.0.0.2"; - sha256 = "0j98kvqi746swpw6jsg8vfjw16y7d0nmiysxfsl7yrnqzma9nyx6"; + version = "1.1.0.0"; + sha256 = "1zrr7h84lgqm1lzl3cm2clvhrixpv2ywrjgbwbmrlfwr054v3mnm"; libraryHaskellDepends = [ base concurrency containers deepseq exceptions leancheck profunctors random ref-fd transformers @@ -59657,6 +59742,8 @@ self: { pname = "deriving-compat"; version = "0.4.1"; sha256 = "0lzcbnvzcnrrvr61mrqdx4i8fylknf4jwrpncxr9lhpxgp4fqqk4"; + revision = "1"; + editedCabalFile = "12pzj7ng66xyyj6aixd0mds8vf0p9syivngrjz9xcsi63d76dsbn"; libraryHaskellDepends = [ base containers ghc-boot-th ghc-prim template-haskell th-abstraction transformers transformers-compat @@ -59944,32 +60031,38 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "dhall_1_9_1" = callPackage - ({ mkDerivation, ansi-wl-pprint, base, base16-bytestring - , bytestring, case-insensitive, charset, containers, contravariant - , cryptohash, deepseq, exceptions, http-client, http-client-tls - , lens-family-core, optparse-generic, parsers, prettyprinter - , system-fileio, system-filepath, tasty, tasty-hunit, text - , text-format, transformers, trifecta, unordered-containers, vector + "dhall_1_10_0" = callPackage + ({ mkDerivation, ansi-terminal, ansi-wl-pprint, base + , base16-bytestring, bytestring, case-insensitive, containers + , contravariant, cryptohash, deepseq, directory, exceptions + , filepath, haskeline, http-client, http-client-tls + , insert-ordered-containers, lens-family-core, mtl + , optparse-generic, parsers, prettyprinter + , prettyprinter-ansi-terminal, repline, scientific, tasty + , tasty-hunit, text, text-format, transformers, trifecta + , unordered-containers, vector }: mkDerivation { pname = "dhall"; - version = "1.9.1"; - sha256 = "1kwv5mhcabg3bwnp9j7z01xxv1a0xnpc6n0yw02k8xhrhdz60hdq"; + version = "1.10.0"; + sha256 = "1z9z9f0qw0p7nywpgamkgfz3h3ikhkshrphsviz94vwhnrflq1wf"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ ansi-wl-pprint base base16-bytestring bytestring case-insensitive - charset containers contravariant cryptohash exceptions http-client - http-client-tls lens-family-core parsers prettyprinter - system-fileio system-filepath text text-format transformers - trifecta unordered-containers vector + containers contravariant cryptohash directory exceptions filepath + http-client http-client-tls insert-ordered-containers + lens-family-core parsers prettyprinter prettyprinter-ansi-terminal + scientific text text-format transformers trifecta + unordered-containers vector ]; executableHaskellDepends = [ - base optparse-generic prettyprinter system-filepath text trifecta + ansi-terminal base haskeline mtl optparse-generic prettyprinter + prettyprinter-ansi-terminal repline text trifecta ]; testHaskellDepends = [ - base containers deepseq prettyprinter tasty tasty-hunit text vector + base deepseq insert-ordered-containers prettyprinter tasty + tasty-hunit text vector ]; description = "A configuration language guaranteed to terminate"; license = stdenv.lib.licenses.bsd3; @@ -59998,20 +60091,20 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "dhall-bash_1_0_7" = callPackage + "dhall-bash_1_0_9" = callPackage ({ mkDerivation, base, bytestring, containers, dhall - , neat-interpolation, optparse-generic, shell-escape, text - , text-format, trifecta, vector + , insert-ordered-containers, neat-interpolation, optparse-generic + , shell-escape, text, text-format, trifecta, vector }: mkDerivation { pname = "dhall-bash"; - version = "1.0.7"; - sha256 = "1mwxzrr5dmlm1892a4akgs52jl0bwiyf2qpl2mnr91y7fnmn00qs"; + version = "1.0.9"; + sha256 = "1knnljzh7gccma1xbj3ahrj6cyqfp7lisiv51nnwpxizb7vdfnx0"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - base bytestring containers dhall neat-interpolation shell-escape - text text-format vector + base bytestring containers dhall insert-ordered-containers + neat-interpolation shell-escape text text-format vector ]; executableHaskellDepends = [ base bytestring dhall optparse-generic text trifecta @@ -60059,14 +60152,14 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "dhall-json_1_0_10" = callPackage + "dhall-json_1_0_11" = callPackage ({ mkDerivation, aeson, aeson-pretty, base, bytestring, dhall , optparse-generic, text, trifecta, vector, yaml }: mkDerivation { pname = "dhall-json"; - version = "1.0.10"; - sha256 = "0zqb5hh3520l75walfnyr1i9dqphjxcawchvm12shjz2vqpi6wpq"; + version = "1.0.11"; + sha256 = "14jkf3j9iwnhkyz4wl6lvvci8ad21s20rk9kr7hr3fcmzv39alwf"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ aeson base dhall text vector ]; @@ -60101,20 +60194,20 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "dhall-nix_1_0_10" = callPackage + "dhall-nix_1_1_0" = callPackage ({ mkDerivation, base, containers, data-fix, dhall, hnix - , neat-interpolation, optparse-generic, text, text-format, trifecta - , vector + , insert-ordered-containers, neat-interpolation, optparse-generic + , scientific, text, text-format, trifecta, vector }: mkDerivation { pname = "dhall-nix"; - version = "1.0.10"; - sha256 = "09iy1a0nc2mwbsly58na9lw4jh7wv7zq0lspdcynhsxj3xv2q23n"; + version = "1.1.0"; + sha256 = "0g2wyr79krbfdv1z6c8w78kz3w1y0jbx8778qgxbjp70inkwq5gl"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - base containers data-fix dhall hnix neat-interpolation text - text-format vector + base containers data-fix dhall hnix insert-ordered-containers + neat-interpolation scientific text text-format vector ]; executableHaskellDepends = [ base dhall hnix optparse-generic text trifecta @@ -60137,6 +60230,20 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "dhall-text_1_0_6" = callPackage + ({ mkDerivation, base, dhall, optparse-generic, text }: + mkDerivation { + pname = "dhall-text"; + version = "1.0.6"; + sha256 = "0r08x1s75qsfmn6gnfm0ikh80cq3dbgj7bp4jb8f5pz7p2azh72v"; + isLibrary = false; + isExecutable = true; + executableHaskellDepends = [ base dhall optparse-generic text ]; + description = "Template text using Dhall"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "dhcp-lease-parser" = callPackage ({ mkDerivation, attoparsec, base, bytestring, chronos, ip, tasty , tasty-hunit, text @@ -62399,8 +62506,8 @@ self: { }: mkDerivation { pname = "distributed-process-lifted"; - version = "0.3.0.0"; - sha256 = "1n0jic03x959rnkaavcywhz0zbqhaya53y0ydh13qs83a1y13m7i"; + version = "0.3.0.1"; + sha256 = "1074f1wblsmx89hkblds3npf2ha3p8ighdq0kjywb5522addbxrk"; libraryHaskellDepends = [ base deepseq distributed-process distributed-process-monad-control lifted-base monad-control mtl network-transport transformers @@ -63240,7 +63347,7 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "docker_0_5_0_1" = callPackage + "docker_0_5_1_0" = callPackage ({ mkDerivation, aeson, base, blaze-builder, bytestring, conduit , conduit-combinators, conduit-extra, connection, containers , data-default-class, directory, exceptions, filemanip, filepath @@ -63248,22 +63355,20 @@ self: { , lens-aeson, monad-control, mtl, network, process, QuickCheck , resourcet, scientific, tar, tasty, tasty-hunit, tasty-quickcheck , temporary, text, time, tls, transformers, transformers-base - , unordered-containers, uuid, vector, x509, x509-store, x509-system - , zlib + , unliftio-core, unordered-containers, uuid, vector, x509 + , x509-store, x509-system, zlib }: mkDerivation { pname = "docker"; - version = "0.5.0.1"; - sha256 = "0357d9hnrr990ysp87c17a8brnkp1w2w666m5jxhkap53n2dji4v"; - revision = "1"; - editedCabalFile = "1rrhgk3g33ppzxp3yqwdsj7l9nrmxl2xssb97slm7l81vypvs5z5"; + version = "0.5.1.0"; + sha256 = "1g1bmz185hibm0n23yxkili4v8768yascd8mc8z2pil9bky7lvww"; libraryHaskellDepends = [ aeson base blaze-builder bytestring conduit conduit-combinators conduit-extra containers data-default-class directory exceptions filemanip filepath http-client http-conduit http-types monad-control mtl network resourcet scientific tar temporary text - time tls transformers transformers-base unordered-containers uuid - vector x509 x509-store x509-system zlib + time tls transformers transformers-base unliftio-core + unordered-containers uuid vector x509 x509-store x509-system zlib ]; testHaskellDepends = [ aeson base bytestring connection containers directory http-client @@ -63442,7 +63547,7 @@ self: { license = stdenv.lib.licenses.mit; }) {}; - "doctest_0_14_0" = callPackage + "doctest_0_14_1" = callPackage ({ mkDerivation, base, base-compat, code-page, deepseq, directory , filepath, ghc, ghc-paths, hspec, HUnit, mockery, process , QuickCheck, setenv, silently, stringbuilder, syb, transformers @@ -63450,8 +63555,8 @@ self: { }: mkDerivation { pname = "doctest"; - version = "0.14.0"; - sha256 = "18qia153653fib1jdrdyvxa3wjcfhdn371r97mwv03q915i4bm3g"; + version = "0.14.1"; + sha256 = "1phnrsh2gjls54mlpqhfjs0x003jbrsz1sijy107mbg2gnck9cfj"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -63474,29 +63579,6 @@ self: { }) {}; "doctest-discover" = callPackage - ({ mkDerivation, aeson, base, bytestring, directory, doctest - , filepath - }: - mkDerivation { - pname = "doctest-discover"; - version = "0.1.0.7"; - sha256 = "0w5xgw841fxp26n4c9srp84g0m0b105sa1snwrjg5dvxa7d6asmc"; - isLibrary = true; - isExecutable = true; - libraryHaskellDepends = [ - aeson base bytestring directory doctest filepath - ]; - executableHaskellDepends = [ - aeson base bytestring directory doctest filepath - ]; - testHaskellDepends = [ base doctest ]; - doHaddock = false; - homepage = "http://github.com/karun012/doctest-discover"; - description = "Easy way to run doctests via cabal"; - license = stdenv.lib.licenses.publicDomain; - }) {}; - - "doctest-discover_0_1_0_8" = callPackage ({ mkDerivation, aeson, base, bytestring, directory, doctest , filepath }: @@ -63517,7 +63599,6 @@ self: { homepage = "http://github.com/karun012/doctest-discover"; description = "Easy way to run doctests via cabal"; license = stdenv.lib.licenses.publicDomain; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "doctest-discover-configurator" = callPackage @@ -67276,8 +67357,8 @@ self: { }: mkDerivation { pname = "email-validate"; - version = "2.3.2.1"; - sha256 = "0qvxysiap3r4mi3xff5nsk9qv6diqxfgwj186bypbamzvzlz0lav"; + version = "2.3.2.2"; + sha256 = "1nwa97cnf04mapk6r5fr3bjzjb5gyfn0nmhz4a2x0p2ci01hrida"; libraryHaskellDepends = [ attoparsec base bytestring template-haskell ]; @@ -67941,17 +68022,6 @@ self: { }) {}; "enumset" = callPackage - ({ mkDerivation, base, data-accessor, storable-record }: - mkDerivation { - pname = "enumset"; - version = "0.0.4"; - sha256 = "1dzwxi7i757zdf68v470n8dwn1g8kg51w3c1mwqyxwq85650805w"; - libraryHaskellDepends = [ base data-accessor storable-record ]; - description = "Sets of enumeration values represented by machine words"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "enumset_0_0_4_1" = callPackage ({ mkDerivation, base, data-accessor, semigroups, storable-record }: mkDerivation { @@ -67963,7 +68033,6 @@ self: { ]; description = "Sets of enumeration values represented by machine words"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "env-locale" = callPackage @@ -68545,6 +68614,23 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "errors_2_2_3" = callPackage + ({ mkDerivation, base, exceptions, safe, text, transformers + , transformers-compat, unexceptionalio + }: + mkDerivation { + pname = "errors"; + version = "2.2.3"; + sha256 = "1r33q7nfikm7pzgaag3zx5am60445vwh446wc1zmj1l5miwz3scw"; + libraryHaskellDepends = [ + base exceptions safe text transformers transformers-compat + unexceptionalio + ]; + description = "Simplified error-handling"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "errors-ext" = callPackage ({ mkDerivation, base, errors, exceptions, HUnit, monad-control , mtl, transformers @@ -69228,25 +69314,6 @@ self: { }) {}; "event-list" = callPackage - ({ mkDerivation, base, non-negative, QuickCheck, random - , transformers, utility-ht - }: - mkDerivation { - pname = "event-list"; - version = "0.1.1.3"; - sha256 = "05l4bsq3pglyf81dq26djz9xsjsabxwq5k6z3wi43d7a774510pm"; - libraryHaskellDepends = [ - base non-negative QuickCheck transformers utility-ht - ]; - testHaskellDepends = [ - base non-negative QuickCheck random transformers utility-ht - ]; - homepage = "http://code.haskell.org/~thielema/event-list/"; - description = "Event lists with relative or absolute time stamps"; - license = "GPL"; - }) {}; - - "event-list_0_1_2" = callPackage ({ mkDerivation, base, non-negative, QuickCheck, random, semigroups , transformers, utility-ht }: @@ -69264,7 +69331,6 @@ self: { homepage = "http://code.haskell.org/~thielema/event-list/"; description = "Event lists with relative or absolute time stamps"; license = "GPL"; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "event-monad" = callPackage @@ -69967,8 +70033,8 @@ self: { pname = "exceptions"; version = "0.8.3"; sha256 = "1gl7xzffsqmigam6zg0jsglncgzxqafld2p6kb7ccp9xirzdjsjd"; - revision = "4"; - editedCabalFile = "18iip6wffnrp1jgnf09gxg4v17ymjank50kjshxvcy9s9l9g13ln"; + revision = "5"; + editedCabalFile = "1kfgp41i6mfz9gjczp3flvqxfhnznd81rwldv8j05807n6mnqqii"; libraryHaskellDepends = [ base mtl stm template-haskell transformers transformers-compat ]; @@ -69981,6 +70047,29 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "exceptions_0_9_0" = callPackage + ({ mkDerivation, base, mtl, QuickCheck, stm, template-haskell + , test-framework, test-framework-hunit, test-framework-quickcheck2 + , transformers, transformers-compat + }: + mkDerivation { + pname = "exceptions"; + version = "0.9.0"; + sha256 = "1k66qq82srx62hmfqis5x7p2cjyq218rg9xks2sl960x5p4jvl8g"; + libraryHaskellDepends = [ + base mtl stm template-haskell transformers transformers-compat + ]; + testHaskellDepends = [ + base mtl QuickCheck stm template-haskell test-framework + test-framework-hunit test-framework-quickcheck2 transformers + transformers-compat + ]; + homepage = "http://github.com/ekmett/exceptions/"; + description = "Extensible optionally-pure exceptions"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "execs" = callPackage ({ mkDerivation, base, directory, process, text }: mkDerivation { @@ -70426,20 +70515,6 @@ self: { }) {}; "explicit-exception" = callPackage - ({ mkDerivation, base, deepseq, transformers }: - mkDerivation { - pname = "explicit-exception"; - version = "0.1.9"; - sha256 = "1kxx42kzm3r0mji7756yblpr7ys3lhx937jixgm8q1zsyg36m2hz"; - isLibrary = true; - isExecutable = true; - libraryHaskellDepends = [ base deepseq transformers ]; - homepage = "http://www.haskell.org/haskellwiki/Exception"; - description = "Exceptions which are explicit in the type signature"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "explicit-exception_0_1_9_2" = callPackage ({ mkDerivation, base, deepseq, semigroups, transformers }: mkDerivation { pname = "explicit-exception"; @@ -70451,7 +70526,6 @@ self: { homepage = "http://www.haskell.org/haskellwiki/Exception"; description = "Exceptions which are explicit in the type signature"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "explicit-iomodes" = callPackage @@ -70786,8 +70860,8 @@ self: { }: mkDerivation { pname = "extra"; - version = "1.6.3"; - sha256 = "06ds0jlx6sljwdf63l154qbzia9mnsri79i9qm3xikky3nj9ia1m"; + version = "1.6.4"; + sha256 = "02i4wjp9wgnp2f89d7fj3jnc2pkkcnw068qh85sim3pfabz0a9hw"; libraryHaskellDepends = [ base clock directory filepath process time unix ]; @@ -71202,22 +71276,24 @@ self: { }) {}; "fast-arithmetic" = callPackage - ({ mkDerivation, arithmoi, ats-setup, base, Cabal, combinat - , composition-prelude, criterion, gmpint, hspec, QuickCheck + ({ mkDerivation, arithmoi, ats-pkg, base, Cabal, combinat + , composition-prelude, criterion, gmpint, hspec, numbertheory + , QuickCheck }: mkDerivation { pname = "fast-arithmetic"; - version = "0.3.2.5"; - sha256 = "0sln2am6xrm73y3731gy1wabc8cdvnrksgzvrl0qwlinshc4pd74"; - setupHaskellDepends = [ ats-setup base Cabal ]; + version = "0.3.3.1"; + sha256 = "1xbhg1qvd8zilmcc58dci4kk5l44wd0shdz11ssacf0pg2hpqc3n"; + setupHaskellDepends = [ ats-pkg base Cabal ]; libraryHaskellDepends = [ base composition-prelude gmpint ]; + librarySystemDepends = [ numbertheory ]; testHaskellDepends = [ arithmoi base combinat hspec QuickCheck ]; benchmarkHaskellDepends = [ arithmoi base combinat criterion ]; homepage = "https://github.com/vmchale/fast-arithmetic#readme"; description = "Fast functions on integers"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; - }) {}; + }) {numbertheory = null;}; "fast-builder" = callPackage ({ mkDerivation, aeson, base, bytestring, containers, criterion @@ -71863,26 +71939,6 @@ self: { }) {}; "fclabels" = callPackage - ({ mkDerivation, base, criterion, HUnit, mtl, template-haskell - , transformers - }: - mkDerivation { - pname = "fclabels"; - version = "2.0.3.2"; - sha256 = "1c42f420bih3azhis9hhcdk6ijm10wp9rqa2kh763g68qgzq6pad"; - revision = "3"; - editedCabalFile = "19gd2jwjpfrmq80gpjk05djhn42vvj88fgka5yr7yaq6mfx103by"; - libraryHaskellDepends = [ base mtl template-haskell transformers ]; - testHaskellDepends = [ - base HUnit mtl template-haskell transformers - ]; - benchmarkHaskellDepends = [ base criterion ]; - homepage = "https://github.com/sebastiaanvisser/fclabels"; - description = "First class accessor labels implemented as lenses"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "fclabels_2_0_3_3" = callPackage ({ mkDerivation, base, criterion, HUnit, mtl, template-haskell , transformers }: @@ -71898,7 +71954,6 @@ self: { homepage = "https://github.com/sebastiaanvisser/fclabels"; description = "First class accessor labels implemented as lenses"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "fclabels-monadlib" = callPackage @@ -72999,6 +73054,8 @@ self: { pname = "filepath-crypto"; version = "0.1.0.0"; sha256 = "1bj9haa4ignmk6c6gdiqb4rnwy395pwqdyfy4kgg0z16w0l39mw0"; + revision = "2"; + editedCabalFile = "00wjrwssdz98v2hafq271132bs766npgycqd5v2b5k0cd3mdk9lv"; libraryHaskellDepends = [ base binary bytestring case-insensitive cryptoids cryptoids-class cryptoids-types exceptions filepath sandi template-haskell @@ -74264,6 +74321,20 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "flip-cmd" = callPackage + ({ mkDerivation, base, process, safe-exceptions }: + mkDerivation { + pname = "flip-cmd"; + version = "0.1.0.0"; + sha256 = "1pl31lfsfsc1qlnkrvif3j9imz6pac325bgys7x7365xy46zkad6"; + isLibrary = false; + isExecutable = true; + executableHaskellDepends = [ base process safe-exceptions ]; + homepage = "https://github.com/aiya000/hs-flip-cmd"; + description = "e.g. `flip systemctl foo.service start` does `systemctl start foo.service`"; + license = stdenv.lib.licenses.mit; + }) {}; + "flippers" = callPackage ({ mkDerivation, base }: mkDerivation { @@ -74378,30 +74449,18 @@ self: { }) {}; "flow" = callPackage - ({ mkDerivation, base, doctest, QuickCheck, template-haskell }: - mkDerivation { - pname = "flow"; - version = "1.0.10"; - sha256 = "1k8p475m1485nq4236jf53gmls264c5dy8x57zihb7gbvgnl71fj"; - libraryHaskellDepends = [ base ]; - testHaskellDepends = [ base doctest QuickCheck template-haskell ]; - homepage = "https://github.com/tfausak/flow#readme"; - description = "Write more understandable Haskell"; - license = stdenv.lib.licenses.mit; - }) {}; - - "flow_1_0_11" = callPackage ({ mkDerivation, base, doctest, QuickCheck, template-haskell }: mkDerivation { pname = "flow"; version = "1.0.11"; sha256 = "11cgab1wyqdjzyx6ygh91yl03w70aivspmlavl4if6p9yr5z9rw7"; + revision = "2"; + editedCabalFile = "13gyzkk29qkq8pnfnxvq2ymag2r3f6h1hpxk7yhy1r3k9hmp5469"; libraryHaskellDepends = [ base ]; testHaskellDepends = [ base doctest QuickCheck template-haskell ]; homepage = "https://github.com/tfausak/flow#readme"; description = "Write more understandable Haskell"; license = stdenv.lib.licenses.mit; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "flow-er" = callPackage @@ -75844,12 +75903,12 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "foundation_0_0_19" = callPackage + "foundation_0_0_20" = callPackage ({ mkDerivation, base, basement, gauge, ghc-prim }: mkDerivation { pname = "foundation"; - version = "0.0.19"; - sha256 = "053g5fdg9p74irvdh3g19hkb6g28h0sngkh2zqwplbxwy59dhfxq"; + version = "0.0.20"; + sha256 = "0bg4g0xf4pb2vmahnfp8c4f0a3v0av73lb5g8bwnp170khxfcsms"; libraryHaskellDepends = [ base basement ghc-prim ]; testHaskellDepends = [ base basement ]; benchmarkHaskellDepends = [ base basement gauge ]; @@ -76186,6 +76245,8 @@ self: { pname = "free"; version = "5"; sha256 = "1s4avwm4lnscmxv3fy0zws3vbg61sczgxm1m3cdnqxp95bd6p4c7"; + revision = "1"; + editedCabalFile = "13kxrs6097cwh80hawdmdrz4l5cqmrwkxh667spx8hx390102ddf"; libraryHaskellDepends = [ base bifunctors comonad containers distributive exceptions mtl profunctors semigroupoids semigroups template-haskell transformers @@ -76571,6 +76632,33 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "freer-simple_1_1_0_0" = callPackage + ({ mkDerivation, base, criterion, extensible-effects, free, mtl + , natural-transformation, QuickCheck, tasty, tasty-hunit + , tasty-quickcheck, transformers-base + }: + mkDerivation { + pname = "freer-simple"; + version = "1.1.0.0"; + sha256 = "00dvn620xg24pxw1h9p7dgl5wj25q77mfdsmxlmijsr0ysqwv611"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + base natural-transformation transformers-base + ]; + executableHaskellDepends = [ base ]; + testHaskellDepends = [ + base QuickCheck tasty tasty-hunit tasty-quickcheck + ]; + benchmarkHaskellDepends = [ + base criterion extensible-effects free mtl + ]; + homepage = "https://github.com/lexi-lambda/freer-simple#readme"; + description = "Implementation of a friendly effect system for Haskell"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "freesect" = callPackage ({ mkDerivation, array, base, cpphs, directory, mtl, parallel , pretty, random, syb @@ -79935,8 +80023,8 @@ self: { }: mkDerivation { pname = "geos"; - version = "0.1.1.1"; - sha256 = "0z4kqlgqg016233f8smj6jzjd6n7cgsvyff0npnghv1gdlr9pfwc"; + version = "0.1.1.2"; + sha256 = "1kggbm3hdg1x0ci3lfps1nglr5hk56ws96yfrv257zaz8kq64s1d"; libraryHaskellDepends = [ base bytestring mtl transformers vector ]; @@ -80274,25 +80362,6 @@ self: { }) {}; "ghc-events" = callPackage - ({ mkDerivation, array, base, binary, bytestring, containers, text - , vector - }: - mkDerivation { - pname = "ghc-events"; - version = "0.7.0"; - sha256 = "12vs1vpi969391k1n7apg2sd399dl5xdkjgb8rbn9sj0dmp9l946"; - isLibrary = true; - isExecutable = true; - libraryHaskellDepends = [ - array base binary bytestring containers text vector - ]; - executableHaskellDepends = [ base containers ]; - testHaskellDepends = [ base ]; - description = "Library and tool for parsing .eventlog files from GHC"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "ghc-events_0_7_1" = callPackage ({ mkDerivation, array, base, binary, bytestring, containers, text , vector }: @@ -80309,7 +80378,6 @@ self: { testHaskellDepends = [ base ]; description = "Library and tool for parsing .eventlog files from GHC"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "ghc-events-analyze" = callPackage @@ -81001,8 +81069,8 @@ self: { }: mkDerivation { pname = "ghc-vis"; - version = "0.8"; - sha256 = "03c73ip8k92fjrafaaj3mykql222y2fjiwx13lwvm5jk2p00is78"; + version = "0.9"; + sha256 = "134m5hzpbggifvigw2f4q6ci1lm5r2457va8lb0j7daiadq7xhcw"; enableSeparateDataOutput = true; libraryHaskellDepends = [ base cairo containers deepseq fgl ghc-heap-view graphviz gtk3 mtl @@ -83124,8 +83192,8 @@ self: { }: mkDerivation { pname = "github-release"; - version = "1.1.3"; - sha256 = "040yd8npjv54xfh4fv4i1p9x6qsa5qj1m5wblr7xjf0w090sblf0"; + version = "1.1.4"; + sha256 = "0jnxlvs69jc5d60s266f5clsfx1jr517b7yzl08hnka5km8qqdkb"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -83562,8 +83630,8 @@ self: { ({ mkDerivation, base, linear }: mkDerivation { pname = "gjk2d"; - version = "0.1.0.1"; - sha256 = "0yvbh660p65njr33py743ifjlm4njmb15b5sghbhhdi5g1b9qn6w"; + version = "0.1.0.2"; + sha256 = "163av54lmkqbayx9vkvviv3mdqq60zwkk9kjn75j7mk13d0iwpp3"; libraryHaskellDepends = [ base linear ]; testHaskellDepends = [ base linear ]; homepage = "https://github.com/suzumiyasmith/gjk2d#readme"; @@ -84452,16 +84520,17 @@ self: { }) {}; "gmpint" = callPackage - ({ mkDerivation, base, recursion-schemes }: + ({ mkDerivation, base, gmp, recursion-schemes }: mkDerivation { pname = "gmpint"; - version = "0.1.0.4"; - sha256 = "023acr1a69b9r380zlk8bsgfjw0l4h381pk7bwar7mbv3zzsnmxn"; + version = "0.1.0.5"; + sha256 = "1xi840k962nz3mkf48sc08z4lbdmx8rmix00gzxywyjyia33zg3r"; libraryHaskellDepends = [ base recursion-schemes ]; + librarySystemDepends = [ gmp ]; homepage = "https://github.com/vmchale/gmpint#readme"; description = "GMP integer conversions"; license = stdenv.lib.licenses.bsd3; - }) {}; + }) {inherit (pkgs) gmp;}; "gnome-desktop" = callPackage ({ mkDerivation, base, directory, gconf, glib, gtk, random }: @@ -84480,21 +84549,21 @@ self: { }) {}; "gnome-keyring" = callPackage - ({ mkDerivation, base, bytestring, c2hs, gnome_keyring, text, time + ({ mkDerivation, base, bytestring, c2hs, gnome-keyring, text, time }: mkDerivation { pname = "gnome-keyring"; version = "0.3.1"; sha256 = "08fayi4ixqyzin7lxyx2s3yap377y6nrdf4fmv7bi895j2k642l8"; libraryHaskellDepends = [ base bytestring text time ]; - librarySystemDepends = [ gnome_keyring ]; - libraryPkgconfigDepends = [ gnome_keyring ]; + librarySystemDepends = [ gnome-keyring ]; + libraryPkgconfigDepends = [ gnome-keyring ]; libraryToolDepends = [ c2hs ]; homepage = "https://john-millikin.com/software/haskell-gnome-keyring/"; description = "Bindings for libgnome-keyring"; license = stdenv.lib.licenses.gpl3; hydraPlatforms = stdenv.lib.platforms.none; - }) {inherit (pkgs.gnome2) gnome_keyring;}; + }) {inherit (pkgs.gnome2) gnome-keyring;}; "gnomevfs" = callPackage ({ mkDerivation, array, base, containers, glib, gnome_vfs @@ -84568,27 +84637,6 @@ self: { }) {inherit (pkgs) libidn;}; "gnuplot" = callPackage - ({ mkDerivation, array, base, containers, data-accessor - , data-accessor-transformers, deepseq, filepath, process, temporary - , time, transformers, utility-ht - }: - mkDerivation { - pname = "gnuplot"; - version = "0.5.5"; - sha256 = "1ka756zvc6q5hkjhi8zknb7d5whizmyl7ff0qzclx1n8qbx4jv98"; - isLibrary = true; - isExecutable = true; - enableSeparateDataOutput = true; - libraryHaskellDepends = [ - array base containers data-accessor data-accessor-transformers - deepseq filepath process temporary time transformers utility-ht - ]; - homepage = "http://www.haskell.org/haskellwiki/Gnuplot"; - description = "2D and 3D plots using gnuplot"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "gnuplot_0_5_5_1" = callPackage ({ mkDerivation, array, base, containers, data-accessor , data-accessor-transformers, deepseq, filepath, process , semigroups, temporary, time, transformers, utility-ht @@ -84608,7 +84656,6 @@ self: { homepage = "http://www.haskell.org/haskellwiki/Gnuplot"; description = "2D and 3D plots using gnuplot"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "gnutls" = callPackage @@ -87543,6 +87590,23 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "graphs_0_7_1" = callPackage + ({ mkDerivation, array, base, containers, transformers + , transformers-compat, void + }: + mkDerivation { + pname = "graphs"; + version = "0.7.1"; + sha256 = "02g21jpz8jm8j1kpszk8vglw1733z2jp32dc650z40nxlmxpmlxc"; + libraryHaskellDepends = [ + array base containers transformers transformers-compat void + ]; + homepage = "http://github.com/ekmett/graphs"; + description = "A simple monadic graph library"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "graphted" = callPackage ({ mkDerivation, base, indexed }: mkDerivation { @@ -93768,21 +93832,6 @@ self: { }) {}; "hashids" = callPackage - ({ mkDerivation, base, bytestring, containers, split }: - mkDerivation { - pname = "hashids"; - version = "1.0.2.3"; - sha256 = "0d15h8q4llq7x82g3r3pnyj1lw3ryj5q4nvi2i152agpx0sl5mzc"; - revision = "2"; - editedCabalFile = "1l4zz47c0kcpwi7l4dsizddi2c1a6k3v6a0b6w4wjylvzd066fz0"; - libraryHaskellDepends = [ base bytestring containers split ]; - testHaskellDepends = [ base bytestring containers split ]; - homepage = "http://hashids.org/"; - description = "Hashids generates short, unique, non-sequential ids from numbers"; - license = stdenv.lib.licenses.mit; - }) {}; - - "hashids_1_0_2_4" = callPackage ({ mkDerivation, base, bytestring, containers, split }: mkDerivation { pname = "hashids"; @@ -93793,7 +93842,6 @@ self: { homepage = "http://hashids.org/"; description = "Hashids generates short, unique, non-sequential ids from numbers"; license = stdenv.lib.licenses.mit; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "hashing" = callPackage @@ -94406,18 +94454,19 @@ self: { "haskell-dap" = callPackage ({ mkDerivation, array, base, bytestring, containers, deepseq , directory, filepath, ghc, ghc-boot, ghc-paths, ghci, haskeline - , process, time, transformers, unix + , process, text, time, transformers, unix }: mkDerivation { pname = "haskell-dap"; - version = "0.0.2.0"; - sha256 = "1wxidyga0abxyxwiy9qxjl8qj456rlcflav18jz3227yc6y4ziwz"; + version = "0.0.3.0"; + sha256 = "0l09s90mfwnyc3nz3xpgja6dh99qm2yvim4r0fxyvh0adfzkmiwn"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base ]; executableHaskellDepends = [ array base bytestring containers deepseq directory filepath ghc - ghc-boot ghc-paths ghci haskeline process time transformers unix + ghc-boot ghc-paths ghci haskeline process text time transformers + unix ]; homepage = "https://github.com/phoityne/haskell-dap"; description = "haskell-dap is a GHCi having DAP interface"; @@ -97095,8 +97144,8 @@ self: { }: mkDerivation { pname = "haskus-utils"; - version = "0.7.0.0"; - sha256 = "0s28m6bhc5a1q3z7r1pd9f1l0nhsk5lnsi8y9zqadyg8j4jcv9kx"; + version = "0.8.0.0"; + sha256 = "1r2r1198hhv75f4yqcy5crr764dvvj766bgp3v3b5sdl603q8cl3"; libraryHaskellDepends = [ base containers extra file-embed list-t mtl stm stm-containers template-haskell transformers vector @@ -100485,6 +100534,20 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "hex-text" = callPackage + ({ mkDerivation, base, base16-bytestring, bytestring, doctest, text + }: + mkDerivation { + pname = "hex-text"; + version = "0.1.0.0"; + sha256 = "0if46jkzd67jwp56vmvd021qq2vfzpmaf1v2w07cy0w61icfvjxr"; + libraryHaskellDepends = [ base base16-bytestring bytestring text ]; + testHaskellDepends = [ base doctest ]; + homepage = "https://github.com/typeclasses/hex-text"; + description = "ByteString-Text hexidecimal conversions"; + license = stdenv.lib.licenses.asl20; + }) {}; + "hexchat" = callPackage ({ mkDerivation, base, containers }: mkDerivation { @@ -106339,36 +106402,6 @@ self: { }) {}; "hprotoc" = callPackage - ({ mkDerivation, alex, array, base, binary, bytestring, containers - , directory, filepath, haskell-src-exts, mtl, parsec - , protocol-buffers, protocol-buffers-descriptor, utf8-string - }: - mkDerivation { - pname = "hprotoc"; - version = "2.4.6"; - sha256 = "05n8mgrbskdx2r78kvl1q8zzgha9jsds7gvajkc54wcgprfhv42z"; - revision = "1"; - editedCabalFile = "0bs5h6mq6yrwiwfq0l20b4an73myxq6gbaxjffdifscqzq8pdk94"; - isLibrary = true; - isExecutable = true; - libraryHaskellDepends = [ - array base binary bytestring containers directory filepath - haskell-src-exts mtl parsec protocol-buffers - protocol-buffers-descriptor utf8-string - ]; - libraryToolDepends = [ alex ]; - executableHaskellDepends = [ - array base binary bytestring containers directory filepath - haskell-src-exts mtl parsec protocol-buffers - protocol-buffers-descriptor utf8-string - ]; - executableToolDepends = [ alex ]; - homepage = "https://github.com/k-bx/protocol-buffers"; - description = "Parse Google Protocol Buffer specifications"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "hprotoc_2_4_7" = callPackage ({ mkDerivation, alex, array, base, binary, bytestring, containers , directory, filepath, haskell-src-exts, mtl, parsec , protocol-buffers, protocol-buffers-descriptor, utf8-string @@ -106394,7 +106427,6 @@ self: { homepage = "https://github.com/k-bx/protocol-buffers"; description = "Parse Google Protocol Buffer specifications"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "hprotoc-fork" = callPackage @@ -107384,20 +107416,20 @@ self: { }) {}; "hs2ats" = callPackage - ({ mkDerivation, ansi-wl-pprint, base, cases, composition-prelude + ({ mkDerivation, ansi-wl-pprint, base, casing, composition-prelude , cpphs, criterion, deepseq, haskell-src-exts, hspec , hspec-dirstream, language-ats, lens, optparse-generic - , system-filepath, text + , system-filepath }: mkDerivation { pname = "hs2ats"; - version = "0.2.1.5"; - sha256 = "0jxyj9pggs4m2ypw12z5xjrc5r0cq5gxi3dllbmvvablxlwzfkv1"; + version = "0.2.1.7"; + sha256 = "01hinvxj9v04kzvyck01z4ky3b1gmffwxvl7wri2ggps26h2d5gf"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - ansi-wl-pprint base cases composition-prelude cpphs deepseq - haskell-src-exts language-ats lens optparse-generic text + ansi-wl-pprint base casing composition-prelude cpphs deepseq + haskell-src-exts language-ats lens optparse-generic ]; executableHaskellDepends = [ base ]; testHaskellDepends = [ @@ -110043,23 +110075,20 @@ self: { "hspkcs11" = callPackage ({ mkDerivation, base, bytestring, c2hs, cipher-aes, cprng-aes - , crypto-api, RSA, testpack, unix, utf8-string + , crypto-api, RSA, unix, utf8-string }: mkDerivation { pname = "hspkcs11"; - version = "0.3"; - sha256 = "1cgp0fqwh4r33c4g7pm95cim78kjr9yyq7z1n79f3c30lnvsany9"; + version = "0.5"; + sha256 = "028vri05152a983w87c3zm6byhqrcws3zqk9f419anmhmvz0akwx"; isLibrary = true; isExecutable = true; - libraryHaskellDepends = [ - base bytestring crypto-api RSA unix utf8-string - ]; + libraryHaskellDepends = [ base bytestring unix utf8-string ]; libraryToolDepends = [ c2hs ]; executableHaskellDepends = [ - base bytestring cipher-aes cprng-aes crypto-api RSA testpack unix + base bytestring cipher-aes cprng-aes crypto-api RSA unix utf8-string ]; - executableToolDepends = [ c2hs ]; homepage = "https://github.com/denisenkom/hspkcs11"; description = "Wrapper for PKCS #11 interface"; license = stdenv.lib.licenses.mit; @@ -112820,12 +112849,12 @@ self: { license = stdenv.lib.licenses.mit; }) {}; - "hunit-dejafu_1_0_1_0" = callPackage + "hunit-dejafu_1_0_1_1" = callPackage ({ mkDerivation, base, dejafu, exceptions, HUnit }: mkDerivation { pname = "hunit-dejafu"; - version = "1.0.1.0"; - sha256 = "1vnxxyjycbz5xcfyyrl2hi2xkfqdqajlx1jbxvmq3d0w76p3zvdk"; + version = "1.0.1.1"; + sha256 = "0q3a9pxmg8w2q3h38rz1yd7hhf0q4j1aq00ssgnnr2pzvnqgizya"; libraryHaskellDepends = [ base dejafu exceptions HUnit ]; homepage = "https://github.com/barrucadu/dejafu"; description = "Deja Fu support for the HUnit test framework"; @@ -116145,8 +116174,8 @@ self: { }: mkDerivation { pname = "imap"; - version = "0.3.0.5"; - sha256 = "1wkm6agp0gsqg8lqfqp7sm0aq64426lpfw56nmnzvfk1hkq2gwmp"; + version = "0.3.0.6"; + sha256 = "1acmjpp2l4d7p5yxayd3w6h8mc29siq3y3s50cj0n8japmqrrcgm"; libraryHaskellDepends = [ attoparsec base bytestring connection containers derive either exceptions hslogger list-t network pipes random rolling-queue stm @@ -117967,6 +117996,23 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "intern_0_9_2" = callPackage + ({ mkDerivation, array, base, bytestring, hashable, text + , unordered-containers + }: + mkDerivation { + pname = "intern"; + version = "0.9.2"; + sha256 = "081fyiq00cvx4nyagr34kwnag9njv65wdps5j4ydin6sjq7b58wk"; + libraryHaskellDepends = [ + array base bytestring hashable text unordered-containers + ]; + homepage = "http://github.com/ekmett/intern/"; + description = "Efficient hash-consing for arbitrary data types"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "internetmarke" = callPackage ({ mkDerivation, base, explicit-exception, HPDF, parsec, process , transformers, utility-ht @@ -118848,26 +118894,6 @@ self: { }) {}; "iproute" = callPackage - ({ mkDerivation, appar, base, byteorder, containers, doctest, hspec - , network, QuickCheck, safe - }: - mkDerivation { - pname = "iproute"; - version = "1.7.1"; - sha256 = "1viyxq3m1aifl05w0hxwrhhhcfpmvwz4ymil2gngi4nfm0yd1f2p"; - libraryHaskellDepends = [ - appar base byteorder containers network - ]; - testHaskellDepends = [ - appar base byteorder containers doctest hspec network QuickCheck - safe - ]; - homepage = "http://www.mew.org/~kazu/proj/iproute/"; - description = "IP Routing Table"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "iproute_1_7_2" = callPackage ({ mkDerivation, appar, base, byteorder, containers, doctest, hspec , network, QuickCheck, safe }: @@ -118885,7 +118911,6 @@ self: { homepage = "http://www.mew.org/~kazu/proj/iproute/"; description = "IP Routing Table"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "iptables-helpers" = callPackage @@ -120208,26 +120233,6 @@ self: { }) {}; "jack" = callPackage - ({ mkDerivation, array, base, bytestring, enumset, event-list - , explicit-exception, libjack2, midi, non-negative, transformers - }: - mkDerivation { - pname = "jack"; - version = "0.7.1.1"; - sha256 = "0h3c62knq5hblsplgp25wm94hbv6id8c97wv8xgzbvalj4lmsyyi"; - isLibrary = true; - isExecutable = true; - libraryHaskellDepends = [ - array base bytestring enumset event-list explicit-exception midi - non-negative transformers - ]; - libraryPkgconfigDepends = [ libjack2 ]; - homepage = "http://www.haskell.org/haskellwiki/JACK"; - description = "Bindings for the JACK Audio Connection Kit"; - license = "GPL"; - }) {inherit (pkgs) libjack2;}; - - "jack_0_7_1_3" = callPackage ({ mkDerivation, array, base, bytestring, enumset, event-list , explicit-exception, libjack2, midi, non-negative, semigroups , transformers @@ -120246,7 +120251,6 @@ self: { homepage = "http://www.haskell.org/haskellwiki/JACK"; description = "Bindings for the JACK Audio Connection Kit"; license = "GPL"; - hydraPlatforms = stdenv.lib.platforms.none; }) {inherit (pkgs) libjack2;}; "jack-bindings" = callPackage @@ -122749,6 +122753,8 @@ self: { pname = "kan-extensions"; version = "5.1"; sha256 = "019jyrilk97i5bj8v044ig03m66h02q4b073m1fksrk7y9c8wgqr"; + revision = "1"; + editedCabalFile = "1xaam291gxmsbibi2ai4l6c36iwkpmfy6vik1916j6jp326pa3z9"; libraryHaskellDepends = [ adjunctions array base comonad containers contravariant distributive fail free mtl profunctors semigroupoids tagged @@ -125452,17 +125458,18 @@ self: { "language-ats" = callPackage ({ mkDerivation, alex, ansi-terminal, ansi-wl-pprint, array, base - , composition-prelude, criterion, deepseq, happy, hspec - , hspec-dirstream, lens, recursion-schemes, system-filepath + , composition-prelude, containers, criterion, deepseq, happy, hspec + , hspec-dirstream, lens, mtl, recursion-schemes, system-filepath + , transformers }: mkDerivation { pname = "language-ats"; - version = "0.3.0.7"; - sha256 = "0q1nap6277w13f389jlvyp62018ywzay7rc04j6n5wmcs240inff"; + version = "1.0.2.1"; + sha256 = "0ijb6fykbm96i8vankidai9ksqi239rf7iwknbxxf0zwxrwynzsj"; enableSeparateDataOutput = true; libraryHaskellDepends = [ - ansi-terminal ansi-wl-pprint array base composition-prelude deepseq - lens recursion-schemes + ansi-terminal ansi-wl-pprint array base composition-prelude + containers deepseq lens mtl recursion-schemes transformers ]; libraryToolDepends = [ alex happy ]; testHaskellDepends = [ @@ -125518,46 +125525,7 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; - "language-c_0_7_0" = callPackage - ({ mkDerivation, alex, array, base, bytestring, containers - , directory, filepath, happy, pretty, process, syb - }: - mkDerivation { - pname = "language-c"; - version = "0.7.0"; - sha256 = "1j4slggwj5g0rnrdxafgn2savv14sl2nqk7lfy3qj73vmpn1d86d"; - libraryHaskellDepends = [ - array base bytestring containers directory filepath pretty process - syb - ]; - libraryToolDepends = [ alex happy ]; - testHaskellDepends = [ base directory filepath process ]; - homepage = "http://visq.github.io/language-c/"; - description = "Analysis and generation of C code"; - license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; - }) {}; - "language-c" = callPackage - ({ mkDerivation, alex, array, base, bytestring, containers - , directory, filepath, happy, pretty, process, syb - }: - mkDerivation { - pname = "language-c"; - version = "0.7.1"; - sha256 = "1jm9yzj727wsbfpnqkvbavbaq0vzv4i2p8p2kqqwkgmkz4ip2i57"; - libraryHaskellDepends = [ - array base bytestring containers directory filepath pretty process - syb - ]; - libraryToolDepends = [ alex happy ]; - testHaskellDepends = [ base directory filepath process ]; - homepage = "http://visq.github.io/language-c/"; - description = "Analysis and generation of C code"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "language-c_0_7_2" = callPackage ({ mkDerivation, alex, array, base, bytestring, containers , directory, filepath, happy, pretty, process, syb }: @@ -125574,7 +125542,6 @@ self: { homepage = "http://visq.github.io/language-c/"; description = "Analysis and generation of C code"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "language-c-comments" = callPackage @@ -126278,54 +126245,6 @@ self: { }) {}; "language-puppet" = callPackage - ({ mkDerivation, aeson, ansi-wl-pprint, attoparsec, base - , base16-bytestring, bytestring, case-insensitive, containers - , cryptonite, directory, exceptions, filecache, filepath - , formatting, Glob, hashable, hruby, hslogger, hspec - , hspec-megaparsec, http-api-data, http-client, HUnit, lens - , lens-aeson, megaparsec, memory, mtl, neat-interpolation - , operational, optparse-applicative, parallel-io, parsec - , pcre-utils, process, protolude, random, regex-pcre-builtin - , scientific, servant, servant-client, split, stm - , strict-base-types, temporary, text, time, transformers, unix - , unordered-containers, vector, yaml - }: - mkDerivation { - pname = "language-puppet"; - version = "1.3.14"; - sha256 = "1vf80dfdi2w5kwkbpqjqd9iahi7fg8qw5h243x8j286hzg3hx59d"; - isLibrary = true; - isExecutable = true; - enableSeparateDataOutput = true; - libraryHaskellDepends = [ - aeson ansi-wl-pprint attoparsec base base16-bytestring bytestring - case-insensitive containers cryptonite directory exceptions - filecache filepath formatting hashable hruby hslogger hspec - http-api-data http-client lens lens-aeson megaparsec memory mtl - operational parsec pcre-utils process protolude random - regex-pcre-builtin scientific servant servant-client split stm - strict-base-types text time transformers unix unordered-containers - vector yaml - ]; - executableHaskellDepends = [ - aeson ansi-wl-pprint base bytestring containers Glob hslogger - http-client lens megaparsec mtl optparse-applicative parallel-io - regex-pcre-builtin strict-base-types text transformers - unordered-containers vector yaml - ]; - testHaskellDepends = [ - ansi-wl-pprint base Glob hslogger hspec hspec-megaparsec HUnit lens - megaparsec mtl neat-interpolation protolude scientific - strict-base-types temporary text transformers unix - unordered-containers vector - ]; - homepage = "http://lpuppet.banquise.net/"; - description = "Tools to parse and evaluate the Puppet DSL"; - license = stdenv.lib.licenses.bsd3; - hydraPlatforms = [ "x86_64-linux" ]; - }) {}; - - "language-puppet_1_3_15" = callPackage ({ mkDerivation, aeson, ansi-wl-pprint, attoparsec, base , base16-bytestring, bytestring, case-insensitive, containers , cryptonite, directory, exceptions, filecache, filepath @@ -126370,7 +126289,7 @@ self: { homepage = "http://lpuppet.banquise.net/"; description = "Tools to parse and evaluate the Puppet DSL"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; + hydraPlatforms = [ "x86_64-linux" ]; }) {}; "language-python" = callPackage @@ -131912,7 +131831,7 @@ self: { license = stdenv.lib.licenses.mit; }) {}; - "log-warper_1_8_7" = callPackage + "log-warper_1_8_10" = callPackage ({ mkDerivation, aeson, ansi-terminal, async, base, containers , data-default, deepseq, directory, filepath, fmt, hspec , hspec-discover, HUnit, lifted-async, markdown-unlit, microlens @@ -131923,8 +131842,8 @@ self: { }: mkDerivation { pname = "log-warper"; - version = "1.8.7"; - sha256 = "0bwk9wg2dhc56h7hwbnlxmw22pwswdlcf2bpjx62f9135q2cs7d8"; + version = "1.8.10"; + sha256 = "0wl1i68xnvla6fzgxfkqbk6hhqx9h0yp4br30y0fzwyk8p5v4l37"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -133443,37 +133362,6 @@ self: { }) {}; "lxd-client" = callPackage - ({ mkDerivation, aeson, async, base, bimap, bytestring, connection - , containers, data-default, directory, either, exceptions, filepath - , hspec, hspec-core, http-api-data, http-client, http-client-tls - , http-media, http-types, mtl, network, random, semigroups, servant - , servant-client, text, tls, transformers, turtle, unix, uuid - , websockets, x509, x509-store, x509-validation - }: - mkDerivation { - pname = "lxd-client"; - version = "0.1.0.5"; - sha256 = "1981q1b71xgmxlis2hydhzhcwcspyrwnllg3fdrajv7m9z1zlryc"; - isLibrary = true; - isExecutable = true; - libraryHaskellDepends = [ - aeson async base bimap bytestring connection containers - data-default directory either exceptions filepath http-api-data - http-client http-client-tls http-media http-types mtl network - semigroups servant servant-client text tls transformers unix - websockets x509 x509-store x509-validation - ]; - executableHaskellDepends = [ base ]; - testHaskellDepends = [ - base exceptions hspec hspec-core random text turtle uuid - ]; - homepage = "https://github.com/hverr/haskell-lxd-client#readme"; - description = "LXD client written in Haskell"; - license = stdenv.lib.licenses.gpl3; - hydraPlatforms = stdenv.lib.platforms.none; - }) {}; - - "lxd-client_0_1_0_6" = callPackage ({ mkDerivation, aeson, async, base, bimap, bytestring, connection , containers, data-default, directory, either, exceptions, filepath , hspec, hspec-core, http-api-data, http-client, http-client-tls @@ -133620,28 +133508,6 @@ self: { }) {}; "lzma-conduit" = callPackage - ({ mkDerivation, base, base-compat, bytestring, conduit, HUnit - , lzma, QuickCheck, resourcet, test-framework, test-framework-hunit - , test-framework-quickcheck2, transformers - }: - mkDerivation { - pname = "lzma-conduit"; - version = "1.2.0"; - sha256 = "0jpzl1nb422d1a5k4ylh5wkl225x816xnx1y7qkd8wzxp5xxa7ba"; - libraryHaskellDepends = [ - base bytestring conduit lzma resourcet transformers - ]; - testHaskellDepends = [ - base base-compat bytestring conduit HUnit QuickCheck resourcet - test-framework test-framework-hunit test-framework-quickcheck2 - ]; - homepage = "http://github.com/alphaHeavy/lzma-conduit"; - description = "Conduit interface for lzma/xz compression"; - license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; - }) {}; - - "lzma-conduit_1_2_1" = callPackage ({ mkDerivation, base, base-compat, bytestring, conduit, HUnit , lzma, QuickCheck, resourcet, test-framework, test-framework-hunit , test-framework-quickcheck2, transformers @@ -134510,17 +134376,6 @@ self: { }) {}; "managed" = callPackage - ({ mkDerivation, base, transformers }: - mkDerivation { - pname = "managed"; - version = "1.0.5"; - sha256 = "1q3j8w6z8jaxh5a0ifzj51vipyhfrb1hk6l87pm319ysv91rkjdr"; - libraryHaskellDepends = [ base transformers ]; - description = "A monad for managed values"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "managed_1_0_6" = callPackage ({ mkDerivation, base, transformers }: mkDerivation { pname = "managed"; @@ -134529,7 +134384,6 @@ self: { libraryHaskellDepends = [ base transformers ]; description = "A monad for managed values"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "manatee" = callPackage @@ -135550,6 +135404,8 @@ self: { pname = "massiv"; version = "0.1.0.0"; sha256 = "1hy87l8jv06jmgws7r28qh44ja1a4swpaki9z8dn9lviddlhiz3d"; + revision = "1"; + editedCabalFile = "0y4dyambndn36qa5v4raxi16lfr91bpj9jqksy1kkrf65wr89cma"; libraryHaskellDepends = [ base data-default-class deepseq ghc-prim primitive vector ]; @@ -135569,8 +135425,8 @@ self: { pname = "massiv-io"; version = "0.1.0.0"; sha256 = "1qj94ypn5yzl3pjdnpddjv926d1wjcvm1n673mg4i0x5pr71w7lw"; - revision = "1"; - editedCabalFile = "1k6hg12q6m6gi6w6km04r6hx7zq7xfdhxz90arlm1izag3dv1ic2"; + revision = "2"; + editedCabalFile = "1bzn45kcf3j275bzj00hsvxvxi3csm08bflnsbmy8ixkqcfdlizy"; libraryHaskellDepends = [ base bytestring data-default deepseq directory filepath JuicyPixels massiv netpbm process vector @@ -137995,29 +137851,6 @@ self: { }) {}; "midi" = callPackage - ({ mkDerivation, base, binary, bytestring, event-list - , explicit-exception, monoid-transformer, non-negative, QuickCheck - , random, transformers, utility-ht - }: - mkDerivation { - pname = "midi"; - version = "0.2.2.1"; - sha256 = "1kq3218g5cisyg6vmm4pm096zjs1954s6ng4pkdx8pxp39rk26a4"; - libraryHaskellDepends = [ - base binary bytestring event-list explicit-exception - monoid-transformer non-negative QuickCheck random transformers - utility-ht - ]; - testHaskellDepends = [ - base bytestring event-list explicit-exception non-negative - QuickCheck transformers utility-ht - ]; - homepage = "http://www.haskell.org/haskellwiki/MIDI"; - description = "Handling of MIDI messages and files"; - license = "GPL"; - }) {}; - - "midi_0_2_2_2" = callPackage ({ mkDerivation, base, binary, bytestring, event-list , explicit-exception, monoid-transformer, non-negative, QuickCheck , random, semigroups, transformers, utility-ht @@ -138038,7 +137871,6 @@ self: { homepage = "http://www.haskell.org/haskellwiki/MIDI"; description = "Handling of MIDI messages and files"; license = "GPL"; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "midi-alsa" = callPackage @@ -139196,6 +139028,20 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "mmorph_1_1_1" = callPackage + ({ mkDerivation, base, mtl, transformers, transformers-compat }: + mkDerivation { + pname = "mmorph"; + version = "1.1.1"; + sha256 = "17hhfvdr2cclrhslsph3jaly7gfn7caajbzh7xr2prgvxmjhsdg3"; + libraryHaskellDepends = [ + base mtl transformers transformers-compat + ]; + description = "Monad morphisms"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "mmtf" = callPackage ({ mkDerivation, base, binary, bytestring, containers, data-msgpack , hspec, QuickCheck, text @@ -139576,29 +139422,6 @@ self: { }) {}; "moesocks" = callPackage - ({ mkDerivation, aeson, async, attoparsec, base, binary, bytestring - , containers, cryptohash, hslogger, HsOpenSSL, iproute, lens - , lens-aeson, mtl, network, optparse-applicative, random, stm - , strict, text, time, transformers, unordered-containers - }: - mkDerivation { - pname = "moesocks"; - version = "1.0.0.43"; - sha256 = "1wbxvsisk1aah186xn32sndw8djrk96dpawhsmygxkncn264599f"; - isLibrary = false; - isExecutable = true; - executableHaskellDepends = [ - aeson async attoparsec base binary bytestring containers cryptohash - hslogger HsOpenSSL iproute lens lens-aeson mtl network - optparse-applicative random stm strict text time transformers - unordered-containers - ]; - homepage = "https://github.com/nfjinjing/moesocks"; - description = "A functional firewall killer"; - license = stdenv.lib.licenses.asl20; - }) {}; - - "moesocks_1_0_0_44" = callPackage ({ mkDerivation, aeson, async, attoparsec, base, binary, bytestring , containers, cryptohash, hslogger, HsOpenSSL, iproute, lens , lens-aeson, mtl, network, optparse-applicative, random, stm @@ -139619,7 +139442,6 @@ self: { homepage = "https://github.com/nfjinjing/moesocks"; description = "A functional firewall killer"; license = stdenv.lib.licenses.asl20; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "mohws" = callPackage @@ -139880,6 +139702,23 @@ self: { license = "GPL"; }) {}; + "monad-coroutine_0_9_0_4" = callPackage + ({ mkDerivation, base, monad-parallel, transformers + , transformers-compat + }: + mkDerivation { + pname = "monad-coroutine"; + version = "0.9.0.4"; + sha256 = "1rsxzry8qk5229vx4iw4jrzbbc82m80m1nlxlq73k5k20h9gzq0k"; + libraryHaskellDepends = [ + base monad-parallel transformers transformers-compat + ]; + homepage = "http://trac.haskell.org/SCC/wiki/monad-coroutine"; + description = "Coroutine monad transformer for suspending and resuming monadic computations"; + license = "GPL"; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "monad-dijkstra" = callPackage ({ mkDerivation, base, free, hlint, mtl, psqueues, tasty , tasty-hspec, transformers @@ -140386,6 +140225,22 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "monad-parallel_0_7_2_3" = callPackage + ({ mkDerivation, base, parallel, transformers, transformers-compat + }: + mkDerivation { + pname = "monad-parallel"; + version = "0.7.2.3"; + sha256 = "12ahni860pfkdj70f9d0dg2h93gl0d9qav8llcmgh5z7dg1vi3qj"; + libraryHaskellDepends = [ + base parallel transformers transformers-compat + ]; + homepage = "http://trac.haskell.org/SCC/wiki/monad-parallel"; + description = "Parallel execution of monadic computations"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "monad-parallel-progressbar" = callPackage ({ mkDerivation, base, monad-parallel, monadIO , terminal-progress-bar @@ -140852,6 +140707,24 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "monadcryptorandom_0_7_2" = callPackage + ({ mkDerivation, base, bytestring, crypto-api, exceptions, mtl + , tagged, transformers, transformers-compat + }: + mkDerivation { + pname = "monadcryptorandom"; + version = "0.7.2"; + sha256 = "12inwjh1smgrp62hvrca7608vjaff576503xi7ymbkq9szk8rkj9"; + libraryHaskellDepends = [ + base bytestring crypto-api exceptions mtl tagged transformers + transformers-compat + ]; + homepage = "https://github.com/TomMD/monadcryptorandom"; + description = "A monad for using CryptoRandomGen"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "monadfibre" = callPackage ({ mkDerivation, base, monadbi }: mkDerivation { @@ -141119,37 +140992,6 @@ self: { }) {}; "mongoDB" = callPackage - ({ mkDerivation, array, base, base16-bytestring, base64-bytestring - , binary, bson, bytestring, conduit, conduit-extra, containers - , criterion, cryptohash, data-default-class, hashtables, hspec - , lifted-base, monad-control, mtl, network, nonce, old-locale - , parsec, pureMD5, random, random-shuffle, resourcet, tagged, text - , time, tls, transformers, transformers-base - }: - mkDerivation { - pname = "mongoDB"; - version = "2.3.0.2"; - sha256 = "10gl9116hkjvm12ysgr1pi1vlk4d9jbkxgrcql6qhyvpsgv7s7bd"; - libraryHaskellDepends = [ - array base base16-bytestring base64-bytestring binary bson - bytestring conduit conduit-extra containers cryptohash - data-default-class hashtables lifted-base monad-control mtl network - nonce parsec pureMD5 random random-shuffle resourcet tagged text - time tls transformers transformers-base - ]; - testHaskellDepends = [ base hspec mtl old-locale text time ]; - benchmarkHaskellDepends = [ - array base base16-bytestring base64-bytestring binary bson - bytestring containers criterion cryptohash hashtables lifted-base - monad-control mtl network nonce parsec random random-shuffle text - transformers-base - ]; - homepage = "https://github.com/mongodb-haskell/mongodb"; - description = "Driver (client) for MongoDB, a free, scalable, fast, document DBMS"; - license = stdenv.lib.licenses.asl20; - }) {}; - - "mongoDB_2_3_0_4" = callPackage ({ mkDerivation, array, base, base16-bytestring, base64-bytestring , binary, bson, bytestring, conduit, conduit-extra, containers , criterion, cryptohash, data-default-class, hashtables, hspec @@ -141178,7 +141020,6 @@ self: { homepage = "https://github.com/mongodb-haskell/mongodb"; description = "Driver (client) for MongoDB, a free, scalable, fast, document DBMS"; license = stdenv.lib.licenses.asl20; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "mongodb-queue" = callPackage @@ -141417,17 +141258,6 @@ self: { }) {}; "monoid-transformer" = callPackage - ({ mkDerivation, base }: - mkDerivation { - pname = "monoid-transformer"; - version = "0.0.3"; - sha256 = "1f06ppvv50w5pacm4bs89zwkydih626cgbd2z6xqbp8cmhg6dj4l"; - libraryHaskellDepends = [ base ]; - description = "Monoid counterparts to some ubiquitous monad transformers"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "monoid-transformer_0_0_4" = callPackage ({ mkDerivation, base, semigroups }: mkDerivation { pname = "monoid-transformer"; @@ -141436,7 +141266,6 @@ self: { libraryHaskellDepends = [ base semigroups ]; description = "Monoid counterparts to some ubiquitous monad transformers"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "monoidal-containers" = callPackage @@ -141718,38 +141547,6 @@ self: { }) {}; "morte" = callPackage - ({ mkDerivation, alex, array, base, binary, code-page, containers - , criterion, deepseq, Earley, http-client, http-client-tls - , microlens, microlens-mtl, mtl, optparse-applicative, pipes - , QuickCheck, system-fileio, system-filepath, tasty, tasty-hunit - , tasty-quickcheck, text, text-format, transformers - }: - mkDerivation { - pname = "morte"; - version = "1.6.14"; - sha256 = "1wrm982gxm8hg2x8srm5ibp2s8752apsz2ljlldway2n49cf2bsm"; - isLibrary = true; - isExecutable = true; - enableSeparateDataOutput = true; - libraryHaskellDepends = [ - array base binary containers deepseq Earley http-client - http-client-tls microlens microlens-mtl pipes system-fileio - system-filepath text text-format transformers - ]; - libraryToolDepends = [ alex ]; - executableHaskellDepends = [ - base code-page optparse-applicative text text-format - ]; - testHaskellDepends = [ - base mtl QuickCheck system-filepath tasty tasty-hunit - tasty-quickcheck text transformers - ]; - benchmarkHaskellDepends = [ base criterion system-filepath text ]; - description = "A bare-bones calculus of constructions"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "morte_1_6_15" = callPackage ({ mkDerivation, alex, array, base, binary, code-page, containers , criterion, deepseq, Earley, http-client, http-client-tls , microlens, microlens-mtl, mtl, optparse-applicative, pipes @@ -141779,7 +141576,6 @@ self: { benchmarkHaskellDepends = [ base criterion system-filepath text ]; description = "A bare-bones calculus of constructions"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "mosaico-lib" = callPackage @@ -142403,6 +142199,19 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "mtl_2_2_2" = callPackage + ({ mkDerivation, base, transformers }: + mkDerivation { + pname = "mtl"; + version = "2.2.2"; + sha256 = "1xmy5741h8cyy0d91ahvqdz2hykkk20l8br7lg1rccnkis5g80w8"; + libraryHaskellDepends = [ base transformers ]; + homepage = "http://github.com/haskell/mtl"; + description = "Monad classes, using functional dependencies"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "mtl-c" = callPackage ({ mkDerivation, base, mtl, transformers }: mkDerivation { @@ -143889,6 +143698,54 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {inherit (pkgs) mxnet;}; + "my-package-testing" = callPackage + ({ mkDerivation, base, Cabal, cabal-doctest, doctest, hspec + , hspec-discover, lens, QuickCheck, servant, servant-auth + , servant-auth-docs, servant-docs, template-haskell, text + }: + mkDerivation { + pname = "my-package-testing"; + version = "1.0.6"; + sha256 = "188f5k556z8pxg67l16si99n4h4c408za8n123p3y0c95ixnvr4h"; + revision = "1"; + editedCabalFile = "03x6fh9c0d9l0klv67v3kwy5qf78cmy3qxwvmyz2pmrknc4cmkvs"; + setupHaskellDepends = [ base Cabal cabal-doctest ]; + libraryHaskellDepends = [ + base lens servant servant-auth servant-docs text + ]; + testHaskellDepends = [ + base doctest hspec lens QuickCheck servant servant-auth + servant-auth-docs servant-docs template-haskell text + ]; + testToolDepends = [ hspec-discover ]; + description = "spam"; + license = stdenv.lib.licenses.bsd3; + }) {}; + + "my-test-docs" = callPackage + ({ mkDerivation, base, Cabal, cabal-doctest, doctest, hspec + , hspec-discover, lens, QuickCheck, servant, servant-auth + , servant-auth-docs, servant-docs, template-haskell, text + }: + mkDerivation { + pname = "my-test-docs"; + version = "1.0.12"; + sha256 = "1q3fzwqyams7748cy8q7adkn93jh4dds83x0ns44n9ca4myjvrxj"; + revision = "1"; + editedCabalFile = "0mzmqcz800pacp1h4qwz6ynjqr7jsjgq3xkrzvxkx7s32gmqkzyn"; + setupHaskellDepends = [ base Cabal cabal-doctest ]; + libraryHaskellDepends = [ + base lens servant servant-auth servant-docs text + ]; + testHaskellDepends = [ + base doctest hspec lens QuickCheck servant servant-auth + servant-auth-docs servant-docs template-haskell text + ]; + testToolDepends = [ hspec-discover ]; + description = "spam"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "myTestlll" = callPackage ({ mkDerivation, ansi-terminal, array, arrows, base, bytestring , Cabal, CCA, containers, deepseq, Euterpea, ghc-prim, HCodecs @@ -144357,7 +144214,7 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; - "nakadi-client_0_5_0_0" = callPackage + "nakadi-client_0_5_0_3" = callPackage ({ mkDerivation, aeson, aeson-casing, async, base, bytestring , classy-prelude, conduit, conduit-combinators, conduit-extra , containers, exceptions, fast-logger, hashable, http-client @@ -144370,8 +144227,8 @@ self: { }: mkDerivation { pname = "nakadi-client"; - version = "0.5.0.0"; - sha256 = "10n278iqy8kp6vdx1d5rdlsbsk74m9s0fyi3w1vprrs0va92a06b"; + version = "0.5.0.3"; + sha256 = "0c0jrvvlk3mxwka6b1996gylgkhqqh023wc4vxg98qaaxpy851x4"; libraryHaskellDepends = [ aeson aeson-casing base bytestring conduit conduit-combinators conduit-extra containers exceptions hashable http-client @@ -145809,23 +145666,6 @@ self: { }) {}; "netwire-input-glfw" = callPackage - ({ mkDerivation, base, containers, GLFW-b, mtl, netwire-input, stm - }: - mkDerivation { - pname = "netwire-input-glfw"; - version = "0.0.7"; - sha256 = "1rsvhwxrr00qpff7adwiwci5fl6hbv8r8mvxhkq3az235w9pll8g"; - isLibrary = true; - isExecutable = true; - libraryHaskellDepends = [ - base containers GLFW-b mtl netwire-input stm - ]; - homepage = "https://www.github.com/Mokosha/netwire-input-glfw"; - description = "GLFW instance of netwire-input"; - license = stdenv.lib.licenses.mit; - }) {}; - - "netwire-input-glfw_0_0_8" = callPackage ({ mkDerivation, base, containers, GLFW-b, mtl, netwire-input, stm }: mkDerivation { @@ -145840,7 +145680,6 @@ self: { homepage = "https://www.github.com/Mokosha/netwire-input-glfw"; description = "GLFW instance of netwire-input"; license = stdenv.lib.licenses.mit; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "netwire-input-javascript" = callPackage @@ -147084,20 +146923,6 @@ self: { }) {}; "newtype-generics" = callPackage - ({ mkDerivation, base, hspec, hspec-discover, HUnit, transformers - }: - mkDerivation { - pname = "newtype-generics"; - version = "0.5.1"; - sha256 = "1cm9v5agz6dmqd2ijwl1llgabihk49zjvx0wxrvhlmdfj6b44gr7"; - libraryHaskellDepends = [ base transformers ]; - testHaskellDepends = [ base hspec HUnit ]; - testToolDepends = [ hspec-discover ]; - description = "A typeclass and set of functions for working with newtypes, with generics support"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "newtype-generics_0_5_2_1" = callPackage ({ mkDerivation, base, criterion, hspec, hspec-discover, HUnit , semigroups, transformers }: @@ -147111,7 +146936,6 @@ self: { benchmarkHaskellDepends = [ base criterion semigroups ]; description = "A typeclass and set of functions for working with newtypes, with generics support"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "newtype-th" = callPackage @@ -148027,19 +147851,6 @@ self: { }) {}; "non-negative" = callPackage - ({ mkDerivation, base, QuickCheck, utility-ht }: - mkDerivation { - pname = "non-negative"; - version = "0.1.1.2"; - sha256 = "1y5ayazrbw614g61ihilm8vn468dia1cphvsxwm8s0x3iw9gljs6"; - libraryHaskellDepends = [ base QuickCheck utility-ht ]; - testHaskellDepends = [ base QuickCheck utility-ht ]; - homepage = "http://code.haskell.org/~thielema/non-negative/"; - description = "Non-negative numbers"; - license = "GPL"; - }) {}; - - "non-negative_0_1_2" = callPackage ({ mkDerivation, base, QuickCheck, semigroups, utility-ht }: mkDerivation { pname = "non-negative"; @@ -148050,7 +147861,6 @@ self: { homepage = "http://code.haskell.org/~thielema/non-negative/"; description = "Non-negative numbers"; license = "GPL"; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "nonce" = callPackage @@ -148755,27 +148565,6 @@ self: { }) {}; "numeric-prelude" = callPackage - ({ mkDerivation, array, base, containers, deepseq, non-negative - , parsec, QuickCheck, random, storable-record, utility-ht - }: - mkDerivation { - pname = "numeric-prelude"; - version = "0.4.2"; - sha256 = "1i6qavz3av3dbf70li7yqsh184bl618l1sm9s9ia15srrkzsj9sk"; - revision = "1"; - editedCabalFile = "1qpzdfy4xijb1vfiy0sxinchwg0wkfwfpjbyfvnpf4gz2j5i5gxc"; - isLibrary = true; - isExecutable = true; - libraryHaskellDepends = [ - array base containers deepseq non-negative parsec QuickCheck random - storable-record utility-ht - ]; - homepage = "http://www.haskell.org/haskellwiki/Numeric_Prelude"; - description = "An experimental alternative hierarchy of numeric type classes"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "numeric-prelude_0_4_3" = callPackage ({ mkDerivation, array, base, containers, deepseq, non-negative , parsec, QuickCheck, random, semigroups, storable-record , utility-ht @@ -148793,7 +148582,6 @@ self: { homepage = "http://www.haskell.org/haskellwiki/Numeric_Prelude"; description = "An experimental alternative hierarchy of numeric type classes"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "numeric-qq" = callPackage @@ -149282,20 +149070,27 @@ self: { "oauthenticated" = callPackage ({ mkDerivation, aeson, base, base64-bytestring, blaze-builder - , bytestring, case-insensitive, crypto-random, cryptohash, either - , exceptions, http-client, http-types, mtl, network, network-uri - , text, time, transformers + , bytestring, case-insensitive, crypto-random, cryptohash + , exceptions, hspec, hspec-expectations, http-client + , http-client-tls, http-types, mtl, network, network-uri, text + , time, transformers }: mkDerivation { pname = "oauthenticated"; - version = "0.1.3.4"; - sha256 = "1l6qir6qnipq8295cljl66mhlws2rrqjvz9nsl7rq2ldqv711bbm"; + version = "0.2.0.0"; + sha256 = "01rfx9zc1d9pwqc66axkrl2bi0jnyw4l39kn0nh4q8j63laszc1h"; libraryHaskellDepends = [ aeson base base64-bytestring blaze-builder bytestring - case-insensitive crypto-random cryptohash either exceptions - http-client http-types mtl network network-uri text time - transformers + case-insensitive crypto-random cryptohash exceptions http-client + http-types mtl network network-uri text time transformers ]; + testHaskellDepends = [ + aeson base base64-bytestring blaze-builder bytestring + case-insensitive crypto-random cryptohash exceptions hspec + hspec-expectations http-client http-client-tls http-types mtl + network network-uri text time transformers + ]; + homepage = "https://github.com/tel/oauthenticated.git#readme"; description = "Simple OAuth for http-client"; license = stdenv.lib.licenses.mit; hydraPlatforms = stdenv.lib.platforms.none; @@ -149840,6 +149635,24 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "om-elm" = callPackage + ({ mkDerivation, base, bytestring, Cabal, containers, directory + , http-types, safe, safe-exceptions, template-haskell, text, unix + , wai + }: + mkDerivation { + pname = "om-elm"; + version = "1.0.0.1"; + sha256 = "1fvpsiv5xdc7jamhdsaw2kzm32qrbg7c2b5s5zhhhcd7j4vgn3xq"; + libraryHaskellDepends = [ + base bytestring Cabal containers directory http-types safe + safe-exceptions template-haskell text unix wai + ]; + homepage = "https://github.com/owensmurray/om-elm"; + description = "Haskell utilities for building embedded Elm programs"; + license = stdenv.lib.licenses.mit; + }) {}; + "omaketex" = callPackage ({ mkDerivation, base, optparse-applicative, shakespeare-text , shelly, text @@ -151293,17 +151106,6 @@ self: { }) {}; "optional-args" = callPackage - ({ mkDerivation, base }: - mkDerivation { - pname = "optional-args"; - version = "1.0.1"; - sha256 = "16gxy78r868k8hc88hayclhdkn8chyry08fbf99ipyy1xgb081ll"; - libraryHaskellDepends = [ base ]; - description = "Optional function arguments"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "optional-args_1_0_2" = callPackage ({ mkDerivation, base }: mkDerivation { pname = "optional-args"; @@ -151312,7 +151114,6 @@ self: { libraryHaskellDepends = [ base ]; description = "Optional function arguments"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "options" = callPackage @@ -151351,8 +151152,8 @@ self: { }: mkDerivation { pname = "optparse-applicative"; - version = "0.14.0.0"; - sha256 = "06iwp1qsq0gjhnhxwyhdhldwvhlgcik6lx5jxpbb40fispyk4nxm"; + version = "0.14.1.0"; + sha256 = "19q1q1z2mrwqp6r2vp3q46qb2j1awzn7mawpjhp6rk36bhijp07f"; libraryHaskellDepends = [ ansi-wl-pprint base process transformers transformers-compat ]; @@ -151408,6 +151209,23 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "optparse-generic_1_3_0" = callPackage + ({ mkDerivation, base, bytestring, Only, optparse-applicative + , semigroups, system-filepath, text, time, transformers, void + }: + mkDerivation { + pname = "optparse-generic"; + version = "1.3.0"; + sha256 = "13rr3hq26dpmbami8vb6d1ig9ywk6jia22sp5dkp6jkfc1c9k4l0"; + libraryHaskellDepends = [ + base bytestring Only optparse-applicative semigroups + system-filepath text time transformers void + ]; + description = "Auto-generate a command-line parser for your datatype"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "optparse-helper" = callPackage ({ mkDerivation, base, optparse-applicative }: mkDerivation { @@ -154358,18 +154176,6 @@ self: { }) {}; "partial-handler" = callPackage - ({ mkDerivation, base }: - mkDerivation { - pname = "partial-handler"; - version = "1.0.2"; - sha256 = "1wd4dad207ljw4pfcx4v1qx38mbppjdjjwz17gmk2rhlyj8z5sgs"; - libraryHaskellDepends = [ base ]; - homepage = "https://github.com/nikita-volkov/partial-handler"; - description = "A composable exception handler"; - license = stdenv.lib.licenses.mit; - }) {}; - - "partial-handler_1_0_3" = callPackage ({ mkDerivation, base }: mkDerivation { pname = "partial-handler"; @@ -154379,7 +154185,6 @@ self: { homepage = "https://github.com/nikita-volkov/partial-handler"; description = "A composable exception handler"; license = stdenv.lib.licenses.mit; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "partial-isomorphisms" = callPackage @@ -154430,19 +154235,6 @@ self: { }) {}; "partial-semigroup" = callPackage - ({ mkDerivation, base, doctest, hedgehog }: - mkDerivation { - pname = "partial-semigroup"; - version = "0.3.0.2"; - sha256 = "0r2rhcq73lb18j03h5nk7j6vzv9qxjnw8zsir3zy6cynkv4w35zd"; - libraryHaskellDepends = [ base ]; - testHaskellDepends = [ base doctest hedgehog ]; - homepage = "https://github.com/chris-martin/partial-semigroup"; - description = "A partial binary associative operator"; - license = stdenv.lib.licenses.asl20; - }) {}; - - "partial-semigroup_0_3_0_3" = callPackage ({ mkDerivation, base, doctest, hedgehog }: mkDerivation { pname = "partial-semigroup"; @@ -154453,7 +154245,6 @@ self: { homepage = "https://github.com/chris-martin/partial-semigroup"; description = "A partial binary associative operator"; license = stdenv.lib.licenses.asl20; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "partial-semigroup-hedgehog" = callPackage @@ -154847,26 +154638,6 @@ self: { }) {}; "pathtype" = callPackage - ({ mkDerivation, base, deepseq, directory, old-time, QuickCheck - , random, tagged, time, transformers, utility-ht - }: - mkDerivation { - pname = "pathtype"; - version = "0.8"; - sha256 = "15vqybkblvf89v83j0ypvmgy506r804wq3mlzqghcai27k8bkqql"; - isLibrary = true; - isExecutable = true; - libraryHaskellDepends = [ - base deepseq directory old-time QuickCheck tagged time transformers - utility-ht - ]; - testHaskellDepends = [ base random ]; - homepage = "http://hub.darcs.net/thielema/pathtype/"; - description = "Type-safe replacement for System.FilePath etc"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "pathtype_0_8_1" = callPackage ({ mkDerivation, base, deepseq, directory, old-time, QuickCheck , random, semigroups, tagged, time, transformers, utility-ht }: @@ -154884,7 +154655,6 @@ self: { homepage = "http://hub.darcs.net/thielema/pathtype/"; description = "Type-safe replacement for System.FilePath etc"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "pathwalk" = callPackage @@ -157299,8 +157069,8 @@ self: { }: mkDerivation { pname = "phoityne-vscode"; - version = "0.0.21.0"; - sha256 = "190gqa5zi99a9rrazbcg2xmzx5bl304vb95w8z4qilggngq1y7df"; + version = "0.0.22.0"; + sha256 = "0ala51fps5yd1lk47blsbfby6sysnz2v39frmc53ggqzzlsls2q7"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -160131,17 +159901,6 @@ self: { }) {}; "poll" = callPackage - ({ mkDerivation, base, enumset, utility-ht }: - mkDerivation { - pname = "poll"; - version = "0.0"; - sha256 = "0v4cyrr506zqvxqbxkncss2pl2j38skl02p1vj6cjxcvlzb2y43p"; - libraryHaskellDepends = [ base enumset utility-ht ]; - description = "Bindings to poll.h"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "poll_0_0_0_1" = callPackage ({ mkDerivation, base, enumset, utility-ht }: mkDerivation { pname = "poll"; @@ -160150,7 +159909,6 @@ self: { libraryHaskellDepends = [ base enumset utility-ht ]; description = "Bindings to poll.h"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "poly-arity" = callPackage @@ -161706,8 +161464,8 @@ self: { }: mkDerivation { pname = "potoki"; - version = "0.7.2"; - sha256 = "10yl08hcfgn0l15hr6n5ga91cla050lys7jyj4w0j3s3c9k2w3gd"; + version = "0.8"; + sha256 = "00nsnbrwm62cxkx90ihdzzd8210rchgmqqcxfs90srs1awvgfd1w"; libraryHaskellDepends = [ attoparsec base base-prelude bytestring directory foldl hashable potoki-core profunctors text unagi-chan unordered-containers vector @@ -161740,15 +161498,15 @@ self: { }) {}; "potoki-core" = callPackage - ({ mkDerivation, base, deque, profunctors, QuickCheck + ({ mkDerivation, base, profunctors, QuickCheck , quickcheck-instances, rerebase, stm, tasty, tasty-hunit , tasty-quickcheck }: mkDerivation { pname = "potoki-core"; - version = "1.3"; - sha256 = "0z6ld13kmkvamn8y39zqw0z4mkg5wi9mmh7kdav31wy46im03b9l"; - libraryHaskellDepends = [ base deque profunctors stm ]; + version = "1.5"; + sha256 = "09fla5dc12pc668pxmkgp9988s1nq6cliy3kqqcwv969m6ws3imr"; + libraryHaskellDepends = [ base profunctors stm ]; testHaskellDepends = [ QuickCheck quickcheck-instances rerebase tasty tasty-hunit tasty-quickcheck @@ -162815,10 +162573,8 @@ self: { }: mkDerivation { pname = "prettyprinter-ansi-terminal"; - version = "1.1.1.1"; - sha256 = "1d3sr74c0bd1nzp0cy4ip6mk85cp1v8svh6yhggsd89r0wzkb6nl"; - revision = "1"; - editedCabalFile = "1giafm5d5yjdkm7fxf208a4scsa2z1sh73zwvfrycgrhqp746brf"; + version = "1.1.1.2"; + sha256 = "0ha6vz707qzb5ky7kdsnw2zgphg2dnxrpbrxy8gaw119vwhb9q6k"; libraryHaskellDepends = [ ansi-terminal base prettyprinter text ]; testHaskellDepends = [ base doctest ]; homepage = "http://github.com/quchen/prettyprinter"; @@ -163165,6 +162921,22 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "prints" = callPackage + ({ mkDerivation, base, hscolour, pretty-show, pretty-simple, text + , transformers + }: + mkDerivation { + pname = "prints"; + version = "0.1.0.1"; + sha256 = "09l6kvcpfjafjihcnljnhr0gi5wclbaskqh9hslig5bzldjyd331"; + libraryHaskellDepends = [ + base hscolour pretty-show pretty-simple text transformers + ]; + homepage = "https://github.com/evturn/prints"; + description = "The Artist Formerly Known as Prints"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "printxosd" = callPackage ({ mkDerivation, base, xosd }: mkDerivation { @@ -164576,23 +164348,6 @@ self: { }) {}; "protocol-buffers" = callPackage - ({ mkDerivation, array, base, binary, bytestring, containers - , directory, filepath, mtl, parsec, syb, utf8-string - }: - mkDerivation { - pname = "protocol-buffers"; - version = "2.4.6"; - sha256 = "19709wgz0vcc01hjiyxdf71v9dsz9v910l1328dixpkpjh6iqxls"; - libraryHaskellDepends = [ - array base binary bytestring containers directory filepath mtl - parsec syb utf8-string - ]; - homepage = "https://github.com/k-bx/protocol-buffers"; - description = "Parse Google Protocol Buffer specifications"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "protocol-buffers_2_4_7" = callPackage ({ mkDerivation, array, base, binary, bytestring, containers , directory, filepath, mtl, parsec, syb, utf8-string }: @@ -164607,25 +164362,9 @@ self: { homepage = "https://github.com/k-bx/protocol-buffers"; description = "Parse Google Protocol Buffer specifications"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "protocol-buffers-descriptor" = callPackage - ({ mkDerivation, base, bytestring, containers, protocol-buffers }: - mkDerivation { - pname = "protocol-buffers-descriptor"; - version = "2.4.6"; - sha256 = "1jxjahr10wfsywv4g17i6a1x775zrmmahqjd8lqzggy5axisvx79"; - enableSeparateDataOutput = true; - libraryHaskellDepends = [ - base bytestring containers protocol-buffers - ]; - homepage = "https://github.com/k-bx/protocol-buffers"; - description = "Text.DescriptorProto.Options and code generated from the Google Protocol Buffer specification"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "protocol-buffers-descriptor_2_4_7" = callPackage ({ mkDerivation, base, bytestring, containers, protocol-buffers }: mkDerivation { pname = "protocol-buffers-descriptor"; @@ -164638,7 +164377,6 @@ self: { homepage = "https://github.com/k-bx/protocol-buffers"; description = "Text.DescriptorProto.Options and code generated from the Google Protocol Buffer specification"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "protocol-buffers-descriptor-fork" = callPackage @@ -166925,15 +166663,15 @@ self: { }) {}; "quickcheck-classes" = callPackage - ({ mkDerivation, aeson, base, prim-array, primitive, QuickCheck - , transformers, vector + ({ mkDerivation, aeson, base, containers, prim-array, primitive + , QuickCheck, transformers, vector }: mkDerivation { pname = "quickcheck-classes"; - version = "0.3.2"; - sha256 = "10z65dxm0jply0zbx1kpxpiir3z85c9133hkiqnra6sqz13njdz4"; + version = "0.3.3"; + sha256 = "1czppkc56ny7nvfc11wdv96gng4vln7bkx87sgwlpdkw0q73rc14"; libraryHaskellDepends = [ - aeson base prim-array primitive QuickCheck transformers + aeson base containers prim-array primitive QuickCheck transformers ]; testHaskellDepends = [ aeson base primitive QuickCheck vector ]; homepage = "https://github.com/andrewthad/quickcheck-classes#readme"; @@ -167295,15 +167033,17 @@ self: { }) {}; "quickspec" = callPackage - ({ mkDerivation, array, base, containers, ghc-prim, QuickCheck - , random, spoon, transformers + ({ mkDerivation, base, constraints, containers, data-lens-light + , dlist, QuickCheck, random, reflection, template-haskell + , transformers, twee-lib, uglymemo }: mkDerivation { pname = "quickspec"; - version = "0.9.6"; - sha256 = "0prwzxsrvfqryl75rmma229d4y7ra61vc3d72kyqi4l44ga2ay21"; + version = "2"; + sha256 = "0hdyw114f5skc66v0n0mghcx1ax8gfgilm42h4wqkwzyj6rkiy6r"; libraryHaskellDepends = [ - array base containers ghc-prim QuickCheck random spoon transformers + base constraints containers data-lens-light dlist QuickCheck random + reflection template-haskell transformers twee-lib uglymemo ]; homepage = "https://github.com/nick8325/quickspec"; description = "Equational laws for free!"; @@ -168125,12 +167865,15 @@ self: { }) {}; "rando" = callPackage - ({ mkDerivation, base, tf-random }: + ({ mkDerivation, base, containers, microspec, tf-random, vector }: mkDerivation { pname = "rando"; - version = "0.0.0.1"; - sha256 = "09pra2w97jhayzwws8133xvjnrsb0iqzl3cx676pawnlknc1dkkg"; - libraryHaskellDepends = [ base tf-random ]; + version = "0.0.0.2"; + sha256 = "0c12z3nd9g30chlz3ylcajxjbwm868nnsnlj6xc803gyficw2vdp"; + libraryHaskellDepends = [ base tf-random vector ]; + testHaskellDepends = [ + base containers microspec tf-random vector + ]; description = "Easy-to-use randomness for livecoding"; license = stdenv.lib.licenses.gpl3; }) {}; @@ -169224,6 +168967,26 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "rc" = callPackage + ({ mkDerivation, base, dde, hmatrix, Learning, random, vector }: + mkDerivation { + pname = "rc"; + version = "0.1.0.1"; + sha256 = "0hcivi8lpf8qfsanxqhxbjyrhhkx4aa5lzwgwir0zq08fakbxadm"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + base dde hmatrix Learning random vector + ]; + executableHaskellDepends = [ + base dde hmatrix Learning random vector + ]; + testHaskellDepends = [ base dde hmatrix Learning random vector ]; + homepage = "https://github.com/masterdezign/rc#readme"; + description = "Reservoir Computing, fast RNNs"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "rclient" = callPackage ({ mkDerivation, base, binary, bytestring, data-binary-ieee754 , network, QuickCheck, split @@ -170463,6 +170226,18 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "redland" = callPackage + ({ mkDerivation, base, deepseq, raptor2, redland }: + mkDerivation { + pname = "redland"; + version = "0.2.0.1"; + sha256 = "080bp01x6vlfw116zcl75vr7pb753mn8892rkh7aqgaf8ajkhb2c"; + libraryHaskellDepends = [ base deepseq ]; + libraryPkgconfigDepends = [ raptor2 redland ]; + description = "Redland RDF library bindings"; + license = stdenv.lib.licenses.bsd3; + }) {raptor2 = null; redland = null;}; + "redo" = callPackage ({ mkDerivation, base, bytestring, containers, directory, filepath , process, pureMD5 @@ -171100,6 +170875,8 @@ self: { pname = "refresht"; version = "0.1.1.0"; sha256 = "0gv3ph1j7j9fgysldh0k6yirya6xhdlzlcwv85k18akdq13hnd87"; + revision = "2"; + editedCabalFile = "141phadslw4iy3fc60ny4qmgh6p6s53f4f81577s9ms5y4w45jhr"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base data-default exceptions lens mtl ]; @@ -174166,39 +173943,6 @@ self: { }) {}; "riak" = callPackage - ({ mkDerivation, aeson, async, attoparsec, base, bifunctors, binary - , blaze-builder, bytestring, containers, criterion - , data-default-class, deepseq, enclosed-exceptions, exceptions - , hashable, HUnit, mersenne-random-pure64, monad-control, mtl - , network, process, protocol-buffers, pureMD5, QuickCheck, random - , resource-pool, riak-protobuf, semigroups, stm, tasty, tasty-hunit - , tasty-quickcheck, template-haskell, text, time, transformers - , transformers-base, unordered-containers, vector, yaml - }: - mkDerivation { - pname = "riak"; - version = "1.1.2.3"; - sha256 = "1s1ivg8l2k7mg3qd5hvgdbqp7mhczfkrwcmsnybh1yq276hhj15n"; - libraryHaskellDepends = [ - aeson async attoparsec base bifunctors binary blaze-builder - bytestring containers data-default-class deepseq - enclosed-exceptions exceptions hashable mersenne-random-pure64 - monad-control network protocol-buffers pureMD5 random resource-pool - riak-protobuf semigroups stm text time transformers - transformers-base unordered-containers vector - ]; - testHaskellDepends = [ - aeson base bytestring containers data-default-class HUnit mtl - process QuickCheck riak-protobuf semigroups tasty tasty-hunit - tasty-quickcheck template-haskell text yaml - ]; - benchmarkHaskellDepends = [ base bytestring criterion semigroups ]; - homepage = "http://github.com/riak-haskell-client/riak-haskell-client"; - description = "A Haskell client for the Riak decentralized data store"; - license = "unknown"; - }) {}; - - "riak_1_1_2_4" = callPackage ({ mkDerivation, aeson, async, attoparsec, base, bifunctors, binary , blaze-builder, bytestring, containers, criterion , data-default-class, deepseq, enclosed-exceptions, exceptions @@ -174229,7 +173973,6 @@ self: { homepage = "http://github.com/riak-haskell-client/riak-haskell-client"; description = "A Haskell client for the Riak decentralized data store"; license = "unknown"; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "riak-protobuf" = callPackage @@ -174399,22 +174142,22 @@ self: { "rio" = callPackage ({ mkDerivation, base, bytestring, containers, deepseq, directory , exceptions, filepath, hashable, hspec, microlens, mtl, primitive - , text, time, typed-process, unix, unliftio, unordered-containers - , vector + , process, text, time, typed-process, unix, unliftio + , unordered-containers, vector }: mkDerivation { pname = "rio"; - version = "0.0.2.0"; - sha256 = "0iyfbqrgj0kcs72ibd5wm4gr51agvmqr5jg0vhay5srg86wc248l"; + version = "0.0.3.0"; + sha256 = "1mbxd2v0n0hbrmb1xh27snxxp1r8k87g4ijqsp99hnis8vmqmz84"; libraryHaskellDepends = [ base bytestring containers deepseq directory exceptions filepath - hashable microlens mtl primitive text time typed-process unix - unliftio unordered-containers vector + hashable microlens mtl primitive process text time typed-process + unix unliftio unordered-containers vector ]; testHaskellDepends = [ base bytestring containers deepseq directory exceptions filepath - hashable hspec microlens mtl primitive text time typed-process unix - unliftio unordered-containers vector + hashable hspec microlens mtl primitive process text time + typed-process unix unliftio unordered-containers vector ]; homepage = "https://github.com/commercialhaskell/rio#readme"; description = "A standard library for Haskell"; @@ -178101,8 +177844,8 @@ self: { pname = "scotty"; version = "0.11.0"; sha256 = "1vc6lc8q1cqqq67y78c70sw2jim8ps7bgp85a2gjgwfc6z4h68l9"; - revision = "8"; - editedCabalFile = "1jjpaiksvdhsmvv6p267w5grkiv4xmd59xsgwhhyhp5v2503p8sn"; + revision = "9"; + editedCabalFile = "0cdvv4qsda5rkdj93400i8n3lzkxmz9xci7i38pri9axmics28qa"; libraryHaskellDepends = [ aeson base blaze-builder bytestring case-insensitive data-default-class fail http-types monad-control mtl nats network @@ -178600,6 +178343,27 @@ self: { license = stdenv.lib.licenses.bsd3; }) {inherit (pkgs) SDL2;}; + "sdl2_2_3_0_1" = callPackage + ({ mkDerivation, base, bytestring, exceptions, linear, SDL2 + , StateVar, text, transformers, vector + }: + mkDerivation { + pname = "sdl2"; + version = "2.3.0.1"; + sha256 = "1cyp3afs89xsqn3hxzk1223vpbifr1w2faczqfkii3irdgpqjl6k"; + isLibrary = true; + isExecutable = true; + enableSeparateDataOutput = true; + libraryHaskellDepends = [ + base bytestring exceptions linear StateVar text transformers vector + ]; + librarySystemDepends = [ SDL2 ]; + libraryPkgconfigDepends = [ SDL2 ]; + description = "Both high- and low-level bindings to the SDL library (version 2.0.4+)."; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {inherit (pkgs) SDL2;}; + "sdl2-cairo" = callPackage ({ mkDerivation, base, cairo, linear, sdl2 }: mkDerivation { @@ -179391,8 +179155,8 @@ self: { pname = "semigroupoids"; version = "5.2.2"; sha256 = "17i96y4iqj8clcs090lf6k0ij3j16nj14vsfwz0mm9nd6i4gbpp4"; - revision = "1"; - editedCabalFile = "16pf83y17jbjbqv6rqlz4icdzsv6b10vjci6pf92y7cpizzjw0sy"; + revision = "2"; + editedCabalFile = "1ps5v8c9w39jbcakg4vignza5mr4cjanxwh9y0hslwpm5mhh7326"; setupHaskellDepends = [ base Cabal cabal-doctest ]; libraryHaskellDepends = [ base base-orphans bifunctors comonad containers contravariant @@ -179595,8 +179359,8 @@ self: { }: mkDerivation { pname = "sensei"; - version = "0.3.0"; - sha256 = "0ya5pb7plr3qgh2vh8yqffwcb6alk2k581wv3yfp0zwxpflwppvh"; + version = "0.4.0"; + sha256 = "18p3hrc0av30ri678rgzdarp5m3qpia0y1nc6rb8zzvs0cspmfvd"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -180051,28 +179815,29 @@ self: { "serokell-util" = callPackage ({ mkDerivation, aeson, ansi-terminal, base, base16-bytestring , base64-bytestring, bytestring, clock, containers, deepseq - , directory, exceptions, extra, filepath, formatting, hashable + , directory, exceptions, extra, filepath, fmt, formatting, hashable , hspec, hspec-discover, lens, log-warper, monad-control, mtl - , optparse-applicative, parsec, QuickCheck, quickcheck-instances - , safecopy, scientific, semigroups, stm, template-haskell, text - , text-format, time-units, transformers, universum + , o-clock, optparse-applicative, parsec, QuickCheck + , quickcheck-instances, safecopy, scientific, semigroups, stm + , template-haskell, text, text-format, transformers, universum , unordered-containers, vector, yaml }: mkDerivation { pname = "serokell-util"; - version = "0.6.0"; - sha256 = "1821f6hak3wwjradyzy2zb3pfy153l7yc39i5z2mdxn8b4vh4k88"; + version = "0.8.0"; + sha256 = "0v8vy66pbb37w7vaal42w8z0dld93j3d0bfpp3gc8mkmv12gh49p"; libraryHaskellDepends = [ aeson ansi-terminal base base16-bytestring base64-bytestring bytestring clock containers deepseq directory exceptions extra - filepath formatting hashable lens log-warper monad-control mtl - optparse-applicative parsec QuickCheck quickcheck-instances + filepath fmt formatting hashable lens log-warper monad-control mtl + o-clock optparse-applicative parsec QuickCheck quickcheck-instances scientific semigroups stm template-haskell text text-format - time-units transformers universum unordered-containers vector yaml + transformers universum unordered-containers vector yaml ]; testHaskellDepends = [ aeson base bytestring hspec QuickCheck quickcheck-instances - safecopy scientific text text-format unordered-containers vector + safecopy scientific text text-format universum unordered-containers + vector ]; testToolDepends = [ hspec-discover ]; homepage = "https://github.com/serokell/serokell-util"; @@ -180255,10 +180020,10 @@ self: { ({ mkDerivation, base }: mkDerivation { pname = "servant-auth"; - version = "0.3.0.1"; - sha256 = "1nd7wfkkwwpl7iq3d6vx2nizqsxxh5v030rjpy61phhd7jxgmbyb"; + version = "0.3.1.0"; + sha256 = "0fa8r5rwrihsadzv74npb16yfvw3lzn3faajw660n5vxz36l56ia"; libraryHaskellDepends = [ base ]; - homepage = "http://github.com/plow-technologies/servant-auth#readme"; + homepage = "http://github.com/haskell-servant/servant-auth#readme"; description = "Authentication combinators for servant"; license = stdenv.lib.licenses.bsd3; }) {}; @@ -180272,8 +180037,8 @@ self: { }: mkDerivation { pname = "servant-auth-client"; - version = "0.3.1.0"; - sha256 = "0kinczwmr32zasjb3f7csbiv865r4vz7yf6ga4j1yk857zx4zdys"; + version = "0.3.2.0"; + sha256 = "1504cdqcq6fzr8f483662xdxcp99fpsxbizva1gqk248ymrxi2i5"; libraryHaskellDepends = [ base bytestring containers servant servant-auth servant-client-core text @@ -180284,7 +180049,7 @@ self: { servant-server time transformers wai warp ]; testToolDepends = [ hspec-discover ]; - homepage = "http://github.com/plow-technologies/servant-auth#readme"; + homepage = "http://github.com/haskell-servant/servant-auth#readme"; description = "servant-client/servant-auth compatibility"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; @@ -180357,8 +180122,8 @@ self: { }: mkDerivation { pname = "servant-auth-docs"; - version = "0.2.8.0"; - sha256 = "1qw0mf3cg8iljynxd7qidxv8m6h41sygh0v6512d3gv6cgkqc5yj"; + version = "0.2.9.0"; + sha256 = "173gmbgyka6hg6hgchkaw96wv4nb7qr3qwypym520k6zi7cn8b9l"; setupHaskellDepends = [ base Cabal cabal-doctest ]; libraryHaskellDepends = [ base lens servant servant-auth servant-docs text @@ -180368,7 +180133,7 @@ self: { servant-docs template-haskell text ]; testToolDepends = [ hspec-discover ]; - homepage = "http://github.com/plow-technologies/servant-auth#readme"; + homepage = "http://github.com/haskell-servant/servant-auth#readme"; description = "servant-docs/servant-auth compatibility"; license = stdenv.lib.licenses.bsd3; }) {}; @@ -180420,8 +180185,8 @@ self: { }: mkDerivation { pname = "servant-auth-server"; - version = "0.3.1.0"; - sha256 = "1mx8yp7nabnh9ymm6sd5xrb0x8qkx075h5pz7i5fd63k2axi8kbb"; + version = "0.3.2.0"; + sha256 = "1ykjjd1lqivavsxdg8akj9vfh4miblslcwdyhlrgz2ci2f31wify"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -180441,7 +180206,7 @@ self: { wreq ]; testToolDepends = [ hspec-discover ]; - homepage = "http://github.com/plow-technologies/servant-auth#readme"; + homepage = "http://github.com/haskell-servant/servant-auth#readme"; description = "servant-server/servant-auth compatibility"; license = stdenv.lib.licenses.bsd3; }) {}; @@ -180452,8 +180217,8 @@ self: { }: mkDerivation { pname = "servant-auth-swagger"; - version = "0.2.8.0"; - sha256 = "0g2dyjj401qlpmxf0gk6lvqv5qivyxjp9r3navn0r0c9xf0b513r"; + version = "0.2.9.0"; + sha256 = "10vldaywdjshb21ifw418i68i2nnvm0l89plyk7hkf7br2qnfwjc"; libraryHaskellDepends = [ base lens servant servant-auth servant-swagger swagger2 text ]; @@ -180462,7 +180227,7 @@ self: { swagger2 text ]; testToolDepends = [ hspec-discover ]; - homepage = "http://github.com/plow-technologies/servant-auth#readme"; + homepage = "http://github.com/haskell-servant/servant-auth#readme"; description = "servant-swagger/servant-auth compatibility"; license = stdenv.lib.licenses.bsd3; }) {}; @@ -181187,30 +180952,6 @@ self: { }) {}; "servant-js" = callPackage - ({ mkDerivation, base, base-compat, charset, hspec, hspec-discover - , hspec-expectations, language-ecmascript, lens, QuickCheck - , servant, servant-foreign, text - }: - mkDerivation { - pname = "servant-js"; - version = "0.9.3.1"; - sha256 = "01an3s6xnjng7vwzha658hcf3n28v99dviindqq0qv7dbrf3r1ri"; - isLibrary = true; - isExecutable = true; - libraryHaskellDepends = [ - base base-compat charset lens servant servant-foreign text - ]; - testHaskellDepends = [ - base base-compat hspec hspec-expectations language-ecmascript lens - QuickCheck servant text - ]; - testToolDepends = [ hspec-discover ]; - homepage = "http://haskell-servant.readthedocs.org/"; - description = "Automatically derive javascript functions to query servant webservices"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "servant-js_0_9_3_2" = callPackage ({ mkDerivation, base, base-compat, charset, hspec, hspec-discover , hspec-expectations, language-ecmascript, lens, QuickCheck , servant, servant-foreign, text @@ -181232,7 +180973,6 @@ self: { homepage = "http://haskell-servant.readthedocs.org/"; description = "Automatically derive javascript functions to query servant webservices"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "servant-kotlin" = callPackage @@ -182018,34 +181758,6 @@ self: { }) {}; "servant-swagger-ui" = callPackage - ({ mkDerivation, aeson, base, base-compat, blaze-markup, bytestring - , directory, file-embed, filepath, http-media, lens, servant - , servant-blaze, servant-server, servant-swagger, swagger2 - , template-haskell, text, transformers, transformers-compat, wai - , wai-app-static, warp - }: - mkDerivation { - pname = "servant-swagger-ui"; - version = "0.2.4.3.4.0"; - sha256 = "1vb1bp7hjjyhb1p6x0j7z2ky05n72qm7zcmwgnsmnqalaxdnsvri"; - revision = "1"; - editedCabalFile = "1bd920kkwyfz4jvy57k026nqdjlxla09hb5z2rfc6y9d5qx05rfk"; - libraryHaskellDepends = [ - base blaze-markup bytestring directory file-embed filepath - http-media servant servant-blaze servant-server servant-swagger - swagger2 template-haskell text transformers transformers-compat - wai-app-static - ]; - testHaskellDepends = [ - aeson base base-compat lens servant servant-server servant-swagger - swagger2 text transformers transformers-compat wai warp - ]; - homepage = "https://github.com/phadej/servant-swagger-ui#readme"; - description = "Servant swagger ui"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "servant-swagger-ui_0_2_5_3_9_1" = callPackage ({ mkDerivation, aeson, base, base-compat, blaze-markup, bytestring , directory, file-embed, filepath, http-media, lens, servant , servant-blaze, servant-server, servant-swagger, swagger2 @@ -182069,7 +181781,6 @@ self: { homepage = "https://github.com/phadej/servant-swagger-ui#readme"; description = "Servant swagger ui"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "servant-websockets" = callPackage @@ -182252,8 +181963,8 @@ self: { }: mkDerivation { pname = "serverless-haskell"; - version = "0.4.0"; - sha256 = "12nwj81hwlqmmr4d0vgi4a5gd2zcnndn5rhkx33b0cflfrqcwyp3"; + version = "0.4.1"; + sha256 = "1r0amp80g3lz31l1hb138dyqfh29nb7f0yq20xzh4hccr600liw1"; libraryHaskellDepends = [ aeson aeson-casing amazonka-core amazonka-kinesis amazonka-s3 base bytestring lens text time unix unordered-containers @@ -182563,23 +182274,6 @@ self: { }) {}; "set-cover" = callPackage - ({ mkDerivation, base, containers, enummapset, psqueues, utility-ht - }: - mkDerivation { - pname = "set-cover"; - version = "0.0.8"; - sha256 = "1lcmx9c2bi45v01vr44fm75z3afv221psd3rsk8knkl2dqdklv8q"; - isLibrary = true; - isExecutable = true; - libraryHaskellDepends = [ - base containers enummapset psqueues utility-ht - ]; - homepage = "http://hub.darcs.net/thielema/set-cover/"; - description = "Solve exact set cover problems like Sudoku, 8 Queens, Soma Cube, Tetris Cube"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "set-cover_0_0_9" = callPackage ({ mkDerivation, base, containers, enummapset, psqueues, semigroups , utility-ht }: @@ -182595,7 +182289,6 @@ self: { homepage = "http://hub.darcs.net/thielema/set-cover/"; description = "Solve exact set cover problems like Sudoku, 8 Queens, Soma Cube, Tetris Cube"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "set-extra" = callPackage @@ -183138,8 +182831,8 @@ self: { }: mkDerivation { pname = "shake"; - version = "0.16"; - sha256 = "039b8yrp7nskya30fahzcf8w2rl8jj277hddrcfx3zwbxlcfldcg"; + version = "0.16.3"; + sha256 = "11rgb0lh8q6alr13in7156dwr44rag0ldynbd5wmlg7073q2g8zc"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -183163,48 +182856,14 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "shake_0_16_2" = callPackage - ({ mkDerivation, base, binary, bytestring, deepseq, directory - , extra, filepath, hashable, js-flot, js-jquery, primitive, process - , QuickCheck, random, time, transformers, unix - , unordered-containers, utf8-string - }: - mkDerivation { - pname = "shake"; - version = "0.16.2"; - sha256 = "07drp370pd794f0lbs2512dhkr3himndafyfngvxad6m4m6nri18"; - isLibrary = true; - isExecutable = true; - enableSeparateDataOutput = true; - libraryHaskellDepends = [ - base binary bytestring deepseq directory extra filepath hashable - js-flot js-jquery primitive process random time transformers unix - unordered-containers utf8-string - ]; - executableHaskellDepends = [ - base binary bytestring deepseq directory extra filepath hashable - js-flot js-jquery primitive process random time transformers unix - unordered-containers utf8-string - ]; - testHaskellDepends = [ - base binary bytestring deepseq directory extra filepath hashable - js-flot js-jquery primitive process QuickCheck random time - transformers unix unordered-containers utf8-string - ]; - homepage = "http://shakebuild.com"; - description = "Build system library, like Make, but more accurate dependencies"; - license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; - }) {}; - "shake-ats" = callPackage ({ mkDerivation, base, binary, dependency, directory, hs2ats , language-ats, lens, shake, shake-ext, text }: mkDerivation { pname = "shake-ats"; - version = "1.5.0.1"; - sha256 = "0gyaysqi2hxa782g34njpsjm6kpxixmqqd7v5pwna5bri9pwykmq"; + version = "1.5.0.4"; + sha256 = "19fhbwrxw5adma9d20l2wnmfcanjc7j14jyvh9c33h8scwiypjaa"; libraryHaskellDepends = [ base binary dependency directory hs2ats language-ats lens shake shake-ext text @@ -183949,8 +183608,8 @@ self: { }: mkDerivation { pname = "shimmer"; - version = "0.1.1"; - sha256 = "10n9dq9445anb2n85xasl1l8qx40p5bnm12xj47n6wbmxhd75fvh"; + version = "0.1.2"; + sha256 = "0d4jllvqkswhxmjczvj2pcfwgdsd8xpvjx60pvw7m06jwslh99dl"; libraryHaskellDepends = [ base bytestring containers filepath haskeline text vector ]; @@ -184119,6 +183778,19 @@ self: { license = "GPL"; }) {}; + "show-combinators" = callPackage + ({ mkDerivation, base }: + mkDerivation { + pname = "show-combinators"; + version = "0.1.0.0"; + sha256 = "11ihjlpa5hgqhcbwcyclldgddppzgdqsz8hx1hqvamchqx3mgi12"; + libraryHaskellDepends = [ base ]; + testHaskellDepends = [ base ]; + homepage = "https://github.com/Lysxia/show-combinators#readme"; + description = "Combinators to write Show instances"; + license = stdenv.lib.licenses.mit; + }) {}; + "show-please" = callPackage ({ mkDerivation, base, mtl, parsec, template-haskell, th-orphans , time @@ -184141,10 +183813,8 @@ self: { }: mkDerivation { pname = "show-prettyprint"; - version = "0.2"; - sha256 = "14yjffqjkadmb0aw3zf2n1v525vn293rinhmbwby71ch76nij42w"; - revision = "1"; - editedCabalFile = "1hkfq59kpx3p4rgka49l3hvim80xlqf5h3q8f1xb4arysrq3pvi4"; + version = "0.2.0.1"; + sha256 = "0nkp1qjm017j3pmih9qnymi361wq1f45vr2pqi6y3wbspi0gq029"; libraryHaskellDepends = [ ansi-wl-pprint base prettyprinter trifecta ]; @@ -185234,21 +184904,18 @@ self: { }) {}; "simple-vec3" = callPackage - ({ mkDerivation, base, criterion, QuickCheck, tasty - , tasty-quickcheck, tasty-th, vector, vector-th-unbox + ({ mkDerivation, base, criterion, doctest, doctest-discover + , QuickCheck, tasty, tasty-quickcheck, vector }: mkDerivation { pname = "simple-vec3"; - version = "0.3.1"; - sha256 = "0csmwaqb3slvh0bqlh2pcjvl5rswaq92lx5d8glzznn0chxnpns4"; - libraryHaskellDepends = [ base QuickCheck vector vector-th-unbox ]; + version = "0.4"; + sha256 = "13qlnpjl5n6rpvhgn0pdnljx0g7nvjk2xr4mds3nvd93d9ciqcxl"; + libraryHaskellDepends = [ base QuickCheck vector ]; testHaskellDepends = [ - base QuickCheck tasty tasty-quickcheck tasty-th vector - vector-th-unbox - ]; - benchmarkHaskellDepends = [ - base criterion QuickCheck vector vector-th-unbox + base doctest doctest-discover tasty tasty-quickcheck ]; + benchmarkHaskellDepends = [ base criterion vector ]; homepage = "https://github.com/dzhus/simple-vec3#readme"; description = "Three-dimensional vectors of doubles with basic operations"; license = stdenv.lib.licenses.bsd3; @@ -185528,20 +185195,6 @@ self: { }) {inherit (pkgs.xorg) libXft;}; "singleton-bool" = callPackage - ({ mkDerivation, base }: - mkDerivation { - pname = "singleton-bool"; - version = "0.1.2.0"; - sha256 = "17a49mka1h7cd5jmgd3wm0dr45pwmc5i76xjaq7jcqsk193d1frk"; - revision = "1"; - editedCabalFile = "13x8chqhrlmrsca0018p7z5by3przlr9921yhjc072c8433br586"; - libraryHaskellDepends = [ base ]; - homepage = "https://github.com/phadej/singleton-bool#readme"; - description = "Type level booleans"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "singleton-bool_0_1_3" = callPackage ({ mkDerivation, base }: mkDerivation { pname = "singleton-bool"; @@ -185551,7 +185204,6 @@ self: { homepage = "https://github.com/phadej/singleton-bool#readme"; description = "Type level booleans"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "singleton-dict" = callPackage @@ -186277,21 +185929,27 @@ self: { }) {}; "slate" = callPackage - ({ mkDerivation, base, directory, filepath, optparse-applicative }: + ({ mkDerivation, base, directory, filepath, htoml + , optparse-applicative, process, string-conversions + , unordered-containers + }: mkDerivation { pname = "slate"; - version = "0.4.0.0"; - sha256 = "0j2n2wix01ildnpy6k289j5dlf9i7zbi1yd4k5hdvamwlvibqzjl"; + version = "0.8.0.0"; + sha256 = "096v0aai5c7adpa5y15yscs6w8c7c0vz667a0ibr33m0rmnyiqlm"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - base directory filepath optparse-applicative + base directory filepath htoml optparse-applicative process + string-conversions unordered-containers ]; executableHaskellDepends = [ - base directory filepath optparse-applicative + base directory filepath htoml optparse-applicative process + string-conversions unordered-containers ]; testHaskellDepends = [ - base directory filepath optparse-applicative + base directory filepath htoml optparse-applicative process + string-conversions unordered-containers ]; homepage = "https://github.com/evuez/slate#readme"; description = "A note taking CLI tool"; @@ -189156,24 +188814,6 @@ self: { }) {}; "sox" = callPackage - ({ mkDerivation, base, containers, explicit-exception - , extensible-exceptions, process, sample-frame, transformers, unix - , utility-ht - }: - mkDerivation { - pname = "sox"; - version = "0.2.2.7"; - sha256 = "1z6jqrn7n66583pf5gafblh50j82s72w1mx31rj0ii8x70lggkbx"; - libraryHaskellDepends = [ - base containers explicit-exception extensible-exceptions process - sample-frame transformers unix utility-ht - ]; - homepage = "http://www.haskell.org/haskellwiki/Sox"; - description = "Play, write, read, convert audio signals using Sox"; - license = "GPL"; - }) {}; - - "sox_0_2_3" = callPackage ({ mkDerivation, base, containers, explicit-exception , extensible-exceptions, process, sample-frame, semigroups , transformers, unix, utility-ht @@ -189189,7 +188829,6 @@ self: { homepage = "http://www.haskell.org/haskellwiki/Sox"; description = "Play, write, read, convert audio signals using Sox"; license = "GPL"; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "soxlib" = callPackage @@ -189438,29 +189077,6 @@ self: { }) {}; "sparse-linear-algebra" = callPackage - ({ mkDerivation, base, containers, exceptions, hspec - , matrix-market-attoparsec, mtl, mwc-random, primitive, QuickCheck - , scientific, transformers, vector, vector-algorithms - }: - mkDerivation { - pname = "sparse-linear-algebra"; - version = "0.2.9.8"; - sha256 = "19rhcnrlx6nf4yidb119wd3mm4xb5ls99wqk7vdif0cxlpnsycch"; - enableSeparateDataOutput = true; - libraryHaskellDepends = [ - base containers exceptions hspec mtl primitive QuickCheck - transformers vector vector-algorithms - ]; - testHaskellDepends = [ - base containers exceptions hspec matrix-market-attoparsec mtl - mwc-random primitive QuickCheck scientific - ]; - homepage = "https://github.com/ocramz/sparse-linear-algebra"; - description = "Numerical computation in native Haskell"; - license = stdenv.lib.licenses.gpl3; - }) {}; - - "sparse-linear-algebra_0_2_9_9" = callPackage ({ mkDerivation, base, containers, exceptions, hspec , matrix-market-attoparsec, mtl, mwc-random, primitive, QuickCheck , scientific, transformers, vector, vector-algorithms @@ -189481,7 +189097,6 @@ self: { homepage = "https://github.com/ocramz/sparse-linear-algebra"; description = "Numerical computing in native Haskell"; license = stdenv.lib.licenses.gpl3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "sparsebit" = callPackage @@ -191846,6 +191461,18 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "starter" = callPackage + ({ mkDerivation, base, fsnotify }: + mkDerivation { + pname = "starter"; + version = "0.1.0"; + sha256 = "1h3c9znrzyymd1bcgwhid6rchf9ai7nxr1ib0y70qzzrmifyh1mn"; + libraryHaskellDepends = [ base fsnotify ]; + homepage = "https://github.com/rkaippully/starter#readme"; + description = "Develop applications without restarts"; + license = stdenv.lib.licenses.mpl20; + }) {}; + "stash" = callPackage ({ mkDerivation, aeson, attoparsec, base, bytestring, directory , hashable, text, vector @@ -193054,20 +192681,6 @@ self: { }) {}; "storable-record" = callPackage - ({ mkDerivation, base, transformers, utility-ht }: - mkDerivation { - pname = "storable-record"; - version = "0.0.3.1"; - sha256 = "1fmdzngikc8bi8bfk04bdd046j3i3v99g5bm2dfn5dz097pcxrbl"; - isLibrary = true; - isExecutable = true; - libraryHaskellDepends = [ base transformers utility-ht ]; - homepage = "http://code.haskell.org/~thielema/storable-record/"; - description = "Elegant definition of Storable instances for records"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "storable-record_0_0_4" = callPackage ({ mkDerivation, base, semigroups, transformers, utility-ht }: mkDerivation { pname = "storable-record"; @@ -193081,7 +192694,6 @@ self: { homepage = "http://code.haskell.org/~thielema/storable-record/"; description = "Elegant definition of Storable instances for records"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "storable-static-array" = callPackage @@ -193111,30 +192723,6 @@ self: { }) {}; "storablevector" = callPackage - ({ mkDerivation, base, bytestring, deepseq, non-negative - , QuickCheck, random, sample-frame, syb, transformers, unsafe - , utility-ht - }: - mkDerivation { - pname = "storablevector"; - version = "0.2.12.1"; - sha256 = "0y855kfwksrxspd18ppj7x1zyhbi3ackf4p01wsjal84b8ml1qd2"; - libraryHaskellDepends = [ - base deepseq non-negative QuickCheck syb transformers unsafe - utility-ht - ]; - testHaskellDepends = [ - base bytestring QuickCheck random utility-ht - ]; - benchmarkHaskellDepends = [ - base deepseq sample-frame unsafe utility-ht - ]; - homepage = "http://www.haskell.org/haskellwiki/Storable_Vector"; - description = "Fast, packed, strict storable arrays with a list interface like ByteString"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "storablevector_0_2_13" = callPackage ({ mkDerivation, base, bytestring, deepseq, non-negative , QuickCheck, random, sample-frame, semigroups, syb, transformers , unsafe, utility-ht @@ -193156,7 +192744,6 @@ self: { homepage = "http://www.haskell.org/haskellwiki/Storable_Vector"; description = "Fast, packed, strict storable arrays with a list interface like ByteString"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "storablevector-carray" = callPackage @@ -193298,15 +192885,15 @@ self: { license = stdenv.lib.licenses.mit; }) {}; - "stratosphere_0_15_2" = callPackage + "stratosphere_0_16_0" = callPackage ({ mkDerivation, aeson, aeson-pretty, base, bytestring, containers , hashable, hspec, hspec-discover, lens, template-haskell, text , unordered-containers }: mkDerivation { pname = "stratosphere"; - version = "0.15.2"; - sha256 = "00mna9w4021a1ydxyysx0wd333hby4sx3fpl1vygmcyjfibwiqmc"; + version = "0.16.0"; + sha256 = "0rdgp362g0i56kgia8gc9had6mpsh33gal2zscnqapv0nk00hgbs"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -193705,6 +193292,23 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "streaming-pcap" = callPackage + ({ mkDerivation, base, bytestring, pcap, streaming, tasty + , tasty-hunit + }: + mkDerivation { + pname = "streaming-pcap"; + version = "1.0.0"; + sha256 = "0xf7a9jpyhypfkjby2mqjv6fc4dhsl420q482nppdw7k65nsi85x"; + libraryHaskellDepends = [ base bytestring pcap streaming ]; + testHaskellDepends = [ + base bytestring pcap streaming tasty tasty-hunit + ]; + homepage = "https://github.com/fosskers/streaming-pcap"; + description = "Stream packets via libpcap"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "streaming-png" = callPackage ({ mkDerivation, base, bytestring, cereal, exceptions, JuicyPixels , mmorph, mtl, resourcet, streaming, streaming-bytestring @@ -194113,18 +193717,6 @@ self: { }) {}; "string-class" = callPackage - ({ mkDerivation, base, bytestring, tagged, text }: - mkDerivation { - pname = "string-class"; - version = "0.1.6.5"; - sha256 = "0yi3fagwqkgr8pf6wnl360qikyvfb649qs2y6gp0n7jjw0zc27c2"; - libraryHaskellDepends = [ base bytestring tagged text ]; - homepage = "https://github.com/bairyn/string-class"; - description = "String class library"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "string-class_0_1_7_0" = callPackage ({ mkDerivation, base, bytestring, tagged, text }: mkDerivation { pname = "string-class"; @@ -194134,7 +193726,6 @@ self: { homepage = "https://github.com/string-class/string-class"; description = "String class library"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "string-combinators" = callPackage @@ -194337,18 +193928,6 @@ self: { }) {}; "stringbuilder" = callPackage - ({ mkDerivation, base, hspec, QuickCheck }: - mkDerivation { - pname = "stringbuilder"; - version = "0.5.0"; - sha256 = "1ap95xphqnrhv64c2a137wqslkdmb2jjd9ldb17gs1pw48k8hrl9"; - libraryHaskellDepends = [ base ]; - testHaskellDepends = [ base hspec QuickCheck ]; - description = "A writer monad for multi-line string literals"; - license = stdenv.lib.licenses.mit; - }) {}; - - "stringbuilder_0_5_1" = callPackage ({ mkDerivation, base, hspec, QuickCheck }: mkDerivation { pname = "stringbuilder"; @@ -194358,7 +193937,6 @@ self: { testHaskellDepends = [ base hspec QuickCheck ]; description = "A writer monad for multi-line string literals"; license = stdenv.lib.licenses.mit; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "stringlike" = callPackage @@ -194916,8 +194494,8 @@ self: { }: mkDerivation { pname = "stylish-cabal"; - version = "0.1.0.0"; - sha256 = "131qvb6cdfmxzxvz3mxxnapc5826ybxs62zz439cjz29n1r6p0bd"; + version = "0.2.0.0"; + sha256 = "1ldnr0bpl0iaflng2715j02wfk8ksigzms15v7118860wyw2mvyi"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -195693,6 +195271,18 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "surjective" = callPackage + ({ mkDerivation, base, lens, mtl, template-haskell }: + mkDerivation { + pname = "surjective"; + version = "0.1.0.0"; + sha256 = "1nhq7lfzsbh9ra1m1n7649q35ch6l1lgm110p1qbxgvv6w6xmz41"; + libraryHaskellDepends = [ base lens mtl template-haskell ]; + homepage = "https://github.com/gelisam/surjective"; + description = "An output coverage checker"; + license = stdenv.lib.licenses.publicDomain; + }) {}; + "suspend" = callPackage ({ mkDerivation, base, lifted-base, transformers-base }: mkDerivation { @@ -197025,13 +196615,16 @@ self: { }) {}; "system-filepath" = callPackage - ({ mkDerivation, base, bytestring, chell, chell-quickcheck, deepseq - , QuickCheck, text + ({ mkDerivation, base, bytestring, Cabal, chell, chell-quickcheck + , deepseq, QuickCheck, text }: mkDerivation { pname = "system-filepath"; version = "0.4.14"; sha256 = "14yras4pz2dh55xpwmazcgxijvi8913pjgzb9iw50mjq1lycwmhn"; + revision = "1"; + editedCabalFile = "18llfvisghrn9w9yfgacqn51gs50a0lngah3bmg852h0swj7vkp8"; + setupHaskellDepends = [ base Cabal ]; libraryHaskellDepends = [ base bytestring deepseq text ]; testHaskellDepends = [ base bytestring chell chell-quickcheck QuickCheck text @@ -197057,8 +196650,8 @@ self: { ({ mkDerivation, attoparsec, base, process, text }: mkDerivation { pname = "system-info"; - version = "0.3.0.0"; - sha256 = "05zp1kddydl9fqbhfpkjvxqfi6l9i1qhif5sziz3d0mymnyrzvpp"; + version = "0.4.0.0"; + sha256 = "1sl1m19ia5n8rws49596lipjzx5q3jn9yjqhjlfs4vvh9rc2dnkh"; libraryHaskellDepends = [ attoparsec base process text ]; testHaskellDepends = [ base ]; homepage = "https://github.com/ChaosGroup/system-info"; @@ -197550,6 +197143,20 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "tabs" = callPackage + ({ mkDerivation, base, filepath, monadlist, mtl, tagged }: + mkDerivation { + pname = "tabs"; + version = "0.1.0.0"; + sha256 = "1188rjlq2s2azbjxwfp40j8aidn3hz2lhmcaghj2ig6n5w2jpg98"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ base filepath monadlist mtl tagged ]; + executableHaskellDepends = [ base filepath monadlist mtl tagged ]; + description = "Indents source files"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "tabular" = callPackage ({ mkDerivation, base, csv, html, mtl }: mkDerivation { @@ -198567,12 +198174,12 @@ self: { license = stdenv.lib.licenses.mit; }) {}; - "tasty-dejafu_1_0_1_0" = callPackage + "tasty-dejafu_1_0_1_1" = callPackage ({ mkDerivation, base, dejafu, random, tagged, tasty }: mkDerivation { pname = "tasty-dejafu"; - version = "1.0.1.0"; - sha256 = "1japzchg9sxy08rjj9vvr3qxil1bzhn3i3qxr00pf0qpxnd5ssmc"; + version = "1.0.1.1"; + sha256 = "0khdm4v22n86vz3qgv9wi6yfd3yi61br089sxffhfwvr9g3fxjlf"; libraryHaskellDepends = [ base dejafu random tagged tasty ]; homepage = "https://github.com/barrucadu/dejafu"; description = "Deja Fu support for the Tasty test framework"; @@ -198607,6 +198214,34 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "tasty-discover_4_1_4" = callPackage + ({ mkDerivation, base, containers, directory, filepath, Glob + , hedgehog, tasty, tasty-hedgehog, tasty-hspec, tasty-hunit + , tasty-quickcheck, tasty-smallcheck + }: + mkDerivation { + pname = "tasty-discover"; + version = "4.1.4"; + sha256 = "1785i3jqc7qkc021zk6yzvkkbpm66s6b4mhyfsyasm2sslpgvwp2"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + base containers directory filepath Glob + ]; + executableHaskellDepends = [ + base containers directory filepath Glob + ]; + testHaskellDepends = [ + base containers directory filepath Glob hedgehog tasty + tasty-hedgehog tasty-hspec tasty-hunit tasty-quickcheck + tasty-smallcheck + ]; + homepage = "https://github.com/lwm/tasty-discover#readme"; + description = "Test discovery for the tasty framework"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "tasty-expected-failure" = callPackage ({ mkDerivation, base, tagged, tasty }: mkDerivation { @@ -198701,25 +198336,6 @@ self: { }) {}; "tasty-hedgehog" = callPackage - ({ mkDerivation, base, hedgehog, tagged, tasty - , tasty-expected-failure - }: - mkDerivation { - pname = "tasty-hedgehog"; - version = "0.1.0.1"; - sha256 = "1sqwj5vzmc2rcr8yh2pqwmkdr11cwf20fv5z4wr5xsp9qnv3bzl1"; - revision = "1"; - editedCabalFile = "1aq46lrx467r3c6i8figzgyhwkg1n34zq9r39j6144mmmmgh2wpz"; - libraryHaskellDepends = [ base hedgehog tagged tasty ]; - testHaskellDepends = [ - base hedgehog tasty tasty-expected-failure - ]; - homepage = "https://github.com/qfpl/tasty-hedgehog"; - description = "Integrates the hedgehog testing library with the tasty testing framework"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "tasty-hedgehog_0_1_0_2" = callPackage ({ mkDerivation, base, hedgehog, tagged, tasty , tasty-expected-failure }: @@ -198734,7 +198350,6 @@ self: { homepage = "https://github.com/qfpl/tasty-hedghog"; description = "Integrates the hedgehog testing library with the tasty testing framework"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "tasty-hspec" = callPackage @@ -201869,16 +201484,16 @@ self: { }) {}; "text1" = callPackage - ({ mkDerivation, base, binary, directory, doctest, filepath, lens - , papa, QuickCheck, semigroups, template-haskell, text + ({ mkDerivation, base, binary, HUnit, lens, QuickCheck, semigroups + , text }: mkDerivation { pname = "text1"; - version = "0.0.5"; - sha256 = "16rz92gvpn1gji6bknilklw397rr118rsdqxysk9wmj10alsxqsp"; - libraryHaskellDepends = [ base binary lens papa semigroups text ]; + version = "0.0.6"; + sha256 = "105y6dbmc3bdbh02v5m6bjsm932d68i262csii1n8kls6rggnfy2"; + libraryHaskellDepends = [ base binary lens semigroups text ]; testHaskellDepends = [ - base directory doctest filepath QuickCheck template-haskell + base HUnit lens QuickCheck semigroups text ]; homepage = "https://github.com/qfpl/text1"; description = "Non-empty values of `Data.Text`."; @@ -202056,6 +201671,8 @@ self: { pname = "th-abstraction"; version = "0.2.6.0"; sha256 = "0g42h6wnj2awc5ryhbvx009wd8w75pn66bjzsq1z4s3xajd2hbp5"; + revision = "1"; + editedCabalFile = "0k4s4nbg9jlgaza38842jnzs8s01ig85fzmjgd10k9hl02gc3r44"; libraryHaskellDepends = [ base containers ghc-prim template-haskell ]; @@ -202990,8 +202607,8 @@ self: { }: mkDerivation { pname = "threepenny-gui"; - version = "0.8.2.0"; - sha256 = "1qmvrkha68f30kdv8hvdkj25sgsski7rnd6dqmvbhqrn6fpsqm8r"; + version = "0.8.2.1"; + sha256 = "0ky9nsrihiqbg1sizz7yhrif672l1gr5p4nqn9lxcchlf4d2hyl2"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -203006,7 +202623,7 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "threepenny-gui_0_8_2_1" = callPackage + "threepenny-gui_0_8_2_2" = callPackage ({ mkDerivation, aeson, async, base, bytestring, containers , data-default, deepseq, exceptions, file-embed, filepath, hashable , network-uri, safe, snap-core, snap-server, stm, template-haskell @@ -203015,8 +202632,8 @@ self: { }: mkDerivation { pname = "threepenny-gui"; - version = "0.8.2.1"; - sha256 = "0ky9nsrihiqbg1sizz7yhrif672l1gr5p4nqn9lxcchlf4d2hyl2"; + version = "0.8.2.2"; + sha256 = "13s6n7pxbmr0j2g5xiqpacfnshqg0jq91y161rmmp3wix4bav6am"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -205812,6 +205429,24 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "transformers-compat_0_6_0_6" = callPackage + ({ mkDerivation, base, deriving-compat, ghc-prim, hspec, QuickCheck + , tagged, transformers + }: + mkDerivation { + pname = "transformers-compat"; + version = "0.6.0.6"; + sha256 = "0fdnc8qnm42llp3nyfmg7ij6wscrigb43x3f2w1d38dvjkycyags"; + libraryHaskellDepends = [ base ghc-prim transformers ]; + testHaskellDepends = [ + base deriving-compat hspec QuickCheck tagged transformers + ]; + homepage = "http://github.com/ekmett/transformers-compat/"; + description = "A small compatibility shim for the transformers library"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "transformers-compose" = callPackage ({ mkDerivation, base, transformers }: mkDerivation { @@ -207357,8 +206992,8 @@ self: { }: mkDerivation { pname = "twee"; - version = "2.1.1"; - sha256 = "08mhq7yr66hgs6p01wx935xr59pm427qxyz8qd9f00lbgkhjbvzc"; + version = "2.1.2"; + sha256 = "0i57wva87yh31j0wp3a041jskn3panjy6lh97013d251rcrll8jf"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -207376,8 +207011,8 @@ self: { }: mkDerivation { pname = "twee-lib"; - version = "2.1.1"; - sha256 = "00c9qwx27qsljpvvywljssncw805qd2aq8vwcyqqawjcpbyrxf0d"; + version = "2.1.2"; + sha256 = "0mvyzssazd8dggsdq8qpqn3l94970wvshxz99bhyifyfasabwm5h"; libraryHaskellDepends = [ base containers dlist ghc-prim pretty primitive transformers vector ]; @@ -209062,28 +208697,6 @@ self: { }) {}; "tzdata" = callPackage - ({ mkDerivation, base, bytestring, containers, deepseq, HUnit - , test-framework, test-framework-hunit, test-framework-th, unix - , vector - }: - mkDerivation { - pname = "tzdata"; - version = "0.1.20170320.0"; - sha256 = "11ffj8ipcvvsm811w1jm23ry7vrmvj2q487640ic4ghq39dx91is"; - enableSeparateDataOutput = true; - libraryHaskellDepends = [ - base bytestring containers deepseq vector - ]; - testHaskellDepends = [ - base bytestring HUnit test-framework test-framework-hunit - test-framework-th unix - ]; - homepage = "https://github.com/nilcons/haskell-tzdata"; - description = "Time zone database (as files and as a module)"; - license = stdenv.lib.licenses.asl20; - }) {}; - - "tzdata_0_1_20180122_0" = callPackage ({ mkDerivation, base, bytestring, containers, deepseq, HUnit , test-framework, test-framework-hunit, test-framework-th, unix , vector @@ -209103,7 +208716,6 @@ self: { homepage = "https://github.com/nilcons/haskell-tzdata"; description = "Time zone database (as files and as a module)"; license = stdenv.lib.licenses.asl20; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "u2f" = callPackage @@ -209882,21 +209494,6 @@ self: { }) {}; "unicode" = callPackage - ({ mkDerivation, base, containers, utility-ht }: - mkDerivation { - pname = "unicode"; - version = "0.0"; - sha256 = "0fy89j864dy5dzfj15aavm8bqpv2f51zf42dyjvs50qah3shh5yl"; - isLibrary = true; - isExecutable = true; - libraryHaskellDepends = [ base containers ]; - testHaskellDepends = [ base containers utility-ht ]; - homepage = "http://code.haskell.org/~thielema/unicode/"; - description = "Construct and transform unicode characters"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "unicode_0_0_1" = callPackage ({ mkDerivation, base, containers, semigroups, utility-ht }: mkDerivation { pname = "unicode"; @@ -209909,7 +209506,6 @@ self: { homepage = "http://hub.darcs.net/thielema/unicode/"; description = "Construct and transform unicode characters"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "unicode-names" = callPackage @@ -210570,21 +210166,26 @@ self: { license = stdenv.lib.licenses.mit; }) {}; - "universum_1_0_1" = callPackage + "universum_1_1_0" = callPackage ({ mkDerivation, base, bytestring, containers, criterion, deepseq - , ghc-prim, hashable, microlens, microlens-mtl, mtl - , safe-exceptions, semigroups, stm, text, text-format, transformers - , type-operators, unordered-containers, utf8-string, vector + , doctest, ghc-prim, Glob, hashable, hedgehog, microlens + , microlens-mtl, mtl, safe-exceptions, semigroups, stm, tasty + , tasty-hedgehog, text, text-format, transformers, type-operators + , unordered-containers, utf8-string, vector }: mkDerivation { pname = "universum"; - version = "1.0.1"; - sha256 = "1pa8qnr9px5qfwhpxj15wnqaf5x063ih87mx78fcks95xaqf648k"; + version = "1.1.0"; + sha256 = "0k1gk9dba9f7w852m6y46gq1md3z0w29bgv4qy7xp3pk16h3axhp"; libraryHaskellDepends = [ base bytestring containers deepseq ghc-prim hashable microlens microlens-mtl mtl safe-exceptions stm text text-format transformers type-operators unordered-containers utf8-string vector ]; + testHaskellDepends = [ + base bytestring doctest Glob hedgehog tasty tasty-hedgehog text + utf8-string + ]; benchmarkHaskellDepends = [ base containers criterion deepseq hashable mtl semigroups text unordered-containers @@ -210746,8 +210347,8 @@ self: { }: mkDerivation { pname = "unjson"; - version = "0.14.1.3"; - sha256 = "18aclqjyqj7428yyal9hj32r290ipd77lnaf176sn8fk42gk5qj3"; + version = "0.15.0.0"; + sha256 = "0ib7y7a4ham90hzy5anrhry7c1w8c847v39ygjj8556pq6j47nyg"; libraryHaskellDepends = [ aeson attoparsec base bytestring containers free hashable invariant pretty primitive scientific text time unordered-containers vector @@ -212222,6 +211823,8 @@ self: { pname = "uuid-crypto"; version = "1.4.0.0"; sha256 = "191da0bdgzbpibh7v2n2cg13gkq2vchsybad0qy9qixk0rzi1cvn"; + revision = "2"; + editedCabalFile = "0kw54wnzzxw6hjmj52735x9pya18ccmry2nf4nmlcv89ipb1vmly"; libraryHaskellDepends = [ base binary bytestring cryptoids cryptoids-class cryptoids-types exceptions uuid @@ -212559,15 +212162,15 @@ self: { }) {}; "validation" = callPackage - ({ mkDerivation, base, bifunctors, hedgehog, HUnit, lens, mtl - , semigroupoids, semigroups, transformers + ({ mkDerivation, base, bifunctors, deepseq, hedgehog, HUnit, lens + , semigroupoids, semigroups }: mkDerivation { pname = "validation"; - version = "0.6.2"; - sha256 = "0631g3ffxchgg6hpy8w94a3713plgqp1k45zq85vaxyjg2x5bh7r"; + version = "0.6.3"; + sha256 = "07j4nxah790vbzn0jfkp9lgb4afr8zwi06a0xp5dw0xjdl0qja66"; libraryHaskellDepends = [ - base bifunctors lens mtl semigroupoids semigroups transformers + base bifunctors deepseq lens semigroupoids semigroups ]; testHaskellDepends = [ base hedgehog HUnit lens semigroups ]; homepage = "https://github.com/qfpl/validation"; @@ -212617,18 +212220,6 @@ self: { }) {}; "validity" = callPackage - ({ mkDerivation, base }: - mkDerivation { - pname = "validity"; - version = "0.4.0.3"; - sha256 = "15vp8qd3fvarwd58i69if87kyc7fmf26qgrvacwnis3xwav9nyvs"; - libraryHaskellDepends = [ base ]; - homepage = "https://github.com/NorfairKing/validity#readme"; - description = "Validity typeclass"; - license = stdenv.lib.licenses.mit; - }) {}; - - "validity_0_4_0_4" = callPackage ({ mkDerivation, base }: mkDerivation { pname = "validity"; @@ -212638,7 +212229,6 @@ self: { homepage = "https://github.com/NorfairKing/validity#readme"; description = "Validity typeclass"; license = stdenv.lib.licenses.mit; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "validity-aeson" = callPackage @@ -212707,18 +212297,6 @@ self: { }) {}; "validity-text" = callPackage - ({ mkDerivation, base, bytestring, text, validity }: - mkDerivation { - pname = "validity-text"; - version = "0.2.0.0"; - sha256 = "1h123s8hbsimd3l05s217lncimfhzvy4xmwqafl4qw9dbmcxnsah"; - libraryHaskellDepends = [ base bytestring text validity ]; - homepage = "https://github.com/NorfairKing/validity#readme"; - description = "Validity instances for text"; - license = stdenv.lib.licenses.mit; - }) {}; - - "validity-text_0_2_0_1" = callPackage ({ mkDerivation, base, bytestring, text, validity }: mkDerivation { pname = "validity-text"; @@ -212728,7 +212306,6 @@ self: { homepage = "https://github.com/NorfairKing/validity#readme"; description = "Validity instances for text"; license = stdenv.lib.licenses.mit; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "validity-time" = callPackage @@ -212932,21 +212509,6 @@ self: { }) {}; "vault" = callPackage - ({ mkDerivation, base, containers, hashable, unordered-containers - }: - mkDerivation { - pname = "vault"; - version = "0.3.0.7"; - sha256 = "1w36ldr5iv0yiqbvibm7b1c66hf1ps5rbassz348zmi113d8k4cy"; - libraryHaskellDepends = [ - base containers hashable unordered-containers - ]; - homepage = "https://github.com/HeinrichApfelmus/vault"; - description = "a persistent store for values of arbitrary types"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "vault_0_3_1_0" = callPackage ({ mkDerivation, base, containers, hashable, semigroups , unordered-containers }: @@ -212960,7 +212522,6 @@ self: { homepage = "https://github.com/HeinrichApfelmus/vault"; description = "a persistent store for values of arbitrary types"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "vault-tool" = callPackage @@ -214726,6 +214287,19 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {vulkan = null;}; + "vulkan-api" = callPackage + ({ mkDerivation, base, ghc-prim, vulkan }: + mkDerivation { + pname = "vulkan-api"; + version = "0.1.0.1"; + sha256 = "192bid9aqndn7lh3vdvk2mhqc76z5fw2z4v362n2bjhdaadwipld"; + libraryHaskellDepends = [ base ghc-prim ]; + librarySystemDepends = [ vulkan ]; + homepage = "https://github.com/achirkin/genvulkan#readme"; + description = "Low-level low-overhead vulkan api bindings"; + license = stdenv.lib.licenses.bsd3; + }) {vulkan = null;}; + "wacom-daemon" = callPackage ({ mkDerivation, aeson, base, bytestring, containers, directory , filepath, Glob, libnotify, process, select, text, udev @@ -215833,8 +215407,8 @@ self: { }: mkDerivation { pname = "wai-middleware-rollbar"; - version = "0.8.3"; - sha256 = "17ys7ddpfa0sbjh79k240zqk2v7nlh0v7hrgr7kanal3pk7mvwvm"; + version = "0.8.4"; + sha256 = "1yycbkcc7jq8mlv6jslnq2j0w8yhv4859fds34pg2k1fg7ccb1iw"; libraryHaskellDepends = [ aeson base bytestring case-insensitive hostname http-client http-conduit http-types network text time unordered-containers uuid @@ -217558,8 +217132,8 @@ self: { }: mkDerivation { pname = "webify"; - version = "0.1.8.0"; - sha256 = "031gim7g15ssjj3pzc5nk7r8dsfj35pf3kzjzaxfijklwzj0zj9q"; + version = "0.1.9.0"; + sha256 = "0gfdzxy7qsxpqqrkm3dy37d68xp8nvx0q9189msbfp3x4yalfb1z"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -217869,8 +217443,8 @@ self: { }: mkDerivation { pname = "weeder"; - version = "1.0"; - sha256 = "1s6xfzv49pism1z4qpid3745w8x06nddifzb9165j2h6n7fivgav"; + version = "1.0.1"; + sha256 = "03dmyfpv5h6l1f5vag3h3v3bn6c1j3335k8rywknnliyglvb6acw"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -220879,21 +220453,6 @@ self: { }) {}; "xml-basic" = callPackage - ({ mkDerivation, base, containers, data-accessor - , explicit-exception, utility-ht - }: - mkDerivation { - pname = "xml-basic"; - version = "0.1.2"; - sha256 = "1s8415gj65zm6mbbrmkav92zkwi0q8mf892ajc2qz9hfmhxab27q"; - libraryHaskellDepends = [ - base containers data-accessor explicit-exception utility-ht - ]; - description = "Basics for XML/HTML representation and processing"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "xml-basic_0_1_3" = callPackage ({ mkDerivation, base, containers, data-accessor , explicit-exception, semigroups, utility-ht }: @@ -220907,7 +220466,6 @@ self: { ]; description = "Basics for XML/HTML representation and processing"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "xml-catalog" = callPackage @@ -222832,17 +222390,17 @@ self: { "yampa-sdl2" = callPackage ({ mkDerivation, base, colour, linear, sdl2, sdl2-gfx, StateVar - , text, Yampa + , stm, text, Yampa }: mkDerivation { pname = "yampa-sdl2"; - version = "0.0.1.1"; - sha256 = "0p162kaznv4mk8x3zvkb7vnjwsqn8gydblpxijqsjgzc3qbi5mwq"; + version = "0.0.3.1"; + sha256 = "07wz2473i9z5rxpi6mb1m19fdps7fxl50hbp60b8ihbf2mck1br7"; libraryHaskellDepends = [ - base colour linear sdl2 sdl2-gfx StateVar text Yampa + base colour linear sdl2 sdl2-gfx StateVar stm text Yampa ]; testHaskellDepends = [ - base colour linear sdl2 sdl2-gfx StateVar text Yampa + base colour linear sdl2 sdl2-gfx StateVar stm text Yampa ]; homepage = "https://github.com/Simre1/YampaSDL2#readme"; description = "Yampa and SDL2 made easy"; @@ -223196,8 +222754,8 @@ self: { }: mkDerivation { pname = "yesod-alerts"; - version = "0.1.1.0"; - sha256 = "15vzc9ajq3jwmqfs9x4snp7msnj4gn15wh4qxm7dl4r12ha2rass"; + version = "0.1.2.0"; + sha256 = "0vqlkcb2q3wz6hp6ay6gj41vwlmq4x7flfbgq36ygnwwxjkwhllf"; libraryHaskellDepends = [ alerts base blaze-html blaze-markup safe text yesod-core ]; @@ -223497,6 +223055,33 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "yesod-auth-hashdb_1_7" = callPackage + ({ mkDerivation, aeson, base, basic-prelude, bytestring, containers + , hspec, http-conduit, http-types, monad-logger, network-uri + , persistent, persistent-sqlite, resourcet, text + , unordered-containers, wai-extra, yesod, yesod-auth, yesod-core + , yesod-form, yesod-persistent, yesod-test + }: + mkDerivation { + pname = "yesod-auth-hashdb"; + version = "1.7"; + sha256 = "072g8c2phhgphj0469qg9chbninxwjkigy2pzhfl51zbm50skfb5"; + libraryHaskellDepends = [ + aeson base bytestring persistent text yesod-auth yesod-core + yesod-form yesod-persistent + ]; + testHaskellDepends = [ + aeson base basic-prelude bytestring containers hspec http-conduit + http-types monad-logger network-uri persistent-sqlite resourcet + text unordered-containers wai-extra yesod yesod-auth yesod-core + yesod-test + ]; + homepage = "https://github.com/paul-rouse/yesod-auth-hashdb"; + description = "Authentication plugin for Yesod"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "yesod-auth-hmac-keccak" = callPackage ({ mkDerivation, aeson, base, bytestring, cryptonite, mtl , persistent, random, shakespeare, text, yesod-auth, yesod-core @@ -225216,7 +224801,7 @@ self: { license = stdenv.lib.licenses.mit; }) {}; - "yesod-test_1_6_1" = callPackage + "yesod-test_1_6_2" = callPackage ({ mkDerivation, attoparsec, base, blaze-builder, blaze-html , blaze-markup, bytestring, case-insensitive, conduit, containers , cookie, hspec, hspec-core, html-conduit, http-types, HUnit @@ -225226,8 +224811,8 @@ self: { }: mkDerivation { pname = "yesod-test"; - version = "1.6.1"; - sha256 = "1lwckkbm5i0fj8ixa396v7h683kdvbmxdrwc62y3qbi7hlz2iars"; + version = "1.6.2"; + sha256 = "172m7nafq8w1j3cm6p110vlxzy14y6pgm8ica357b1qn0wvzd39x"; libraryHaskellDepends = [ attoparsec base blaze-builder blaze-html blaze-markup bytestring case-insensitive conduit containers cookie hspec-core html-conduit @@ -225236,7 +224821,7 @@ self: { ]; testHaskellDepends = [ base bytestring containers hspec html-conduit http-types HUnit text - unliftio wai xml-conduit yesod-core yesod-form + unliftio wai wai-extra xml-conduit yesod-core yesod-form ]; homepage = "http://www.yesodweb.com"; description = "integration testing for WAI/Yesod Applications"; @@ -226115,8 +225700,8 @@ self: { }: mkDerivation { pname = "yst"; - version = "0.6"; - sha256 = "059mbh2x4i521kg99b2mmgvc2rwbid641ilzc14ri7ym7ljkw1mv"; + version = "0.6.0.1"; + sha256 = "03x6f5zvmgppr1hkg0lxrapgnlk9s7i974d1gzscs1nvsi426bqb"; isLibrary = false; isExecutable = true; enableSeparateDataOutput = true; @@ -226131,18 +225716,15 @@ self: { }) {}; "yu-auth" = callPackage - ({ mkDerivation, base, cryptonite, hspec, hspec-wai, memory - , MonadRandom, random, wai, yesod-core, yesod-test, yu-utils + ({ mkDerivation, base, cryptonite, memory, MonadRandom, random + , yu-utils }: mkDerivation { pname = "yu-auth"; - version = "0.1.0.0"; - sha256 = "139gbrwzbp9zyx8klqvp07lh1fngs6i17xbrrnkssr85q12s79f9"; + version = "0.1.1.10"; + sha256 = "165m0ppp60gh5c6wlyjbvqlsh5gbpr0xz173ivkprjalxivr4r6j"; libraryHaskellDepends = [ base cryptonite memory yu-utils ]; - testHaskellDepends = [ - base hspec hspec-wai MonadRandom random wai yesod-core yesod-test - yu-utils - ]; + testHaskellDepends = [ base MonadRandom random yu-utils ]; homepage = "https://github.com/Qinka/Yu"; description = "Auth module for Yu"; license = stdenv.lib.licenses.gpl3; @@ -226152,8 +225734,8 @@ self: { ({ mkDerivation, base, blaze-markup, hspec, yu-auth, yu-utils }: mkDerivation { pname = "yu-core"; - version = "0.1.0.0"; - sha256 = "1ly4vasf70lm8wns2s8daxd0hpnyjs1cc6vklafk6vvk6g2a01p1"; + version = "0.1.1.2"; + sha256 = "17wdvwa6hs38asvsysv2g0xzjc654479c0229hggpyq17flfzwjs"; libraryHaskellDepends = [ base yu-auth yu-utils ]; testHaskellDepends = [ base blaze-markup hspec yu-utils ]; homepage = "https://github.com/Qinka/Yu"; @@ -226166,8 +225748,8 @@ self: { ({ mkDerivation, base, cmdargs, yaml, yu-auth, yu-core, yu-utils }: mkDerivation { pname = "yu-launch"; - version = "0.1.0.6"; - sha256 = "0a4ckivwzgp46a8m68qal5mhblw4k84xnmlsi8701j6n5nmhsxzi"; + version = "0.1.1.0"; + sha256 = "0nh40iy79m6jc4z5x773sra7i6jr21w80809vbh5xvjhg9l4aym8"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -226185,8 +225767,8 @@ self: { }: mkDerivation { pname = "yu-tool"; - version = "0.1.0.0"; - sha256 = "181xqiwzhwaglgj9j307apdzmai5hk1dlrfl8njzy584rsrqjlqx"; + version = "0.1.1.30"; + sha256 = "00pkw78pfwl089608y6ambw522v6qgnp7fgky98jdb9p5kbv6nyi"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -226199,19 +225781,20 @@ self: { "yu-utils" = callPackage ({ mkDerivation, aeson, base, blaze-html, blaze-markup, bytestring - , cmdargs, conduit, fast-logger, gitrev, http-types, monad-control - , monad-logger, mongoDB, mtl, network, parsec, resource-pool - , shakespeare, signal, template-haskell, text, time, transformers - , wai, wai-extra, wai-logger, warp, xml-hamlet, yesod-core + , cmdargs, conduit, exceptions, fast-logger, gitrev, http-types + , monad-control, monad-logger, mongoDB, mtl, network, parsec + , resource-pool, shakespeare, signal, template-haskell, text, time + , transformers, wai, wai-extra, wai-logger, warp, xml-hamlet + , yesod-core }: mkDerivation { pname = "yu-utils"; - version = "0.1.0.0"; - sha256 = "0sr03639mb49s0s2wkl642x9fhvm5qjrrvpqgf08jay5ph6l51g6"; + version = "0.1.1.0"; + sha256 = "1njmfs0m1xj5vwqj8qmhblnnzqwdjxxf732bdinp4x9wv7x68vz6"; libraryHaskellDepends = [ aeson base blaze-html blaze-markup bytestring cmdargs conduit - fast-logger gitrev http-types monad-control monad-logger mongoDB - mtl network parsec resource-pool shakespeare signal + exceptions fast-logger gitrev http-types monad-control monad-logger + mongoDB mtl network parsec resource-pool shakespeare signal template-haskell text time transformers wai wai-extra wai-logger warp xml-hamlet yesod-core ]; @@ -226835,39 +226418,14 @@ self: { }) {}; "zip-archive" = callPackage - ({ mkDerivation, array, base, binary, bytestring, containers - , digest, directory, filepath, HUnit, mtl, old-time, pretty - , process, temporary, text, time, unix, unzip, zip, zlib - }: - mkDerivation { - pname = "zip-archive"; - version = "0.3.2.2"; - sha256 = "1xyabamc3670r8qjwpyfxcbsxhsnzy6i9n5zx58maq830lwp2m9c"; - isLibrary = true; - isExecutable = true; - libraryHaskellDepends = [ - array base binary bytestring containers digest directory filepath - mtl old-time pretty text time unix zlib - ]; - testHaskellDepends = [ - base bytestring directory filepath HUnit old-time process temporary - time unix - ]; - testToolDepends = [ unzip zip ]; - homepage = "http://github.com/jgm/zip-archive"; - description = "Library for creating and modifying zip archives"; - license = stdenv.lib.licenses.bsd3; - }) {inherit (pkgs) unzip; inherit (pkgs) zip;}; - - "zip-archive_0_3_2_3" = callPackage ({ mkDerivation, array, base, binary, bytestring, Cabal, containers , digest, directory, filepath, HUnit, mtl, old-time, pretty , process, temporary, text, time, unix, unzip, zlib }: mkDerivation { pname = "zip-archive"; - version = "0.3.2.3"; - sha256 = "1b3zll9j3w57kxnng09c5xcj0d18ldj9i3f8qks4kyyrsgyviw9x"; + version = "0.3.2.4"; + sha256 = "119p7f9dbims5swf23czyg4r4p0sjmgwfh042bpxw54d9p9jwq90"; isLibrary = true; isExecutable = true; setupHaskellDepends = [ base Cabal ]; @@ -226883,7 +226441,6 @@ self: { homepage = "http://github.com/jgm/zip-archive"; description = "Library for creating and modifying zip archives"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {inherit (pkgs) unzip;}; "zip-conduit" = callPackage diff --git a/pkgs/development/haskell-modules/make-package-set.nix b/pkgs/development/haskell-modules/make-package-set.nix index 2c628eff5622..458c4eae136d 100644 --- a/pkgs/development/haskell-modules/make-package-set.nix +++ b/pkgs/development/haskell-modules/make-package-set.nix @@ -148,14 +148,13 @@ in package-set { inherit pkgs stdenv callPackage; } self // { callCabal2nix = name: src: args: overrideCabal (self.callPackage (haskellSrc2nix { inherit name; - src = pkgs.lib.cleanSourceWith - { src = if pkgs.lib.canCleanSource src - then src - else pkgs.safeDiscardStringContext src; - filter = path: type: - pkgs.lib.hasSuffix "${name}.cabal" path || - pkgs.lib.hasSuffix "package.yaml" path; - }; + src = + let filter = path: type: + pkgs.lib.hasSuffix "${name}.cabal" path || + baseNameOf path == "package.yaml"; + in if pkgs.lib.canCleanSource src + then pkgs.lib.cleanSourceWith { inherit src filter; } + else src; }) args) (_: { inherit src; }); # : { root : Path diff --git a/pkgs/development/interpreters/acl2/default.nix b/pkgs/development/interpreters/acl2/default.nix index 16734c184eb8..14b9a78af46e 100644 --- a/pkgs/development/interpreters/acl2/default.nix +++ b/pkgs/development/interpreters/acl2/default.nix @@ -3,11 +3,11 @@ sbcl }: let hashes = { - "7.4" = "04jb789nks9llwysxz1zw9pq1dh0j39b5fcmivcc4bq9v9cga2l1"; + "8.0" = "1x1giy2c1y6krg3kf8pf9wrmvk981shv0pxcwi483yjqm90xng4r"; }; in stdenv.mkDerivation rec { name = "acl2-${version}"; - version = "7.4"; + version = "8.0"; src = fetchFromGitHub { owner = "acl2-devel"; diff --git a/pkgs/development/interpreters/angelscript/default.nix b/pkgs/development/interpreters/angelscript/default.nix index 2608388e1526..01348c753484 100644 --- a/pkgs/development/interpreters/angelscript/default.nix +++ b/pkgs/development/interpreters/angelscript/default.nix @@ -3,10 +3,10 @@ let s = # Generated upstream information rec { baseName="angelscript"; - version = "2.31.2"; + version = "2.32.0"; name="${baseName}-${version}"; url="http://www.angelcode.com/angelscript/sdk/files/angelscript_${version}.zip"; - sha256 = "1cl1yg36ad4wq0vks4xg0hv7iyvq6yzsd4y1jng5qdf8qybq02qc"; + sha256 = "0675hza06v3grxyqfy70gzm57idmbbm7qvi6bg5vf8m6mpw757dl"; }; buildInputs = [ unzip diff --git a/pkgs/development/interpreters/dhall/default.nix b/pkgs/development/interpreters/dhall/default.nix new file mode 100644 index 000000000000..8e1df36e4127 --- /dev/null +++ b/pkgs/development/interpreters/dhall/default.nix @@ -0,0 +1,18 @@ +{ haskell, haskellPackages, stdenvNoCC }: + +let + static = haskell.lib.justStaticExecutables haskellPackages.dhall; + +in static.overrideAttrs (old: { + passthru = old.passthru or {} // { + prelude = stdenvNoCC.mkDerivation { + name = "dhall-prelude"; + inherit (old) src; + phases = [ "unpackPhase" "installPhase" ]; + installPhase = '' + mkdir $out + cp -r Prelude/* $out/ + ''; + }; + }; +}) diff --git a/pkgs/development/interpreters/gnu-apl/default.nix b/pkgs/development/interpreters/gnu-apl/default.nix index 4d38545a44f0..2f5ce0e76350 100644 --- a/pkgs/development/interpreters/gnu-apl/default.nix +++ b/pkgs/development/interpreters/gnu-apl/default.nix @@ -12,6 +12,9 @@ stdenv.mkDerivation rec { buildInputs = [ readline gettext ncurses ]; + # Needed with GCC 7 + NIX_CFLAGS_COMPILE = "-Wno-error=int-in-bool-context"; + patchPhase = optionalString stdenv.isDarwin '' substituteInPlace src/LApack.cc --replace "malloc.h" "malloc/malloc.h" ''; diff --git a/pkgs/development/interpreters/joker/default.nix b/pkgs/development/interpreters/joker/default.nix index dff3c1b201fb..ea3974525a96 100644 --- a/pkgs/development/interpreters/joker/default.nix +++ b/pkgs/development/interpreters/joker/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { name = "joker-${version}"; - version = "0.8.7"; + version = "0.8.9"; goPackagePath = "github.com/candid82/joker"; @@ -10,7 +10,7 @@ buildGoPackage rec { rev = "v${version}"; owner = "candid82"; repo = "joker"; - sha256 = "1cmvja8qdrrzacdfn944f22mdg8177qkxfrb10ykq59c2yp1xn01"; + sha256 = "0ph5f3vc6x1qfh3zn3va2xqx3axv1i2ywbhxayk58p55fxblj5c9"; }; preBuild = "go generate ./..."; diff --git a/pkgs/development/interpreters/perl/default.nix b/pkgs/development/interpreters/perl/default.nix index 14a4bac47f62..f7324fc6d01a 100644 --- a/pkgs/development/interpreters/perl/default.nix +++ b/pkgs/development/interpreters/perl/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurlBoot, buildPackages, enableThreading ? stdenv ? glibc }: +{ lib, stdenv, fetchurlBoot, buildPackages, enableThreading ? stdenv ? glibc, fetchpatch }: with lib; @@ -133,10 +133,19 @@ let sha256 = "072j491rpz2qx2sngbg4flqh4lx5865zyql7b9lqm6s1kknjdrh8"; }; - nativeBuildInputs = [ buildPackages.stdenv.cc ]; + # https://github.com/arsv/perl-cross/issues/60 + perl-cross-gcc7-patch = fetchpatch { + url = "https://github.com/arsv/perl-cross/commit/07208bc1707b8be3ea170c62c59120020cf0f87f.patch"; + sha256 = "1gh8w9m5if2s0lrx2x8f8grp74d1l6d46m8jglpjm5a1kf55j810"; + }; + + depsBuildBuild = [ buildPackages.stdenv.cc ]; postUnpack = '' unpackFile ${perl-cross-src} + cd perl-cross-* + patch -Np1 -i ${perl-cross-gcc7-patch} + cd .. cp -R perl-cross-${crossVersion}/* perl-${version}/ ''; diff --git a/pkgs/development/interpreters/racket/default.nix b/pkgs/development/interpreters/racket/default.nix index 4a980ec418f0..e3aa3e8a6f5c 100644 --- a/pkgs/development/interpreters/racket/default.nix +++ b/pkgs/development/interpreters/racket/default.nix @@ -4,6 +4,7 @@ , libpng, libtool, mpfr, openssl, pango, poppler , readline, sqlite , disableDocs ? false +, CoreFoundation }: let @@ -47,9 +48,13 @@ stdenv.mkDerivation rec { FONTCONFIG_FILE = fontsConf; LD_LIBRARY_PATH = libPath; - NIX_LDFLAGS = stdenv.lib.optionalString stdenv.cc.isGNU "-lgcc_s"; + NIX_LDFLAGS = stdenv.lib.concatStringsSep " " [ + (stdenv.lib.optionalString (stdenv.cc.isGNU && ! stdenv.isDarwin) "-lgcc_s") + (stdenv.lib.optionalString stdenv.isDarwin "-framework CoreFoundation") + ]; - buildInputs = [ fontconfig libffi libtool makeWrapper sqlite ]; + buildInputs = [ fontconfig libffi libtool makeWrapper sqlite ] + ++ stdenv.lib.optionals stdenv.isDarwin [ CoreFoundation ]; preConfigure = '' unset AR diff --git a/pkgs/development/interpreters/racket/minimal.nix b/pkgs/development/interpreters/racket/minimal.nix index 6bac9a0f3414..c63d0040cfee 100644 --- a/pkgs/development/interpreters/racket/minimal.nix +++ b/pkgs/development/interpreters/racket/minimal.nix @@ -14,6 +14,6 @@ racket.overrideAttrs (oldAttrs: rec { as well as libraries that live in collections. In particular, raco and the pkg library are still bundled. ''; - platforms = [ "x86_64-linux" "aarch64-linux" ]; + platforms = [ "x86_64-linux" "aarch64-linux" "x86_64-darwin" ]; }; }) diff --git a/pkgs/development/interpreters/spidermonkey/17.nix b/pkgs/development/interpreters/spidermonkey/17.nix index da5fc193a222..9c47ebe79b6e 100644 --- a/pkgs/development/interpreters/spidermonkey/17.nix +++ b/pkgs/development/interpreters/spidermonkey/17.nix @@ -18,6 +18,16 @@ stdenv.mkDerivation rec { postUnpack = "sourceRoot=\${sourceRoot}/js/src"; + patches = [ + (fetchurl { + name = "jsoptparse-gcc7.patch"; + url = "https://src.fedoraproject.org/cgit/rpms/mozjs17.git/plain/" + + "mozjs17.0.0-gcc7.patch?id=43b846629a299f"; + sha256 = "17plyaq0jwf9wli4zlgvh4ri3zyk6nj1fiakh3wnd37nsl90raf9"; + }) + ]; + patchFlags = "-p3"; + postPatch = '' # Fixes an issue with version detection under perl 5.22.x sed -i 's/(defined\((@TEMPLATE_FILE)\))/\1/' config/milestone.pl diff --git a/pkgs/development/interpreters/spidermonkey/52.nix b/pkgs/development/interpreters/spidermonkey/52.nix index 75c7c64e324d..4992ea04f110 100644 --- a/pkgs/development/interpreters/spidermonkey/52.nix +++ b/pkgs/development/interpreters/spidermonkey/52.nix @@ -1,61 +1,52 @@ -{ stdenv, fetchurl, autoconf213, pkgconfig, perl, python2, zip, which, readline, icu, zlib, nspr }: +{ stdenv, fetchurl, fetchpatch, autoconf213, pkgconfig, perl, python2, zip, which, readline, icu, zlib, nspr }: -stdenv.mkDerivation rec { - version = "52.2.1gnome1"; +let + version = "52.6.0"; +in stdenv.mkDerivation rec { name = "spidermonkey-${version}"; - # the release notes point to some guys home directory, see - # https://developer.mozilla.org/en-US/docs/Mozilla/Projects/SpiderMonkey/Releases/38 - # probably it would be more ideal to pull a particular tag/revision - # from the mercurial repo src = fetchurl { - url = "mirror://gnome/teams/releng/tarballs-needing-help/mozjs/mozjs-${version}.tar.gz"; - sha256 = "1bxhz724s1ch1c0kdlzlg9ylhg1mk8kbhdgfkax53fyvn51pjs9i"; + url = "mirror://mozilla/firefox/releases/${version}esr/source/firefox-${version}esr.source.tar.xz"; + sha256 = "0hhyd4ni4jja7jd687dm0csi1jcjxahf918zbjzr8njz655djz2q"; }; buildInputs = [ readline icu zlib nspr ]; nativeBuildInputs = [ autoconf213 pkgconfig perl which python2 zip ]; - postUnpack = "sourceRoot=\${sourceRoot}/js/src"; + patches = [ + # needed to build gnome3.gjs + (fetchpatch { + name = "mozjs52-disable-mozglue.patch"; + url = https://git.archlinux.org/svntogit/packages.git/plain/trunk/mozjs52-disable-mozglue.patch?h=packages/js52&id=4279d2e18d9a44f6375f584911f63d13de7704be; + sha256 = "18wkss0agdyff107p5lfflk72qiz350xqw2yqc353alkx4fsfpz0"; + }) + ]; preConfigure = '' export CXXFLAGS="-fpermissive" export LIBXUL_DIST=$out export PYTHON="${python2.interpreter}" + + cd js/src + + autoconf ''; configureFlags = [ - "--enable-threadsafe" "--with-system-nspr" "--with-system-zlib" "--with-system-icu" "--with-intl-api" "--enable-readline" - - # enabling these because they're wanted by 0ad. They may or may - # not be good defaults for other uses. - "--enable-gcgenerational" "--enable-shared-js" ]; - # This addresses some build system bug. It's quite likely to be safe - # to re-enable parallel builds if the source revision changes. enableParallelBuilding = true; - postFixup = '' - # The headers are symlinks to a directory that doesn't get put - # into $out, so they end up broken. Fix that by just resolving the - # symlinks. - for i in $(find $out -type l); do - cp --remove-destination "$(readlink "$i")" "$i"; - done - ''; - meta = with stdenv.lib; { description = "Mozilla's JavaScript engine written in C/C++"; homepage = https://developer.mozilla.org/en/SpiderMonkey; - # TODO: MPL/GPL/LGPL tri-license. - + license = licenses.gpl2; # TODO: MPL/GPL/LGPL tri-license. maintainers = [ maintainers.abbradar ]; platforms = platforms.linux; }; diff --git a/pkgs/development/interpreters/supercollider/default.nix b/pkgs/development/interpreters/supercollider/default.nix index 19abfe1cea27..13184ad50e86 100644 --- a/pkgs/development/interpreters/supercollider/default.nix +++ b/pkgs/development/interpreters/supercollider/default.nix @@ -9,12 +9,12 @@ in stdenv.mkDerivation rec { name = "supercollider-${version}"; - version = "3.8.1"; + version = "3.9.1"; src = fetchurl { url = "https://github.com/supercollider/supercollider/releases/download/Version-${version}/SuperCollider-${version}-Source-linux.tar.bz2"; - sha256 = "1y8yb20k3lvj7c93qz2srrkvfv175n4n7p3qj89w0dp085mj0qmw"; + sha256 = "150fgnjcmb06r3pa3mbsvb4iwnqlimjwdxgbs6p55zz6g8wbln7a"; }; hardeningDisable = [ "stackprotector" ]; diff --git a/pkgs/development/libraries/ace/default.nix b/pkgs/development/libraries/ace/default.nix index 42988e334b07..230a7e64dff3 100644 --- a/pkgs/development/libraries/ace/default.nix +++ b/pkgs/development/libraries/ace/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "ace-${version}"; - version = "6.4.3"; + version = "6.4.6"; src = fetchurl { url = "http://download.dre.vanderbilt.edu/previous_versions/ACE-${version}.tar.bz2"; - sha256 = "07dvpi3abmjvg7m0aak4x82aj8cvw5zl2cqj525wd3fl6y0pn3mq"; + sha256 = "0xvdwk2505s615fgsy6g33ncxx70vszqspx0bg6lm8hfd3hb4qyj"; }; enableParallelBuilding = true; diff --git a/pkgs/development/libraries/alembic/default.nix b/pkgs/development/libraries/alembic/default.nix index a185f19a9a16..bcf819702da9 100644 --- a/pkgs/development/libraries/alembic/default.nix +++ b/pkgs/development/libraries/alembic/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { name = "alembic-${version}"; - version = "1.7.4"; + version = "1.7.5"; src = fetchFromGitHub { owner = "alembic"; repo = "alembic"; rev = "${version}"; - sha256 = "00r6d8xk2sq5hdl5lp14nhyh1b2d68fxpzbm69fk6iq2f2gv0iqv"; + sha256 = "1p5zd9kdwnrwg604bq79ianc5bw6mx6i5d7yc4r11xrbphlc9m1g"; }; outputs = [ "bin" "dev" "out" "lib" ]; diff --git a/pkgs/development/libraries/appstream-glib/default.nix b/pkgs/development/libraries/appstream-glib/default.nix index dc5de2b382a1..1ccfa85591f4 100644 --- a/pkgs/development/libraries/appstream-glib/default.nix +++ b/pkgs/development/libraries/appstream-glib/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchFromGitHub, substituteAll, pkgconfig, gettext, gtk3, glib -, gtk_doc, libarchive, gobjectIntrospection, libxslt, pngquant +, gtk-doc, libarchive, gobjectIntrospection, libxslt, pngquant , sqlite, libsoup, gcab, attr, acl, docbook_xsl, docbook_xml_dtd_42 -, libuuid, json_glib, meson, gperf, ninja +, libuuid, json-glib, meson, gperf, ninja }: stdenv.mkDerivation rec { name = "appstream-glib-0.7.6"; @@ -17,11 +17,11 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ - meson pkgconfig ninja gtk_doc libxslt docbook_xsl docbook_xml_dtd_42 + meson pkgconfig ninja gtk-doc libxslt docbook_xsl docbook_xml_dtd_42 ]; buildInputs = [ glib gettext sqlite libsoup - gcab attr acl libuuid json_glib + gcab attr acl libuuid json-glib libarchive gobjectIntrospection gperf ]; propagatedBuildInputs = [ gtk3 ]; diff --git a/pkgs/development/libraries/appstream/default.nix b/pkgs/development/libraries/appstream/default.nix index b79f274b9c3a..61ee182ce627 100644 --- a/pkgs/development/libraries/appstream/default.nix +++ b/pkgs/development/libraries/appstream/default.nix @@ -1,37 +1,55 @@ -{ stdenv, fetchFromGitHub, cmake, pkgconfig, gettext, intltool -, xmlto, docbook_xsl, docbook_xml_dtd_45 -, glib, xapian, libxml2, libyaml, gobjectIntrospection +{ stdenv, fetchpatch, fetchFromGitHub, meson, ninja, pkgconfig, gettext +, xmlto, docbook_xsl, docbook_xml_dtd_45, libxslt +, libstemmer, glib, xapian, libxml2, libyaml, gobjectIntrospection , pcre, itstool }: stdenv.mkDerivation rec { name = "appstream-${version}"; - version = "0.10.6"; + version = "0.11.8"; src = fetchFromGitHub { - owner = "ximion"; - repo = "appstream"; - rev = "APPSTREAM_0_10_6"; - sha256 = "1fg7zxx2qhkyj7fmcpwbf80b72d16kyi8dadi111kf00sgzfbiyy"; + owner = "ximion"; + repo = "appstream"; + rev = "APPSTREAM_${stdenv.lib.replaceStrings ["."] ["_"] version}"; + sha256 = "07vzz57g1p5byj2jfg17y5n3il0g07d9wkiynzwra71mcxar1p08"; }; + patches = [ + # drop this in version 0.11.9 and above + (fetchpatch { + name = "define-location-and-soname.patch"; + url = "https://github.com/ximion/appstream/commit/3e58f9c9.patch"; + sha256 = "1ffgbdfg80yq5vahjrvdd4f8xsp32ksm9vyasfmc7hzhx294s78w"; + }) + ]; + nativeBuildInputs = [ - cmake pkgconfig gettext intltool - xmlto docbook_xsl docbook_xml_dtd_45 + meson ninja pkgconfig gettext + libxslt xmlto docbook_xsl docbook_xml_dtd_45 gobjectIntrospection itstool ]; - buildInputs = [ pcre glib xapian libxml2 libyaml ]; + buildInputs = [ libstemmer pcre glib xapian libxml2 libyaml ]; - cmakeFlags = '' - -DSTEMMING=off - ''; + prePatch = '' + substituteInPlace meson.build \ + --replace /usr/include ${libstemmer}/include + + substituteInPlace data/meson.build \ + --replace /etc $out/etc + ''; + + mesonFlags = [ + "-Dapidocs=false" + "-Ddocs=false" + "-Dgir=false" + ]; meta = with stdenv.lib; { description = "Software metadata handling library"; homepage = https://www.freedesktop.org/wiki/Distributions/AppStream/; - longDescription = - '' + longDescription = '' AppStream is a cross-distro effort for building Software-Center applications and enhancing metadata provided by software components. It provides specifications for meta-information which is shipped by upstream projects and diff --git a/pkgs/development/libraries/appstream/qt.nix b/pkgs/development/libraries/appstream/qt.nix new file mode 100644 index 000000000000..beff83f2365b --- /dev/null +++ b/pkgs/development/libraries/appstream/qt.nix @@ -0,0 +1,25 @@ +{ stdenv, appstream, qtbase, qttools }: + +stdenv.mkDerivation rec { + name = "appstream-qt-${version}"; + inherit (appstream) version src patches prePatch; + + buildInputs = appstream.buildInputs ++ [ appstream qtbase ]; + + nativeBuildInputs = appstream.nativeBuildInputs ++ [ qttools ]; + + mesonFlags = appstream.mesonFlags ++ [ "-Dqt=true" ]; + + postInstall = '' + rm -rf $out/{bin,etc,include/appstream,lib/pkgconfig,lib/libappstream.so*,share} + ''; + + preFixup = '' + patchelf --add-needed ${appstream}/lib/libappstream.so.4 \ + $out/lib/libAppStreamQt.so + ''; + + meta = appstream.meta // { + description = "Software metadata handling library - Qt"; + }; +} diff --git a/pkgs/development/libraries/armadillo/default.nix b/pkgs/development/libraries/armadillo/default.nix index 0d42ff9c680d..a5ca79c0d82e 100644 --- a/pkgs/development/libraries/armadillo/default.nix +++ b/pkgs/development/libraries/armadillo/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, cmake, openblasCompat, superlu, hdf5 }: stdenv.mkDerivation rec { - version = "8.300.0"; + version = "8.400.0"; name = "armadillo-${version}"; src = fetchurl { url = "mirror://sourceforge/arma/armadillo-${version}.tar.xz"; - sha256 = "0g6wcfrmb2hndz995wrlc80v6d39mhxf26lmycaqv5bjfq050ic5"; + sha256 = "16yxhn904ll48879vmycv84rja28im0mrcfgb03nm7bs8lpvrdjw"; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/development/libraries/aspell/default.nix b/pkgs/development/libraries/aspell/default.nix index cccd93e5d4dd..d0e93337a390 100644 --- a/pkgs/development/libraries/aspell/default.nix +++ b/pkgs/development/libraries/aspell/default.nix @@ -1,5 +1,6 @@ -{stdenv, fetchurl, perl -, searchNixProfiles ? true}: +{ stdenv, fetchurl, fetchpatch, perl +, searchNixProfiles ? true +}: stdenv.mkDerivation rec { name = "aspell-0.60.6.1"; @@ -9,10 +10,16 @@ stdenv.mkDerivation rec { sha256 = "1qgn5psfyhbrnap275xjfrzppf5a83fb67gpql0kfqv37al869gm"; }; - patchPhase = '' + patches = [ + (fetchpatch { # remove in >= 0.60.7 + name = "gcc-7.patch"; + url = "https://github.com/GNUAspell/aspell/commit/8089fa02122fed0a.diff"; + sha256 = "1b3p1zy2lqr2fknddckm58hyk95hw4scf6hzjny1v9iaic2p37ix"; + }) + ] ++ stdenv.lib.optional searchNixProfiles ./data-dirs-from-nix-profiles.patch; + + postPatch = '' patch interfaces/cc/aspell.h < ${./clang.patch} - '' + stdenv.lib.optionalString searchNixProfiles '' - patch -p1 < ${./data-dirs-from-nix-profiles.patch} ''; nativeBuildInputs = [ perl ]; diff --git a/pkgs/development/libraries/at-spi2-atk/default.nix b/pkgs/development/libraries/at-spi2-atk/default.nix index 52c3a5f8c076..86f35d7f578e 100644 --- a/pkgs/development/libraries/at-spi2-atk/default.nix +++ b/pkgs/development/libraries/at-spi2-atk/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, python, pkgconfig, popt, atk, libX11, libICE, xorg, libXi -, intltool, dbus_glib, at_spi2_core, libSM }: +, intltool, dbus-glib, at-spi2-core, libSM }: stdenv.mkDerivation rec { versionMajor = "2.26"; @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig intltool ]; buildInputs = [ python popt atk libX11 libICE xorg.libXtst libXi - dbus_glib at_spi2_core libSM ]; + dbus-glib at-spi2-core libSM ]; meta = with stdenv.lib; { platforms = platforms.unix; diff --git a/pkgs/development/libraries/at-spi2-core/default.nix b/pkgs/development/libraries/at-spi2-core/default.nix index 1743faafa687..b717101b3e13 100644 --- a/pkgs/development/libraries/at-spi2-core/default.nix +++ b/pkgs/development/libraries/at-spi2-core/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, python, pkgconfig, popt, gettext, dbus_glib +{ stdenv, fetchurl, python, pkgconfig, popt, gettext, dbus-glib , libX11, xextproto, libSM, libICE, libXtst, libXi, gobjectIntrospection }: stdenv.mkDerivation rec { @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig gettext gobjectIntrospection ]; buildInputs = [ - python popt dbus_glib + python popt dbus-glib libX11 xextproto libSM libICE libXtst libXi ]; diff --git a/pkgs/development/libraries/avro-c/default.nix b/pkgs/development/libraries/avro-c/default.nix new file mode 100644 index 000000000000..8b787855c4de --- /dev/null +++ b/pkgs/development/libraries/avro-c/default.nix @@ -0,0 +1,30 @@ +{ stdenv, bash, cmake, fetchurl, pkgconfig, jansson, zlib }: + +let + version = "1.8.2"; +in stdenv.mkDerivation rec { + name = "avro-c-${version}"; + + src = fetchurl { + url = "mirror://apache/avro/avro-${version}/c/avro-c-${version}.tar.gz"; + sha256 = "03pixl345kkpn1jds03rpdcwjabi41rgdzi8f7y93gcg5cmrhfa6"; + }; + + postPatch = '' + patchShebangs . + ''; + + nativeBuildInputs = [ pkgconfig cmake ]; + + buildInputs = [ jansson zlib ]; + + enableParallelBuilding = true; + + meta = with stdenv.lib; { + description = "A C library which implements parts of the Avro Specification"; + homepage = https://avro.apache.org/; + license = licenses.asl20; + maintainers = with maintainers; [ lblasc ]; + platforms = platforms.all; + }; +} diff --git a/pkgs/development/libraries/aws-sdk-cpp/default.nix b/pkgs/development/libraries/aws-sdk-cpp/default.nix index 1983aab0e324..cd42652e091a 100644 --- a/pkgs/development/libraries/aws-sdk-cpp/default.nix +++ b/pkgs/development/libraries/aws-sdk-cpp/default.nix @@ -58,6 +58,8 @@ in stdenv.mkDerivation rec { rm aws-cpp-sdk-core-tests/aws/auth/AWSCredentialsProviderTest.cpp ''; + NIX_CFLAGS_COMPILE = [ "-Wno-error=noexcept-type" ]; + meta = { description = "A C++ interface for Amazon Web Services"; homepage = https://github.com/awslabs/aws-sdk-cpp; diff --git a/pkgs/development/libraries/babl/default.nix b/pkgs/development/libraries/babl/default.nix index f7788eb93cb3..be4cf809f0c5 100644 --- a/pkgs/development/libraries/babl/default.nix +++ b/pkgs/development/libraries/babl/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl }: stdenv.mkDerivation rec { - name = "babl-0.1.42"; + name = "babl-0.1.44"; src = fetchurl { url = "http://ftp.gtk.org/pub/babl/0.1/${name}.tar.bz2"; - sha256 = "1wc7fyj9bfqfiwf1w33g3vv3wcl18pd9cxr9fc0iy391szrsynb8"; + sha256 = "0zfy1jrwdp4ja2f1rqa2m46vx6nilm73f72d4d1c8d65vshgsqzl"; }; doCheck = true; diff --git a/pkgs/development/libraries/boolstuff/default.nix b/pkgs/development/libraries/boolstuff/default.nix index 0f899e4324c1..9ec27d3e9ebc 100644 --- a/pkgs/development/libraries/boolstuff/default.nix +++ b/pkgs/development/libraries/boolstuff/default.nix @@ -3,11 +3,11 @@ let baseurl = "https://perso.b2b2c.ca/~sarrazip/dev"; in stdenv.mkDerivation rec { - name = "boolstuff-0.1.15"; + name = "boolstuff-0.1.16"; src = fetchurl { url = "${baseurl}/${name}.tar.gz"; - sha256 = "1mzw4368hqw0b6xr01yqcbs9jk9ma3qq9hk3iqxmkiwqqxgirgln"; + sha256 = "10qynbyw723gz2vrvn4xk2var172kvhlz3l3l80qbdsfb3d12wn0"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/libraries/catch/default.nix b/pkgs/development/libraries/catch/default.nix index 6c20f4d6c910..116216d500e2 100644 --- a/pkgs/development/libraries/catch/default.nix +++ b/pkgs/development/libraries/catch/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "catch-${version}"; - version = "1.11.0"; + version = "1.12.0"; src = fetchFromGitHub { owner = "catchorg"; repo = "Catch"; rev = "v${version}"; - sha256 = "0v9yw7ydvhydp78hh7cmaif4h73k5qxqpm1g7xn8i882i3s84s2s"; + sha256 = "0hkcmycvyyazzi9dywnyiipnmbx399iirh5xk5g957c8zl0505kd"; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/development/libraries/clutter/default.nix b/pkgs/development/libraries/clutter/default.nix index 3292c8e353fe..f30485f60cf9 100644 --- a/pkgs/development/libraries/clutter/default.nix +++ b/pkgs/development/libraries/clutter/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, glib, pkgconfig, mesa, libX11, libXext, libXfixes -, libXdamage, libXcomposite, libXi, libxcb, cogl, pango, atk, json_glib, +, libXdamage, libXcomposite, libXi, libxcb, cogl, pango, atk, json-glib, gobjectIntrospection, gtk3 }: @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig ]; propagatedBuildInputs = [ libX11 mesa libXext libXfixes libXdamage libXcomposite libXi cogl pango - atk json_glib gobjectIntrospection libxcb + atk json-glib gobjectIntrospection libxcb ]; configureFlags = [ "--enable-introspection" ]; # needed by muffin AFAIK diff --git a/pkgs/development/libraries/cppzmq/default.nix b/pkgs/development/libraries/cppzmq/default.nix index 301b245a9f54..9933d1034af8 100644 --- a/pkgs/development/libraries/cppzmq/default.nix +++ b/pkgs/development/libraries/cppzmq/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "cppzmq-${version}"; - version = "4.2.1"; + version = "4.2.3"; src = fetchFromGitHub { owner = "zeromq"; repo = "cppzmq"; rev = "v${version}"; - sha256 = "0hy8yxb22siimq0pf6jq6kdp9lvi5f6al1xd12c9i1jyajhp1lhk"; + sha256 = "1yjs25ra5s8zs0rhk50w3f1rrrl80hhq784lwdhh1m3risk740sa"; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/development/libraries/dbus-cplusplus/default.nix b/pkgs/development/libraries/dbus-cplusplus/default.nix index ee7afbbf2522..051405811438 100644 --- a/pkgs/development/libraries/dbus-cplusplus/default.nix +++ b/pkgs/development/libraries/dbus-cplusplus/default.nix @@ -10,11 +10,26 @@ stdenv.mkDerivation rec { sha256 = "0qafmy2i6dzx4n1dqp6pygyy6gjljnb7hwjcj2z11c1wgclsq4dw"; }; - patches = [( fetchurl { - url = http://sources.gentoo.org/cgi-bin/viewvc.cgi/gentoo-x86/dev-libs/dbus-c%2B%2B/files/dbus-c%2B%2B-0.9.0-gcc-4.7.patch; - name = "gcc-4.7.patch"; - sha256 = "0rwcz9pvc13b3yfr0lkifnfz0vb5q6dg240bzgf37ni4s8rpc72g"; - })]; + patches = [ + (fetchurl { + name = "gcc-4.7.patch"; + url = "http://sources.gentoo.org/cgi-bin/viewvc.cgi/gentoo-x86/dev-libs/" + + "dbus-c%2B%2B/files/dbus-c%2B%2B-0.9.0-gcc-4.7.patch"; + sha256 = "0rwcz9pvc13b3yfr0lkifnfz0vb5q6dg240bzgf37ni4s8rpc72g"; + }) + (fetchurl { + name = "writechar.patch"; # since gcc7 + url = "https://src.fedoraproject.org/cgit/rpms/dbus-c++.git/plain/" + + "dbus-c++-writechar.patch?id=7f371172f5c"; + sha256 = "1kkg4gbpm4hp87l25zw2a3r9c58g7vvgzcqgiman734i66zsbb9l"; + }) + (fetchurl { + name = "threading.patch"; # since gcc7 + url = "https://src.fedoraproject.org/cgit/rpms/dbus-c++.git/plain/" + + "dbus-c++-threading.patch?id=7f371172f5c"; + sha256 = "1h362anx3wyxm5lq0v8girmip1jmkdbijrmbrq7k5pp47zkhwwrq"; + }) + ]; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ dbus glib expat ]; diff --git a/pkgs/development/libraries/dleyna-renderer/default.nix b/pkgs/development/libraries/dleyna-renderer/default.nix index b9b8d8fbd750..176b05126b2b 100644 --- a/pkgs/development/libraries/dleyna-renderer/default.nix +++ b/pkgs/development/libraries/dleyna-renderer/default.nix @@ -1,4 +1,4 @@ -{ stdenv, autoreconfHook, pkgconfig, fetchFromGitHub, dleyna-connector-dbus, dleyna-core, gssdp, gupnp, gupnp_av, gupnp_dlna, libsoup, makeWrapper }: +{ stdenv, autoreconfHook, pkgconfig, fetchFromGitHub, dleyna-connector-dbus, dleyna-core, gssdp, gupnp, gupnp-av, gupnp-dlna, libsoup, makeWrapper }: stdenv.mkDerivation rec { name = "dleyna-renderer"; @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ autoreconfHook pkgconfig makeWrapper ]; - buildInputs = [ dleyna-core dleyna-connector-dbus gssdp gupnp gupnp_av gupnp_dlna libsoup ]; + buildInputs = [ dleyna-core dleyna-connector-dbus gssdp gupnp gupnp-av gupnp-dlna libsoup ]; preFixup = '' wrapProgram "$out/libexec/dleyna-renderer-service" \ diff --git a/pkgs/development/libraries/dleyna-server/default.nix b/pkgs/development/libraries/dleyna-server/default.nix index 8668cff644ed..d36e665bd85d 100644 --- a/pkgs/development/libraries/dleyna-server/default.nix +++ b/pkgs/development/libraries/dleyna-server/default.nix @@ -1,4 +1,4 @@ -{ stdenv, autoreconfHook, makeWrapper, pkgconfig, fetchFromGitHub, dleyna-core, dleyna-connector-dbus, gssdp, gupnp, gupnp_av, gupnp_dlna, libsoup }: +{ stdenv, autoreconfHook, makeWrapper, pkgconfig, fetchFromGitHub, dleyna-core, dleyna-connector-dbus, gssdp, gupnp, gupnp-av, gupnp-dlna, libsoup }: stdenv.mkDerivation rec { name = "dleyna-server"; @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ autoreconfHook pkgconfig makeWrapper ]; - buildInputs = [ dleyna-core dleyna-connector-dbus gssdp gupnp gupnp_av gupnp_dlna libsoup ]; + buildInputs = [ dleyna-core dleyna-connector-dbus gssdp gupnp gupnp-av gupnp-dlna libsoup ]; preFixup = '' wrapProgram "$out/libexec/dleyna-server-service" \ diff --git a/pkgs/development/libraries/dlib/default.nix b/pkgs/development/libraries/dlib/default.nix index bb150da67996..53ec9949f170 100644 --- a/pkgs/development/libraries/dlib/default.nix +++ b/pkgs/development/libraries/dlib/default.nix @@ -3,14 +3,14 @@ }: stdenv.mkDerivation rec { - version = "19.8"; + version = "19.9"; name = "dlib-${version}"; src = fetchFromGitHub { owner = "davisking"; repo = "dlib"; rev ="v${version}"; - sha256 = "0ras4dl1ws9f9680bi8wg0mnbqvrpn0l2xl5lrvq3jvnijb3cz9i"; + sha256 = "0lc54r928j9dg7f2wn25m887z24d31wrc14v2hn6aknp1z084lrc"; }; postPatch = '' diff --git a/pkgs/development/libraries/double-conversion/default.nix b/pkgs/development/libraries/double-conversion/default.nix index 47c165c1bad1..c656220f7609 100644 --- a/pkgs/development/libraries/double-conversion/default.nix +++ b/pkgs/development/libraries/double-conversion/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "double-conversion-${version}"; - version = "2.0.1"; + version = "3.0.0"; src = fetchFromGitHub { owner = "google"; repo = "double-conversion"; rev = "v${version}"; - sha256 = "05x5rdwndgp1vdq2z1bpvng0dd8pn93kw4vhl6nsvv9vsara2q4b"; + sha256 = "05m78wlwrg310mxh1cl3d8d0ishzfvzh84x64xmvng252m0vc8yz"; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/development/libraries/easyloggingpp/default.nix b/pkgs/development/libraries/easyloggingpp/default.nix index fe14a1b2b77c..80c3f7b100e1 100644 --- a/pkgs/development/libraries/easyloggingpp/default.nix +++ b/pkgs/development/libraries/easyloggingpp/default.nix @@ -1,18 +1,26 @@ +# To use this package with a CMake and pkg-config build: +# pkg_check_modules(EASYLOGGINGPP REQUIRED easyloggingpp) +# add_executable(main src/main.cpp ${EASYLOGGINGPP_PREFIX}/include/easylogging++.cc) { stdenv, fetchFromGitHub, cmake, gtest }: stdenv.mkDerivation rec { name = "easyloggingpp-${version}"; - version = "9.95.0"; + version = "9.96.0"; src = fetchFromGitHub { owner = "muflihun"; repo = "easyloggingpp"; rev = "v${version}"; - sha256 = "0gzmznw6ffag9x55lixxffy6x7mvb7691x0md4q9rbh88zkws7kq"; + sha256 = "134arh13rksfsxa80h6xw104458ihzp1mpblz5sprx5gxkq7yqfv"; }; + nativeBuildInputs = [cmake]; buildInputs = [gtest]; - cmakeFlags = [ "-Dtest=ON" "-Dbuild_static_lib=ON"]; + cmakeFlags = [ "-Dtest=ON" ]; NIX_CFLAGS_COMPILE = "-std=c++11" + stdenv.lib.optionalString stdenv.isLinux " -pthread"; + postInstall = '' + mkdir -p $out/include + cp ../src/easylogging++.cc $out/include + ''; meta = { description = "C++ logging library"; homepage = https://muflihun.github.io/easyloggingpp/; diff --git a/pkgs/development/libraries/eccodes/default.nix b/pkgs/development/libraries/eccodes/default.nix index 651878182dc1..eb197d117202 100644 --- a/pkgs/development/libraries/eccodes/default.nix +++ b/pkgs/development/libraries/eccodes/default.nix @@ -6,11 +6,11 @@ with stdenv.lib; stdenv.mkDerivation rec { name = "eccodes-${version}"; - version = "2.5.0"; + version = "2.6.0"; src = fetchurl { url = "https://software.ecmwf.int/wiki/download/attachments/45757960/eccodes-${version}-Source.tar.gz"; - sha256 = "0kiff19gk0w7ij0kx5ydqpsmdq499ylxxxq79lrgss218jy49aqq"; + sha256 = "0pzibd3vdqmqsqsnfir6q66p6f3cmr9hrrixzpfhf7k62vv9y1ha"; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/development/libraries/elementary-cmake-modules/default.nix b/pkgs/development/libraries/elementary-cmake-modules/default.nix new file mode 100644 index 000000000000..5287db756094 --- /dev/null +++ b/pkgs/development/libraries/elementary-cmake-modules/default.nix @@ -0,0 +1,28 @@ +{ stdenv, lib, fetchFromGitHub, cmake, pkgconfig }: + +stdenv.mkDerivation { + name = "elementary-cmake-modules"; + + src = fetchFromGitHub { + owner = "elementary"; + repo = "cmake-modules"; + rev = "319ec5336e9f05f3f22b886cc2053ef3d4b6599e"; + sha256 = "191hhvdxyqvh9axzndaqld7vrmv7xkn0czks908zhb2zpjhv9rby"; + }; + + prePatch = '' + substituteInPlace CMakeLists.txt \ + --replace ' ''${CMAKE_ROOT}/Modules' " $out/lib/cmake" + ''; + + propagatedBuildInputs = [ cmake pkgconfig ]; + + setupHook = ./setup-hook.sh; + + meta = with lib; { + platforms = platforms.linux ++ platforms.darwin; + homepage = https://github.com/elementary/cmake-modules; + license = licenses.gpl3Plus; + maintainers = [ maintainers.samdroid-apps ]; + }; +} diff --git a/pkgs/development/libraries/elementary-cmake-modules/setup-hook.sh b/pkgs/development/libraries/elementary-cmake-modules/setup-hook.sh new file mode 100644 index 000000000000..6408ac471577 --- /dev/null +++ b/pkgs/development/libraries/elementary-cmake-modules/setup-hook.sh @@ -0,0 +1,4 @@ +_elementaryCMakeEnvHook() { + cmakeFlagsArray+=(-DCMAKE_MODULE_PATH=@out@/lib/cmake) +} +addEnvHooks "$targetOffset" _elementaryCMakeEnvHook diff --git a/pkgs/development/libraries/exempi/default.nix b/pkgs/development/libraries/exempi/default.nix index b486a327466d..96f4af3226b4 100644 --- a/pkgs/development/libraries/exempi/default.nix +++ b/pkgs/development/libraries/exempi/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, expat, zlib, boost, libiconv, darwin }: stdenv.mkDerivation rec { - name = "exempi-2.4.2"; + name = "exempi-2.4.4"; src = fetchurl { url = "http://libopenraw.freedesktop.org/download/${name}.tar.bz2"; - sha256 = "1v665fc7x0yi7x6lzskvd8bd2anf7951svn2vd5384dblmgv43av"; + sha256 = "1c1xxiw9lazdaz4zvrnvcy9pif9l1wib7zy91m48i7a4bnf9mmd2"; }; configureFlags = [ diff --git a/pkgs/development/libraries/farstream/default.nix b/pkgs/development/libraries/farstream/default.nix index 034738813395..ebb581bdbccd 100644 --- a/pkgs/development/libraries/farstream/default.nix +++ b/pkgs/development/libraries/farstream/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, libnice, pkgconfig, pythonPackages, gstreamer, gst-plugins-base -, gst-python, gupnp_igd +, gst-python, gupnp-igd , gst-plugins-good, gst-plugins-bad, gst-libav }: @@ -12,7 +12,7 @@ in stdenv.mkDerivation rec { sha256 = "0249ncd20x5mf884fd8bw75c3118b9fdml837v4fib349xmrqfrb"; }; - buildInputs = [ libnice python pygobject2 gupnp_igd libnice ]; + buildInputs = [ libnice python pygobject2 gupnp-igd libnice ]; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/libraries/flatbuffers/default.nix b/pkgs/development/libraries/flatbuffers/default.nix index add520558ba9..fb74c4ff4d24 100644 --- a/pkgs/development/libraries/flatbuffers/default.nix +++ b/pkgs/development/libraries/flatbuffers/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "flatbuffers-${version}"; - version = "1.4.0"; + version = "1.8.0"; src = fetchFromGitHub { owner = "google"; repo = "flatbuffers"; rev = "v${version}"; - sha256 = "0jsqk49h521d5h4c9gk39a8968g6rcd6520a8knbfc7ssc4028y0"; + sha256 = "1qq8qbv8wkiiizj8s984f17bsbjsrhbs9q1nw1yjgrw0grcxlsi9"; }; buildInputs = [ cmake ]; diff --git a/pkgs/development/libraries/gbenchmark/default.nix b/pkgs/development/libraries/gbenchmark/default.nix index dd16ebd5c886..6745bc1ecf5f 100644 --- a/pkgs/development/libraries/gbenchmark/default.nix +++ b/pkgs/development/libraries/gbenchmark/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "gbenchmark-${version}"; - version = "1.2.0"; + version = "1.3.0"; src = fetchFromGitHub { owner = "google"; repo = "benchmark"; rev = "v${version}"; - sha256 = "1gld3zdxgc0c0466qvnsi70h2ksx8qprjrx008rypdhzp6660m48"; + sha256 = "1qx2dp7y0haj6wfbbfw8hx8sxb8ww0igdfrmmaaxfl0vhckylrxh"; }; buildInputs = [ cmake ]; diff --git a/pkgs/development/libraries/gdk-pixbuf/default.nix b/pkgs/development/libraries/gdk-pixbuf/default.nix index 38c1b6197a5f..9c4296b23864 100644 --- a/pkgs/development/libraries/gdk-pixbuf/default.nix +++ b/pkgs/development/libraries/gdk-pixbuf/default.nix @@ -5,7 +5,7 @@ let ver_maj = "2.36"; ver_min = "7"; # TODO: since 2.36.8 gdk-pixbuf gets configured to use mime-type sniffing, - # which apparently requires access to shared_mime_info files during runtime. + # which apparently requires access to shared-mime-info files during runtime. in stdenv.mkDerivation rec { name = "gdk-pixbuf-${ver_maj}.${ver_min}"; diff --git a/pkgs/development/libraries/gegl/3.0.nix b/pkgs/development/libraries/gegl/3.0.nix index 2bb773a17b8f..03f6054791e4 100644 --- a/pkgs/development/libraries/gegl/3.0.nix +++ b/pkgs/development/libraries/gegl/3.0.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, glib, babl, libpng, cairo, libjpeg, which -, librsvg, pango, gtk, bzip2, json_glib, intltool, autoreconfHook, libraw +, librsvg, pango, gtk, bzip2, json-glib, intltool, autoreconfHook, libraw , libwebp, gnome3 }: stdenv.mkDerivation rec { @@ -26,7 +26,7 @@ stdenv.mkDerivation rec { libraw libwebp gnome3.gexiv2 ]; - propagatedBuildInputs = [ glib json_glib babl ]; # for gegl-3.0.pc + propagatedBuildInputs = [ glib json-glib babl ]; # for gegl-3.0.pc nativeBuildInputs = [ pkgconfig intltool which autoreconfHook ]; diff --git a/pkgs/development/libraries/geoclue/2.0.nix b/pkgs/development/libraries/geoclue/2.0.nix index 483ee39c2da1..66aa3b4a2188 100644 --- a/pkgs/development/libraries/geoclue/2.0.nix +++ b/pkgs/development/libraries/geoclue/2.0.nix @@ -1,5 +1,5 @@ -{ fetchurl, stdenv, intltool, libintlOrEmpty, pkgconfig, glib, json_glib, libsoup, geoip -, dbus, dbus_glib, modemmanager, avahi, glib_networking, wrapGAppsHook +{ fetchurl, stdenv, intltool, libintlOrEmpty, pkgconfig, glib, json-glib, libsoup, geoip +, dbus, dbus-glib, modemmanager, avahi, glib-networking, wrapGAppsHook }: with stdenv.lib; @@ -19,11 +19,11 @@ stdenv.mkDerivation rec { ]; buildInputs = libintlOrEmpty ++ - [ glib json_glib libsoup geoip - dbus dbus_glib avahi + [ glib json-glib libsoup geoip + dbus dbus-glib avahi ] ++ optionals (!stdenv.isDarwin) [ modemmanager ]; - propagatedBuildInputs = [ dbus dbus_glib glib glib_networking ]; + propagatedBuildInputs = [ dbus dbus-glib glib glib-networking ]; preConfigure = '' substituteInPlace configure --replace "-Werror" "" diff --git a/pkgs/development/libraries/geoclue/default.nix b/pkgs/development/libraries/geoclue/default.nix index ff65ca97eb74..bf0af502d017 100644 --- a/pkgs/development/libraries/geoclue/default.nix +++ b/pkgs/development/libraries/geoclue/default.nix @@ -1,5 +1,5 @@ -{ stdenv, fetchurl, dbus, dbus_glib, glib, pkgconfig, libxml2, gnome2, - libxslt, glib_networking }: +{ stdenv, fetchurl, dbus, dbus-glib, glib, pkgconfig, libxml2, gnome2, + libxslt, glib-networking }: stdenv.mkDerivation rec { name = "geoclue-0.12.0"; @@ -11,9 +11,9 @@ stdenv.mkDerivation rec { outputs = [ "out" "dev" ]; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ libxml2 gnome2.GConf libxslt glib_networking ]; + buildInputs = [ libxml2 gnome2.GConf libxslt glib-networking ]; - propagatedBuildInputs = [dbus glib dbus_glib]; + propagatedBuildInputs = [dbus glib dbus-glib]; hardeningDisable = [ "format" ]; diff --git a/pkgs/development/libraries/geoip/default.nix b/pkgs/development/libraries/geoip/default.nix index d93430ac1f51..cb8138dc115e 100644 --- a/pkgs/development/libraries/geoip/default.nix +++ b/pkgs/development/libraries/geoip/default.nix @@ -17,7 +17,7 @@ in stdenv.mkDerivation { nativeBuildInputs = [ autoreconfHook ]; - postPatch = '' + postConfigure = '' find . -name Makefile.in -exec sed -i -r 's#^pkgdatadir\s*=.+$#pkgdatadir = ${dataDir}#' {} \; ''; diff --git a/pkgs/development/libraries/glib-networking/default.nix b/pkgs/development/libraries/glib-networking/default.nix index 87f3c78a82e8..37de039544bc 100644 --- a/pkgs/development/libraries/glib-networking/default.nix +++ b/pkgs/development/libraries/glib-networking/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, glib, intltool, gnutls, libproxy -, gsettings_desktop_schemas }: +, gsettings-desktop-schemas }: let ver_maj = "2.54"; @@ -22,7 +22,9 @@ stdenv.mkDerivation rec { ''; nativeBuildInputs = [ pkgconfig intltool ]; - propagatedBuildInputs = [ glib gnutls libproxy gsettings_desktop_schemas ]; + propagatedBuildInputs = [ glib gnutls libproxy gsettings-desktop-schemas ]; + + NIX_LDFLAGS = stdenv.lib.optionalString stdenv.isDarwin "-lintl"; doCheck = false; # tests need to access the certificates (among other things) diff --git a/pkgs/development/libraries/glib/default.nix b/pkgs/development/libraries/glib/default.nix index f68bd1380052..5d60cf5e633a 100644 --- a/pkgs/development/libraries/glib/default.nix +++ b/pkgs/development/libraries/glib/default.nix @@ -4,7 +4,7 @@ , utillinuxMinimal ? null # this is just for tests (not in closure of any regular package) -, coreutils, dbus_daemon, libxml2, tzdata, desktop_file_utils, shared_mime_info, doCheck ? false +, coreutils, dbus_daemon, libxml2, tzdata, desktop-file-utils, shared-mime-info, doCheck ? false }: with stdenv.lib; @@ -65,7 +65,7 @@ stdenv.mkDerivation rec { buildInputs = [ libelf setupHook pcre ] ++ optionals stdenv.isLinux [ utillinuxMinimal ] # for libmount - ++ optionals doCheck [ tzdata libxml2 desktop_file_utils shared_mime_info ]; + ++ optionals doCheck [ tzdata libxml2 desktop-file-utils shared-mime-info ]; nativeBuildInputs = [ pkgconfig gettext perl python ]; @@ -124,7 +124,7 @@ stdenv.mkDerivation rec { export XDG_CACHE_HOME="$TMP" export XDG_RUNTIME_HOME="$TMP" export HOME="$TMP" - export XDG_DATA_DIRS="${desktop_file_utils}/share:${shared_mime_info}/share" + export XDG_DATA_DIRS="${desktop-file-utils}/share:${shared-mime-info}/share" export G_TEST_DBUS_DAEMON="${dbus_daemon.out}/bin/dbus-daemon" export PATH="$PATH:$(pwd)/gobject" echo "PATH=$PATH" diff --git a/pkgs/development/libraries/glibc/nix-locale-archive-2.27.patch b/pkgs/development/libraries/glibc/nix-locale-archive-2.27.patch index 1b3590db4fdd..39312951fcf9 100644 --- a/pkgs/development/libraries/glibc/nix-locale-archive-2.27.patch +++ b/pkgs/development/libraries/glibc/nix-locale-archive-2.27.patch @@ -9,8 +9,8 @@ diff -Naur glibc-2.27-orig/locale/loadarchive.c glibc-2.27/locale/loadarchive.c +open_locale_archive (void) +{ + int fd = -1; -+ char *versioned_path = getenv ("LOCAL_ARCHIVE_2_27"); -+ char *path = getenv ("LOCAL_ARCHIVE"); ++ char *versioned_path = getenv ("LOCALE_ARCHIVE_2_27"); ++ char *path = getenv ("LOCALE_ARCHIVE"); + if (versioned_path) + fd = __open_nocancel (versioned_path, O_RDONLY|O_LARGEFILE|O_CLOEXEC); + if (path && fd < 0) @@ -54,8 +54,8 @@ diff -Naur glibc-2.27-orig/locale/programs/locale.c glibc-2.27/locale/programs/l +open_locale_archive (void) +{ + int fd = -1; -+ char *versioned_path = getenv ("LOCAL_ARCHIVE_2_27"); -+ char *path = getenv ("LOCAL_ARCHIVE"); ++ char *versioned_path = getenv ("LOCALE_ARCHIVE_2_27"); ++ char *path = getenv ("LOCALE_ARCHIVE"); + if (versioned_path) + fd = open64 (versioned_path, O_RDONLY); + if (path && fd < 0) @@ -92,8 +92,8 @@ diff -Naur glibc-2.27-orig/locale/programs/locarchive.c glibc-2.27/locale/progra +open_locale_archive (const char * archivefname, int flags) +{ + int fd = -1; -+ char *versioned_path = getenv ("LOCAL_ARCHIVE_2_27"); -+ char *path = getenv ("LOCAL_ARCHIVE"); ++ char *versioned_path = getenv ("LOCALE_ARCHIVE_2_27"); ++ char *path = getenv ("LOCALE_ARCHIVE"); + if (versioned_path) + fd = open64 (versioned_path, flags); + if (path && fd < 0) diff --git a/pkgs/development/libraries/glm/0954.nix b/pkgs/development/libraries/glm/0954.nix deleted file mode 100644 index 4eb3497b0392..000000000000 --- a/pkgs/development/libraries/glm/0954.nix +++ /dev/null @@ -1,36 +0,0 @@ -{ stdenv, fetchurl, unzip }: - -stdenv.mkDerivation rec { - name = "glm-0.9.5.4"; - - src = fetchurl { - url = "mirror://sourceforge/project/ogl-math/${name}/${name}.zip"; - sha256 = "0v14xssysy3q1h2mga6rqlz722mwbis4rrx76zmvhjqh17qh4l62"; - }; - - buildInputs = [ unzip ]; - - outputs = [ "out" "doc" ]; - - installPhase = '' - mkdir -p "$out/include" - cp -r glm "$out/include" - - mkdir -p "$doc/share/doc/glm" - cp -r doc/* "$doc/share/doc/glm" - ''; - - meta = with stdenv.lib; { - description = "OpenGL Mathematics library for C++"; - longDescription = '' - OpenGL Mathematics (GLM) is a header only C++ mathematics library for - graphics software based on the OpenGL Shading Language (GLSL) - specification and released under the MIT license. - ''; - homepage = http://glm.g-truc.net/; - license = licenses.mit; - branch = "0.9.5.4"; - platforms = platforms.unix; - maintainers = with stdenv.lib.maintainers; [ fuuzetsu ]; - }; -} diff --git a/pkgs/development/libraries/glm/default.nix b/pkgs/development/libraries/glm/default.nix index 904727ceae63..803f08a7a11c 100644 --- a/pkgs/development/libraries/glm/default.nix +++ b/pkgs/development/libraries/glm/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchzip, cmake }: +{ stdenv, fetchurl, fetchzip, cmake }: stdenv.mkDerivation rec { version = "0.9.8.5"; @@ -15,9 +15,16 @@ stdenv.mkDerivation rec { cmakeConfigureFlags = [ "-DGLM_INSTALL_ENABLE=off" ]; + # fetch newer version of platform.h which correctly supports gcc 7.3 + gcc7PlatformPatch = fetchurl { + url = "https://raw.githubusercontent.com/g-truc/glm/dd48b56e44d699a022c69155c8672caacafd9e8a/glm/simd/platform.h"; + sha256 = "0y91hlbgn5va7ijg5mz823gqkq9hqxl00lwmdwnf8q2g086rplzw"; + }; + postPatch = '' substituteInPlace CMakeLists.txt \ --replace '"''${CMAKE_CURRENT_BINARY_DIR}/''${GLM_INSTALL_CONFIGDIR}' '"''${GLM_INSTALL_CONFIGDIR}' + cp ${gcc7PlatformPatch} glm/simd/platform.h ''; postInstall = '' diff --git a/pkgs/development/libraries/gnu-efi/default.nix b/pkgs/development/libraries/gnu-efi/default.nix index 6691928c021e..a46abe3b4f7c 100644 --- a/pkgs/development/libraries/gnu-efi/default.nix +++ b/pkgs/development/libraries/gnu-efi/default.nix @@ -15,13 +15,14 @@ stdenv.mkDerivation rec { makeFlags = [ "PREFIX=\${out}" - "CC=gcc" - "AS=as" - "LD=ld" - "AR=ar" - "RANLIB=ranlib" - "OBJCOPY=objcopy" - ] ++ stdenv.lib.optional stdenv.isArm "ARCH=arm"; + "CC=${stdenv.cc.targetPrefix}gcc" + "AS=${stdenv.cc.targetPrefix}as" + "LD=${stdenv.cc.targetPrefix}ld" + "AR=${stdenv.cc.targetPrefix}ar" + "RANLIB=${stdenv.cc.targetPrefix}ranlib" + "OBJCOPY=${stdenv.cc.targetPrefix}objcopy" + ] ++ stdenv.lib.optional stdenv.isArm "ARCH=arm" + ++ stdenv.lib.optional stdenv.isAarch64 "ARCH=aarch64"; meta = with stdenv.lib; { description = "GNU EFI development toolchain"; diff --git a/pkgs/development/libraries/gnutls-kdh/generic.nix b/pkgs/development/libraries/gnutls-kdh/generic.nix index e7e0672490d0..472ec83fb02c 100644 --- a/pkgs/development/libraries/gnutls-kdh/generic.nix +++ b/pkgs/development/libraries/gnutls-kdh/generic.nix @@ -1,5 +1,5 @@ { lib, fetchurl, stdenv, zlib, lzo, libtasn1, nettle, pkgconfig, lzip -, guileBindings, guile, perl, gmp, autogen, libidn, p11_kit, unbound, libiconv +, guileBindings, guile, perl, gmp, autogen, libidn, p11-kit, unbound, libiconv , tpmSupport ? true, trousers, nettools, bash, gperftools, gperf, gettext, automake , yacc, texinfo @@ -52,7 +52,7 @@ stdenv.mkDerivation { # systemkey-args.h. enableParallelBuilding = false; - buildInputs = [ lzo lzip nettle libtasn1 libidn p11_kit zlib gmp + buildInputs = [ lzo lzip nettle libtasn1 libidn p11-kit zlib gmp autogen gperftools gperf gettext automake yacc texinfo ] ++ lib.optional doCheck nettools ++ lib.optional (stdenv.isFreeBSD || stdenv.isDarwin) libiconv diff --git a/pkgs/development/libraries/gnutls/generic.nix b/pkgs/development/libraries/gnutls/generic.nix index d2947cd7c6b5..8769584a9f21 100644 --- a/pkgs/development/libraries/gnutls/generic.nix +++ b/pkgs/development/libraries/gnutls/generic.nix @@ -1,5 +1,5 @@ { lib, fetchurl, stdenv, zlib, lzo, libtasn1, nettle, pkgconfig, lzip -, guileBindings, guile, perl, gmp, autogen, libidn, p11_kit, libiconv +, guileBindings, guile, perl, gmp, autogen, libidn, p11-kit, libiconv , tpmSupport ? false, trousers, which, nettools, libunistring , unbound, dns-root-data, gettext @@ -40,7 +40,7 @@ stdenv.mkDerivation { enableParallelBuilding = true; - buildInputs = [ lzo lzip libtasn1 libidn p11_kit zlib gmp autogen libunistring unbound ] + buildInputs = [ lzo lzip libtasn1 libidn p11-kit zlib gmp autogen libunistring unbound ] ++ lib.optional (stdenv.isFreeBSD || stdenv.isDarwin) libiconv ++ lib.optional stdenv.isDarwin gettext ++ lib.optional (tpmSupport && stdenv.isLinux) trousers diff --git a/pkgs/development/libraries/goocanvas/2.x.nix b/pkgs/development/libraries/goocanvas/2.x.nix new file mode 100644 index 000000000000..026f58079f6d --- /dev/null +++ b/pkgs/development/libraries/goocanvas/2.x.nix @@ -0,0 +1,29 @@ +{ stdenv, fetchurl, pkgconfig, gettext, gtk-doc, gobjectIntrospection, python2, gtk3, cairo, glib }: + +let + version = "2.0.4"; +in stdenv.mkDerivation rec { + name = "goocanvas-${version}"; + + outputs = [ "out" "dev" "devdoc" ]; + + src = fetchurl { + url = "mirror://gnome/sources/goocanvas/2.0/${name}.tar.xz"; + sha256 = "141fm7mbqib0011zmkv3g8vxcjwa7hypmq71ahdyhnj2sjvy4a67"; + }; + + nativeBuildInputs = [ pkgconfig gettext gtk-doc python2 ]; + buildInputs = [ gtk3 cairo glib ]; + + configureFlags = [ + "--disable-python" + ]; + + meta = with stdenv.lib; { + description = "Canvas widget for GTK+ based on the the Cairo 2D library"; + homepage = https://wiki.gnome.org/Projects/GooCanvas; + license = licenses.lgpl2; + maintainers = with maintainers; [ ]; + platforms = platforms.unix; + }; +} diff --git a/pkgs/development/libraries/gstreamer/validate/default.nix b/pkgs/development/libraries/gstreamer/validate/default.nix index 47eeb3d32843..1cb5e4f968ef 100644 --- a/pkgs/development/libraries/gstreamer/validate/default.nix +++ b/pkgs/development/libraries/gstreamer/validate/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, gstreamer, gst-plugins-base -, python, gobjectIntrospection, json_glib +, python, gobjectIntrospection, json-glib }: stdenv.mkDerivation rec { @@ -24,7 +24,7 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - python json_glib + python json-glib ]; propagatedBuildInputs = [ gstreamer gst-plugins-base ]; diff --git a/pkgs/development/libraries/gtk+/3.x.nix b/pkgs/development/libraries/gtk+/3.x.nix index 4c377c735717..742106ed695d 100644 --- a/pkgs/development/libraries/gtk+/3.x.nix +++ b/pkgs/development/libraries/gtk+/3.x.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, fetchpatch, pkgconfig, gettext, perl -, expat, glib, cairo, pango, gdk_pixbuf, atk, at_spi2_atk, gobjectIntrospection -, xorg, epoxy, json_glib, libxkbcommon, gmp +, expat, glib, cairo, pango, gdk_pixbuf, atk, at-spi2-atk, gobjectIntrospection +, xorg, epoxy, json-glib, libxkbcommon, gmp , waylandSupport ? stdenv.isLinux, wayland, wayland-protocols , xineramaSupport ? stdenv.isLinux , cupsSupport ? stdenv.isLinux, cups ? null @@ -38,9 +38,9 @@ stdenv.mkDerivation rec { }) ]; - buildInputs = [ libxkbcommon epoxy json_glib ]; + buildInputs = [ libxkbcommon epoxy json-glib ]; propagatedBuildInputs = with xorg; with stdenv.lib; - [ expat glib cairo pango gdk_pixbuf atk at_spi2_atk gnome3.gsettings_desktop_schemas + [ expat glib cairo pango gdk_pixbuf atk at-spi2-atk gnome3.gsettings-desktop-schemas libXrandr libXrender libXcomposite libXi libXcursor libSM libICE ] ++ optionals waylandSupport [ wayland wayland-protocols ] ++ optionals stdenv.isDarwin (with darwin.apple_sdk.frameworks; [ AppKit Cocoa ]) diff --git a/pkgs/development/libraries/gtk-mac-integration/default.nix b/pkgs/development/libraries/gtk-mac-integration/default.nix index f9ce0aa4b81e..0171a4b6833b 100644 --- a/pkgs/development/libraries/gtk-mac-integration/default.nix +++ b/pkgs/development/libraries/gtk-mac-integration/default.nix @@ -1,4 +1,4 @@ -{ stdenv, lib, fetchFromGitHub, autoreconfHook, pkgconfig, glib, gtk_doc, gtk, gobjectIntrospection }: +{ stdenv, lib, fetchFromGitHub, autoreconfHook, pkgconfig, glib, gtk-doc, gtk, gobjectIntrospection }: stdenv.mkDerivation rec { name = "gtk-mac-integration-2.0.8"; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { sha256 = "1fbhnvj0rqc3089ypvgnpkp6ad2rr37v5qk38008dgamb9h7f3qs"; }; - nativeBuildInputs = [ autoreconfHook pkgconfig gtk_doc gobjectIntrospection ]; + nativeBuildInputs = [ autoreconfHook pkgconfig gtk-doc gobjectIntrospection ]; buildInputs = [ glib ]; propagatedBuildInputs = [ gtk ]; diff --git a/pkgs/development/libraries/gvfs/default.nix b/pkgs/development/libraries/gvfs/default.nix index 15e7e736e0c6..22fc6cc19760 100644 --- a/pkgs/development/libraries/gvfs/default.nix +++ b/pkgs/development/libraries/gvfs/default.nix @@ -27,7 +27,7 @@ stdenv.mkDerivation rec { samba libmtp libcap polkit # ToDo: a ligther version of libsoup to have FTP/HTTP support? ] ++ stdenv.lib.optionals gnomeSupport (with gnome; [ - libsoup libgnome_keyring gconf gcr + libsoup libgnome-keyring gconf gcr # ToDo: not working and probably useless until gnome3 from x-updates ]); diff --git a/pkgs/development/libraries/icu/58.nix b/pkgs/development/libraries/icu/58.nix index e5b80f4b2700..f7763ba49da1 100644 --- a/pkgs/development/libraries/icu/58.nix +++ b/pkgs/development/libraries/icu/58.nix @@ -1,4 +1,4 @@ -args @ { stdenv, fetchurl, fetchpatch, fixDarwinDylibNames }: +fetchurl: let keywordFix = fetchurl { url = "http://bugs.icu-project.org/trac/changeset/39484?format=diff"; @@ -11,4 +11,4 @@ import ./base.nix { sha256 = "036shcb3f8bm1lynhlsb4kpjm9s9c2vdiir01vg216rs2l8482ib"; patches = [ keywordFix ]; patchFlags = "-p4"; -} args +} diff --git a/pkgs/development/libraries/icu/60.nix b/pkgs/development/libraries/icu/60.nix new file mode 100644 index 000000000000..e56135b15c62 --- /dev/null +++ b/pkgs/development/libraries/icu/60.nix @@ -0,0 +1,4 @@ +import ./base.nix { + version = "60.2"; + sha256 = "065l3n0q9wqaw8dz20x82srshhm6i987fr9ync5xf9mr6n7ylwzh"; +} diff --git a/pkgs/development/libraries/icu/base.nix b/pkgs/development/libraries/icu/base.nix index 2c8392c8bac8..87551ee6ee03 100644 --- a/pkgs/development/libraries/icu/base.nix +++ b/pkgs/development/libraries/icu/base.nix @@ -1,66 +1,95 @@ { version, sha256, patches ? [], patchFlags ? "" }: -{ stdenv, fetchurl, fetchpatch, fixDarwinDylibNames }: +{ stdenv, fetchurl, fetchpatch, fixDarwinDylibNames + # Cross-compiled icu4c requires a build-root of a native compile +, buildRootOnly ? false, nativeBuildRoot, buildPlatform, hostPlatform +}: let pname = "icu4c"; + + baseAttrs = { + src = fetchurl { + url = "http://download.icu-project.org/files/${pname}/${version}/${pname}-" + + (stdenv.lib.replaceChars ["."] ["_"] version) + "-src.tgz"; + inherit sha256; + }; + + postUnpack = '' + sourceRoot=''${sourceRoot}/source + echo Source root reset to ''${sourceRoot} + ''; + + # https://sourceware.org/glibc/wiki/Release/2.26#Removal_of_.27xlocale.h.27 + postPatch = if (stdenv.hostPlatform.libc == "glibc" || stdenv.hostPlatform.libc == "musl") + then "substituteInPlace i18n/digitlst.cpp --replace '' ''" + else null; # won't find locale_t on darwin + + inherit patchFlags patches; + + preConfigure = '' + sed -i -e "s|/bin/sh|${stdenv.shell}|" configure + + # $(includedir) is different from $(prefix)/include due to multiple outputs + sed -i -e 's|^\(CPPFLAGS = .*\) -I\$(prefix)/include|\1 -I$(includedir)|' config/Makefile.inc.in + '' + stdenv.lib.optionalString stdenv.isArm '' + # From https://archlinuxarm.org/packages/armv7h/icu/files/icudata-stdlibs.patch + sed -e 's/LDFLAGSICUDT=-nodefaultlibs -nostdlib/LDFLAGSICUDT=/' -i config/mh-linux + ''; + + configureFlags = "--disable-debug" + + stdenv.lib.optionalString (stdenv.isFreeBSD || stdenv.isDarwin) " --enable-rpath" + + stdenv.lib.optionalString (buildPlatform != hostPlatform) " --with-cross-build=${nativeBuildRoot}"; + + enableParallelBuilding = true; + + meta = with stdenv.lib; { + description = "Unicode and globalization support library"; + homepage = http://site.icu-project.org/; + maintainers = with maintainers; [ raskin ]; + platforms = platforms.all; + }; + }; + + realAttrs = baseAttrs // { + name = pname + "-" + version; + + outputs = [ "out" "dev" ]; + outputBin = "dev"; + + # FIXME: This fixes dylib references in the dylibs themselves, but + # not in the programs in $out/bin. + buildInputs = stdenv.lib.optional stdenv.isDarwin fixDarwinDylibNames; + + # remove dependency on bootstrap-tools in early stdenv build + postInstall = stdenv.lib.optionalString stdenv.isDarwin '' + sed -i 's/INSTALL_CMD=.*install/INSTALL_CMD=install/' $out/lib/icu/${version}/pkgdata.inc + '' + '' + substituteInPlace "$dev/bin/icu-config" \ + --replace \''${pkglibdir}/Makefile.inc "$dev/lib/icu/Makefile.inc" + ''; + + postFixup = ''moveToOutput lib/icu "$dev" ''; + }; + + buildRootOnlyAttrs = baseAttrs // { + name = pname + "-build-root-" + version; + + preConfigure = baseAttrs.preConfigure + '' + mkdir build + cd build + configureScript=../configure + ''; + + postBuild = '' + cd .. + mv build $out + echo "Doing build-root only, exiting now" >&2 + exit 0 + ''; + }; + + attrs = if buildRootOnly + then buildRootOnlyAttrs + else realAttrs; in -stdenv.mkDerivation { - name = pname + "-" + version; - - src = fetchurl { - url = "http://download.icu-project.org/files/${pname}/${version}/${pname}-" - + (stdenv.lib.replaceChars ["."] ["_"] version) + "-src.tgz"; - inherit sha256; - }; - - outputs = [ "out" "dev" ]; - outputBin = "dev"; - - # FIXME: This fixes dylib references in the dylibs themselves, but - # not in the programs in $out/bin. - buildInputs = stdenv.lib.optional stdenv.isDarwin fixDarwinDylibNames; - - postUnpack = '' - sourceRoot=''${sourceRoot}/source - echo Source root reset to ''${sourceRoot} - ''; - - # https://sourceware.org/glibc/wiki/Release/2.26#Removal_of_.27xlocale.h.27 - postPatch = if (stdenv.hostPlatform.libc == "glibc" || stdenv.hostPlatform.libc == "musl") - then "substituteInPlace i18n/digitlst.cpp --replace '' ''" - else null; # won't find locale_t on darwin - - inherit patchFlags patches; - - preConfigure = '' - sed -i -e "s|/bin/sh|${stdenv.shell}|" configure - - # $(includedir) is different from $(prefix)/include due to multiple outputs - sed -i -e 's|^\(CPPFLAGS = .*\) -I\$(prefix)/include|\1 -I$(includedir)|' config/Makefile.inc.in - '' + stdenv.lib.optionalString stdenv.isArm '' - # From https://archlinuxarm.org/packages/armv7h/icu/files/icudata-stdlibs.patch - sed -e 's/LDFLAGSICUDT=-nodefaultlibs -nostdlib/LDFLAGSICUDT=/' -i config/mh-linux - ''; - - configureFlags = "--disable-debug" + - stdenv.lib.optionalString (stdenv.isFreeBSD || stdenv.isDarwin) " --enable-rpath"; - - # remove dependency on bootstrap-tools in early stdenv build - postInstall = stdenv.lib.optionalString stdenv.isDarwin '' - sed -i 's/INSTALL_CMD=.*install/INSTALL_CMD=install/' $out/lib/icu/${version}/pkgdata.inc - '' + '' - substituteInPlace "$dev/bin/icu-config" \ - --replace \''${pkglibdir}/Makefile.inc "$dev/lib/icu/Makefile.inc" - ''; - - postFixup = ''moveToOutput lib/icu "$dev" ''; - - enableParallelBuilding = true; - - meta = with stdenv.lib; { - description = "Unicode and globalization support library"; - homepage = http://site.icu-project.org/; - maintainers = with maintainers; [ raskin ]; - platforms = platforms.all; - }; -} +stdenv.mkDerivation attrs diff --git a/pkgs/development/libraries/indicator-application/gtk2.nix b/pkgs/development/libraries/indicator-application/gtk2.nix index b4fea7c1fa4a..36b637c62bb2 100644 --- a/pkgs/development/libraries/indicator-application/gtk2.nix +++ b/pkgs/development/libraries/indicator-application/gtk2.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, lib, file , pkgconfig, autoconf -, glib, dbus_glib, json_glib +, glib, dbus-glib, json-glib , gtk2, libindicator-gtk2, libdbusmenu-gtk2, libappindicator-gtk2 }: with lib; @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig autoconf ]; buildInputs = [ - glib dbus_glib json_glib + glib dbus-glib json-glib gtk2 libindicator-gtk2 libdbusmenu-gtk2 libappindicator-gtk2 ]; diff --git a/pkgs/development/libraries/indicator-application/gtk3.nix b/pkgs/development/libraries/indicator-application/gtk3.nix index 03afd6f1e878..3d7c20691ab5 100644 --- a/pkgs/development/libraries/indicator-application/gtk3.nix +++ b/pkgs/development/libraries/indicator-application/gtk3.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, lib, file , pkgconfig, autoconf -, glib, dbus_glib, json_glib +, glib, dbus-glib, json-glib , gtk3, libindicator-gtk3, libdbusmenu-gtk3, libappindicator-gtk3 }: with lib; @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig autoconf ]; buildInputs = [ - glib dbus_glib json_glib + glib dbus-glib json-glib gtk3 libindicator-gtk3 libdbusmenu-gtk3 libappindicator-gtk3 ]; diff --git a/pkgs/development/libraries/json-c/0.11.nix b/pkgs/development/libraries/json-c/0.11.nix index 029921ee08c0..8c4eab9ede6e 100644 --- a/pkgs/development/libraries/json-c/0.11.nix +++ b/pkgs/development/libraries/json-c/0.11.nix @@ -6,6 +6,9 @@ stdenv.mkDerivation rec { url = "https://github.com/json-c/json-c/archive/json-c-0.11-20130402.tar.gz"; sha256 = "1m8fy7lbahv1r7yqbhw4pl057sxmmgjihm1fsvc3h66710s2i24r"; }; + + NIX_CFLAGS_COMPILE = [ "-Wno-error=implicit-fallthrough" ]; + meta = with stdenv.lib; { description = "A JSON implementation in C"; homepage = https://github.com/json-c/json-c/wiki; diff --git a/pkgs/development/libraries/json-c/default.nix b/pkgs/development/libraries/json-c/default.nix index b8c72d9669e0..7317efc53f86 100644 --- a/pkgs/development/libraries/json-c/default.nix +++ b/pkgs/development/libraries/json-c/default.nix @@ -11,6 +11,9 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ autoreconfHook ]; # won't configure without it, no idea why + # probably OK after update: https://github.com/json-c/json-c/pull/365 + NIX_CFLAGS_COMPILE = [ "-Wno-error=implicit-fallthrough" ]; + # compatibility hack (for mypaint at least) postInstall = '' ln -s json-c.pc "$dev/lib/pkgconfig/json.pc" diff --git a/pkgs/development/libraries/jsoncpp/default.nix b/pkgs/development/libraries/jsoncpp/default.nix index 18ea6370634d..1c62d79ed328 100644 --- a/pkgs/development/libraries/jsoncpp/default.nix +++ b/pkgs/development/libraries/jsoncpp/default.nix @@ -5,13 +5,13 @@ }: stdenv.mkDerivation rec { name = "jsoncpp-${version}"; - version = "1.8.0"; + version = "1.8.4"; src = fetchFromGitHub { owner = "open-source-parsers"; repo = "jsoncpp"; rev = version; - sha256 = "1lg22zrjnl10x1bw0wfz72xd2kfbzynyggk8vdwd89mp1g8xjl9d"; + sha256 = "1z0gj7a6jypkijmpknis04qybs1hkd04d1arr3gy89lnxmp6qzlm"; }; /* During darwin bootstrap, we have a cp that doesn't understand the diff --git a/pkgs/development/libraries/kde-frameworks/kcoreaddons.nix b/pkgs/development/libraries/kde-frameworks/kcoreaddons.nix index 6658e4dca100..cd5f2163dd95 100644 --- a/pkgs/development/libraries/kde-frameworks/kcoreaddons.nix +++ b/pkgs/development/libraries/kde-frameworks/kcoreaddons.nix @@ -1,7 +1,7 @@ { mkDerivation, lib, fetchurl, writeScript, extra-cmake-modules, - qtbase, qttools, shared_mime_info + qtbase, qttools, shared-mime-info }: mkDerivation { @@ -11,6 +11,6 @@ mkDerivation { broken = builtins.compareVersions qtbase.version "5.7.0" < 0; }; nativeBuildInputs = [ extra-cmake-modules ]; - buildInputs = [ qttools shared_mime_info ]; + buildInputs = [ qttools shared-mime-info ]; propagatedBuildInputs = [ qtbase ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kservice/default.nix b/pkgs/development/libraries/kde-frameworks/kservice/default.nix index 3ac4f4dc2688..356e6537a4fd 100644 --- a/pkgs/development/libraries/kde-frameworks/kservice/default.nix +++ b/pkgs/development/libraries/kde-frameworks/kservice/default.nix @@ -2,7 +2,7 @@ mkDerivation, lib, copyPathsToStore, bison, extra-cmake-modules, flex, kconfig, kcoreaddons, kcrash, kdbusaddons, kdoctools, ki18n, kwindowsystem, - qtbase, shared_mime_info, + qtbase, shared-mime-info, }: mkDerivation { @@ -14,6 +14,6 @@ mkDerivation { kcrash kdbusaddons ki18n kwindowsystem qtbase ]; propagatedBuildInputs = [ kconfig kcoreaddons ]; - propagatedUserEnvPkgs = [ shared_mime_info ]; # for kbuildsycoca5 + propagatedUserEnvPkgs = [ shared-mime-info ]; # for kbuildsycoca5 patches = copyPathsToStore (lib.readPathsFromFile ./. ./series); } diff --git a/pkgs/development/libraries/keybinder/default.nix b/pkgs/development/libraries/keybinder/default.nix index 5ce1b8ec13cc..5110908e0f27 100644 --- a/pkgs/development/libraries/keybinder/default.nix +++ b/pkgs/development/libraries/keybinder/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, autoconf, automake, libtool, pkgconfig, gnome3 -, gtk_doc, gtk2, python2Packages, lua, libX11, libXext, libXrender, gobjectIntrospection +, gtk-doc, gtk2, python2Packages, lua, libX11, libXext, libXrender, gobjectIntrospection }: let @@ -16,7 +16,7 @@ in stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig ]; buildInputs = [ - autoconf automake libtool gnome3.gnome_common gtk_doc gnome3.gtk3 + autoconf automake libtool gnome3.gnome-common gtk-doc gnome3.gtk3 python pygobject3 pygtk lua libX11 libXext libXrender gobjectIntrospection gtk2 ]; diff --git a/pkgs/development/libraries/keybinder3/default.nix b/pkgs/development/libraries/keybinder3/default.nix index f4158f7edbb4..cf4b85043bb2 100644 --- a/pkgs/development/libraries/keybinder3/default.nix +++ b/pkgs/development/libraries/keybinder3/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub, autoconf, automake, libtool, pkgconfig, gnome3 -, gtk_doc, gtk3, python, lua, libX11, libXext, libXrender, gobjectIntrospection +, gtk-doc, gtk3, python, lua, libX11, libXext, libXrender, gobjectIntrospection }: stdenv.mkDerivation rec { @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig ]; buildInputs = [ - autoconf automake libtool gnome3.gnome_common gtk_doc + autoconf automake libtool gnome3.gnome-common gtk-doc libX11 libXext libXrender gobjectIntrospection gtk3 ]; diff --git a/pkgs/development/libraries/lasso/default.nix b/pkgs/development/libraries/lasso/default.nix index 09001b6a6f08..acd0d35a5f08 100644 --- a/pkgs/development/libraries/lasso/default.nix +++ b/pkgs/development/libraries/lasso/default.nix @@ -1,4 +1,4 @@ -{ stdenv, autoconf, automake, autoreconfHook, fetchurl, glib, gobjectIntrospection, gtk_doc, libtool, libxml2, libxslt, openssl, pkgconfig, python27Packages, xmlsec, zlib }: +{ stdenv, autoconf, automake, autoreconfHook, fetchurl, glib, gobjectIntrospection, gtk-doc, libtool, libxml2, libxslt, openssl, pkgconfig, python27Packages, xmlsec, zlib }: stdenv.mkDerivation rec { @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ autoreconfHook pkgconfig ]; - buildInputs = [ autoconf automake glib gobjectIntrospection gtk_doc libtool libxml2 libxslt openssl python27Packages.six xmlsec zlib ]; + buildInputs = [ autoconf automake glib gobjectIntrospection gtk-doc libtool libxml2 libxslt openssl python27Packages.six xmlsec zlib ]; configurePhase = '' ./configure --with-pkg-config=$PKG_CONFIG_PATH \ diff --git a/pkgs/development/libraries/leatherman/default.nix b/pkgs/development/libraries/leatherman/default.nix index be033c3860cf..44d527e1304b 100644 --- a/pkgs/development/libraries/leatherman/default.nix +++ b/pkgs/development/libraries/leatherman/default.nix @@ -2,10 +2,10 @@ stdenv.mkDerivation rec { name = "leatherman-${version}"; - version = "1.3.0"; + version = "1.4.0"; src = fetchFromGitHub { - sha256 = "1pcbfgq9khlcvxjsqpdshjskwljzawryzps0ickazwm7l3m7hrln"; + sha256 = "0whlyzz0imv4lm69xkwhcd6jzh3s0rzlqjmwimbqz96p4771ivpd"; rev = version; repo = "leatherman"; owner = "puppetlabs"; diff --git a/pkgs/development/libraries/libHX/default.nix b/pkgs/development/libraries/libHX/default.nix index 31dfe6085ee1..7de72ed73a65 100644 --- a/pkgs/development/libraries/libHX/default.nix +++ b/pkgs/development/libraries/libHX/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, autoconf, automake, libtool }: stdenv.mkDerivation rec { - name = "libHX-3.21"; + name = "libHX-3.22"; src = fetchurl { - url = "mirror://sourceforge/libhx/libHX/3.21/${name}.tar.xz"; - sha256 = "0wcr6kbhsw6v4js7q4p7fhli37c39dv1rryjf768rkwshl2z8f6v"; + url = "mirror://sourceforge/libhx/libHX/3.22/${name}.tar.xz"; + sha256 = "18w39j528lyg2026dr11f2xxxphy91cg870nx182wbd8cjlqf86c"; }; patches = []; diff --git a/pkgs/development/libraries/libabw/default.nix b/pkgs/development/libraries/libabw/default.nix index 71a28085541d..187e06239c10 100644 --- a/pkgs/development/libraries/libabw/default.nix +++ b/pkgs/development/libraries/libabw/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "libabw-${version}"; - version = "0.1.1"; + version = "0.1.2"; src = fetchurl { url = "http://dev-www.libreoffice.org/src/libabw/${name}.tar.xz"; - sha256 = "0zi1zj4fpxgpglbbb5n1kg3dmhqq5rpf46lli89r5daavp19iing"; + sha256 = "11949iscdb99f2jplxjd39282jxcrf2fw0sqbh5dl7gqb96r8whb"; }; # Boost 1.59 compatability fix diff --git a/pkgs/development/libraries/libaccounts-glib/default.nix b/pkgs/development/libraries/libaccounts-glib/default.nix index 70d0e9faf845..4bb806b91d8a 100644 --- a/pkgs/development/libraries/libaccounts-glib/default.nix +++ b/pkgs/development/libraries/libaccounts-glib/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitLab, autoconf, automake, glib -, gtk_doc, libtool, libxml2, libxslt, pkgconfig, sqlite }: +, gtk-doc, libtool, libxml2, libxslt, pkgconfig, sqlite }: let version = "1.23"; in stdenv.mkDerivation rec { @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { }; buildInputs = [ glib libxml2 libxslt sqlite ]; - nativeBuildInputs = [ autoconf automake gtk_doc libtool pkgconfig ]; + nativeBuildInputs = [ autoconf automake gtk-doc libtool pkgconfig ]; postPatch = '' NOCONFIGURE=1 ./autogen.sh diff --git a/pkgs/development/libraries/libappindicator/default.nix b/pkgs/development/libraries/libappindicator/default.nix index 7ebd14b51f52..6c87588fd3d7 100644 --- a/pkgs/development/libraries/libappindicator/default.nix +++ b/pkgs/development/libraries/libappindicator/default.nix @@ -2,7 +2,7 @@ { stdenv, fetchurl, lib, file , pkgconfig, autoconf -, glib, dbus_glib, gtkVersion +, glib, dbus-glib, gtkVersion , gtk2 ? null, libindicator-gtk2 ? null, libdbusmenu-gtk2 ? null , gtk3 ? null, libindicator-gtk3 ? null, libdbusmenu-gtk3 ? null , python2Packages, gobjectIntrospection, vala @@ -33,7 +33,7 @@ in stdenv.mkDerivation rec { else [ gtk3 libdbusmenu-gtk3 ]; buildInputs = [ - glib dbus_glib + glib dbus-glib python pygobject2 pygtk gobjectIntrospection vala ] ++ (if gtkVersion == "2" then [ libindicator-gtk2 ] ++ optionals monoSupport [ mono gtk-sharp-2_0 ] diff --git a/pkgs/development/libraries/libaudclient/default.nix b/pkgs/development/libraries/libaudclient/default.nix index 81e32ab2c931..b81eba5252f8 100644 --- a/pkgs/development/libraries/libaudclient/default.nix +++ b/pkgs/development/libraries/libaudclient/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, glib, dbus_glib }: +{ stdenv, fetchurl, pkgconfig, glib, dbus-glib }: stdenv.mkDerivation rec { name = "libaudclient-3.5-rc2"; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ glib dbus_glib ]; + buildInputs = [ glib dbus-glib ]; meta = with stdenv.lib; { description = "Legacy D-Bus client library for Audacious"; diff --git a/pkgs/development/libraries/libbfd/default.nix b/pkgs/development/libraries/libbfd/default.nix index 018239a3e778..ac508908e8f2 100644 --- a/pkgs/development/libraries/libbfd/default.nix +++ b/pkgs/development/libraries/libbfd/default.nix @@ -1,8 +1,10 @@ -{ stdenv -, fetchurl, fetchpatch, gnu-config, autoreconfHook264, bison, binutils-raw +{ stdenv, buildPackages +, fetchurl, fetchpatch, gnu-config, autoreconfHook264, bison , libiberty, zlib }: +let inherit (buildPackages.buildPackages) binutils-raw; in + stdenv.mkDerivation rec { name = "libbfd-${version}"; inherit (binutils-raw.bintools) version src; diff --git a/pkgs/development/libraries/libburn/default.nix b/pkgs/development/libraries/libburn/default.nix index f49c449f9ea3..76977b745197 100644 --- a/pkgs/development/libraries/libburn/default.nix +++ b/pkgs/development/libraries/libburn/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "libburn-${version}"; - version = "1.4.6"; + version = "1.4.8"; src = fetchurl { url = "http://files.libburnia-project.org/releases/${name}.tar.gz"; - sha256 = "0wbh49s3az3sfpai09z1zdgynq7wnwrk31v5589033274nmzldlx"; + sha256 = "19lxnzn8bz70glrrrn2hs43gf5g7gfbcka9rcbckhv1pb7is509y"; }; meta = with stdenv.lib; { diff --git a/pkgs/development/libraries/libcdio/default.nix b/pkgs/development/libraries/libcdio/default.nix index f7596b9c702b..6817d1a888cc 100644 --- a/pkgs/development/libraries/libcdio/default.nix +++ b/pkgs/development/libraries/libcdio/default.nix @@ -1,19 +1,19 @@ { stdenv, fetchurl, libcddb, pkgconfig, ncurses, help2man, libiconv }: stdenv.mkDerivation rec { - name = "libcdio-0.93"; + name = "libcdio-2.0.0"; src = fetchurl { url = "mirror://gnu/libcdio/${name}.tar.bz2"; - sha256 = "1a6x2c5bvpnkn7lhmxkjgz4axmh93m1clrlv41s1wzkc48lnc9zq"; + sha256 = "0jr8ppdm80c533nzmrpz3iffnpc6nhvsria1di9f4jg1l19a03fd"; }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ libcddb ncurses help2man ] ++ stdenv.lib.optional stdenv.isDarwin libiconv; - # Disabled because one test (check_paranoia.sh) fails. - #doCheck = true; + # Disabled due to several spurious test failures. + # doCheck = true; meta = with stdenv.lib; { description = "A library for OS-independent CD-ROM and CD image access"; diff --git a/pkgs/development/libraries/libchamplain/default.nix b/pkgs/development/libraries/libchamplain/default.nix index 514a1fa85343..9f60e724ac42 100644 --- a/pkgs/development/libraries/libchamplain/default.nix +++ b/pkgs/development/libraries/libchamplain/default.nix @@ -1,5 +1,5 @@ { fetchurl, stdenv, pkgconfig, glib, gtk3, cairo, clutter, sqlite -, clutter_gtk, libsoup, gobjectIntrospection /*, libmemphis */ }: +, clutter-gtk, libsoup, gobjectIntrospection /*, libmemphis */ }: stdenv.mkDerivation rec { major = "0.12"; @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig ]; buildInputs = [ gobjectIntrospection ]; - propagatedBuildInputs = [ glib gtk3 cairo clutter_gtk sqlite libsoup ]; + propagatedBuildInputs = [ glib gtk3 cairo clutter-gtk sqlite libsoup ]; meta = with stdenv.lib; { inherit version; diff --git a/pkgs/development/libraries/libchewing/default.nix b/pkgs/development/libraries/libchewing/default.nix index 0521ae8a0400..d3ef799ef605 100644 --- a/pkgs/development/libraries/libchewing/default.nix +++ b/pkgs/development/libraries/libchewing/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec{ name = "libchewing-${version}"; - version = "0.4.0"; + version = "0.5.1"; src = fetchurl { url = "https://github.com/chewing/libchewing/releases/download/v${version}/libchewing-${version}.tar.bz2"; - sha256 = "1j5g5j4w6yp73k03pmsq9n2r0p458hqriq0sd5kisj9xrssbynp5"; + sha256 = "0aqp2vqgxczydpn7pxi7r6xf3l1hgl710f0gbi1k8q7s2lscc24p"; }; buildInputs = [ sqlite ]; diff --git a/pkgs/development/libraries/libconfuse/default.nix b/pkgs/development/libraries/libconfuse/default.nix index 1ef550238d15..d92492eb7f8c 100644 --- a/pkgs/development/libraries/libconfuse/default.nix +++ b/pkgs/development/libraries/libconfuse/default.nix @@ -2,10 +2,10 @@ stdenv.mkDerivation rec { name = "libconfuse-${version}"; - version = "3.0"; + version = "3.2.1"; src = fetchFromGitHub { - sha256 = "0021768bxqdxn84yaipncgi64889zrhc0r4ifmlfxirwq101dgr5"; + sha256 = "1pb74wpg1cxz9hpp0p8i1qq6anaq06mh4xljd8dllm653fxvbjdz"; rev = "v${version}"; repo = "libconfuse"; owner = "martinh"; diff --git a/pkgs/development/libraries/libcouchbase/default.nix b/pkgs/development/libraries/libcouchbase/default.nix index 2fccee0160b3..fb0c2e789f36 100644 --- a/pkgs/development/libraries/libcouchbase/default.nix +++ b/pkgs/development/libraries/libcouchbase/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "libcouchbase-${version}"; - version = "2.7.6"; + version = "2.8.4"; src = fetchFromGitHub { owner = "couchbase"; repo = "libcouchbase"; rev = version; - sha256 = "13g7r0mcmrj37mihj6g1x1ckpaps659c4qwnw3ixrg7p5mb3p41f"; + sha256 = "0i5kmv8grsnh2igvlkgjr8lz3h3yrxh82yxbbdsjfpslv61l0gpi"; }; cmakeFlags = "-DLCB_NO_MOCK=ON"; diff --git a/pkgs/development/libraries/libdap/default.nix b/pkgs/development/libraries/libdap/default.nix index 57b56c372339..fc0221b93889 100644 --- a/pkgs/development/libraries/libdap/default.nix +++ b/pkgs/development/libraries/libdap/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, bison, libuuid, curl, libxml2, flex }: stdenv.mkDerivation rec { - version = "3.18.3"; + version = "3.19.1"; name = "libdap-${version}"; nativeBuildInputs = [ bison flex ]; @@ -9,7 +9,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "http://www.opendap.org/pub/source/${name}.tar.gz"; - sha256 = "0azjf4gjqvp1fdf1wb3s98x52zfy4viq1m3j9lggaidldfinmv8c"; + sha256 = "0gnki93z3kkzp65x7n1kancy7bd503j4qja5fhzvm1gkmi5l65aj"; }; meta = with stdenv.lib; { diff --git a/pkgs/development/libraries/libdbusmenu/default.nix b/pkgs/development/libraries/libdbusmenu/default.nix index c7a6fcc58748..220cc5a2eeb4 100644 --- a/pkgs/development/libraries/libdbusmenu/default.nix +++ b/pkgs/development/libraries/libdbusmenu/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, lib, file , pkgconfig, intltool -, glib, dbus_glib, json_glib -, gobjectIntrospection, vala_0_38, gnome_doc_utils +, glib, dbus-glib, json-glib +, gobjectIntrospection, vala_0_38, gnome-doc-utils , gtkVersion ? null, gtk2 ? null, gtk3 ? null }: with lib; @@ -21,8 +21,8 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig intltool ]; buildInputs = [ - glib dbus_glib json_glib - gobjectIntrospection vala_0_38 gnome_doc_utils + glib dbus-glib json-glib + gobjectIntrospection vala_0_38 gnome-doc-utils ] ++ optional (gtkVersion != null) (if gtkVersion == "2" then gtk2 else gtk3); postPatch = '' diff --git a/pkgs/development/libraries/libffcall/default.nix b/pkgs/development/libraries/libffcall/default.nix index c6482842cacd..513a4dc3d384 100644 --- a/pkgs/development/libraries/libffcall/default.nix +++ b/pkgs/development/libraries/libffcall/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "libffcall-${version}"; - version = "2.0"; + version = "2.1"; src = fetchurl { url = "mirror://gnu/libffcall/libffcall-${version}.tar.gz"; - sha256 = "0v0rh3vawb8z5q40fs3kr2f9zp06n2fq4rr2ww4562nr96sd5aj1"; + sha256 = "0iwcad6w78jp84vd6xaz5fwqm84n3cb42bdf5m5cj5xzpa5zp4d0"; }; enableParallelBuilding = false; diff --git a/pkgs/development/libraries/libffi/default.nix b/pkgs/development/libraries/libffi/default.nix index 1339be451c29..50cf8526c362 100644 --- a/pkgs/development/libraries/libffi/default.nix +++ b/pkgs/development/libraries/libffi/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, fetchpatch, dejagnu, doCheck ? false -, buildPlatform, hostPlatform +, buildPlatform, hostPlatform, autoreconfHook }: stdenv.mkDerivation rec { @@ -20,6 +20,11 @@ stdenv.mkDerivation rec { url = "https://git.alpinelinux.org/cgit/aports/plain/main/libffi/gnu-linux-define.patch?id=bb024fd8ec6f27a76d88396c9f7c5c4b5800d580"; sha256 = "11pvy3xkhyvnjfyy293v51f1xjy3x0azrahv1nw9y9mw8bifa2j2"; }) + ++ stdenv.lib.optional hostPlatform.isRiscV (fetchpatch { + name = "riscv-support.patch"; + url = https://github.com/sorear/libffi-riscv/commit/e46492e8bb1695a19bc1053ed869e6c2bab02ff2.patch; + sha256 = "1vl1vbvdkigs617kckxvj8j4m2cwg62kxm1clav1w5rnw9afxg0y"; + }) ++ stdenv.lib.optionals stdenv.isMips [ (fetchpatch { name = "0001-mips-Use-compiler-internal-define-for-linux.patch"; @@ -37,6 +42,8 @@ stdenv.mkDerivation rec { buildInputs = stdenv.lib.optional doCheck dejagnu; + nativeBuildInputs = stdenv.lib.optional hostPlatform.isRiscV autoreconfHook; + configureFlags = [ "--with-gcc-arch=generic" # no detection of -march= or -mtune= "--enable-pax_emutramp" diff --git a/pkgs/development/libraries/libfilezilla/default.nix b/pkgs/development/libraries/libfilezilla/default.nix index 84e3517835e3..3b27ffc6d386 100644 --- a/pkgs/development/libraries/libfilezilla/default.nix +++ b/pkgs/development/libraries/libfilezilla/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "libfilezilla-${version}"; - version = "0.11.2"; + version = "0.12.1"; src = fetchurl { url = "http://download.filezilla-project.org/libfilezilla/${name}.tar.bz2"; - sha256 = "0wl42yxrha633dbh1vcbhrpsd7sv4zwskbmlpx549ygnzi39krcn"; + sha256 = "1gbqm42dd0m3fvqz3bk53889479dvn8679zp6ba8a9q2br2wkvv0"; }; meta = with stdenv.lib; { diff --git a/pkgs/development/libraries/libgap/default.nix b/pkgs/development/libraries/libgap/default.nix index 9e0510debd02..dec9676d5729 100644 --- a/pkgs/development/libraries/libgap/default.nix +++ b/pkgs/development/libraries/libgap/default.nix @@ -1,11 +1,11 @@ {stdenv, fetchurl, gmp}: stdenv.mkDerivation rec { name = "libgap-${version}"; - version = "4.8.3"; + version = "4.8.6"; # or fetchFromGitHub(owner,repo,rev) or fetchgit(rev) src = fetchurl { url = "http://mirrors.mit.edu/sage/spkg/upstream/libgap/libgap-${version}.tar.gz"; - sha256 = "0ng4wlw7bj63spf4vkdp43v3ja1fp782lxzdsyf51x26z21idrsq"; + sha256 = "1h5fx5a55857w583ql7ly2jl49qyx9mvs7j5abys00ra9gzrpn5v"; }; buildInputs = [gmp]; meta = { diff --git a/pkgs/development/libraries/libgcrypt/default.nix b/pkgs/development/libraries/libgcrypt/default.nix index 45564d64861d..a02aefb0a742 100644 --- a/pkgs/development/libraries/libgcrypt/default.nix +++ b/pkgs/development/libraries/libgcrypt/default.nix @@ -1,4 +1,6 @@ -{ stdenv, fetchurl, gettext, libgpgerror, enableCapabilities ? false, libcap }: +{ stdenv, fetchurl, gettext, libgpgerror, enableCapabilities ? false, libcap +, buildPackages +}: assert enableCapabilities -> stdenv.isLinux; @@ -19,10 +21,19 @@ stdenv.mkDerivation rec { # The build enables -O2 by default for everything else. hardeningDisable = stdenv.lib.optional stdenv.cc.isClang "fortify"; + depsBuildBuild = stdenv.lib.optional stdenv.isCross buildPackages.stdenv.cc; + buildInputs = [ libgpgerror ] ++ stdenv.lib.optional stdenv.isDarwin gettext ++ stdenv.lib.optional enableCapabilities libcap; + preConfigure = if stdenv.isCross then '' + # This is intentional: gpg-error-config is a shell script that will work during the build + mkdir -p "$NIX_BUILD_TOP"/bin + ln -s ${libgpgerror.dev}/bin/gpg-error-config "$NIX_BUILD_TOP/bin" + export PATH="$NIX_BUILD_TOP/bin:$PATH" + '' else null; + # Make sure libraries are correct for .pc and .la files # Also make sure includes are fixed for callers who don't use libgpgcrypt-config postFixup = '' diff --git a/pkgs/development/libraries/libgee/0.6.nix b/pkgs/development/libraries/libgee/0.6.nix deleted file mode 100644 index 51487b41573f..000000000000 --- a/pkgs/development/libraries/libgee/0.6.nix +++ /dev/null @@ -1,27 +0,0 @@ -{ stdenv, fetchurl, pkgconfig, glib }: - -let - ver_maj = "0.6"; - ver_min = "8"; -in -stdenv.mkDerivation rec { - name = "libgee-${ver_maj}.${ver_min}"; - - src = fetchurl { - url = "https://download.gnome.org/sources/libgee/${ver_maj}/${name}.tar.xz"; - sha256 = "1lzmxgz1bcs14ghfp8qqzarhn7s64ayx8c508ihizm3kc5wqs7x6"; - }; - - buildInputs = [ glib ]; - nativeBuildInputs = [ pkgconfig ]; - - doCheck = true; - - meta = with stdenv.lib; { - description = "Utility library providing GObject-based interfaces and classes for commonly used data structures"; - license = licenses.lgpl21Plus; - platforms = platforms.linux; - homepage = http://live.gnome.org/Libgee; - maintainers = with maintainers; [ abbradar ]; - }; -} diff --git a/pkgs/development/libraries/libgee/0.8.nix b/pkgs/development/libraries/libgee/0.8.nix deleted file mode 100644 index 747cb9d4b237..000000000000 --- a/pkgs/development/libraries/libgee/0.8.nix +++ /dev/null @@ -1,27 +0,0 @@ -{ stdenv, fetchurl, pkgconfig, glib }: - -let - ver_maj = "0.8"; - ver_min = "6"; -in -stdenv.mkDerivation rec { - name = "libgee-${ver_maj}.${ver_min}"; - - src = fetchurl { - url = "https://download.gnome.org/sources/libgee/${ver_maj}/${name}.tar.xz"; - sha256 = "1mp3bfghc8qh2v8h2pfhksda22mgy2d5ygm1jr3bir544nr8i4fg"; - }; - - buildInputs = [ glib ]; - nativeBuildInputs = [ pkgconfig ]; - - doCheck = true; - - meta = with stdenv.lib; { - description = "Utility library providing GObject-based interfaces and classes for commonly used data structures"; - license = licenses.lgpl21Plus; - platforms = platforms.linux; - homepage = http://live.gnome.org/Libgee; - maintainers = with maintainers; [ sternenseemann ]; - }; -} diff --git a/pkgs/development/libraries/libgksu/default.nix b/pkgs/development/libraries/libgksu/default.nix index 7bd551e70d56..8961afcd6207 100644 --- a/pkgs/development/libraries/libgksu/default.nix +++ b/pkgs/development/libraries/libgksu/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, pkgconfig, wrapGAppsHook, gtk2, gnome2, gnome3, libstartup_notification, libgtop, perl, perlXMLParser, - autoreconfHook, intltool, gtk_doc, docbook_xsl, xauth, sudo + autoreconfHook, intltool, gtk-doc, docbook_xsl, xauth, sudo }: stdenv.mkDerivation rec { @@ -14,12 +14,12 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ - pkgconfig autoreconfHook intltool gtk_doc docbook_xsl wrapGAppsHook + pkgconfig autoreconfHook intltool gtk-doc docbook_xsl wrapGAppsHook ]; buildInputs = [ gtk2 gnome2.GConf libstartup_notification - gnome3.libgnome_keyring libgtop gnome2.libglade perl perlXMLParser + gnome3.libgnome-keyring libgtop gnome2.libglade perl perlXMLParser ]; enableParallelBuilding = true; diff --git a/pkgs/development/libraries/libgpg-error/default.nix b/pkgs/development/libraries/libgpg-error/default.nix index e6cb62330c4e..5c5824a9930c 100644 --- a/pkgs/development/libraries/libgpg-error/default.nix +++ b/pkgs/development/libraries/libgpg-error/default.nix @@ -1,6 +1,21 @@ -{ stdenv, buildPackages, fetchurl, gettext }: +{ stdenv, buildPackages, fetchurl, gettext +, hostPlatform, genPosixLockObjOnly ? false +}: let + genPosixLockObjOnlyAttrs = stdenv.lib.optionalAttrs genPosixLockObjOnly { + buildPhase = '' + cd src + make gen-posix-lock-obj + ''; -stdenv.mkDerivation rec { + installPhase = '' + mkdir -p $out/bin + install -m755 gen-posix-lock-obj $out/bin + ''; + + outputs = [ "out" ]; + outputBin = "out"; + }; +in stdenv.mkDerivation (rec { name = "libgpg-error-${version}"; version = "1.27"; @@ -9,6 +24,8 @@ stdenv.mkDerivation rec { sha256 = "1li95ni122fzinzlmxbln63nmgij63irxfvi52ws4zfbzv3am4sg"; }; + patches = if hostPlatform.isRiscV then ./riscv.patch else null; + postPatch = '' sed '/BUILD_TIMESTAMP=/s/=.*/=1970-01-01T00:01+0000/' -i ./configure '' + stdenv.lib.optionalString stdenv.hostPlatform.isMusl '' @@ -49,4 +66,4 @@ stdenv.mkDerivation rec { platforms = platforms.all; maintainers = [ maintainers.fuuzetsu maintainers.vrthra ]; }; -} +} // genPosixLockObjOnlyAttrs) diff --git a/pkgs/development/libraries/libgpg-error/riscv.patch b/pkgs/development/libraries/libgpg-error/riscv.patch new file mode 100644 index 000000000000..afc3b9993a43 --- /dev/null +++ b/pkgs/development/libraries/libgpg-error/riscv.patch @@ -0,0 +1,54 @@ +commit b3e9ec5626d474c58e683a41d09576297d4acd3d +Author: Shea Levy +Date: Sat Feb 24 21:12:44 2018 -0500 + + syscfg: Add lock-obj-pub file for riscv64-unknown-linux-gnu. + + * src/syscfg/lock-obj-pub.riscv64-unknown-linux-gnu.h: new. + * src/Makefile.am (lock_obj_pub): Add it. + + Signed-off-by: Shea Levy + +diff --git a/src/Makefile.am b/src/Makefile.am +index 4446612..5a8cc43 100644 +--- a/src/Makefile.in ++++ b/src/Makefile.in +@@ -65,6 +65,7 @@ lock_obj_pub = \ + syscfg/lock-obj-pub.powerpc64-unknown-linux-gnu.h \ + syscfg/lock-obj-pub.powerpc64le-unknown-linux-gnu.h \ + syscfg/lock-obj-pub.powerpc-unknown-linux-gnuspe.h \ ++ syscfg/lock-obj-pub.riscv64-unknown-linux-gnu.h \ + syscfg/lock-obj-pub.s390x-ibm-linux-gnu.h \ + syscfg/lock-obj-pub.sh3-unknown-linux-gnu.h \ + syscfg/lock-obj-pub.sh4-unknown-linux-gnu.h \ +diff --git a/src/syscfg/lock-obj-pub.riscv64-unknown-linux-gnu.h b/src/syscfg/lock-obj-pub.riscv64-unknown-linux-gnu.h +new file mode 100644 +index 0000000..8aab9d6 +--- /dev/null ++++ b/src/syscfg/lock-obj-pub.riscv64-unknown-linux-gnu.h +@@ -0,0 +1,25 @@ ++## lock-obj-pub.riscv64-unknown-linux-gnu.h ++## File created by gen-posix-lock-obj - DO NOT EDIT ++## To be included by mkheader into gpg-error.h ++ ++typedef struct ++{ ++ long _vers; ++ union { ++ volatile char _priv[40]; ++ long _x_align; ++ long *_xp_align; ++ } u; ++} gpgrt_lock_t; ++ ++#define GPGRT_LOCK_INITIALIZER {1,{{0,0,0,0,0,0,0,0, \ ++ 0,0,0,0,0,0,0,0, \ ++ 0,0,0,0,0,0,0,0, \ ++ 0,0,0,0,0,0,0,0, \ ++ 0,0,0,0,0,0,0,0}}} ++## ++## Local Variables: ++## mode: c ++## buffer-read-only: t ++## End: ++## diff --git a/pkgs/development/libraries/libgsystem/default.nix b/pkgs/development/libraries/libgsystem/default.nix index eaf2eb170956..e29b3ed89dea 100644 --- a/pkgs/development/libraries/libgsystem/default.nix +++ b/pkgs/development/libraries/libgsystem/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, autoreconfHook, pkgconfig, gtk_doc, gobjectIntrospection +{ stdenv, fetchFromGitHub, autoreconfHook, pkgconfig, gtk-doc, gobjectIntrospection , glib, attr, systemd }: @@ -20,7 +20,7 @@ stdenv.mkDerivation { }; nativeBuildInputs = [ - autoreconfHook pkgconfig gtk_doc gobjectIntrospection + autoreconfHook pkgconfig gtk-doc gobjectIntrospection ]; propagatedBuildInputs = [ glib attr systemd ]; diff --git a/pkgs/development/libraries/libguestfs/default.nix b/pkgs/development/libraries/libguestfs/default.nix index e659b31d9745..d7d0fbe8094d 100644 --- a/pkgs/development/libraries/libguestfs/default.nix +++ b/pkgs/development/libraries/libguestfs/default.nix @@ -9,16 +9,16 @@ assert javaSupport -> jdk != null; stdenv.mkDerivation rec { name = "libguestfs-${version}"; - version = "1.36.3"; + version = "1.38.0"; appliance = fetchurl { - url = "http://libguestfs.org/download/binaries/appliance/appliance-1.36.1.tar.xz"; - sha256 = "1klvr13gpg615hgjvviwpxlj839lbwwsrq7x100qg5zmmjfhl125"; + url = "http://libguestfs.org/download/binaries/appliance/appliance-1.38.0.tar.xz"; + sha256 = "05481qxgidakga871yb5rgpyci2jaxmplmkh6y79anfh5m19nzhy"; }; src = fetchurl { - url = "http://libguestfs.org/download/1.36-stable/libguestfs-${version}.tar.gz"; - sha256 = "0dhb69b7svjgnrmbyvizdz5vsgsrr95ypz0qvp3kz83jyj6sa76m"; + url = "http://libguestfs.org/download/1.38-stable/libguestfs-${version}.tar.gz"; + sha256 = "0cgapiad3x5ggwm097mq62hng3bv91p5gmrikrb6adfaasr1l6m3"; }; nativeBuildInputs = [ pkgconfig ]; @@ -44,7 +44,7 @@ stdenv.mkDerivation rec { # some scripts hardcore /usr/bin/env which is not available in the build env patchShebangs . ''; - configureFlags = [ "--disable-appliance" "--disable-daemon" ] + configureFlags = [ "--disable-appliance" "--disable-daemon" "--with-distro=NixOS" ] ++ stdenv.lib.optionals (!javaSupport) [ "--disable-java" "--without-java" ]; patches = [ ./libguestfs-syms.patch ]; NIX_CFLAGS_COMPILE="-I${libxml2.dev}/include/libxml2/"; diff --git a/pkgs/development/libraries/libhttpseverywhere/default.nix b/pkgs/development/libraries/libhttpseverywhere/default.nix index c3405148242c..f5bdb2069d99 100644 --- a/pkgs/development/libraries/libhttpseverywhere/default.nix +++ b/pkgs/development/libraries/libhttpseverywhere/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, meson, ninja, valadoc -, gnome3, glib, json_glib, libarchive, libsoup, gobjectIntrospection }: +, gnome3, glib, json-glib, libarchive, libsoup, gobjectIntrospection }: stdenv.mkDerivation rec { major = "0.6"; @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ gnome3.vala gobjectIntrospection meson ninja pkgconfig valadoc ]; - buildInputs = [ glib gnome3.libgee json_glib libsoup libarchive ]; + buildInputs = [ glib gnome3.libgee json-glib libsoup libarchive ]; mesonFlags = "-Denable_valadoc=true"; diff --git a/pkgs/development/libraries/libiberty/default.nix b/pkgs/development/libraries/libiberty/default.nix index 6608a3393b12..516e6bbbe88c 100644 --- a/pkgs/development/libraries/libiberty/default.nix +++ b/pkgs/development/libraries/libiberty/default.nix @@ -1,4 +1,6 @@ -{ stdenv, fetchurl, gcc, staticBuild ? false }: +{ stdenv, buildPackages, fetchurl, staticBuild ? false }: + +let inherit (buildPackages.buildPackages) gcc; in stdenv.mkDerivation rec { name = "libiberty-${gcc.cc.version}"; diff --git a/pkgs/development/libraries/libiconv/default.nix b/pkgs/development/libraries/libiconv/default.nix index 21abf7f8c079..b55fc18cb69b 100644 --- a/pkgs/development/libraries/libiconv/default.nix +++ b/pkgs/development/libraries/libiconv/default.nix @@ -1,5 +1,6 @@ { fetchurl, stdenv, lib , buildPlatform, hostPlatform +, enableStatic ? stdenv.hostPlatform.useAndroidPrebuilt }: # assert !stdenv.isLinux || hostPlatform != buildPlatform; # TODO: improve on cross @@ -19,14 +20,8 @@ stdenv.mkDerivation rec { sed '/^_GL_WARN_ON_USE (gets/d' -i srclib/stdio.in.h ''; - configureFlags = - lib.optional stdenv.isFreeBSD "--with-pic"; - - crossAttrs = { - # Disable stripping to avoid "libiconv.a: Archive has no index" (MinGW). - dontStrip = true; - dontCrossStrip = true; - }; + configureFlags = lib.optional stdenv.isFreeBSD "--with-pic" + ++ lib.optional enableStatic "--enable-static"; meta = { description = "An iconv(3) implementation"; diff --git a/pkgs/development/libraries/libidn/default.nix b/pkgs/development/libraries/libidn/default.nix index 147d6bac2f99..54d669f1913b 100644 --- a/pkgs/development/libraries/libidn/default.nix +++ b/pkgs/development/libraries/libidn/default.nix @@ -10,7 +10,8 @@ stdenv.mkDerivation rec { outputs = [ "bin" "dev" "out" "info" "devdoc" ]; - doCheck = !stdenv.isDarwin && !stdenv.hostPlatform.isMusl; + # broken with gcc-7 + #doCheck = !stdenv.isDarwin && !stdenv.hostPlatform.isMusl; hardeningDisable = [ "format" ]; diff --git a/pkgs/development/libraries/libindicate/default.nix b/pkgs/development/libraries/libindicate/default.nix index 9c7e48f8f6a8..445a505b68c8 100644 --- a/pkgs/development/libraries/libindicate/default.nix +++ b/pkgs/development/libraries/libindicate/default.nix @@ -2,9 +2,9 @@ { stdenv, fetchurl, lib, file , pkgconfig, autoconf -, glib, dbus_glib, libdbusmenu-glib +, glib, dbus-glib, libdbusmenu-glib , gtkVersion, gtk2 ? null, gtk3 ? null -, pythonPackages, gobjectIntrospection, vala, gnome_doc_utils +, pythonPackages, gobjectIntrospection, vala, gnome-doc-utils , monoSupport ? false, mono ? null, gtk-sharp-2_0 ? null }: @@ -24,10 +24,10 @@ in stdenv.mkDerivation rec { sha256 = "10am0ymajx633b33anf6b79j37k61z30v9vaf5f9fwk1x5cw1q21"; }; - nativeBuildInputs = [ pkgconfig autoconf gobjectIntrospection vala gnome_doc_utils ]; + nativeBuildInputs = [ pkgconfig autoconf gobjectIntrospection vala gnome-doc-utils ]; buildInputs = [ - glib dbus_glib libdbusmenu-glib + glib dbus-glib libdbusmenu-glib python pygobject2 pygtk ] ++ (if gtkVersion == "2" then [ gtk2 ] ++ optionals monoSupport [ mono gtk-sharp-2_0 ] diff --git a/pkgs/development/libraries/libinfinity/default.nix b/pkgs/development/libraries/libinfinity/default.nix index 835c7d6f2262..9bbb8f0e129d 100644 --- a/pkgs/development/libraries/libinfinity/default.nix +++ b/pkgs/development/libraries/libinfinity/default.nix @@ -12,10 +12,10 @@ let in stdenv.mkDerivation rec { - name = "libinfinity-0.6.5"; + name = "libinfinity-0.7.1"; src = fetchurl { url = "http://releases.0x539.de/libinfinity/${name}.tar.gz"; - sha256 = "1idsxb6rz4i55g3vi2sv7hmm57psbccpb57yc4jgphaq6ydgqsr6"; + sha256 = "1jw2fhrcbpyz99bij07iyhy9ffyqdn87vl8cb1qz897y3f2f0vk2"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/libraries/libiodbc/default.nix b/pkgs/development/libraries/libiodbc/default.nix index 267d3097c997..738c11161955 100644 --- a/pkgs/development/libraries/libiodbc/default.nix +++ b/pkgs/development/libraries/libiodbc/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, pkgconfig, gtk2, useGTK ? false }: stdenv.mkDerivation rec { - name = "libiodbc-3.52.8"; + name = "libiodbc-3.52.12"; src = fetchurl { url = "mirror://sourceforge/iodbc/${name}.tar.gz"; - sha256 = "16hjb6fcval85gnkgkxfhw4c5h3pgf86awyh8p2bhnnvzc0ma5hq"; + sha256 = "0qpvklgr1lcn5g8xbz7fbc9rldqf9r8s6xybhqj20m4sglxgziai"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/libraries/libisoburn/default.nix b/pkgs/development/libraries/libisoburn/default.nix index e113d62c5f7d..6e7764176091 100644 --- a/pkgs/development/libraries/libisoburn/default.nix +++ b/pkgs/development/libraries/libisoburn/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "libisoburn-${version}"; - version = "1.4.4"; + version = "1.4.8"; src = fetchurl { url = "http://files.libburnia-project.org/releases/${name}.tar.gz"; - sha256 = "1mn2dwkwdrdcjnd59czxali7r5nlxdx92clyxnsfpmw20f9s20kv"; + sha256 = "19d53j17pn18vfxxqqlqwam5lm21ljyp8nai5434068g7x3m1kwi"; }; buildInputs = [ attr zlib libburn libisofs ]; diff --git a/pkgs/development/libraries/libisofs/default.nix b/pkgs/development/libraries/libisofs/default.nix index a0205fb234ca..d0217a908b9f 100644 --- a/pkgs/development/libraries/libisofs/default.nix +++ b/pkgs/development/libraries/libisofs/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "libisofs-${version}"; - version = "1.4.6"; + version = "1.4.8"; src = fetchurl { url = "http://files.libburnia-project.org/releases/${name}.tar.gz"; - sha256 = "02m5g6lbmmkh2xc5xzq5zaf3ma6v31gls66aj886b3cq9qw0paql"; + sha256 = "0scvqb72qq24wcg814p1iw1dknldl21hr1hxsc1wy9vc6vgyk7fw"; }; buildInputs = [ attr zlib ]; diff --git a/pkgs/development/libraries/libivykis/default.nix b/pkgs/development/libraries/libivykis/default.nix index eac919612f0b..ed595505fae1 100644 --- a/pkgs/development/libraries/libivykis/default.nix +++ b/pkgs/development/libraries/libivykis/default.nix @@ -3,11 +3,11 @@ stdenv.mkDerivation rec { name = "libivykis-${version}"; - version = "0.41"; + version = "0.42.1"; src = fetchurl { url = "mirror://sourceforge/libivykis/${version}/ivykis-${version}.tar.gz"; - sha256 = "1igk3svf36i5xgb6ipc507xpj6zjm4xi9j1j2cdqaachllwlb4rc"; + sha256 = "0c90cfpxipw2m8i3ajr7vy7lb8gvcz2kh5n8sd542zphr4na8whq"; }; nativeBuildInputs = [ autoreconfHook pkgconfig ]; diff --git a/pkgs/development/libraries/liblogging/default.nix b/pkgs/development/libraries/liblogging/default.nix index 4667a6e76014..dd852e1de85a 100644 --- a/pkgs/development/libraries/liblogging/default.nix +++ b/pkgs/development/libraries/liblogging/default.nix @@ -3,11 +3,11 @@ }: stdenv.mkDerivation rec { - name = "liblogging-1.0.5"; + name = "liblogging-1.0.6"; src = fetchurl { url = "http://download.rsyslog.com/liblogging/${name}.tar.gz"; - sha256 = "02w94j344q0ywlj4mdf9fnzwggdsn3j1yn43sdlsddvr29lw239i"; + sha256 = "14xz00mq07qmcgprlj5b2r21ljgpa4sbwmpr6jm2wrf8wms6331k"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/libraries/libltc/default.nix b/pkgs/development/libraries/libltc/default.nix index ec306e0f7c34..dfc2402a7ec6 100644 --- a/pkgs/development/libraries/libltc/default.nix +++ b/pkgs/development/libraries/libltc/default.nix @@ -1,11 +1,11 @@ {stdenv, fetchurl}: stdenv.mkDerivation { - name = "libltc-1.1.4"; + name = "libltc-1.3.0"; src = fetchurl { - url = https://github.com/x42/libltc/releases/download/v1.1.4/libltc-1.1.4.tar.gz; - sha256 = "0xas0zbi11nhq15al6cxn0iwa563s6fcz01hw0np1clh25h4773x"; + url = https://github.com/x42/libltc/releases/download/v1.3.0/libltc-1.3.0.tar.gz; + sha256 = "0p7fgp44i9d1lrgbk5zj3sm5yzavx428zn36xb3bl7y65c2xxcda"; }; meta = with stdenv.lib; { diff --git a/pkgs/development/libraries/libmaxminddb/default.nix b/pkgs/development/libraries/libmaxminddb/default.nix index 9355c43642a4..f1b15a91ccac 100644 --- a/pkgs/development/libraries/libmaxminddb/default.nix +++ b/pkgs/development/libraries/libmaxminddb/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "libmaxminddb-${version}"; - version = "1.2.0"; + version = "1.3.2"; src = fetchurl { url = meta.homepage + "/releases/download/${version}/${name}.tar.gz"; - sha256 = "0dxdyw6sxxmpzk2a96qp323r5kdmw7vm6m0l5a8gr52gf7nmks0z"; + sha256 = "1w60yq26x3yr3abxk7fwqqaggw8dc98595jdliaa3kyqdfm83y76"; }; meta = with stdenv.lib; { diff --git a/pkgs/development/libraries/libmd/default.nix b/pkgs/development/libraries/libmd/default.nix index 8951017a4b5c..2da8e5ebf738 100644 --- a/pkgs/development/libraries/libmd/default.nix +++ b/pkgs/development/libraries/libmd/default.nix @@ -3,11 +3,11 @@ stdenv.mkDerivation rec { name = "${pname}-${version}"; pname = "libmd"; - version = "0.0.0"; + version = "1.0.0"; src = fetchurl { url = "https://archive.hadrons.org/software/${pname}/${pname}-${version}.tar.xz"; - sha256 = "121s73pgbqsnmy6xblbrkj9y44c5zzzpf2hcmh6zvcvg4dk26gzx"; + sha256 = "1iv45npzv0gncjgcpx5m081861zdqxw667ysghqb8721yrlyl6pj"; }; nativeBuildInputs = [ autoreconfHook ]; diff --git a/pkgs/development/libraries/libmediainfo/default.nix b/pkgs/development/libraries/libmediainfo/default.nix index 25a597ea4daf..7999cc1dff4d 100644 --- a/pkgs/development/libraries/libmediainfo/default.nix +++ b/pkgs/development/libraries/libmediainfo/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, autoreconfHook, pkgconfig, libzen, zlib }: stdenv.mkDerivation rec { - version = "17.10"; + version = "17.12"; name = "libmediainfo-${version}"; src = fetchurl { url = "https://mediaarea.net/download/source/libmediainfo/${version}/libmediainfo_${version}.tar.xz"; - sha256 = "00m1b4m37c9lm16yhh63p5pidg2sr3qvsw36672lklmcv3y1ic30"; + sha256 = "0lm4454ynp0msgqm3s0mnxqxql6i1ank35jvff5swnaxvwsbp0ml"; }; nativeBuildInputs = [ autoreconfHook pkgconfig ]; diff --git a/pkgs/development/libraries/libmemcached/default.nix b/pkgs/development/libraries/libmemcached/default.nix index 6d895290e2c2..15e642832df6 100644 --- a/pkgs/development/libraries/libmemcached/default.nix +++ b/pkgs/development/libraries/libmemcached/default.nix @@ -23,6 +23,8 @@ stdenv.mkDerivation rec { buildInputs = [ libevent ]; propagatedBuildInputs = [ cyrus_sasl ]; + NIX_CFLAGS_COMPILE = [ "-fpermissive"/*gcc7*/ ]; + meta = with stdenv.lib; { homepage = http://libmemcached.org; description = "Open source C/C++ client library and tools for the memcached server"; diff --git a/pkgs/development/libraries/libmodbus/default.nix b/pkgs/development/libraries/libmodbus/default.nix index f6a816ef96f6..10bd7af7fadd 100644 --- a/pkgs/development/libraries/libmodbus/default.nix +++ b/pkgs/development/libraries/libmodbus/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl }: stdenv.mkDerivation rec { - name = "libmodbus-3.0.6"; + name = "libmodbus-3.1.4"; src = fetchurl { url = "http://libmodbus.org/releases/${name}.tar.gz"; - sha256 = "1dkijjv3dq0c5vc5z5f1awm8dlssbwg6ivsnvih22pkm1zqn6v84"; + sha256 = "0drnil8bzd4n4qb0wv3ilm9zvypxvwmzd65w96d6kfm7x6q65j68"; }; meta = with stdenv.lib; { diff --git a/pkgs/development/libraries/libmtp/default.nix b/pkgs/development/libraries/libmtp/default.nix index 9cac26bf2be1..dca80bbbe881 100644 --- a/pkgs/development/libraries/libmtp/default.nix +++ b/pkgs/development/libraries/libmtp/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, pkgconfig, libusb1 }: stdenv.mkDerivation rec { - name = "libmtp-1.1.13"; + name = "libmtp-1.1.14"; src = fetchurl { url = "mirror://sourceforge/libmtp/${name}.tar.gz"; - sha256 = "0h3dv9py5mmvxhfxmkr8ky4s80hgq3d66cmrfnnnlcdwpwpy0kj9"; + sha256 = "1s0jyhypxmj0j8s003ba1n74x63h1rw8am9q4z2ip3xyjvid65rq"; }; outputs = [ "bin" "dev" "out" ]; diff --git a/pkgs/development/libraries/libmwaw/default.nix b/pkgs/development/libraries/libmwaw/default.nix index e1ac659683c9..35137a09cd9c 100644 --- a/pkgs/development/libraries/libmwaw/default.nix +++ b/pkgs/development/libraries/libmwaw/default.nix @@ -3,11 +3,11 @@ let s = # Generated upstream information rec { baseName="libmwaw"; - version="0.3.10"; + version="0.3.13"; name="${baseName}-${version}"; - hash="087j6kx03ggvqwpl944nnf75qkvi9bag8b0z59phg66gbz0s0imj"; - url="https://netcologne.dl.sourceforge.net/project/libmwaw/libmwaw/libmwaw-0.3.10/libmwaw-0.3.10.tar.xz"; - sha256="087j6kx03ggvqwpl944nnf75qkvi9bag8b0z59phg66gbz0s0imj"; + hash="1sjs3nc39im232h5bf81w3il8ivd7w2bc2qssxf7k74g8hlcfmfv"; + url="mirror://sourceforge/libmwaw/libmwaw/libmwaw-0.3.13/libmwaw-0.3.13.tar.xz"; + sha256="1sjs3nc39im232h5bf81w3il8ivd7w2bc2qssxf7k74g8hlcfmfv"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/libraries/libmx/default.nix b/pkgs/development/libraries/libmx/default.nix index 897a769b014d..42bcf5b64740 100644 --- a/pkgs/development/libraries/libmx/default.nix +++ b/pkgs/development/libraries/libmx/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl , libtool, pkgconfig, automake, autoconf, intltool -, glib, gobjectIntrospection, gtk2, gtk_doc -, clutter, clutter_gtk +, glib, gobjectIntrospection, gtk2, gtk-doc +, clutter, clutter-gtk }: stdenv.mkDerivation rec { @@ -36,7 +36,7 @@ stdenv.mkDerivation rec { automake autoconf libtool intltool gobjectIntrospection glib - gtk2 gtk_doc clutter clutter_gtk + gtk2 gtk-doc clutter clutter-gtk ]; # patch to resolve GL errors diff --git a/pkgs/development/libraries/libnice/default.nix b/pkgs/development/libraries/libnice/default.nix index 7e9ae1608d2b..c7967c3fb6fc 100644 --- a/pkgs/development/libraries/libnice/default.nix +++ b/pkgs/development/libraries/libnice/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, glib, gupnp_igd, gst_all_1, gnutls }: +{ stdenv, fetchurl, pkgconfig, glib, gupnp-igd, gst_all_1, gnutls }: stdenv.mkDerivation rec { name = "libnice-0.1.14"; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig ]; buildInputs = [ gst_all_1.gstreamer gst_all_1.gst-plugins-base gnutls ]; - propagatedBuildInputs = [ glib gupnp_igd ]; + propagatedBuildInputs = [ glib gupnp-igd ]; meta = { homepage = https://nice.freedesktop.org/wiki/; diff --git a/pkgs/development/libraries/libofx/default.nix b/pkgs/development/libraries/libofx/default.nix index 77c049949564..1c8f33d82f72 100644 --- a/pkgs/development/libraries/libofx/default.nix +++ b/pkgs/development/libraries/libofx/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, opensp, pkgconfig, libxml2, curl }: stdenv.mkDerivation rec { - name = "libofx-0.9.10"; + name = "libofx-0.9.12"; src = fetchurl { url = "mirror://sourceforge/libofx/${name}.tar.gz"; - sha256 = "15gnbh4mszfxk70srdcjkdykk7dbhzqxi3pxgh48a9zg8i4nmqjl"; + sha256 = "0wvkgffq9qjhjrggg8r1nbhmw65j3lcl4y4cdpmmkrqiz9ia0py1"; }; configureFlags = [ "--with-opensp-includes=${opensp}/include/OpenSP" ]; diff --git a/pkgs/development/libraries/libosinfo/default.nix b/pkgs/development/libraries/libosinfo/default.nix index a0924e791e3b..0175e21bbc72 100644 --- a/pkgs/development/libraries/libosinfo/default.nix +++ b/pkgs/development/libraries/libosinfo/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, intltool, gobjectIntrospection, gtk_doc, docbook_xsl +{ stdenv, fetchurl, pkgconfig, intltool, gobjectIntrospection, gtk-doc, docbook_xsl , glib, libsoup, libxml2, libxslt, check, curl, perl, hwdata, osinfo-db, vala ? null }: @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { outputs = [ "out" "dev" "devdoc" ]; nativeBuildInputs = [ - pkgconfig vala intltool gobjectIntrospection gtk_doc docbook_xsl + pkgconfig vala intltool gobjectIntrospection gtk-doc docbook_xsl ] ++ stdenv.lib.optionals doCheck checkInputs; checkInputs = [ check curl perl ]; buildInputs = [ glib libsoup libxml2 libxslt ]; diff --git a/pkgs/development/libraries/libpfm/default.nix b/pkgs/development/libraries/libpfm/default.nix index 34b09d45044d..a74d838e2eb6 100644 --- a/pkgs/development/libraries/libpfm/default.nix +++ b/pkgs/development/libraries/libpfm/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl }: stdenv.mkDerivation rec { - version = "4.8.0"; + version = "4.9.0"; name = "libpfm-${version}"; src = fetchurl { url = "mirror://sourceforge/perfmon2/libpfm4/${name}.tar.gz"; - sha256 = "0s6gcvrhj2h928cqc8399189annif7yl74k6wda446r0fdx7i4wi"; + sha256 = "1qp4g4n6dw42p2w5rkwzdb7ynk8h7g5vg01ybpmvxncgwa7bw3yv"; }; installFlags = "DESTDIR=\${out} PREFIX= LDCONFIG=true"; diff --git a/pkgs/development/libraries/libpsl/default.nix b/pkgs/development/libraries/libpsl/default.nix index b1100d00f3e0..f5c92e11c357 100644 --- a/pkgs/development/libraries/libpsl/default.nix +++ b/pkgs/development/libraries/libpsl/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, autoreconfHook, docbook_xsl, gtk_doc, icu +{ stdenv, fetchFromGitHub, autoreconfHook, docbook_xsl, gtk-doc, icu , libxslt, pkgconfig, python2 }: let @@ -25,7 +25,7 @@ in stdenv.mkDerivation rec { }; buildInputs = [ icu libxslt ]; - nativeBuildInputs = [ autoreconfHook docbook_xsl gtk_doc pkgconfig python2 ]; + nativeBuildInputs = [ autoreconfHook docbook_xsl gtk-doc pkgconfig python2 ]; postPatch = '' substituteInPlace src/psl.c --replace bits/stat.h sys/stat.h diff --git a/pkgs/development/libraries/libpst/default.nix b/pkgs/development/libraries/libpst/default.nix index b19008449abe..cb30a890f401 100644 --- a/pkgs/development/libraries/libpst/default.nix +++ b/pkgs/development/libraries/libpst/default.nix @@ -2,11 +2,11 @@ pkgconfig, bzip2, xmlto, gettext, imagemagick, doxygen }: stdenv.mkDerivation rec { - name = "libpst-0.6.70"; + name = "libpst-0.6.71"; src = fetchurl { url = "http://www.five-ten-sg.com/libpst/packages/${name}.tar.gz"; - sha256 = "1m378vxh1sf9ry8k11x773xpy5f6cab5gkzqglz0jp9hc431r60r"; + sha256 = "130nksrwgi3ih32si5alvxwzd5kmlg8yi7p03w0h7w9r3b90i4pv"; }; nativeBuildInputs = [ autoreconfHook pkgconfig ]; diff --git a/pkgs/development/libraries/libqalculate/default.nix b/pkgs/development/libraries/libqalculate/default.nix index 89b71c1855da..cdc2a6570022 100644 --- a/pkgs/development/libraries/libqalculate/default.nix +++ b/pkgs/development/libraries/libqalculate/default.nix @@ -3,11 +3,11 @@ stdenv.mkDerivation rec { name = "libqalculate-${version}"; - version = "2.1.0"; + version = "2.2.1"; src = fetchurl { url = "https://github.com/Qalculate/libqalculate/archive/v${version}.tar.gz"; - sha256 = "036f284bssvavyz6pgpcdafvxa59h2wdrh8xl7nmxxnw9v7n2n7l"; + sha256 = "0bam1xvw4n5sm3g4kmggz2aha34xaw64kw15wl2lbkd2yzdjdm4l"; }; outputs = [ "out" "dev" "doc" ]; diff --git a/pkgs/development/libraries/libre/default.nix b/pkgs/development/libraries/libre/default.nix index d65fdc833960..ebe765a0d0d4 100644 --- a/pkgs/development/libraries/libre/default.nix +++ b/pkgs/development/libraries/libre/default.nix @@ -1,10 +1,10 @@ {stdenv, fetchurl, zlib, openssl}: stdenv.mkDerivation rec { - version = "0.5.6"; + version = "0.5.7"; name = "libre-${version}"; src = fetchurl { url = "http://www.creytiv.com/pub/re-${version}.tar.gz"; - sha256 = "0sfz5c7b05crahblanrrvwca092qaqzhjkbkva58jbqnmlk9h4d3"; + sha256 = "0f8h224xfzvnb2ngvhxz8gzxqjlkkfr6d0nj8zqivzr81ihibk2x"; }; buildInputs = [ zlib openssl ]; makeFlags = [ "USE_ZLIB=1" "USE_OPENSSL=1" "PREFIX=$(out)" ] diff --git a/pkgs/development/libraries/librelp/default.nix b/pkgs/development/libraries/librelp/default.nix index adc00b56a287..5db5d2b59651 100644 --- a/pkgs/development/libraries/librelp/default.nix +++ b/pkgs/development/libraries/librelp/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, pkgconfig, gnutls, zlib }: stdenv.mkDerivation rec { - name = "librelp-1.2.12"; + name = "librelp-1.2.14"; src = fetchurl { url = "http://download.rsyslog.com/librelp/${name}.tar.gz"; - sha256 = "1mvvxqfsfg96rb6xv3fw7mcsqmyfnsb74sc53gnhpcpp4h2p6m83"; + sha256 = "0marms2np729ck0x0hsj1bdmi0ly57pl7pfspwrqld9n8cd29xhi"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/libraries/librep/default.nix b/pkgs/development/libraries/librep/default.nix index c74a7981458d..5b3beda1eb8b 100644 --- a/pkgs/development/libraries/librep/default.nix +++ b/pkgs/development/libraries/librep/default.nix @@ -7,12 +7,12 @@ with stdenv.lib; stdenv.mkDerivation rec { name = "librep-${version}"; - version = "0.92.6"; + version = "0.92.7"; sourceName = "librep_${version}"; src = fetchurl { url = "http://download.tuxfamily.org/librep/${sourceName}.tar.xz"; - sha256 = "1k6c0hmyzxh8459r790slh9vv9vwy9d7w3nlmrqypbx9mk855hgy"; + sha256 = "1bmcjl1x1rdh514q9z3hzyjmjmwwwkziipjpjsl301bwmiwrd8a8"; }; nativeBuildInputs = [ autoreconfHook pkgconfig ]; diff --git a/pkgs/development/libraries/librevenge/default.nix b/pkgs/development/libraries/librevenge/default.nix index 3523eb5c37bc..2c6e792ae8ce 100644 --- a/pkgs/development/libraries/librevenge/default.nix +++ b/pkgs/development/libraries/librevenge/default.nix @@ -21,11 +21,10 @@ stdenv.mkDerivation { inherit (s) url sha256; }; - # Clang generates warnings in Boost's header files + # Clang and gcc-7 generate warnings, and # -Werror causes these warnings to be interpreted as errors # Simplest solution: disable -Werror - configureFlags = if stdenv.cc.isClang - then [ "--disable-werror" ] else null; + configureFlags = [ "--disable-werror" ]; # Fix an issue with boost 1.59 # This is fixed upstream so please remove this when updating diff --git a/pkgs/development/libraries/libsass/default.nix b/pkgs/development/libraries/libsass/default.nix index 0ad02c190c11..e1c50bee75ab 100644 --- a/pkgs/development/libraries/libsass/default.nix +++ b/pkgs/development/libraries/libsass/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "libsass-${version}"; - version = "3.4.8"; + version = "3.4.9"; src = fetchurl { url = "https://github.com/sass/libsass/archive/${version}.tar.gz"; - sha256 = "0gq0mg42sq2nxiv25fh37frlr0iyqamh7shv83qixnqklqpkfi13"; + sha256 = "0f4mj91zzdzah7fxkdg3dnrimk9ip7czl4g26f32zgifz1nrqgjs"; }; patchPhase = '' diff --git a/pkgs/development/libraries/libsecret/default.nix b/pkgs/development/libraries/libsecret/default.nix index 75438e00570e..a116e2c0babd 100644 --- a/pkgs/development/libraries/libsecret/default.nix +++ b/pkgs/development/libraries/libsecret/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, glib, pkgconfig, intltool, libxslt, docbook_xsl, gtk_doc +{ stdenv, fetchurl, glib, pkgconfig, intltool, libxslt, docbook_xsl, gtk-doc , libgcrypt, gobjectIntrospection, vala_0_38 }: let version = "0.18.5"; diff --git a/pkgs/development/libraries/libskk/default.nix b/pkgs/development/libraries/libskk/default.nix index 5e36d0688694..521391b1bef8 100644 --- a/pkgs/development/libraries/libskk/default.nix +++ b/pkgs/development/libraries/libskk/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, fetchFromGitHub, libtool, gettext, pkgconfig, - vala, gnome_common, gobjectIntrospection, - libgee, json_glib, skk-dicts }: + vala, gnome-common, gobjectIntrospection, + libgee, json-glib, skk-dicts }: stdenv.mkDerivation rec { name = "libskk-${version}"; @@ -15,8 +15,8 @@ stdenv.mkDerivation rec { }; buildInputs = [ skk-dicts ]; - nativeBuildInputs = [ vala gnome_common gobjectIntrospection libtool gettext pkgconfig ]; - propagatedBuildInputs = [ libgee json_glib ]; + nativeBuildInputs = [ vala gnome-common gobjectIntrospection libtool gettext pkgconfig ]; + propagatedBuildInputs = [ libgee json-glib ]; preConfigure = '' ./autogen.sh diff --git a/pkgs/development/libraries/libsolv/default.nix b/pkgs/development/libraries/libsolv/default.nix index 480891e98af9..f775316a2a01 100644 --- a/pkgs/development/libraries/libsolv/default.nix +++ b/pkgs/development/libraries/libsolv/default.nix @@ -1,14 +1,14 @@ { stdenv, fetchFromGitHub, cmake, zlib, expat, rpm, db }: stdenv.mkDerivation rec { - rev = "0.6.23"; + rev = "0.6.32"; name = "libsolv-${rev}"; src = fetchFromGitHub { inherit rev; owner = "openSUSE"; repo = "libsolv"; - sha256 = "08ba7yx0br421lk6zf5mp0yl6nznkmc2vbka20qwm2lx5f0a25xg"; + sha256 = "0gqvnnc1s5n0yj82ia6w2wjhhn8hpl6wm4lki2kzvjqjgla45fnq"; }; cmakeFlags = "-DENABLE_RPMMD=true -DENABLE_RPMDB=true -DENABLE_PUBKEY=true -DENABLE_RPMDB_BYRPMHEADER=true"; diff --git a/pkgs/development/libraries/libsoup/default.nix b/pkgs/development/libraries/libsoup/default.nix index e8d48bf668b3..b67e41a0dc6e 100644 --- a/pkgs/development/libraries/libsoup/default.nix +++ b/pkgs/development/libraries/libsoup/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, fetchpatch, glib, libxml2, pkgconfig -, gnomeSupport ? true, libgnome_keyring3, sqlite, glib_networking, gobjectIntrospection +, gnomeSupport ? true, libgnome-keyring3, sqlite, glib-networking, gobjectIntrospection , valaSupport ? true, vala_0_38 , libintlOrEmpty , intltool, python }: @@ -37,10 +37,10 @@ stdenv.mkDerivation { ++ stdenv.lib.optionals valaSupport [ vala_0_38 ]; nativeBuildInputs = [ pkgconfig ]; propagatedBuildInputs = [ glib libxml2 gobjectIntrospection ] - ++ stdenv.lib.optionals gnomeSupport [ libgnome_keyring3 ]; - passthru.propagatedUserEnvPackages = [ glib_networking.out ]; + ++ stdenv.lib.optionals gnomeSupport [ libgnome-keyring3 ]; + passthru.propagatedUserEnvPackages = [ glib-networking.out ]; - # glib_networking is a runtime dependency, not a compile-time dependency + # glib-networking is a runtime dependency, not a compile-time dependency configureFlags = "--disable-tls-check" + " --enable-vala=${if valaSupport then "yes" else "no"}" + stdenv.lib.optionalString (!gnomeSupport) " --without-gnome"; diff --git a/pkgs/development/libraries/libspatialindex/default.nix b/pkgs/development/libraries/libspatialindex/default.nix index 660d7e16310f..fe0acbfc538d 100644 --- a/pkgs/development/libraries/libspatialindex/default.nix +++ b/pkgs/development/libraries/libspatialindex/default.nix @@ -1,13 +1,13 @@ { stdenv, fetchurl }: -let version = "1.8.1"; in +let version = "1.8.5"; in stdenv.mkDerivation rec { name = "libspatialindex-${version}"; src = fetchurl { url = "http://download.osgeo.org/libspatialindex/spatialindex-src-${version}.tar.gz"; - sha256 = "1ay1kxn4baccd0cqx466v7fn8c8gcfbhlnd5mbdnd7s4aw0ix88j"; + sha256 = "1vxzm7kczwnb6qdmc0hb00z8ykx11zk3sb68gc7rch4vrfi4dakw"; }; enableParallelBuilding = true; diff --git a/pkgs/development/libraries/libtermkey/default.nix b/pkgs/development/libraries/libtermkey/default.nix index 429cc5d9f180..7261fb7b6b74 100644 --- a/pkgs/development/libraries/libtermkey/default.nix +++ b/pkgs/development/libraries/libtermkey/default.nix @@ -3,11 +3,11 @@ stdenv.mkDerivation rec { name = "libtermkey-${version}"; - version = "0.19"; + version = "0.20"; src = fetchzip { url = "http://www.leonerd.org.uk/code/libtermkey/libtermkey-${version}.tar.gz"; - sha256 = "0v85h0zacd5lqwkykl2ms4009x8mfidzb6jr4dsq4gh7kwm54w56"; + sha256 = "1i5a2zangq61ba1vdkag34ig5g4gzccldccdbcmqmk93saa6lkbx"; }; makeFlags = [ "PREFIX=$(out)" ] diff --git a/pkgs/development/libraries/libtomcrypt/default.nix b/pkgs/development/libraries/libtomcrypt/default.nix index 46f3a982b0c7..e30f699f103d 100644 --- a/pkgs/development/libraries/libtomcrypt/default.nix +++ b/pkgs/development/libraries/libtomcrypt/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "libtomcrypt-${version}"; - version = "1.18.0"; + version = "1.18.1"; src = fetchurl { url = "https://github.com/libtom/libtomcrypt/releases/download/v${version}/crypt-${version}.tar.xz"; - sha256 = "0ymqi0zf5gzn8pq4mnylwgg6pskml2v1p9rsjrqspyja65mgb7fs"; + sha256 = "053z0jzyvf6c9929phlh2p0ybx289s34g7nii5hnjigxzcs3mhap"; }; nativeBuildInputs = [ libtool ]; diff --git a/pkgs/development/libraries/libtoxcore/default.nix b/pkgs/development/libraries/libtoxcore/default.nix index a742be3c1e4d..16fca9ce3d39 100644 --- a/pkgs/development/libraries/libtoxcore/default.nix +++ b/pkgs/development/libraries/libtoxcore/default.nix @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - libsodium libmsgpack ncurses + libsodium libmsgpack ncurses libconfig ] ++ stdenv.lib.optionals (!stdenv.isArm) [ libopus libvpx diff --git a/pkgs/development/libraries/libunique/3.x.nix b/pkgs/development/libraries/libunique/3.x.nix index b0066fa75f22..1a4f16046fc1 100644 --- a/pkgs/development/libraries/libunique/3.x.nix +++ b/pkgs/development/libraries/libunique/3.x.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig -, dbus, dbus_glib, gtk3, gobjectIntrospection +, dbus, dbus-glib, gtk3, gobjectIntrospection , gtkdoc, docbook_xml_dtd_45, docbook_xsl , libxslt, libxml2 }: @@ -18,7 +18,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ dbus dbus_glib gtk3 gobjectIntrospection gtkdoc docbook_xml_dtd_45 docbook_xsl libxslt libxml2 ]; + buildInputs = [ dbus dbus-glib gtk3 gobjectIntrospection gtkdoc docbook_xml_dtd_45 docbook_xsl libxslt libxml2 ]; meta = { homepage = https://wiki.gnome.org/Attic/LibUnique; diff --git a/pkgs/development/libraries/libunique/default.nix b/pkgs/development/libraries/libunique/default.nix index a5adaa9ac179..2bb53dd2b97f 100644 --- a/pkgs/development/libraries/libunique/default.nix +++ b/pkgs/development/libraries/libunique/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, glib, gtk2, dbus_glib }: +{ stdenv, fetchurl, pkgconfig, glib, gtk2, dbus-glib }: stdenv.mkDerivation rec { name = "libunique-1.1.6"; @@ -13,10 +13,11 @@ stdenv.mkDerivation rec { ./1.1.6-fix-test.patch ./1.1.6-G_CONST_RETURN.patch ./1.1.6-include-terminator.patch - ]; + ] + ++ [ ./gcc7-bug.patch ]; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ glib gtk2 dbus_glib ]; + buildInputs = [ glib gtk2 dbus-glib ]; # don't make deprecated usages hard errors preBuild = ''substituteInPlace unique/dbus/Makefile --replace -Werror ""''; @@ -24,7 +25,7 @@ stdenv.mkDerivation rec { doCheck = true; meta = { - homepage = http://live.gnome.org/LibUnique; + homepage = https://wiki.gnome.org/Attic/LibUnique; description = "A library for writing single instance applications"; license = stdenv.lib.licenses.lgpl21; platforms = stdenv.lib.platforms.linux; diff --git a/pkgs/development/libraries/libunique/gcc7-bug.patch b/pkgs/development/libraries/libunique/gcc7-bug.patch new file mode 100644 index 000000000000..2b0587510bc0 --- /dev/null +++ b/pkgs/development/libraries/libunique/gcc7-bug.patch @@ -0,0 +1,18 @@ +gcc-7 newly detects this class of bugs. +In this particular case it's clear that the inention was +to detect if the string is non-NULL *and* non-empty. + + +diff --git a/unique/uniqueapp.c b/unique/uniqueapp.c +index b40a86c..66a7226 100644 +--- a/unique/uniqueapp.c ++++ b/unique/uniqueapp.c +@@ -176,7 +176,7 @@ set_startup_id (UniqueBackend *backend, + { + gchar *id; + +- if (startup_id && startup_id != '\0') ++ if (startup_id && *startup_id != '\0') + id = g_strdup (startup_id); + else + { diff --git a/pkgs/development/libraries/liburcu/default.nix b/pkgs/development/libraries/liburcu/default.nix index 0c88f9871041..aa106baf8152 100644 --- a/pkgs/development/libraries/liburcu/default.nix +++ b/pkgs/development/libraries/liburcu/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, perl }: stdenv.mkDerivation rec { - version = "0.9.5"; + version = "0.10.1"; name = "liburcu-${version}"; src = fetchurl { url = "http://lttng.org/files/urcu/userspace-rcu-${version}.tar.bz2"; - sha256 = "19iq7985rhvbrj99hlmbyq2wjrkhssvigh5454mhaprn3c7jaj6r"; + sha256 = "01pbg67qy5hcssy2yi0ckqapzfclgdq93li2rmzw4pa3wh5j42cw"; }; nativeBuildInputs = stdenv.lib.optional doCheck perl; diff --git a/pkgs/development/libraries/libwebsockets/default.nix b/pkgs/development/libraries/libwebsockets/default.nix index 98f3ea1679cb..fa35f7546f56 100644 --- a/pkgs/development/libraries/libwebsockets/default.nix +++ b/pkgs/development/libraries/libwebsockets/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "libwebsockets-${version}"; - version = "2.3.0"; + version = "2.4.1"; src = fetchFromGitHub { owner = "warmcat"; repo = "libwebsockets"; rev = "v${version}"; - sha256 = "1hv2b5r6sg42xnqhm4ysjvyiz3cqpfmwaqm33vpbx0k7arj4ixvy"; + sha256 = "0d3xqdq3hpk5l9cg4dqkba6jm6620y6knqqywya703662spmj2xw"; }; buildInputs = [ cmake openssl zlib libuv ]; diff --git a/pkgs/development/libraries/libwpg/default.nix b/pkgs/development/libraries/libwpg/default.nix index 57dfe34132f5..9d262910e14f 100644 --- a/pkgs/development/libraries/libwpg/default.nix +++ b/pkgs/development/libraries/libwpg/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, pkgconfig, libwpd, zlib, librevenge }: stdenv.mkDerivation rec { - name = "libwpg-0.3.0"; + name = "libwpg-0.3.2"; src = fetchurl { url = "mirror://sourceforge/libwpg/${name}.tar.xz"; - sha256 = "097jx8a638fwwfrzf6v29r1yhc34rq9526py7wf0ck2z4fcr2w3g"; + sha256 = "0cwc5zkp210c661l0bvk6q21jg9ak5g8gmy578w5fgfnjymz3yjp"; }; buildInputs = [ libwpd zlib librevenge ]; diff --git a/pkgs/development/libraries/libwps/default.nix b/pkgs/development/libraries/libwps/default.nix index 73fe5b55ab45..84748d601a64 100644 --- a/pkgs/development/libraries/libwps/default.nix +++ b/pkgs/development/libraries/libwps/default.nix @@ -2,16 +2,18 @@ stdenv.mkDerivation rec { name = "libwps-${version}"; - version = "0.4.3"; + version = "0.4.8"; src = fetchurl { url = "mirror://sourceforge/libwps/${name}.tar.bz2"; - sha256 = "0v1a0hj96i4jhb5833336s4zcslzb6md5cnmnrvgywx8cmw40c0c"; + sha256 = "163gdqaanqfs767aj6zdzagqldngn8i7f0hbmhhxlxr0wmvx6c9q"; }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ boost librevenge zlib ]; + NIX_CFLAGS_COMPILE = [ "-Wno-error=implicit-fallthrough" ]; # newly detected by gcc-7 + meta = with stdenv.lib; { homepage = http://libwps.sourceforge.net/; description = "Microsoft Works document format import filter library"; diff --git a/pkgs/development/libraries/libxcomp/default.nix b/pkgs/development/libraries/libxcomp/default.nix index 68f8c44a8ec8..7ed2d2fd6300 100644 --- a/pkgs/development/libraries/libxcomp/default.nix +++ b/pkgs/development/libraries/libxcomp/default.nix @@ -2,10 +2,10 @@ stdenv.mkDerivation rec { name = "libxcomp-${version}"; - version = "3.5.0.32"; + version = "3.5.0.33"; src = fetchurl { - sha256 = "02n5bdc1jsq999agb4w6dmdj5l2wlln2lka84qz6rpswwc59zaxm"; + sha256 = "17qjsd6v2ldpfmyjrkdnlq4qk05hz5l6qs54g8h0glzq43w28f74"; url = "http://code.x2go.org/releases/source/nx-libs/nx-libs-${version}-lite.tar.gz"; }; diff --git a/pkgs/development/libraries/libzmf/default.nix b/pkgs/development/libraries/libzmf/default.nix index e20aa514aa2a..6050a7080df9 100644 --- a/pkgs/development/libraries/libzmf/default.nix +++ b/pkgs/development/libraries/libzmf/default.nix @@ -3,11 +3,11 @@ stdenv.mkDerivation rec { name = "${pname}-${version}"; pname = "libzmf"; - version = "0.0.1"; + version = "0.0.2"; src = fetchurl { url = "http://dev-www.libreoffice.org/src/libzmf/${name}.tar.xz"; - sha256 = "0yp5l1b90xim506zmr3ljkn3qkvbc7qk3dnwq1snxdpr57m37xga"; + sha256 = "08mg5kmkjrmqrd8j5rkzw9vdqlvibhb1ynp6bmfxnzq5rcq1l197"; }; buildInputs = [boost icu libpng librevenge zlib cppunit]; diff --git a/pkgs/development/libraries/live555/default.nix b/pkgs/development/libraries/live555/default.nix index e0f84f5080df..5d63dd770664 100644 --- a/pkgs/development/libraries/live555/default.nix +++ b/pkgs/development/libraries/live555/default.nix @@ -2,14 +2,14 @@ # Based on https://projects.archlinux.org/svntogit/packages.git/tree/trunk/PKGBUILD let - version = "2016.02.09"; + version = "2018.02.12"; in stdenv.mkDerivation { name = "live555-${version}"; src = fetchurl { # the upstream doesn't provide a stable URL url = "mirror://sourceforge/slackbuildsdirectlinks/live.${version}.tar.gz"; - sha256 = "02z2f8z5cy0ajnh9pgar40lsxdknfw5cbyw52138hxnpr6adrvak"; + sha256 = "08860q07hfiln44d6qaasmfalf4hb9na5jsfd4yps6jn4r54xxwx"; }; postPatch = "sed 's,/bin/rm,rm,g' -i genMakefiles" diff --git a/pkgs/development/libraries/log4cpp/default.nix b/pkgs/development/libraries/log4cpp/default.nix index 96cbbb770b4c..d2918c87f335 100644 --- a/pkgs/development/libraries/log4cpp/default.nix +++ b/pkgs/development/libraries/log4cpp/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl }: stdenv.mkDerivation rec { - name = "log4cpp-1.1.1"; + name = "log4cpp-1.1.3"; src = fetchurl { url = "mirror://sourceforge/log4cpp/${name}.tar.gz"; - sha256 = "1l5yz5rfzzv6g3ynrj14mxfsk08cp5h1ssr7d74hjs0accrg7arm"; + sha256 = "07gmr3jyaf2239n9sp6h7hwdz1pv7b7aka8n06gmr2fnlmaymfrc"; }; enableParallelBuilding = true; diff --git a/pkgs/development/libraries/menu-cache/default.nix b/pkgs/development/libraries/menu-cache/default.nix index a490aa1e4451..c92b6a4e7287 100644 --- a/pkgs/development/libraries/menu-cache/default.nix +++ b/pkgs/development/libraries/menu-cache/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, glib, pkgconfig, libfm-extra }: -let name = "menu-cache-1.0.2"; +let name = "menu-cache-1.1.0"; in stdenv.mkDerivation { inherit name; src = fetchurl { url = "mirror://sourceforge/lxde/${name}.tar.xz"; - sha256 = "1m8j40npykfcfqs43kc0fmksal2jfmfi8lnb3mq3xy1lvvrfv0vg"; + sha256 = "1iry4zlpppww8qai2cw4zid4081hh7fz8nzsp5lqyffbkm2yn0pd"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/libraries/mp4v2/default.nix b/pkgs/development/libraries/mp4v2/default.nix index 736c31b442a5..a5542ebb659a 100644 --- a/pkgs/development/libraries/mp4v2/default.nix +++ b/pkgs/development/libraries/mp4v2/default.nix @@ -8,11 +8,19 @@ stdenv.mkDerivation rec { sha256 = "0f438bimimsvxjbdp4vsr8hjw2nwggmhaxgcw07g2z361fkbj683"; }; - # From Handbrake - # mp4v2 doesn't seem to be actively maintained any more :-/ patches = [ + # From Handbrake + # mp4v2 doesn't seem to be actively maintained any more :-/ ./A02-meaningful-4gb-warning.patch + + (fetchurl { + name = "gcc-7.patch"; + url = "https://src.fedoraproject.org/cgit/rpms/libmp4v2.git/plain/" + + "0004-Fix-GCC7-build.patch?id=d7aeedabb"; + sha256 = "0sbn0il7lmk77yrjyb4f0a3z3h8gsmdkscvz5n9hmrrrhrwf672w"; + }) ]; + # `faac' expects `mp4.h'. postInstall = "ln -s mp4v2/mp4v2.h $out/include/mp4.h"; diff --git a/pkgs/development/libraries/nanomsg/default.nix b/pkgs/development/libraries/nanomsg/default.nix index 6c0e633459bf..99c9c5f16001 100644 --- a/pkgs/development/libraries/nanomsg/default.nix +++ b/pkgs/development/libraries/nanomsg/default.nix @@ -1,14 +1,14 @@ { stdenv, cmake, fetchFromGitHub }: stdenv.mkDerivation rec { - version = "1.0.0"; + version = "1.1.2"; name = "nanomsg-${version}"; src = fetchFromGitHub { owner = "nanomsg"; repo = "nanomsg"; rev = version; - sha256 = "1iqlmvz5k8m4srb120g3kfkmm1w2p16hyxmx2asvihd21j285fmw"; + sha256 = "1zvs91afsg61azfv5fldv84gnhf76w3yndkdvpvaprlacxbxdvf5"; }; buildInputs = [ cmake ]; diff --git a/pkgs/development/libraries/ncurses/default.nix b/pkgs/development/libraries/ncurses/default.nix index 0dd7b37e1a66..f8a35e41cd61 100644 --- a/pkgs/development/libraries/ncurses/default.nix +++ b/pkgs/development/libraries/ncurses/default.nix @@ -3,6 +3,8 @@ , abiVersion , mouseSupport ? false , unicode ? true +, enableStatic ? stdenv.hostPlatform.useAndroidPrebuilt +, withCxx ? !stdenv.hostPlatform.useAndroidPrebuilt , gpm @@ -11,23 +13,21 @@ }: stdenv.mkDerivation rec { - version = if abiVersion == "5" then "5.9" else "6.0-20171125"; - name = "ncurses-${version}"; + version = "6.0-20171125"; + name = "ncurses-${version}" + lib.optionalString (abiVersion == "5") "-abi5-compat"; - src = fetchurl (if abiVersion == "5" then { - url = "mirror://gnu/ncurses/${name}.tar.gz"; - sha256 = "0fsn7xis81za62afan0vvm38bvgzg5wfmv1m86flqcj0nj7jjilh"; - } else { + src = fetchurl { urls = [ - "ftp://ftp.invisible-island.net/ncurses/current/${name}.tgz" - "https://invisible-mirror.net/archives/ncurses/current/${name}.tgz" + # Remove this mirror on next upgrade, it's only needed because upstream took ncurses-6.0-20171125.tgz down! + "http://bld1.alpinelinux.org/distfiles/v3.5/ncurses-${version}.tgz" + + "ftp://ftp.invisible-island.net/ncurses/current/ncurses-${version}.tgz" + "https://invisible-mirror.net/archives/ncurses/current/ncurses-${version}.tgz" ]; sha256 = "11adzj0k82nlgpfrflabvqn2m7fmhp2y6pd7ivmapynxqb9vvb92"; - }); + }; - # Unnecessarily complicated in order to avoid mass-rebuilds - patches = lib.optional (!stdenv.cc.isClang || abiVersion == "5") ./clang.patch - ++ lib.optional (stdenv.cc.isGNU && abiVersion == "5") ./gcc-5.patch; + patches = lib.optional (!stdenv.cc.isClang) ./clang.patch; outputs = [ "out" "dev" "man" ]; setOutputFlags = false; # some aren't supported @@ -37,7 +37,10 @@ stdenv.mkDerivation rec { "--without-debug" "--enable-pc-files" "--enable-symlinks" - ] ++ lib.optional unicode "--enable-widec"; + ] ++ lib.optional unicode "--enable-widec" + ++ lib.optional enableStatic "--enable-static" + ++ lib.optional (!withCxx) "--without-cxx" + ++ lib.optional (abiVersion == "5") "--with-abi-version=5"; # Only the C compiler, and explicitly not C++ compiler needs this flag on solaris: CFLAGS = lib.optionalString stdenv.isSunOS "-D_XOPEN_SOURCE_EXTENDED"; diff --git a/pkgs/development/libraries/ncurses/gcc-5.patch b/pkgs/development/libraries/ncurses/gcc-5.patch deleted file mode 100644 index 2448229b88e1..000000000000 --- a/pkgs/development/libraries/ncurses/gcc-5.patch +++ /dev/null @@ -1,46 +0,0 @@ -https://bugs.gentoo.org/545114 - -extracted from the upstream change (which had many unrelated commits in one) - -From 97bb4678dc03e753290b39bbff30ba2825df9517 Mon Sep 17 00:00:00 2001 -From: "Thomas E. Dickey" -Date: Sun, 7 Dec 2014 03:10:09 +0000 -Subject: [PATCH] ncurses 5.9 - patch 20141206 - -+ modify MKlib_gen.sh to work around change in development version of - gcc introduced here: - https://gcc.gnu.org/ml/gcc-patches/2014-06/msg02185.html - https://gcc.gnu.org/ml/gcc-patches/2014-07/msg00236.html - (reports by Marcus Shawcroft, Maohui Lei). - -diff --git a/ncurses/base/MKlib_gen.sh b/ncurses/base/MKlib_gen.sh -index d8cc3c9..b91398c 100755 ---- a/ncurses/base/MKlib_gen.sh -+++ b/ncurses/base/MKlib_gen.sh -@@ -474,11 +474,22 @@ sed -n -f $ED1 \ - -e 's/gen_$//' \ - -e 's/ / /g' >>$TMP - -+cat >$ED1 < $ED2 -+cat $ED2 >$TMP -+ - $preprocessor $TMP 2>/dev/null \ --| sed \ -- -e 's/ / /g' \ -- -e 's/^ //' \ -- -e 's/_Bool/NCURSES_BOOL/g' \ -+| sed -f $ED1 \ - | $AWK -f $AW2 \ - | sed -f $ED3 \ - | sed \ diff --git a/pkgs/development/libraries/opencollada/default.nix b/pkgs/development/libraries/opencollada/default.nix index 5ce30b039696..af01c23fe1a8 100644 --- a/pkgs/development/libraries/opencollada/default.nix +++ b/pkgs/development/libraries/opencollada/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { name = "opencollada-${version}"; - version = "1.6.59"; + version = "1.6.62"; src = fetchFromGitHub { owner = "KhronosGroup"; repo = "OpenCOLLADA"; rev = "v${version}"; - sha256 = "0gpjvzcfyilb96x5ywajxgkw42ipwp4my36z9cq686bd9vpp3q0g"; + sha256 = "0bqki6sdvxsp9drzj87ma6n7m98az9pr0vyxhgw8b8b9knk8c48r"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/libraries/opencsg/default.nix b/pkgs/development/libraries/opencsg/default.nix index c5f79b8613ec..9b5f2c7097ae 100644 --- a/pkgs/development/libraries/opencsg/default.nix +++ b/pkgs/development/libraries/opencsg/default.nix @@ -2,11 +2,11 @@ }: stdenv.mkDerivation rec { - version = "1.4.0"; + version = "1.4.2"; name = "opencsg-${version}"; src = fetchurl { url = "http://www.opencsg.org/OpenCSG-${version}.tar.gz"; - sha256 = "13c73jxadm27h7spdh3qj1v6rnn81v4xwqlv5a6k72pv9kjnpd7c"; + sha256 = "1ysazynm759gnw1rdhn9xw9nixnzrlzrc462340a6iif79fyqlnr"; }; buildInputs = [mesa freeglut glew libXmu libXext libX11]; diff --git a/pkgs/development/libraries/opencv/3.x.nix b/pkgs/development/libraries/opencv/3.x.nix index 356e1e336ac2..ff3ac3b03635 100644 --- a/pkgs/development/libraries/opencv/3.x.nix +++ b/pkgs/development/libraries/opencv/3.x.nix @@ -1,7 +1,7 @@ { lib, stdenv , fetchurl, fetchFromGitHub, fetchpatch , cmake, pkgconfig, unzip, zlib, pcre, hdf5 -, caffe, glog, boost, google-gflags, protobuf +, glog, boost, google-gflags, protobuf , config , enableJPEG ? true, libjpeg @@ -12,12 +12,12 @@ , enableJPEG2K ? true, jasper , enableEigen ? true, eigen , enableOpenblas ? true, openblas +, enableContrib ? true , enableCuda ? (config.cudaSupport or false), cudatoolkit , enableUnfree ? false , enableIpp ? false -, enableContrib ? false , enablePython ? false, pythonPackages , enableGtk2 ? false, gtk2 , enableGtk3 ? false, gtk3 @@ -188,7 +188,6 @@ stdenv.mkDerivation rec { buildInputs = [ zlib pcre hdf5 glog boost google-gflags protobuf ] - ++ lib.optional (!stdenv.isDarwin) caffe ++ lib.optional enablePython pythonPackages.python ++ lib.optional enableGtk2 gtk2 ++ lib.optional enableGtk3 gtk3 @@ -222,11 +221,16 @@ stdenv.mkDerivation rec { NIX_CFLAGS_COMPILE = lib.optional enableEXR "-I${ilmbase.dev}/include/OpenEXR"; + # Configure can't find the library without this. + OpenBLAS_HOME = lib.optionalString enableOpenblas openblas; + cmakeFlags = [ "-DWITH_OPENMP=ON" "-DBUILD_PROTOBUF=OFF" "-DPROTOBUF_UPDATE_FILES=ON" "-DOPENCV_ENABLE_NONFREE=${printEnabled enableUnfree}" + "-DBUILD_TESTS=OFF" + "-DBUILD_PERF_TESTS=OFF" (opencvFlag "IPP" enableIpp) (opencvFlag "TIFF" enableTIFF) (opencvFlag "JASPER" enableJPEG2K) @@ -238,15 +242,15 @@ stdenv.mkDerivation rec { (opencvFlag "CUBLAS" enableCuda) ] ++ lib.optionals enableCuda [ "-DCUDA_FAST_MATH=ON" - "-DCUDA_HOST_COMPILER=${cudatoolkit.cc}/bin/gcc" - ] - ++ lib.optionals stdenv.isDarwin [ - "-DWITH_OPENCL=OFF" - "-DWITH_LAPACK=OFF" + "-DCUDA_HOST_COMPILER=${cudatoolkit.cc}/bin/cc" + "-DCUDA_NVCC_FLAGS=--expt-relaxed-constexpr" + ] ++ lib.optionals stdenv.isDarwin [ + "-DWITH_OPENCL=OFF" + "-DWITH_LAPACK=OFF" - # On OS X the tiny-dnn-1.0.0a3 dependency of dnn_modern fails to build. - "-DBUILD_opencv_dnn_modern=OFF" - ]; + # On OS X the tiny-dnn-1.0.0a3 dependency of dnn_modern fails to build. + "-DBUILD_opencv_dnn_modern=OFF" + ]; enableParallelBuilding = true; diff --git a/pkgs/development/libraries/opensubdiv/default.nix b/pkgs/development/libraries/opensubdiv/default.nix index 91899ad8da43..a78a584a4a52 100644 --- a/pkgs/development/libraries/opensubdiv/default.nix +++ b/pkgs/development/libraries/opensubdiv/default.nix @@ -30,7 +30,10 @@ stdenv.mkDerivation rec { "-DNO_EXAMPLES=1" "-DGLEW_INCLUDE_DIR=${glew.dev}/include" "-DGLEW_LIBRARY=${glew.dev}/lib" - ] ++ lib.optional cudaSupport "-DOSD_CUDA_NVCC_FLAGS=--gpu-architecture=compute_30"; + ] ++ lib.optionals cudaSupport [ + "-DOSD_CUDA_NVCC_FLAGS=--gpu-architecture=compute_30" + "-DCUDA_HOST_COMPILER=${cudatoolkit.cc}/bin/cc" + ]; enableParallelBuilding = true; diff --git a/pkgs/development/libraries/osm-gps-map/default.nix b/pkgs/development/libraries/osm-gps-map/default.nix index 63c882076b9d..febba5d5703f 100644 --- a/pkgs/development/libraries/osm-gps-map/default.nix +++ b/pkgs/development/libraries/osm-gps-map/default.nix @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { buildInputs = [ cairo glib gobjectIntrospection ] ++ (with gnome3; [ - gnome_common gtk libsoup + gnome-common gtk libsoup ]); meta = with stdenv.lib; { diff --git a/pkgs/development/libraries/physics/herwig/default.nix b/pkgs/development/libraries/physics/herwig/default.nix index 407be5c5e4a4..f3ba8a4a6ff6 100644 --- a/pkgs/development/libraries/physics/herwig/default.nix +++ b/pkgs/development/libraries/physics/herwig/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "herwig-${version}"; - version = "7.1.1"; + version = "7.1.2"; src = fetchurl { url = "http://www.hepforge.org/archive/herwig/Herwig-${version}.tar.bz2"; - sha256 = "13xaykwr7x6mp2bi22wz6dyzx3dxhcv6aw9cg8p29bh9l890g63j"; + sha256 = "0wr2mmmf5rlvcc6xgdagafm6vb5g6ifvrjc7kd86gs9jip32p29i"; }; nativeBuildInputs = [ autoconf automake libtool ]; diff --git a/pkgs/development/libraries/physics/pythia/default.nix b/pkgs/development/libraries/physics/pythia/default.nix index 94074f6dcb45..eca2807ce153 100644 --- a/pkgs/development/libraries/physics/pythia/default.nix +++ b/pkgs/development/libraries/physics/pythia/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "pythia-${version}"; - version = "8.219"; + version = "8.226"; src = fetchurl { url = "http://home.thep.lu.se/~torbjorn/pythia8/pythia${builtins.replaceStrings ["."] [""] version}.tgz"; - sha256 = "13fhphddl0jir8jyjvj6a9qz14wiv02q9lby8mcdyv8gsw0ir8hy"; + sha256 = "1jfjkq78d1llrrm2k5pgsl92a5z8af9rx3n83rzv28lxrqdjix4g"; }; buildInputs = [ boost fastjet hepmc zlib rsync lhapdf ]; diff --git a/pkgs/development/libraries/physics/thepeg/default.nix b/pkgs/development/libraries/physics/thepeg/default.nix index 7989eb518c78..63db874d8480 100644 --- a/pkgs/development/libraries/physics/thepeg/default.nix +++ b/pkgs/development/libraries/physics/thepeg/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "thepeg-${version}"; - version = "2.1.1"; + version = "2.1.2"; src = fetchurl { url = "http://www.hepforge.org/archive/thepeg/ThePEG-${version}.tar.bz2"; - sha256 = "1082n4q036sah5r4asyl3hpcyc05cymg40dnk3jsdjgv2v0vvc71"; + sha256 = "0jbz70ax05w3lpjvz71fnfz35rcjp0jry1nyjpa662714xd6f3va"; }; buildInputs = [ boost fastjet gsl hepmc lhapdf rivet zlib ]; diff --git a/pkgs/development/libraries/pipewire/default.nix b/pkgs/development/libraries/pipewire/default.nix index 3bd94c977e84..304d5baa3aad 100644 --- a/pkgs/development/libraries/pipewire/default.nix +++ b/pkgs/development/libraries/pipewire/default.nix @@ -1,10 +1,14 @@ { stdenv, fetchFromGitHub, meson, ninja, pkgconfig, doxygen, graphviz, valgrind , glib, dbus, gst_all_1, v4l_utils, alsaLib, ffmpeg, libjack2, libudev, libva, xlibs -, sbc, SDL2 +, sbc, SDL2, makeFontsConf, freefont_ttf }: let - version = "0.1.8"; + version = "0.1.9"; + + fontsConf = makeFontsConf { + fontDirectories = [ freefont_ttf ]; + }; in stdenv.mkDerivation rec { name = "pipewire-${version}"; @@ -12,7 +16,7 @@ in stdenv.mkDerivation rec { owner = "PipeWire"; repo = "pipewire"; rev = version; - sha256 = "1nim8d1lsf6yxk97piwmsz686w84b09lk6cagbyjr9m3k2hwybqn"; + sha256 = "0r9mgwbggnnijhdz49fnv0qdka364xn1h8yml2jakyqpfrm3i2nm"; }; outputs = [ "out" "dev" "doc" ]; @@ -34,8 +38,9 @@ in stdenv.mkDerivation rec { "-Denable_gstreamer=true" ]; + FONTCONFIG_FILE = fontsConf; # Fontconfig error: Cannot load default config file + doCheck = true; - checkPhase = "meson test"; meta = with stdenv.lib; { description = "Server and user space API to deal with multimedia pipelines"; diff --git a/pkgs/development/libraries/poco/default.nix b/pkgs/development/libraries/poco/default.nix index 407559137370..ae232cd531f9 100644 --- a/pkgs/development/libraries/poco/default.nix +++ b/pkgs/development/libraries/poco/default.nix @@ -3,11 +3,11 @@ stdenv.mkDerivation rec { name = "poco-${version}"; - version = "1.7.8"; + version = "1.8.1"; src = fetchurl { url = "https://pocoproject.org/releases/${name}/${name}-all.tar.gz"; - sha256 = "17y6kvj4qdpb3p1im8n9qfylfh4bd2xsvbpn24jv97x7f146nhjf"; + sha256 = "1pg48kk0354vsc6j2wnrk893l5xcsr3bjmkgykd3harcnvfqs7l8"; }; nativeBuildInputs = [ cmake pkgconfig ]; diff --git a/pkgs/development/libraries/polkit/default.nix b/pkgs/development/libraries/polkit/default.nix index 6bf9bcb954c1..ef865529805f 100644 --- a/pkgs/development/libraries/polkit/default.nix +++ b/pkgs/development/libraries/polkit/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, fetchpatch, autoreconfHook, pkgconfig, glib, expat, pam , intltool, spidermonkey_17 , gobjectIntrospection, libxslt, docbook_xsl -, docbook_xml_dtd_412, gtk_doc +, docbook_xml_dtd_412, gtk-doc , useSystemd ? stdenv.isLinux, systemd }: @@ -50,7 +50,7 @@ stdenv.mkDerivation rec { outputs = [ "bin" "dev" "out" ]; # small man pages in $bin nativeBuildInputs = - [ gtk_doc pkgconfig autoreconfHook intltool gobjectIntrospection ] + [ gtk-doc pkgconfig autoreconfHook intltool gobjectIntrospection ] ++ [ libxslt docbook_xsl docbook_xml_dtd_412 ]; # man pages buildInputs = [ glib expat pam spidermonkey_17 gobjectIntrospection ] diff --git a/pkgs/development/libraries/postgis/2.3.nix b/pkgs/development/libraries/postgis/2.3.nix new file mode 100644 index 000000000000..8e6218a0d561 --- /dev/null +++ b/pkgs/development/libraries/postgis/2.3.nix @@ -0,0 +1,102 @@ +{ fetchurl +, stdenv +, perl +, libxml2 +, postgresql +, geos +, proj +, flex +, gdal +, json_c +, pkgconfig +, file +}: + + /* + + ### NixOS - usage: + ================== + + services.postgresql.extraPlugins = [ (pkgs.postgis.override { postgresql = pkgs.postgresql95; }) ]; + + + ### important Postgis implementation details: + ============================================= + + Postgis provides a shared library implementing many operations. They are + exposed to the Postgres SQL interpreter by special SQL queries eg: + + CREATE FUNCTION [...] + AS '[..]liblwgeom', 'lwhistogram2d_in' LANGUAGE 'C' IMMUTABLE STRICT; -- WITH (isstrict); + + where liblwgeom is the shared library. + Postgis < 1.5 used absolute paths, in NixOS $libdir is always used. + + Thus if you want to use postgresql dumps which were created by non NixOS + systems you have to adopt the library path. + + + ### TODO: + ========= + the bin commands to have gtk gui: + */ + + +let + version = "2.3.1"; + sha256 = "0xd21h2k6x3i1b3z6pgm3pmkfpxm6irxd5wbx68acjndjgd6p3ac"; +in stdenv.mkDerivation rec { + name = "postgis-${version}"; + + src = fetchurl { + url = "http://download.osgeo.org/postgis/source/postgis-${builtins.toString version}.tar.gz"; + inherit sha256; + }; + + # don't pass these vars to the builder + removeAttrs = ["sql_comments" "sql_srcs"]; + + # create aliases for all commands adding version information + postInstall = '' + sql_srcs=$(for sql in ${builtins.toString sql_srcs}; do echo -n "$(find $out -iname "$sql") "; done ) + + for prog in $out/bin/*; do # */ + ln -s $prog $prog-${version} + done + + cp -r doc $out + ''; + + buildInputs = [ libxml2 postgresql geos proj perl gdal json_c pkgconfig ]; + + sql_comments = "postgis_comments.sql"; + + sql_srcs = ["postgis.sql" "spatial_ref_sys.sql"]; + + # postgis config directory assumes /include /lib from the same root for json-c library + NIX_LDFLAGS = "-L${stdenv.lib.getLib json_c}/lib"; + + dontDisableStatic = true; + preConfigure = '' + sed -i 's@/usr/bin/file@${file}/bin/file@' configure + configureFlags="--datadir=$out/share --datarootdir=$out/share --bindir=$out/bin --with-gdalconfig=${gdal}/bin/gdal-config --with-jsondir=${json_c.dev}" + makeFlags="PERL=${perl}/bin/perl datadir=$out/share pkglibdir=$out/lib bindir=$out/bin" + ''; + postConfigure = '' + sed -i "s|@mkdir -p \$(DESTDIR)\$(PGSQL_BINDIR)||g ; + s|\$(DESTDIR)\$(PGSQL_BINDIR)|$prefix/bin|g + " \ + "raster/loader/Makefile"; + sed -i "s|\$(DESTDIR)\$(PGSQL_BINDIR)|$prefix/bin|g + " \ + "raster/scripts/python/Makefile"; + ''; + + meta = with stdenv.lib; { + description = "Geographic Objects for PostgreSQL"; + homepage = http://postgis.refractions.net; + license = licenses.gpl2; + maintainers = [ maintainers.marcweber ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/development/libraries/postgis/default.nix b/pkgs/development/libraries/postgis/default.nix index bdf537f4375e..582ebc05176b 100644 --- a/pkgs/development/libraries/postgis/default.nix +++ b/pkgs/development/libraries/postgis/default.nix @@ -1,11 +1,23 @@ -args@{fetchurl, composableDerivation, stdenv, perl, libxml2, postgresql, geos, proj, flex, gdal, json_c, pkgconfig, file, ...}: +{ fetchurl +, stdenv +, perl +, libxml2 +, postgresql +, geos +, proj +, flex +, gdal +, json_c +, pkgconfig +, file +}: /* ### NixOS - usage: ================== - services.postgresql.extraPlugins = [ (pkgs.postgis.override { postgresql = pkgs.postgresql95; }).v_2_3_1 ]; + services.postgresql.extraPlugins = [ (pkgs.postgis.override { postgresql = pkgs.postgresql95; }) ]; ### important Postgis implementation details: @@ -31,108 +43,60 @@ args@{fetchurl, composableDerivation, stdenv, perl, libxml2, postgresql, geos, p let - pgDerivationBase = composableDerivation.composableDerivation {} ( fix : + version = "2.4.0"; + sha256 = "02baa90f04da41e04b6c18eedfda53110c45ae943d4e65050f6d202f7de07d29"; +in stdenv.mkDerivation rec { + name = "postgis-${version}"; - let version = fix.fixed.version; in { + src = fetchurl { + url = "http://download.osgeo.org/postgis/source/postgis-${builtins.toString version}.tar.gz"; + inherit sha256; + }; - name = "postgis-${version}"; + # don't pass these vars to the builder + removeAttrs = ["sql_comments" "sql_srcs"]; - src = fetchurl { - url = "http://postgis.refractions.net/download/postgis-${fix.fixed.version}.tar.gz"; - inherit (fix.fixed) sha256; - }; + # create aliases for all commands adding version information + postInstall = '' + sql_srcs=$(for sql in ${builtins.toString sql_srcs}; do echo -n "$(find $out -iname "$sql") "; done ) - # don't pass these vars to the builder - removeAttrs = ["hash" "sql_comments" "sql_srcs"]; + for prog in $out/bin/*; do # */ + ln -s $prog $prog-${version} + done - preConfigure = '' - configureFlags="--datadir=$out/share --datarootdir=$out/share --bindir=$out/bin" - makeFlags="PERL=${perl}/bin/perl datadir=$out/share pkglibdir=$out/lib bindir=$out/bin" - ''; + cp -r doc $out + ''; - # create aliases for all commands adding version information - postInstall = '' + buildInputs = [ libxml2 postgresql geos proj perl gdal json_c pkgconfig ]; - sql_srcs=$(for sql in ${builtins.toString fix.fixed.sql_srcs}; do echo -n "$(find $out -iname "$sql") "; done ) + sql_comments = "postgis_comments.sql"; - for prog in $out/bin/*; do # */ - ln -s $prog $prog-${version} - done + sql_srcs = ["postgis.sql" "spatial_ref_sys.sql"]; - cp -r doc $out - ''; - - buildInputs = [libxml2 postgresql geos proj perl]; - - sql_comments = "postgis_comments.sql"; - - meta = { - description = "Geographic Objects for PostgreSQL"; - homepage = http://postgis.refractions.net; - license = stdenv.lib.licenses.gpl2; - maintainers = [stdenv.lib.maintainers.marcweber]; - platforms = stdenv.lib.platforms.linux; - }; - }); - - pgDerivationBaseNewer = pgDerivationBase.merge (fix: { - src = fetchurl { - url = "http://download.osgeo.org/postgis/source/postgis-${builtins.toString fix.fixed.version}.tar.gz"; - inherit (fix.fixed) sha256; - }; - }); - -in rec { - - v_2_3_1 = pgDerivationBaseNewer.merge ( fix : { - version = "2.3.1"; - sha256 = "0xd21h2k6x3i1b3z6pgm3pmkfpxm6irxd5wbx68acjndjgd6p3ac"; - sql_srcs = ["postgis.sql" "spatial_ref_sys.sql"]; - builtInputs = [gdal json_c pkgconfig]; - - # postgis config directory assumes /include /lib from the same root for json-c library - NIX_LDFLAGS = "-L${stdenv.lib.getLib json_c}/lib"; - - dontDisableStatic = true; - preConfigure = '' - sed -i 's@/usr/bin/file@${file}/bin/file@' configure - configureFlags="$configureFlags --with-gdalconfig=${gdal}/bin/gdal-config --with-jsondir=${json_c.dev}" - ''; - postConfigure = '' - sed -i "s|@mkdir -p \$(DESTDIR)\$(PGSQL_BINDIR)||g ; - s|\$(DESTDIR)\$(PGSQL_BINDIR)|$prefix/bin|g - " \ - "raster/loader/Makefile"; - sed -i "s|\$(DESTDIR)\$(PGSQL_BINDIR)|$prefix/bin|g - " \ - "raster/scripts/python/Makefile"; - ''; - }); - - v_2_4_0 = pgDerivationBaseNewer.merge ( fix : { - version = "2.4.0"; - sha256 = "02baa90f04da41e04b6c18eedfda53110c45ae943d4e65050f6d202f7de07d29"; - sql_srcs = ["postgis.sql" "spatial_ref_sys.sql"]; - builtInputs = [gdal json_c pkgconfig]; - - # postgis config directory assumes /include /lib from the same root for json-c library - NIX_LDFLAGS = "-L${stdenv.lib.getLib json_c}/lib"; - - dontDisableStatic = true; - preConfigure = '' - sed -i 's@/usr/bin/file@${file}/bin/file@' configure - configureFlags="$configureFlags --with-gdalconfig=${gdal}/bin/gdal-config --with-jsondir=${json_c.dev}" - ''; - postConfigure = '' - sed -i "s|@mkdir -p \$(DESTDIR)\$(PGSQL_BINDIR)||g ; - s|\$(DESTDIR)\$(PGSQL_BINDIR)|$prefix/bin|g - " \ - "raster/loader/Makefile"; - sed -i "s|\$(DESTDIR)\$(PGSQL_BINDIR)|$prefix/bin|g - " \ - "raster/scripts/python/Makefile"; - ''; - }); + # postgis config directory assumes /include /lib from the same root for json-c library + NIX_LDFLAGS = "-L${stdenv.lib.getLib json_c}/lib"; + dontDisableStatic = true; + preConfigure = '' + sed -i 's@/usr/bin/file@${file}/bin/file@' configure + configureFlags="--datadir=$out/share --datarootdir=$out/share --bindir=$out/bin --with-gdalconfig=${gdal}/bin/gdal-config --with-jsondir=${json_c.dev}" + makeFlags="PERL=${perl}/bin/perl datadir=$out/share pkglibdir=$out/lib bindir=$out/bin" + ''; + postConfigure = '' + sed -i "s|@mkdir -p \$(DESTDIR)\$(PGSQL_BINDIR)||g ; + s|\$(DESTDIR)\$(PGSQL_BINDIR)|$prefix/bin|g + " \ + "raster/loader/Makefile"; + sed -i "s|\$(DESTDIR)\$(PGSQL_BINDIR)|$prefix/bin|g + " \ + "raster/scripts/python/Makefile"; + ''; + meta = with stdenv.lib; { + description = "Geographic Objects for PostgreSQL"; + homepage = http://postgis.refractions.net; + license = licenses.gpl2; + maintainers = [ maintainers.marcweber ]; + platforms = platforms.linux; + }; } diff --git a/pkgs/development/libraries/qca-qt5/default.nix b/pkgs/development/libraries/qca-qt5/default.nix index 0ea58e6c434f..ee27d89f5635 100644 --- a/pkgs/development/libraries/qca-qt5/default.nix +++ b/pkgs/development/libraries/qca-qt5/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, cmake, openssl, pkgconfig, qtbase }: stdenv.mkDerivation rec { - name = "qca-qt5-2.1.1"; + name = "qca-qt5-2.1.3"; src = fetchurl { - url = "http://download.kde.org/stable/qca/2.1.1/src/qca-2.1.1.tar.xz"; - sha256 = "10z9icq28fww4qbzwra8d9z55ywbv74qk68nhiqfrydm21wkxplm"; + url = "http://download.kde.org/stable/qca/2.1.3/src/qca-2.1.3.tar.xz"; + sha256 = "0lz3n652z208daxypdcxiybl0a9fnn6ida0q7fh5f42269mdhgq0"; }; buildInputs = [ openssl qtbase ]; diff --git a/pkgs/development/libraries/qt-4.x/4.8/default.nix b/pkgs/development/libraries/qt-4.x/4.8/default.nix index 46f24a08b5e1..8b3fd8c66781 100644 --- a/pkgs/development/libraries/qt-4.x/4.8/default.nix +++ b/pkgs/development/libraries/qt-4.x/4.8/default.nix @@ -176,13 +176,14 @@ stdenv.mkDerivation rec { enableParallelBuilding = true; NIX_CFLAGS_COMPILE = - optionalString stdenv.isLinux "-std=gnu++98" # gnu++ in (Obj)C flags is no good on Darwin - + optionalString (stdenv.isFreeBSD || stdenv.isDarwin) - " -I${glib.dev}/include/glib-2.0 -I${glib.out}/lib/glib-2.0/include" - + optionalString stdenv.isDarwin " -I${libcxx}/include/c++/v1"; + # with gcc7 the warnings blow the log over Hydra's limit + [ "-Wno-expansion-to-defined" "-Wno-unused-local-typedefs" ] + ++ optional stdenv.isLinux "-std=gnu++98" # gnu++ in (Obj)C flags is no good on Darwin + ++ optionals (stdenv.isFreeBSD || stdenv.isDarwin) + [ "-I${glib.dev}/include/glib-2.0" "-I${glib.out}/lib/glib-2.0/include" ] + ++ optional stdenv.isDarwin "-I${libcxx}/include/c++/v1"; - NIX_LDFLAGS = optionalString (stdenv.isFreeBSD || stdenv.isDarwin) - "-lglib-2.0"; + NIX_LDFLAGS = optionalString (stdenv.isFreeBSD || stdenv.isDarwin) "-lglib-2.0"; preBuild = optionalString stdenv.isDarwin '' # resolve "extra qualification on member" error diff --git a/pkgs/development/libraries/qt-5/5.10/fetch.sh b/pkgs/development/libraries/qt-5/5.10/fetch.sh index 849e76d616df..4770644ae4e9 100644 --- a/pkgs/development/libraries/qt-5/5.10/fetch.sh +++ b/pkgs/development/libraries/qt-5/5.10/fetch.sh @@ -1,2 +1,2 @@ -WGET_ARGS=( http://download.qt.io/official_releases/qt/5.10/5.10.0/submodules/ \ +WGET_ARGS=( http://download.qt.io/official_releases/qt/5.10/5.10.1/submodules/ \ -A '*.tar.xz' ) diff --git a/pkgs/development/libraries/qt-5/5.10/qtbase.patch b/pkgs/development/libraries/qt-5/5.10/qtbase.patch index b79ce9fc3568..286dea2178b1 100644 --- a/pkgs/development/libraries/qt-5/5.10/qtbase.patch +++ b/pkgs/development/libraries/qt-5/5.10/qtbase.patch @@ -261,14 +261,13 @@ index 55c74aad66..0bbc8718eb 100644 set_target_properties(Qt5::${Plugin} PROPERTIES \"IMPORTED_LOCATION_${Configuration}\" ${imported_location} diff --git a/mkspecs/features/mac/default_post.prf b/mkspecs/features/mac/default_post.prf -index e645ba5803..a0e5c68b7e 100644 +index 50a1ec6764..d6368b769e 100644 --- a/mkspecs/features/mac/default_post.prf +++ b/mkspecs/features/mac/default_post.prf -@@ -24,166 +24,3 @@ qt { - } +@@ -25,188 +25,3 @@ qt { } } -- + -# Add the same default rpaths as Xcode does for new projects. -# This is especially important for iOS/tvOS/watchOS where no other option is possible. -!no_default_rpath { @@ -291,6 +290,29 @@ index e645ba5803..a0e5c68b7e 100644 -} - -macx-xcode { +- qmake_pkginfo_typeinfo.name = QMAKE_PKGINFO_TYPEINFO +- !isEmpty(QMAKE_PKGINFO_TYPEINFO): \ +- qmake_pkginfo_typeinfo.value = $$QMAKE_PKGINFO_TYPEINFO +- else: \ +- qmake_pkginfo_typeinfo.value = "????" +- QMAKE_MAC_XCODE_SETTINGS += qmake_pkginfo_typeinfo +- +- !isEmpty(VERSION) { +- l = $$split(VERSION, '.') 0 0 # make sure there are at least three +- VER_MAJ = $$member(l, 0, 0) +- VER_MIN = $$member(l, 1, 1) +- VER_PAT = $$member(l, 2, 2) +- unset(l) +- +- qmake_full_version.name = QMAKE_FULL_VERSION +- qmake_full_version.value = $${VER_MAJ}.$${VER_MIN}.$${VER_PAT} +- QMAKE_MAC_XCODE_SETTINGS += qmake_full_version +- +- qmake_short_version.name = QMAKE_SHORT_VERSION +- qmake_short_version.value = $${VER_MAJ}.$${VER_MIN} +- QMAKE_MAC_XCODE_SETTINGS += qmake_short_version +- } +- - !isEmpty(QMAKE_XCODE_DEBUG_INFORMATION_FORMAT) { - debug_information_format.name = DEBUG_INFORMATION_FORMAT - debug_information_format.value = $$QMAKE_XCODE_DEBUG_INFORMATION_FORMAT @@ -432,10 +454,10 @@ index e645ba5803..a0e5c68b7e 100644 - -QMAKE_XCODE_LIBRARY_SUFFIX = $$qtPlatformTargetSuffix() diff --git a/mkspecs/features/mac/default_pre.prf b/mkspecs/features/mac/default_pre.prf -index 44636f2288..3b01424e67 100644 +index f1a4ca77b2..3b01424e67 100644 --- a/mkspecs/features/mac/default_pre.prf +++ b/mkspecs/features/mac/default_pre.prf -@@ -1,56 +1,2 @@ +@@ -1,67 +1,2 @@ CONFIG = asset_catalogs rez $$CONFIG load(default_pre) - @@ -492,6 +514,17 @@ index 44636f2288..3b01424e67 100644 -# feature, which allows Xcode to choose the Qt libraries to link to -# at build time, depending on the current Xcode SDK and configuration. -QMAKE_XCODE_LIBRARY_SUFFIX_SETTING = QT_LIBRARY_SUFFIX +- +-xcode_copy_phase_strip_setting.name = COPY_PHASE_STRIP +-xcode_copy_phase_strip_setting.value = NO +-QMAKE_MAC_XCODE_SETTINGS += xcode_copy_phase_strip_setting +- +-xcode_product_bundle_identifier_setting.name = PRODUCT_BUNDLE_IDENTIFIER +-xcode_product_bundle_identifier_setting.value = $$QMAKE_TARGET_BUNDLE_PREFIX +-isEmpty(xcode_product_bundle_identifier_setting.value): \ +- xcode_product_bundle_identifier_setting.value = "com.yourcompany" +-xcode_product_bundle_identifier_setting.value = "$${xcode_product_bundle_identifier_setting.value}.${PRODUCT_NAME:rfc1034identifier}" +-QMAKE_MAC_XCODE_SETTINGS += xcode_product_bundle_identifier_setting diff --git a/mkspecs/features/mac/sdk.prf b/mkspecs/features/mac/sdk.prf index 3f6dc076ca..e69de29bb2 100644 --- a/mkspecs/features/mac/sdk.prf @@ -676,10 +709,10 @@ index 72dde61a40..f891a2baed 100644 INSTALLS += inst_qch_docs diff --git a/mkspecs/features/qt_example_installs.prf b/mkspecs/features/qt_example_installs.prf -index 668669e4cd..eb4840a0aa 100644 +index c9ce926b1a..f00868a031 100644 --- a/mkspecs/features/qt_example_installs.prf +++ b/mkspecs/features/qt_example_installs.prf -@@ -82,7 +82,7 @@ sourcefiles += \ +@@ -88,7 +88,7 @@ sourcefiles += \ $$SOURCES $$HEADERS $$FORMS $$RESOURCES $$TRANSLATIONS \ $$DBUS_ADAPTORS $$DBUS_INTERFACES addInstallFiles(sources.files, $$sourcefiles) @@ -765,7 +798,7 @@ index 90d84cc535..387481bfc6 100644 INSTALLS += privpritarget } diff --git a/mkspecs/features/qt_plugin.prf b/mkspecs/features/qt_plugin.prf -index 62e1b69fde..abd63123f9 100644 +index 14fc5f9a94..2a0f2cd27f 100644 --- a/mkspecs/features/qt_plugin.prf +++ b/mkspecs/features/qt_plugin.prf @@ -88,7 +88,7 @@ CONFIG(static, static|shared)|prefix_build { @@ -851,10 +884,10 @@ index 706304cf34..546420f6ad 100644 set(_qt5_corelib_extra_includes \"$${CMAKE_INSTALL_DATA_DIR}mkspecs/$${CMAKE_MKSPEC}\") !!ENDIF diff --git a/src/corelib/kernel/qcoreapplication.cpp b/src/corelib/kernel/qcoreapplication.cpp -index 609e52d9d2..f0f29ce61f 100644 +index 3814894630..3c6468277c 100644 --- a/src/corelib/kernel/qcoreapplication.cpp +++ b/src/corelib/kernel/qcoreapplication.cpp -@@ -2580,6 +2580,15 @@ QStringList QCoreApplication::libraryPaths() +@@ -2601,6 +2601,15 @@ QStringList QCoreApplication::libraryPaths() QStringList *app_libpaths = new QStringList; coreappdata()->app_libpaths.reset(app_libpaths); @@ -871,7 +904,7 @@ index 609e52d9d2..f0f29ce61f 100644 if (!libPathEnv.isEmpty()) { QStringList paths = QFile::decodeName(libPathEnv).split(QDir::listSeparator(), QString::SkipEmptyParts); diff --git a/src/corelib/tools/qtimezoneprivate_tz.cpp b/src/corelib/tools/qtimezoneprivate_tz.cpp -index bcc1285472..a77eb472a3 100644 +index 6a5df6272a..a6136ca4cd 100644 --- a/src/corelib/tools/qtimezoneprivate_tz.cpp +++ b/src/corelib/tools/qtimezoneprivate_tz.cpp @@ -70,7 +70,11 @@ typedef QHash QTzTimeZoneHash; @@ -969,10 +1002,10 @@ index 07869efd7d..fb4183bada 100644 set(imported_implib \"$${CMAKE_LIB_DIR}${IMPLIB_LOCATION}\") !!ENDIF diff --git a/src/network/kernel/qdnslookup_unix.cpp b/src/network/kernel/qdnslookup_unix.cpp -index 1da00813ce..0bf877afcb 100644 +index ce1ec6442a..4f75655abe 100644 --- a/src/network/kernel/qdnslookup_unix.cpp +++ b/src/network/kernel/qdnslookup_unix.cpp -@@ -92,7 +92,7 @@ static bool resolveLibraryInternal() +@@ -95,7 +95,7 @@ static bool resolveLibraryInternal() if (!lib.load()) #endif { @@ -1013,10 +1046,10 @@ index b5a0a5bbeb..6c20305f4d 100644 QString TableGenerator::findComposeFile() diff --git a/src/plugins/platforms/xcb/gl_integrations/xcb_glx/qglxintegration.cpp b/src/plugins/platforms/xcb/gl_integrations/xcb_glx/qglxintegration.cpp -index 3bc8590d36..2a78fde518 100644 +index a59dc15b0e..a13ee89b5a 100644 --- a/src/plugins/platforms/xcb/gl_integrations/xcb_glx/qglxintegration.cpp +++ b/src/plugins/platforms/xcb/gl_integrations/xcb_glx/qglxintegration.cpp -@@ -580,7 +580,14 @@ QFunctionPointer QGLXContext::getProcAddress(const char *procName) +@@ -584,7 +584,14 @@ QFunctionPointer QGLXContext::getProcAddress(const char *procName) #if QT_CONFIG(library) extern const QString qt_gl_library_name(); // QLibrary lib(qt_gl_library_name()); diff --git a/pkgs/development/libraries/qt-5/5.10/srcs.nix b/pkgs/development/libraries/qt-5/5.10/srcs.nix index 5369169aa67f..025c7aa44e13 100644 --- a/pkgs/development/libraries/qt-5/5.10/srcs.nix +++ b/pkgs/development/libraries/qt-5/5.10/srcs.nix @@ -3,323 +3,323 @@ { qt3d = { - version = "5.10.0"; + version = "5.10.1"; src = fetchurl { - url = "${mirror}/official_releases/qt/5.10/5.10.0/submodules/qt3d-everywhere-src-5.10.0.tar.xz"; - sha256 = "1arlplfpqdk0qki7bs1pp16y9cwa0awn071p551jg4y74xr7wi8j"; - name = "qt3d-everywhere-src-5.10.0.tar.xz"; + url = "${mirror}/official_releases/qt/5.10/5.10.1/submodules/qt3d-everywhere-src-5.10.1.tar.xz"; + sha256 = "0fvb346xhiyc0csxcvs5ifwkzs9wnza54vvsw6dvyax76qjv87q4"; + name = "qt3d-everywhere-src-5.10.1.tar.xz"; }; }; qtactiveqt = { - version = "5.10.0"; + version = "5.10.1"; src = fetchurl { - url = "${mirror}/official_releases/qt/5.10/5.10.0/submodules/qtactiveqt-everywhere-src-5.10.0.tar.xz"; - sha256 = "0x6nbi5hlbr1pncbd8zzkwmqi04gcy64q3bjy5w45rg6zws41mzr"; - name = "qtactiveqt-everywhere-src-5.10.0.tar.xz"; + url = "${mirror}/official_releases/qt/5.10/5.10.1/submodules/qtactiveqt-everywhere-src-5.10.1.tar.xz"; + sha256 = "1r4i72i1pl9xnmcx8rr8g48fmym8mxs28pkg1nl302xi6izan8ch"; + name = "qtactiveqt-everywhere-src-5.10.1.tar.xz"; }; }; qtandroidextras = { - version = "5.10.0"; + version = "5.10.1"; src = fetchurl { - url = "${mirror}/official_releases/qt/5.10/5.10.0/submodules/qtandroidextras-everywhere-src-5.10.0.tar.xz"; - sha256 = "1ifb49px86abaf4znmlis9wyyxq132nlgj3fyqppbx1sranikygk"; - name = "qtandroidextras-everywhere-src-5.10.0.tar.xz"; + url = "${mirror}/official_releases/qt/5.10/5.10.1/submodules/qtandroidextras-everywhere-src-5.10.1.tar.xz"; + sha256 = "03jmf7gw4abn5gj92b1ns0k75bbi4wycbc4bbb7c9mngzkv3nzkn"; + name = "qtandroidextras-everywhere-src-5.10.1.tar.xz"; }; }; qtbase = { - version = "5.10.0"; + version = "5.10.1"; src = fetchurl { - url = "${mirror}/official_releases/qt/5.10/5.10.0/submodules/qtbase-everywhere-src-5.10.0.tar.xz"; - sha256 = "0qpp56cbw1sfz5ayhj2mskb07cl6jd1ijayg29y624qa6b6phmgx"; - name = "qtbase-everywhere-src-5.10.0.tar.xz"; + url = "${mirror}/official_releases/qt/5.10/5.10.1/submodules/qtbase-everywhere-src-5.10.1.tar.xz"; + sha256 = "0sd9cn3ywkjfswddcxhbfplkwk8snqld752q5laaapdakhc0wrnq"; + name = "qtbase-everywhere-src-5.10.1.tar.xz"; }; }; qtcanvas3d = { - version = "5.10.0"; + version = "5.10.1"; src = fetchurl { - url = "${mirror}/official_releases/qt/5.10/5.10.0/submodules/qtcanvas3d-everywhere-src-5.10.0.tar.xz"; - sha256 = "11r98mdxy833kcnywlsjrfaqhax7m3b6yhb56072qvr30rpn52fj"; - name = "qtcanvas3d-everywhere-src-5.10.0.tar.xz"; + url = "${mirror}/official_releases/qt/5.10/5.10.1/submodules/qtcanvas3d-everywhere-src-5.10.1.tar.xz"; + sha256 = "1h5hpjwdyp824r2ajmaqjcshra06yfzz7dp991h4kf54da79m0ny"; + name = "qtcanvas3d-everywhere-src-5.10.1.tar.xz"; }; }; qtcharts = { - version = "5.10.0"; + version = "5.10.1"; src = fetchurl { - url = 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"0lwa0i6zspcrii0ak1dyxacif1fkv2vhmdp3dmp7af71bwg49spi"; + name = "qttools-everywhere-src-5.10.1.tar.xz"; }; }; qttranslations = { - version = "5.10.0"; + version = "5.10.1"; src = fetchurl { - url = "${mirror}/official_releases/qt/5.10/5.10.0/submodules/qttranslations-everywhere-src-5.10.0.tar.xz"; - sha256 = "1gmrisf08nsrni7fyjlz5ggfgfzzkjpq3g7l2hc6vq5g04vbskgc"; - name = "qttranslations-everywhere-src-5.10.0.tar.xz"; + url = "${mirror}/official_releases/qt/5.10/5.10.1/submodules/qttranslations-everywhere-src-5.10.1.tar.xz"; + sha256 = "1za34rvn3bhzi4mxqm9lghdhaqcxpsi6xa61dfbhpc047l788v8z"; + name = "qttranslations-everywhere-src-5.10.1.tar.xz"; }; }; qtvirtualkeyboard = { - version = "5.10.0"; + version = "5.10.1"; src = fetchurl { - url = "${mirror}/official_releases/qt/5.10/5.10.0/submodules/qtvirtualkeyboard-everywhere-src-5.10.0.tar.xz"; - sha256 = "0mqb9sgvq7djd2lz4q4p6p9f0c23cfhk447zx4axvv1mldjxsb9c"; - name = "qtvirtualkeyboard-everywhere-src-5.10.0.tar.xz"; + url = "${mirror}/official_releases/qt/5.10/5.10.1/submodules/qtvirtualkeyboard-everywhere-src-5.10.1.tar.xz"; + sha256 = "0bnmhy0kibvyra0i15qzwc9195s8wpfhg5gk0d6rfwd5d07gj6a3"; + name = "qtvirtualkeyboard-everywhere-src-5.10.1.tar.xz"; }; }; qtwayland = { - version = "5.10.0"; + version = "5.10.1"; src = fetchurl { - url = "${mirror}/official_releases/qt/5.10/5.10.0/submodules/qtwayland-everywhere-src-5.10.0.tar.xz"; - sha256 = "14sb0227rzqzf5z8dz8b9nzkk5rwq6hrfxifz603iy4mdijzjmsn"; - name = "qtwayland-everywhere-src-5.10.0.tar.xz"; + url = "${mirror}/official_releases/qt/5.10/5.10.1/submodules/qtwayland-everywhere-src-5.10.1.tar.xz"; + sha256 = "0mk3p8pkfia3z7v7phk0qdyzd1zkfpk92c995g851p5wbqx699zm"; + name = "qtwayland-everywhere-src-5.10.1.tar.xz"; }; }; qtwebchannel = { - version = "5.10.0"; + version = "5.10.1"; src = fetchurl { - url = "${mirror}/official_releases/qt/5.10/5.10.0/submodules/qtwebchannel-everywhere-src-5.10.0.tar.xz"; - sha256 = "18rml5xyb9chz8wrfamsgx4z32kkjbk1rc47ynvhn49mcbf2897j"; - name = "qtwebchannel-everywhere-src-5.10.0.tar.xz"; + url = "${mirror}/official_releases/qt/5.10/5.10.1/submodules/qtwebchannel-everywhere-src-5.10.1.tar.xz"; + sha256 = "0r1p1ar4xh7g7lzi564hgw1ng5xkim4mkpgq29ymjlmhxjgl8b62"; + name = "qtwebchannel-everywhere-src-5.10.1.tar.xz"; }; }; qtwebengine = { - version = "5.10.0"; + version = "5.10.1"; src = fetchurl { - url = "${mirror}/official_releases/qt/5.10/5.10.0/submodules/qtwebengine-everywhere-src-5.10.0.tar.xz"; - sha256 = "1yb7jpydxg0dwdrx0iv7i5dq4wb9ld1iff8zpjdj8yl4xy4mkgx8"; - name = "qtwebengine-everywhere-src-5.10.0.tar.xz"; + url = "${mirror}/official_releases/qt/5.10/5.10.1/submodules/qtwebengine-everywhere-src-5.10.1.tar.xz"; + sha256 = "1ph1pinxn0dp44zall9gihbgziira4zpynixacm4ldd85f6lyr0j"; + name = "qtwebengine-everywhere-src-5.10.1.tar.xz"; }; }; qtwebglplugin = { - version = "5.10.0"; + version = "5.10.1"; src = fetchurl { - url = "${mirror}/official_releases/qt/5.10/5.10.0/submodules/qtwebglplugin-everywhere-src-5.10.0.tar.xz"; - sha256 = "0hgwb5lll3275knnj3ms04y1n0i6gph9kac2246ixmcq8sc7a2k7"; - name = "qtwebglplugin-everywhere-src-5.10.0.tar.xz"; + url = "${mirror}/official_releases/qt/5.10/5.10.1/submodules/qtwebglplugin-everywhere-src-5.10.1.tar.xz"; + sha256 = "1hdzymwai5f6agkn4hz32aq5fjv2lqdac285fwrlk5gsff0j0yal"; + name = "qtwebglplugin-everywhere-src-5.10.1.tar.xz"; }; }; qtwebsockets = { - version = "5.10.0"; + version = "5.10.1"; src = fetchurl { - url = "${mirror}/official_releases/qt/5.10/5.10.0/submodules/qtwebsockets-everywhere-src-5.10.0.tar.xz"; - sha256 = "00wlyhw7h2axyhinksfm912jfa3n73szxdccz5dlir8742i0zaqp"; - name = "qtwebsockets-everywhere-src-5.10.0.tar.xz"; + url = "${mirror}/official_releases/qt/5.10/5.10.1/submodules/qtwebsockets-everywhere-src-5.10.1.tar.xz"; + sha256 = "1sjkml5kqigvyxrkv5b7x1cy69d69dzma40yfg72vr7zal4pkkvf"; + name = "qtwebsockets-everywhere-src-5.10.1.tar.xz"; }; }; qtwebview = { - version = "5.10.0"; + version = "5.10.1"; src = fetchurl { - url = "${mirror}/official_releases/qt/5.10/5.10.0/submodules/qtwebview-everywhere-src-5.10.0.tar.xz"; - sha256 = "1955fkc7a22d7a0y2n7kz7r1md56v2s5qvyb3h68szs60zjnk3xa"; - name = "qtwebview-everywhere-src-5.10.0.tar.xz"; + url = "${mirror}/official_releases/qt/5.10/5.10.1/submodules/qtwebview-everywhere-src-5.10.1.tar.xz"; + sha256 = "110mwc423cq1bwdz0vv78cjprzy03xawxnxhfcs4138gssfj0n0b"; + name = "qtwebview-everywhere-src-5.10.1.tar.xz"; }; }; qtwinextras = { - version = "5.10.0"; + version = "5.10.1"; src = fetchurl { - url = "${mirror}/official_releases/qt/5.10/5.10.0/submodules/qtwinextras-everywhere-src-5.10.0.tar.xz"; - sha256 = "1mx5qihmh3awqcr9k3z2chxz8273bi5ha90v7f4fqr2vk3g6w4yd"; - name = "qtwinextras-everywhere-src-5.10.0.tar.xz"; + url = "${mirror}/official_releases/qt/5.10/5.10.1/submodules/qtwinextras-everywhere-src-5.10.1.tar.xz"; + sha256 = "05w9n8kry1mg3i14i4m98gm5hf20mlwxbagbk9xk11xykbm1wh0j"; + name = "qtwinextras-everywhere-src-5.10.1.tar.xz"; }; }; qtx11extras = { - version = "5.10.0"; + version = "5.10.1"; src = fetchurl { - url = "${mirror}/official_releases/qt/5.10/5.10.0/submodules/qtx11extras-everywhere-src-5.10.0.tar.xz"; - sha256 = "11jp0a40jqwcdq7isyip4f4mq2d58c9fx1kvg9g71m92n52ffyfb"; - name = "qtx11extras-everywhere-src-5.10.0.tar.xz"; + url = "${mirror}/official_releases/qt/5.10/5.10.1/submodules/qtx11extras-everywhere-src-5.10.1.tar.xz"; + sha256 = "1d4pvisxbcyb7ljl1lh2zg72kw44h9kk14l0xmvajb8bslgkg2n3"; + name = "qtx11extras-everywhere-src-5.10.1.tar.xz"; }; }; qtxmlpatterns = { - version = "5.10.0"; + version = "5.10.1"; src = fetchurl { - url = "${mirror}/official_releases/qt/5.10/5.10.0/submodules/qtxmlpatterns-everywhere-src-5.10.0.tar.xz"; - sha256 = "1hq3sbimbhaiw570d2cd84jhki0n2jw2x2s7iq92m53y4akbr2mh"; - name = "qtxmlpatterns-everywhere-src-5.10.0.tar.xz"; + url = "${mirror}/official_releases/qt/5.10/5.10.1/submodules/qtxmlpatterns-everywhere-src-5.10.1.tar.xz"; + sha256 = "1zp9smsfdqyfiarxs7r8kfr7yq68cdn7biddwl36cybax6fgbpiw"; + name = "qtxmlpatterns-everywhere-src-5.10.1.tar.xz"; }; }; qtwebkit = { diff --git a/pkgs/development/libraries/qt-5/modules/qtwebkit.nix b/pkgs/development/libraries/qt-5/modules/qtwebkit.nix index 4dce9c4e22e5..6834b7ce87b6 100644 --- a/pkgs/development/libraries/qt-5/modules/qtwebkit.nix +++ b/pkgs/development/libraries/qt-5/modules/qtwebkit.nix @@ -31,7 +31,8 @@ qtModule { ''; NIX_CFLAGS_COMPILE = - optionals flashplayerFix + [ "-Wno-expansion-to-defined" ] # with gcc7 this warning blows the log over Hydra's limit + ++ optionals flashplayerFix [ ''-DNIXPKGS_LIBGTK2="${getLib gtk2}/lib/libgtk-x11-2.0"'' ''-DNIXPKGS_LIBGDK2="${getLib gdk_pixbuf}/lib/libgdk-x11-2.0"'' diff --git a/pkgs/development/libraries/resolv_wrapper/default.nix b/pkgs/development/libraries/resolv_wrapper/default.nix index 4ec06d68a329..fff1d6498361 100644 --- a/pkgs/development/libraries/resolv_wrapper/default.nix +++ b/pkgs/development/libraries/resolv_wrapper/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, cmake, pkgconfig }: stdenv.mkDerivation rec { - name = "resolv_wrapper-1.1.3"; + name = "resolv_wrapper-1.1.5"; src = fetchurl { url = "mirror://samba/cwrap/${name}.tar.gz"; - sha256 = "1h76155pnmd3pqxfyi00q0fg6v45ad9dhnjsqcsbzg18s626wyad"; + sha256 = "0v5hw5ipq2rrpraf4ck4r9w9xihmgwzkpf5wgppz7gc52fmgv2g9"; }; nativeBuildInputs = [ cmake pkgconfig ]; diff --git a/pkgs/development/libraries/rocksdb/default.nix b/pkgs/development/libraries/rocksdb/default.nix index b37a9bc04c39..562942f230fb 100644 --- a/pkgs/development/libraries/rocksdb/default.nix +++ b/pkgs/development/libraries/rocksdb/default.nix @@ -18,13 +18,13 @@ let in stdenv.mkDerivation rec { name = "rocksdb-${version}"; - version = "5.10.2"; + version = "5.10.3"; src = fetchFromGitHub { owner = "facebook"; repo = "rocksdb"; rev = "v${version}"; - sha256 = "00qnd56v4qyzxg0b3ya3flf2jhbbfaibj1y53bd5ciaw3af6zxnd"; + sha256 = "19d8i8map8qz639mhflmxc0w9gp78fvkq1l46y5s6b5imwh0w7xq"; }; nativeBuildInputs = [ which perl ]; diff --git a/pkgs/development/libraries/science/math/cudnn/default.nix b/pkgs/development/libraries/science/math/cudnn/default.nix index d6e55e7bf73c..f5715157531e 100644 --- a/pkgs/development/libraries/science/math/cudnn/default.nix +++ b/pkgs/development/libraries/science/math/cudnn/default.nix @@ -40,6 +40,6 @@ in version = "7.0.5"; cudatoolkit = cudatoolkit9; srcName = "cudnn-${cudatoolkit.majorVersion}-linux-x64-v7.tgz"; - sha256 = "1a3e076447d5b9860c73d9bebe7087ffcb7b0c8814fd1e506096435a2ad9ab0e"; + sha256 = "1rfmdd2v47p83fm3sfyvik31gci0q17qs6kjng6mvcsd6akmvb8y"; }; } diff --git a/pkgs/development/libraries/science/math/ipopt/default.nix b/pkgs/development/libraries/science/math/ipopt/default.nix index 567ee7853f88..f694f72f22b6 100644 --- a/pkgs/development/libraries/science/math/ipopt/default.nix +++ b/pkgs/development/libraries/science/math/ipopt/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "ipopt-${version}"; - version = "3.12.8"; + version = "3.12.9"; src = fetchurl { url = "http://www.coin-or.org/download/source/Ipopt/Ipopt-${version}.zip"; - sha256 = "1lyhgashyk2wswv0z2qnkxng32pim80kzf9jfgxi07wl09x753w1"; + sha256 = "1fqdjgxh6l1xjvw1ffma7lg92xqg0l8sj02y0zqvbfnx8i47qs9a"; }; CXXDEFS = [ "-DHAVE_RAND" "-DHAVE_CSTRING" "-DHAVE_CSTDIO" ]; diff --git a/pkgs/development/libraries/science/math/nccl/default.nix b/pkgs/development/libraries/science/math/nccl/default.nix index c4deccff5b7e..1d692f6316ff 100644 --- a/pkgs/development/libraries/science/math/nccl/default.nix +++ b/pkgs/development/libraries/science/math/nccl/default.nix @@ -1,41 +1,24 @@ -{ stdenv, fetchFromGitHub -, gcc5, eject, cudatoolkit -}: +{ callPackage, cudatoolkit8, cudatoolkit9 }: -stdenv.mkDerivation rec { - name = "cudatoolkit-${cudatoolkit.majorVersion}-nccl-${version}"; - version = "1.3.4-1"; - - src = fetchFromGitHub { - owner = "NVIDIA"; - repo = "nccl"; - rev = "v${version}"; - sha256 = "0fvnrfn572lc6i2a3xyhbifm53ivcrr46z6cqr3b0bwb1iq79m7q"; +let + generic = args: callPackage (import ./generic.nix (removeAttrs args ["cudatoolkit"])) { + inherit (args) cudatoolkit; }; - nativeBuildInputs = [ - gcc5 - eject - ]; +in - propagatedBuildInputs = [ - cudatoolkit - ]; +{ + nccl_cudatoolkit8 = generic rec { + version = "2.1.4"; + cudatoolkit = cudatoolkit8; + srcName = "nccl_${version}-1+cuda${cudatoolkit.majorVersion}_x86_64.txz"; + sha256 = "1lwwm8kdhna5m318yg304kl2gsz1jwhv4zv4gn8av2m57zh848zi"; + }; - makeFlags = [ - "PREFIX=$(out)" - "CUDA_HOME=${cudatoolkit}" - "CUDA_LIB=${cudatoolkit.lib}/lib" - ]; - - meta = with stdenv.lib; { - description = '' - NVIDIA Collective Communications Library. - Multi-GPU and multi-node collective communication primitives. - ''; - homepage = https://developer.nvidia.com/nccl; - license = licenses.bsd3; - platforms = [ "x86_64-linux" ]; - maintainers = with maintainers; [ hyphon81 ]; + nccl_cudatoolkit9 = generic rec { + version = "2.1.4"; + cudatoolkit = cudatoolkit9; + srcName = "nccl_${version}-1+cuda${cudatoolkit.majorVersion}_x86_64.txz"; + sha256 = "0pajmqzkacpszs63jh2hw2qqc49kj75kcf7r0ky8hdh560q8xn0p"; }; } diff --git a/pkgs/development/libraries/science/math/nccl/generic.nix b/pkgs/development/libraries/science/math/nccl/generic.nix new file mode 100644 index 000000000000..aa04d75b078b --- /dev/null +++ b/pkgs/development/libraries/science/math/nccl/generic.nix @@ -0,0 +1,57 @@ +{ version +, srcName +, sha256 +}: + +{ stdenv +, lib +, requireFile +, cudatoolkit +}: + +stdenv.mkDerivation rec { + name = "cudatoolkit-${cudatoolkit.majorVersion}-nccl-${version}"; + + inherit version; + + src = requireFile rec { + name = srcName; + inherit sha256; + message = '' + This nix expression requires that ${name} is already part of the store. + Register yourself to NVIDIA Accelerated Computing Developer Program, retrieve the NCCL library + at https://developer.nvidia.com/nccl, and run the following command in the download directory: + nix-prefetch-url file://${name} + ''; + }; + + unpackCmd = "tar xJf $src"; + + installPhase = '' + function fixRunPath { + p=$(patchelf --print-rpath $1) + patchelf --set-rpath "$p:${lib.makeLibraryPath [ stdenv.cc.cc ]}" $1 + } + fixRunPath lib/libnccl.so + + mkdir -p $out + cp -a include $out/include + cp -a lib $out/lib + ''; + + propagatedBuildInputs = [ + cudatoolkit + ]; + + passthru = { + inherit cudatoolkit; + }; + + meta = with stdenv.lib; { + description = "Multi-GPU and multi-node collective communication primitives that are performance optimized for NVIDIA GPUs"; + homepage = https://developer.nvidia.com/nccl; + license = licenses.unfree; + platforms = [ "x86_64-linux" ]; + maintainers = with maintainers; [ mdaiter ]; + }; +} diff --git a/pkgs/development/libraries/science/math/openspecfun/default.nix b/pkgs/development/libraries/science/math/openspecfun/default.nix index 989ad27055fa..3a4c5a784385 100644 --- a/pkgs/development/libraries/science/math/openspecfun/default.nix +++ b/pkgs/development/libraries/science/math/openspecfun/default.nix @@ -1,10 +1,10 @@ { stdenv, fetchurl, gfortran }: stdenv.mkDerivation { - name = "openspecfun-0.4"; + name = "openspecfun-0.5.3"; src = fetchurl { - url = "https://github.com/JuliaLang/openspecfun/archive/v0.4.tar.gz"; - sha256 = "0nsa3jjmlhcqkw5ba5ypbn3n0c8b6lc22zzlxnmxkxi9shhdx65z"; + url = "https://github.com/JuliaLang/openspecfun/archive/v0.5.3.tar.gz"; + sha256 = "1rs1bv8jq751fv9vq79890wqf9xlbjc7lvz3ighzyfczbyjcf18m"; }; makeFlags = [ "prefix=$(out)" ]; diff --git a/pkgs/development/libraries/shapelib/default.nix b/pkgs/development/libraries/shapelib/default.nix index b481bd0cf651..3234d1bb89bf 100644 --- a/pkgs/development/libraries/shapelib/default.nix +++ b/pkgs/development/libraries/shapelib/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, proj }: stdenv.mkDerivation rec { - name = "shapelib-1.4.0"; + name = "shapelib-1.4.1"; src = fetchurl { url = "http://download.osgeo.org/shapelib/${name}.tar.gz"; - sha256 = "18d7j5pn5srika7q3f90j0l2l4526xsjd64pin6z2b0gd7rdbp9y"; + sha256 = "1cr3b5jfglwisbyzj7fnxp9xysqad0fcmcqvqaja6qap6qblijd4"; }; buildInputs = [ proj ]; diff --git a/pkgs/development/libraries/socket_wrapper/default.nix b/pkgs/development/libraries/socket_wrapper/default.nix index 4db4a07b4e56..6d0ca4c1d675 100644 --- a/pkgs/development/libraries/socket_wrapper/default.nix +++ b/pkgs/development/libraries/socket_wrapper/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, cmake, pkgconfig }: stdenv.mkDerivation rec { - name = "socket_wrapper-1.1.5"; + name = "socket_wrapper-1.1.9"; src = fetchurl { url = "mirror://samba/cwrap/${name}.tar.gz"; - sha256 = "01gn21kbicwfn3vlnnir8c11z2g54b532bj3qrpdrhgrcm3ifi45"; + sha256 = "1d7bbr4j1ybq2dm6q3f6ncv36qqxyjygq4z1q0hvadlcaw7pj79c"; }; nativeBuildInputs = [ cmake pkgconfig ]; diff --git a/pkgs/development/libraries/soundtouch/default.nix b/pkgs/development/libraries/soundtouch/default.nix index 729967ea1b7f..c338d6762a4d 100644 --- a/pkgs/development/libraries/soundtouch/default.nix +++ b/pkgs/development/libraries/soundtouch/default.nix @@ -2,10 +2,10 @@ stdenv.mkDerivation rec { pName = "soundtouch"; - name = "${pName}-1.9.2"; + name = "${pName}-2.0.0"; src = fetchurl { url = "http://www.surina.net/soundtouch/${name}.tar.gz"; - sha256 = "04y5l56yn4jvwpv9mn1p3m2vi5kdym9xpdac8pmhwhl13r8qdsya"; + sha256 = "09cxr02mfyj2bg731bj0i9hh565x8l9p91aclxs8wpqv8b8zf96j"; }; buildInputs = [ autoconf automake libtool ]; diff --git a/pkgs/development/libraries/spice-gtk/default.nix b/pkgs/development/libraries/spice-gtk/default.nix index 080dbc4510dd..01b766351c27 100644 --- a/pkgs/development/libraries/spice-gtk/default.nix +++ b/pkgs/development/libraries/spice-gtk/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, spice_protocol, gettext, celt_0_5_1 +{ stdenv, fetchurl, pkgconfig, spice-protocol, gettext, celt_0_5_1 , openssl, libpulseaudio, pixman, gobjectIntrospection, libjpeg_turbo, zlib , cyrus_sasl, python2Packages, autoreconfHook, usbredir, libsoup , gtk3, epoxy }: @@ -16,7 +16,7 @@ in stdenv.mkDerivation rec { }; buildInputs = [ - spice_protocol celt_0_5_1 openssl libpulseaudio pixman gobjectIntrospection + spice-protocol celt_0_5_1 openssl libpulseaudio pixman gobjectIntrospection libjpeg_turbo zlib cyrus_sasl python pygtk usbredir gtk3 epoxy ]; diff --git a/pkgs/development/libraries/spice/default.nix b/pkgs/development/libraries/spice/default.nix index c8e98d3d28ed..1ab76340cc7c 100644 --- a/pkgs/development/libraries/spice/default.nix +++ b/pkgs/development/libraries/spice/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, fetchpatch, pkgconfig, pixman, celt, alsaLib , openssl, libXrandr, libXfixes, libXext, libXrender, libXinerama -, libjpeg, zlib, spice_protocol, python, pyparsing, glib, cyrus_sasl +, libjpeg, zlib, spice-protocol, python, pyparsing, glib, cyrus_sasl , lz4 }: with stdenv.lib; @@ -36,7 +36,7 @@ stdenv.mkDerivation rec { libXrandr libXfixes libXrender libXext libXinerama python pyparsing glib cyrus_sasl lz4 ]; - nativeBuildInputs = [ pkgconfig spice_protocol ]; + nativeBuildInputs = [ pkgconfig spice-protocol ]; NIX_CFLAGS_COMPILE = "-fno-stack-protector"; diff --git a/pkgs/development/libraries/sqlcipher/default.nix b/pkgs/development/libraries/sqlcipher/default.nix index c1f624f8744d..ed19814be34a 100644 --- a/pkgs/development/libraries/sqlcipher/default.nix +++ b/pkgs/development/libraries/sqlcipher/default.nix @@ -4,13 +4,13 @@ assert readline != null -> ncurses != null; stdenv.mkDerivation rec { name = "sqlcipher-${version}"; - version = "3.4.0"; + version = "3.4.2"; src = fetchFromGitHub { owner = "sqlcipher"; repo = "sqlcipher"; rev = "v${version}"; - sha256 = "1lwc2m21sax3pnjfqddldbpbwr3b51s91fxz7dd7hf6ly8swnsvp"; + sha256 = "168wb6fvyap7y8j86fb3xl5rd4wmhiq0dxvx9wxwi5kwm1j4vn1a"; }; buildInputs = [ readline ncurses openssl tcl ]; diff --git a/pkgs/development/libraries/tclap/default.nix b/pkgs/development/libraries/tclap/default.nix index 276b279fc09e..a92c7b74ebf7 100644 --- a/pkgs/development/libraries/tclap/default.nix +++ b/pkgs/development/libraries/tclap/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl }: stdenv.mkDerivation rec { - name = "tclap-1.2.1"; + name = "tclap-1.2.2"; src = fetchurl { url = "mirror://sourceforge/tclap/${name}.tar.gz"; - sha256 = "1fzf7l1wvlhxnpwi15jvvfizn836s7r0r8vckgbqk2lyf7ihz7wz"; + sha256 = "0dsqvsgzam3mypj2ladn6v1yjq9zd47p3lg21jx6kz5azkkkn0gm"; }; meta = { diff --git a/pkgs/development/libraries/tcllib/default.nix b/pkgs/development/libraries/tcllib/default.nix index 75b811df30c3..6ffbe5dc60c5 100644 --- a/pkgs/development/libraries/tcllib/default.nix +++ b/pkgs/development/libraries/tcllib/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "tcllib-${version}"; - version = "1.18"; + version = "1.19"; src = fetchurl { url = "mirror://sourceforge/tcllib/tcllib-${version}.tar.gz"; - sha256 = "05dmrk9qsryah2n17z6z85dj9l9lfyvnsd7faw0p9bs1pp5pwrkj"; + sha256 = "173abxaazdmf210v651708ab6h7xhskvd52krxk6ifam337qgzh1"; }; passthru = { diff --git a/pkgs/development/libraries/tdb/default.nix b/pkgs/development/libraries/tdb/default.nix index 7ccd98856f62..d372c61dbe28 100644 --- a/pkgs/development/libraries/tdb/default.nix +++ b/pkgs/development/libraries/tdb/default.nix @@ -3,11 +3,11 @@ }: stdenv.mkDerivation rec { - name = "tdb-1.3.11"; + name = "tdb-1.3.15"; src = fetchurl { url = "mirror://samba/tdb/${name}.tar.gz"; - sha256 = "0i1l38h0vyck6zkcj4fn2l03spadlmyr1qa1xpdp9dy2ccbm3s1r"; + sha256 = "0a37jhpij8wr4f4pjqdlwnffy2l6a2vkqdpz1bqxj6v06cwbz8dl"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/libraries/telepathy/farstream/default.nix b/pkgs/development/libraries/telepathy/farstream/default.nix index aed08435a149..41308a7ef4ec 100644 --- a/pkgs/development/libraries/telepathy/farstream/default.nix +++ b/pkgs/development/libraries/telepathy/farstream/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, telepathy_glib, farstream, dbus_glib }: +{ stdenv, fetchurl, pkgconfig, telepathy-glib, farstream, dbus-glib }: stdenv.mkDerivation rec { name = "${pname}-0.6.2"; @@ -9,7 +9,7 @@ stdenv.mkDerivation rec { sha256 = "02ky12bb92prr5f6xmvmfq4yz2lj33li6nj4829a98hk5pr9k83g"; }; - propagatedBuildInputs = [ dbus_glib telepathy_glib farstream ]; + propagatedBuildInputs = [ dbus-glib telepathy-glib farstream ]; nativeBuildInputs = [ pkgconfig ]; meta = { diff --git a/pkgs/development/libraries/telepathy/glib/default.nix b/pkgs/development/libraries/telepathy/glib/default.nix index fffe677f6a71..df5c76abd7cd 100644 --- a/pkgs/development/libraries/telepathy/glib/default.nix +++ b/pkgs/development/libraries/telepathy/glib/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, dbus_glib, glib, python2, pkgconfig, libxslt +{ stdenv, fetchurl, dbus-glib, glib, python2, pkgconfig, libxslt , gobjectIntrospection, valaSupport ? true, vala_0_38, glibcLocales }: stdenv.mkDerivation rec { @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { configureFlags = stdenv.lib.optional valaSupport "--enable-vala-bindings"; LC_ALL = "en_US.UTF-8"; - propagatedBuildInputs = [dbus_glib glib gobjectIntrospection]; + propagatedBuildInputs = [dbus-glib glib gobjectIntrospection]; nativeBuildInputs = [ pkgconfig libxslt ] ++ stdenv.lib.optional valaSupport vala_0_38; buildInputs = [ glibcLocales python2 ]; diff --git a/pkgs/development/libraries/telepathy/qt/default.nix b/pkgs/development/libraries/telepathy/qt/default.nix index 18888df5c52b..90dd47c11e2f 100644 --- a/pkgs/development/libraries/telepathy/qt/default.nix +++ b/pkgs/development/libraries/telepathy/qt/default.nix @@ -1,5 +1,5 @@ -{ stdenv, fetchurl, cmake, qtbase, pkgconfig, python2Packages, dbus_glib, dbus_daemon -, telepathy_farstream, telepathy_glib, fetchpatch }: +{ stdenv, fetchurl, cmake, qtbase, pkgconfig, python2Packages, dbus-glib, dbus_daemon +, telepathy-farstream, telepathy-glib, fetchpatch }: let inherit (python2Packages) python dbus-python; @@ -12,8 +12,8 @@ in stdenv.mkDerivation rec { }; nativeBuildInputs = [ cmake pkgconfig python ]; - propagatedBuildInputs = [ qtbase telepathy_farstream telepathy_glib ]; - buildInputs = [ dbus_glib ]; + propagatedBuildInputs = [ qtbase telepathy-farstream telepathy-glib ]; + buildInputs = [ dbus-glib ]; checkInputs = [ dbus_daemon dbus-python ]; patches = [ diff --git a/pkgs/development/libraries/tevent/default.nix b/pkgs/development/libraries/tevent/default.nix index 2982d33e9962..c5c064142db0 100644 --- a/pkgs/development/libraries/tevent/default.nix +++ b/pkgs/development/libraries/tevent/default.nix @@ -3,11 +3,11 @@ }: stdenv.mkDerivation rec { - name = "tevent-0.9.30"; + name = "tevent-0.9.35"; src = fetchurl { url = "mirror://samba/tevent/${name}.tar.gz"; - sha256 = "1gccqiibf6ia129xhqrg18anax3sxwfbwm8h4pvsga3ndxg931ap"; + sha256 = "1s8nbkmqz8dzdlsd6qynhvyl05pw93r151f3i2kgjfpbck9ak8r5"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/libraries/thrift/default.nix b/pkgs/development/libraries/thrift/default.nix index 55855d05d16e..45e5174ed573 100644 --- a/pkgs/development/libraries/thrift/default.nix +++ b/pkgs/development/libraries/thrift/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { name = "thrift-${version}"; - version = "0.10.0"; + version = "0.11.0"; src = fetchurl { url = "http://archive.apache.org/dist/thrift/${version}/${name}.tar.gz"; - sha256 = "02x1xw0l669idkn6xww39j60kqxzcbmim4mvpb5h9nz8wqnx1292"; + sha256 = "1hk0zb9289gf920rdl0clmwqx6kvygz92nj01lqrhd2arfv3ibf4"; }; #enableParallelBuilding = true; problems on hydra diff --git a/pkgs/development/libraries/uhttpmock/default.nix b/pkgs/development/libraries/uhttpmock/default.nix index 26c040721bdf..377ceba59e70 100644 --- a/pkgs/development/libraries/uhttpmock/default.nix +++ b/pkgs/development/libraries/uhttpmock/default.nix @@ -1,4 +1,4 @@ -{ stdenv, lib, fetchFromGitLab, autoconf, gtk_doc, automake, libtool, pkgconfig, glib, libsoup, gobjectIntrospection }: +{ stdenv, lib, fetchFromGitLab, autoconf, gtk-doc, automake, libtool, pkgconfig, glib, libsoup, gobjectIntrospection }: stdenv.mkDerivation rec { version="0.5.0"; @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ autoconf gtk_doc automake libtool glib libsoup gobjectIntrospection ]; + buildInputs = [ autoconf gtk-doc automake libtool glib libsoup gobjectIntrospection ]; preConfigure = "./autogen.sh"; diff --git a/pkgs/development/libraries/uid_wrapper/default.nix b/pkgs/development/libraries/uid_wrapper/default.nix index 9a2f6eb203a1..ccd876dfefbd 100644 --- a/pkgs/development/libraries/uid_wrapper/default.nix +++ b/pkgs/development/libraries/uid_wrapper/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, cmake, pkgconfig }: stdenv.mkDerivation rec { - name = "uid_wrapper-1.2.0"; + name = "uid_wrapper-1.2.4"; src = fetchurl { url = "mirror://samba/cwrap/${name}.tar.gz"; - sha256 = "0sfznk53kmz9m3rxwbv4pwwqs4bw3kr917y4n53h5jaxjym0m4c0"; + sha256 = "1yjhrm3rcyiykkrgpifmig117mzjxrms75kp8gpp8022f59zcq1w"; }; nativeBuildInputs = [ cmake pkgconfig ]; diff --git a/pkgs/development/libraries/umockdev/default.nix b/pkgs/development/libraries/umockdev/default.nix index fdf882ce817e..a0936310c42f 100644 --- a/pkgs/development/libraries/umockdev/default.nix +++ b/pkgs/development/libraries/umockdev/default.nix @@ -1,25 +1,21 @@ -{ stdenv, fetchFromGitHub, autoreconfHook -, pkgconfig, glib, systemd, libgudev, vala }: +{ stdenv, fetchFromGitHub, automake, autoconf, libtool, gtk-doc +, pkgconfig, glib, systemd, libgudev, vala }: stdenv.mkDerivation rec { - name = "umockdev"; - version = "0.8.13"; + name = "umockdev-${version}"; + version = "0.11"; src = fetchFromGitHub { owner = "martinpitt"; repo = "umockdev"; rev = version; - sha256 ="0bw2dpshlgbdwg5mhq4j22z474llpqix8pxii63r2bk5nhjc537k"; + sha256 ="1gpk2f03nad4qv084hx7549d68cqc1xibxm0ncanafm5xjz1hp55"; }; - buildInputs = [ glib systemd libgudev vala ]; - nativeBuildInputs = [ autoreconfHook pkgconfig ]; + buildInputs = [ glib systemd libgudev ]; + nativeBuildInputs = [ automake autoconf libtool gtk-doc pkgconfig vala ]; - ### docs/gtk-doc.make not found - prePatch = '' - sed -i 's|include $(top_srcdir)/docs/gtk-doc.make||g' docs/reference/Makefile.am - sed -i 's|+=|=|g' docs/reference/Makefile.am - ''; + preConfigure = "NOCONFIGURE=1 ./autogen.sh"; meta = with stdenv.lib; { description = "Mock hardware devices for creating unit tests"; diff --git a/pkgs/development/libraries/unittest-cpp/default.nix b/pkgs/development/libraries/unittest-cpp/default.nix index 97cffbf0f75b..90a28df6a15a 100644 --- a/pkgs/development/libraries/unittest-cpp/default.nix +++ b/pkgs/development/libraries/unittest-cpp/default.nix @@ -4,13 +4,13 @@ with stdenv.lib; stdenv.mkDerivation rec { name = "unittest-cpp-${version}"; - version = "1.6.1"; + version = "2.0.0"; src = fetchFromGitHub { owner = "unittest-cpp"; repo = "unittest-cpp"; rev = "v${version}"; - sha256 = "1sva2bm90z4vmwwvp0af82f7p4sdq5j2jjqzhs2ppihdkggn62d1"; + sha256 = "0sxb3835nly1jxn071f59fwbdzmqi74j040r81fanxyw3s1azw0i"; }; buildInputs = [cmake]; diff --git a/pkgs/development/libraries/unixODBC/default.nix b/pkgs/development/libraries/unixODBC/default.nix index 99ab8a056162..7d59866d0431 100644 --- a/pkgs/development/libraries/unixODBC/default.nix +++ b/pkgs/development/libraries/unixODBC/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "unixODBC-${version}"; - version = "2.3.4"; + version = "2.3.5"; src = fetchurl { url = "ftp://ftp.unixodbc.org/pub/unixODBC/${name}.tar.gz"; - sha256 = "0f8y88rcc2akjvjv5y66yx7k0ms9h1s0vbcfy25j93didflhj59f"; + sha256 = "0ns93daph4wmk92d7m2w48x0yki4m1yznxnn97p1ldn6bkh742bn"; }; configureFlags = [ "--disable-gui" "--sysconfdir=/etc" ]; diff --git a/pkgs/development/libraries/usbredir/default.nix b/pkgs/development/libraries/usbredir/default.nix index 4735375de1f9..507c494ea27d 100644 --- a/pkgs/development/libraries/usbredir/default.nix +++ b/pkgs/development/libraries/usbredir/default.nix @@ -10,7 +10,8 @@ stdenv.mkDerivation rec { }; # Works around bunch of "format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'uint64_t {aka long long unsigned int}'" warnings - NIX_CFLAGS_COMPILE = stdenv.lib.optionalString (!stdenv.is64bit) "-Wno-error=format"; + NIX_CFLAGS_COMPILE = stdenv.lib.optional (!stdenv.is64bit) "-Wno-error=format" + ++ [ "-Wno-error=format-truncation" ]; # newly detected with gcc-7 nativeBuildInputs = [ pkgconfig ]; buildInputs = [ libusb ]; diff --git a/pkgs/development/libraries/vc/default.nix b/pkgs/development/libraries/vc/default.nix index 1dbbcf798c9f..e2a2af615b88 100644 --- a/pkgs/development/libraries/vc/default.nix +++ b/pkgs/development/libraries/vc/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "Vc-${version}"; - version = "1.3.2"; + version = "1.3.3"; src = fetchFromGitHub { owner = "VcDevel"; repo = "Vc"; rev = version; - sha256 = "119sm0kldr5j163ff04fra35420cvpj040hs7n0mnfbcgyx4nxq9"; + sha256 = "0y4riz2kiw6a9w2zydj6x0vhy2qc9v17wspq3n2q88nbas72yd2m"; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/development/libraries/vcdimager/default.nix b/pkgs/development/libraries/vcdimager/default.nix index e93f071aefac..48ad33424f60 100644 --- a/pkgs/development/libraries/vcdimager/default.nix +++ b/pkgs/development/libraries/vcdimager/default.nix @@ -1,11 +1,11 @@ -{ stdenv, fetchurl, pkgconfig, libcdio, libxml2, popt }: +{ stdenv, lib, fetchurl, pkgconfig, libcdio, libxml2, popt }: -stdenv.mkDerivation { - name = "vcdimager-0.7.24"; +stdenv.mkDerivation rec { + name = "vcdimager-2.0.1"; src = fetchurl { - url = mirror://gnu/vcdimager/vcdimager-0.7.24.tar.gz; - sha256 = "1526jxynslg07i50v3c3afhc8swbd4si8y6s8m3h1wrz6mkplp87"; + url = "mirror://gnu/vcdimager/${name}.tar.gz"; + sha256 = "0ypnb1vp49nmzp5571ynlz6n1gh90f23w3z4x95hb7c2p7pmylb7"; }; nativeBuildInputs = [ pkgconfig ]; @@ -14,9 +14,10 @@ stdenv.mkDerivation { propagatedBuildInputs = [ libcdio ]; - meta = { + meta = with lib; { homepage = http://www.gnu.org/software/vcdimager/; description = "Full-featured mastering suite for authoring, disassembling and analyzing Video CDs and Super Video CDs"; - platforms = stdenv.lib.platforms.gnu; # random choice + platforms = platforms.gnu; # random choice + license = licenses.gpl2; }; } diff --git a/pkgs/development/libraries/webkitgtk/2.18.nix b/pkgs/development/libraries/webkitgtk/2.18.nix index d3e3163a8afe..a79ef3439166 100644 --- a/pkgs/development/libraries/webkitgtk/2.18.nix +++ b/pkgs/development/libraries/webkitgtk/2.18.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, perl, python2, ruby, bison, gperf, cmake , pkgconfig, gettext, gobjectIntrospection, libnotify, gnutls -, gtk3, wayland, libwebp, enchant, xlibs, libxkbcommon, epoxy, at_spi2_core -, libxml2, libsoup, libsecret, libxslt, harfbuzz, libpthreadstubs, pcre, nettle, libtasn1, p11_kit +, gtk3, wayland, libwebp, enchant, xlibs, libxkbcommon, epoxy, at-spi2-core +, libxml2, libsoup, libsecret, libxslt, harfbuzz, libpthreadstubs, pcre, nettle, libtasn1, p11-kit , libidn, libedit, readline, mesa, libintlOrEmpty , enableGeoLocation ? true, geoclue2, sqlite , enableGtk2Plugins ? false, gtk2 ? null @@ -88,8 +88,8 @@ stdenv.mkDerivation rec { buildInputs = libintlOrEmpty ++ [ libwebp enchant libnotify gnutls pcre nettle libidn - libxml2 libsecret libxslt harfbuzz libpthreadstubs libtasn1 p11_kit - sqlite gst-plugins-base gst-plugins-bad libxkbcommon epoxy at_spi2_core + libxml2 libsecret libxslt harfbuzz libpthreadstubs libtasn1 p11-kit + sqlite gst-plugins-base gst-plugins-bad libxkbcommon epoxy at-spi2-core ] ++ optional enableGeoLocation geoclue2 ++ optional enableGtk2Plugins gtk2 ++ (with xlibs; [ libXdmcp libXt libXtst ]) diff --git a/pkgs/development/libraries/wolfssl/default.nix b/pkgs/development/libraries/wolfssl/default.nix index fdbef27705e8..fa65a14121fc 100644 --- a/pkgs/development/libraries/wolfssl/default.nix +++ b/pkgs/development/libraries/wolfssl/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "wolfssl-${version}"; - version = "3.12.0"; + version = "3.13.0"; src = fetchFromGitHub { owner = "wolfSSL"; repo = "wolfssl"; rev = "v${version}-stable"; - sha256 = "0bjfzpgj50cd27lfz6vry9bdz0f0kvgq8plqdbhlk7kjp32nm2bv"; + sha256 = "0mvq7ifcpckfrg0zzcxqfbrv08pnz4a8g2z2j3s9h3cwns9ipn6h"; }; outputs = [ "out" "dev" "doc" "lib" ]; diff --git a/pkgs/development/libraries/zeitgeist/dbus_glib.patch b/pkgs/development/libraries/zeitgeist/dbus_glib.patch deleted file mode 100644 index 872ea0db31b8..000000000000 --- a/pkgs/development/libraries/zeitgeist/dbus_glib.patch +++ /dev/null @@ -1,10 +0,0 @@ ---- configure.ac 2014-01-27 22:45:42.000000000 +0100 -+++ configure.ac.new 2014-05-02 17:25:45.813491239 +0200 -@@ -151,6 +151,7 @@ - gio-2.0 >= $GLIB_REQUIRED - gio-unix-2.0 >= $GLIB_REQUIRED - gtk+-3.0 >= $GTK_REQUIRED -+ dbus-glib-1 - json-glib-1.0 >= $JSON_GLIB_REQUIRED" - - AC_ARG_ENABLE([datahub], diff --git a/pkgs/development/libraries/zeitgeist/default.nix b/pkgs/development/libraries/zeitgeist/default.nix index 3c50de6cc6b7..33cf5dd4af84 100644 --- a/pkgs/development/libraries/zeitgeist/default.nix +++ b/pkgs/development/libraries/zeitgeist/default.nix @@ -1,37 +1,34 @@ -{ stdenv, fetchgit, pkgconfig, glib, sqlite, gnome3, vala_0_38 -, intltool, libtool, dbus_libs, telepathy_glib -, gtk3, json_glib, librdf_raptor2, dbus_glib +{ stdenv, fetchgit, pkgconfig, glib, sqlite, vala_0_38 +, autoconf, automake, libtool, gettext, dbus_libs, telepathy-glib +, gtk3, json-glib, librdf_raptor2, dbus-glib , pythonSupport ? true, python2Packages }: stdenv.mkDerivation rec { - version = "1.0"; + version = "1.0.1"; name = "zeitgeist-${version}"; src = fetchgit { url = "git://anongit.freedesktop.org/git/zeitgeist/zeitgeist"; rev = "v${version}"; - sha256 = "0vw6m0azycqabbz8f0fd8xsh5kf6j3ig4wpqlhw6sklvf44ii5b8"; + sha256 = "1lgqcqr5h9ba751b7ajp7h2w1bb5qza2w3k1f95j3ab15p7q0q44"; }; - configureScript = "./autogen.sh"; + preConfigure = "NOCONFIGURE=1 ./autogen.sh"; configureFlags = [ "--with-session-bus-services-dir=$(out)/share/dbus-1/services" ]; - nativeBuildInputs = [ pkgconfig gnome3.gnome_common intltool libtool vala_0_38 ]; - buildInputs = [ glib sqlite dbus_libs telepathy_glib dbus_glib - gtk3 json_glib librdf_raptor2 python2Packages.rdflib ]; + nativeBuildInputs = [ autoconf automake libtool pkgconfig gettext vala_0_38 python2Packages.python ]; + buildInputs = [ + glib sqlite dbus_libs telepathy-glib dbus-glib + gtk3 json-glib librdf_raptor2 python2Packages.rdflib + ]; prePatch = "patchShebangs ."; - patches = [ ./dbus_glib.patch ]; - - patchFlags = [ "-p0" ]; - enableParallelBuilding = true; - postFixup = '' - '' + stdenv.lib.optionalString pythonSupport '' + postFixup = stdenv.lib.optionalString pythonSupport '' moveToOutput lib/${python2Packages.python.libPrefix} "$py" ''; diff --git a/pkgs/development/libraries/zimg/default.nix b/pkgs/development/libraries/zimg/default.nix index 00973350e185..f67964748dca 100644 --- a/pkgs/development/libraries/zimg/default.nix +++ b/pkgs/development/libraries/zimg/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec{ name = "zimg-${version}"; - version = "2.7"; + version = "2.7.4"; src = fetchFromGitHub { owner = "sekrit-twc"; repo = "zimg"; rev = "release-${version}"; - sha256 = "1jvx3a523mzkc54rrjab9kz66kc6q1snry9ymwmsx7rrd3kv3j6m"; + sha256 = "1gpmf6algpl1g1z891jfnsici84scg2cq1kj4v90glgik9z99mci"; }; nativeBuildInputs = [ autoreconfHook ]; diff --git a/pkgs/development/lisp-modules/clwrapper/cl-wrapper.sh b/pkgs/development/lisp-modules/clwrapper/cl-wrapper.sh index 522d2c252684..65fb6e615f5f 100755 --- a/pkgs/development/lisp-modules/clwrapper/cl-wrapper.sh +++ b/pkgs/development/lisp-modules/clwrapper/cl-wrapper.sh @@ -13,7 +13,7 @@ shift export NIX_LISP NIX_LISP_LOAD_FILE NIX_LISP_EXEC_CODE NIX_LISP_COMMAND NIX_LISP_FINAL_PARAMETERS test -n "$NIX_LISP_LD_LIBRARY_PATH" && - export LD_LIBRARY_PATH="$LD_LIBRARY_PATH${LD_LIBRARY_PATH+:}$NIX_LISP_LD_LIBRARY_PATH" + export LD_LIBRARY_PATH="$LD_LIBRARY_PATH${LD_LIBRARY_PATH:+:}$NIX_LISP_LD_LIBRARY_PATH" declare -a NIX_LISP_FINAL_PARAMETERS; diff --git a/pkgs/development/lisp-modules/define-package.nix b/pkgs/development/lisp-modules/define-package.nix index b13ddf8357f4..390e0e061128 100644 --- a/pkgs/development/lisp-modules/define-package.nix +++ b/pkgs/development/lisp-modules/define-package.nix @@ -33,7 +33,7 @@ let test -n "$LD_LIBRARY_PATH" && echo "export LD_LIBRARY_PATH=\"\$LD_LIBRARY_PATH\''${LD_LIBRARY_PATH:+:}\"'$LD_LIBRARY_PATH'" >> "$path_config_script" test -n "$NIX_LISP_LD_LIBRARY_PATH" && - echo "export NIX_LISP_LD_LIBRARY_PATH=\"\$NIX_LISP_LD_LIBRARY_PATH\''${NIX_LISP_LD_LIBRARY_PATH:+:}\"'$(echo "$NIX_LISP_LD_LIBRARY_PATH" | tr -d '\n' | tr : '\n' | sort | uniq | tr '\n' ':')'" >> "$path_config_script" + echo "export NIX_LISP_LD_LIBRARY_PATH=\"\$NIX_LISP_LD_LIBRARY_PATH\''${NIX_LISP_LD_LIBRARY_PATH:+:}\"'$(echo "$NIX_LISP_LD_LIBRARY_PATH" | tr -d '\n' | tr : '\n' | sort | uniq | tr '\n' ':' | sed -e 's/:$//')'" >> "$path_config_script" echo "fi" >> "$path_config_script" ''; deployLaunchScript = '' @@ -43,7 +43,7 @@ let chmod a+x "$launch_script" echo "#! /bin/sh" >> "$launch_script" echo "source '$config_script'" >> "$launch_script" - echo "export LD_LIBRARY_PATH=\"\$NIX_LISP_LD_LIBRARY_PATH\''${NIX_LISP_LD_LIBRARY_PATH:+:}\$LD_LIBRARY_PATH\"" >> "$launch_script" + echo "test -n \"\$NIX_LISP_LD_LIBRARY_PATH\" export LD_LIBRARY_PATH=\"\$NIX_LISP_LD_LIBRARY_PATH\''${LD_LIBRARY_PATH:+:}\$LD_LIBRARY_PATH\"" >> "$launch_script" echo '"${clwrapper}/bin/common-lisp.sh" "$@"' >> "$launch_script" ''; moveAsdFiles = '' diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/buildnode-xhtml.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/buildnode-xhtml.nix new file mode 100644 index 000000000000..6dbff1d6e56c --- /dev/null +++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/buildnode-xhtml.nix @@ -0,0 +1,49 @@ +args @ { fetchurl, ... }: +rec { + baseName = ''buildnode-xhtml''; + version = ''buildnode-20170403-git''; + + description = ''Tool for building up an xml dom of an excel spreadsheet nicely.''; + + deps = [ args."alexandria" args."babel" args."buildnode" args."cl-interpol" args."cl-ppcre" args."cl-unicode" args."closer-mop" args."closure-common" args."closure-html" args."collectors" args."cxml" args."cxml-dom" args."cxml-klacks" args."cxml-test" args."cxml-xml" args."flexi-streams" args."iterate" args."puri" args."split-sequence" args."swank" args."symbol-munger" args."trivial-features" args."trivial-gray-streams" ]; + + src = fetchurl { + url = ''http://beta.quicklisp.org/archive/buildnode/2017-04-03/buildnode-20170403-git.tgz''; + sha256 = ''1gb3zsp4g31iscvvhvb99z0i7lfn1g3493q6sgpr46fmn2vdwwb6''; + }; + + packageName = "buildnode-xhtml"; + + asdFilesToKeep = ["buildnode-xhtml.asd"]; + overrides = x: x; +} +/* (SYSTEM buildnode-xhtml DESCRIPTION + Tool for building up an xml dom of an excel spreadsheet nicely. SHA256 + 1gb3zsp4g31iscvvhvb99z0i7lfn1g3493q6sgpr46fmn2vdwwb6 URL + http://beta.quicklisp.org/archive/buildnode/2017-04-03/buildnode-20170403-git.tgz + MD5 b917f0d6c20489febbef0d5b954c350d NAME buildnode-xhtml FILENAME + buildnode-xhtml DEPS + ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel) + (NAME buildnode FILENAME buildnode) + (NAME cl-interpol FILENAME cl-interpol) (NAME cl-ppcre FILENAME cl-ppcre) + (NAME cl-unicode FILENAME cl-unicode) + (NAME closer-mop FILENAME closer-mop) + (NAME closure-common FILENAME closure-common) + (NAME closure-html FILENAME closure-html) + (NAME collectors FILENAME collectors) (NAME cxml FILENAME cxml) + (NAME cxml-dom FILENAME cxml-dom) (NAME cxml-klacks FILENAME cxml-klacks) + (NAME cxml-test FILENAME cxml-test) (NAME cxml-xml FILENAME cxml-xml) + (NAME flexi-streams FILENAME flexi-streams) + (NAME iterate FILENAME iterate) (NAME puri FILENAME puri) + (NAME split-sequence FILENAME split-sequence) (NAME swank FILENAME swank) + (NAME symbol-munger FILENAME symbol-munger) + (NAME trivial-features FILENAME trivial-features) + (NAME trivial-gray-streams FILENAME trivial-gray-streams)) + DEPENDENCIES + (alexandria babel buildnode cl-interpol cl-ppcre cl-unicode closer-mop + closure-common closure-html collectors cxml cxml-dom cxml-klacks cxml-test + cxml-xml flexi-streams iterate puri split-sequence swank symbol-munger + trivial-features trivial-gray-streams) + VERSION buildnode-20170403-git SIBLINGS + (buildnode-excel buildnode-html5 buildnode-kml buildnode-xul buildnode) + PARASITES NIL) */ diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/buildnode.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/buildnode.nix new file mode 100644 index 000000000000..ecc1634bfce0 --- /dev/null +++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/buildnode.nix @@ -0,0 +1,50 @@ +args @ { fetchurl, ... }: +rec { + baseName = ''buildnode''; + version = ''20170403-git''; + + parasites = [ "buildnode-test" ]; + + description = ''Tool for building up an xml dom nicely.''; + + deps = [ args."alexandria" args."babel" args."buildnode-xhtml" args."cl-interpol" args."cl-ppcre" args."cl-unicode" args."closer-mop" args."closure-common" args."closure-html" args."collectors" args."cxml" args."cxml-dom" args."cxml-klacks" args."cxml-test" args."cxml-xml" args."flexi-streams" args."iterate" args."lisp-unit2" args."puri" args."split-sequence" args."swank" args."symbol-munger" args."trivial-features" args."trivial-gray-streams" ]; + + src = fetchurl { + url = ''http://beta.quicklisp.org/archive/buildnode/2017-04-03/buildnode-20170403-git.tgz''; + sha256 = ''1gb3zsp4g31iscvvhvb99z0i7lfn1g3493q6sgpr46fmn2vdwwb6''; + }; + + packageName = "buildnode"; + + asdFilesToKeep = ["buildnode.asd"]; + overrides = x: x; +} +/* (SYSTEM buildnode DESCRIPTION Tool for building up an xml dom nicely. SHA256 + 1gb3zsp4g31iscvvhvb99z0i7lfn1g3493q6sgpr46fmn2vdwwb6 URL + http://beta.quicklisp.org/archive/buildnode/2017-04-03/buildnode-20170403-git.tgz + MD5 b917f0d6c20489febbef0d5b954c350d NAME buildnode FILENAME buildnode DEPS + ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel) + (NAME buildnode-xhtml FILENAME buildnode-xhtml) + (NAME cl-interpol FILENAME cl-interpol) (NAME cl-ppcre FILENAME cl-ppcre) + (NAME cl-unicode FILENAME cl-unicode) + (NAME closer-mop FILENAME closer-mop) + (NAME closure-common FILENAME closure-common) + (NAME closure-html FILENAME closure-html) + (NAME collectors FILENAME collectors) (NAME cxml FILENAME cxml) + (NAME cxml-dom FILENAME cxml-dom) (NAME cxml-klacks FILENAME cxml-klacks) + (NAME cxml-test FILENAME cxml-test) (NAME cxml-xml FILENAME cxml-xml) + (NAME flexi-streams FILENAME flexi-streams) + (NAME iterate FILENAME iterate) (NAME lisp-unit2 FILENAME lisp-unit2) + (NAME puri FILENAME puri) (NAME split-sequence FILENAME split-sequence) + (NAME swank FILENAME swank) (NAME symbol-munger FILENAME symbol-munger) + (NAME trivial-features FILENAME trivial-features) + (NAME trivial-gray-streams FILENAME trivial-gray-streams)) + DEPENDENCIES + (alexandria babel buildnode-xhtml cl-interpol cl-ppcre cl-unicode + closer-mop closure-common closure-html collectors cxml cxml-dom + cxml-klacks cxml-test cxml-xml flexi-streams iterate lisp-unit2 puri + split-sequence swank symbol-munger trivial-features trivial-gray-streams) + VERSION 20170403-git SIBLINGS + (buildnode-excel buildnode-html5 buildnode-kml buildnode-xhtml + buildnode-xul) + PARASITES (buildnode-test)) */ diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-html5-parser.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-html5-parser.nix new file mode 100644 index 000000000000..d1ce782e7f84 --- /dev/null +++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-html5-parser.nix @@ -0,0 +1,31 @@ +args @ { fetchurl, ... }: +rec { + baseName = ''cl-html5-parser''; + version = ''20171019-git''; + + description = ''A HTML5 parser for Common Lisp''; + + deps = [ args."cl-ppcre" args."flexi-streams" args."string-case" args."trivial-gray-streams" ]; + + src = fetchurl { + url = ''http://beta.quicklisp.org/archive/cl-html5-parser/2017-10-19/cl-html5-parser-20171019-git.tgz''; + sha256 = ''0ww4r8x27k060krnwq2nb9w93wl9cxqjqil4j1n0fgpbyp2mqn98''; + }; + + packageName = "cl-html5-parser"; + + asdFilesToKeep = ["cl-html5-parser.asd"]; + overrides = x: x; +} +/* (SYSTEM cl-html5-parser DESCRIPTION A HTML5 parser for Common Lisp SHA256 + 0ww4r8x27k060krnwq2nb9w93wl9cxqjqil4j1n0fgpbyp2mqn98 URL + http://beta.quicklisp.org/archive/cl-html5-parser/2017-10-19/cl-html5-parser-20171019-git.tgz + MD5 c4a18ac20668c9aef723954fb901c16b NAME cl-html5-parser FILENAME + cl-html5-parser DEPS + ((NAME cl-ppcre FILENAME cl-ppcre) + (NAME flexi-streams FILENAME flexi-streams) + (NAME string-case FILENAME string-case) + (NAME trivial-gray-streams FILENAME trivial-gray-streams)) + DEPENDENCIES (cl-ppcre flexi-streams string-case trivial-gray-streams) + VERSION 20171019-git SIBLINGS (cl-html5-parser-cxml cl-html5-parser-tests) + PARASITES NIL) */ diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-smtp.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-smtp.nix index 572e3eb4cb38..3ca67723925e 100644 --- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-smtp.nix +++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-smtp.nix @@ -5,7 +5,7 @@ rec { description = ''Common Lisp smtp client.''; - deps = [ args."alexandria" args."babel" args."bordeaux-threads" args."cffi" args."cl+ssl" args."cl-base64" args."flexi-streams" args."split-sequence" args."trivial-features" args."trivial-garbage" args."trivial-gray-streams" args."usocket" ]; + deps = [ args."alexandria" args."babel" args."bordeaux-threads" args."cffi" args."cl_plus_ssl" args."cl-base64" args."flexi-streams" args."split-sequence" args."trivial-features" args."trivial-garbage" args."trivial-gray-streams" args."usocket" ]; src = fetchurl { url = ''http://beta.quicklisp.org/archive/cl-smtp/2018-01-31/cl-smtp-20180131-git.tgz''; @@ -23,7 +23,7 @@ rec { MD5 0ce08f067f145ab4c7528f806f0b51ff NAME cl-smtp FILENAME cl-smtp DEPS ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel) (NAME bordeaux-threads FILENAME bordeaux-threads) - (NAME cffi FILENAME cffi) (NAME cl+ssl FILENAME cl+ssl) + (NAME cffi FILENAME cffi) (NAME cl+ssl FILENAME cl_plus_ssl) (NAME cl-base64 FILENAME cl-base64) (NAME flexi-streams FILENAME flexi-streams) (NAME split-sequence FILENAME split-sequence) diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl+ssl.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl_plus_ssl.nix similarity index 97% rename from pkgs/development/lisp-modules/quicklisp-to-nix-output/cl+ssl.nix rename to pkgs/development/lisp-modules/quicklisp-to-nix-output/cl_plus_ssl.nix index 0243709f3fe1..99aa768c8dfc 100644 --- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl+ssl.nix +++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl_plus_ssl.nix @@ -1,6 +1,6 @@ args @ { fetchurl, ... }: rec { - baseName = ''cl+ssl''; + baseName = ''cl_plus_ssl''; version = ''cl+ssl-20171227-git''; parasites = [ "openssl-1.1.0" ]; @@ -22,7 +22,7 @@ rec { /* (SYSTEM cl+ssl DESCRIPTION Common Lisp interface to OpenSSL. SHA256 1m6wcyccjyrz44mq0v1gvmpi44i9phknym5pimmicx3jvjyr37s4 URL http://beta.quicklisp.org/archive/cl+ssl/2017-12-27/cl+ssl-20171227-git.tgz - MD5 d00ce843db6038e6ff33d19668b5e038 NAME cl+ssl FILENAME cl+ssl DEPS + MD5 d00ce843db6038e6ff33d19668b5e038 NAME cl+ssl FILENAME cl_plus_ssl DEPS ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel) (NAME bordeaux-threads FILENAME bordeaux-threads) (NAME cffi FILENAME cffi) (NAME flexi-streams FILENAME flexi-streams) diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/collectors.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/collectors.nix new file mode 100644 index 000000000000..7375b8dd7094 --- /dev/null +++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/collectors.nix @@ -0,0 +1,35 @@ +args @ { fetchurl, ... }: +rec { + baseName = ''collectors''; + version = ''20161204-git''; + + parasites = [ "collectors-test" ]; + + description = ''A library providing various collector type macros + pulled from arnesi into its own library and stripped of dependencies''; + + deps = [ args."alexandria" args."closer-mop" args."iterate" args."lisp-unit2" args."symbol-munger" ]; + + src = fetchurl { + url = ''http://beta.quicklisp.org/archive/collectors/2016-12-04/collectors-20161204-git.tgz''; + sha256 = ''0cf2y2yxraqs9v54gbj8hhp7s522gz8qfwwc5hvlhl2s7540b2zf''; + }; + + packageName = "collectors"; + + asdFilesToKeep = ["collectors.asd"]; + overrides = x: x; +} +/* (SYSTEM collectors DESCRIPTION + A library providing various collector type macros + pulled from arnesi into its own library and stripped of dependencies + SHA256 0cf2y2yxraqs9v54gbj8hhp7s522gz8qfwwc5hvlhl2s7540b2zf URL + http://beta.quicklisp.org/archive/collectors/2016-12-04/collectors-20161204-git.tgz + MD5 59c8c885a8e512d4f09e73d3e0c97b1f NAME collectors FILENAME collectors + DEPS + ((NAME alexandria FILENAME alexandria) + (NAME closer-mop FILENAME closer-mop) (NAME iterate FILENAME iterate) + (NAME lisp-unit2 FILENAME lisp-unit2) + (NAME symbol-munger FILENAME symbol-munger)) + DEPENDENCIES (alexandria closer-mop iterate lisp-unit2 symbol-munger) + VERSION 20161204-git SIBLINGS NIL PARASITES (collectors-test)) */ diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/css-selectors.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/css-selectors.nix new file mode 100644 index 000000000000..2ad018e5549c --- /dev/null +++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/css-selectors.nix @@ -0,0 +1,52 @@ +args @ { fetchurl, ... }: +rec { + baseName = ''css-selectors''; + version = ''20160628-git''; + + parasites = [ "css-selectors-test" ]; + + description = ''An implementation of css selectors''; + + deps = [ args."alexandria" args."babel" args."buildnode" args."buildnode-xhtml" args."cl-interpol" args."cl-ppcre" args."cl-unicode" args."closer-mop" args."closure-common" args."closure-html" args."collectors" args."cxml" args."cxml-dom" args."cxml-klacks" args."cxml-test" args."cxml-xml" args."flexi-streams" args."iterate" args."lisp-unit2" args."puri" args."split-sequence" args."swank" args."symbol-munger" args."trivial-features" args."trivial-gray-streams" args."yacc" ]; + + src = fetchurl { + url = ''http://beta.quicklisp.org/archive/css-selectors/2016-06-28/css-selectors-20160628-git.tgz''; + sha256 = ''0y9q719w5cv4g7in731q5p98n7pznb05vr7i7wi92mmpah2g1w4b''; + }; + + packageName = "css-selectors"; + + asdFilesToKeep = ["css-selectors.asd"]; + overrides = x: x; +} +/* (SYSTEM css-selectors DESCRIPTION An implementation of css selectors SHA256 + 0y9q719w5cv4g7in731q5p98n7pznb05vr7i7wi92mmpah2g1w4b URL + http://beta.quicklisp.org/archive/css-selectors/2016-06-28/css-selectors-20160628-git.tgz + MD5 28537144b89af4ebe28c2eb365d5569f NAME css-selectors FILENAME + css-selectors DEPS + ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel) + (NAME buildnode FILENAME buildnode) + (NAME buildnode-xhtml FILENAME buildnode-xhtml) + (NAME cl-interpol FILENAME cl-interpol) (NAME cl-ppcre FILENAME cl-ppcre) + (NAME cl-unicode FILENAME cl-unicode) + (NAME closer-mop FILENAME closer-mop) + (NAME closure-common FILENAME closure-common) + (NAME closure-html FILENAME closure-html) + (NAME collectors FILENAME collectors) (NAME cxml FILENAME cxml) + (NAME cxml-dom FILENAME cxml-dom) (NAME cxml-klacks FILENAME cxml-klacks) + (NAME cxml-test FILENAME cxml-test) (NAME cxml-xml FILENAME cxml-xml) + (NAME flexi-streams FILENAME flexi-streams) + (NAME iterate FILENAME iterate) (NAME lisp-unit2 FILENAME lisp-unit2) + (NAME puri FILENAME puri) (NAME split-sequence FILENAME split-sequence) + (NAME swank FILENAME swank) (NAME symbol-munger FILENAME symbol-munger) + (NAME trivial-features FILENAME trivial-features) + (NAME trivial-gray-streams FILENAME trivial-gray-streams) + (NAME yacc FILENAME yacc)) + DEPENDENCIES + (alexandria babel buildnode buildnode-xhtml cl-interpol cl-ppcre cl-unicode + closer-mop closure-common closure-html collectors cxml cxml-dom + cxml-klacks cxml-test cxml-xml flexi-streams iterate lisp-unit2 puri + split-sequence swank symbol-munger trivial-features trivial-gray-streams + yacc) + VERSION 20160628-git SIBLINGS (css-selectors-simple-tree css-selectors-stp) + PARASITES (css-selectors-test)) */ diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/dexador.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/dexador.nix index d6885fc58d8c..f03a95d27b1f 100644 --- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/dexador.nix +++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/dexador.nix @@ -5,7 +5,7 @@ rec { description = ''Yet another HTTP client for Common Lisp''; - deps = [ args."alexandria" args."babel" args."bordeaux-threads" args."cffi" args."cffi-grovel" args."chipz" args."chunga" args."cl+ssl" args."cl-base64" args."cl-cookie" args."cl-fad" args."cl-ppcre" args."cl-reexport" args."cl-utilities" args."fast-http" args."fast-io" args."flexi-streams" args."local-time" args."proc-parse" args."quri" args."smart-buffer" args."split-sequence" args."static-vectors" args."trivial-features" args."trivial-garbage" args."trivial-gray-streams" args."trivial-mimes" args."usocket" args."xsubseq" ]; + deps = [ args."alexandria" args."babel" args."bordeaux-threads" args."cffi" args."cffi-grovel" args."chipz" args."chunga" args."cl_plus_ssl" args."cl-base64" args."cl-cookie" args."cl-fad" args."cl-ppcre" args."cl-reexport" args."cl-utilities" args."fast-http" args."fast-io" args."flexi-streams" args."local-time" args."proc-parse" args."quri" args."smart-buffer" args."split-sequence" args."static-vectors" args."trivial-features" args."trivial-garbage" args."trivial-gray-streams" args."trivial-mimes" args."usocket" args."xsubseq" ]; src = fetchurl { url = ''http://beta.quicklisp.org/archive/dexador/2017-11-30/dexador-20171130-git.tgz''; @@ -25,7 +25,7 @@ rec { (NAME bordeaux-threads FILENAME bordeaux-threads) (NAME cffi FILENAME cffi) (NAME cffi-grovel FILENAME cffi-grovel) (NAME chipz FILENAME chipz) (NAME chunga FILENAME chunga) - (NAME cl+ssl FILENAME cl+ssl) (NAME cl-base64 FILENAME cl-base64) + (NAME cl+ssl FILENAME cl_plus_ssl) (NAME cl-base64 FILENAME cl-base64) (NAME cl-cookie FILENAME cl-cookie) (NAME cl-fad FILENAME cl-fad) (NAME cl-ppcre FILENAME cl-ppcre) (NAME cl-reexport FILENAME cl-reexport) (NAME cl-utilities FILENAME cl-utilities) diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/drakma.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/drakma.nix index 44ce34a2cb33..95162ffc99a3 100644 --- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/drakma.nix +++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/drakma.nix @@ -5,7 +5,7 @@ rec { description = ''Full-featured http/https client based on usocket''; - deps = [ args."alexandria" args."babel" args."bordeaux-threads" args."cffi" args."chipz" args."chunga" args."cl+ssl" args."cl-base64" args."cl-ppcre" args."flexi-streams" args."puri" args."split-sequence" args."trivial-features" args."trivial-garbage" args."trivial-gray-streams" args."usocket" ]; + deps = [ args."alexandria" args."babel" args."bordeaux-threads" args."cffi" args."chipz" args."chunga" args."cl_plus_ssl" args."cl-base64" args."cl-ppcre" args."flexi-streams" args."puri" args."split-sequence" args."trivial-features" args."trivial-garbage" args."trivial-gray-streams" args."usocket" ]; src = fetchurl { url = ''http://beta.quicklisp.org/archive/drakma/2017-08-30/drakma-v2.0.4.tgz''; @@ -24,7 +24,7 @@ rec { ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel) (NAME bordeaux-threads FILENAME bordeaux-threads) (NAME cffi FILENAME cffi) (NAME chipz FILENAME chipz) - (NAME chunga FILENAME chunga) (NAME cl+ssl FILENAME cl+ssl) + (NAME chunga FILENAME chunga) (NAME cl+ssl FILENAME cl_plus_ssl) (NAME cl-base64 FILENAME cl-base64) (NAME cl-ppcre FILENAME cl-ppcre) (NAME flexi-streams FILENAME flexi-streams) (NAME puri FILENAME puri) (NAME split-sequence FILENAME split-sequence) diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/hunchentoot.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/hunchentoot.nix index 6a103b5ac1c5..611ef77256fa 100644 --- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/hunchentoot.nix +++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/hunchentoot.nix @@ -10,7 +10,7 @@ rec { simple framework for user-defined handlers and can be extended through subclassing.''; - deps = [ args."alexandria" args."babel" args."bordeaux-threads" args."cffi" args."chunga" args."cl+ssl" args."cl-base64" args."cl-fad" args."cl-ppcre" args."cl-who" args."cxml-stp" args."drakma" args."flexi-streams" args."md5" args."rfc2388" args."split-sequence" args."swank" args."trivial-backtrace" args."trivial-features" args."trivial-garbage" args."trivial-gray-streams" args."usocket" args."xpath" ]; + deps = [ args."alexandria" args."babel" args."bordeaux-threads" args."cffi" args."chunga" args."cl_plus_ssl" args."cl-base64" args."cl-fad" args."cl-ppcre" args."cl-who" args."cxml-stp" args."drakma" args."flexi-streams" args."md5" args."rfc2388" args."split-sequence" args."swank" args."trivial-backtrace" args."trivial-features" args."trivial-garbage" args."trivial-gray-streams" args."usocket" args."xpath" ]; src = fetchurl { url = ''http://beta.quicklisp.org/archive/hunchentoot/2017-12-27/hunchentoot-v1.2.38.tgz''; @@ -34,7 +34,7 @@ rec { ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel) (NAME bordeaux-threads FILENAME bordeaux-threads) (NAME cffi FILENAME cffi) (NAME chunga FILENAME chunga) - (NAME cl+ssl FILENAME cl+ssl) (NAME cl-base64 FILENAME cl-base64) + (NAME cl+ssl FILENAME cl_plus_ssl) (NAME cl-base64 FILENAME cl-base64) (NAME cl-fad FILENAME cl-fad) (NAME cl-ppcre FILENAME cl-ppcre) (NAME cl-who FILENAME cl-who) (NAME cxml-stp FILENAME cxml-stp) (NAME drakma FILENAME drakma) (NAME flexi-streams FILENAME flexi-streams) diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/pgloader.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/pgloader.nix index da9fe306276f..a913cdbe521c 100644 --- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/pgloader.nix +++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/pgloader.nix @@ -5,7 +5,7 @@ rec { description = ''Load data into PostgreSQL''; - deps = [ args."abnf" args."alexandria" args."anaphora" args."asdf-finalizers" args."asdf-system-connections" args."babel" args."bordeaux-threads" args."cffi" args."chipz" args."chunga" args."cl+ssl" args."cl-base64" args."cl-containers" args."cl-csv" args."cl-fad" args."cl-interpol" args."cl-log" args."cl-markdown" args."cl-postgres" args."cl-ppcre" args."cl-unicode" args."cl-utilities" args."closer-mop" args."command-line-arguments" args."db3" args."drakma" args."dynamic-classes" args."esrap" args."flexi-streams" args."garbage-pools" args."ieee-floats" args."ironclad" args."iterate" args."ixf" args."list-of" args."local-time" args."lparallel" args."md5" args."metabang-bind" args."metatilities-base" args."mssql" args."nibbles" args."parse-number" args."postmodern" args."puri" args."py-configparser" args."qmynd" args."quri" args."s-sql" args."salza2" args."simple-date" args."split-sequence" args."sqlite" args."trivial-backtrace" args."trivial-features" args."trivial-garbage" args."trivial-gray-streams" args."trivial-utf-8" args."uiop" args."usocket" args."uuid" ]; + deps = [ args."abnf" args."alexandria" args."anaphora" args."asdf-finalizers" args."asdf-system-connections" args."babel" args."bordeaux-threads" args."cffi" args."chipz" args."chunga" args."cl_plus_ssl" args."cl-base64" args."cl-containers" args."cl-csv" args."cl-fad" args."cl-interpol" args."cl-log" args."cl-markdown" args."cl-postgres" args."cl-ppcre" args."cl-unicode" args."cl-utilities" args."closer-mop" args."command-line-arguments" args."db3" args."drakma" args."dynamic-classes" args."esrap" args."flexi-streams" args."garbage-pools" args."ieee-floats" args."ironclad" args."iterate" args."ixf" args."list-of" args."local-time" args."lparallel" args."md5" args."metabang-bind" args."metatilities-base" args."mssql" args."nibbles" args."parse-number" args."postmodern" args."puri" args."py-configparser" args."qmynd" args."quri" args."s-sql" args."salza2" args."simple-date" args."split-sequence" args."sqlite" args."trivial-backtrace" args."trivial-features" args."trivial-garbage" args."trivial-gray-streams" args."trivial-utf-8" args."uiop" args."usocket" args."uuid" ]; src = fetchurl { url = ''http://beta.quicklisp.org/archive/pgloader/2017-08-30/pgloader-v3.4.1.tgz''; @@ -28,7 +28,7 @@ rec { (NAME babel FILENAME babel) (NAME bordeaux-threads FILENAME bordeaux-threads) (NAME cffi FILENAME cffi) (NAME chipz FILENAME chipz) - (NAME chunga FILENAME chunga) (NAME cl+ssl FILENAME cl+ssl) + (NAME chunga FILENAME chunga) (NAME cl+ssl FILENAME cl_plus_ssl) (NAME cl-base64 FILENAME cl-base64) (NAME cl-containers FILENAME cl-containers) (NAME cl-csv FILENAME cl-csv) (NAME cl-fad FILENAME cl-fad) (NAME cl-interpol FILENAME cl-interpol) diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/qmynd.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/qmynd.nix index 356c7ff68642..de24a5984960 100644 --- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/qmynd.nix +++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/qmynd.nix @@ -5,7 +5,7 @@ rec { description = ''MySQL Native Driver''; - deps = [ args."alexandria" args."asdf-finalizers" args."babel" args."bordeaux-threads" args."cffi" args."chipz" args."cl+ssl" args."flexi-streams" args."ironclad" args."list-of" args."nibbles" args."salza2" args."split-sequence" args."trivial-features" args."trivial-garbage" args."trivial-gray-streams" args."usocket" ]; + deps = [ args."alexandria" args."asdf-finalizers" args."babel" args."bordeaux-threads" args."cffi" args."chipz" args."cl_plus_ssl" args."flexi-streams" args."ironclad" args."list-of" args."nibbles" args."salza2" args."split-sequence" args."trivial-features" args."trivial-garbage" args."trivial-gray-streams" args."usocket" ]; src = fetchurl { url = ''http://beta.quicklisp.org/archive/qmynd/2018-01-31/qmynd-20180131-git.tgz''; @@ -26,7 +26,8 @@ rec { (NAME babel FILENAME babel) (NAME bordeaux-threads FILENAME bordeaux-threads) (NAME cffi FILENAME cffi) (NAME chipz FILENAME chipz) - (NAME cl+ssl FILENAME cl+ssl) (NAME flexi-streams FILENAME flexi-streams) + (NAME cl+ssl FILENAME cl_plus_ssl) + (NAME flexi-streams FILENAME flexi-streams) (NAME ironclad FILENAME ironclad) (NAME list-of FILENAME list-of) (NAME nibbles FILENAME nibbles) (NAME salza2 FILENAME salza2) (NAME split-sequence FILENAME split-sequence) diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/string-case.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/string-case.nix new file mode 100644 index 000000000000..7f5cc1e048de --- /dev/null +++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/string-case.nix @@ -0,0 +1,25 @@ +args @ { fetchurl, ... }: +rec { + baseName = ''string-case''; + version = ''20151218-git''; + + description = ''string-case is a macro that generates specialised decision trees to dispatch on string equality''; + + deps = [ ]; + + src = fetchurl { + url = ''http://beta.quicklisp.org/archive/string-case/2015-12-18/string-case-20151218-git.tgz''; + sha256 = ''0l7bcysm1hwxaxxbld9fs0hj30739wf2ys3n6fhfdy9m5rz1cfbw''; + }; + + packageName = "string-case"; + + asdFilesToKeep = ["string-case.asd"]; + overrides = x: x; +} +/* (SYSTEM string-case DESCRIPTION + string-case is a macro that generates specialised decision trees to dispatch on string equality + SHA256 0l7bcysm1hwxaxxbld9fs0hj30739wf2ys3n6fhfdy9m5rz1cfbw URL + http://beta.quicklisp.org/archive/string-case/2015-12-18/string-case-20151218-git.tgz + MD5 fb747ba1276f0173f875876425b1acc3 NAME string-case FILENAME string-case + DEPS NIL DEPENDENCIES NIL VERSION 20151218-git SIBLINGS NIL PARASITES NIL) */ diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/xembed.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/xembed.nix new file mode 100644 index 000000000000..4c88e839bdab --- /dev/null +++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/xembed.nix @@ -0,0 +1,25 @@ +args @ { fetchurl, ... }: +rec { + baseName = ''xembed''; + version = ''clx-20120909-git''; + + description = ''''; + + deps = [ args."clx" ]; + + src = fetchurl { + url = ''http://beta.quicklisp.org/archive/clx-xembed/2012-09-09/clx-xembed-20120909-git.tgz''; + sha256 = ''06h2md0lb0sribpkg5k7z7fnc02k0ssaswcimg2ya8wqypj4rlbb''; + }; + + packageName = "xembed"; + + asdFilesToKeep = ["xembed.asd"]; + overrides = x: x; +} +/* (SYSTEM xembed DESCRIPTION NIL SHA256 + 06h2md0lb0sribpkg5k7z7fnc02k0ssaswcimg2ya8wqypj4rlbb URL + http://beta.quicklisp.org/archive/clx-xembed/2012-09-09/clx-xembed-20120909-git.tgz + MD5 4270362697093017ac0243b71e3576f9 NAME xembed FILENAME xembed DEPS + ((NAME clx FILENAME clx)) DEPENDENCIES (clx) VERSION clx-20120909-git + SIBLINGS NIL PARASITES NIL) */ diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-overrides.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-overrides.nix index 9a7fb3e5d1b8..0c12f169cf7b 100644 --- a/pkgs/development/lisp-modules/quicklisp-to-nix-overrides.nix +++ b/pkgs/development/lisp-modules/quicklisp-to-nix-overrides.nix @@ -46,7 +46,7 @@ in cxml = skipBuildPhase; wookie = addNativeLibs (with pkgs; [libuv openssl]); lev = addNativeLibs [pkgs.libev]; - "cl+ssl" = addNativeLibs [pkgs.openssl]; + cl_plus_ssl = addNativeLibs [pkgs.openssl]; cl-colors = skipBuildPhase; cl-libuv = addNativeLibs [pkgs.libuv]; cl-async-ssl = addNativeLibs [pkgs.openssl]; @@ -154,4 +154,8 @@ $out/lib/common-lisp/query-fs" ]; asdFilesToKeep = x.asdFilesToKeep ++ ["simple-date.asd"]; }; + buildnode = x: { + deps = pkgs.lib.filter (x: x.name != quicklisp-to-nix-packages.buildnode-xhtml.name) x.deps; + parasites = pkgs.lib.filter (x: x!= "buildnode-test") x.parasites; + }; } diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-systems.txt b/pkgs/development/lisp-modules/quicklisp-to-nix-systems.txt index ebf09c43a0e0..b133c3009ae6 100644 --- a/pkgs/development/lisp-modules/quicklisp-to-nix-systems.txt +++ b/pkgs/development/lisp-modules/quicklisp-to-nix-systems.txt @@ -21,11 +21,13 @@ cl-base64 cl-cli cl-colors cl-cookie +cl-csv cl-dbi cl-emb cl-fuse cl-fuse-meta-fs cl-html-parse +cl-html5-parser cl-json cl-l10n cl-libuv @@ -55,8 +57,10 @@ cl-vectors cl-who clx clx-truetype +xembed command-line-arguments css-lite +css-selectors cxml dbd-mysql dbd-postgres diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix.nix b/pkgs/development/lisp-modules/quicklisp-to-nix.nix index e931c12f1e72..8ea7d4700bd6 100644 --- a/pkgs/development/lisp-modules/quicklisp-to-nix.nix +++ b/pkgs/development/lisp-modules/quicklisp-to-nix.nix @@ -6,34 +6,9 @@ let quicklisp-to-nix-packages = rec { buildLispPackage = callPackage ./define-package.nix; qlOverrides = callPackage ./quicklisp-to-nix-overrides.nix {}; - "symbol-munger" = buildLispPackage - ((f: x: (x // (f x))) - (qlOverrides."symbol-munger" or (x: {})) - (import ./quicklisp-to-nix-output/symbol-munger.nix { - inherit fetchurl; - "alexandria" = quicklisp-to-nix-packages."alexandria"; - "iterate" = quicklisp-to-nix-packages."iterate"; - })); - - "cl-postgres_slash_tests" = quicklisp-to-nix-packages."cl-postgres"; - "lisp-unit2" = buildLispPackage - ((f: x: (x // (f x))) - (qlOverrides."lisp-unit2" or (x: {})) - (import ./quicklisp-to-nix-output/lisp-unit2.nix { - inherit fetchurl; - "alexandria" = quicklisp-to-nix-packages."alexandria"; - "cl-interpol" = quicklisp-to-nix-packages."cl-interpol"; - "cl-ppcre" = quicklisp-to-nix-packages."cl-ppcre"; - "cl-unicode" = quicklisp-to-nix-packages."cl-unicode"; - "flexi-streams" = quicklisp-to-nix-packages."flexi-streams"; - "iterate" = quicklisp-to-nix-packages."iterate"; - "symbol-munger" = quicklisp-to-nix-packages."symbol-munger"; - })); - - "moptilities" = buildLispPackage ((f: x: (x // (f x))) (qlOverrides."moptilities" or (x: {})) @@ -54,14 +29,6 @@ let quicklisp-to-nix-packages = rec { })); - "yacc" = buildLispPackage - ((f: x: (x // (f x))) - (qlOverrides."yacc" or (x: {})) - (import ./quicklisp-to-nix-output/yacc.nix { - inherit fetchurl; - })); - - "simple-date_slash_postgres-glue" = quicklisp-to-nix-packages."simple-date"; @@ -135,7 +102,7 @@ let quicklisp-to-nix-packages = rec { "bordeaux-threads" = quicklisp-to-nix-packages."bordeaux-threads"; "cffi" = quicklisp-to-nix-packages."cffi"; "chipz" = quicklisp-to-nix-packages."chipz"; - "cl+ssl" = quicklisp-to-nix-packages."cl+ssl"; + "cl_plus_ssl" = quicklisp-to-nix-packages."cl_plus_ssl"; "flexi-streams" = quicklisp-to-nix-packages."flexi-streams"; "ironclad" = quicklisp-to-nix-packages."ironclad"; "list-of" = quicklisp-to-nix-packages."list-of"; @@ -280,32 +247,6 @@ let quicklisp-to-nix-packages = rec { })); - "cl-interpol" = buildLispPackage - ((f: x: (x // (f x))) - (qlOverrides."cl-interpol" or (x: {})) - (import ./quicklisp-to-nix-output/cl-interpol.nix { - inherit fetchurl; - "cl-ppcre" = quicklisp-to-nix-packages."cl-ppcre"; - "cl-unicode" = quicklisp-to-nix-packages."cl-unicode"; - "flexi-streams" = quicklisp-to-nix-packages."flexi-streams"; - })); - - - "cl-csv" = buildLispPackage - ((f: x: (x // (f x))) - (qlOverrides."cl-csv" or (x: {})) - (import ./quicklisp-to-nix-output/cl-csv.nix { - inherit fetchurl; - "alexandria" = quicklisp-to-nix-packages."alexandria"; - "cl-interpol" = quicklisp-to-nix-packages."cl-interpol"; - "cl-ppcre" = quicklisp-to-nix-packages."cl-ppcre"; - "cl-unicode" = quicklisp-to-nix-packages."cl-unicode"; - "flexi-streams" = quicklisp-to-nix-packages."flexi-streams"; - "iterate" = quicklisp-to-nix-packages."iterate"; - "lisp-unit2" = quicklisp-to-nix-packages."lisp-unit2"; - })); - - "cl-containers" = buildLispPackage ((f: x: (x // (f x))) (qlOverrides."cl-containers" or (x: {})) @@ -425,14 +366,6 @@ let quicklisp-to-nix-packages = rec { })); - "swank" = buildLispPackage - ((f: x: (x // (f x))) - (qlOverrides."swank" or (x: {})) - (import ./quicklisp-to-nix-output/swank.nix { - inherit fetchurl; - })); - - "rfc2388" = buildLispPackage ((f: x: (x // (f x))) (qlOverrides."rfc2388" or (x: {})) @@ -524,6 +457,108 @@ let quicklisp-to-nix-packages = rec { })); + "yacc" = buildLispPackage + ((f: x: (x // (f x))) + (qlOverrides."yacc" or (x: {})) + (import ./quicklisp-to-nix-output/yacc.nix { + inherit fetchurl; + })); + + + "symbol-munger" = buildLispPackage + ((f: x: (x // (f x))) + (qlOverrides."symbol-munger" or (x: {})) + (import ./quicklisp-to-nix-output/symbol-munger.nix { + inherit fetchurl; + "alexandria" = quicklisp-to-nix-packages."alexandria"; + "iterate" = quicklisp-to-nix-packages."iterate"; + })); + + + "swank" = buildLispPackage + ((f: x: (x // (f x))) + (qlOverrides."swank" or (x: {})) + (import ./quicklisp-to-nix-output/swank.nix { + inherit fetchurl; + })); + + + "collectors" = buildLispPackage + ((f: x: (x // (f x))) + (qlOverrides."collectors" or (x: {})) + (import ./quicklisp-to-nix-output/collectors.nix { + inherit fetchurl; + "alexandria" = quicklisp-to-nix-packages."alexandria"; + "closer-mop" = quicklisp-to-nix-packages."closer-mop"; + "iterate" = quicklisp-to-nix-packages."iterate"; + "lisp-unit2" = quicklisp-to-nix-packages."lisp-unit2"; + "symbol-munger" = quicklisp-to-nix-packages."symbol-munger"; + })); + + + "buildnode-xhtml" = buildLispPackage + ((f: x: (x // (f x))) + (qlOverrides."buildnode-xhtml" or (x: {})) + (import ./quicklisp-to-nix-output/buildnode-xhtml.nix { + inherit fetchurl; + "alexandria" = quicklisp-to-nix-packages."alexandria"; + "babel" = quicklisp-to-nix-packages."babel"; + "buildnode" = quicklisp-to-nix-packages."buildnode"; + "cl-interpol" = quicklisp-to-nix-packages."cl-interpol"; + "cl-ppcre" = quicklisp-to-nix-packages."cl-ppcre"; + "cl-unicode" = quicklisp-to-nix-packages."cl-unicode"; + "closer-mop" = quicklisp-to-nix-packages."closer-mop"; + "closure-common" = quicklisp-to-nix-packages."closure-common"; + "closure-html" = quicklisp-to-nix-packages."closure-html"; + "collectors" = quicklisp-to-nix-packages."collectors"; + "cxml" = quicklisp-to-nix-packages."cxml"; + "cxml-dom" = quicklisp-to-nix-packages."cxml-dom"; + "cxml-klacks" = quicklisp-to-nix-packages."cxml-klacks"; + "cxml-test" = quicklisp-to-nix-packages."cxml-test"; + "cxml-xml" = quicklisp-to-nix-packages."cxml-xml"; + "flexi-streams" = quicklisp-to-nix-packages."flexi-streams"; + "iterate" = quicklisp-to-nix-packages."iterate"; + "puri" = quicklisp-to-nix-packages."puri"; + "split-sequence" = quicklisp-to-nix-packages."split-sequence"; + "swank" = quicklisp-to-nix-packages."swank"; + "symbol-munger" = quicklisp-to-nix-packages."symbol-munger"; + "trivial-features" = quicklisp-to-nix-packages."trivial-features"; + "trivial-gray-streams" = quicklisp-to-nix-packages."trivial-gray-streams"; + })); + + + "buildnode" = buildLispPackage + ((f: x: (x // (f x))) + (qlOverrides."buildnode" or (x: {})) + (import ./quicklisp-to-nix-output/buildnode.nix { + inherit fetchurl; + "alexandria" = quicklisp-to-nix-packages."alexandria"; + "babel" = quicklisp-to-nix-packages."babel"; + "buildnode-xhtml" = quicklisp-to-nix-packages."buildnode-xhtml"; + "cl-interpol" = quicklisp-to-nix-packages."cl-interpol"; + "cl-ppcre" = quicklisp-to-nix-packages."cl-ppcre"; + "cl-unicode" = quicklisp-to-nix-packages."cl-unicode"; + "closer-mop" = quicklisp-to-nix-packages."closer-mop"; + "closure-common" = quicklisp-to-nix-packages."closure-common"; + "closure-html" = quicklisp-to-nix-packages."closure-html"; + "collectors" = quicklisp-to-nix-packages."collectors"; + "cxml" = quicklisp-to-nix-packages."cxml"; + "cxml-dom" = quicklisp-to-nix-packages."cxml-dom"; + "cxml-klacks" = quicklisp-to-nix-packages."cxml-klacks"; + "cxml-test" = quicklisp-to-nix-packages."cxml-test"; + "cxml-xml" = quicklisp-to-nix-packages."cxml-xml"; + "flexi-streams" = quicklisp-to-nix-packages."flexi-streams"; + "iterate" = quicklisp-to-nix-packages."iterate"; + "lisp-unit2" = quicklisp-to-nix-packages."lisp-unit2"; + "puri" = quicklisp-to-nix-packages."puri"; + "split-sequence" = quicklisp-to-nix-packages."split-sequence"; + "swank" = quicklisp-to-nix-packages."swank"; + "symbol-munger" = quicklisp-to-nix-packages."symbol-munger"; + "trivial-features" = quicklisp-to-nix-packages."trivial-features"; + "trivial-gray-streams" = quicklisp-to-nix-packages."trivial-gray-streams"; + })); + + "zpb-ttf" = buildLispPackage ((f: x: (x // (f x))) (qlOverrides."zpb-ttf" or (x: {})) @@ -689,6 +724,14 @@ let quicklisp-to-nix-packages = rec { })); + "string-case" = buildLispPackage + ((f: x: (x // (f x))) + (qlOverrides."string-case" or (x: {})) + (import ./quicklisp-to-nix-output/string-case.nix { + inherit fetchurl; + })); + + "pcall-queue" = buildLispPackage ((f: x: (x // (f x))) (qlOverrides."pcall-queue" or (x: {})) @@ -716,6 +759,32 @@ let quicklisp-to-nix-packages = rec { })); + "lisp-unit2" = buildLispPackage + ((f: x: (x // (f x))) + (qlOverrides."lisp-unit2" or (x: {})) + (import ./quicklisp-to-nix-output/lisp-unit2.nix { + inherit fetchurl; + "alexandria" = quicklisp-to-nix-packages."alexandria"; + "cl-interpol" = quicklisp-to-nix-packages."cl-interpol"; + "cl-ppcre" = quicklisp-to-nix-packages."cl-ppcre"; + "cl-unicode" = quicklisp-to-nix-packages."cl-unicode"; + "flexi-streams" = quicklisp-to-nix-packages."flexi-streams"; + "iterate" = quicklisp-to-nix-packages."iterate"; + "symbol-munger" = quicklisp-to-nix-packages."symbol-munger"; + })); + + + "cl-interpol" = buildLispPackage + ((f: x: (x // (f x))) + (qlOverrides."cl-interpol" or (x: {})) + (import ./quicklisp-to-nix-output/cl-interpol.nix { + inherit fetchurl; + "cl-ppcre" = quicklisp-to-nix-packages."cl-ppcre"; + "cl-unicode" = quicklisp-to-nix-packages."cl-unicode"; + "flexi-streams" = quicklisp-to-nix-packages."flexi-streams"; + })); + + "lift" = buildLispPackage ((f: x: (x // (f x))) (qlOverrides."lift" or (x: {})) @@ -1236,7 +1305,7 @@ let quicklisp-to-nix-packages = rec { "cffi" = quicklisp-to-nix-packages."cffi"; "chipz" = quicklisp-to-nix-packages."chipz"; "chunga" = quicklisp-to-nix-packages."chunga"; - "cl+ssl" = quicklisp-to-nix-packages."cl+ssl"; + "cl_plus_ssl" = quicklisp-to-nix-packages."cl_plus_ssl"; "cl-base64" = quicklisp-to-nix-packages."cl-base64"; "cl-containers" = quicklisp-to-nix-packages."cl-containers"; "cl-csv" = quicklisp-to-nix-packages."cl-csv"; @@ -1490,7 +1559,7 @@ let quicklisp-to-nix-packages = rec { "bordeaux-threads" = quicklisp-to-nix-packages."bordeaux-threads"; "cffi" = quicklisp-to-nix-packages."cffi"; "chunga" = quicklisp-to-nix-packages."chunga"; - "cl+ssl" = quicklisp-to-nix-packages."cl+ssl"; + "cl_plus_ssl" = quicklisp-to-nix-packages."cl_plus_ssl"; "cl-base64" = quicklisp-to-nix-packages."cl-base64"; "cl-fad" = quicklisp-to-nix-packages."cl-fad"; "cl-ppcre" = quicklisp-to-nix-packages."cl-ppcre"; @@ -1660,7 +1729,7 @@ let quicklisp-to-nix-packages = rec { "cffi" = quicklisp-to-nix-packages."cffi"; "chipz" = quicklisp-to-nix-packages."chipz"; "chunga" = quicklisp-to-nix-packages."chunga"; - "cl+ssl" = quicklisp-to-nix-packages."cl+ssl"; + "cl_plus_ssl" = quicklisp-to-nix-packages."cl_plus_ssl"; "cl-base64" = quicklisp-to-nix-packages."cl-base64"; "cl-ppcre" = quicklisp-to-nix-packages."cl-ppcre"; "flexi-streams" = quicklisp-to-nix-packages."flexi-streams"; @@ -1694,7 +1763,7 @@ let quicklisp-to-nix-packages = rec { "cffi-grovel" = quicklisp-to-nix-packages."cffi-grovel"; "chipz" = quicklisp-to-nix-packages."chipz"; "chunga" = quicklisp-to-nix-packages."chunga"; - "cl+ssl" = quicklisp-to-nix-packages."cl+ssl"; + "cl_plus_ssl" = quicklisp-to-nix-packages."cl_plus_ssl"; "cl-base64" = quicklisp-to-nix-packages."cl-base64"; "cl-cookie" = quicklisp-to-nix-packages."cl-cookie"; "cl-fad" = quicklisp-to-nix-packages."cl-fad"; @@ -1801,6 +1870,40 @@ let quicklisp-to-nix-packages = rec { })); + "css-selectors" = buildLispPackage + ((f: x: (x // (f x))) + (qlOverrides."css-selectors" or (x: {})) + (import ./quicklisp-to-nix-output/css-selectors.nix { + inherit fetchurl; + "alexandria" = quicklisp-to-nix-packages."alexandria"; + "babel" = quicklisp-to-nix-packages."babel"; + "buildnode" = quicklisp-to-nix-packages."buildnode"; + "buildnode-xhtml" = quicklisp-to-nix-packages."buildnode-xhtml"; + "cl-interpol" = quicklisp-to-nix-packages."cl-interpol"; + "cl-ppcre" = quicklisp-to-nix-packages."cl-ppcre"; + "cl-unicode" = quicklisp-to-nix-packages."cl-unicode"; + "closer-mop" = quicklisp-to-nix-packages."closer-mop"; + "closure-common" = quicklisp-to-nix-packages."closure-common"; + "closure-html" = quicklisp-to-nix-packages."closure-html"; + "collectors" = quicklisp-to-nix-packages."collectors"; + "cxml" = quicklisp-to-nix-packages."cxml"; + "cxml-dom" = quicklisp-to-nix-packages."cxml-dom"; + "cxml-klacks" = quicklisp-to-nix-packages."cxml-klacks"; + "cxml-test" = quicklisp-to-nix-packages."cxml-test"; + "cxml-xml" = quicklisp-to-nix-packages."cxml-xml"; + "flexi-streams" = quicklisp-to-nix-packages."flexi-streams"; + "iterate" = quicklisp-to-nix-packages."iterate"; + "lisp-unit2" = quicklisp-to-nix-packages."lisp-unit2"; + "puri" = quicklisp-to-nix-packages."puri"; + "split-sequence" = quicklisp-to-nix-packages."split-sequence"; + "swank" = quicklisp-to-nix-packages."swank"; + "symbol-munger" = quicklisp-to-nix-packages."symbol-munger"; + "trivial-features" = quicklisp-to-nix-packages."trivial-features"; + "trivial-gray-streams" = quicklisp-to-nix-packages."trivial-gray-streams"; + "yacc" = quicklisp-to-nix-packages."yacc"; + })); + + "css-lite" = buildLispPackage ((f: x: (x // (f x))) (qlOverrides."css-lite" or (x: {})) @@ -1817,6 +1920,15 @@ let quicklisp-to-nix-packages = rec { })); + "xembed" = buildLispPackage + ((f: x: (x // (f x))) + (qlOverrides."xembed" or (x: {})) + (import ./quicklisp-to-nix-output/xembed.nix { + inherit fetchurl; + "clx" = quicklisp-to-nix-packages."clx"; + })); + + "clx-truetype" = buildLispPackage ((f: x: (x // (f x))) (qlOverrides."clx-truetype" or (x: {})) @@ -1941,10 +2053,10 @@ let quicklisp-to-nix-packages = rec { })); - "cl+ssl" = buildLispPackage + "cl_plus_ssl" = buildLispPackage ((f: x: (x // (f x))) - (qlOverrides."cl+ssl" or (x: {})) - (import ./quicklisp-to-nix-output/cl+ssl.nix { + (qlOverrides."cl_plus_ssl" or (x: {})) + (import ./quicklisp-to-nix-output/cl_plus_ssl.nix { inherit fetchurl; "alexandria" = quicklisp-to-nix-packages."alexandria"; "babel" = quicklisp-to-nix-packages."babel"; @@ -2021,7 +2133,7 @@ let quicklisp-to-nix-packages = rec { "babel" = quicklisp-to-nix-packages."babel"; "bordeaux-threads" = quicklisp-to-nix-packages."bordeaux-threads"; "cffi" = quicklisp-to-nix-packages."cffi"; - "cl+ssl" = quicklisp-to-nix-packages."cl+ssl"; + "cl_plus_ssl" = quicklisp-to-nix-packages."cl_plus_ssl"; "cl-base64" = quicklisp-to-nix-packages."cl-base64"; "flexi-streams" = quicklisp-to-nix-packages."flexi-streams"; "split-sequence" = quicklisp-to-nix-packages."split-sequence"; @@ -2171,6 +2283,18 @@ let quicklisp-to-nix-packages = rec { })); + "cl-html5-parser" = buildLispPackage + ((f: x: (x // (f x))) + (qlOverrides."cl-html5-parser" or (x: {})) + (import ./quicklisp-to-nix-output/cl-html5-parser.nix { + inherit fetchurl; + "cl-ppcre" = quicklisp-to-nix-packages."cl-ppcre"; + "flexi-streams" = quicklisp-to-nix-packages."flexi-streams"; + "string-case" = quicklisp-to-nix-packages."string-case"; + "trivial-gray-streams" = quicklisp-to-nix-packages."trivial-gray-streams"; + })); + + "cl-html-parse" = buildLispPackage ((f: x: (x // (f x))) (qlOverrides."cl-html-parse" or (x: {})) @@ -2245,6 +2369,21 @@ let quicklisp-to-nix-packages = rec { })); + "cl-csv" = buildLispPackage + ((f: x: (x // (f x))) + (qlOverrides."cl-csv" or (x: {})) + (import ./quicklisp-to-nix-output/cl-csv.nix { + inherit fetchurl; + "alexandria" = quicklisp-to-nix-packages."alexandria"; + "cl-interpol" = quicklisp-to-nix-packages."cl-interpol"; + "cl-ppcre" = quicklisp-to-nix-packages."cl-ppcre"; + "cl-unicode" = quicklisp-to-nix-packages."cl-unicode"; + "flexi-streams" = quicklisp-to-nix-packages."flexi-streams"; + "iterate" = quicklisp-to-nix-packages."iterate"; + "lisp-unit2" = quicklisp-to-nix-packages."lisp-unit2"; + })); + + "cl-cookie" = buildLispPackage ((f: x: (x // (f x))) (qlOverrides."cl-cookie" or (x: {})) diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix/ql-to-nix.lisp b/pkgs/development/lisp-modules/quicklisp-to-nix/ql-to-nix.lisp index 63d6f3305194..3824a04826f1 100644 --- a/pkgs/development/lisp-modules/quicklisp-to-nix/ql-to-nix.lisp +++ b/pkgs/development/lisp-modules/quicklisp-to-nix/ql-to-nix.lisp @@ -55,6 +55,7 @@ (#\\ "_backslash_") (#\_ "__") (#\. "_dot_") + (#\+ "_plus_") (t x))))) (defvar *system-info-bin* diff --git a/pkgs/development/lua-modules/generic/default.nix b/pkgs/development/lua-modules/generic/default.nix index 7152d0b9e360..091ae06ab910 100644 --- a/pkgs/development/lua-modules/generic/default.nix +++ b/pkgs/development/lua-modules/generic/default.nix @@ -1,4 +1,4 @@ -lua: +{ lua, writeText }: { buildInputs ? [], disabled ? false, ... } @ attrs: @@ -19,5 +19,36 @@ else { name = "lua${lua.luaversion}-" + attrs.name; buildInputs = buildInputs ++ [ lua ]; + + setupHook = writeText "setup-hook.sh" '' + # check for lua/clua modules and don't add duplicates + + addLuaLibPath() { + local package_path="$1/share/lua/${lua.luaversion}" + if [[ ! -d $package_path ]]; then return; fi + if [[ $LUA_PATH = *"$package_path"* ]]; then return; fi + + if [[ -z $LUA_PATH ]]; then + export LUA_PATH="$package_path/?.lua" + else + export LUA_PATH="$LUA_PATH;$package_path/?.lua" + fi + } + + addLuaLibCPath() { + local package_cpath="$1/lib/lua/${lua.luaversion}" + if [[ ! -d $package_cpath ]]; then return; fi + if [[ $LUA_CPATH = *"$package_cpath"* ]]; then return; fi + + if [[ -z $LUA_CPATH ]]; then + export LUA_CPATH="$package_cpath/?.so" + else + export LUA_CPATH="$LUA_CPATH;$package_cpath/?.so" + fi + } + + addEnvHooks "$hostOffset" addLuaLibPath + addEnvHooks "$hostOffset" addLuaLibCPath + ''; } ) diff --git a/pkgs/development/mobile/androidenv/androidndk-pkgs.nix b/pkgs/development/mobile/androidenv/androidndk-pkgs.nix new file mode 100644 index 000000000000..19fc0dc812d8 --- /dev/null +++ b/pkgs/development/mobile/androidenv/androidndk-pkgs.nix @@ -0,0 +1,82 @@ +{ lib, hostPlatform, targetPlatform +, makeWrapper +, runCommand, wrapBintoolsWith, wrapCCWith +, buildAndroidndk, androidndk, targetAndroidndkPkgs +}: + +let + # Mapping from a platform to information needed to unpack NDK stuff for that + # platform. + # + # N.B. The Android NDK uses slightly different LLVM-style platform triples + # than we do. We don't just use theirs because ours are less ambiguous and + # some builds need that clarity. + ndkInfoFun = { config, ... }: { + "x86_64-unknown-linux-gnu" = { + double = "linux-x86_64"; + }; + "arm-unknown-linux-androideabi" = { + arch = "arm"; + triple = "arm-linux-androideabi"; + gccVer = "4.8"; + }; + "aarch64-unknown-linux-android" = { + arch = "arm64"; + triple = "aarch64-linux-android"; + gccVer = "4.9"; + }; + }.${config} or + (throw "Android NDK doesn't support ${config}, as far as we know"); + + hostInfo = ndkInfoFun hostPlatform; + targetInfo = ndkInfoFun targetPlatform; + +in + +rec { + # Misc tools + binaries = let + ndkBinDir = + "${androidndk}/libexec/${androidndk.name}/toolchains/${targetInfo.triple}-${targetInfo.gccVer}/prebuilt/${hostInfo.double}/bin"; + in runCommand "ndk-gcc-binutils" { + isGNU = true; # for cc-wrapper + nativeBuildInputs = [ makeWrapper ]; + propgatedBuildInputs = [ androidndk ]; + } '' + mkdir -p $out/bin + for prog in ${ndkBinDir}/${targetInfo.triple}-*; do + prog_suffix=$(basename $prog | sed 's/${targetInfo.triple}-//') + ln -s $prog $out/bin/${targetPlatform.config}-$prog_suffix + done + ''; + + binutils = wrapBintoolsWith { + bintools = binaries; + libc = targetAndroidndkPkgs.libraries; + }; + + gcc = wrapCCWith { + cc = binaries; + bintools = binutils; + libc = targetAndroidndkPkgs.libraries; + extraBuildCommands = + # GCC 4.9 is the first relase with "-fstack-protector" + lib.optionalString (lib.versionOlder targetInfo.gccVer "4.9") '' + sed -E \ + -i $out/nix-support/add-hardening.sh \ + -e 's|(-fstack-protector)-strong|\1|g' + ''; + }; + + # Bionic lib C and other libraries. + # + # We use androidndk from the previous stage, else we waste time or get cycles + # cross-compiling packages to wrap incorrectly wrap binaries we don't include + # anyways. + libraries = { + name = "bionic-prebuilt"; + type = "derivation"; + outPath = "${buildAndroidndk}/libexec/${buildAndroidndk.name}/platforms/android-21/arch-${hostInfo.arch}/usr/"; + drvPath = throw "fake derivation, build ${buildAndroidndk} to use"; + }; +} diff --git a/pkgs/development/mobile/androidenv/androidndk.nix b/pkgs/development/mobile/androidenv/androidndk.nix index 8ef58471d6a0..81ec5732b9a2 100644 --- a/pkgs/development/mobile/androidenv/androidndk.nix +++ b/pkgs/development/mobile/androidenv/androidndk.nix @@ -21,7 +21,7 @@ stdenv.mkDerivation rec { phases = "buildPhase"; - buildInputs = [ p7zip makeWrapper ]; + nativeBuildInputs = [ p7zip makeWrapper ]; buildCommand = let bin_path = "$out/bin"; diff --git a/pkgs/development/mobile/androidenv/androidndk_r8e.nix b/pkgs/development/mobile/androidenv/androidndk_r8e.nix index ccf22d6b9536..271a18e4ee06 100644 --- a/pkgs/development/mobile/androidenv/androidndk_r8e.nix +++ b/pkgs/development/mobile/androidenv/androidndk_r8e.nix @@ -21,7 +21,7 @@ stdenv.mkDerivation rec { phases = "buildPhase"; - buildInputs = [ makeWrapper ]; + nativeBuildInputs = [ makeWrapper ]; buildCommand = let bin_path = "$out/bin"; diff --git a/pkgs/development/mobile/androidenv/default.nix b/pkgs/development/mobile/androidenv/default.nix index 470fb31b03b0..c053712302dd 100644 --- a/pkgs/development/mobile/androidenv/default.nix +++ b/pkgs/development/mobile/androidenv/default.nix @@ -1,10 +1,12 @@ -{pkgs, pkgs_i686, includeSources ? true}: +{ buildPackages, pkgs, pkgs_i686, targetPackages +, includeSources ? true +}: rec { platformTools = import ./platform-tools.nix { - inherit (pkgs) stdenv fetchurl unzip zlib; + inherit buildPackages pkgs; }; - + buildTools = import ./build-tools.nix { inherit (pkgs) stdenv fetchurl unzip zlib file; stdenv_32bit = pkgs_i686.stdenv; @@ -12,11 +14,11 @@ rec { ncurses_32bit = pkgs_i686.ncurses5; ncurses = pkgs.ncurses5; }; - + support = import ./support.nix { inherit (pkgs) stdenv fetchurl unzip; }; - + supportRepository = import ./support-repository.nix { inherit (pkgs) stdenv fetchurl unzip; }; @@ -47,18 +49,18 @@ rec { inherit (pkgs) stdenv fetchurl unzip makeWrapper; inherit (pkgs) zlib glxinfo freetype fontconfig glib gtk2 atk mesa file alsaLib jdk coreutils libpulseaudio dbus; inherit (pkgs.xorg) libX11 libXext libXrender libxcb libXau libXdmcp libXtst xkeyboardconfig; - + inherit platformTools buildTools support supportRepository platforms sysimages addons sources includeSources; - + stdenv_32bit = pkgs_i686.stdenv; }; - + androidsdk_2_1 = androidsdk { platformVersions = [ "7" ]; abiVersions = [ "armeabi-v7a" ]; useGoogleAPIs = true; }; - + androidsdk_2_2 = androidsdk { platformVersions = [ "8" ]; abiVersions = [ "armeabi-v7a" ]; @@ -70,49 +72,49 @@ rec { abiVersions = [ "armeabi-v7a" ]; useGoogleAPIs = true; }; - + androidsdk_3_0 = androidsdk { platformVersions = [ "11" ]; abiVersions = [ "armeabi-v7a" ]; useGoogleAPIs = true; }; - + androidsdk_3_1 = androidsdk { platformVersions = [ "12" ]; abiVersions = [ "armeabi-v7a" ]; useGoogleAPIs = true; }; - + androidsdk_3_2 = androidsdk { platformVersions = [ "13" ]; abiVersions = [ "armeabi-v7a" ]; useGoogleAPIs = true; }; - + androidsdk_4_0 = androidsdk { platformVersions = [ "14" ]; abiVersions = [ "armeabi-v7a" ]; useGoogleAPIs = true; }; - + androidsdk_4_0_3 = androidsdk { platformVersions = [ "15" ]; abiVersions = [ "armeabi-v7a" ]; useGoogleAPIs = true; }; - + androidsdk_4_1 = androidsdk { platformVersions = [ "16" ]; abiVersions = [ "armeabi-v7a" ]; useGoogleAPIs = true; }; - + androidsdk_4_2 = androidsdk { platformVersions = [ "17" ]; abiVersions = [ "armeabi-v7a" ]; useGoogleAPIs = true; }; - + androidsdk_4_3 = androidsdk { platformVersions = [ "18" ]; abiVersions = [ "armeabi-v7a" "x86" ]; @@ -152,7 +154,7 @@ rec { useExtraSupportLibs = true; useGooglePlayServices = true; }; - + androidsdk_6_0 = androidsdk { platformVersions = [ "23" ]; abiVersions = [ "armeabi-v7a" "x86" "x86_64"]; @@ -214,24 +216,45 @@ rec { }; androidndk = import ./androidndk.nix { - inherit (pkgs) stdenv fetchurl zlib ncurses p7zip lib makeWrapper; - inherit (pkgs) coreutils file findutils gawk gnugrep gnused jdk which; + inherit (buildPackages) + p7zip makeWrapper; + inherit (pkgs) + stdenv fetchurl zlib ncurses lib + coreutils file findutils gawk gnugrep gnused jdk which; inherit platformTools; }; androidndk_r8e = import ./androidndk_r8e.nix { - inherit (pkgs) stdenv fetchurl zlib ncurses lib makeWrapper; - inherit (pkgs) coreutils file findutils gawk gnugrep gnused jdk which; + inherit (buildPackages) + makeWrapper; + inherit (pkgs) + stdenv fetchurl zlib ncurses lib + coreutils file findutils gawk gnugrep gnused jdk which; inherit platformTools; }; - + buildApp = import ./build-app.nix { inherit (pkgs) stdenv jdk ant gnumake gawk file which; inherit androidsdk androidndk; }; - + emulateApp = import ./emulate-app.nix { inherit (pkgs) stdenv; inherit androidsdk; }; + + androidndkPkgs = import ./androidndk-pkgs.nix { + inherit (buildPackages) + makeWrapper; + inherit (pkgs) + lib hostPlatform targetPlatform + runCommand wrapBintoolsWith wrapCCWith; + # buildPackages.foo rather than buildPackages.buildPackages.foo would work, + # but for splicing messing up on infinite recursion for the variants we + # *dont't* use. Using this workaround, but also making a test to ensure + # these two really are the same. + buildAndroidndk = buildPackages.buildPackages.androidenv.androidndk; + inherit androidndk; + targetAndroidndkPkgs = targetPackages.androidenv.androidndkPkgs; + }; } diff --git a/pkgs/development/mobile/androidenv/platform-tools.nix b/pkgs/development/mobile/androidenv/platform-tools.nix index fe75655c02bd..f5e579942846 100644 --- a/pkgs/development/mobile/androidenv/platform-tools.nix +++ b/pkgs/development/mobile/androidenv/platform-tools.nix @@ -1,4 +1,9 @@ -{stdenv, zlib, fetchurl, unzip}: +{ buildPackages, pkgs }: + +let + inherit (buildPackages) fetchurl unzip; + inherit (pkgs) stdenv zlib; +in stdenv.mkDerivation rec { version = "26.0.2"; @@ -42,5 +47,5 @@ stdenv.mkDerivation rec { done ''; - buildInputs = [ unzip ]; + nativeBuildInputs = [ unzip ]; } diff --git a/pkgs/development/mobile/imgpatchtools/default.nix b/pkgs/development/mobile/imgpatchtools/default.nix new file mode 100644 index 000000000000..9cee1c9e5dee --- /dev/null +++ b/pkgs/development/mobile/imgpatchtools/default.nix @@ -0,0 +1,30 @@ +{ stdenv, fetchzip, bzip2, openssl, zlib }: + +stdenv.mkDerivation rec { + name = "imgpatchtools-${version}"; + version = "0.3"; + + src = fetchzip { + url = "https://github.com/erfanoabdi/imgpatchtools/archive/${version}.tar.gz"; + sha256 = "1cwp1hfhip252dz0mbkhrsrkws6m15k359n4amw2vfnglnls8czd"; + }; + + buildInputs = [ bzip2 openssl zlib ]; + + installPhase = "install -Dt $out/bin bin/*"; + + meta = with stdenv.lib; { + description = "Tools to manipulate Android OTA archives"; + longDescription = '' + This package is useful for Android development. In particular, it can be + used to extract ext4 /system image from Android distribution ZIP archives + such as those distributed by LineageOS and Replicant, via BlockImageUpdate + utility. It also includes other, related, but arguably more advanced tools + for OTA manipulation. + ''; + homepage = https://github.com/erfanoabdi/imgpatchtools; + license = licenses.gpl3; + maintainers = with maintainers; [ yegortimoshenko ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/development/node-packages/composition-v4.nix b/pkgs/development/node-packages/composition-v4.nix deleted file mode 100644 index e5892ee616d6..000000000000 --- a/pkgs/development/node-packages/composition-v4.nix +++ /dev/null @@ -1,16 +0,0 @@ -# This file has been generated by node2nix 1.5.1. Do not edit! - -{pkgs ? import { - inherit system; - }, system ? builtins.currentSystem, nodejs ? pkgs."nodejs-4_x"}: - -let - nodeEnv = import ./node-env.nix { - inherit (pkgs) stdenv python2 utillinux runCommand writeTextFile; - inherit nodejs; - }; -in -import ./node-packages-v4.nix { - inherit (pkgs) fetchurl fetchgit; - inherit nodeEnv; -} \ No newline at end of file diff --git a/pkgs/development/node-packages/composition-v6.nix b/pkgs/development/node-packages/composition-v6.nix index 4232324f3502..fa4d7268f01e 100644 --- a/pkgs/development/node-packages/composition-v6.nix +++ b/pkgs/development/node-packages/composition-v6.nix @@ -1,4 +1,4 @@ -# This file has been generated by node2nix 1.5.1. Do not edit! +# This file has been generated by node2nix 1.5.2. Do not edit! {pkgs ? import { inherit system; diff --git a/pkgs/development/node-packages/composition-v8.nix b/pkgs/development/node-packages/composition-v8.nix index cb8e6ee8adfe..a83df852ce29 100644 --- a/pkgs/development/node-packages/composition-v8.nix +++ b/pkgs/development/node-packages/composition-v8.nix @@ -1,4 +1,4 @@ -# This file has been generated by node2nix 1.5.1. Do not edit! +# This file has been generated by node2nix 1.5.2. Do not edit! {pkgs ? import { inherit system; diff --git a/pkgs/development/node-packages/default-v4.nix b/pkgs/development/node-packages/default-v4.nix deleted file mode 100644 index 7546b2e34ce9..000000000000 --- a/pkgs/development/node-packages/default-v4.nix +++ /dev/null @@ -1,12 +0,0 @@ -{pkgs, system, nodejs, stdenv}: - -let - nodePackages = import ./composition-v4.nix { - inherit pkgs system nodejs; - }; -in -nodePackages // { - node-inspector = nodePackages.node-inspector.override (oldAttrs: { - buildInputs = oldAttrs.buildInputs ++ [ nodePackages.node-pre-gyp ]; - }); -} diff --git a/pkgs/development/node-packages/generate.sh b/pkgs/development/node-packages/generate.sh index 5ce63dd882fe..c3aa741ef806 100755 --- a/pkgs/development/node-packages/generate.sh +++ b/pkgs/development/node-packages/generate.sh @@ -2,6 +2,5 @@ #! nix-shell -i bash -p nodePackages.node2nix rm -f node-env.nix -node2nix -i node-packages-v4.json -o node-packages-v4.nix -c composition-v4.nix node2nix -6 -i node-packages-v6.json -o node-packages-v6.nix -c composition-v6.nix node2nix -8 -i node-packages-v8.json -o node-packages-v8.nix -c composition-v8.nix diff --git a/pkgs/development/node-packages/node-packages-v4.json b/pkgs/development/node-packages/node-packages-v4.json deleted file mode 100644 index b1349773a73d..000000000000 --- a/pkgs/development/node-packages/node-packages-v4.json +++ /dev/null @@ -1,9 +0,0 @@ -[ - "coffee-script" -, "grunt-cli" -, "gulp" -, "node-gyp" -, "node-inspector" -, "node-pre-gyp" -, "npm" -] diff --git a/pkgs/development/node-packages/node-packages-v4.nix b/pkgs/development/node-packages/node-packages-v4.nix deleted file mode 100644 index 9db719716472..000000000000 --- a/pkgs/development/node-packages/node-packages-v4.nix +++ /dev/null @@ -1,6292 +0,0 @@ -# This file has been generated by node2nix 1.5.1. Do not edit! - -{nodeEnv, fetchurl, fetchgit, globalBuildInputs ? []}: - -let - sources = { - "abbrev-1.1.1" = { - name = "abbrev"; - packageName = "abbrev"; - version = "1.1.1"; - src = fetchurl { - url = "https://registry.npmjs.org/abbrev/-/abbrev-1.1.1.tgz"; - sha512 = "38s4f3id97wsb0rg9nm9zvxyq0nvwrmrpa5dzvrkp36mf5ibs98b4z6lvsbrwzzs0sbcank6c7gpp06vcwp9acfhp41rzlhi3ybsxwy"; - }; - }; - "accepts-1.3.4" = { - name = "accepts"; - packageName = "accepts"; - version = "1.3.4"; - src = fetchurl { - url = "https://registry.npmjs.org/accepts/-/accepts-1.3.4.tgz"; - sha1 = "86246758c7dd6d21a6474ff084a4740ec05eb21f"; - }; - }; - "after-0.8.2" = { - name = "after"; - packageName = "after"; - version = "0.8.2"; - src = fetchurl { - url = "https://registry.npmjs.org/after/-/after-0.8.2.tgz"; - sha1 = "fedb394f9f0e02aa9768e702bda23b505fae7e1f"; - }; - }; - "ajv-4.11.8" = { - name = "ajv"; - packageName = "ajv"; - version = "4.11.8"; - src = fetchurl { - url = "https://registry.npmjs.org/ajv/-/ajv-4.11.8.tgz"; - sha1 = "82ffb02b29e662ae53bdc20af15947706739c536"; - }; - }; - "ajv-5.5.2" = { - name = "ajv"; - packageName = "ajv"; - version = "5.5.2"; - src = fetchurl { - url = "https://registry.npmjs.org/ajv/-/ajv-5.5.2.tgz"; - sha1 = "73b5eeca3fab653e3d3f9422b341ad42205dc965"; - }; - }; - "ansi-gray-0.1.1" = { - name = "ansi-gray"; - packageName = "ansi-gray"; - version = "0.1.1"; - src = fetchurl { - url = "https://registry.npmjs.org/ansi-gray/-/ansi-gray-0.1.1.tgz"; - sha1 = "2962cf54ec9792c48510a3deb524436861ef7251"; - }; - }; - "ansi-regex-2.1.1" = { - name = "ansi-regex"; - packageName = "ansi-regex"; - version = "2.1.1"; - src = fetchurl { - url = "https://registry.npmjs.org/ansi-regex/-/ansi-regex-2.1.1.tgz"; - sha1 = "c3b33ab5ee360d86e0e628f0468ae7ef27d654df"; - }; - }; - "ansi-styles-2.2.1" = { - name = "ansi-styles"; - packageName = "ansi-styles"; - version = "2.2.1"; - src = fetchurl { - url = "https://registry.npmjs.org/ansi-styles/-/ansi-styles-2.2.1.tgz"; - sha1 = "b432dd3358b634cf75e1e4664368240533c1ddbe"; - }; - }; - "ansi-wrap-0.1.0" = { - name = "ansi-wrap"; - packageName = "ansi-wrap"; - version = "0.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/ansi-wrap/-/ansi-wrap-0.1.0.tgz"; - sha1 = "a82250ddb0015e9a27ca82e82ea603bbfa45efaf"; - }; - }; - "aproba-1.2.0" = { - name = "aproba"; - packageName = "aproba"; - version = "1.2.0"; - src = fetchurl { - url = "https://registry.npmjs.org/aproba/-/aproba-1.2.0.tgz"; - sha512 = "13mgnbmdhdq0qncijvpip1l39q1a8labcvj3hc3n1yl2zch106mdkn7p7bd5knvmfkkn1js9nd47nzyjk1himbm8ry8i8gd6mk7mlk3"; - }; - }; - "archy-1.0.0" = { - name = "archy"; - packageName = "archy"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/archy/-/archy-1.0.0.tgz"; - sha1 = "f9c8c13757cc1dd7bc379ac77b2c62a5c2868c40"; - }; - }; - "are-we-there-yet-1.1.4" = { - name = "are-we-there-yet"; - packageName = "are-we-there-yet"; - version = "1.1.4"; - src = fetchurl { - url = "https://registry.npmjs.org/are-we-there-yet/-/are-we-there-yet-1.1.4.tgz"; - sha1 = "bb5dca382bb94f05e15194373d16fd3ba1ca110d"; 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- }) - ]; - }) - (sources."strip-ansi-3.0.1" // { - dependencies = [ - sources."ansi-regex-2.1.1" - ]; - }) - sources."wide-align-1.1.2" - ]; - }) - sources."set-blocking-2.0.0" - ]; - }) - (sources."rc-1.2.4" // { - dependencies = [ - sources."deep-extend-0.4.2" - sources."ini-1.3.5" - sources."minimist-1.2.0" - sources."strip-json-comments-2.0.1" - ]; - }) - (sources."request-2.81.0" // { - dependencies = [ - sources."aws-sign2-0.6.0" - sources."aws4-1.6.0" - sources."caseless-0.12.0" - (sources."combined-stream-1.0.5" // { - dependencies = [ - sources."delayed-stream-1.0.0" - ]; - }) - sources."extend-3.0.1" - sources."forever-agent-0.6.1" - (sources."form-data-2.1.4" // { - dependencies = [ - sources."asynckit-0.4.0" - ]; - }) - (sources."har-validator-4.2.1" // { - dependencies = [ - (sources."ajv-4.11.8" // { - dependencies = [ - sources."co-4.6.0" - (sources."json-stable-stringify-1.0.1" // { - dependencies = [ - sources."jsonify-0.0.0" - ]; - }) - ]; - }) - sources."har-schema-1.0.5" - ]; - }) - (sources."http-signature-1.1.1" // { - dependencies = [ - sources."assert-plus-0.2.0" - (sources."jsprim-1.4.1" // { - dependencies = [ - sources."assert-plus-1.0.0" - sources."extsprintf-1.3.0" - sources."json-schema-0.2.3" - (sources."verror-1.10.0" // { - dependencies = [ - sources."core-util-is-1.0.2" - ]; - }) - ]; - }) - (sources."sshpk-1.13.1" // { - dependencies = [ - sources."asn1-0.2.3" - sources."assert-plus-1.0.0" - sources."bcrypt-pbkdf-1.0.1" - sources."dashdash-1.14.1" - sources."ecc-jsbn-0.1.1" - sources."getpass-0.1.7" - sources."jsbn-0.1.1" - sources."tweetnacl-0.14.5" - ]; - }) - ]; - }) - sources."is-typedarray-1.0.0" - sources."isstream-0.1.2" - sources."json-stringify-safe-5.0.1" - (sources."mime-types-2.1.17" // { - dependencies = [ - sources."mime-db-1.30.0" - ]; - }) - sources."oauth-sign-0.8.2" - sources."performance-now-0.2.0" - sources."qs-6.4.0" - sources."safe-buffer-5.1.1" - sources."stringstream-0.0.5" - (sources."tough-cookie-2.3.3" // { - dependencies = [ - sources."punycode-1.4.1" - ]; 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- }; - production = true; - bypassCache = false; - }; - npm = nodeEnv.buildNodePackage { - name = "npm"; - packageName = "npm"; - version = "5.6.0"; - src = fetchurl { - url = "https://registry.npmjs.org/npm/-/npm-5.6.0.tgz"; - sha512 = "0nnr796ik5h8bsd3k9ygivivr3na2ksnf5iipf8dsnn20j10i9sgmhmsnzbimd2pqgjbrpp8gbpl2q7j5c7yjqjfirrh8xcc3v3gpws"; - }; - buildInputs = globalBuildInputs; - meta = { - description = "a package manager for JavaScript"; - homepage = https://docs.npmjs.com/; - license = "Artistic-2.0"; - }; - production = true; - bypassCache = false; - }; -} \ No newline at end of file diff --git a/pkgs/development/node-packages/node-packages-v6.nix b/pkgs/development/node-packages/node-packages-v6.nix index 90f5fd309d00..ebea0df1362d 100644 --- a/pkgs/development/node-packages/node-packages-v6.nix +++ b/pkgs/development/node-packages/node-packages-v6.nix @@ -1,4 +1,4 @@ -# This file has been generated by node2nix 1.5.1. Do not edit! +# This file has been generated by node2nix 1.5.2. Do not edit! {nodeEnv, fetchurl, fetchgit, globalBuildInputs ? []}: @@ -49,6 +49,33 @@ let sha512 = "2ilygr40l2yqbk6lix4xnnnqsq6fxa6sysdxg49bg1ax5gzhwy3bcjbdlk7lndgh9055slpx6fybs3p8mhvbsnnjkmkqzrfy8l5mn1q"; }; }; + "@types/babel-types-7.0.1" = { + name = "_at_types_slash_babel-types"; + packageName = "@types/babel-types"; + version = "7.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/@types/babel-types/-/babel-types-7.0.1.tgz"; + sha512 = "3bsk1lhqbj6zdrzkmzf9yjr2v77nlaqq1rzsjq8n56k8n0fl3fyxpcanxm3h5yqm6zzfi8qdmdxf5hrvrmg3kwbdspii3kb9y9hwiqj"; + }; + }; + "@types/babylon-6.16.2" = { + name = "_at_types_slash_babylon"; + packageName = "@types/babylon"; + version = "6.16.2"; + src = fetchurl { + url = "https://registry.npmjs.org/@types/babylon/-/babylon-6.16.2.tgz"; + sha512 = "3nps6llkag9z58iv9mkg13c2b35ba57z1dmis7900x1dkd09svfn0haxwcgsp4v9xmnqb95v40h3ki4w3xnv68cajsnfscgm7ip56zq"; + }; + }; + "@types/caseless-0.12.1" = { + name = "_at_types_slash_caseless"; + packageName = "@types/caseless"; + version = "0.12.1"; + src = fetchurl { + url = "https://registry.npmjs.org/@types/caseless/-/caseless-0.12.1.tgz"; + sha512 = "3ygc8335my77k11wjf0wihzqfsv4fxyfrvb730sx8ab3phx3wc8g4pg3g84h497ipvzk7i9gnwnzrkg68zm6df6wi59y7hdgrmlq68n"; + }; + }; "@types/form-data-2.2.1" = { name = "_at_types_slash_form-data"; packageName = "@types/form-data"; @@ -58,31 +85,31 @@ let sha512 = "2fv2qaz90rp6ib2s45ix0p3a4bd6yl6k94k1kkhw7w4s2aa5mqc6chppkf6pfvsz1l6phh7y0xswyfyzjgny7qzascch8c7ws20a0r4"; }; }; - "@types/node-8.5.9" = { + "@types/node-8.9.4" = { name = "_at_types_slash_node"; packageName = "@types/node"; - version = "8.5.9"; + version = "8.9.4"; src = fetchurl { - url = "https://registry.npmjs.org/@types/node/-/node-8.5.9.tgz"; - sha512 = "2j38fqqziiv6m51w16lz6lgivrkycvn4nwch7sdpg32hbl5kv5m2ngg4y4jrf0v1s7iryi5gyh9729b8l1p48cf9hf0gj567h13grxk"; + url = "https://registry.npmjs.org/@types/node/-/node-8.9.4.tgz"; + sha512 = "0fc7dnkm8mxih1kx7dpxdjp9432wwn2hj9k3rs6ipmyac7x4d73kjxhkinlv9wzmzpxkz8n0cp6zykl8nvb4ksh3gycwhm7mbgw6avm"; }; }; - "@types/node-9.3.0" = { + "@types/node-9.4.6" = { name = "_at_types_slash_node"; packageName = "@types/node"; - version = "9.3.0"; + version = "9.4.6"; src = fetchurl { - url = "https://registry.npmjs.org/@types/node/-/node-9.3.0.tgz"; - sha512 = "0mhmzddyv8rhkha7ibpbsa5dfygzaa90438aqzpg9w7d31n093a7spx2zg4zfki4qrab71xrfb381hmqajn826cnrw9kc7kv2y5zl60"; + url = "https://registry.npmjs.org/@types/node/-/node-9.4.6.tgz"; + sha512 = "08j600qycq8wmra6zn9jvh2ifnkr90s08rcv3spjqc03mjapfm4bz009cm6xfqd7ipbsm7q6ymxccdnlw4gbyd3lyh21a4npqnjsd89"; }; }; - "@types/request-2.0.13" = { + "@types/request-2.47.0" = { name = "_at_types_slash_request"; packageName = "@types/request"; - version = "2.0.13"; + version = "2.47.0"; src = fetchurl { - url = "https://registry.npmjs.org/@types/request/-/request-2.0.13.tgz"; - sha512 = "3gbwnwgvm7d4jwixg004j635l89kvd2vll1wkv0rdlz5v8biqwnmgfg67nbj3lccvn4rhbalwpkrgvqz66j0n3d20fs02xyxr0z8x80"; + url = "https://registry.npmjs.org/@types/request/-/request-2.47.0.tgz"; + sha512 = "3jk7nawc1yb26ykdlv3mk1bmdpq2an6krskfj4x46kc9ka9r11ixrivg5zwcm451wlarry8dk36mick3d68w0c85i177ymghzkcr9gw"; }; }; "@types/tough-cookie-2.3.2" = { @@ -103,13 +130,13 @@ let sha512 = "1psrs8sjpmhz8sz2zjkkd7743vzdi7q7vcj8p219q1pkfawr619rl1m5pczp69hbm1769kn8zwlbayjylhl7an5hkvkdd2bi04lpx75"; }; }; - "@zeit/check-updates-1.0.5" = { + "@zeit/check-updates-1.1.0" = { name = "_at_zeit_slash_check-updates"; packageName = "@zeit/check-updates"; - version = "1.0.5"; + version = "1.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/@zeit/check-updates/-/check-updates-1.0.5.tgz"; - sha512 = "3a4h5bdrpjkv8rjvyafqf9b3wnyynzi3gisz92k37c35nvawlicsdv4svwnsxfqvhjhqn3lab6rjmkkivvdijr41vm3r048pp5dm1s0"; + url = "https://registry.npmjs.org/@zeit/check-updates/-/check-updates-1.1.0.tgz"; + sha512 = "0pg9y2fssdvfwq19ih2w4fwma8qw3anxlsbqrzncywxl30j65k2bwwlp2djz5brkz27xixcrx9g9gx9blszhbaz0pv5xmghrw33700y"; }; }; "CSSselect-0.4.1" = { @@ -274,13 +301,13 @@ let sha1 = "105495ae5361d697bd195c825192e1ad7f253787"; }; }; - "acorn-5.3.0" = { + "acorn-5.5.0" = { name = "acorn"; packageName = "acorn"; - version = "5.3.0"; + version = "5.5.0"; src = fetchurl { - url = "https://registry.npmjs.org/acorn/-/acorn-5.3.0.tgz"; - sha512 = "197zp88clmmxjyvhahqv32kv07q825hf87facxaq8qmvb1swfqnpyy4398dl56sr2fa44f7gjpzzlwy1szqzwww6746y3kmwb6gxs31"; + url = "https://registry.npmjs.org/acorn/-/acorn-5.5.0.tgz"; + sha512 = "3zaj6p3hwrmg5i65dg7q0kk9224w6fd404k830k922wn3mn4x95c48zrmgg4n85xigg904syrzbh5nca94aaf4anfjpjm9vbpfgkfba"; }; }; "acorn-dynamic-import-2.0.2" = { @@ -292,6 +319,15 @@ let sha1 = "c752bd210bef679501b6c6cb7fc84f8f47158cc4"; }; }; + "acorn-dynamic-import-3.0.0" = { + name = "acorn-dynamic-import"; + packageName = "acorn-dynamic-import"; + version = "3.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/acorn-dynamic-import/-/acorn-dynamic-import-3.0.0.tgz"; + sha512 = "1d15axgran5kql29v8hk39yifs5zcg7rkffakv4nd3k49jpbzxh030nbsh9q31gnw8n3rfmwpmsq7rq9k9sk2p2l14wk2i5kzqramfd"; + }; + }; "acorn-globals-1.0.9" = { name = "acorn-globals"; packageName = "acorn-globals"; @@ -319,6 +355,15 @@ let sha1 = "afdf9488fb1ecefc8348f6fb22f464e32a58b36b"; }; }; + "acorn-node-1.3.0" = { + name = "acorn-node"; + packageName = "acorn-node"; + version = "1.3.0"; + src = fetchurl { + url = "https://registry.npmjs.org/acorn-node/-/acorn-node-1.3.0.tgz"; + sha512 = "0pxd0cjsh0kdh8nxcpm000fcsgwmr8b13gyxkac8yxzz9a5wblqka5crksicnx8mqwy499k1jryr83bjzb3355xikgs5mfxgpigkwvr"; + }; + }; "active-x-obfuscator-0.0.1" = { name = "active-x-obfuscator"; packageName = "active-x-obfuscator"; @@ -382,22 +427,22 @@ let sha1 = "6a7990437ca736d5e1288db92bd3266d5f5cb2aa"; }; }; - "addons-linter-0.33.0" = { + "addons-linter-0.35.0" = { name = "addons-linter"; packageName = "addons-linter"; - version = "0.33.0"; + version = "0.35.0"; src = fetchurl { - url = "https://registry.npmjs.org/addons-linter/-/addons-linter-0.33.0.tgz"; - sha1 = "0b2a75a6650e743fe22a34ec7cfd4647fd062efc"; + url = "https://registry.npmjs.org/addons-linter/-/addons-linter-0.35.0.tgz"; + sha1 = "85872cce58983ff339ced297dbff486c02ecd336"; }; }; - "addr-to-ip-port-1.4.2" = { + "addr-to-ip-port-1.4.3" = { name = "addr-to-ip-port"; packageName = "addr-to-ip-port"; - version = "1.4.2"; + version = "1.4.3"; src = fetchurl { - url = "https://registry.npmjs.org/addr-to-ip-port/-/addr-to-ip-port-1.4.2.tgz"; - sha1 = "7e46ff1f26b7a9f5e33fd839d57aef6303b4c692"; + url = "https://registry.npmjs.org/addr-to-ip-port/-/addr-to-ip-port-1.4.3.tgz"; + sha512 = "0cjsq4lq001pd9nr0j7lc41vxyrf0x9qpaq8d8989n1grjzzbv8vjdq9l607ab8pgfh1qkx0vhgva4wsnfndkb2c955f04jq8dx78gq"; }; }; "address-1.0.3" = { @@ -535,6 +580,15 @@ let sha1 = "73b5eeca3fab653e3d3f9422b341ad42205dc965"; }; }; + "ajv-6.2.0" = { + name = "ajv"; + packageName = "ajv"; + version = "6.2.0"; + src = fetchurl { + url = "https://registry.npmjs.org/ajv/-/ajv-6.2.0.tgz"; + sha1 = "afac295bbaa0152449e522742e4547c1ae9328d2"; + }; + }; "ajv-keywords-1.5.1" = { name = "ajv-keywords"; packageName = "ajv-keywords"; @@ -553,6 +607,24 @@ let sha1 = "617997fc5f60576894c435f940d819e135b80762"; }; }; + "ajv-keywords-3.1.0" = { + name = "ajv-keywords"; + packageName = "ajv-keywords"; + version = "3.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/ajv-keywords/-/ajv-keywords-3.1.0.tgz"; + sha1 = "ac2b27939c543e95d2c06e7f7f5c27be4aa543be"; + }; + }; + "ajv-merge-patch-3.0.0" = { + name = "ajv-merge-patch"; + packageName = "ajv-merge-patch"; + version = "3.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/ajv-merge-patch/-/ajv-merge-patch-3.0.0.tgz"; + sha1 = "76f071e391f419fe9fe3fea7e920a1ad824b2b61"; + }; + }; "aliasify-2.1.0" = { name = "aliasify"; packageName = "aliasify"; @@ -922,6 +994,15 @@ let sha1 = "cfd01e0fbba3d6caed049fbd758d40f65196f57c"; }; }; + "argparse-1.0.10" = { + name = "argparse"; + packageName = "argparse"; + version = "1.0.10"; + src = fetchurl { + url = "https://registry.npmjs.org/argparse/-/argparse-1.0.10.tgz"; + sha512 = "17fhywmdjcp8g0ys089i5xg26yajkkg9zg8hyry3fghz75b2pq5vdx997dk5p2sc15r9nsj8rmf4f27g81hi92kzj5q86sdmg5ni553"; + }; + }; "argparse-1.0.4" = { name = "argparse"; packageName = "argparse"; @@ -931,15 +1012,6 @@ let sha1 = "2b12247b933001971addcbfe4e67d20fd395bbf4"; }; }; - "argparse-1.0.9" = { - name = "argparse"; - packageName = "argparse"; - version = "1.0.9"; - src = fetchurl { - url = "https://registry.npmjs.org/argparse/-/argparse-1.0.9.tgz"; - sha1 = "73d83bc263f86e97f8cc4f6bae1b0e90a7d22c86"; - }; - }; "args-3.0.8" = { name = "args"; packageName = "args"; @@ -1246,13 +1318,13 @@ let sha1 = "dac8787713c9966849fc8180777ebe9c1ddf3b86"; }; }; - "asn1.js-4.9.2" = { + "asn1.js-4.10.1" = { name = "asn1.js"; packageName = "asn1.js"; - version = "4.9.2"; + version = "4.10.1"; src = fetchurl { - url = "https://registry.npmjs.org/asn1.js/-/asn1.js-4.9.2.tgz"; - sha512 = "071d32h5646ddyfxvmm0yd0xc320zh2cdsjal4hs8cs0hgn9dpq7k9c9ndlhjq3y93nlawkinm99znqvp0cxx61ic7qy4nn7d5arwvg"; + url = "https://registry.npmjs.org/asn1.js/-/asn1.js-4.10.1.tgz"; + sha512 = "15j9ms7k6dx08m1wqrvc4958vcrshjjpicpxmz9bflsyk0x2r7w20lxlm27jpyj7cwj6158a0582vifk393hqp0ysn9mlbabqw9qzd7"; }; }; "assert-1.4.1" = { @@ -1318,13 +1390,13 @@ let sha1 = "59667f41fadd4f20ccbc2bb96b8d4f7f78ec0367"; }; }; - "ast-types-0.10.1" = { + "ast-types-0.11.2" = { name = "ast-types"; packageName = "ast-types"; - version = "0.10.1"; + version = "0.11.2"; src = fetchurl { - url = "https://registry.npmjs.org/ast-types/-/ast-types-0.10.1.tgz"; - sha512 = "2wjsah372x6rjrrsq3bv915lccq4pjpyk4b0vb7kmc87ab5yjgac4rab0qclh6brhhyv95mbyy1k5sijfyx36676darz57k6gsgx3ji"; + url = "https://registry.npmjs.org/ast-types/-/ast-types-0.11.2.tgz"; + sha512 = "1mfcrhzn37ray5i3fizrfm5gr1zijv6k1gy370v62smzd6j8d3irphhma9cs9kij7nwkgh5v60q53bfivpm2sscfxbdms9ywiqakgv8"; }; }; "ast-types-0.9.6" = { @@ -1525,13 +1597,13 @@ let sha1 = "00f35b2d27ac91b1f0d3ef2084c98cf1d1f0adc3"; }; }; - "aws-sdk-2.187.0" = { + "aws-sdk-2.203.0" = { name = "aws-sdk"; packageName = "aws-sdk"; - version = "2.187.0"; + version = "2.203.0"; src = fetchurl { - url = "https://registry.npmjs.org/aws-sdk/-/aws-sdk-2.187.0.tgz"; - sha1 = "04cb9a333d39c09753bf3ff63ec065b32b00db18"; + url = "https://registry.npmjs.org/aws-sdk/-/aws-sdk-2.203.0.tgz"; + sha1 = "7573c1274a4350bd5d78a6db93c9eeab40940acb"; }; }; "aws-sign-0.2.0" = { @@ -1957,13 +2029,13 @@ let sha1 = "af32f78b31a6fcef119c87b0fd8d9753f03a0bb8"; }; }; - "babel-generator-6.26.0" = { + "babel-generator-6.26.1" = { name = "babel-generator"; packageName = "babel-generator"; - version = "6.26.0"; + version = "6.26.1"; src = fetchurl { - url = "https://registry.npmjs.org/babel-generator/-/babel-generator-6.26.0.tgz"; - sha1 = "ac1ae20070b79f6e3ca1d3269613053774f20dc5"; + url = "https://registry.npmjs.org/babel-generator/-/babel-generator-6.26.1.tgz"; + sha512 = "2jfjq7ggb0ygyzxg3vw248iq0iw2v00janjva1bf3l322k4zjcx9hvq9qqy67gxxyl2igw1asxfgp769hd5229pc70kwri9l1iz09qz"; }; }; "babel-helper-builder-react-jsx-6.26.0" = { @@ -2236,13 +2308,13 @@ let sha1 = "a39992d723584811982be5e290bb6a53d86700f1"; }; }; - "base64-js-1.2.1" = { + "base64-js-1.2.3" = { name = "base64-js"; packageName = "base64-js"; - version = "1.2.1"; + version = "1.2.3"; src = fetchurl { - url = "https://registry.npmjs.org/base64-js/-/base64-js-1.2.1.tgz"; - sha512 = "0dhi66vsajfcm04s11xqklh5lj3abs4ncnl8h3689964aqam3ps9spmc454hz94rz3x1x5l1ad03jrba67mq9zc9vq9a1gchma581bp"; + url = "https://registry.npmjs.org/base64-js/-/base64-js-1.2.3.tgz"; + sha512 = "3kqp8hzql2ccdqf7vqizav1lrwp5gynn081718g9slxcs428sv02n037xb9hfgrqybbk4qacnk5mcv63z8fm3l4h6fi06xm8nqj3h1j"; }; }; "base64-url-1.2.1" = { @@ -2650,13 +2722,13 @@ let sha1 = "bcf13052ca54463f30f9fc7e95b9a47630a94921"; }; }; - "blob-to-buffer-1.2.6" = { + "blob-to-buffer-1.2.7" = { name = "blob-to-buffer"; packageName = "blob-to-buffer"; - version = "1.2.6"; + version = "1.2.7"; src = fetchurl { - url = "https://registry.npmjs.org/blob-to-buffer/-/blob-to-buffer-1.2.6.tgz"; - sha1 = "089ac264c686b73ead6c539a484a8003bfbb2033"; + url = "https://registry.npmjs.org/blob-to-buffer/-/blob-to-buffer-1.2.7.tgz"; + sha512 = "3vjm0x8c1iv48p266p8s61kwfyvi089npgmwb8zf69yyqrwfixxis0rsgsfrzizl22wzmf0azbxsxqb132nx2q8fjjcgqf7bi2kl593"; }; }; "block-stream-0.0.9" = { @@ -2758,15 +2830,6 @@ let sha1 = "c08cf330c3358e151016a05746f13f029c97fa97"; }; }; - "body-parser-1.17.2" = { - name = "body-parser"; - packageName = "body-parser"; - version = "1.17.2"; - src = fetchurl { - url = "https://registry.npmjs.org/body-parser/-/body-parser-1.17.2.tgz"; - sha1 = "f8892abc8f9e627d42aedafbca66bf5ab99104ee"; - }; - }; "body-parser-1.18.2" = { name = "body-parser"; packageName = "body-parser"; @@ -2938,13 +3001,13 @@ let sha1 = "d60d5dcc20cba6dc7e1f299b35d3e1f95dafbae6"; }; }; - "brace-expansion-1.1.8" = { + "brace-expansion-1.1.11" = { name = "brace-expansion"; packageName = "brace-expansion"; - version = "1.1.8"; + version = "1.1.11"; src = fetchurl { - url = "https://registry.npmjs.org/brace-expansion/-/brace-expansion-1.1.8.tgz"; - sha1 = "c07b211c7c952ec1f8efd51a77ef0d1d3990a292"; + url = "https://registry.npmjs.org/brace-expansion/-/brace-expansion-1.1.11.tgz"; + sha512 = "248cnpbbf0p32h53rd3g8wzpgrkaj4p078ra1g6l16f82i6bzkvmhwqan5rk88apbll9ly1476kngd7f7z27i3b3zxpbb3064f8yaw8"; }; }; "braces-0.1.5" = { @@ -2965,13 +3028,13 @@ let sha1 = "ba77962e12dff969d6b76711e914b737857bf6a7"; }; }; - "braces-2.3.0" = { + "braces-2.3.1" = { name = "braces"; packageName = "braces"; - version = "2.3.0"; + version = "2.3.1"; src = fetchurl { - url = "https://registry.npmjs.org/braces/-/braces-2.3.0.tgz"; - sha512 = "2ngfivxj9g7knac123y1lk3arpmmzdhfn2g4qf1n4kzpvka4vafp48zcsh2qq7c97fxw2la5q2h6m2xcq5b1cr8b45j66jx0i8vr0rz"; + url = "https://registry.npmjs.org/braces/-/braces-2.3.1.tgz"; + sha512 = "2fpcx8h100fhpaffr6mh5ysp6dv06nl5xkii807fw0c603i15sg3wsxmj63fdn4apxdnn8an2ks883mvrdsv7mfryhfxg1pf1h6bvj8"; }; }; "broadway-0.3.6" = { @@ -3001,13 +3064,13 @@ let sha1 = "51598408a13f4c9c5b20eba44554b2c0b0ae4074"; }; }; - "browser-pack-6.0.3" = { + "browser-pack-6.0.4" = { name = "browser-pack"; packageName = "browser-pack"; - version = "6.0.3"; + version = "6.0.4"; src = fetchurl { - url = "https://registry.npmjs.org/browser-pack/-/browser-pack-6.0.3.tgz"; - sha512 = "3rbr2j80zl8099hjgsqkizp276cg4q60zjkd481fvnj66k8gmm5w0wbvvqdzpsipgaa3xxsypcr3ryjw1sk2vgzr2hw6pzwr5i933r6"; + url = "https://registry.npmjs.org/browser-pack/-/browser-pack-6.0.4.tgz"; + sha512 = "0ylgxzrsxs25v3c4mz5ggqawb8k3xb39ialqlflk1nadfk8wrig2g2ipkpnw6bf9zhdhmigkwqbbl8yssibcb6fgnbbqfgsnfgnz123"; }; }; "browser-resolve-1.11.2" = { @@ -3172,13 +3235,13 @@ let sha1 = "6d1bb601b07a4efced97094132093027c95bc298"; }; }; - "buffer-5.0.8" = { + "buffer-5.1.0" = { name = "buffer"; packageName = "buffer"; - version = "5.0.8"; + version = "5.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/buffer/-/buffer-5.0.8.tgz"; - sha512 = "0capij8lgps5fzc5hikkkdsn58lmzfdpni7v2m0ham5r67q24kln1spwz4dnk3nh6zkiqmgz0cqnq591pms1pkkv8prvksd2m1f6yy5"; + url = "https://registry.npmjs.org/buffer/-/buffer-5.1.0.tgz"; + sha512 = "1ipkzdnq03rnxyl50wmzigdbd96lh0mgzffcab80yxl38x7k316kzs3h0w0bxdjj7vqh6dw3wgb7y3rsqab0ar4ky9rbh0r1f1i2hk2"; }; }; "buffer-alloc-unsafe-1.0.0" = { @@ -3505,6 +3568,15 @@ let sha1 = "3fb410c7e91558eb1ab22a82834577aa6bd61d42"; }; }; + "cacache-10.0.4" = { + name = "cacache"; + packageName = "cacache"; + version = "10.0.4"; + src = fetchurl { + url = "https://registry.npmjs.org/cacache/-/cacache-10.0.4.tgz"; + sha512 = "0f1zwi8bbiia995410m24xljd0ra0vk579q7rk48p7mrq9nbilx3qa2rnp7hjdwnvx28zfad0rfdcwyq3blzkb3rk8b9yl77crp960f"; + }; + }; "cache-base-1.0.1" = { name = "cache-base"; packageName = "cache-base"; @@ -3676,13 +3748,13 @@ let sha1 = "308beeaffdf28119051efa1d932213c91b8f92e7"; }; }; - "camelo-1.1.11" = { - name = "camelo"; - packageName = "camelo"; - version = "1.1.11"; + "camelcase-keys-4.2.0" = { + name = "camelcase-keys"; + packageName = "camelcase-keys"; + version = "4.2.0"; src = fetchurl { - url = "https://registry.npmjs.org/camelo/-/camelo-1.1.11.tgz"; - sha512 = "39qf2hdriyb5zn5bc62wgj59whx06nmzij9yylv0mrjnivgpqg2z3ksxl035nn35lnavi1b20qi062l41xah3b3nnbw42dh6b4qk34i"; + url = "https://registry.npmjs.org/camelcase-keys/-/camelcase-keys-4.2.0.tgz"; + sha1 = "a2aa5fb1af688758259c32c141426d78923b9b77"; }; }; "capture-stack-trace-1.0.0" = { @@ -3838,6 +3910,15 @@ let sha512 = "3fj8njcdcvyplivm2fj19lqw8qv7gb8v7gd6a223pmn8f3di4zwkhyb09vzlmw3pnk4ib88kp4cg8r9i5k5rskalzdfh1l23ljp6gh3"; }; }; + "chalk-2.3.1" = { + name = "chalk"; + packageName = "chalk"; + version = "2.3.1"; + src = fetchurl { + url = "https://registry.npmjs.org/chalk/-/chalk-2.3.1.tgz"; + sha512 = "3m0k6j50aridlrk1q8kf3cd1vcj6qcg2nx5yk8d0196hmw0c4a6y1h315p24l34yz0chfrcrkrsr12cixccfp5q7caw5803z6hkhia1"; + }; + }; "character-entities-1.2.1" = { name = "character-entities"; packageName = "character-entities"; @@ -3964,13 +4045,13 @@ let sha1 = "798e689778151c8076b4b360e5edd28cda2bb468"; }; }; - "chokidar-2.0.0" = { + "chokidar-2.0.2" = { name = "chokidar"; packageName = "chokidar"; - version = "2.0.0"; + version = "2.0.2"; src = fetchurl { - url = "https://registry.npmjs.org/chokidar/-/chokidar-2.0.0.tgz"; - sha512 = "01y5j8xkkzlzc4yzh4f8gbshbs6i3hb4wlz5nd48xcmm3vmawah9jj052km463v3d2vqx9kbrnxvjw2fkcbdxw0sg33ksclzlvc419s"; + url = "https://registry.npmjs.org/chokidar/-/chokidar-2.0.2.tgz"; + sha512 = "1kncf65ax274b43r63m0bfbap3j5ah7dn86niqwpzzw6ilvpc7yy0fan14k584lw8ycf4nl78n5gv3bpyr4jrk5j3v441ragk1qfzcp"; }; }; "chownr-0.0.2" = { @@ -3991,6 +4072,15 @@ let sha1 = "e2a75042a9551908bebd25b8523d5f9769d79181"; }; }; + "chrome-trace-event-0.1.2" = { + name = "chrome-trace-event"; + packageName = "chrome-trace-event"; + version = "0.1.2"; + src = fetchurl { + url = "https://registry.npmjs.org/chrome-trace-event/-/chrome-trace-event-0.1.2.tgz"; + sha1 = "90f36885d5345a50621332f0717b595883d5d982"; + }; + }; "chromecast-player-0.2.3" = { name = "chromecast-player"; packageName = "chromecast-player"; @@ -4252,13 +4342,13 @@ let sha1 = "a211e09c6a3de3ba1af27d049d301250d18812bc"; }; }; - "clipboardy-1.2.2" = { + "clipboardy-1.2.3" = { name = "clipboardy"; packageName = "clipboardy"; - version = "1.2.2"; + version = "1.2.3"; src = fetchurl { - url = "https://registry.npmjs.org/clipboardy/-/clipboardy-1.2.2.tgz"; - sha512 = "2pq14hxz6w4k5yvndrm1fv3iyscdqf5c4nja421gl2661didzh80r08zddd84zny94831qs44biamjhvwmqh40pfy3pjv3vwl2ap8np"; + url = "https://registry.npmjs.org/clipboardy/-/clipboardy-1.2.3.tgz"; + sha512 = "0j60cwp5vpc7v13m0d5rgh6h5jf6yxnywfb1wgbdn7lalklrr5ncvfkkqk6xj7b046bl2jabfqifk3yl6agd93ixfmywif2xfc4hqyr"; }; }; "clite-0.3.0" = { @@ -4360,6 +4450,15 @@ let sha1 = "d217d1e961118e3ac9a4b8bba3285553bf647cdb"; }; }; + "clone-buffer-1.0.0" = { + name = "clone-buffer"; + packageName = "clone-buffer"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/clone-buffer/-/clone-buffer-1.0.0.tgz"; + sha1 = "e3e25b207ac4e701af721e2cb5a16792cac3dc58"; + }; + }; "clone-deep-0.3.0" = { name = "clone-deep"; packageName = "clone-deep"; @@ -4396,6 +4495,24 @@ let sha1 = "b88f94a82cf38b8791d58046ea4029ad88ca99d1"; }; }; + "clone-stats-1.0.0" = { + name = "clone-stats"; + packageName = "clone-stats"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/clone-stats/-/clone-stats-1.0.0.tgz"; + sha1 = "b3782dff8bb5474e18b9b6bf0fdfe782f8777680"; + }; + }; + "cloneable-readable-1.0.0" = { + name = "cloneable-readable"; + packageName = "cloneable-readable"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/cloneable-readable/-/cloneable-readable-1.0.0.tgz"; + sha1 = "a6290d413f217a61232f95e458ff38418cfb0117"; + }; + }; "cmd-shim-2.0.2" = { name = "cmd-shim"; packageName = "cmd-shim"; @@ -4648,13 +4765,13 @@ let sha1 = "0137e657baa5a7541c57ac37ac5fc07d73b4dc1f"; }; }; - "combined-stream-1.0.5" = { + "combined-stream-1.0.6" = { name = "combined-stream"; packageName = "combined-stream"; - version = "1.0.5"; + version = "1.0.6"; src = fetchurl { - url = "https://registry.npmjs.org/combined-stream/-/combined-stream-1.0.5.tgz"; - sha1 = "938370a57b4a51dea2c77c15d5c5fdf895164009"; + url = "https://registry.npmjs.org/combined-stream/-/combined-stream-1.0.6.tgz"; + sha1 = "723e7df6e801ac5613113a7e445a9b69cb632818"; }; }; "command-join-2.0.0" = { @@ -4738,15 +4855,6 @@ let sha512 = "2yi2hwf0bghfnv1fdgd4wvh7s0acjrgqbgww97ncm6i6s6ffs1zahnj48f6gqpqj6fsf0jigvnr0civ25k2160c38281r80wvg7jkkg"; }; }; - "commander-2.12.2" = { - name = "commander"; - packageName = "commander"; - version = "2.12.2"; - src = fetchurl { - url = "https://registry.npmjs.org/commander/-/commander-2.12.2.tgz"; - sha512 = "007wb3baahjcrv17kgxryqjlsyr3c3kl2y07p85m4ia78pba9xyjr3cgi95jjrwq8qq550s78hj06f7z0ab8ssrxk6w06afjsmxln84"; - }; - }; "commander-2.13.0" = { name = "commander"; packageName = "commander"; @@ -4756,6 +4864,15 @@ let sha512 = "1h27ar13gbld2jk6wk84irqmyz6ya6b4dzmxb6nq8azyi48iq8pqqyq90jwzxqb3i7j167y5fpiys6v7vvjzhm8bbd8rya1kzgr4nri"; }; }; + "commander-2.14.1" = { + name = "commander"; + packageName = "commander"; + version = "2.14.1"; + src = fetchurl { + url = "https://registry.npmjs.org/commander/-/commander-2.14.1.tgz"; + sha512 = "11j7mwxfdnhi3yfkhxjvfkg1mzdsi3wq7iygma6ksmj1f7hfs0z8rpfcysqmy85f67mqvzhda3w1lyy1jqxxm31k799sazbipm7b17r"; + }; + }; "commander-2.6.0" = { name = "commander"; packageName = "commander"; @@ -4801,6 +4918,15 @@ let sha512 = "0jx2cncv7x5ms1gg2vks5bhxi9c5jbwymfk42dzmp9vrxrmhrl9vaw4wsh4lvf65shxmq1v8f8s0i3rkyk2x8mrfpq2m30famkgv24f"; }; }; + "commondir-1.0.1" = { + name = "commondir"; + packageName = "commondir"; + version = "1.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/commondir/-/commondir-1.0.1.tgz"; + sha1 = "ddd800da0c66127393cca5950ea968a3aaf1253b"; + }; + }; "commoner-0.10.8" = { name = "commoner"; packageName = "commoner"; @@ -4873,13 +4999,13 @@ let sha1 = "524a9f10903f3a813389b0225d27c48bb751890f"; }; }; - "compressible-2.0.12" = { + "compressible-2.0.13" = { name = "compressible"; packageName = "compressible"; - version = "2.0.12"; + version = "2.0.13"; src = fetchurl { - url = "https://registry.npmjs.org/compressible/-/compressible-2.0.12.tgz"; - sha1 = "c59a5c99db76767e9876500e271ef63b3493bd66"; + url = "https://registry.npmjs.org/compressible/-/compressible-2.0.13.tgz"; + sha1 = "0d1020ab924b2fdb4d6279875c7d6daba6baa7a9"; }; }; "compression-1.5.2" = { @@ -4891,13 +5017,13 @@ let sha1 = "b03b8d86e6f8ad29683cba8df91ddc6ffc77b395"; }; }; - "compression-1.7.1" = { + "compression-1.7.2" = { name = "compression"; packageName = "compression"; - version = "1.7.1"; + version = "1.7.2"; src = fetchurl { - url = "https://registry.npmjs.org/compression/-/compression-1.7.1.tgz"; - sha1 = "eff2603efc2e22cf86f35d2eb93589f9875373db"; + url = "https://registry.npmjs.org/compression/-/compression-1.7.2.tgz"; + sha1 = "aaffbcd6aaf854b44ebb280353d5ad1651f59a69"; }; }; "concat-map-0.0.1" = { @@ -5044,13 +5170,13 @@ let sha1 = "6d30d7a63c7f170857a6b3aa6b363d973dca588e"; }; }; - "connect-3.6.5" = { + "connect-3.6.6" = { name = "connect"; packageName = "connect"; - version = "3.6.5"; + version = "3.6.6"; src = fetchurl { - url = "https://registry.npmjs.org/connect/-/connect-3.6.5.tgz"; - sha1 = "fb8dde7ba0763877d0ec9df9dac0b4b40e72c7da"; + url = "https://registry.npmjs.org/connect/-/connect-3.6.6.tgz"; + sha1 = "09eff6c55af7236e137135a72574858b6786f524"; }; }; "connect-busboy-0.0.2" = { @@ -5152,13 +5278,13 @@ let sha1 = "4b945d9937907bcd98ee575122c3817516544141"; }; }; - "constantinople-3.1.0" = { + "constantinople-3.1.2" = { name = "constantinople"; packageName = "constantinople"; - version = "3.1.0"; + version = "3.1.2"; src = fetchurl { - url = "https://registry.npmjs.org/constantinople/-/constantinople-3.1.0.tgz"; - sha1 = "7569caa8aa3f8d5935d62e1fa96f9f702cd81c79"; + url = "https://registry.npmjs.org/constantinople/-/constantinople-3.1.2.tgz"; + sha512 = "2xnhrmlbkfpcvckxxrl0hjp6qhhqv1p7c6pwxgqp1g0sa5q5cc514xn48g9x8kqj7g1imzciwgb2msbhvhn0w0v92mb7105l43drqy9"; }; }; "constants-browserify-1.0.0" = { @@ -5243,85 +5369,85 @@ let sha1 = "bd727a7faed77e71ff3985ac93351a912733ad0f"; }; }; - "conventional-changelog-1.1.7" = { + "conventional-changelog-1.1.17" = { name = "conventional-changelog"; packageName = "conventional-changelog"; - version = "1.1.7"; + version = "1.1.17"; src = fetchurl { - url = "https://registry.npmjs.org/conventional-changelog/-/conventional-changelog-1.1.7.tgz"; - sha1 = "9151a62b1d8edb2d82711dabf5b7cf71041f82b1"; + url = "https://registry.npmjs.org/conventional-changelog/-/conventional-changelog-1.1.17.tgz"; + sha512 = "325x3h1qn2q1cg3x4dlia7sjanlv2qsj9c0nq8pzvr5fcwmg9qmf3am30bk4c4yjikyvfgpsvnp8rrh937bywd5y4d410hwfn1hbwhn"; }; }; - "conventional-changelog-angular-1.6.0" = { + "conventional-changelog-angular-1.6.6" = { name = "conventional-changelog-angular"; packageName = "conventional-changelog-angular"; - version = "1.6.0"; + version = "1.6.6"; src = fetchurl { - url = "https://registry.npmjs.org/conventional-changelog-angular/-/conventional-changelog-angular-1.6.0.tgz"; - sha1 = "0a26a071f2c9fcfcf2b86ba0cfbf6e6301b75bfa"; + url = "https://registry.npmjs.org/conventional-changelog-angular/-/conventional-changelog-angular-1.6.6.tgz"; + sha512 = "0v02kj8l2ji18jmcgjqa0nqsfn4h9jklgy4g9brf1ppm0n8344in3xpmyc5y06i5k3jjxl8sv90cndh2fbg4fhn0wr1ric258ajgr5j"; }; }; - "conventional-changelog-atom-0.1.2" = { + "conventional-changelog-atom-0.2.4" = { name = "conventional-changelog-atom"; packageName = "conventional-changelog-atom"; - version = "0.1.2"; + version = "0.2.4"; src = fetchurl { - url = "https://registry.npmjs.org/conventional-changelog-atom/-/conventional-changelog-atom-0.1.2.tgz"; - sha1 = "12595ad5267a6937c34cf900281b1c65198a4c63"; + url = "https://registry.npmjs.org/conventional-changelog-atom/-/conventional-changelog-atom-0.2.4.tgz"; + sha512 = "2b43fd5cpi069hsmfswl320lnpnvahmqmnrc9csk6qv0dq72nfj0jzafmbv5gsb3ds2ssr29lswwky61shy3n9hbxshq0qw3in6ds73"; }; }; - "conventional-changelog-cli-1.3.5" = { + "conventional-changelog-cli-1.3.15" = { name = "conventional-changelog-cli"; packageName = "conventional-changelog-cli"; - version = "1.3.5"; + version = "1.3.15"; src = fetchurl { - url = "https://registry.npmjs.org/conventional-changelog-cli/-/conventional-changelog-cli-1.3.5.tgz"; - sha1 = "46c51496216b7406588883defa6fac589e9bb31e"; + url = "https://registry.npmjs.org/conventional-changelog-cli/-/conventional-changelog-cli-1.3.15.tgz"; + sha512 = "0b9w7fp4mrgs12s4hznwzp79m9lza4fsygvdyma6qnd53h699jscc7h6jwlhdf398h5rpf91y2x0gl38fxfb9ydicshmvy5qdsgc4yh"; }; }; - "conventional-changelog-codemirror-0.2.1" = { + "conventional-changelog-codemirror-0.3.4" = { name = "conventional-changelog-codemirror"; packageName = "conventional-changelog-codemirror"; - version = "0.2.1"; + version = "0.3.4"; src = fetchurl { - url = "https://registry.npmjs.org/conventional-changelog-codemirror/-/conventional-changelog-codemirror-0.2.1.tgz"; - sha1 = "299a4f7147baf350e6c8158fc54954a291c5cc09"; + url = "https://registry.npmjs.org/conventional-changelog-codemirror/-/conventional-changelog-codemirror-0.3.4.tgz"; + sha512 = "33091h0zm06gdwhcqi5c3xvcjl6fw8cj3wvis9hyl5gix1vl2wd2pifymgp7rag6dbyzilb0g5q3ak29dcsrdzizqzibk8m0hdfkkph"; }; }; - "conventional-changelog-core-1.9.5" = { + "conventional-changelog-core-2.0.5" = { name = "conventional-changelog-core"; packageName = "conventional-changelog-core"; - version = "1.9.5"; + version = "2.0.5"; src = fetchurl { - url = "https://registry.npmjs.org/conventional-changelog-core/-/conventional-changelog-core-1.9.5.tgz"; - sha1 = "5db7566dad7c0cb75daf47fbb2976f7bf9928c1d"; + url = "https://registry.npmjs.org/conventional-changelog-core/-/conventional-changelog-core-2.0.5.tgz"; + sha512 = "1agyx5rj0lbrky9ndhha25la98lh2h1lyli2r4r27r1p0pr48niwg04al4whnvcldh0592fmyrdgf8vqqp5n6xz3df43j6dkpnnrzcl"; }; }; - 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sha1 = "2c2a11beb216f80649ba72834180293b687c0662"; + url = "https://registry.npmjs.org/conventional-changelog-eslint/-/conventional-changelog-eslint-1.0.4.tgz"; + sha512 = "3zk9p0rc8xns93flvpc0lnyfqdyv48yc3m2z71da07gj8fbmbrxs0px30xnlqzdwmbcz86i9fksxrcnqq9mhlwcfkwyzma396n4cxpp"; }; }; - "conventional-changelog-express-0.2.1" = { + "conventional-changelog-express-0.3.4" = { name = "conventional-changelog-express"; packageName = "conventional-changelog-express"; - version = "0.2.1"; + version = "0.3.4"; src = fetchurl { - url = "https://registry.npmjs.org/conventional-changelog-express/-/conventional-changelog-express-0.2.1.tgz"; - sha1 = "838d9e1e6c9099703b150b9c19aa2d781742bd6c"; + url = "https://registry.npmjs.org/conventional-changelog-express/-/conventional-changelog-express-0.3.4.tgz"; + sha512 = "3w3pm3dqwn8bj29809j0ivybw8vn2grnz486h9bm4kk9bn4849k9pxiqmx2ifpqf09hdl17fjk1xw320zz33wnvjzx78kbrpmpi9r9k"; }; }; "conventional-changelog-jquery-0.1.0" = { @@ -5342,49 +5468,58 @@ let sha1 = "0479eb443cc7d72c58bf0bcf0ef1d444a92f0e5c"; }; }; - "conventional-changelog-jshint-0.2.1" = { + "conventional-changelog-jshint-0.3.4" = { name = "conventional-changelog-jshint"; packageName = "conventional-changelog-jshint"; - version = "0.2.1"; + version = "0.3.4"; src = fetchurl { - url = "https://registry.npmjs.org/conventional-changelog-jshint/-/conventional-changelog-jshint-0.2.1.tgz"; - sha1 = "86139bb3ac99899f2b177e9617e09b37d99bcf3a"; + url = "https://registry.npmjs.org/conventional-changelog-jshint/-/conventional-changelog-jshint-0.3.4.tgz"; + sha512 = "0lzbgx3x2bfchxp8p4ppjavnp4yywjks3486yrxanq3skq0x5g4wnbhcf2viwm167mhn3aiawxygsxql5ww8md1xzssdrqb730fmnh9"; }; }; - "conventional-changelog-writer-2.0.3" = { + "conventional-changelog-preset-loader-1.1.6" = { + name = "conventional-changelog-preset-loader"; + packageName = "conventional-changelog-preset-loader"; + version = "1.1.6"; + src = fetchurl { + url = "https://registry.npmjs.org/conventional-changelog-preset-loader/-/conventional-changelog-preset-loader-1.1.6.tgz"; + sha512 = "12qk33piqbilkyrvin1vsjzp5pcvs7sschn5jry272r1hnv3x0jrwb1dlnik8vpp3zqai6n70h4ls55q2ch5n13a6g25c1hvhzwhqy9"; + }; + }; + "conventional-changelog-writer-3.0.4" = { name = "conventional-changelog-writer"; packageName = "conventional-changelog-writer"; - version = "2.0.3"; + version = "3.0.4"; src = fetchurl { - url = "https://registry.npmjs.org/conventional-changelog-writer/-/conventional-changelog-writer-2.0.3.tgz"; - sha512 = "1nchhqyp5qmrwqn9yxrkn8zjhlk1ph5jgnky26lzkrd1j4lh2n93602xw1zm6gv7qg48r61qzk5qh74v480nx4q7d8zilfb8pnn2kfq"; + url = "https://registry.npmjs.org/conventional-changelog-writer/-/conventional-changelog-writer-3.0.4.tgz"; + sha512 = "1ryw2mmza9y6bk5hs2ivhvp9p5hq7hhydhis2880w41dajr193zvccwhglp7js7j435d3i2d38i5aikydqg2r4jdc7753w4d22zyiqi"; }; }; - "conventional-commits-filter-1.1.1" = { + "conventional-commits-filter-1.1.5" = { name = "conventional-commits-filter"; packageName = "conventional-commits-filter"; - version = "1.1.1"; + version = "1.1.5"; src = fetchurl { - url = "https://registry.npmjs.org/conventional-commits-filter/-/conventional-commits-filter-1.1.1.tgz"; - sha512 = "0jrsm3hlyq0a425d320l1rghxmmb621r0bcvlsfbdichzbyimflwn7wz1mhw62kdnr3wxskdpaq11f5qpdsz5g2d5f7ha4d4jvrl33d"; + url = "https://registry.npmjs.org/conventional-commits-filter/-/conventional-commits-filter-1.1.5.tgz"; + sha512 = "0dw3vksvzwig2hiiw1kky2p424136r2faa941bkcdy3ljhp7mgd9i8pz3vdccw23v51z7vhh1dkw7wg363qxg9kvcxr2lgwp1cgwgcs"; }; }; - "conventional-commits-parser-2.1.0" = { + "conventional-commits-parser-2.1.5" = { name = "conventional-commits-parser"; packageName = "conventional-commits-parser"; - version = "2.1.0"; + version = "2.1.5"; src = fetchurl { - url = "https://registry.npmjs.org/conventional-commits-parser/-/conventional-commits-parser-2.1.0.tgz"; - sha512 = "0mnckb77dj8jk9xspzh6q0kaybc5wyb2ny94qgnvbj5f1yjnk7s2sak86b0h3dhrfk4y9nncwfjpvsg8iyiary68sdbwrbl4gkz9h7h"; + url = "https://registry.npmjs.org/conventional-commits-parser/-/conventional-commits-parser-2.1.5.tgz"; + sha512 = "2nb2s8hrbv3sl19xzz9x5pqgmm4kimrsaqlzs8xa2wzr0zg68090xnlq5ifcbmcm47fg5l9m63kkri248idzrvz2y689y3jbbmhz84d"; }; }; - "conventional-recommended-bump-1.1.0" = { + "conventional-recommended-bump-1.2.1" = { name = "conventional-recommended-bump"; packageName = "conventional-recommended-bump"; - version = "1.1.0"; + version = "1.2.1"; src = fetchurl { - url = "https://registry.npmjs.org/conventional-recommended-bump/-/conventional-recommended-bump-1.1.0.tgz"; - sha512 = "3gh833x8hqmnxfmacs3ryrb2gh3y397ddkiwisv6g3dfz6j617i1fm22yq3r83y40pidmf1n77qzvwmbx4ws7jn4yydfxypi6fhgbaq"; + url = "https://registry.npmjs.org/conventional-recommended-bump/-/conventional-recommended-bump-1.2.1.tgz"; + sha512 = "3irsgzxrhc2s4y4mlq7vmrvrhn74kpda34sn2ladm98q4gy88l7dpqxs8xf6lxm4sai5qqwzxk1gzlrfgvsrmfzzvmxk0hi77lcd650"; }; }; "convert-source-map-1.1.3" = { @@ -5549,6 +5684,15 @@ let sha1 = "7c8a615f5481c61ab9f16c833731bcb8f663b99b"; }; }; + "copy-concurrently-1.0.5" = { + name = "copy-concurrently"; + packageName = "copy-concurrently"; + version = "1.0.5"; + src = fetchurl { + url = "https://registry.npmjs.org/copy-concurrently/-/copy-concurrently-1.0.5.tgz"; + sha512 = "3c1ggiqqnjgqlwdnimx94gm176c8rjsrih5qw2lbm642l8x7grx07v065k4j89c1p0adkm7v6sz11drb6j6sp51np2m1cazvycnhrvz"; + }; + }; "copy-descriptor-0.1.1" = { name = "copy-descriptor"; packageName = "copy-descriptor"; @@ -5657,15 +5801,6 @@ let sha1 = "b5fd54220aa2bc5ab57aab7140c940754503c1a7"; }; }; - "cors-2.8.3" = { - name = "cors"; - packageName = "cors"; - version = "2.8.3"; - src = fetchurl { - url = "https://registry.npmjs.org/cors/-/cors-2.8.3.tgz"; - sha1 = "4cf78e1d23329a7496b2fc2225b77ca5bb5eb802"; - }; - }; "cors-2.8.4" = { name = "cors"; packageName = "cors"; @@ -5783,13 +5918,13 @@ let sha1 = "acb9e221a4e17bdb076e90657c42b93e3726cf06"; }; }; - "cron-1.2.1" = { + "cron-1.3.0" = { name = "cron"; packageName = "cron"; - version = "1.2.1"; + version = "1.3.0"; src = fetchurl { - url = "https://registry.npmjs.org/cron/-/cron-1.2.1.tgz"; - sha1 = "3a86c09b41b8f261ac863a7cc85ea4735857eab2"; + url = "https://registry.npmjs.org/cron/-/cron-1.3.0.tgz"; + sha512 = "3iq9zg5plipbybssrb38lhlqdp1p4mbrmvp92zc477z9ck9k90dnxwgssjzb2a572g801q3c75mwy5hmx1ccmiqf5in6ck0k7n8bx1b"; }; }; "cross-spawn-4.0.0" = { @@ -6143,6 +6278,15 @@ let sha1 = "1bcfa56b081448cdb5e12bfc1bfad34b47fba8f3"; }; }; + "cyclist-0.2.2" = { + name = "cyclist"; + packageName = "cyclist"; + version = "0.2.2"; + src = fetchurl { + url = "https://registry.npmjs.org/cyclist/-/cyclist-0.2.2.tgz"; + sha1 = "1b33792e11e914a2fd6d6ed6447464444e5fa640"; + }; + }; "d-1.0.0" = { name = "d"; packageName = "d"; @@ -6269,13 +6413,13 @@ let sha1 = "69449ac8a368593a8f71902b282390c3655ab4b8"; }; }; - "dat-node-3.5.6" = { + "dat-node-3.5.8" = { name = "dat-node"; packageName = "dat-node"; - version = "3.5.6"; + version = "3.5.8"; src = fetchurl { - url = "https://registry.npmjs.org/dat-node/-/dat-node-3.5.6.tgz"; - sha512 = "17i7n2n3bappi34pnv2240cr5baawf2ab8wf22bmlxx4xkcb5g0z24ycz542fsx8myn4fyjgfgdhwbv44f5sz1c4z7i7g4q3ah9n7zh"; + url = "https://registry.npmjs.org/dat-node/-/dat-node-3.5.8.tgz"; + sha512 = "3j28p80dwmic3g00asmcpgiv3sh3s8023x1023g7bm534h1ai8i2zryivx95gc22is64k9mynmqr2g0ny25xp1f7h1cbc25klizg8dc"; }; }; "dat-registry-4.0.0" = { @@ -6287,22 +6431,22 @@ let sha512 = "0h84fdzm556p412p1xr0nl6ldf5xjd0qnd37im41bq78zm7lg4j4klcahg9pix1f0qdyd6gqz2a2j67z6vpb776v1bd0n1hr67pp988"; }; }; - "dat-secret-storage-4.0.0" = { + "dat-secret-storage-4.0.1" = { name = "dat-secret-storage"; packageName = "dat-secret-storage"; - version = "4.0.0"; + version = "4.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/dat-secret-storage/-/dat-secret-storage-4.0.0.tgz"; - sha1 = "01b219a5bc1619efc0f58122a3c6cebb1eb8b40a"; + url = "https://registry.npmjs.org/dat-secret-storage/-/dat-secret-storage-4.0.1.tgz"; + sha512 = "3ad9x7n3qxivrj03fsa8ll3i511ivclnyrv1421zklnmskkxxi2d2fykb1kx1sbwdyx35167a7k4mbw63jhxxaz6r54hpd9fad5wj05"; }; }; - "dat-storage-1.0.3" = { + "dat-storage-1.0.4" = { name = "dat-storage"; packageName = "dat-storage"; - version = "1.0.3"; + version = "1.0.4"; src = fetchurl { - url = "https://registry.npmjs.org/dat-storage/-/dat-storage-1.0.3.tgz"; - sha512 = "1n7gszxdkchx0bilz4phnanzmw00fkljwm9rl0z7cndi94xrb6pkzczh6x137xn62j9p7yp6nz24a82q8llsrlk3c1pwvn269cdx97a"; + url = "https://registry.npmjs.org/dat-storage/-/dat-storage-1.0.4.tgz"; + sha512 = "13cbr004milnmjisg774rqqw82vyjg1p1d6gvm3xji516rq7zzc1x7da397njig5s2rg2qmw1dixdn4cpkmvc8irq4y1dzb3h46sz2c"; }; }; "dat-swarm-defaults-1.0.0" = { @@ -6350,15 +6494,6 @@ let sha1 = "61fb16cdc1274b3c9acaaffe9fc69df8720a2b64"; }; }; - "dateformat-1.0.12" = { - name = "dateformat"; - packageName = "dateformat"; - version = "1.0.12"; - src = fetchurl { - url = "https://registry.npmjs.org/dateformat/-/dateformat-1.0.12.tgz"; - sha1 = "9f124b67594c937ff706932e4a642cca8dbbfee9"; - }; - }; "dateformat-1.0.2-1.2.3" = { name = "dateformat"; packageName = "dateformat"; @@ -6377,6 +6512,15 @@ let sha1 = "4065e2013cf9fb916ddfd82efb506ad4c6769062"; }; }; + "dateformat-3.0.3" = { + name = "dateformat"; + packageName = "dateformat"; + version = "3.0.3"; + src = fetchurl { + url = "https://registry.npmjs.org/dateformat/-/dateformat-3.0.3.tgz"; + sha512 = "3fxpn11cnyqcz25h9krfrpnra9zi1zri0l4f42a89acybqgj6dyr6p0lskcjffahiwxxmmc0zvgalnlk2wa74b764cm7pd5si78884g"; + }; + }; "datland-swarm-defaults-1.0.2" = { name = "datland-swarm-defaults"; packageName = "datland-swarm-defaults"; @@ -6476,24 +6620,6 @@ let sha1 = "40c453e67e6e13c901ddec317af8986cda9eff8c"; }; }; - "debug-2.6.3" = { - name = "debug"; - packageName = "debug"; - version = "2.6.3"; - src = fetchurl { - url = "https://registry.npmjs.org/debug/-/debug-2.6.3.tgz"; - sha1 = "0f7eb8c30965ec08c72accfa0130c8b79984141d"; - }; - }; - "debug-2.6.7" = { - name = "debug"; - packageName = "debug"; - version = "2.6.7"; - src = fetchurl { - url = "https://registry.npmjs.org/debug/-/debug-2.6.7.tgz"; - sha1 = "92bad1f6d05bbb6bba22cca88bcd0ec894c2861e"; - }; - }; "debug-2.6.9" = { name = "debug"; packageName = "debug"; @@ -6530,6 +6656,15 @@ let sha512 = "0zc3slyk7cc9xjfcnw3nk2d1vkq4kxrjalavqgp3zykbgnp5v12xcs47kr436k0izbzyxhkrdww94p5g1lcmzcdqncc9p0mqzk6jji2"; }; }; + "decamelize-keys-1.1.0" = { + name = "decamelize-keys"; + packageName = "decamelize-keys"; + version = "1.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/decamelize-keys/-/decamelize-keys-1.1.0.tgz"; + sha1 = "d171a87933252807eb3cb61dc1c1445d078df2d9"; + }; + }; "decode-uri-component-0.2.0" = { name = "decode-uri-component"; packageName = "decode-uri-component"; @@ -6647,6 +6782,15 @@ let sha512 = "2sylzgq5rwi12ac5y4fbvyyhs128zlcrp1q1i0bkp27fvlg60hr1slxzckk22x2rzgmwsqqlvzyylm9v0gwzbsbprd3c1mg78c396gp"; }; }; + "deepmerge-2.0.1" = { + name = "deepmerge"; + packageName = "deepmerge"; + version = "2.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/deepmerge/-/deepmerge-2.0.1.tgz"; + sha512 = "2qww1m640drvrkcyijaky5kpzdg7pqixb2qk3ms5r99p9ch6isv8a6h0yqwypsw42d1hlg3v7v1x4x7cy0v10pn87cms9vaqa4g10sl"; + }; + }; "default-browser-id-1.0.4" = { name = "default-browser-id"; packageName = "default-browser-id"; @@ -6710,6 +6854,15 @@ let sha1 = "769ebaaf3f4a63aad3af9e8d304c9bbe79bfb0e6"; }; }; + "define-property-2.0.2" = { + name = "define-property"; + packageName = "define-property"; + version = "2.0.2"; + src = fetchurl { + url = "https://registry.npmjs.org/define-property/-/define-property-2.0.2.tgz"; + sha512 = "1hrk3pzr4hyhfnrjy1msrlj2zh769x4l35q9fq0a2cy2glq3h1iwjkpmvz39y9idwy71h9hd98lydi92485bzkff1dzm70wbr8vc0lg"; + }; + }; "defined-0.0.0" = { name = "defined"; packageName = "defined"; @@ -7304,13 +7457,13 @@ let sha1 = "dcd8488a26f563d61079e48c9f7b7e32373682cf"; }; }; - "domutils-1.6.2" = { + "domutils-1.7.0" = { name = "domutils"; packageName = "domutils"; - version = "1.6.2"; + version = "1.7.0"; src = fetchurl { - url = "https://registry.npmjs.org/domutils/-/domutils-1.6.2.tgz"; - sha1 = "1958cc0b4c9426e9ed367fb1c8e854891b0fa3ff"; + url = "https://registry.npmjs.org/domutils/-/domutils-1.7.0.tgz"; + sha512 = "076s2v293f9jixaddq6qmjc76y3z0kqddmjb4nclydp23y0jzpg6f7h32j6adilfdjxwwhxkclrhc1vn7rbsidvzcq32dkzq9fpc1rf"; }; }; "dot-prop-3.0.0" = { @@ -7466,13 +7619,13 @@ let sha1 = "4bc926274ec3b5abb5016e7e1d60921ac262b2a1"; }; }; - "editions-1.3.3" = { + "editions-1.3.4" = { name = "editions"; packageName = "editions"; - version = "1.3.3"; + version = "1.3.4"; src = fetchurl { - url = "https://registry.npmjs.org/editions/-/editions-1.3.3.tgz"; - sha1 = "0907101bdda20fac3cbe334c27cbd0688dc99a5b"; + url = "https://registry.npmjs.org/editions/-/editions-1.3.4.tgz"; + sha512 = "196fp42k8j9d8cmi0sqjj6wfqcr7y0c9zcrfv1bcs38ipkn78ivg3xl2f33x3hfiqnyp3gb5y7ndkgqpw433jn5rb43qq37dkxahdl3"; }; }; "editor-1.0.0" = { @@ -7602,24 +7755,6 @@ let sha1 = "ec79a3969b02d2ecf2b72254279bf99bc7a83932"; }; }; - "emojic-1.1.14" = { - name = "emojic"; - packageName = "emojic"; - version = "1.1.14"; - src = fetchurl { - url = "https://registry.npmjs.org/emojic/-/emojic-1.1.14.tgz"; - sha512 = "0j0wbbcyvx0qklz7xvqbv2w2n2vqzq5vhyv3jrnsvb775c0zr2bh7m3k7mh0aw6i4rbmgf8x6rw7bfvgzsh5hvlgj01w61xfml89b4z"; - }; - }; - "emojilib-2.2.12" = { - name = "emojilib"; - packageName = "emojilib"; - version = "2.2.12"; - src = fetchurl { - url = "https://registry.npmjs.org/emojilib/-/emojilib-2.2.12.tgz"; - sha512 = "2z6nk0nin1cmj81c54pxjyxgpa61d0g61sdn3swykk4j8n8mnba95m1s1cpjcr4wr96jhgyal1z4swd8pcazzp3a50msqir0vj4vcwq"; - }; - }; "emojis-list-2.1.0" = { name = "emojis-list"; packageName = "emojis-list"; @@ -7710,13 +7845,13 @@ let sha512 = "3ff3a0anvy48mmpay3jkzlrjvxmlclq823j8jmjfdhy48xpz1syz44bwr13zdh161x1vqzsclgwb6gvgrn9vymvq98qihrdr4hxcl4g"; }; }; - "engine.io-3.1.4" = { + "engine.io-3.1.5" = { name = "engine.io"; packageName = "engine.io"; - version = "3.1.4"; + version = "3.1.5"; src = fetchurl { - url = "https://registry.npmjs.org/engine.io/-/engine.io-3.1.4.tgz"; - sha1 = "3d0211b70a552ce841ffc7da8627b301a9a4162e"; + url = "https://registry.npmjs.org/engine.io/-/engine.io-3.1.5.tgz"; + sha512 = "1qcg5b143cxb4gxa9jpj51c8q9ihwb0sscwqicgwrghmfg8y2phqjzhlaxjsrd6z8h1mpsxzy00s54w9lx6vd27f1mj9iqqk6ya4khg"; }; }; "engine.io-client-1.3.1" = { @@ -7737,13 +7872,13 @@ let sha512 = "1kfc2cmjw891x0i9cm9alm93db5s40h3n4a3zcpjha7nrvz0s7ggzpp2x2v8zmnhp9278amjdm0j5lfkn3qxan7nanzhl4m4wgy1101"; }; }; - "engine.io-client-3.1.4" = { + "engine.io-client-3.1.5" = { name = "engine.io-client"; packageName = "engine.io-client"; - version = "3.1.4"; + version = "3.1.5"; src = fetchurl { - url = "https://registry.npmjs.org/engine.io-client/-/engine.io-client-3.1.4.tgz"; - sha1 = "4fcf1370b47163bd2ce9be2733972430350d4ea1"; + url = "https://registry.npmjs.org/engine.io-client/-/engine.io-client-3.1.5.tgz"; + sha512 = "3ld2inpqkyy451a7lpf8kmaf76zrj9a50yg28z1d1znhnnj40g3cnrcq93690lknhb6mjv0k1nav2cbqx2p3aqqhmav7kippy0nzzs6"; }; }; "engine.io-parser-1.0.6" = { @@ -7791,6 +7926,15 @@ let sha1 = "0421e339fd71419b3da13d129b3979040230476e"; }; }; + "enhanced-resolve-4.0.0" = { + name = "enhanced-resolve"; + packageName = "enhanced-resolve"; + version = "4.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/enhanced-resolve/-/enhanced-resolve-4.0.0.tgz"; + sha512 = "3r1f41kk9dzckpghscy0q2j6qzmzckbv4mc83y5d4kxg2r458wgsimljpr0ycx6pvg8sjwwdhh8750h1wrl3m54svaqf6pncvmpz34f"; + }; + }; "ensure-posix-path-1.0.2" = { name = "ensure-posix-path"; packageName = "ensure-posix-path"; @@ -7845,13 +7989,13 @@ let sha1 = "85675afba237c43f98de2d46adc0e532a4dcf48b"; }; }; - "errno-0.1.6" = { + "errno-0.1.7" = { name = "errno"; packageName = "errno"; - version = "0.1.6"; + version = "0.1.7"; src = fetchurl { - url = "https://registry.npmjs.org/errno/-/errno-0.1.6.tgz"; - sha512 = "0vny3xisd56kx193rhv6vpccjxlajjn9ss5wk96l1ya8zbpkwbjrrgrm9wpfm3xc8apx8z9xb0kjkw0y5qnc6gy1hf2qsas79093hr2"; + url = "https://registry.npmjs.org/errno/-/errno-0.1.7.tgz"; + sha512 = "2bdzcjwgdkg5yrvlw6my57pn77k4j7a2pzppwqrq4va9f5bd4b5mzbhwpklhsy1jl7w9sjvnfs30h42nhz2dbdfhagnh8dk6l2d3yii"; }; }; "error-7.0.2" = { @@ -7908,13 +8052,13 @@ let sha1 = "45355248a88979034b6792e19bb81f2b7975dd0d"; }; }; - "es5-ext-0.10.38" = { + "es5-ext-0.10.39" = { name = "es5-ext"; packageName = "es5-ext"; - version = "0.10.38"; + version = "0.10.39"; src = fetchurl { - url = "https://registry.npmjs.org/es5-ext/-/es5-ext-0.10.38.tgz"; - sha512 = "0m7d1yd67hb93gsxv7790h9ayxg3pwf3vgih9v2kxqvsg073wim7jgwf3z57lksdczxnqv2d8gm4mfk4b29f6rc27a7c09vz9w348wc"; + url = "https://registry.npmjs.org/es5-ext/-/es5-ext-0.10.39.tgz"; + sha512 = "3k07fsn3x64wphzrvb5bhv4r8drmvranrh43j8pn7rsnpyk8pia81vy1d4g3ix0ami3xs4crqxpanxff9dwfk7czrl4m5y72dk9fmh2"; }; }; "es5-ext-0.8.2" = { @@ -8097,13 +8241,13 @@ let sha1 = "5a5b53af4693110bebb0867aa3430dd3b70a1018"; }; }; - "escodegen-1.9.0" = { + "escodegen-1.9.1" = { name = "escodegen"; packageName = "escodegen"; - version = "1.9.0"; + version = "1.9.1"; src = fetchurl { - url = "https://registry.npmjs.org/escodegen/-/escodegen-1.9.0.tgz"; - sha512 = "0il8dp1bh3n1am3xx5pazmpjb5m8wzdn9xg1lgh4j8axvsy8v24i1171c04qafx0j4xsaq76j29ljq2srf4i3kdl3qbrn9psjy1hhxz"; + url = "https://registry.npmjs.org/escodegen/-/escodegen-1.9.1.tgz"; + sha512 = "3nl4jbvigqc5ax1f35b601vlca4fa4ghr27wfglgrmv7h5pssnkh7px0vjh8wzrkjvx8bw7c71b0axc307akkjd1vkl2nj0acxy657a"; }; }; "escope-3.6.0" = { @@ -8133,13 +8277,13 @@ let sha512 = "3l1j4qy0gqa8rkwpdsmkkbqcmbx23ym8h64d1bbj5i5ds5ks0g91myldzp0y25r6b3ba9646hy4i2jiad2jmm8h68z89i2larkvyhyc"; }; }; - "eslint-4.16.0" = { + "eslint-4.18.1" = { name = "eslint"; packageName = "eslint"; - version = "4.16.0"; + version = "4.18.1"; src = fetchurl { - url = "https://registry.npmjs.org/eslint/-/eslint-4.16.0.tgz"; - sha512 = "330nda1zwh0sqsxsfmlmhbg903gz6n9n4zy870gc2k95wrg1bc7jysfyn98nk2bd8p821xszpygp1vs1i7csapxfb3q2dp1n3hxamb1"; + url = "https://registry.npmjs.org/eslint/-/eslint-4.18.1.tgz"; + sha512 = "21i792qmqdz7dzm68ncjf4q3bi3c5kb1q103hkdp868mm9p7gd153hjzsq70mfyfx0vrjzna8x734xmpkp9himw32svf7j24jjrzx40"; }; }; "eslint-plugin-no-unsafe-innerhtml-1.0.16" = { @@ -8169,13 +8313,13 @@ let sha512 = "02hr99x8cnc80p9hn5si7mngqpzvvjkxmdv8sch68z0qpqwjdlx3j1w6d9rhr6wgcnqf1mrxyji8wvfddbf7xr13z2nzihv29gvyfdb"; }; }; - "espree-3.5.2" = { + "espree-3.5.3" = { name = "espree"; packageName = "espree"; - version = "3.5.2"; + version = "3.5.3"; src = fetchurl { - url = "https://registry.npmjs.org/espree/-/espree-3.5.2.tgz"; - sha512 = "04mnrkdqs32w98h9sfkn9i9zkyqj69sz2q1kxpnmsryjnfd9jrpqqlwrik73a80mdz86xckbr7vayw1dwkxhhnbvs4zciqsiiwlm9xi"; + url = "https://registry.npmjs.org/espree/-/espree-3.5.3.tgz"; + sha512 = "1cv3w3jgkm5sdaszxn172lhwgwr13w7sw75hmigqppmr9n2xx761r5cm32xhhg25ws8h00iy746qka5l85nm6sx5qci8iyfj00fsbb7"; }; }; "esprima-1.0.4" = { @@ -8232,13 +8376,13 @@ let sha1 = "cfba8b57d7fba93f17298a8a006a04cda13d80fa"; }; }; - "esrecurse-4.2.0" = { + "esrecurse-4.2.1" = { name = "esrecurse"; packageName = "esrecurse"; - version = "4.2.0"; + version = "4.2.1"; src = fetchurl { - url = "https://registry.npmjs.org/esrecurse/-/esrecurse-4.2.0.tgz"; - sha1 = "fa9568d98d3823f9a41d91e902dcab9ea6e5b163"; + url = "https://registry.npmjs.org/esrecurse/-/esrecurse-4.2.1.tgz"; + sha512 = "06zyknk70y80n428x20wvjqy5822wgz2yaxzw387njnz3ar6ixzjcxzr2jsl8wrm0m9jpa4ysbcr9znpk6gbkqd7wby084zxw3l317b"; }; }; "estraverse-1.9.3" = { @@ -8394,13 +8538,13 @@ let sha1 = "1c86991d816ad1e504750e73874224ecf3bec508"; }; }; - "eventemitter3-3.0.0" = { + "eventemitter3-3.0.1" = { name = "eventemitter3"; packageName = "eventemitter3"; - version = "3.0.0"; + version = "3.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/eventemitter3/-/eventemitter3-3.0.0.tgz"; - sha512 = "0jijxlrlxb3vf5xqxibisd132qzlh9ag6ckxgvz791d4rqrzvzc2mzzn86jx1bgbsym1wi0pgm017i4rd5m84g1d38n56zqvh5g2r7b"; + url = "https://registry.npmjs.org/eventemitter3/-/eventemitter3-3.0.1.tgz"; + sha512 = "0c5685grn5npm90n22lw5hjz93ga3ffc3j6jk5rs4sz0w7ymwj942v3w94ikkgxpvxj7mfawsdrczwad0b7srbkynbwac7xvsxqzq20"; }; }; "events-1.1.1" = { @@ -8412,6 +8556,15 @@ let sha1 = "9ebdb7635ad099c70dcc4c2a1f5004288e8bd924"; }; }; + "events-2.0.0" = { + name = "events"; + packageName = "events"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/events/-/events-2.0.0.tgz"; + sha512 = "1r878as79mx3xg56nvjxxbryqa8lqn8xmiqi1xqfx2vjygnfaf15h5l658a9ikfr1bhc6ygxny8jr8ddjxpzlh6y443rxv08di3kwxg"; + }; + }; "events.node-0.4.9" = { name = "events.node"; packageName = "events.node"; @@ -8619,15 +8772,6 @@ let sha1 = "8df3d5a9ac848585f00a0777601823faecd3b148"; }; }; - "express-4.15.3" = { - name = "express"; - packageName = "express"; - version = "4.15.3"; - src = fetchurl { - url = "https://registry.npmjs.org/express/-/express-4.15.3.tgz"; - sha1 = "bab65d0f03aa80c358408972fc700f916944b662"; - }; - }; "express-4.16.2" = { name = "express"; packageName = "express"; @@ -8682,15 +8826,6 @@ let sha1 = "5cc98f3f5ff84ed835f91cbf0aabd0c7107400af"; }; }; - "express-session-1.15.2" = { - name = "express-session"; - packageName = "express-session"; - version = "1.15.2"; - src = fetchurl { - url = "https://registry.npmjs.org/express-session/-/express-session-1.15.2.tgz"; - sha1 = "d98516443a4ccb8688e1725ae584c02daa4093d4"; - }; - }; "express-session-1.15.6" = { name = "express-session"; packageName = "express-session"; @@ -8808,6 +8943,15 @@ let sha1 = "5abbedc98c0d5202e3278727f9192d7e086c6be1"; }; }; + "extract-text-webpack-plugin-3.0.2" = { + name = "extract-text-webpack-plugin"; + packageName = "extract-text-webpack-plugin"; + version = "3.0.2"; + src = fetchurl { + url = "https://registry.npmjs.org/extract-text-webpack-plugin/-/extract-text-webpack-plugin-3.0.2.tgz"; + sha512 = "10rc4hfyzf8n5b30q0fpawnbnr1cs33mmrz9466hhcxjzlz7ys44zbsr5kbvr1jn5nivcr91nmfhpq2mqi1wxmr19zsnimri5kwppvf"; + }; + }; "extract-zip-1.5.0" = { name = "extract-zip"; packageName = "extract-zip"; @@ -8889,13 +9033,13 @@ let sha1 = "f41125e3d84f2e7d89a43d06d958c8f78be16be1"; }; }; - "fast-deep-equal-1.0.0" = { + "fast-deep-equal-1.1.0" = { name = "fast-deep-equal"; packageName = "fast-deep-equal"; - version = "1.0.0"; + version = "1.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/fast-deep-equal/-/fast-deep-equal-1.0.0.tgz"; - sha1 = "96256a3bc975595eb36d82e9929d060d893439ff"; + url = "https://registry.npmjs.org/fast-deep-equal/-/fast-deep-equal-1.1.0.tgz"; + sha1 = "c053477817c86b51daa853c81e059b733d023614"; }; }; "fast-diff-1.1.2" = { @@ -8925,6 +9069,15 @@ let sha1 = "66e4028e381eaa002edeb280d10238f3a46c3402"; }; }; + "fast-json-patch-1.2.2" = { + name = "fast-json-patch"; + packageName = "fast-json-patch"; + version = "1.2.2"; + src = fetchurl { + url = "https://registry.npmjs.org/fast-json-patch/-/fast-json-patch-1.2.2.tgz"; + sha1 = "d377d97c6911dbdd2a1c80bfacda048a4f83bbf9"; + }; + }; "fast-json-patch-2.0.6" = { name = "fast-json-patch"; packageName = "fast-json-patch"; @@ -9087,13 +9240,13 @@ let sha1 = "c1c4b9bee3e09725ddb106b75c1e301fe2f18b26"; }; }; - "filesize-3.5.11" = { + "filesize-3.6.0" = { name = "filesize"; packageName = "filesize"; - version = "3.5.11"; + version = "3.6.0"; src = fetchurl { - url = "https://registry.npmjs.org/filesize/-/filesize-3.5.11.tgz"; - sha512 = "3bg35im21jf6dhyrcajczdjl3rjm5mphdhansyfbpzm067vv3jp91n43nrzxf8q6nx3b5vkn2my1rskyp4pmg91xzdq01lawyifazk4"; + url = "https://registry.npmjs.org/filesize/-/filesize-3.6.0.tgz"; + sha512 = "1vldkz70kikg8b3ac8l686hm1aplkwqmllm9lg32cvy50hqzcqhari8pl2c41zsvl3bpzzfv7v8db0j91c0qd9vx8wz4w2nhsv9d4w3"; }; }; "fill-range-2.2.3" = { @@ -9177,6 +9330,15 @@ let sha1 = "ce0b6855b45853e791b2fcc680046d88253dd7f5"; }; }; + "find-cache-dir-1.0.0" = { + name = "find-cache-dir"; + packageName = "find-cache-dir"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/find-cache-dir/-/find-cache-dir-1.0.0.tgz"; + sha1 = "9288e3e9e3cc3748717d39eade17cf71fc30ee6f"; + }; + }; "find-elm-dependencies-1.0.2" = { name = "find-elm-dependencies"; packageName = "find-elm-dependencies"; @@ -9402,6 +9564,15 @@ let sha1 = "c952de2240f812ebda0aa8006d7776ee2acf7d74"; }; }; + "flush-write-stream-1.0.2" = { + name = "flush-write-stream"; + packageName = "flush-write-stream"; + version = "1.0.2"; + src = fetchurl { + url = "https://registry.npmjs.org/flush-write-stream/-/flush-write-stream-1.0.2.tgz"; + sha1 = "c81b90d8746766f1a609a46809946c45dd8ae417"; + }; + }; "follow-redirects-0.0.3" = { name = "follow-redirects"; packageName = "follow-redirects"; @@ -9420,13 +9591,13 @@ let sha1 = "8e34298cbd2e176f254effec75a1c78cc849fd37"; }; }; - "follow-redirects-1.2.4" = { + "follow-redirects-1.3.0" = { name = "follow-redirects"; packageName = "follow-redirects"; - version = "1.2.4"; + version = "1.3.0"; src = fetchurl { - url = "https://registry.npmjs.org/follow-redirects/-/follow-redirects-1.2.4.tgz"; - sha512 = "2mxs6nll208xgqy9asgc0iq4k9ynd2aanig2qkfi3drd8axdafhhx36a58ssksmjgl6s1m2bh2j8igrlpm3k11cg58nhmqbxhlkmv2a"; + url = "https://registry.npmjs.org/follow-redirects/-/follow-redirects-1.3.0.tgz"; + sha1 = "f684871fc116d2e329fda55ef67687f4fabc905c"; }; }; "follow-redirects-1.4.1" = { @@ -9573,13 +9744,13 @@ let sha1 = "33c183acf193276ecaa98143a69e94bfee1750d1"; }; }; - "form-data-2.3.1" = { + "form-data-2.3.2" = { name = "form-data"; packageName = "form-data"; - version = "2.3.1"; + version = "2.3.2"; src = fetchurl { - url = "https://registry.npmjs.org/form-data/-/form-data-2.3.1.tgz"; - sha1 = "6fb94fbd71885306d73d15cc497fe4cc4ecd44bf"; + url = "https://registry.npmjs.org/form-data/-/form-data-2.3.2.tgz"; + sha1 = "4970498be604c20c005d4f5c23aecd21d6b49099"; }; }; "formidable-1.0.11" = { @@ -9672,15 +9843,6 @@ let sha1 = "651f838e22424e7566de161d8358caa199f83d4f"; }; }; - "fresh-0.5.0" = { - name = "fresh"; - packageName = "fresh"; - version = "0.5.0"; - src = fetchurl { - url = "https://registry.npmjs.org/fresh/-/fresh-0.5.0.tgz"; - sha1 = "f474ca5e6a9246d6fd8e0953cfa9b9c805afa78e"; - }; - }; "fresh-0.5.2" = { name = "fresh"; packageName = "fresh"; @@ -9816,6 +9978,15 @@ let sha512 = "2hpc9wbzrndi5bswg9q9hwxmg4yd99zbvssxnz6g04clj68qhd8c83zn282v3q7f9h1xi7c4lmnn341nlgfpwby2k14738pr796a416"; }; }; + "fs-write-stream-atomic-1.0.10" = { + name = "fs-write-stream-atomic"; + packageName = "fs-write-stream-atomic"; + version = "1.0.10"; + src = fetchurl { + url = "https://registry.npmjs.org/fs-write-stream-atomic/-/fs-write-stream-atomic-1.0.10.tgz"; + sha1 = "b47df53493ef911df75731e70a9ded0189db40c9"; + }; + }; "fs.extra-1.3.2" = { name = "fs.extra"; packageName = "fs.extra"; @@ -10131,13 +10302,13 @@ let sha1 = "2c5a6638d893934b9b55037d0ad82cb7004b2679"; }; }; - "git-raw-commits-1.3.0" = { + "git-raw-commits-1.3.4" = { name = "git-raw-commits"; packageName = "git-raw-commits"; - version = "1.3.0"; + version = "1.3.4"; src = fetchurl { - url = "https://registry.npmjs.org/git-raw-commits/-/git-raw-commits-1.3.0.tgz"; - sha1 = "0bc8596e90d5ffe736f7f5546bd2d12f73abaac6"; + url = "https://registry.npmjs.org/git-raw-commits/-/git-raw-commits-1.3.4.tgz"; + sha512 = "0yfkxk071bahnzw2h5ip6qb7mq76psfwiqs232gkzr91hc55kqw57pjn33j04h3xiwvgrikl20mbccisi006rxyh0lwfvj7bkivwwqv"; }; }; "git-remote-origin-url-2.0.0" = { @@ -10158,13 +10329,13 @@ let sha1 = "a0c2e3dd392abcf6b76962e27fc75fb3223449ce"; }; }; - "git-semver-tags-1.2.3" = { + "git-semver-tags-1.3.4" = { name = "git-semver-tags"; packageName = "git-semver-tags"; - version = "1.2.3"; + version = "1.3.4"; src = fetchurl { - url = "https://registry.npmjs.org/git-semver-tags/-/git-semver-tags-1.2.3.tgz"; - sha1 = "188b453882bf9d7a23afd31baba537dab7388d5d"; + url = "https://registry.npmjs.org/git-semver-tags/-/git-semver-tags-1.3.4.tgz"; + sha512 = "0hhdj4992a96ys5i9k6pjbn99wwsabb92drxr0s7vzxyxlpydrvjzbb4rwdnsd0rm7h92420yr2f3khpakkp6ivgg09fp9hhgprkvax"; }; }; "gitconfiglocal-1.0.0" = { @@ -10429,13 +10600,13 @@ let sha1 = "dbf743c6c14992593c655568cb66ed32c0122ebe"; }; }; - "globals-11.2.0" = { + "globals-11.3.0" = { name = "globals"; packageName = "globals"; - version = "11.2.0"; + version = "11.3.0"; src = fetchurl { - url = "https://registry.npmjs.org/globals/-/globals-11.2.0.tgz"; - sha512 = "0ad39906l0grsfy2953m3c6jkhbwakd89vbqprzz9g0cafvikzfcp5azqch3zm8pmyhc29sbbcfgnays990jvwmq9xgw8vv7m7bnc24"; + url = "https://registry.npmjs.org/globals/-/globals-11.3.0.tgz"; + sha512 = "1vlgbj6gcsd9dshs7xldhg92zd62r3w51jf9x80qnn0y4llbl2ji5sl7ibmv7ysr0iv8hzid151n8zxhyi84rlnczysjhb6v4l5qjlj"; }; }; "globals-9.18.0" = { @@ -10528,13 +10699,13 @@ let sha512 = "0phvycaq4yl6jjpyc9vwmgghfy7a6nnpynscpgpbx74zjaa5dbpl1ag0jf7jvimfk0vf6xfjqgh67xdlvi0ycgvp1kasajapjiqr5b3"; }; }; - "got-8.0.3" = { + "got-8.2.0" = { name = "got"; packageName = "got"; - version = "8.0.3"; + version = "8.2.0"; src = fetchurl { - url = "https://registry.npmjs.org/got/-/got-8.0.3.tgz"; - sha512 = "2bglci1j77rvr4z2klmnr6d2qfqk0f60nm1myj9m0g2rzh7pd68hzki9nm8f5dpaxqr98ncjbd4rfzw75j35nvsfcyb2i1l9jjailak"; + url = "https://registry.npmjs.org/got/-/got-8.2.0.tgz"; + sha512 = "01g5s6aqp4ikmpwhqvw4j7c4n4fq3v7nqaszr9kvwrx801gxzb70b3qx0pqsir2hqw2a7jfd1ja6v577hmmnblvz7c0h8spkal9s9l2"; }; }; "graceful-fs-1.2.3" = { @@ -10834,6 +11005,15 @@ let sha1 = "e8207af1cc7b30d446cc70b734b5e8be18f88d51"; }; }; + "has-flag-3.0.0" = { + name = "has-flag"; + packageName = "has-flag"; + version = "3.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/has-flag/-/has-flag-3.0.0.tgz"; + sha1 = "b5d454dc2199ae225699f3467e5a07f3b955bafd"; + }; + }; "has-gulplog-0.1.0" = { name = "has-gulplog"; packageName = "has-gulplog"; @@ -10843,13 +11023,13 @@ let sha1 = "6414c82913697da51590397dafb12f22967811ce"; }; }; - "has-symbol-support-x-1.4.1" = { + "has-symbol-support-x-1.4.2" = { name = "has-symbol-support-x"; packageName = "has-symbol-support-x"; - version = "1.4.1"; + version = "1.4.2"; src = fetchurl { - url = "https://registry.npmjs.org/has-symbol-support-x/-/has-symbol-support-x-1.4.1.tgz"; - sha512 = "0qgqbqmrlx51w4ixcln9ljr5hs2jj8fvryq7i8cg9a739p7y2c5z8wpplp9jhnfn4a3xn6li2b2npmhfm2x80khm9di3vllyyv9wii6"; + url = "https://registry.npmjs.org/has-symbol-support-x/-/has-symbol-support-x-1.4.2.tgz"; + sha512 = "0kljkjnsw7jnqm8dpf05rd7a59xjfwlbmp1qxs5kdda78zwwqfpkq5ryc2510iyam6v5vbyy0h7bpkwqadajq1ag2zaa7dymyyhwfnx"; }; }; "has-symbols-1.0.0" = { @@ -11113,13 +11293,13 @@ let sha1 = "20bb7403d3cea398e91dc4710a8ff1b8274a25ed"; }; }; - "hoek-4.2.0" = { + "hoek-4.2.1" = { name = "hoek"; packageName = "hoek"; - version = "4.2.0"; + version = "4.2.1"; src = fetchurl { - url = "https://registry.npmjs.org/hoek/-/hoek-4.2.0.tgz"; - sha512 = "2cz0q3nnv67drgaw2rm7q57r9rgdax1qa0n4z46is7db1w8vwmh574xcr0d73xl5lg80vb85xg2gdhxzh9gbllagp7xk2q228pw4idz"; + url = "https://registry.npmjs.org/hoek/-/hoek-4.2.1.tgz"; + sha512 = "1y8kprb3qldxqj31zai5n8dvhydsl9nn5w4rskhnbzzhldn6pm6n5lcyam3sfkb61a62d5m58k8im7z6ngwbd9cw9zp4zm4y7ckrf20"; }; }; "hogan.js-3.0.2" = { @@ -11293,13 +11473,13 @@ let sha1 = "29691b6fc58f4f7e81a3605dca82682b068e4430"; }; }; - "http-parser-js-0.4.9" = { + "http-parser-js-0.4.10" = { name = "http-parser-js"; packageName = "http-parser-js"; - version = "0.4.9"; + version = "0.4.10"; src = fetchurl { - url = "https://registry.npmjs.org/http-parser-js/-/http-parser-js-0.4.9.tgz"; - sha1 = "ea1a04fb64adff0242e9974f297dd4c3cad271e1"; + url = "https://registry.npmjs.org/http-parser-js/-/http-parser-js-0.4.10.tgz"; + sha1 = "92c9c1374c35085f75db359ec56cc257cbb93fa4"; }; }; "http-proxy-1.0.2" = { @@ -11464,13 +11644,13 @@ let sha1 = "fce2d6c545efc25dea1f23235182c98da0180b42"; }; }; - "hypercore-6.12.0" = { + "hypercore-6.12.2" = { name = "hypercore"; packageName = "hypercore"; - version = "6.12.0"; + version = "6.12.2"; src = fetchurl { - url = "https://registry.npmjs.org/hypercore/-/hypercore-6.12.0.tgz"; - sha512 = "00xsmbx8jcjzsibwwgknlpjvndb7zv6jdxik5skqnbizbdssvcwa2r5a7gd1cf7mpr2827067sxqqca9fmmknjnin2vvm16yb1pn5g8"; + url = "https://registry.npmjs.org/hypercore/-/hypercore-6.12.2.tgz"; + sha512 = "1s7l8r5bpiialz194g5kryp5bpcg8n0x0l7jfgynjiimi3pyn0lkcijijk20g5ibagfzi3jnrlyh1jp9ywbrys5inbwl83ra7a6qbr6"; }; }; "hypercore-protocol-6.5.2" = { @@ -11482,13 +11662,13 @@ let sha512 = "03l77nma8ga06ywa469jzqgc13hjk9bg3w2cv95g3fwnqy2fvz8qpczcih65jscvk0ira5kpm3sk2vqh2whzzvnm19jlqrzi78v80n3"; }; }; - "hyperdrive-9.12.2" = { + "hyperdrive-9.12.3" = { name = "hyperdrive"; packageName = "hyperdrive"; - version = "9.12.2"; + version = "9.12.3"; src = fetchurl { - url = "https://registry.npmjs.org/hyperdrive/-/hyperdrive-9.12.2.tgz"; - sha512 = "133iwkp8w88awfxffdjjfxl2wsrj99cdw1p2rvbv65q7mgficva14skid7vsd55r750lrvg0wbmlz0h4m44w6ypd7cvpb4hjvb2f815"; + url = "https://registry.npmjs.org/hyperdrive/-/hyperdrive-9.12.3.tgz"; + sha512 = "3w0ia766bacphqzgyjhiwbppgdja61vlz2xp6x710dk4pn6570gag3w5xa8rfivh2lvig8v2ics3bkdlm9cmq9kpzjgwzm19a089fb3"; }; }; "hyperdrive-http-4.2.2" = { @@ -11500,13 +11680,13 @@ let sha512 = "0vl2ibm38gn2xci8byg6s3qwh5zr5777hlj3l2152hm6vcfs5fn0xazxfj7vyc2wpzgacz6k1d81wcbckkvf6p6482858fh2wdxj1rn"; }; }; - "hyperdrive-network-speed-2.0.1" = { + "hyperdrive-network-speed-2.1.0" = { name = "hyperdrive-network-speed"; packageName = "hyperdrive-network-speed"; - version = "2.0.1"; + version = "2.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/hyperdrive-network-speed/-/hyperdrive-network-speed-2.0.1.tgz"; - sha1 = "40daf82e31b9d753f2ae6dfaf0818661ed24fe15"; + url = "https://registry.npmjs.org/hyperdrive-network-speed/-/hyperdrive-network-speed-2.1.0.tgz"; + sha512 = "0pvqzvgah2lm79c9gknj6cl4asrmck3f030wqagcfgbgvqh3r5q611j8s958zdw3mi0p71ny0787xqmkckxdcxrsq9am1zqgr5lz296"; }; }; "i-0.3.6" = { @@ -11590,6 +11770,15 @@ let sha1 = "be33d40ac10ef1926701f6f08a2d86fbfd1ad3e4"; }; }; + "iferr-0.1.5" = { + name = "iferr"; + packageName = "iferr"; + version = "0.1.5"; + src = fetchurl { + url = "https://registry.npmjs.org/iferr/-/iferr-0.1.5.tgz"; + sha1 = "c60eed69e6d8fdb6b3104a1fcbca1c192dc5b501"; + }; + }; "ignore-3.3.7" = { name = "ignore"; packageName = "ignore"; @@ -11932,13 +12121,13 @@ let sha1 = "96fb0a936c12babd6ff1752a17d05616abd094c6"; }; }; - "invariant-2.2.2" = { + "invariant-2.2.3" = { name = "invariant"; packageName = "invariant"; - version = "2.2.2"; + version = "2.2.3"; src = fetchurl { - url = "https://registry.npmjs.org/invariant/-/invariant-2.2.2.tgz"; - sha1 = "9e1f56ac0acdb6bf303306f338be3b204ae60360"; + url = "https://registry.npmjs.org/invariant/-/invariant-2.2.3.tgz"; + sha512 = "2s1gvqa56gnq2pkh0yy5ch3pb69dkwxr6myw9r3cc1c55xnrpiwzgc90ns4n9lij9slw0aayzm95k3x3rfrv0m7dnikq39hx0ylz7pd"; }; }; "invert-kv-1.0.0" = { @@ -11995,22 +12184,13 @@ let sha1 = "296aca878a821816e5b85d0a285a99bcff4582f0"; }; }; - "ipaddr.js-1.5.2" = { + "ipaddr.js-1.6.0" = { name = "ipaddr.js"; packageName = "ipaddr.js"; - version = "1.5.2"; + version = "1.6.0"; src = fetchurl { - url = "https://registry.npmjs.org/ipaddr.js/-/ipaddr.js-1.5.2.tgz"; - sha1 = "d4b505bde9946987ccf0fc58d9010ff9607e3fa0"; - }; - }; - "ipaddr.js-1.5.4" = { - name = "ipaddr.js"; - packageName = "ipaddr.js"; - version = "1.5.4"; - src = fetchurl { - url = "https://registry.npmjs.org/ipaddr.js/-/ipaddr.js-1.5.4.tgz"; - sha1 = "962263d9d26132956fc5c630b638a30d3cdffc14"; + url = "https://registry.npmjs.org/ipaddr.js/-/ipaddr.js-1.6.0.tgz"; + sha1 = "e3fa357b773da619f26e95f049d055c72796f86b"; }; }; "irc-replies-2.0.1" = { @@ -12247,15 +12427,6 @@ let sha1 = "2238098fc221de0bcfa5d9eac4c45d638aa1c534"; }; }; - "is-expression-2.1.0" = { - name = "is-expression"; - packageName = "is-expression"; - version = "2.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/is-expression/-/is-expression-2.1.0.tgz"; - sha1 = "91be9d47debcfef077977e9722be6dcfb4465ef0"; - }; - }; "is-expression-3.0.0" = { name = "is-expression"; packageName = "is-expression"; @@ -12382,13 +12553,22 @@ let sha1 = "0dfd98f5a9111716dd535dda6492f67bf3d25a80"; }; }; - "is-my-json-valid-2.17.1" = { + "is-my-ip-valid-1.0.0" = { + name = "is-my-ip-valid"; + packageName = "is-my-ip-valid"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/is-my-ip-valid/-/is-my-ip-valid-1.0.0.tgz"; + sha512 = "1lnwwykigbkg3yqmr61cyiplxfdvpchcsi1fz67jwn55gvdrl597jpsd6jds205gjkn8c3zxbqmppmf3danpj0rrla7ffnicmwpys42"; + }; + }; + "is-my-json-valid-2.17.2" = { name = "is-my-json-valid"; packageName = "is-my-json-valid"; - version = "2.17.1"; + version = "2.17.2"; src = fetchurl { - url = "https://registry.npmjs.org/is-my-json-valid/-/is-my-json-valid-2.17.1.tgz"; - sha512 = "2qkjhj6i3y40j35y8k722kklm1j8dfwk9506csa3vxr16vv7125v8jzpmkl551gsif98bzn205yj3sb99xi1i4bd6p5a1m81wvj2sa3"; + url = "https://registry.npmjs.org/is-my-json-valid/-/is-my-json-valid-2.17.2.tgz"; + sha512 = "29bla4943cs5dks8f307ykpgk5gihgjy158h8nspcxia85gb1lwaxpqywisr7621spdp8j5p4vd3zhfl2csdlihy06w9017b2r42610"; }; }; "is-negated-glob-1.0.0" = { @@ -12436,6 +12616,15 @@ let sha1 = "24fd6201a4782cf50561c810276afc7d12d71195"; }; }; + "is-number-4.0.0" = { + name = "is-number"; + packageName = "is-number"; + version = "4.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/is-number/-/is-number-4.0.0.tgz"; + sha512 = "20ybhnkgsrcwv730ch8qvzayjwcvs83jk2w6iim7wv3h2nn4jz8hsldn0k6ggx4xgcypwirqjb5xdacsswsk06w2nk56zr509q2aadd"; + }; + }; "is-obj-1.0.1" = { name = "is-obj"; packageName = "is-obj"; @@ -12454,13 +12643,13 @@ let sha1 = "8952688c5ec2ffd6b03ecc85e769e02903083470"; }; }; - "is-odd-1.0.0" = { + "is-odd-2.0.0" = { name = "is-odd"; packageName = "is-odd"; - version = "1.0.0"; + version = "2.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/is-odd/-/is-odd-1.0.0.tgz"; - sha1 = "3b8a932eb028b3775c39bb09e91767accdb69088"; + url = "https://registry.npmjs.org/is-odd/-/is-odd-2.0.0.tgz"; + sha512 = "34m1wg28c9l1v9bqz2klwl4ybhyqkhk80d95664jmcbq1jjpg471nv96mqgqy4838xpa8wm7mbpynmq4294pq6iw163s0ar1b3a4f1r"; }; }; "is-path-cwd-1.0.0" = { @@ -12760,13 +12949,13 @@ let sha1 = "de1aa6d63ea29dd248737b69f1ff8b8002d2108c"; }; }; - "is-windows-1.0.1" = { + "is-windows-1.0.2" = { name = "is-windows"; packageName = "is-windows"; - version = "1.0.1"; + version = "1.0.2"; src = fetchurl { - url = "https://registry.npmjs.org/is-windows/-/is-windows-1.0.1.tgz"; - sha1 = "310db70f742d259a16a369202b51af84233310d9"; + url = "https://registry.npmjs.org/is-windows/-/is-windows-1.0.2.tgz"; + sha512 = "0h9a8zw2ddl25yryp7i376iqjdvlsx4gw93sxy4067dw2yi98m3krfwd9xgi9q5w0idw9rqnyhhncr38xsppyi5izkb7ngai58bawkr"; }; }; "is-wsl-1.1.0" = { @@ -12895,15 +13084,6 @@ let sha1 = "a969a80a1fbff6b78f28776594d7bc2bdfab6aad"; }; }; - "iterate-object-1.3.2" = { - name = "iterate-object"; - packageName = "iterate-object"; - version = "1.3.2"; - src = fetchurl { - url = "https://registry.npmjs.org/iterate-object/-/iterate-object-1.3.2.tgz"; - sha1 = "24ec15affa5d0039e8839695a21c2cae1f45b66b"; - }; - }; "iterators-0.1.0" = { name = "iterators"; packageName = "iterators"; @@ -12931,13 +13111,13 @@ let sha1 = "9c80e538c12d3fb95c8d9bb9559fa0cc040405fd"; }; }; - "jaeger-client-3.7.0" = { + "jaeger-client-3.9.1" = { name = "jaeger-client"; packageName = "jaeger-client"; - version = "3.7.0"; + version = "3.9.1"; src = fetchurl { - url = "https://registry.npmjs.org/jaeger-client/-/jaeger-client-3.7.0.tgz"; - sha1 = "65ec79e33fc6aaeb5acf36064d08acf4ec47da96"; + url = "https://registry.npmjs.org/jaeger-client/-/jaeger-client-3.9.1.tgz"; + sha1 = "27a7954cf390e279ba9ad503cfed01ce171b15a1"; }; }; "jed-1.1.1" = { @@ -13048,15 +13228,6 @@ let sha512 = "0h26sq1bwxc45bm0hvlcadrbk4bizzaw729wvw690ya7mpys45bqfzdqwhjkdrnq0i44dzxckykz4bix22jfdyfg1asybg3yzczjsrv"; }; }; - "js-yaml-3.8.4" = { - name = "js-yaml"; - packageName = "js-yaml"; - version = "3.8.4"; - src = fetchurl { - url = "https://registry.npmjs.org/js-yaml/-/js-yaml-3.8.4.tgz"; - sha1 = "520b4564f86573ba96662af85a8cafa7b4b5a6f6"; - }; - }; "js2xmlparser-1.0.0" = { name = "js2xmlparser"; packageName = "js2xmlparser"; @@ -13129,6 +13300,15 @@ let sha512 = "3iwy9jwca9hg6h1k7cmcdlsygn2qzjv7w72fsrfjfpdrcyd4xc5fb11sf664rvnzrfmz24f19kvi3qawif4n63lggvpg5pv73qfrcs0"; }; }; + "json-merge-patch-0.2.3" = { + name = "json-merge-patch"; + packageName = "json-merge-patch"; + version = "0.2.3"; + src = fetchurl { + url = "https://registry.npmjs.org/json-merge-patch/-/json-merge-patch-0.2.3.tgz"; + sha1 = "fa2c6b5af87da77bae2966a589d52e23ed81fe40"; + }; + }; "json-parse-better-errors-1.0.1" = { name = "json-parse-better-errors"; packageName = "json-parse-better-errors"; @@ -13273,13 +13453,13 @@ let sha1 = "1eade7acc012034ad84e2396767ead9fa5495821"; }; }; - "jsonata-1.2.6" = { + "jsonata-1.5.0" = { name = "jsonata"; packageName = "jsonata"; - version = "1.2.6"; + version = "1.5.0"; src = fetchurl { - url = "https://registry.npmjs.org/jsonata/-/jsonata-1.2.6.tgz"; - sha512 = "3bpyhs9imacbmpq0r7l65qvkx0dfnx92qz5vm59i983h2xvw2yrr1934i979accigkr33b65n51m5zx73glbi3pwl8n6zm5b3y74a8a"; + url = "https://registry.npmjs.org/jsonata/-/jsonata-1.5.0.tgz"; + sha512 = "3qb6rsslbqqrl7gna4xl2gsjqf8z5q4imysdp2plnqyr2q43hplwga22di8qv2q9dr1jgd4pgcbsdn23qcg9adsj0ml0b99dg8r7kq5"; }; }; "jsonfile-1.0.1" = { @@ -13895,13 +14075,13 @@ let sha1 = "c076b087646f1d7dedcc3442f58800dd0a0b45f5"; }; }; - "level-post-1.0.5" = { + "level-post-1.0.7" = { name = "level-post"; packageName = "level-post"; - version = "1.0.5"; + version = "1.0.7"; src = fetchurl { - url = "https://registry.npmjs.org/level-post/-/level-post-1.0.5.tgz"; - sha1 = "2a66390409bf6a1621a444bab6f016444cc9802c"; + url = "https://registry.npmjs.org/level-post/-/level-post-1.0.7.tgz"; + sha512 = "1xwlwdkqryzw8bd0ywmjnlrcd85c88hrcf8r245377p52cwvgcrjsajg5w8zpx1d236v6043v4c3a29lcbyqmxqmh7apl9lhhdjlrix"; }; }; "level-sublevel-6.6.1" = { @@ -14210,13 +14390,13 @@ let sha1 = "bbccce6373a400fbfd0a8c67ca42f6d1ef416432"; }; }; - "lodash-4.17.4" = { + "lodash-4.17.5" = { name = "lodash"; packageName = "lodash"; - version = "4.17.4"; + version = "4.17.5"; src = fetchurl { - url = "https://registry.npmjs.org/lodash/-/lodash-4.17.4.tgz"; - sha1 = "78203a4d1c328ae1d86dca6460e369b57f4055ae"; + url = "https://registry.npmjs.org/lodash/-/lodash-4.17.5.tgz"; + sha512 = "11hikgyas884mz8a58vyixaahxbpdwljdw4cb6qp15xa3sfqikp2mm6wgv41jsl34nzsv1hkx9kw3nwczvas5p73whirmaz4sxggwmj"; }; }; "lodash-4.2.1" = { @@ -14543,13 +14723,22 @@ let sha1 = "415c4478f2bcc30120c22ce10ed3226f7d3e18e0"; }; }; - "lodash.isfunction-3.0.8" = { + "lodash.isfunction-3.0.9" = { name = "lodash.isfunction"; packageName = "lodash.isfunction"; - version = "3.0.8"; + version = "3.0.9"; src = fetchurl { - url = "https://registry.npmjs.org/lodash.isfunction/-/lodash.isfunction-3.0.8.tgz"; - sha1 = "4db709fc81bc4a8fd7127a458a5346c5cdce2c6b"; + url = "https://registry.npmjs.org/lodash.isfunction/-/lodash.isfunction-3.0.9.tgz"; + sha512 = "0ki8njk33gc8ayf2vmnx2jrfdapwckm7dx2z4zn1ik07hwgwx5zb3fsi9mlamhg6rnj1qlvfwsbg2074x19x8gq60615fbr7lvdfah2"; + }; + }; + "lodash.isplainobject-4.0.6" = { + name = "lodash.isplainobject"; + packageName = "lodash.isplainobject"; + version = "4.0.6"; + src = fetchurl { + url = "https://registry.npmjs.org/lodash.isplainobject/-/lodash.isplainobject-4.0.6.tgz"; + sha1 = "7c526a52d89b45c45cc690b88163be0497f550cb"; }; }; "lodash.isstring-4.0.1" = { @@ -14588,22 +14777,22 @@ let sha1 = "2dcbd2c287cbc0a55cc42328bd0c736150d53e3f"; }; }; - "lodash.merge-4.6.0" = { + "lodash.merge-4.6.1" = { name = "lodash.merge"; packageName = "lodash.merge"; - version = "4.6.0"; + version = "4.6.1"; src = fetchurl { - url = "https://registry.npmjs.org/lodash.merge/-/lodash.merge-4.6.0.tgz"; - sha1 = "69884ba144ac33fe699737a6086deffadd0f89c5"; + url = "https://registry.npmjs.org/lodash.merge/-/lodash.merge-4.6.1.tgz"; + sha512 = "0lv358i7xyg1hn90fk3xzih5kmj1zlmr759g0hh9fa7npbik629q8h5jd2lvjnrm76ciz92k0yn5z6vcqdbgws1zzsrqzw7ixmk7rh0"; }; }; - "lodash.mergewith-4.6.0" = { + "lodash.mergewith-4.6.1" = { name = "lodash.mergewith"; packageName = "lodash.mergewith"; - version = "4.6.0"; + version = "4.6.1"; src = fetchurl { - url = "https://registry.npmjs.org/lodash.mergewith/-/lodash.mergewith-4.6.0.tgz"; - sha1 = "150cf0a16791f5903b8891eab154609274bdea55"; + url = "https://registry.npmjs.org/lodash.mergewith/-/lodash.mergewith-4.6.1.tgz"; + sha512 = "1swsfrcjr7yv5bkxi47mfjyrl5c8d2c8s4m01qpnffgnjnl9mbri6i9ys9gvwq0drsqszzrmq0rlglmc6c17h8a0r22n86qwfpkjv3r"; }; }; "lodash.once-4.1.1" = { @@ -14786,13 +14975,13 @@ let sha1 = "88328fd7d1ce7938b29283746f0b1bc126b24708"; }; }; - "log4js-2.5.2" = { + "log4js-2.5.3" = { name = "log4js"; packageName = "log4js"; - version = "2.5.2"; + version = "2.5.3"; src = fetchurl { - url = "https://registry.npmjs.org/log4js/-/log4js-2.5.2.tgz"; - sha512 = "3cr4zy75cf74ajn55xnidbz0m4848yyjyc2zrhlyksjdi0hsp0skwkq8ipgpahwfz1b7zlr9zg1blapz0nsn3h8kmz5w2cz036n2rij"; + url = "https://registry.npmjs.org/log4js/-/log4js-2.5.3.tgz"; + sha512 = "29zsw029b55hq8a7c5hrqwf4ka97sai18wn4vpxhzgg61jisclhcxlfm4m219iz3j3kqfkyb3k76dmwvqm2ivk6b4iavd2q7jjymgv0"; }; }; "loggly-1.1.1" = { @@ -14804,13 +14993,13 @@ let sha1 = "0a0fc1d3fa3a5ec44fdc7b897beba2a4695cebee"; }; }; - "lokijs-1.5.1" = { + "lokijs-1.5.2" = { name = "lokijs"; packageName = "lokijs"; - version = "1.5.1"; + version = "1.5.2"; src = fetchurl { - url = "https://registry.npmjs.org/lokijs/-/lokijs-1.5.1.tgz"; - sha512 = "1pi08ry0a4zvg7mqj14gl0vacka95k77bbvljmcf25whxxbkh2rprsxpd8pv6frqh4ix6vslk44silx83sk65xhaw7ia2zssf0vngiy"; + url = "https://registry.npmjs.org/lokijs/-/lokijs-1.5.2.tgz"; + sha1 = "75d43df21232f1d5479d191a69b6ebf61754a873"; }; }; "long-2.4.0" = { @@ -14939,15 +15128,6 @@ let sha1 = "ec2bba603f4c5bb3e7a1bf62ce1c1dbc1d474e08"; }; }; - "lru-cache-2.2.4" = { - name = "lru-cache"; - packageName = "lru-cache"; - version = "2.2.4"; - src = fetchurl { - url = "https://registry.npmjs.org/lru-cache/-/lru-cache-2.2.4.tgz"; - sha1 = "6c658619becf14031d0d0b594b16042ce4dc063d"; - }; - }; "lru-cache-2.5.2" = { name = "lru-cache"; packageName = "lru-cache"; @@ -15119,22 +15299,22 @@ let sha1 = "03c486039bdf4df6cd3b6adcaaac4107dfdbc068"; }; }; - "make-dir-1.1.0" = { + "make-dir-1.2.0" = { name = "make-dir"; packageName = "make-dir"; - version = "1.1.0"; + version = "1.2.0"; src = fetchurl { - url = "https://registry.npmjs.org/make-dir/-/make-dir-1.1.0.tgz"; - sha512 = "1q7686aqgkxk9l6nqhzbil3599f9pxiz364kdbfy7pdr9sny7zylpm6yf4rwz4i0aa11lmf35mh8jmj7g7vxm37pvqvl9qbij5jxyfh"; + url = "https://registry.npmjs.org/make-dir/-/make-dir-1.2.0.tgz"; + sha512 = "0ivb7kryzyklvicp8a0lsq56pzjmvycb6bs4d0239q9ygcrs8ylx94q57fgxq3vqvzzs9v3ldl5m1jkxfvfaxh5p8lgb0qchmmh1mb8"; }; }; - "make-error-1.3.2" = { + "make-error-1.3.4" = { name = "make-error"; packageName = "make-error"; - version = "1.3.2"; + version = "1.3.4"; src = fetchurl { - url = "https://registry.npmjs.org/make-error/-/make-error-1.3.2.tgz"; - sha512 = "1sw30dxbwvv9pa0871cyshryjqam7d0pl4m1f6zww2r81qv3sgmx5qz7aimhz2xhxlihy9fglnwc1sy7hwfbfwcvg2n4mbrk7gxmnlp"; + url = "https://registry.npmjs.org/make-error/-/make-error-1.3.4.tgz"; + sha512 = "3m1bilfa38sjf09x439iz2050vhi5790qcxx11nwr51wygfiazbghxbaqznmhamij5vh6zv83s7kgjx0va77996dmighm2apgjrndnh"; }; }; "make-error-cause-1.2.2" = { @@ -15173,6 +15353,15 @@ let sha1 = "d933ceb9205d82bdcf4886f6742bdc2b4dea146d"; }; }; + "map-obj-2.0.0" = { + name = "map-obj"; + packageName = "map-obj"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/map-obj/-/map-obj-2.0.0.tgz"; + sha1 = "a65cd29087a92598b8791257a523e021222ac1f9"; + }; + }; "map-stream-0.1.0" = { name = "map-stream"; packageName = "map-stream"; @@ -15200,13 +15389,13 @@ let sha1 = "3df373dbea587a9a7fef3e56311b68908f75c414"; }; }; - "markdown-it-8.4.0" = { + "markdown-it-8.4.1" = { name = "markdown-it"; packageName = "markdown-it"; - version = "8.4.0"; + version = "8.4.1"; src = fetchurl { - url = "https://registry.npmjs.org/markdown-it/-/markdown-it-8.4.0.tgz"; - sha512 = "0c0jpdfbi4fmqyjc2ilwvinxyc8rn4p9j7fwshh2c00nkc0q2lh6yw2dgragvnpy8bjhcwa1hlfy2ih2ih3np78wrpqx7gf4w48xnxl"; + url = "https://registry.npmjs.org/markdown-it/-/markdown-it-8.4.1.tgz"; + sha512 = "3w1l75fip7divhr6q8n1sf0af49ssf9kc4vh8gha0svw5q84c8s8csr0f50qz7n0smx1a8iwfnlj2kbnl9bwmpryqgia5b44d4ylg0b"; }; }; "markdown-it-emoji-1.4.0" = { @@ -15218,13 +15407,13 @@ let sha1 = "9bee0e9a990a963ba96df6980c4fddb05dfb4dcc"; }; }; - "markdown-it-github-headings-1.1.0" = { + "markdown-it-github-headings-1.1.1" = { name = "markdown-it-github-headings"; packageName = "markdown-it-github-headings"; - version = "1.1.0"; + version = "1.1.1"; src = fetchurl { - url = "https://registry.npmjs.org/markdown-it-github-headings/-/markdown-it-github-headings-1.1.0.tgz"; - sha1 = "d6f73da5276ded956861337189addf3d52b93558"; + url = "https://registry.npmjs.org/markdown-it-github-headings/-/markdown-it-github-headings-1.1.1.tgz"; + sha512 = "3cs9xbmjc64jh19ashy00z2hig9q9mvcvnqdm8hkysiidr3fl17zkhypvb5z7dqvklwyycah9s325vwj4gbwr214xc7hrddb2cn2jwc"; }; }; "markdown-it-task-checkbox-1.0.6" = { @@ -15254,13 +15443,13 @@ let sha1 = "0e2cba81390b0549a9153ec3b0d915b61c164be7"; }; }; - "marked-0.3.12" = { + "marked-0.3.17" = { name = "marked"; packageName = "marked"; - version = "0.3.12"; + version = "0.3.17"; src = fetchurl { - url = "https://registry.npmjs.org/marked/-/marked-0.3.12.tgz"; - sha512 = "2h8qj30y9n29m3xvbbg777kmxcdx57hf1ir6z3jyn94gj7s0kcz74203y1hazavwh60cfp69zdjv532vxyjc853kx82pvyjxddmm0wk"; + url = "https://registry.npmjs.org/marked/-/marked-0.3.17.tgz"; + sha512 = "2cw4hwy4hyxspppby5ww0sljhyg0nhlgy0aamqvf7nrhg4vyrgyp8ah52pz99rr8pvsjk3h9z9q8fhrlqaixw5kgk2si5yrr0v9n0pq"; }; }; "matcher-collection-1.0.5" = { @@ -15398,6 +15587,15 @@ let sha1 = "72cb668b425228290abbfa856892587308a801fb"; }; }; + "meow-4.0.0" = { + name = "meow"; + packageName = "meow"; + version = "4.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/meow/-/meow-4.0.0.tgz"; + sha512 = "2rvzq4615rj5x6za96as8f2xx6zs8m8lzraql20fiv5kr03dm9cy3zqq93ccryl42j9mp2n846pmdpkkh79i15962pnxrppbmxf9vri"; + }; + }; "merge-1.2.0" = { name = "merge"; packageName = "merge"; @@ -15542,13 +15740,13 @@ let sha1 = "86677c97d1720b363431d04d0d15293bd38c1565"; }; }; - "micromatch-3.1.5" = { + "micromatch-3.1.9" = { name = "micromatch"; packageName = "micromatch"; - version = "3.1.5"; + version = "3.1.9"; src = fetchurl { - url = "https://registry.npmjs.org/micromatch/-/micromatch-3.1.5.tgz"; - sha512 = "2y22i8yrib7vcgpfcm5sq9g4fh4wxrn0f3z017vdbkvybvywa1axl3kym81k9ad6h3d4jmqkqyahcaj2c5qy5wpa17kvbyhnfn6sjya"; + url = "https://registry.npmjs.org/micromatch/-/micromatch-3.1.9.tgz"; + sha512 = "3vfciram7xbwcwvhii8960vnvf3jczn092sfbfgx1vivk3scvkm9znjnbq2ppywg9h8i86d8vq3ha4c9a3jllaian0gcl7rrgm36lja"; }; }; "miller-rabin-4.0.1" = { @@ -15623,22 +15821,13 @@ let sha1 = "3d0c63180f458eb10d325aaa37d7c58ae312e9d7"; }; }; - "mime-db-1.30.0" = { + "mime-db-1.33.0" = { name = "mime-db"; packageName = "mime-db"; - version = "1.30.0"; + version = "1.33.0"; src = fetchurl { - url = "https://registry.npmjs.org/mime-db/-/mime-db-1.30.0.tgz"; - sha1 = "74c643da2dd9d6a45399963465b26d5ca7d71f01"; - }; - }; - "mime-db-1.32.0" = { - name = "mime-db"; - packageName = "mime-db"; - version = "1.32.0"; - src = fetchurl { - url = "https://registry.npmjs.org/mime-db/-/mime-db-1.32.0.tgz"; - sha512 = "1bl21q8acya2jj67757518bdy1yhc5d7ybn755wnikwcca3gq5akfg835nj5mp2kmd4f97yyy0qwx662jlwk1rgx7nl9qsd2vzsi5gr"; + url = "https://registry.npmjs.org/mime-db/-/mime-db-1.33.0.tgz"; + sha512 = "36xnw59ik9fqym00cmwb5nyzg0l03k70cp413f7639j93wgmzk1mh0xjc7i6zz3r6k9xnwh0g5cm5a1f3y8c6plgy4qld7fm887ywh4"; }; }; "mime-types-2.0.14" = { @@ -15650,13 +15839,13 @@ let sha1 = "310e159db23e077f8bb22b748dabfa4957140aa6"; }; }; - "mime-types-2.1.17" = { + "mime-types-2.1.18" = { name = "mime-types"; packageName = "mime-types"; - version = "2.1.17"; + version = "2.1.18"; src = fetchurl { - url = "https://registry.npmjs.org/mime-types/-/mime-types-2.1.17.tgz"; - sha1 = "09d7a393f03e995a79f8af857b70a9e0ab16557a"; + url = "https://registry.npmjs.org/mime-types/-/mime-types-2.1.18.tgz"; + sha512 = "22krj1kw7n9z10zdyx7smcaim4bzwqsqzhspwha06q58gcrxfp93hw2cd0vk5crhq5p2dwzqlpacg32lrmp5sjzb798zdzy35mdmkwm"; }; }; "mimelib-0.3.1" = { @@ -15668,13 +15857,13 @@ let sha1 = "787add2415d827acb3af6ec4bca1ea9596418853"; }; }; - "mimic-fn-1.1.0" = { + "mimic-fn-1.2.0" = { name = "mimic-fn"; packageName = "mimic-fn"; - version = "1.1.0"; + version = "1.2.0"; src = fetchurl { - url = "https://registry.npmjs.org/mimic-fn/-/mimic-fn-1.1.0.tgz"; - sha1 = "e667783d92e89dbd342818b5230b9d62a672ad18"; + url = "https://registry.npmjs.org/mimic-fn/-/mimic-fn-1.2.0.tgz"; + sha512 = "1clrrqw75rmpkw0x53axy8va2hq2gzynz9zb58m0xv1nh3lg81cv4dfdy7pk9vrlb9ydwmj6klpicwkv2bjx3m8aj4fi2ph3jxkizwd"; }; }; "mimic-response-1.0.0" = { @@ -15758,15 +15947,6 @@ let sha1 = "8d087c39c6b38c001b97fca7ce6d0e1e80afbac7"; }; }; - "minimatch-3.0.2" = { - name = "minimatch"; - packageName = "minimatch"; - version = "3.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/minimatch/-/minimatch-3.0.2.tgz"; - sha1 = "0f398a7300ea441e9c348c83d98ab8c9dbf9c40a"; - }; - }; "minimatch-3.0.4" = { name = "minimatch"; packageName = "minimatch"; @@ -15821,6 +16001,15 @@ let sha1 = "a35008b20f41383eec1fb914f4cd5df79a264284"; }; }; + "minimist-options-3.0.2" = { + name = "minimist-options"; + packageName = "minimist-options"; + version = "3.0.2"; + src = fetchurl { + url = "https://registry.npmjs.org/minimist-options/-/minimist-options-3.0.2.tgz"; + sha512 = "1slngp5z9rczjirv9lpdwiv1ap4xmp28jxl4r0i5hpds1khlm89qp70ziz8k5h2vwjph6srjqi3gb2yrwwsnnwli6p8yxvlyx7nn80p"; + }; + }; "minipass-2.2.1" = { name = "minipass"; packageName = "minipass"; @@ -15848,13 +16037,22 @@ let sha1 = "1ad3b777b39e403cc27bf52086c23e41ef4c9604"; }; }; - "mixin-deep-1.3.0" = { + "mississippi-2.0.0" = { + name = "mississippi"; + packageName = "mississippi"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/mississippi/-/mississippi-2.0.0.tgz"; + sha512 = "2gnigixsj38hrqchkf6k8wqywihq6l14pg0qb23x3qpjn56vybljv3nz1z7cbzhl952h1xfw28vsqm09pjhpv9zs9sm43rdxazkqync"; + }; + }; + "mixin-deep-1.3.1" = { name = "mixin-deep"; packageName = "mixin-deep"; - version = "1.3.0"; + version = "1.3.1"; src = fetchurl { - url = "https://registry.npmjs.org/mixin-deep/-/mixin-deep-1.3.0.tgz"; - sha512 = "016isy937hd503fn41ivc4j267cr1brp7f65waxkk2ijslc1gyh7r815xk4g27cjrgjzydwqbpwk5yj4nyjj085n3l5k2vsi2z841kn"; + url = "https://registry.npmjs.org/mixin-deep/-/mixin-deep-1.3.1.tgz"; + sha512 = "0swcxf279pl5jc4b3d4fm9whbi6sbv2xbcfm1fkxiz793qa2hl5wd1b8dw019dgyidx5nwpa141k0cvvwan0rfypn2am0c4fwn2v4pi"; }; }; "mixin-object-2.0.1" = { @@ -15956,13 +16154,13 @@ let sha1 = "23215833f1da13fd606ccb8087b44852dcb821fd"; }; }; - "module-deps-5.0.1" = { + "module-deps-6.0.0" = { name = "module-deps"; packageName = "module-deps"; - version = "5.0.1"; + version = "6.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/module-deps/-/module-deps-5.0.1.tgz"; - sha512 = "0jc7ysgbhwbj17j14vcl7aa6pn7pcp5bas2d5lb53rq3l7xkcxgvjqgrc9l4xvdhy2sdwyj1s9nssn7fhwhrdb841wycbxz37z2la5j"; + url = "https://registry.npmjs.org/module-deps/-/module-deps-6.0.0.tgz"; + sha512 = "0ri32x2v7ywi8n4h92scc5pq6zlh7mmzbmk0gh2gsh3490w4d9islz1rs0in98cl2h5fl0dfx2dfcad0disnaiqflw46d24ja20raq4"; }; }; "moment-2.1.0" = { @@ -15992,15 +16190,6 @@ let sha1 = "f38f2c97c9889b0ee18fc6cc392e1e443ad2da8e"; }; }; - "moment-2.18.1" = { - name = "moment"; - packageName = "moment"; - version = "2.18.1"; - src = fetchurl { - url = "https://registry.npmjs.org/moment/-/moment-2.18.1.tgz"; - sha1 = "c36193dd3ce1c2eed2adb7c802dbbc77a81b1c0f"; - }; - }; "moment-2.20.1" = { name = "moment"; packageName = "moment"; @@ -16082,6 +16271,15 @@ let sha1 = "d01fa6c65859b76fcf31b3cb53a3821a311d8051"; }; }; + "move-concurrently-1.0.1" = { + name = "move-concurrently"; + packageName = "move-concurrently"; + version = "1.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/move-concurrently/-/move-concurrently-1.0.1.tgz"; + sha1 = "be2c005fda32e0b29af1f05d7c4b33214c701f92"; + }; + }; "mpath-0.1.1" = { name = "mpath"; packageName = "mpath"; @@ -16100,22 +16298,22 @@ let sha1 = "fbbdc28cb0207e49b8a4eb1a4c0cea6c2de794c8"; }; }; - "mqtt-2.9.0" = { + "mqtt-2.15.1" = { name = "mqtt"; packageName = "mqtt"; - version = "2.9.0"; + version = "2.15.1"; src = fetchurl { - url = "https://registry.npmjs.org/mqtt/-/mqtt-2.9.0.tgz"; - sha512 = "181qi8xb0lxxqvwq2xcslv35dbhphyr67w02bad6n4rlibcm6z0j055dyfpdh12mrrvgjzfj11cjylsj26y7vr17cvk1kbgkiqgzpb9"; + url = "https://registry.npmjs.org/mqtt/-/mqtt-2.15.1.tgz"; + sha512 = "13ycishr81p39yimwf97c4p9pwhg8a0k2hfmfhkcrpy4yshilfb9rr197fr0r27kniqnbzcfsa19pyvgnkrq24zb4kdiafgrw8kbif1"; }; }; - "mqtt-packet-5.4.0" = { + "mqtt-packet-5.5.0" = { name = "mqtt-packet"; packageName = "mqtt-packet"; - version = "5.4.0"; + version = "5.5.0"; src = fetchurl { - url = "https://registry.npmjs.org/mqtt-packet/-/mqtt-packet-5.4.0.tgz"; - sha512 = "2d1hvibps8d4xlw8wm937ykc76yb02rp2065hd6186vygjx3wixjjzrn3fia4wfj7d38ic8gh5ij5rsi9389kl6gpxxjbdcbjwpn8yf"; + url = "https://registry.npmjs.org/mqtt-packet/-/mqtt-packet-5.5.0.tgz"; + sha512 = "3wbymw2jfhqw0z4zcasxy5njy5ynwrbfq1vkrb2pwwx28mkrywlj2mq4bykrgjgq09v6a5carizhcl6h1kbcvmn902kbbpxxb1r87wi"; }; }; "mri-1.1.0" = { @@ -16199,13 +16397,13 @@ let sha1 = "400515e05b1924889cb61a1ec6054290a68e1207"; }; }; - "ms-rest-2.3.0" = { + "ms-rest-2.3.1" = { name = "ms-rest"; packageName = "ms-rest"; - version = "2.3.0"; + version = "2.3.1"; src = fetchurl { - url = "https://registry.npmjs.org/ms-rest/-/ms-rest-2.3.0.tgz"; - sha512 = "2dfmfxr3xagmds2agz7g6rnj1s9lh29fgfwxbqsfpkkabh3qhcc7sznkaviilpzr59fks1401wy6sh9xyy3wsaqbm975vm5b2bj6cwf"; + url = "https://registry.npmjs.org/ms-rest/-/ms-rest-2.3.1.tgz"; + sha512 = "34xikyld48lq65i6ngn4wf8gsnn2lllbd7fray2rsxihkz6azm7zsqs2fm9ng566fdy6mf6qj41lvvyl2xih7d5a074rkhxpwdf1w1m"; }; }; "ms-rest-azure-1.15.7" = { @@ -16217,13 +16415,13 @@ let sha1 = "8bce09f053b1565dbaa8bd022ca40155c35b0fde"; }; }; - "ms-rest-azure-2.5.0" = { + "ms-rest-azure-2.5.4" = { name = "ms-rest-azure"; packageName = "ms-rest-azure"; - version = "2.5.0"; + version = "2.5.4"; src = fetchurl { - url = "https://registry.npmjs.org/ms-rest-azure/-/ms-rest-azure-2.5.0.tgz"; - sha512 = "22v7h9wa04laz1v40rq0wx3az880flfhz6xzjgk5pny3674kar5c0vj0ww1rjbsi891j9hvxvk9v51dykivirfjh5srqrjfmswzk3fw"; + url = "https://registry.npmjs.org/ms-rest-azure/-/ms-rest-azure-2.5.4.tgz"; + sha512 = "049vfg1l6jfzdn82m5shchi6zzlfk81csihlalwj1mm96j0dykbx885sbjyv3wr0iqwjwzp4i1x2kv750xvzvyljfqrlnh1kfhrq32b"; }; }; "msgpack-1.0.2" = { @@ -16271,13 +16469,13 @@ let sha1 = "abf022fc866727055a9e0c2bc98097f5ebad97a2"; }; }; - "multicast-dns-6.2.2" = { + "multicast-dns-6.2.3" = { name = "multicast-dns"; packageName = "multicast-dns"; - version = "6.2.2"; + version = "6.2.3"; src = fetchurl { - url = "https://registry.npmjs.org/multicast-dns/-/multicast-dns-6.2.2.tgz"; - sha512 = "06b9ps5a1ymag21szz55z4xzs2ncp0frcqsaldnggmz0m5ijhjv8f553cpkp9zkm37av1pm2y8pn70jbfzk888n1hap6i321babhcy5"; + url = "https://registry.npmjs.org/multicast-dns/-/multicast-dns-6.2.3.tgz"; + sha512 = "3m42kr8y2s1krl4gzb5xsa9v3h01xalvrgdkj99gyfaq7761asmj5m6kzm70mxb22125gia12g7rmarnzmh09403j8j2cyvx7jqjblf"; }; }; "multicast-dns-service-types-1.1.0" = { @@ -16505,13 +16703,13 @@ let sha1 = "e4ff34e6c95fdfb5aecc08de6596f43605a7db45"; }; }; - "nan-2.8.0" = { + "nan-2.9.2" = { name = "nan"; packageName = "nan"; - version = "2.8.0"; + version = "2.9.2"; src = fetchurl { - url = "https://registry.npmjs.org/nan/-/nan-2.8.0.tgz"; - sha1 = "ed715f3fe9de02b57a5e6252d90a96675e1f085a"; + url = "https://registry.npmjs.org/nan/-/nan-2.9.2.tgz"; + sha512 = "1iwlv98jbkr46c7hy28crk2m89jiskrp4qfa5ysyacyq8dkbk4hii3cc61irf39b7n6wd9cjlaasmakv9dsknqhb3876zrvrbjvmmcn"; }; }; "nanoassert-1.1.0" = { @@ -16532,22 +16730,22 @@ let sha1 = "bce5d5d435a5362c7dad7f9e90cd21959589be86"; }; }; - "nanoid-1.0.1" = { + "nanoid-1.0.2" = { name = "nanoid"; packageName = "nanoid"; - version = "1.0.1"; + version = "1.0.2"; src = fetchurl { - url = "https://registry.npmjs.org/nanoid/-/nanoid-1.0.1.tgz"; - sha512 = "3dh8fdgynnii8rgdpyk69z99y49bnl60244wsaw8mk2lzhfhczgf7nxgmm0qakmgzbvqqqfngq03z3j8hp70smh7ka0il806w7ajxh5"; + url = "https://registry.npmjs.org/nanoid/-/nanoid-1.0.2.tgz"; + sha512 = "2bzl500sgpk3i3ird4iviglsj0gj9a0qhmj4hnky3xmxbl4ahamjhi96rslr8k65j77glmw771m3jm7r5sr5akw6ip5glmxvqkg095h"; }; }; - "nanomatch-1.2.7" = { + "nanomatch-1.2.9" = { name = "nanomatch"; packageName = "nanomatch"; - version = "1.2.7"; + version = "1.2.9"; src = fetchurl { - url = "https://registry.npmjs.org/nanomatch/-/nanomatch-1.2.7.tgz"; - sha512 = "2m4xaq739s2r5bvh287d8zm8af9mxa706z1a7ila48yhvkspi4iimwyg0id1cl327i7kqssrcnc2nwdc2qw8s83xwqg3bmfgjr5v6gz"; + url = "https://registry.npmjs.org/nanomatch/-/nanomatch-1.2.9.tgz"; + sha512 = "1f2indb6hj1h79gxklk6ac2lhfjfydw5ak3v2nwilwir5hqvz9l9kxf63l8k1blsjq4v7r2pf0gqc1b55sqqym5bn9afhrj5xnpvi4z"; }; }; "nanotiming-1.0.1" = { @@ -16743,13 +16941,13 @@ let sha1 = "02a71b008eaf7d55ae89fb9fd7685b7b88d7bc29"; }; }; - "needle-2.1.1" = { + "needle-2.2.0" = { name = "needle"; packageName = "needle"; - version = "2.1.1"; + version = "2.2.0"; src = fetchurl { - url = "https://registry.npmjs.org/needle/-/needle-2.1.1.tgz"; - sha1 = "f3d501d633e661d34cd9648ca6c42f782a44d071"; + url = "https://registry.npmjs.org/needle/-/needle-2.2.0.tgz"; + sha512 = "3ry4wyih9w3nc3d319bmfd9l4jj8fn00lqfs1d00sfy6azvy66yhm6jv411cn1c1zqc01hvj59dlavm82mzxw5mlar8ck9ylz5s0mkq"; }; }; "negotiator-0.3.0" = { @@ -16789,6 +16987,15 @@ let sha256 = "243e90fbf6616ef39f3c71bbcd027799e35cbf2ef3f25203676f65b20f7f7394"; }; }; + "neo-async-2.5.0" = { + name = "neo-async"; + packageName = "neo-async"; + version = "2.5.0"; + src = fetchurl { + url = "https://registry.npmjs.org/neo-async/-/neo-async-2.5.0.tgz"; + sha512 = "3mgwi8gsgy9lazh0qbpaz8f2l8gvvpn3jp0ghc6xnn0xq0ajdmzp7lfklby1n4s67fy1w5g5gzizyqzds8l3fqsj76cy0mq06rr56cw"; + }; + }; "nested-error-stacks-1.0.2" = { name = "nested-error-stacks"; packageName = "nested-error-stacks"; @@ -16888,13 +17095,13 @@ let sha512 = "34msnfifpdmxl414b8rch1p1six59jd9251b7wkb37n78fa84xfa5f5f5cxxp477wb846nfrsg6b1py3rahz4xdpk17lzzy9kvdjr5f"; }; }; - "node-abi-2.1.2" = { + "node-abi-2.3.0" = { name = "node-abi"; packageName = "node-abi"; - version = "2.1.2"; + version = "2.3.0"; src = fetchurl { - url = "https://registry.npmjs.org/node-abi/-/node-abi-2.1.2.tgz"; - sha512 = "1sd6l8zqa18mlzackwy8vns51zjp8xyrd97nc514b0yvndd0y0wsyx2q9h8zr0k9kra5ys1yq75ggkv5av69cyzxji19rdvr5pjsrc6"; + url = "https://registry.npmjs.org/node-abi/-/node-abi-2.3.0.tgz"; + sha512 = "2ijjyzh7bcyyhjaa5m0kdfg6hvxkq6czwxfg6y5d2nl6v7m9qab2ixwgvzbaaivn0r0ig48j4443905167vnpzgvlq5icfj9nyvl2fg"; }; }; "node-alias-1.0.4" = { @@ -16960,13 +17167,13 @@ let sha1 = "f03cf65ebd5d4d9dd2f7becb57ceaf78ed94a2bf"; }; }; - "node-forge-0.7.1" = { + "node-forge-0.7.2" = { name = "node-forge"; packageName = "node-forge"; - version = "0.7.1"; + version = "0.7.2"; src = fetchurl { - url = "https://registry.npmjs.org/node-forge/-/node-forge-0.7.1.tgz"; - sha1 = "9da611ea08982f4b94206b3beb4cc9665f20c300"; + url = "https://registry.npmjs.org/node-forge/-/node-forge-0.7.2.tgz"; + sha512 = "2kc6a8y2fmpsmiddh9vkiy32kg6isg3igpfgpkvvkw48y5x2n3wwrxsi7zcjyxf2yakjygvim3gy74c077lrc0cm60f388diw2nhc2x"; }; }; "node-gyp-build-3.2.2" = { @@ -17050,13 +17257,13 @@ let sha1 = "56cf6f69bc6d23557f8627ee63b74c1caa85c65b"; }; }; - "node-red-node-rbe-0.1.14" = { + "node-red-node-rbe-0.2.1" = { name = "node-red-node-rbe"; packageName = "node-red-node-rbe"; - version = "0.1.14"; + version = "0.2.1"; src = fetchurl { - url = "https://registry.npmjs.org/node-red-node-rbe/-/node-red-node-rbe-0.1.14.tgz"; - sha512 = "2xixj71payi14frjkb30lhnripprfcxzqaa9cbwh7w21s426y452ns0vpaycnbsbfwfcn5gcs4b2fjh0b6rxnbasd9hijqf6h3v26wa"; + url = "https://registry.npmjs.org/node-red-node-rbe/-/node-red-node-rbe-0.2.1.tgz"; + sha512 = "3s12a0r8a6nzfqk1a1v1k5drczf4qpnia460l3rq4bixnl0k0fahc1hh4cqcw9rlzc59cz3p4dv19ixrwf2wc6nxixsyqz417li68wb"; }; }; "node-red-node-twitter-0.1.12" = { @@ -17410,15 +17617,6 @@ let sha1 = "8f338189d32769267886a07ad7b7fd2267446adf"; }; }; - "npm-registry-client-8.4.0" = { - name = "npm-registry-client"; - packageName = "npm-registry-client"; - version = "8.4.0"; - src = fetchurl { - url = "https://registry.npmjs.org/npm-registry-client/-/npm-registry-client-8.4.0.tgz"; - sha512 = "20ka7w1mdgrazm20d5jihqam7gpiz0rnm2r6i91ax11mq96zn81ywwmmy3jr3yjddrc1bzcljxbs86wlwwrrzsgki2igj95mnm5ylrx"; - }; - }; "npm-registry-client-8.5.0" = { name = "npm-registry-client"; packageName = "npm-registry-client"; @@ -17591,13 +17789,13 @@ let sha1 = "46a6ab7f0aead8deae9ec0565780b7d4efeb9d43"; }; }; - "oauth2orize-1.8.0" = { + "oauth2orize-1.11.0" = { name = "oauth2orize"; packageName = "oauth2orize"; - version = "1.8.0"; + version = "1.11.0"; src = fetchurl { - url = "https://registry.npmjs.org/oauth2orize/-/oauth2orize-1.8.0.tgz"; - sha1 = "f2ddc0115d635d0480746249c00f0ea1a9c51ba8"; + url = "https://registry.npmjs.org/oauth2orize/-/oauth2orize-1.11.0.tgz"; + sha1 = "793cef251d45ebdeac32ae40a8b6814faab1d483"; }; }; "object-assign-1.0.0" = { @@ -17942,15 +18140,6 @@ let sha1 = "7abc22e644dff63b0a96d5ab7f2790c0f01abc95"; }; }; - "opn-5.1.0" = { - name = "opn"; - packageName = "opn"; - version = "5.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/opn/-/opn-5.1.0.tgz"; - sha512 = "2k8g3x11xbm64r7bbyad08cjv27vaparkigq11w2v8kg8h73k2rzdr3q6f5i2klidgpaq9rbhfv45rf9dkqqv3d8vsbvw4c5knnbww8"; - }; - }; "opn-5.2.0" = { name = "opn"; packageName = "opn"; @@ -18032,13 +18221,13 @@ let sha1 = "75e75a96506611eb1c65ba89018ff08a981e2c16"; }; }; - "ora-1.3.0" = { + "ora-1.4.0" = { name = "ora"; packageName = "ora"; - version = "1.3.0"; + version = "1.4.0"; src = fetchurl { - url = "https://registry.npmjs.org/ora/-/ora-1.3.0.tgz"; - sha1 = "80078dd2b92a934af66a3ad72a5b910694ede51a"; + url = "https://registry.npmjs.org/ora/-/ora-1.4.0.tgz"; + sha512 = "2kz616isg6vqp95rsja7fc47k22qipv9b44dhsyxsl7x95ly9j17dwn8dxq8adyhw6ap1nlpfg2dk8v6r7b2m8r61v3ikriwh6bbhl8"; }; }; "orchestrator-0.3.8" = { @@ -18167,13 +18356,13 @@ let sha1 = "cd6ad8ddb290915ad9e22765576025d411f29cb6"; }; }; - "osenv-0.1.4" = { + "osenv-0.1.5" = { name = "osenv"; packageName = "osenv"; - version = "0.1.4"; + version = "0.1.5"; src = fetchurl { - url = "https://registry.npmjs.org/osenv/-/osenv-0.1.4.tgz"; - sha1 = "42fe6d5953df06c8064be6f176c3d05aaaa34644"; + url = "https://registry.npmjs.org/osenv/-/osenv-0.1.5.tgz"; + sha512 = "3ddw0y41pxv08ls5xhmq1bi81hppjbr45k78cjfx99vznh5znrj5g1b1wab9caj1mqlsvmfms0zm9cfb47ygm0d8wv5fccx8049q9fh"; }; }; "osx-release-1.1.0" = { @@ -18356,6 +18545,15 @@ let sha512 = "1r9hy37qsbhv5ipsydkbir2yl7qg3lbpgj4qzrnb903w8mhj9ibaww0zykbp0ak1nxxp6mpbws3xsrf7fgq39zchci90c7chgqvh1wm"; }; }; + "parallel-transform-1.1.0" = { + name = "parallel-transform"; + packageName = "parallel-transform"; + version = "1.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/parallel-transform/-/parallel-transform-1.1.0.tgz"; + sha1 = "d410f065b05da23081fcd10f28854c29bda33b06"; + }; + }; "param-case-2.1.1" = { name = "param-case"; packageName = "param-case"; @@ -18599,15 +18797,6 @@ let sha1 = "b363e55e8006ca6fe21784d2db22bd15d7917f14"; }; }; - "passport-0.3.2" = { - name = "passport"; - packageName = "passport"; - version = "0.3.2"; - src = fetchurl { - url = "https://registry.npmjs.org/passport/-/passport-0.3.2.tgz"; - sha1 = "9dd009f915e8fe095b0124a01b8f82da07510102"; - }; - }; "passport-0.4.0" = { name = "passport"; packageName = "passport"; @@ -19068,6 +19257,15 @@ let sha512 = "2kg8qqb15pav0a2f16xmj5iqzkx28d0c6i1ydy3vzn71hfv7b7kvsbv917bwj68bh8m2mgy9j0kj8j4npy14hg2h09q4h85sz8wm990"; }; }; + "pkg-dir-2.0.0" = { + name = "pkg-dir"; + packageName = "pkg-dir"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/pkg-dir/-/pkg-dir-2.0.0.tgz"; + sha1 = "f6d5d1109e19d63edf428e0bd57e12777615334b"; + }; + }; "pkg-up-2.0.0" = { name = "pkg-up"; packageName = "pkg-up"; @@ -19104,13 +19302,13 @@ let sha1 = "b5418ef0439de5425fc4995042dced14fb2a84ff"; }; }; - "playerui-1.2.0" = { + "playerui-1.3.0" = { name = "playerui"; packageName = "playerui"; - version = "1.2.0"; + version = "1.3.0"; src = fetchurl { - url = "https://registry.npmjs.org/playerui/-/playerui-1.2.0.tgz"; - sha1 = "2d59c8cb736e189cb2398cd809469ca47077f812"; + url = "https://registry.npmjs.org/playerui/-/playerui-1.3.0.tgz"; + sha1 = "a32b907f28d17f61b74d45d46fd89dea3c4e88b5"; }; }; "please-upgrade-node-3.0.1" = { @@ -19266,13 +19464,13 @@ let sha512 = "2id33g6232s35n25daqrkz0bvzm2zmhlkfzmigkgia5q4jy9xg38spppmsdg0qswjankyi28wrbjsdwhczqfkx7h71gg8dmzz8p779l"; }; }; - "postcss-6.0.16" = { + "postcss-6.0.19" = { name = "postcss"; packageName = "postcss"; - version = "6.0.16"; + version = "6.0.19"; src = fetchurl { - url = "https://registry.npmjs.org/postcss/-/postcss-6.0.16.tgz"; - sha512 = "2h2vfl4i770c41s6zy98za52jq23a0l5976rgh8x911znh1xsv8pcwvwnck8m1yrxfvpxnihs0myv9rsinwhck3zx3k2jp6cd2prglv"; + url = "https://registry.npmjs.org/postcss/-/postcss-6.0.19.tgz"; + sha512 = "174sg3cs8v8bqg8rnk673qp365n46kls3f3a41pp0jx48qivkg06rck0j2bfyzm5hr1i6kjbcn82h1rkjgfi5jbd0amrd877m3wfpbz"; }; }; "prebuild-install-2.1.2" = { @@ -19419,6 +19617,15 @@ let sha1 = "150e20b756590ad3f91093f25a4f2ad8bff30ba3"; }; }; + "process-nextick-args-2.0.0" = { + name = "process-nextick-args"; + packageName = "process-nextick-args"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/process-nextick-args/-/process-nextick-args-2.0.0.tgz"; + sha512 = "0rw8xpqqkhs91722slvzf8icxfaimqp4w8zb3840jxr7r8n8035byl6dhdi5bm0yr6x7sdws0gf3m025fg6hqgaklwlbl4d7bah5l9j"; + }; + }; "progress-1.1.8" = { name = "progress"; packageName = "progress"; @@ -19491,6 +19698,15 @@ let sha1 = "ddd5d0f895432b1206ceb8da1275064d18e7aa23"; }; }; + "promise-inflight-1.0.1" = { + name = "promise-inflight"; + packageName = "promise-inflight"; + version = "1.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/promise-inflight/-/promise-inflight-1.0.1.tgz"; + sha1 = "98472870bf228132fcbdd868129bad12c3c029e3"; + }; + }; "promise-phantom-3.1.6" = { name = "promise-phantom"; packageName = "promise-phantom"; @@ -19536,13 +19752,13 @@ let sha1 = "26a5d6ee8c7dee4cb12208305acfb93ba382a9ee"; }; }; - "prop-types-15.6.0" = { + "prop-types-15.6.1" = { name = "prop-types"; packageName = "prop-types"; - version = "15.6.0"; + version = "15.6.1"; src = fetchurl { - url = "https://registry.npmjs.org/prop-types/-/prop-types-15.6.0.tgz"; - sha1 = "ceaf083022fc46b4a35f69e13ef75aed0d639856"; + url = "https://registry.npmjs.org/prop-types/-/prop-types-15.6.1.tgz"; + sha512 = "28vp2j7wpa97ygi4clflilfs8wj8qsz1x3fismsqx293a9cvpyc20k4pbrppyn7y6hks0dp3mn0wmj5q3y1y3i5k7ra5ssqimnkprz1"; }; }; "properties-1.2.1" = { @@ -19617,13 +19833,13 @@ let sha1 = "71c0ee3b102de3f202f3b64f608d173fcba1a918"; }; }; - "proxy-addr-2.0.2" = { + "proxy-addr-2.0.3" = { name = "proxy-addr"; packageName = "proxy-addr"; - version = "2.0.2"; + version = "2.0.3"; src = fetchurl { - url = "https://registry.npmjs.org/proxy-addr/-/proxy-addr-2.0.2.tgz"; - sha1 = "6571504f47bb988ec8180253f85dd7e14952bdec"; + url = "https://registry.npmjs.org/proxy-addr/-/proxy-addr-2.0.3.tgz"; + sha512 = "1fjf093wrxz3nm9njw491r9rvqwrcv8d8h0mnmyakpijnbff7lllysr7aq9h9w7jdvxjvaf9r055ywd7sghcqxwa2nfpdc9423c414d"; }; }; "proxy-agent-2.0.0" = { @@ -19833,13 +20049,13 @@ let sha1 = "b642dd1255da376a706b6db4fa962f5fdb74c31b"; }; }; - "pull-level-2.0.3" = { + "pull-level-2.0.4" = { name = "pull-level"; packageName = "pull-level"; - version = "2.0.3"; + version = "2.0.4"; src = fetchurl { - url = "https://registry.npmjs.org/pull-level/-/pull-level-2.0.3.tgz"; - sha1 = "9500635e257945d6feede185f5d7a24773455b17"; + url = "https://registry.npmjs.org/pull-level/-/pull-level-2.0.4.tgz"; + sha512 = "1k9a17my3m2zkz7g8hynxswrqks679vih7vd97qz5ky16x4kkms4ysxxzs5744kfzwwxg9p14xgnx8vs6kc15wjmdlkhlfy62bajvkx"; }; }; "pull-live-1.0.1" = { @@ -19851,22 +20067,22 @@ let sha1 = "a4ecee01e330155e9124bbbcf4761f21b38f51f5"; }; }; - "pull-pushable-2.1.2" = { + "pull-pushable-2.2.0" = { name = "pull-pushable"; packageName = "pull-pushable"; - version = "2.1.2"; + version = "2.2.0"; src = fetchurl { - url = "https://registry.npmjs.org/pull-pushable/-/pull-pushable-2.1.2.tgz"; - sha1 = "3fe15b8f7eec89f3972d238bc04890c9405a6dbb"; + url = "https://registry.npmjs.org/pull-pushable/-/pull-pushable-2.2.0.tgz"; + sha1 = "5f2f3aed47ad86919f01b12a2e99d6f1bd776581"; }; }; - "pull-stream-3.6.1" = { + "pull-stream-3.6.2" = { name = "pull-stream"; packageName = "pull-stream"; - version = "3.6.1"; + version = "3.6.2"; src = fetchurl { - url = "https://registry.npmjs.org/pull-stream/-/pull-stream-3.6.1.tgz"; - sha1 = "c5c2ae4a51246efeebcc65c0412a3d725a92ce00"; + url = "https://registry.npmjs.org/pull-stream/-/pull-stream-3.6.2.tgz"; + sha1 = "1ea14c6f13174e6ac4def0c2a4e76567b7cb0c5c"; }; }; "pull-window-2.1.4" = { @@ -19995,13 +20211,13 @@ let sha1 = "11f9e8fa8890fe7cb99210c0f44d0613b7372cac"; }; }; - "qjobs-1.1.5" = { + "qjobs-1.2.0" = { name = "qjobs"; packageName = "qjobs"; - version = "1.1.5"; + version = "1.2.0"; src = fetchurl { - url = "https://registry.npmjs.org/qjobs/-/qjobs-1.1.5.tgz"; - sha1 = "659de9f2cf8dcc27a1481276f205377272382e73"; + url = "https://registry.npmjs.org/qjobs/-/qjobs-1.2.0.tgz"; + sha512 = "0g8mmxjq1gn92mf9gzpf2469xwrisbg2vdlxg3bnq18gqlviy2s7l7wi99wmbz5kvbb9yn0wxbi9r83f4jchhzivn0299vigc88k0zi"; }; }; "qs-0.4.2" = { @@ -20148,13 +20364,13 @@ let sha1 = "63ac953352499ad670a9681a75680f6bf3dd1faf"; }; }; - "query-string-5.0.1" = { + "query-string-5.1.0" = { name = "query-string"; packageName = "query-string"; - version = "5.0.1"; + version = "5.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/query-string/-/query-string-5.0.1.tgz"; - sha512 = "0lcnspv96dv03600bgjxk2ypak8mysp77n47jkddpz6ldcgscwyan1akqjrddii4abb2brz6gr6yq9pcbdx63m9i16kk8m5028qrkv8"; + url = "https://registry.npmjs.org/query-string/-/query-string-5.1.0.tgz"; + sha512 = "04m33y2wlmhz19y109cv7l537bdagzl15jv3y0jc3mb7wrw3jpz15pws8m7pbfbqv9nwad46cg3c4cd620f27mwzs1hml2q373y8w0p"; }; }; "querystring-0.2.0" = { @@ -20184,13 +20400,13 @@ let sha1 = "0ca581de3174becef25ac3c2e8956342381db698"; }; }; - "r-json-1.2.8" = { - name = "r-json"; - packageName = "r-json"; - version = "1.2.8"; + "quick-lru-1.1.0" = { + name = "quick-lru"; + packageName = "quick-lru"; + version = "1.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/r-json/-/r-json-1.2.8.tgz"; - sha1 = "7440560cc1edf00b9d8d94fa30bcad7dde94eae2"; + url = "https://registry.npmjs.org/quick-lru/-/quick-lru-1.1.0.tgz"; + sha1 = "4360b17c61136ad38078397ff11416e186dcfbb8"; }; }; "rai-0.1.12" = { @@ -20211,6 +20427,15 @@ let sha512 = "3pvi9knrjp8krj1hsg8i2qmv5097fid3qnyz4wh2dvpr37x2ga6qqk7afh5f1i5sb9dsw169bara13knccdmjwnivb62xgywz868j7r"; }; }; + "random-access-file-2.0.1" = { + name = "random-access-file"; + packageName = "random-access-file"; + version = "2.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/random-access-file/-/random-access-file-2.0.1.tgz"; + sha512 = "2zbpqbs4dvnpc3dpr2yz8phz6r49j4a57jjlx7nqk6rzy2q0437g537czdxyk7cfdmhsc0yvlvs8b7p7sxax1slpwz4d8bkb851zglx"; + }; + }; "random-access-memory-2.4.0" = { name = "random-access-memory"; packageName = "random-access-memory"; @@ -20220,6 +20445,15 @@ let sha1 = "72f3d865b4b55a259879473e2fb2de3569c69ee2"; }; }; + "random-access-storage-1.1.1" = { + name = "random-access-storage"; + packageName = "random-access-storage"; + version = "1.1.1"; + src = fetchurl { + url = "https://registry.npmjs.org/random-access-storage/-/random-access-storage-1.1.1.tgz"; + sha512 = "1dswb4yr7m8350bx8z0z19iqgk2a43qbfc1qf8n3w483mqqg0f5gsykd5cg14yy8jik0n9ghy7j2f5kp1anzjna46ih9ncxpm0vq0k1"; + }; + }; "random-bytes-1.0.0" = { name = "random-bytes"; packageName = "random-bytes"; @@ -20256,13 +20490,13 @@ let sha512 = "3a0zyz736klfzzpd9vwag3gznq7lrj57igm474dq279gsnyqdgfm1brhrs78ky30gsdwz9rwnjjms00fpdpp2p3x8p9mq2zbhw3k108"; }; }; - "randomfill-1.0.3" = { + "randomfill-1.0.4" = { name = "randomfill"; packageName = "randomfill"; - version = "1.0.3"; + version = "1.0.4"; src = fetchurl { - url = "https://registry.npmjs.org/randomfill/-/randomfill-1.0.3.tgz"; - sha512 = "08l7hdx65kfxli7g9pcnlv84bdrccj7d267d1kfi93db6a4mihwyhvsipmx2n0yk9z45cs21isgpld6rib5saxg28s2g8nn3ap8dgk0"; + url = "https://registry.npmjs.org/randomfill/-/randomfill-1.0.4.tgz"; + sha512 = "0pm7c7mw7a3qwjr21f8cvxaa2sq5l4svqs51lppn833x0yvz3yx8x4vbd4rswjynykvlgvn4hrpq327pvbzp428f4b1fciy3xnmrfgk"; }; }; "range-parser-0.0.4" = { @@ -20337,15 +20571,6 @@ let sha1 = "adfeace2e4fb3098058014d08c072dcc59758774"; }; }; - "raw-body-2.2.0" = { - name = "raw-body"; - packageName = "raw-body"; - version = "2.2.0"; - src = fetchurl { - url = "https://registry.npmjs.org/raw-body/-/raw-body-2.2.0.tgz"; - sha1 = "994976cf6a5096a41162840492f0bdc5d6e7fb96"; - }; - }; "raw-body-2.3.2" = { name = "raw-body"; packageName = "raw-body"; @@ -20373,13 +20598,13 @@ let sha1 = "ce24a2029ad94c3a40d09604a87227027d7210d3"; }; }; - "rc-1.2.4" = { + "rc-1.2.5" = { name = "rc"; packageName = "rc"; - version = "1.2.4"; + version = "1.2.5"; src = fetchurl { - url = "https://registry.npmjs.org/rc/-/rc-1.2.4.tgz"; - sha1 = "a0f606caae2a3b862bbd0ef85482c0125b315fa3"; + url = "https://registry.npmjs.org/rc/-/rc-1.2.5.tgz"; + sha1 = "275cd687f6e3b36cc756baa26dfee80a790301fd"; }; }; "rc-config-loader-2.0.1" = { @@ -20490,6 +20715,15 @@ let sha1 = "6b72a8048984e0c41e79510fd5e9fa99b3b549be"; }; }; + "read-pkg-up-3.0.0" = { + name = "read-pkg-up"; + packageName = "read-pkg-up"; + version = "3.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/read-pkg-up/-/read-pkg-up-3.0.0.tgz"; + sha1 = "3ed496685dba0f8fe118d0691dc51f4a1ff96f07"; + }; + }; "read-torrent-1.3.0" = { name = "read-torrent"; packageName = "read-torrent"; @@ -20535,13 +20769,13 @@ let sha1 = "8f90341e68a53ccc928788dacfcd11b36eb9b78e"; }; }; - "readable-stream-2.3.3" = { + "readable-stream-2.3.4" = { name = "readable-stream"; packageName = "readable-stream"; - version = "2.3.3"; + version = "2.3.4"; src = fetchurl { - url = "https://registry.npmjs.org/readable-stream/-/readable-stream-2.3.3.tgz"; - sha512 = "1wlizkv2wnz2nyb0lfxgs1m27zzcvasp3n5cfrd7hm4ch1wn79df2nbhzfadba5qqdfb28vhmw3drhp46vk2q6xk524qagvr76v7slv"; + url = "https://registry.npmjs.org/readable-stream/-/readable-stream-2.3.4.tgz"; + sha512 = "1jpffi1v0l7pkzrhh8i9c6cbswa9npyx114cbfncfnzl9d7w9p08k9n703hq5xr2c3rg86qiq023sl1x8y6mawgsxgggy8ccrwk3rmy"; }; }; "readdirp-2.1.0" = { @@ -20589,13 +20823,22 @@ let sha1 = "85204b54dba82d5742e28c96756ef43af50e3384"; }; }; - "recursive-watch-1.1.2" = { + "recursive-readdir-2.2.2" = { + name = "recursive-readdir"; + packageName = "recursive-readdir"; + version = "2.2.2"; + src = fetchurl { + url = "https://registry.npmjs.org/recursive-readdir/-/recursive-readdir-2.2.2.tgz"; + sha512 = "0bb5d70l5lg02x515r2klvjhhz6xcxdb4ykbx16wq45l822bbsdd8sbki7vb28j17xr7181fmwlzhx3bizvr5xdq6cxpv53sidrq44x"; + }; + }; + "recursive-watch-1.1.3" = { name = "recursive-watch"; packageName = "recursive-watch"; - version = "1.1.2"; + version = "1.1.3"; src = fetchurl { - url = "https://registry.npmjs.org/recursive-watch/-/recursive-watch-1.1.2.tgz"; - sha1 = "912e2d62a83c8b388d288c4343495f247bc43f8e"; + url = "https://registry.npmjs.org/recursive-watch/-/recursive-watch-1.1.3.tgz"; + sha512 = "3m0s8140jpamg1xxdlsslshx10qznb889s6yc8av6vvqbs56banhmjqy9lgl7g4ppsrsja0d2lhb5lacl3nxm8ggsrpdd7xqf53hvzx"; }; }; "redent-1.0.0" = { @@ -20607,6 +20850,15 @@ let sha1 = "cf916ab1fd5f1f16dfb20822dd6ec7f730c2afde"; }; }; + "redent-2.0.0" = { + name = "redent"; + packageName = "redent"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/redent/-/redent-2.0.0.tgz"; + sha1 = "c1b2007b42d57eb1389079b3c8333639d5e1ccaa"; + }; + }; "redis-0.10.3" = { name = "redis"; packageName = "redis"; @@ -20643,13 +20895,13 @@ let sha512 = "3a3044ax6qdvss83xgjfx10h5q91ls0mwgs3wpsnxcdsiipq3cnmqzsh6glyq0r7vsmpw49jp84c2jnfrhi2bgycrkd9hhhf6ia8lrk"; }; }; - "redis-commands-1.3.1" = { + "redis-commands-1.3.4" = { name = "redis-commands"; packageName = "redis-commands"; - version = "1.3.1"; + version = "1.3.4"; src = fetchurl { - url = "https://registry.npmjs.org/redis-commands/-/redis-commands-1.3.1.tgz"; - sha1 = "81d826f45fa9c8b2011f4cd7a0fe597d241d442b"; + url = "https://registry.npmjs.org/redis-commands/-/redis-commands-1.3.4.tgz"; + sha512 = "2xl6insq71fz02pxvdcqj9q06la7nj0g5idl66yp5x7741k6xah4slrslq8wfil0fa9lx68cgl2rvzy08p1bgp7jyvjbinc8r13df25"; }; }; "redis-parser-2.6.0" = { @@ -20706,31 +20958,22 @@ let sha512 = "1crfmf19zkv0imnbbkj7bwrcyin3zxa88cs86b6apkxj8qrsmkxnydhsy2ia75q4ld10rhi2s2c36h7g77a997mh9c2z453s311jllx"; }; }; - "regex-escape-3.4.8" = { - name = "regex-escape"; - packageName = "regex-escape"; - version = "3.4.8"; - src = fetchurl { - url = "https://registry.npmjs.org/regex-escape/-/regex-escape-3.4.8.tgz"; - sha512 = "15ylzlxx4y88jldg7cgwv0dmw3ljpq27f9qf17d3g76dqh6ir1ig7dzvqv9nqpr3da1yd2r5ay8jqa6yk7ni5fbbrzgkhf3yha1av8c"; - }; - }; - "regex-not-1.0.0" = { + "regex-not-1.0.2" = { name = "regex-not"; packageName = "regex-not"; - version = "1.0.0"; + version = "1.0.2"; src = fetchurl { - url = "https://registry.npmjs.org/regex-not/-/regex-not-1.0.0.tgz"; - sha1 = "42f83e39771622df826b02af176525d6a5f157f9"; + url = "https://registry.npmjs.org/regex-not/-/regex-not-1.0.2.tgz"; + sha512 = "3cggngaj8m70zdn8kghha4mhvavm7jfy5xm2iqi94w4gi5m5irs3nlrgg975w2231y49jnnw7zhsg648pbkl9zb6vwhii83926q7917"; }; }; - "registry-auth-token-3.3.1" = { + "registry-auth-token-3.3.2" = { name = "registry-auth-token"; packageName = "registry-auth-token"; - version = "3.3.1"; + version = "3.3.2"; src = fetchurl { - url = "https://registry.npmjs.org/registry-auth-token/-/registry-auth-token-3.3.1.tgz"; - sha1 = "fb0d3289ee0d9ada2cbb52af5dfe66cb070d3006"; + url = "https://registry.npmjs.org/registry-auth-token/-/registry-auth-token-3.3.2.tgz"; + sha512 = "2fv3fbyf4wv81famfkd3j8nld0fc4sfjfxfc91wwpqwgp00nl3727c9z4sdm4gicb4nxzmhkrphsnphpamgmknsh2ak15qpmmrzvg94"; }; }; "registry-url-3.1.0" = { @@ -20877,6 +21120,15 @@ let sha1 = "29bbd92078a739f0bcce2b4ee41e837953522924"; }; }; + "replace-ext-1.0.0" = { + name = "replace-ext"; + packageName = "replace-ext"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/replace-ext/-/replace-ext-1.0.0.tgz"; + sha1 = "de63128373fcbf7c3ccfa4de5a480c45a67958eb"; + }; + }; "request-2.16.6" = { name = "request"; packageName = "request"; @@ -21147,6 +21399,15 @@ let sha1 = "f1e8f461e4064ba39e82af3cdc2a8c893d076759"; }; }; + "ret-0.1.15" = { + name = "ret"; + packageName = "ret"; + version = "0.1.15"; + src = fetchurl { + url = "https://registry.npmjs.org/ret/-/ret-0.1.15.tgz"; + sha512 = "2d7igpgyzdlpx2ni0sql8gsnqk9qivfsw6bn1aklm19kbhgxjzmlazz8szfsbdpjka4gk6i3zf0jqa0llaf7dni636fnbwfmyjmhfad"; + }; + }; "retry-0.10.1" = { name = "retry"; packageName = "retry"; @@ -21318,13 +21579,22 @@ let sha1 = "0371ab4ae0bdd720d4166d7dfda64ff7a445a6c0"; }; }; - "run-parallel-1.1.6" = { + "run-parallel-1.1.7" = { name = "run-parallel"; packageName = "run-parallel"; - version = "1.1.6"; + version = "1.1.7"; src = fetchurl { - url = "https://registry.npmjs.org/run-parallel/-/run-parallel-1.1.6.tgz"; - sha1 = "29003c9a2163e01e2d2dfc90575f2c6c1d61a039"; + url = "https://registry.npmjs.org/run-parallel/-/run-parallel-1.1.7.tgz"; + sha512 = "322cb6n7h8761gprij4m1z52rizyzvxwviima893gphrbrxkhjv6q4ifwspd0w9jhlk7jj0x64449aagms18v7ps6hr774ymvavh7lw"; + }; + }; + "run-queue-1.0.3" = { + name = "run-queue"; + packageName = "run-queue"; + version = "1.0.3"; + src = fetchurl { + url = "https://registry.npmjs.org/run-queue/-/run-queue-1.0.3.tgz"; + sha1 = "e848396f057d223f24386924618e25694161ec47"; }; }; "run-series-1.1.4" = { @@ -21336,13 +21606,13 @@ let sha1 = "89a73ddc5e75c9ef8ab6320c0a1600d6a41179b9"; }; }; - "rusha-0.8.12" = { + "rusha-0.8.13" = { name = "rusha"; packageName = "rusha"; - version = "0.8.12"; + version = "0.8.13"; src = fetchurl { - url = "https://registry.npmjs.org/rusha/-/rusha-0.8.12.tgz"; - sha1 = "5d838ce1fce8b145674ee771eaad5bcb2575e64b"; + url = "https://registry.npmjs.org/rusha/-/rusha-0.8.13.tgz"; + sha1 = "9a084e7b860b17bff3015b92c67a6a336191513a"; }; }; "rx-2.5.3" = { @@ -21426,22 +21696,31 @@ let sha1 = "3e76723e38dfdda13c9b1d29a1e07ffee4b30b57"; }; }; - "safe-json-stringify-1.0.4" = { + "safe-json-stringify-1.1.0" = { name = "safe-json-stringify"; packageName = "safe-json-stringify"; - version = "1.0.4"; + version = "1.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/safe-json-stringify/-/safe-json-stringify-1.0.4.tgz"; - sha1 = "81a098f447e4bbc3ff3312a243521bc060ef5911"; + url = "https://registry.npmjs.org/safe-json-stringify/-/safe-json-stringify-1.1.0.tgz"; + sha512 = "30fqwpa7qn9rsk4va9ih61jqhm0x59s3wa2n5kff1ygdwpi9hxmpig24y1vhdv1di2pfd6gy0iwkryix6lc5gff7pcb3xa7l58nsc0k"; }; }; - "sanitize-html-1.17.0" = { + "safe-regex-1.1.0" = { + name = "safe-regex"; + packageName = "safe-regex"; + version = "1.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/safe-regex/-/safe-regex-1.1.0.tgz"; + sha1 = "40a3669f3b077d1e943d44629e157dd48023bf2e"; + }; + }; + "sanitize-html-1.18.2" = { name = "sanitize-html"; packageName = "sanitize-html"; - version = "1.17.0"; + version = "1.18.2"; src = fetchurl { - url = "https://registry.npmjs.org/sanitize-html/-/sanitize-html-1.17.0.tgz"; - sha512 = "1gnj506vfw53kv0d0y0v2cg4694lyq7fbcbpjllzmls3z3b8pdrh40nw3pp70bfs851c8sklh3f4zifaznd02jkbn62z089x7kbmgg6"; + url = "https://registry.npmjs.org/sanitize-html/-/sanitize-html-1.18.2.tgz"; + sha512 = "2kbz3x78dradp1xaddz60iakax4cj1rqgdxhjj5ljfgwm17kjc5pvr1kh2lyqrbxxmcx9kbfv8pa68af126v5clprks11vvwq1y2r77"; }; }; "sax-0.3.5" = { @@ -21507,6 +21786,24 @@ let sha512 = "1dn291mjsda42w8kldlbmngk6dhjxfbvvd5lckyqmwbjaj6069iq3wx0nvcfglwnpddz2qa93lzf4hv77iz43bd2qixa079sjzl799n"; }; }; + "schema-utils-0.3.0" = { + name = "schema-utils"; + packageName = "schema-utils"; + version = "0.3.0"; + src = fetchurl { + url = "https://registry.npmjs.org/schema-utils/-/schema-utils-0.3.0.tgz"; + sha1 = "f5877222ce3e931edae039f17eb3716e7137f8cf"; + }; + }; + "schema-utils-0.4.5" = { + name = "schema-utils"; + packageName = "schema-utils"; + version = "0.4.5"; + src = fetchurl { + url = "https://registry.npmjs.org/schema-utils/-/schema-utils-0.4.5.tgz"; + sha512 = "1y97jl7qm7xvd867cghrgfzrlyf5z05rvwpigvi4ijzy4c8ckqr0bl76ym5nh6akiyc2qb19kbnmmk1r8nkfm4fsp4lznnpsipy72n9"; + }; + }; "scoped-regex-1.0.0" = { name = "scoped-regex"; packageName = "scoped-regex"; @@ -21696,15 +21993,6 @@ let sha1 = "765e7607c8055452bba6f0b052595350986036de"; }; }; - "send-0.15.3" = { - name = "send"; - packageName = "send"; - version = "0.15.3"; - src = fetchurl { - url = "https://registry.npmjs.org/send/-/send-0.15.3.tgz"; - sha1 = "5013f9f99023df50d1bd9892c19e3defd1d53309"; - }; - }; "send-0.15.6" = { name = "send"; packageName = "send"; @@ -21723,6 +22011,15 @@ let sha512 = "3c9rfxzsayrnka50s3hdbln9sjzad94ll4z2nx83i3rqciy4dxj05x34sjmm64k46zmk99pj8g4bcwk476a3iqzpcxgja28s8jqnl0j"; }; }; + "send-0.16.2" = { + name = "send"; + packageName = "send"; + version = "0.16.2"; + src = fetchurl { + url = "https://registry.npmjs.org/send/-/send-0.16.2.tgz"; + sha512 = "1kh8iy2h9x6mqbb0kssb4d966irri0z8g2151jwx47q32dbmds01j9fs2c8hln68dqqh0ims8p450z3xfw6vs8v2k253c1cyla1ibhk"; + }; + }; "sentiment-2.1.0" = { name = "sentiment"; packageName = "sentiment"; @@ -21750,6 +22047,15 @@ let sha1 = "90cff19d02e07027fd767f5ead3e7b95d1e7380c"; }; }; + "serialize-javascript-1.4.0" = { + name = "serialize-javascript"; + packageName = "serialize-javascript"; + version = "1.4.0"; + src = fetchurl { + url = "https://registry.npmjs.org/serialize-javascript/-/serialize-javascript-1.4.0.tgz"; + sha1 = "7c958514db6ac2443a8abc062dc9f7886a7f6005"; + }; + }; "serve-favicon-2.3.2" = { name = "serve-favicon"; packageName = "serve-favicon"; @@ -21795,15 +22101,6 @@ let sha1 = "ce5a6ecd3101fed5ec09827dac22a9c29bfb0535"; }; }; - "serve-static-1.12.3" = { - name = "serve-static"; - packageName = "serve-static"; - version = "1.12.3"; - src = fetchurl { - url = "https://registry.npmjs.org/serve-static/-/serve-static-1.12.3.tgz"; - sha1 = "9f4ba19e2f3030c547f8af99107838ec38d5b1e2"; - }; - }; "serve-static-1.12.6" = { name = "serve-static"; packageName = "serve-static"; @@ -21822,6 +22119,15 @@ let sha512 = "2ahchxbzy0wr61gjy85p35cx4rkfb5347fmglk5rb2wawla3nhx6xx8hsgvmvjcsp5vfdilvf84kcnvp832f1anylsg4sqgpdk188w5"; }; }; + "serve-static-1.13.2" = { + name = "serve-static"; + packageName = "serve-static"; + version = "1.13.2"; + src = fetchurl { + url = "https://registry.npmjs.org/serve-static/-/serve-static-1.13.2.tgz"; + sha512 = "2gkkd7jlmrn2a8d736x3fcij9jj16aglbq6pcivb897g01k1dlrpvb565d3hq9zwafyr60zlcqr5flgd2yqs36s8wxpylxqnck5vyx7"; + }; + }; "serve-static-1.8.1" = { name = "serve-static"; packageName = "serve-static"; @@ -21840,13 +22146,13 @@ let sha1 = "f13bf928e42b9c3e79383e61cc3998b5d14e6cdd"; }; }; - "service-runner-2.5.0" = { + "service-runner-2.5.1" = { name = "service-runner"; packageName = "service-runner"; - version = "2.5.0"; + version = "2.5.1"; src = fetchurl { - url = "https://registry.npmjs.org/service-runner/-/service-runner-2.5.0.tgz"; - sha1 = "78b347542c5c6ad2f31e78a10533045fc6414c1f"; + url = "https://registry.npmjs.org/service-runner/-/service-runner-2.5.1.tgz"; + sha1 = "b282214463187607748aa3695023a09f5d28c672"; }; }; "set-blocking-2.0.0" = { @@ -22011,13 +22317,13 @@ let sha1 = "decbcf874b0d1e5fb72e14b164a9683048e9acb3"; }; }; - "shelljs-0.8.0" = { + "shelljs-0.8.1" = { name = "shelljs"; packageName = "shelljs"; - version = "0.8.0"; + version = "0.8.1"; src = fetchurl { - url = "https://registry.npmjs.org/shelljs/-/shelljs-0.8.0.tgz"; - sha512 = "0z8im8zw5g4r44mf2iiy61kxi5idq41b4cs6d4c3lv9shh8ag2gnp25kvwawg899bczvh9g95b07gcpabik39md8q2vmnwcjjizdgn1"; + url = "https://registry.npmjs.org/shelljs/-/shelljs-0.8.1.tgz"; + sha512 = "0c12wlk7s62rnm6d8cc4frddll01p5f117v2ss075y9zxxfpl5qr322bw7qdksgl7ljfc04rv2wyn6qyjv1m5953ywmgk39srif43v0"; }; }; "shellwords-0.1.1" = { @@ -22110,13 +22416,13 @@ let sha512 = "2r1w3cxxmd92r19mjrlzwn6xypjd5vrx0gk21l2bmxcp1x54pavhmifbhq8llxfk6z2lmzly7g3l8rrdl19m65nzlcicwy7cfn3sha6"; }; }; - "simple-git-1.89.0" = { + "simple-git-1.91.0" = { name = "simple-git"; packageName = "simple-git"; - version = "1.89.0"; + version = "1.91.0"; src = fetchurl { - url = "https://registry.npmjs.org/simple-git/-/simple-git-1.89.0.tgz"; - sha1 = "ef52fe734d5060566ce187b2bbace36c2323e34c"; + url = "https://registry.npmjs.org/simple-git/-/simple-git-1.91.0.tgz"; + sha1 = "842db6c2ba08328e93c17391a895b850518cd13a"; }; }; "simple-lru-cache-0.0.2" = { @@ -22425,13 +22731,13 @@ let sha512 = "0k2smmr24w5hb1cpql6vcgh58vzp4pmh9anf0bgz3arlsgq1mapnlq9fjqr6xs10aq1cmxaw987fwknqi62frax0fvs9bj3q3kmpg8l"; }; }; - "snyk-1.69.3" = { + "snyk-1.69.10" = { name = "snyk"; packageName = "snyk"; - version = "1.69.3"; + version = "1.69.10"; src = fetchurl { - url = "https://registry.npmjs.org/snyk/-/snyk-1.69.3.tgz"; - sha1 = "c948a05982b206002a09d4e55fb16aee6d5e80e0"; + url = "https://registry.npmjs.org/snyk/-/snyk-1.69.10.tgz"; + sha1 = "34c66b21791435dd17fa2955904a5fdd6b57415d"; }; }; "snyk-config-1.0.1" = { @@ -22497,31 +22803,22 @@ let sha512 = "2fihlcs2qxdbdfy1pjnf7110l6h4r16vkp0q51wqsfd8fw5s1qgb34plii6yhbfbs8a1il93i6hfn93yclbv50m2129wg7naf57jlqi"; }; }; - "snyk-policy-1.10.1" = { + "snyk-policy-1.10.2" = { name = "snyk-policy"; packageName = "snyk-policy"; - version = "1.10.1"; + version = "1.10.2"; src = fetchurl { - url = "https://registry.npmjs.org/snyk-policy/-/snyk-policy-1.10.1.tgz"; - sha1 = "b1a26c8aef529c61604aca382111e535d511b763"; + url = "https://registry.npmjs.org/snyk-policy/-/snyk-policy-1.10.2.tgz"; + sha1 = "2a7bf0f07c7b811b9dda93cf9bbb10dc992dd7bc"; }; }; - "snyk-python-plugin-1.5.3" = { + "snyk-python-plugin-1.5.6" = { name = "snyk-python-plugin"; packageName = "snyk-python-plugin"; - version = "1.5.3"; + version = "1.5.6"; src = fetchurl { - url = "https://registry.npmjs.org/snyk-python-plugin/-/snyk-python-plugin-1.5.3.tgz"; - sha512 = "1yln7fd9x5zayvnq5hrvh44k9f37vnpirvw6gk87aq560kslsq4p2hknq02iq6az58wbc6r69g5rrszmv689c0ky3wjbmb2hmc9q7c1"; - }; - }; - "snyk-recursive-readdir-2.0.0" = { - name = "snyk-recursive-readdir"; - packageName = "snyk-recursive-readdir"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/snyk-recursive-readdir/-/snyk-recursive-readdir-2.0.0.tgz"; - sha1 = "5cb59e94698169e0205a60e7d6a506d0b4d52ff3"; + url = "https://registry.npmjs.org/snyk-python-plugin/-/snyk-python-plugin-1.5.6.tgz"; + sha512 = "1iv7h9k0vj7g2zzx8nzighx84q70kwvl4hhzd4fzxmc8vv06ymwwn4v7cirgbksqrjf9z1bfxq8id308ifb1flyas7blz8zs7xf4w30"; }; }; "snyk-resolve-1.0.0" = { @@ -22542,13 +22839,13 @@ let sha1 = "13743a058437dff890baaf437c333c966a743cb6"; }; }; - "snyk-sbt-plugin-1.2.2" = { + "snyk-sbt-plugin-1.2.4" = { name = "snyk-sbt-plugin"; packageName = "snyk-sbt-plugin"; - version = "1.2.2"; + version = "1.2.4"; src = fetchurl { - url = "https://registry.npmjs.org/snyk-sbt-plugin/-/snyk-sbt-plugin-1.2.2.tgz"; - sha512 = "1sq30kk2kq0flsak5759wylylzgm6ivd6di4lmbkahy858i26yf6kf86f2m86wvlz4fcmxsbcl7p0wkd498cx193v4nbr2hq39jyjlz"; + url = "https://registry.npmjs.org/snyk-sbt-plugin/-/snyk-sbt-plugin-1.2.4.tgz"; + sha512 = "3fry8q6f0nrcrzs67zjxkgabb0hinyn5zy1kxq8wf9ca1r0fs67mk4ybiy4fxjy8rwj2axbhhhc3lf5wi97m3amh9k70pakg08yq7q4"; }; }; "snyk-tree-1.0.0" = { @@ -22695,13 +22992,13 @@ let sha1 = "dd532025103ce429697326befd64005fcfe5b4a0"; }; }; - "socket.io-parser-3.1.2" = { + "socket.io-parser-3.1.3" = { name = "socket.io-parser"; packageName = "socket.io-parser"; - version = "3.1.2"; + version = "3.1.3"; src = fetchurl { - url = "https://registry.npmjs.org/socket.io-parser/-/socket.io-parser-3.1.2.tgz"; - sha1 = "dbc2282151fc4faebbe40aeedc0772eba619f7f2"; + url = "https://registry.npmjs.org/socket.io-parser/-/socket.io-parser-3.1.3.tgz"; + sha512 = "3pd3lbxawkd1zs739v0vv81vhf6pyax989j96hrc7vhql0xv7kn13sr893hrnn6m71jngw5h61523dq0b0p8drvff0fm0lbz8fbcil3"; }; }; "socks-1.1.10" = { @@ -22947,13 +23244,13 @@ let sha512 = "276x5a16yv0nlzjdvspsnbkxqhv8lvfj7a0sfzkaasfcwa2rm1ni3h3c0fva63bfqnazbywvs4pzrnbwg43j7gpymjd9cbbndq5x4qi"; }; }; - "source-map-support-0.5.2" = { + "source-map-support-0.5.3" = { name = "source-map-support"; packageName = "source-map-support"; - version = "0.5.2"; + version = "0.5.3"; src = fetchurl { - url = "https://registry.npmjs.org/source-map-support/-/source-map-support-0.5.2.tgz"; - sha512 = "3hgzhp5z7w8w0sadaa0m7sspd2ihnba3j1rd7l53l1mvx4wjblrbjq2642zz0xxkv4bag4hs4pms7dz5rc8hk5d61d49h6hjrwxqcgp"; + url = "https://registry.npmjs.org/source-map-support/-/source-map-support-0.5.3.tgz"; + sha512 = "3xy2ylp2qm8jwglcsf2fjwvn5w56im64w7yjghyv9ilw2fc5qj65w8h38lpls27m3b5prv8x9cnfmrhkfk7rlb52hmf810ycs0i7abq"; }; }; "source-map-url-0.4.0" = { @@ -23001,31 +23298,40 @@ let sha1 = "b00799557eb7fb0c8376c29d44e8a1ea67e57476"; }; }; - "spdx-correct-1.0.2" = { + "spdx-correct-3.0.0" = { name = "spdx-correct"; packageName = "spdx-correct"; - version = "1.0.2"; + version = "3.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/spdx-correct/-/spdx-correct-1.0.2.tgz"; - sha1 = "4b3073d933ff51f3912f03ac5519498a4150db40"; + url = "https://registry.npmjs.org/spdx-correct/-/spdx-correct-3.0.0.tgz"; + sha512 = "3xgkqk4hsm4nzvy68icv1rlv4s0qgb7mwpi9s4z2mp1a5fwny6kc6m4nqa7zzx2k7mrjlh7psci9lb7892bl3q4r4y2f4sw7vvnhprp"; }; }; - "spdx-expression-parse-1.0.4" = { + "spdx-exceptions-2.1.0" = { + name = "spdx-exceptions"; + packageName = "spdx-exceptions"; + version = "2.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/spdx-exceptions/-/spdx-exceptions-2.1.0.tgz"; + sha512 = "057m2ab3y8j38xb89w7d191hfaa693vbf7wnwkf302zicsgi2v5ayvcc4f03vyj4yyycqasqp3ryp2d3q0vcaq54r4ls2g5dar4vbg0"; + }; + }; + "spdx-expression-parse-3.0.0" = { name = "spdx-expression-parse"; packageName = "spdx-expression-parse"; - version = "1.0.4"; + version = "3.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/spdx-expression-parse/-/spdx-expression-parse-1.0.4.tgz"; - sha1 = "9bdf2f20e1f40ed447fbe273266191fced51626c"; + url = "https://registry.npmjs.org/spdx-expression-parse/-/spdx-expression-parse-3.0.0.tgz"; + sha512 = "351djgqvsgqmfg6h764c2k09dmixczw5073jirm8km6i1yym4xjrzc7g5ckwkidi3gls7s910m4ahl8sh37dsb478j8j3sigbfq63k2"; }; }; - "spdx-license-ids-1.2.2" = { + "spdx-license-ids-3.0.0" = { name = "spdx-license-ids"; packageName = "spdx-license-ids"; - version = "1.2.2"; + version = "3.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/spdx-license-ids/-/spdx-license-ids-1.2.2.tgz"; - sha1 = "c9df7a3424594ade6bd11900d596696dc06bac57"; + url = "https://registry.npmjs.org/spdx-license-ids/-/spdx-license-ids-3.0.0.tgz"; + sha512 = "066gb8vcffv2mf3lbmxvxp5b60jviw32x52n50l3zgl9z4cgwg74ca4kr4y5c3mss736bmg9nxl1lvprishbikqy0jy56770v10zqfv"; }; }; "spdy-1.32.5" = { @@ -23199,6 +23505,15 @@ let sha512 = "283n1p781cl2pj3jk32blcvwjdlaixng0v5x2f9qi3ndxrmyg3hk4clsjpcfsszkymy40q426yz5skax4ivsmll2p9hhcc00ivc4ijr"; }; }; + "ssri-5.2.4" = { + name = "ssri"; + packageName = "ssri"; + version = "5.2.4"; + src = fetchurl { + url = "https://registry.npmjs.org/ssri/-/ssri-5.2.4.tgz"; + sha512 = "2si1dr4dwg0bkvsn38d6rk5raw5lbn2m9giwf8pnhy55wqgxsvv7b1pn252wj166cd8j302a2gwjy00ni473yr1vrxrzmssqs000waj"; + }; + }; "stable-0.1.6" = { name = "stable"; packageName = "stable"; @@ -23334,13 +23649,13 @@ let sha1 = "fb4d8a1420ea362764e21ad4780397bebcb41cbe"; }; }; - "stream-consume-0.1.0" = { + "stream-consume-0.1.1" = { name = "stream-consume"; packageName = "stream-consume"; - version = "0.1.0"; + version = "0.1.1"; src = fetchurl { - url = "https://registry.npmjs.org/stream-consume/-/stream-consume-0.1.0.tgz"; - sha1 = "a41ead1a6d6081ceb79f65b061901b6d8f3d1d0f"; + url = "https://registry.npmjs.org/stream-consume/-/stream-consume-0.1.1.tgz"; + sha512 = "3553srgw60szs493rx8nyy09lcjkw3bh16c2b5z30jcf9h95r4hdiqjk31r9190w47av8dg4zx60fnnvqanv95hbpxl7314723vgmml"; }; }; "stream-counter-0.2.0" = { @@ -23766,6 +24081,15 @@ let sha1 = "0c7962a6adefa7bbd4ac366460a638552ae1a0a2"; }; }; + "strip-indent-2.0.0" = { + name = "strip-indent"; + packageName = "strip-indent"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/strip-indent/-/strip-indent-2.0.0.tgz"; + sha1 = "5ef8db295d01e6ed6cbf7aab96998d7822527b68"; + }; + }; "strip-json-comments-0.1.3" = { name = "strip-json-comments"; packageName = "strip-json-comments"; @@ -23793,13 +24117,13 @@ let sha1 = "3c531942e908c2697c0ec344858c286c7ca0a60a"; }; }; - "strong-data-uri-1.0.4" = { + "strong-data-uri-1.0.5" = { name = "strong-data-uri"; packageName = "strong-data-uri"; - version = "1.0.4"; + version = "1.0.5"; src = fetchurl { - url = "https://registry.npmjs.org/strong-data-uri/-/strong-data-uri-1.0.4.tgz"; - sha1 = "136765ebaf8e0f4ad60c4b146779f062c29d18f0"; + url = "https://registry.npmjs.org/strong-data-uri/-/strong-data-uri-1.0.5.tgz"; + sha512 = "2mwdm0k873sdi2bramixwg6fafqyi2313scq32fsnq2qa5hqbpdln34rc9a67wd15mi05v3c6bfiw6r4h7dy4aac1q3ac8b2ig6j96n"; }; }; "strong-log-transformer-1.0.6" = { @@ -23928,13 +24252,13 @@ let sha1 = "be7a0de484dec5c5cddf8b3d59125044912f635b"; }; }; - "supports-color-5.1.0" = { + "supports-color-5.2.0" = { name = "supports-color"; packageName = "supports-color"; - version = "5.1.0"; + version = "5.2.0"; src = fetchurl { - url = "https://registry.npmjs.org/supports-color/-/supports-color-5.1.0.tgz"; - sha512 = "04q31rfgx0r6jgs2r1k6kmzab1vw3qrikiv8wsl86rxll77vdalrag7r4ypww3qp6v8k3avsjc0jxd3ga45fb5f51akm30a9b100ba7"; + url = "https://registry.npmjs.org/supports-color/-/supports-color-5.2.0.tgz"; + sha512 = "3jqwn02aw7bczn3f56mfbx3nvhrydwsc6g9vkp54794rfdg61vbp3qy4vdj1n8jvpahlcywpcv0afxjxbj5a3wm9lpqcsr5ix5nyzqp"; }; }; "symbol-observable-1.0.1" = { @@ -23955,13 +24279,13 @@ let sha1 = "8030046939b00096e625c0dd6b3905bc7b85709c"; }; }; - "syntax-error-1.3.0" = { + "syntax-error-1.4.0" = { name = "syntax-error"; packageName = "syntax-error"; - version = "1.3.0"; + version = "1.4.0"; src = fetchurl { - url = "https://registry.npmjs.org/syntax-error/-/syntax-error-1.3.0.tgz"; - sha1 = "1ed9266c4d40be75dc55bf9bb1cb77062bb96ca1"; + url = "https://registry.npmjs.org/syntax-error/-/syntax-error-1.4.0.tgz"; + sha512 = "3psid3r9b0gmnkf2ggydlw1nrcnyqa78smdihifdvff5vmlq92v8qyd6zfi94wczhllcyxl78zbc47cvz3h6xpa9v372xp6msxybwv0"; }; }; "table-3.8.3" = { @@ -23973,13 +24297,13 @@ let sha1 = "2bbc542f0fda9861a755d3947fefd8b3f513855f"; }; }; - "table-4.0.2" = { + "table-4.0.3" = { name = "table"; packageName = "table"; - version = "4.0.2"; + version = "4.0.3"; src = fetchurl { - url = "https://registry.npmjs.org/table/-/table-4.0.2.tgz"; - sha512 = "2q47avrxblc0an2g5ij8sd7ss2bqhdxy2949dk774gyg9vmsivg7fwyn885v2va72sxiv5k59ifvi3hg4ra6z95lr8in6sjyw008jai"; + url = "https://registry.npmjs.org/table/-/table-4.0.3.tgz"; + sha512 = "0m684sf5sicq9hlavaw7wrm8d10p2vm1cvvrxgl7f2rpqbn5cm6hhsbzb0is6r1bm19p7960dwxif6lc48bz712kx27s176hhafgfjb"; }; }; "tabtab-1.3.2" = { @@ -24028,6 +24352,15 @@ let sha1 = "99372a5c999bf2df160afc0d74bed4f47948cd22"; }; }; + "tapable-1.0.0" = { + name = "tapable"; + packageName = "tapable"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/tapable/-/tapable-1.0.0.tgz"; + sha512 = "2r08r7ymr8jvw7f1vamajcm9na9fscx6qiby1l3c99ndk1x50v0k3x6lhqmysk9bwczdl8kr2908lfvi6j5mfz0dam7cii4sin6213m"; + }; + }; "tape-2.3.3" = { name = "tape"; packageName = "tape"; @@ -24064,13 +24397,13 @@ let sha512 = "1ryql8hyrrhd0gdd71ishbj3cnr8ay0i0wpvy9mj3hjiy35cc1wa0h07wz8jwils98j00gr03ix3cf2j1xm43xjn9bsavwn1yr4a0x5"; }; }; - "tar-4.3.0" = { + "tar-4.4.0" = { name = "tar"; packageName = "tar"; - version = "4.3.0"; + version = "4.4.0"; src = fetchurl { - url = "https://registry.npmjs.org/tar/-/tar-4.3.0.tgz"; - sha512 = "1844acixnz54bqf6q85avzdgq39i30d6gridz084iff0f3fh670wag8gs72k8dhbvmhxs2czlax99bfwypyfxbhrq3w80xb2kl5gbjd"; + url = "https://registry.npmjs.org/tar/-/tar-4.4.0.tgz"; + sha512 = "2jqkq86l5d9kaqvxd7m5r48smv4f8y10vx7r0rpwafwz5sskrmlpdswp8g351jfk5if2jv0a3wbjpss31x1cf6x5dx8zhib465576c0"; }; }; "tar-fs-1.16.0" = { @@ -24226,13 +24559,13 @@ let sha1 = "4ca2fffc02a51290d2744b9e3f557693ca6b627a"; }; }; - "thriftrw-3.11.1" = { + "thriftrw-3.11.2" = { name = "thriftrw"; packageName = "thriftrw"; - version = "3.11.1"; + version = "3.11.2"; src = fetchurl { - url = "https://registry.npmjs.org/thriftrw/-/thriftrw-3.11.1.tgz"; - sha1 = "5a2f5165d665bb195e665e5b5b9f8897dac23acc"; + url = "https://registry.npmjs.org/thriftrw/-/thriftrw-3.11.2.tgz"; + sha512 = "2cll36ns03xrjz6y3116ca9hgnqsi384k6mcyk8xpl81znx0lkwkz7iwyhprc0rm1ry6mrlwpdrnh38sfqvm95hd7ila270a71ah86y"; }; }; "throat-3.2.0" = { @@ -24415,13 +24748,13 @@ let sha1 = "4902ce040bd13d845c8f59b27e9d59bad6f39929"; }; }; - "tiny-lr-1.1.0" = { + "tiny-lr-1.1.1" = { name = "tiny-lr"; packageName = "tiny-lr"; - version = "1.1.0"; + version = "1.1.1"; src = fetchurl { - url = "https://registry.npmjs.org/tiny-lr/-/tiny-lr-1.1.0.tgz"; - sha512 = "06rjm9vpcs6h1890gzzj8pbn5k70724dz61qnk2fjwgiva4klx9zzwds5iidlgc31p7q41x6qz81pbbh116ap3jznqw07camvqzm1bz"; + url = "https://registry.npmjs.org/tiny-lr/-/tiny-lr-1.1.1.tgz"; + sha512 = "2w2806fq55jn2vd74qn5ryir4j6nbfycd8c2w030fckrwvlif6iiy5ranmsdlyqgcrs87x4zxwnlmwrz6dzn41l7861lsbcgc1s3373"; }; }; "tinycolor-0.0.1" = { @@ -24550,13 +24883,13 @@ let sha1 = "297588b7b0e7e0ac08e04e672f85c1f4999e17af"; }; }; - "to-regex-3.0.1" = { + "to-regex-3.0.2" = { name = "to-regex"; packageName = "to-regex"; - version = "3.0.1"; + version = "3.0.2"; src = fetchurl { - url = "https://registry.npmjs.org/to-regex/-/to-regex-3.0.1.tgz"; - sha1 = "15358bee4a2c83bd76377ba1dc049d0f18837aae"; + url = "https://registry.npmjs.org/to-regex/-/to-regex-3.0.2.tgz"; + sha512 = "03lcq1y1ks55lss37m3cx52f8f4wj85rqsxfxrhi3y8rqa0iiny6df8ardg2f742z870v7xw749lcsxh8yplsmbvaig4rrds1w6asqm"; }; }; "to-regex-range-2.1.1" = { @@ -24685,13 +25018,13 @@ let sha1 = "c83a1830f4e5ef0b93ef2a3488e724f8de016ac7"; }; }; - "tough-cookie-2.3.3" = { + "tough-cookie-2.3.4" = { name = "tough-cookie"; packageName = "tough-cookie"; - version = "2.3.3"; + version = "2.3.4"; src = fetchurl { - url = "https://registry.npmjs.org/tough-cookie/-/tough-cookie-2.3.3.tgz"; - sha1 = "0b618a5565b6dea90bf3425d04d55edc475a7561"; + url = "https://registry.npmjs.org/tough-cookie/-/tough-cookie-2.3.4.tgz"; + sha512 = "0ncm6j3cjq1f26mzjf04k9bkw1b08w53s4qa3a11c1bdj4pgnqv1422c1xs5jyy6y1psppjx52fhagq5zkjkgrcpdkxcdiry96r77jd"; }; }; "township-client-1.3.2" = { @@ -24775,6 +25108,15 @@ let sha1 = "5887966bb582a4503a41eb524f7d35011815a613"; }; }; + "trim-newlines-2.0.0" = { + name = "trim-newlines"; + packageName = "trim-newlines"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/trim-newlines/-/trim-newlines-2.0.0.tgz"; + sha1 = "b403d0b91be50c331dfc4b82eeceb22c3de16d20"; + }; + }; "trim-off-newlines-1.0.1" = { name = "trim-off-newlines"; packageName = "trim-off-newlines"; @@ -24811,13 +25153,13 @@ let sha1 = "a9fd8b0394b0ae8fff82e0633a0a36ccad5b5f86"; }; }; - "truncate-1.0.5" = { + "truncate-2.0.1" = { name = "truncate"; packageName = "truncate"; - version = "1.0.5"; + version = "2.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/truncate/-/truncate-1.0.5.tgz"; - sha1 = "c636c6c1f50eed7c927af06c1dbffab53c7abe28"; + url = "https://registry.npmjs.org/truncate/-/truncate-2.0.1.tgz"; + sha1 = "dd1a6d15630515663d8475f6f24edf2f800ebb1b"; }; }; "tslib-1.9.0" = { @@ -24856,6 +25198,15 @@ let sha1 = "a157ba402da24e9bf957f9aa69d524eed42901a6"; }; }; + "tty-browserify-0.0.1" = { + name = "tty-browserify"; + packageName = "tty-browserify"; + version = "0.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/tty-browserify/-/tty-browserify-0.0.1.tgz"; + sha512 = "33h4i99m8bj5vqm3hmvfhi19whavny64ic0mr4yl8s14riw077ballp49zbv3kzy8615pad3gfcy7fxa86za1q41biqpmdwn8xxlx0b"; + }; + }; "tunnel-0.0.2" = { name = "tunnel"; packageName = "tunnel"; @@ -24937,13 +25288,13 @@ let sha1 = "5884cab512cf1d355e3fb784f30804b2b520db72"; }; }; - "type-detect-4.0.7" = { + "type-detect-4.0.8" = { name = "type-detect"; packageName = "type-detect"; - version = "4.0.7"; + version = "4.0.8"; src = fetchurl { - url = "https://registry.npmjs.org/type-detect/-/type-detect-4.0.7.tgz"; - sha512 = "06b3944s70gv2pdbdkqpxp88izg727825j0lpdl0pdgs6p6nvpkzb034lycqin3a3nydd0jaafd86a991c78pabrqbd6m8cj3p7a671"; + url = "https://registry.npmjs.org/type-detect/-/type-detect-4.0.8.tgz"; + sha512 = "3z3kf4kgd3czn50a158v1k2l61lpbznrbk8xvh2pdsfsrcsda3271427fzmp1r7awnvvzrhzclfm03cpv671rdlqyz56xpmh6cgzyni"; }; }; "type-is-1.5.7" = { @@ -24955,22 +25306,22 @@ let sha1 = "b9368a593cc6ef7d0645e78b2f4c64cbecd05e90"; }; }; - "type-is-1.6.15" = { + "type-is-1.6.16" = { name = "type-is"; packageName = "type-is"; - version = "1.6.15"; + version = "1.6.16"; src = fetchurl { - url = "https://registry.npmjs.org/type-is/-/type-is-1.6.15.tgz"; - sha1 = "cab10fb4909e441c82842eafe1ad646c81804410"; + url = "https://registry.npmjs.org/type-is/-/type-is-1.6.16.tgz"; + sha512 = "3sqj799a59bbpyx9h2nhwjgi776w2jc2pp620b1rgk22fc3czfbxmav4m8kq0ilaqfxx6v1hww5pzgf13bnz6n84fx62qvazszia68x"; }; }; - "typechecker-4.4.1" = { + "typechecker-4.5.0" = { name = "typechecker"; packageName = "typechecker"; - version = "4.4.1"; + version = "4.5.0"; src = fetchurl { - url = "https://registry.npmjs.org/typechecker/-/typechecker-4.4.1.tgz"; - sha1 = "f97b95f51b038417212d677d45a373ee7bced7e6"; + url = "https://registry.npmjs.org/typechecker/-/typechecker-4.5.0.tgz"; + sha512 = "3izx27ms2gldkwjyllsg41zpgd7x57v7zrkgrxlrfhs3gc6csg91m6dk23kvcralq9rd5pn7njz4yj8raj31q7ybhd54v9pr7yw98vf"; }; }; "typedarray-0.0.6" = { @@ -24982,22 +25333,13 @@ let sha1 = "867ac74e3864187b1d3d47d996a78ec5c8830777"; }; }; - "typescript-2.4.2" = { + "typescript-2.7.2" = { name = "typescript"; packageName = "typescript"; - version = "2.4.2"; + version = "2.7.2"; src = fetchurl { - url = "https://registry.npmjs.org/typescript/-/typescript-2.4.2.tgz"; - sha1 = "f8395f85d459276067c988aa41837a8f82870844"; - }; - }; - "typescript-2.6.2" = { - name = "typescript"; - packageName = "typescript"; - version = "2.6.2"; - src = fetchurl { - url = "https://registry.npmjs.org/typescript/-/typescript-2.6.2.tgz"; - sha1 = "3c5b6fd7f6de0914269027f03c0946758f7673a4"; + url = "https://registry.npmjs.org/typescript/-/typescript-2.7.2.tgz"; + sha512 = "2gjv6xyp9rqfdfqadayc4b36b79sjdiwsxa38z43v01cdn3xbc06ax90mjv36hxj9j96nfbwr6w1wn7n0zq8f3y3fw4jfy0j1hw5557"; }; }; "typewise-1.0.3" = { @@ -25045,31 +25387,22 @@ let sha512 = "39ac4xrr9v9ya7rbn5cz8dss5j3s36yhpj9qrhfxxqzgy1vljns0qfyv7d76lqgdgdbfbrd91kb5x7jlg0fw2r4f3kml0v8xmv545xr"; }; }; - "uc-first-array-1.1.8" = { - name = "uc-first-array"; - packageName = "uc-first-array"; - version = "1.1.8"; - src = fetchurl { - url = "https://registry.npmjs.org/uc-first-array/-/uc-first-array-1.1.8.tgz"; - sha512 = "3gmz15f5f5yn43v5gv1039pkhd3wwwjfd9jd4f501qz01bdlxj5f2vkg4ddy0lv4h7902n2hgw2vdlmc4a578hsr2bij1xzq5pjfc1d"; - }; - }; - "uc.micro-1.0.3" = { + "uc.micro-1.0.5" = { name = "uc.micro"; packageName = "uc.micro"; - version = "1.0.3"; + version = "1.0.5"; src = fetchurl { - url = "https://registry.npmjs.org/uc.micro/-/uc.micro-1.0.3.tgz"; - sha1 = "7ed50d5e0f9a9fb0a573379259f2a77458d50192"; + url = "https://registry.npmjs.org/uc.micro/-/uc.micro-1.0.5.tgz"; + sha512 = "0pb6n8f5qpdf3x1bgxlcvimha0n4xx3mgr1mj6nx6yksgg9ij62ai3nzhyy8806gfkklfk8blhlhimw0237yg9xr66rmgvk1vici0i6"; }; }; - "ucfirst-1.0.0" = { - name = "ucfirst"; - packageName = "ucfirst"; - version = "1.0.0"; + "uglify-es-3.3.10" = { + name = "uglify-es"; + packageName = "uglify-es"; + version = "3.3.10"; src = fetchurl { - url = "https://registry.npmjs.org/ucfirst/-/ucfirst-1.0.0.tgz"; - sha1 = "4e105b6448d05e264ecec435e0b919363c5f2f2f"; + url = "https://registry.npmjs.org/uglify-es/-/uglify-es-3.3.10.tgz"; + sha512 = "31s7k004qjdb42cavkpgszzvz9zm3aw2iv80k1hrykx202x9wb03451l58fhlba1spjgpdq96w7vm6rvavkcwrxj87aynxkq25czz5c"; }; }; "uglify-js-1.2.5" = { @@ -25117,22 +25450,22 @@ let sha1 = "29c5733148057bb4e1f75df35b7a9cb72e6a59dd"; }; }; - "uglify-js-3.0.20" = { + "uglify-js-3.3.12" = { name = "uglify-js"; packageName = "uglify-js"; - version = "3.0.20"; + version = "3.3.12"; src = fetchurl { - url = "https://registry.npmjs.org/uglify-js/-/uglify-js-3.0.20.tgz"; - sha512 = "3apvpzjbs9vds18x8pxb8ysn94658xnajl5zfagr23xpbfhgbmlmajm0lnmz9h4jk99snzf51vcc1r0l0g4gmbdzcn574vvvzy3dxrv"; + url = "https://registry.npmjs.org/uglify-js/-/uglify-js-3.3.12.tgz"; + sha512 = "166ccv37fz5bsnwpp0n0xqxx63pdg8d4hxhac79k61n47l69mcw7sp5g3c68y98x867da1w1bnv5ryisvsjsj639sbpdl2mg56nng72"; }; }; - "uglify-js-3.3.8" = { + "uglify-js-3.3.6" = { name = "uglify-js"; packageName = "uglify-js"; - version = "3.3.8"; + version = "3.3.6"; src = fetchurl { - url = "https://registry.npmjs.org/uglify-js/-/uglify-js-3.3.8.tgz"; - sha512 = "1vxvyq08n6jidg18kiph7m0bjzr4v1dh188b7zgj60mkv4x1qkqrgc8756drldaj3awmn71mwsxja0zhvdm8nqqw5finrajv8dc0j2z"; + url = "https://registry.npmjs.org/uglify-js/-/uglify-js-3.3.6.tgz"; + sha512 = "0q2bfk5m49af6f84q1iyrmw0p6ra1gnaf1npffadjqxd9qsz324r144bwgrnchngvlcdj1zqbmyh1r6gva65zxbrxm89ibdgcs7nykl"; }; }; "uglify-to-browserify-1.0.2" = { @@ -25153,6 +25486,15 @@ let sha1 = "b951f4abb6bd617e66f63eb891498e391763e309"; }; }; + "uglifyjs-webpack-plugin-1.2.2" = { + name = "uglifyjs-webpack-plugin"; + packageName = "uglifyjs-webpack-plugin"; + version = "1.2.2"; + src = fetchurl { + url = "https://registry.npmjs.org/uglifyjs-webpack-plugin/-/uglifyjs-webpack-plugin-1.2.2.tgz"; + sha512 = "3ngk387v5rza5gly8576cr1kmqmrpvb5jp6l33ac6ps5zkra0anr722gmx29i4m6q5bj6v4gdh8jikqg7l1lf4nkc06aynz6nzwsvq8"; + }; + }; "uid-0.0.2" = { name = "uid"; packageName = "uid"; @@ -25270,13 +25612,13 @@ let sha1 = "ecca3a03e56b9af17385baac812ac83b994a962f"; }; }; - "undefsafe-2.0.1" = { + "undefsafe-2.0.2" = { name = "undefsafe"; packageName = "undefsafe"; - version = "2.0.1"; + version = "2.0.2"; src = fetchurl { - url = "https://registry.npmjs.org/undefsafe/-/undefsafe-2.0.1.tgz"; - sha1 = "03b2f2a16c94556e14b2edef326cd66aaf82707a"; + url = "https://registry.npmjs.org/undefsafe/-/undefsafe-2.0.2.tgz"; + sha1 = "225f6b9e0337663e0d8e7cfd686fc2836ccace76"; }; }; "underscore-1.2.1" = { @@ -25405,6 +25747,24 @@ let sha1 = "b31c5ae8254844a3a8281541ce2b04b865a734ff"; }; }; + "unique-filename-1.1.0" = { + name = "unique-filename"; + packageName = "unique-filename"; + version = "1.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/unique-filename/-/unique-filename-1.1.0.tgz"; + sha1 = "d05f2fe4032560871f30e93cbe735eea201514f3"; + }; + }; + "unique-slug-2.0.0" = { + name = "unique-slug"; + packageName = "unique-slug"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/unique-slug/-/unique-slug-2.0.0.tgz"; + sha1 = "db6676e7c7cc0629878ff196097c78855ae9f4ab"; + }; + }; "unique-stream-1.0.0" = { name = "unique-stream"; packageName = "unique-stream"; @@ -25594,6 +25954,15 @@ let sha512 = "19nv38v416yy515gbq0lvg549w1m48mg17ibl9jp6g0pzlzg6j3lzygbw3c4ia2i9vk0ij0g4fcwfvsa9snxpgdk4a7qbprnj7s4abw"; }; }; + "upath-1.0.4" = { + name = "upath"; + packageName = "upath"; + version = "1.0.4"; + src = fetchurl { + url = "https://registry.npmjs.org/upath/-/upath-1.0.4.tgz"; + sha512 = "0xw24ba88hfvwwgniyn17n26av45g1pxqf095231065l4n9dp5w3hyc7azjd8sqyix7pnfx1pmr44fzmwwazkz0ly83cp214g4qk13p"; + }; + }; "update-notifier-0.5.0" = { name = "update-notifier"; packageName = "update-notifier"; @@ -25729,13 +26098,13 @@ let sha1 = "9c70bfd8169bc1dcbf48604e0f04b8b49cde9e9f"; }; }; - "useragent-2.2.1" = { + "useragent-2.3.0" = { name = "useragent"; packageName = "useragent"; - version = "2.2.1"; + version = "2.3.0"; src = fetchurl { - url = "https://registry.npmjs.org/useragent/-/useragent-2.2.1.tgz"; - sha1 = "cf593ef4f2d175875e8bb658ea92e18a4fd06d8e"; + url = "https://registry.npmjs.org/useragent/-/useragent-2.3.0.tgz"; + sha512 = "1vqmf9ng5navlr0kvklslvzbqym47sbqblc3i74ln0hswdyd0yx86fj3cnhb2pjjyy3cqs1mq9ywkz92j5x7km2iv1g2jkfkki0f2p0"; }; }; "utf7-1.0.2" = { @@ -25909,13 +26278,13 @@ let sha512 = "0843vl1c974n8kw5kn0kvhvhwk8y8jydr0xkwwl2963xxmkw4ingk6xj9c8m48jw2i95giglxzq5aw5v5mij9kv7fzln8pxav1cr6cd"; }; }; - "uws-0.14.5" = { + "uws-9.14.0" = { name = "uws"; packageName = "uws"; - version = "0.14.5"; + version = "9.14.0"; src = fetchurl { - url = "https://registry.npmjs.org/uws/-/uws-0.14.5.tgz"; - sha1 = "67aaf33c46b2a587a5f6666d00f7691328f149dc"; + url = "https://registry.npmjs.org/uws/-/uws-9.14.0.tgz"; + sha512 = "2m9vgbpgm39qsl9dk1zzqglr29qwy1hxn3cgj0rwrr05c4hyfij3sib08i1ck21y1136ljvvr0l2nixh6g7arjip455n0zryfs37lqw"; }; }; "v8-debug-1.0.1" = { @@ -25963,13 +26332,13 @@ let sha1 = "ef1d7093a9d3287e3fce92df916f8616b23f90b4"; }; }; - "validate-npm-package-license-3.0.1" = { + "validate-npm-package-license-3.0.3" = { name = "validate-npm-package-license"; packageName = "validate-npm-package-license"; - version = "3.0.1"; + version = "3.0.3"; src = fetchurl { - url = "https://registry.npmjs.org/validate-npm-package-license/-/validate-npm-package-license-3.0.1.tgz"; - sha1 = "2804babe712ad3379459acfbe24746ab2c303fbc"; + url = "https://registry.npmjs.org/validate-npm-package-license/-/validate-npm-package-license-3.0.3.tgz"; + sha512 = "39caf21ga6s2gvpka90wdngdijarwmkix5fpgh9r94bw14fx1zfnf7j5mprgsdlh8dv0wpwxn65qn9gfwa8n3dxw3iqaj7qf994wxpb"; }; }; "validate-npm-package-name-3.0.0" = { @@ -26161,6 +26530,15 @@ let sha1 = "5c88036cf565e5df05558bfc911f8656df218884"; }; }; + "vinyl-2.1.0" = { + name = "vinyl"; + packageName = "vinyl"; + version = "2.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/vinyl/-/vinyl-2.1.0.tgz"; + sha1 = "021f9c2cf951d6b939943c89eb5ee5add4fd924c"; + }; + }; "vinyl-file-2.0.0" = { name = "vinyl-file"; packageName = "vinyl-file"; @@ -26197,13 +26575,13 @@ let sha1 = "5d7ea45bbef9e4a6ff65f95438e0a87c357d5a73"; }; }; - "voc-1.0.0" = { + "voc-1.1.0" = { name = "voc"; packageName = "voc"; - version = "1.0.0"; + version = "1.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/voc/-/voc-1.0.0.tgz"; - sha512 = "1zss1rcd373slj9qjmy4zp7ann95isbkvjlrgp2dirpazvn1sy23hgnw6p72w0mj8hcgqpxvs0ls035zmb8isilqhqqpkmya9d3234r"; + url = "https://registry.npmjs.org/voc/-/voc-1.1.0.tgz"; + sha512 = "185v1xryljbds9hw4mc8r5grclrassdi8nq30ckz4sshn4lkivjlx0jm9k25bknf6j9ggxpcybmr94kad4qq2zppjyalbl9qdvn1n3y"; }; }; "void-elements-2.0.1" = { @@ -26341,6 +26719,15 @@ let sha512 = "15gwgjh9anvzcissfhxy3gki7jxn1dy9vq5rma1sgwkbbra8wbxnvimwalgmy8anm33x56mfp492akzhs0gidwmbnadx0ck3fdq23v1"; }; }; + "webpack-3.10.0" = { + name = "webpack"; + packageName = "webpack"; + version = "3.10.0"; + src = fetchurl { + url = "https://registry.npmjs.org/webpack/-/webpack-3.10.0.tgz"; + sha512 = "0n3rl5qq259csi0x5qh12wzyaypfds5wy0zrzky19wqsa0mjibrn19fdfgbabply2l576vlj8j69nzkb23jqfy6a36xb3cwi1g4l73z"; + }; + }; "webpack-sources-1.1.0" = { name = "webpack-sources"; packageName = "webpack-sources"; @@ -26674,6 +27061,15 @@ let sha1 = "27584810891456a4171c8d0226441ade90cbcaeb"; }; }; + "worker-farm-1.5.4" = { + name = "worker-farm"; + packageName = "worker-farm"; + version = "1.5.4"; + src = fetchurl { + url = "https://registry.npmjs.org/worker-farm/-/worker-farm-1.5.4.tgz"; + sha512 = "3xic3z7f6cga2kaps1ysysq02qljwi534lziz472mvngx097xg4y0fk77qi194akp44dbl8wcinys0mjvwxcrd2rqlgsznw9fa84g11"; + }; + }; "wrap-ansi-2.1.0" = { name = "wrap-ansi"; packageName = "wrap-ansi"; @@ -26791,15 +27187,6 @@ let sha1 = "787a6154414f3c99ed83c5772153b20feb0cec32"; }; }; - "ws-1.1.1" = { - name = "ws"; - packageName = "ws"; - version = "1.1.1"; - src = fetchurl { - url = "https://registry.npmjs.org/ws/-/ws-1.1.1.tgz"; - sha1 = "082ddb6c641e85d4bb451f03d52f06eabdb1f018"; - }; - }; "ws-1.1.5" = { name = "ws"; packageName = "ws"; @@ -27007,13 +27394,13 @@ let sha1 = "69248673410b4ba42e1a6136551d2922335aa773"; }; }; - "xmlbuilder-9.0.4" = { + "xmlbuilder-9.0.7" = { name = "xmlbuilder"; packageName = "xmlbuilder"; - version = "9.0.4"; + version = "9.0.7"; src = fetchurl { - url = "https://registry.npmjs.org/xmlbuilder/-/xmlbuilder-9.0.4.tgz"; - sha1 = "519cb4ca686d005a8420d3496f3f0caeecca580f"; + url = "https://registry.npmjs.org/xmlbuilder/-/xmlbuilder-9.0.7.tgz"; + sha1 = "132ee63d2ec5565c557e20f4c22df9aca686b10d"; }; }; "xmlcreate-1.0.2" = { @@ -27170,6 +27557,15 @@ let sha1 = "6d15fba884c08679c0d77e88e7759e811e07fa41"; }; }; + "y18n-4.0.0" = { + name = "y18n"; + packageName = "y18n"; + version = "4.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/y18n/-/y18n-4.0.0.tgz"; + sha512 = "3zj75gvpcgiphxpci4ji1znykk9n4cs0aw3dd6inwdvkmxyqn2483vya70lssjwq8alspnpw88vgii21fdrcn2vmfyppzgf4mkvzm5g"; + }; + }; "yallist-2.1.2" = { name = "yallist"; packageName = "yallist"; @@ -27472,7 +27868,7 @@ in sources."source-map-0.5.7" ]; }) - (sources."babel-generator-6.26.0" // { + (sources."babel-generator-6.26.1" // { dependencies = [ sources."source-map-0.5.7" ]; @@ -27487,11 +27883,11 @@ in sources."babylon-6.18.0" sources."balanced-match-1.0.0" sources."bindings-1.2.1" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."chalk-1.1.3" sources."chmodr-1.0.2" sources."colors-1.1.2" - sources."commander-2.13.0" + sources."commander-2.14.1" sources."concat-map-0.0.1" sources."convert-source-map-1.5.1" sources."core-js-2.5.3" @@ -27517,10 +27913,10 @@ in sources."home-or-tmp-2.0.0" sources."homedir-polyfill-1.0.1" sources."ini-1.3.5" - sources."invariant-2.2.2" + sources."invariant-2.2.3" sources."is-3.2.1" sources."is-finite-1.0.2" - sources."is-windows-1.0.1" + sources."is-windows-1.0.2" sources."isexe-2.0.0" sources."js-tokens-3.0.2" sources."jsesc-1.3.0" @@ -27533,7 +27929,7 @@ in sources."strip-ansi-0.1.1" ]; }) - sources."lodash-4.17.4" + sources."lodash-4.17.5" sources."loose-envify-1.3.1" sources."matcher-collection-1.0.5" sources."minimatch-3.0.4" @@ -27541,7 +27937,7 @@ in sources."mkdirp-0.5.1" sources."moment-2.20.1" sources."ms-2.0.0" - sources."nan-2.8.0" + sources."nan-2.9.2" sources."node.extend-2.0.0" sources."nomnom-1.8.1" sources."number-is-nan-1.0.1" @@ -27583,10 +27979,10 @@ in asar = nodeEnv.buildNodePackage { name = "asar"; packageName = "asar"; - version = "0.14.0"; + version = "0.14.2"; src = fetchurl { - url = "https://registry.npmjs.org/asar/-/asar-0.14.0.tgz"; - sha512 = "149a2ndf9hbminr1y95b9l9p7pprrsw2j05w1mbmr0gbm07sqa6vk4x91ws7clnzc80mli1mgnw9xl5mllqfmiynjdrmss6k9zncvcp"; + url = "https://registry.npmjs.org/asar/-/asar-0.14.2.tgz"; + sha512 = "1s03v9h1823r1y95jgrdnf4b2hj56gdi879kq29lv7q59hnn530q6g32qakjj8d6lzjx52r5qvg30szdi1fkvj3zx1dgaq30k5kiakq"; }; dependencies = [ sources."abbrev-1.1.1" @@ -27600,14 +27996,14 @@ in sources."bcrypt-pbkdf-1.0.1" sources."binary-0.3.0" sources."boom-4.3.1" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."buffers-0.1.1" sources."caseless-0.12.0" sources."chainsaw-0.1.0" sources."chromium-pickle-js-0.2.0" sources."co-4.6.0" - sources."combined-stream-1.0.5" - sources."commander-2.13.0" + sources."combined-stream-1.0.6" + sources."commander-2.14.1" sources."concat-map-0.0.1" sources."core-util-is-1.0.2" (sources."cryptiles-3.1.2" // { @@ -27622,10 +28018,10 @@ in sources."ecc-jsbn-0.1.1" sources."extend-3.0.1" sources."extsprintf-1.3.0" - sources."fast-deep-equal-1.0.0" + sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."forever-agent-0.6.1" - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."fs-extra-0.26.7" sources."fs.realpath-1.0.0" sources."getpass-0.1.7" @@ -27634,7 +28030,7 @@ in sources."har-schema-2.0.0" sources."har-validator-5.0.3" sources."hawk-6.0.2" - sources."hoek-4.2.0" + sources."hoek-4.2.1" sources."http-signature-1.2.0" sources."inflight-1.0.6" sources."inherits-2.0.3" @@ -27648,8 +28044,8 @@ in sources."jsonfile-2.4.0" sources."jsprim-1.4.1" sources."klaw-1.3.1" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mkdirp-0.5.1" @@ -27682,7 +28078,7 @@ in sources."nopt-1.0.10" ]; }) - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."traverse-0.3.9" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" @@ -27708,9 +28104,10 @@ in sha1 = "e991dfa17dc5d7d91731180851fd9cbfbadf73c3"; }; dependencies = [ + sources."@types/caseless-0.12.1" sources."@types/form-data-2.2.1" - sources."@types/node-8.5.9" - sources."@types/request-2.0.13" + sources."@types/node-8.9.4" + sources."@types/request-2.47.0" sources."@types/tough-cookie-2.3.2" sources."@types/uuid-3.4.3" sources."JSV-4.0.2" @@ -27880,7 +28277,7 @@ in sources."bcrypt-pbkdf-1.0.1" sources."bl-1.1.2" sources."boom-4.3.1" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."browserify-mime-1.2.9" sources."buffer-equal-constant-time-1.0.1" sources."caller-id-0.1.0" @@ -27889,7 +28286,7 @@ in sources."clone-1.0.3" sources."co-4.6.0" sources."colors-1.1.2" - sources."combined-stream-1.0.5" + sources."combined-stream-1.0.6" sources."commander-1.0.4" sources."concat-map-0.0.1" sources."concat-stream-1.6.0" @@ -27918,12 +28315,12 @@ in sources."extend-1.2.1" sources."extsprintf-1.3.0" sources."eyes-0.1.8" - sources."fast-deep-equal-1.0.0" + sources."fast-deep-equal-1.1.0" sources."fast-json-patch-0.5.6" sources."fast-json-stable-stringify-2.0.0" sources."fibers-1.0.15" sources."forever-agent-0.6.1" - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."from-0.1.7" sources."fs.realpath-1.0.0" sources."galaxy-0.1.12" @@ -27938,7 +28335,7 @@ in sources."has-color-0.1.7" sources."hash-base-3.0.4" sources."hawk-6.0.2" - sources."hoek-4.2.0" + sources."hoek-4.2.1" sources."http-basic-2.5.1" sources."http-response-object-1.1.0" sources."http-signature-1.2.0" @@ -27946,7 +28343,8 @@ in sources."inflight-1.0.6" sources."inherits-2.0.3" sources."is-buffer-1.1.6" - sources."is-my-json-valid-2.17.1" + sources."is-my-ip-valid-1.0.0" + sources."is-my-json-valid-2.17.2" sources."is-property-1.0.2" sources."is-stream-1.1.0" sources."is-typedarray-1.0.0" @@ -27978,29 +28376,32 @@ in sources."streamline-0.4.11" ]; }) - sources."lodash-4.17.4" + sources."lodash-4.17.5" sources."map-stream-0.1.0" sources."md5.js-1.3.4" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mkdirp-0.5.1" sources."moment-2.20.1" - (sources."ms-rest-2.3.0" // { + (sources."ms-rest-2.3.1" // { dependencies = [ sources."extend-3.0.1" - sources."moment-2.18.1" sources."request-2.83.0" sources."through-2.3.8" sources."tunnel-0.0.5" ]; }) - (sources."ms-rest-azure-2.5.0" // { + (sources."ms-rest-azure-2.5.4" // { dependencies = [ - sources."adal-node-0.1.27" - sources."async-2.5.0" - sources."moment-2.18.1" + sources."@types/node-9.4.6" + (sources."adal-node-0.1.27" // { + dependencies = [ + sources."@types/node-8.9.4" + ]; + }) + sources."async-2.6.0" sources."xpath.js-1.1.0" ]; }) @@ -28052,7 +28453,7 @@ in sources."boom-2.10.1" sources."caseless-0.11.0" sources."chalk-1.1.3" - sources."commander-2.13.0" + sources."commander-2.14.1" sources."cryptiles-2.0.5" sources."extend-3.0.1" sources."form-data-1.0.1" @@ -28091,13 +28492,14 @@ in (sources."sync-request-3.0.0" // { dependencies = [ sources."caseless-0.11.0" - sources."readable-stream-2.3.3" + sources."process-nextick-args-2.0.0" + sources."readable-stream-2.3.4" sources."string_decoder-1.0.3" ]; }) sources."then-request-2.2.0" sources."through-2.3.4" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."tunnel-0.0.2" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" @@ -28167,7 +28569,7 @@ in sources."bower-endpoint-parser-0.2.1" sources."bower-json-0.6.0" sources."bower-logger-0.2.1" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."builtin-modules-1.1.1" sources."camelcase-2.1.1" sources."camelcase-keys-2.1.0" @@ -28212,7 +28614,7 @@ in sources."loud-rejection-1.6.0" sources."map-obj-1.0.1" sources."meow-3.7.0" - sources."mime-db-1.32.0" + sources."mime-db-1.33.0" sources."minimatch-3.0.4" sources."minimist-1.2.0" sources."mkdirp-0.5.1" @@ -28245,9 +28647,10 @@ in sources."signal-exit-3.0.2" sources."sort-keys-1.1.2" sources."sort-keys-length-1.0.1" - sources."spdx-correct-1.0.2" - sources."spdx-expression-parse-1.0.4" - sources."spdx-license-ids-1.2.2" + sources."spdx-correct-3.0.0" + sources."spdx-exceptions-2.1.0" + sources."spdx-expression-parse-3.0.0" + sources."spdx-license-ids-3.0.0" sources."sprintf-js-1.0.3" sources."strip-bom-2.0.0" sources."strip-indent-1.0.1" @@ -28257,7 +28660,7 @@ in ]; }) sources."trim-newlines-1.0.0" - sources."validate-npm-package-license-3.0.1" + sources."validate-npm-package-license-3.0.3" sources."wrappy-1.0.2" ]; buildInputs = globalBuildInputs; @@ -28272,27 +28675,28 @@ in browserify = nodeEnv.buildNodePackage { name = "browserify"; packageName = "browserify"; - version = "15.2.0"; + version = "16.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/browserify/-/browserify-15.2.0.tgz"; - sha512 = "353sai3zpq5rmqrw5xqkmvxpm866zpv2kiqmp90qp506vij6zvdjrk1zhlpvwmdvsyfjm07q3z2gk5z8ndx2mg55x134pmnz4a34xi0"; + url = "https://registry.npmjs.org/browserify/-/browserify-16.1.0.tgz"; + sha512 = "356pxbnfj5skk2jkc36m9qma51v9f2cf3km9rbvblhdzv1jlpdhppm0ggi42ifmq2knlfg5jcvif4pqlxfkfjrs27x3adz5s0naa14g"; }; dependencies = [ sources."@browserify/acorn5-object-spread-5.0.1" sources."JSONStream-1.3.2" sources."acorn-4.0.13" + sources."acorn-node-1.3.0" sources."array-filter-0.0.1" sources."array-map-0.0.0" sources."array-reduce-0.0.0" - sources."asn1.js-4.9.2" + sources."asn1.js-4.10.1" sources."assert-1.4.1" sources."astw-2.2.0" sources."balanced-match-1.0.0" - sources."base64-js-1.2.1" + sources."base64-js-1.2.3" sources."bn.js-4.11.8" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."brorand-1.1.0" - sources."browser-pack-6.0.3" + sources."browser-pack-6.0.4" (sources."browser-resolve-1.11.2" // { dependencies = [ sources."resolve-1.1.7" @@ -28304,19 +28708,14 @@ in sources."browserify-rsa-4.0.1" sources."browserify-sign-4.0.4" sources."browserify-zlib-0.2.0" - sources."buffer-5.0.8" + sources."buffer-5.1.0" sources."buffer-xor-1.0.3" sources."builtin-status-codes-3.0.0" sources."cached-path-relative-1.0.1" sources."cipher-base-1.0.4" sources."combine-source-map-0.8.0" sources."concat-map-0.0.1" - (sources."concat-stream-1.5.2" // { - dependencies = [ - sources."readable-stream-2.0.6" - sources."string_decoder-0.10.31" - ]; - }) + sources."concat-stream-1.6.0" sources."console-browserify-1.1.0" sources."constants-browserify-1.0.0" sources."convert-source-map-1.1.3" @@ -28335,10 +28734,10 @@ in sources."des.js-1.0.0" sources."detective-5.0.2" sources."diffie-hellman-5.0.2" - sources."domain-browser-1.1.7" + sources."domain-browser-1.2.0" sources."duplexer2-0.1.4" sources."elliptic-6.4.0" - sources."events-1.1.1" + sources."events-2.0.0" sources."evp_bytestokey-1.0.3" sources."fs.realpath-1.0.0" sources."function-bind-1.1.1" @@ -28357,6 +28756,9 @@ in (sources."insert-module-globals-7.0.1" // { dependencies = [ sources."combine-source-map-0.7.2" + sources."concat-stream-1.5.2" + sources."readable-stream-2.0.6" + sources."string_decoder-0.10.31" ]; }) sources."is-buffer-1.1.6" @@ -28378,10 +28780,9 @@ in sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mkdirp-0.5.1" - (sources."module-deps-5.0.1" // { + (sources."module-deps-6.0.0" // { dependencies = [ - sources."acorn-5.3.0" - sources."concat-stream-1.6.0" + sources."acorn-5.5.0" ]; }) sources."once-1.4.0" @@ -28401,9 +28802,13 @@ in sources."querystring-0.2.0" sources."querystring-es3-0.2.1" sources."randombytes-2.0.6" - sources."randomfill-1.0.3" + sources."randomfill-1.0.4" sources."read-only-stream-2.0.0" - sources."readable-stream-2.3.3" + (sources."readable-stream-2.3.4" // { + dependencies = [ + sources."process-nextick-args-2.0.0" + ]; + }) sources."resolve-1.5.0" sources."ripemd160-2.0.1" sources."safe-buffer-5.1.1" @@ -28421,12 +28826,16 @@ in sources."minimist-1.2.0" ]; }) - sources."syntax-error-1.3.0" + (sources."syntax-error-1.4.0" // { + dependencies = [ + sources."acorn-5.5.0" + ]; + }) sources."through-2.3.8" sources."through2-2.0.3" sources."timers-browserify-1.4.2" sources."to-arraybuffer-1.0.1" - sources."tty-browserify-0.0.0" + sources."tty-browserify-0.0.1" sources."typedarray-0.0.6" sources."umd-3.0.1" (sources."url-0.11.0" // { @@ -28456,13 +28865,13 @@ in castnow = nodeEnv.buildNodePackage { name = "castnow"; packageName = "castnow"; - version = "0.4.18"; + version = "0.6.0"; src = fetchurl { - url = "https://registry.npmjs.org/castnow/-/castnow-0.4.18.tgz"; - sha1 = "4ffd81c55f381a5aa10c637607683a196830bdd8"; + url = "https://registry.npmjs.org/castnow/-/castnow-0.6.0.tgz"; + sha512 = "01z326dk78dypwf9wyjrcr81bimbkh77cgzp54qv9230j7r7jxvd4xbsd36prrssl66ggixzwxhh6wzfqnj44ygnx3j49rf0vqxj9jp"; }; dependencies = [ - sources."addr-to-ip-port-1.4.2" + sources."addr-to-ip-port-1.4.3" sources."airplay-js-0.2.16" sources."ansi-regex-1.1.1" sources."ansi-styles-2.2.1" @@ -28480,11 +28889,11 @@ in sources."bitfield-0.1.0" sources."bittorrent-dht-6.4.2" sources."bittorrent-tracker-7.7.0" - sources."blob-to-buffer-1.2.6" + sources."blob-to-buffer-1.2.7" sources."bn.js-4.11.8" sources."bncode-0.5.3" sources."boom-0.3.8" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."buffer-alloc-unsafe-1.0.0" sources."buffer-equal-0.0.1" sources."buffer-equals-1.0.4" @@ -28504,7 +28913,7 @@ in sources."codepage-1.4.0" sources."colour-0.7.1" sources."combined-stream-0.0.7" - sources."commander-2.13.0" + sources."commander-2.14.1" sources."compact2string-1.4.0" sources."concat-map-0.0.1" sources."concat-stream-1.6.0" @@ -28568,7 +28977,7 @@ in }) sources."ip-1.1.5" sources."ip-set-1.0.1" - sources."ipaddr.js-1.5.4" + sources."ipaddr.js-1.6.0" sources."is-arrayish-0.2.1" sources."is-builtin-module-1.0.0" sources."is-finite-1.0.2" @@ -28639,7 +29048,7 @@ in sources."object-assign-4.1.1" sources."once-1.2.0" sources."parse-torrent-file-2.1.4" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."safe-buffer-5.0.1" sources."string_decoder-1.0.3" sources."thirty-two-0.0.2" @@ -28650,7 +29059,7 @@ in sources."pify-2.3.0" sources."pinkie-2.0.4" sources."pinkie-promise-2.0.1" - (sources."playerui-1.2.0" // { + (sources."playerui-1.3.0" // { dependencies = [ sources."ansi-regex-0.2.1" sources."ansi-styles-1.1.0" @@ -28661,7 +29070,7 @@ in ]; }) sources."plist-2.1.0" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."promiscuous-0.6.0" sources."protobufjs-3.8.2" sources."pump-0.3.5" @@ -28697,9 +29106,9 @@ in sources."request-2.16.6" sources."rimraf-2.6.2" sources."router-0.6.2" - sources."run-parallel-1.1.6" + sources."run-parallel-1.1.7" sources."run-series-1.1.4" - sources."rusha-0.8.12" + sources."rusha-0.8.13" sources."rx-2.5.3" sources."safe-buffer-5.1.1" sources."sax-1.2.4" @@ -28716,14 +29125,15 @@ in }) sources."single-line-log-0.4.1" sources."sntp-0.1.4" - sources."spdx-correct-1.0.2" - sources."spdx-expression-parse-1.0.4" - sources."spdx-license-ids-1.2.2" + sources."spdx-correct-3.0.0" + sources."spdx-exceptions-2.1.0" + sources."spdx-expression-parse-3.0.0" + sources."spdx-license-ids-3.0.0" sources."speedometer-0.1.4" (sources."srt2vtt-1.3.1" // { dependencies = [ sources."isarray-1.0.0" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."string_decoder-1.0.3" ]; }) @@ -28763,8 +29173,8 @@ in sources."utfx-1.0.1" sources."util-deprecate-1.0.2" sources."utp-0.0.7" - sources."validate-npm-package-license-3.0.1" - sources."voc-1.0.0" + sources."validate-npm-package-license-3.0.3" + sources."voc-1.1.0" sources."ware-1.3.0" sources."windows-no-runnable-0.0.6" sources."wordwrap-0.0.3" @@ -28773,7 +29183,7 @@ in sources."ws-1.1.5" (sources."xml2js-0.4.19" // { dependencies = [ - sources."xmlbuilder-9.0.4" + sources."xmlbuilder-9.0.7" ]; }) sources."xmlbuilder-8.2.2" @@ -28830,49 +29240,43 @@ in coinmon = nodeEnv.buildNodePackage { name = "coinmon"; packageName = "coinmon"; - version = "0.0.13"; + version = "0.0.22"; src = fetchurl { - url = "https://registry.npmjs.org/coinmon/-/coinmon-0.0.13.tgz"; - sha512 = "2q865h8b8fks806q7qhdm728xhcw684xv37fmlphqv0rdy5y7zfj9nffcnzjmlg5b2qgfrybdpp25q27pm26c4mnxl6lq7jdk7hr6f5"; + url = "https://registry.npmjs.org/coinmon/-/coinmon-0.0.22.tgz"; + sha512 = "3m2wqxac3lyi8f7hyfq4cp402194lv8mx6izc2qjvabi7s2yxhiwsj8dnam628hpbbgrjixfi37biv7g5wrykc5vha9x7dcp1nzj8i2"; }; dependencies = [ sources."ansi-regex-2.1.1" - sources."ansi-styles-2.2.1" + sources."ansi-styles-3.2.0" sources."axios-0.17.1" - sources."camelo-1.1.11" - sources."chalk-1.1.3" + sources."chalk-2.3.1" sources."cli-cursor-2.1.0" sources."cli-spinners-1.1.0" sources."cli-table2-0.2.0" sources."code-point-at-1.1.0" + sources."color-convert-1.9.1" + sources."color-name-1.1.3" sources."colors-1.1.2" - sources."commander-2.13.0" + sources."commander-2.14.1" sources."debug-3.1.0" - sources."emojic-1.1.14" - sources."emojilib-2.2.12" sources."escape-string-regexp-1.0.5" sources."follow-redirects-1.4.1" - sources."has-ansi-2.0.0" + sources."has-flag-3.0.0" sources."humanize-plus-1.8.2" sources."is-buffer-1.1.6" sources."is-fullwidth-code-point-1.0.0" - sources."iterate-object-1.3.2" sources."lodash-3.10.1" - sources."log-symbols-1.0.2" - sources."mimic-fn-1.1.0" + sources."log-symbols-2.2.0" + sources."mimic-fn-1.2.0" sources."ms-2.0.0" sources."number-is-nan-1.0.1" sources."onetime-2.0.1" - sources."ora-1.3.0" - sources."r-json-1.2.8" - sources."regex-escape-3.4.8" + sources."ora-1.4.0" sources."restore-cursor-2.0.0" sources."signal-exit-3.0.2" sources."string-width-1.0.2" sources."strip-ansi-3.0.1" - sources."supports-color-2.0.0" - sources."uc-first-array-1.1.8" - sources."ucfirst-1.0.0" + sources."supports-color-5.2.0" ]; buildInputs = globalBuildInputs; meta = { @@ -28929,7 +29333,8 @@ in sources."JSONStream-1.3.2" sources."abbrev-1.1.1" sources."accepts-1.3.4" - sources."acorn-5.3.0" + sources."acorn-5.5.0" + sources."acorn-node-1.3.0" sources."aliasify-2.1.0" sources."ansi-0.3.1" sources."ansi-escapes-1.4.0" @@ -28940,7 +29345,7 @@ in sources."array-map-0.0.0" sources."array-reduce-0.0.0" sources."asn1-0.2.3" - sources."asn1.js-4.9.2" + sources."asn1.js-4.10.1" sources."assert-1.4.1" sources."assert-plus-0.2.0" sources."astw-2.2.0" @@ -28962,9 +29367,9 @@ in sources."boom-2.10.1" sources."bplist-creator-0.0.7" sources."bplist-parser-0.1.1" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."brorand-1.1.0" - sources."browser-pack-6.0.3" + sources."browser-pack-6.0.4" (sources."browser-resolve-1.11.2" // { dependencies = [ sources."resolve-1.1.7" @@ -28972,7 +29377,6 @@ in }) (sources."browserify-14.4.0" // { dependencies = [ - sources."acorn-4.0.13" sources."isarray-1.0.0" ]; }) @@ -28983,7 +29387,7 @@ in sources."browserify-sign-4.0.4" sources."browserify-transform-tools-1.7.0" sources."browserify-zlib-0.1.4" - sources."buffer-5.0.8" + sources."buffer-5.1.0" sources."buffer-xor-1.0.3" sources."builtin-modules-1.1.1" sources."builtin-status-codes-3.0.0" @@ -28997,10 +29401,10 @@ in sources."cli-width-1.1.1" sources."code-point-at-1.1.0" sources."combine-source-map-0.8.0" - sources."combined-stream-1.0.5" - sources."commander-2.13.0" - sources."compressible-2.0.12" - sources."compression-1.7.1" + sources."combined-stream-1.0.6" + sources."commander-2.14.1" + sources."compressible-2.0.13" + sources."compression-1.7.2" sources."concat-map-0.0.1" (sources."concat-stream-1.5.2" // { dependencies = [ @@ -29027,14 +29431,14 @@ in }) (sources."cordova-js-4.2.2" // { dependencies = [ - sources."acorn-5.3.0" + sources."acorn-5.5.0" sources."isarray-0.0.1" ]; }) (sources."cordova-lib-8.0.0" // { dependencies = [ sources."acorn-4.0.13" - sources."base64-js-1.2.1" + sources."base64-js-1.2.3" sources."combine-source-map-0.7.2" sources."glob-7.1.1" sources."hash-base-2.0.2" @@ -29046,6 +29450,7 @@ in sources."base64-js-1.1.2" ]; }) + sources."process-nextick-args-2.0.0" sources."q-1.0.1" sources."qs-6.3.2" sources."shelljs-0.3.0" @@ -29167,12 +29572,13 @@ in ]; }) sources."interpret-1.1.0" - sources."ipaddr.js-1.5.2" + sources."ipaddr.js-1.6.0" sources."is-buffer-1.1.6" sources."is-builtin-module-1.0.0" sources."is-finite-1.0.2" sources."is-fullwidth-code-point-1.0.0" - sources."is-my-json-valid-2.17.1" + sources."is-my-ip-valid-1.0.0" + sources."is-my-json-valid-2.17.2" sources."is-npm-1.0.0" sources."is-obj-1.0.1" sources."is-property-1.0.2" @@ -29209,8 +29615,8 @@ in sources."methods-1.1.2" sources."miller-rabin-4.0.1" sources."mime-1.4.1" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimalistic-assert-1.0.0" sources."minimalistic-crypto-utils-1.0.1" sources."minimatch-3.0.4" @@ -29238,7 +29644,7 @@ in sources."os-homedir-1.0.2" sources."os-name-1.0.3" sources."os-tmpdir-1.0.2" - sources."osenv-0.1.4" + sources."osenv-0.1.5" sources."osx-release-1.1.0" sources."package-json-1.2.0" sources."pako-0.2.9" @@ -29260,7 +29666,7 @@ in sources."process-nextick-args-1.0.7" sources."promzard-0.3.0" sources."properties-parser-0.3.1" - sources."proxy-addr-2.0.2" + sources."proxy-addr-2.0.3" sources."public-encrypt-4.0.0" sources."punycode-1.4.1" sources."q-1.5.1" @@ -29268,15 +29674,15 @@ in sources."querystring-0.2.0" sources."querystring-es3-0.2.1" sources."randombytes-2.0.6" - sources."randomfill-1.0.3" + sources."randomfill-1.0.4" sources."range-parser-1.2.0" sources."raw-body-2.3.2" - sources."rc-1.2.4" + sources."rc-1.2.5" sources."read-1.0.7" sources."read-all-stream-3.1.0" sources."read-only-stream-2.0.0" sources."read-package-json-2.0.12" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."readline2-1.0.1" sources."rechoir-0.6.2" sources."registry-url-3.1.0" @@ -29304,9 +29710,10 @@ in sources."slide-1.1.6" sources."sntp-1.0.9" sources."source-map-0.5.7" - sources."spdx-correct-1.0.2" - sources."spdx-expression-parse-1.0.4" - sources."spdx-license-ids-1.2.2" + sources."spdx-correct-3.0.0" + sources."spdx-exceptions-2.1.0" + sources."spdx-expression-parse-3.0.0" + sources."spdx-license-ids-3.0.0" (sources."sshpk-1.13.1" // { dependencies = [ sources."assert-plus-1.0.0" @@ -29327,18 +29734,18 @@ in sources."strip-json-comments-2.0.1" sources."subarg-1.0.0" sources."supports-color-2.0.0" - sources."syntax-error-1.3.0" + sources."syntax-error-1.4.0" sources."tar-2.2.1" sources."through-2.3.8" sources."through2-2.0.3" sources."timed-out-2.0.0" sources."timers-browserify-1.4.2" sources."to-arraybuffer-1.0.1" - sources."tough-cookie-2.3.3" - sources."tty-browserify-0.0.0" + sources."tough-cookie-2.3.4" + sources."tty-browserify-0.0.1" sources."tunnel-agent-0.4.3" sources."tweetnacl-0.14.5" - sources."type-is-1.6.15" + sources."type-is-1.6.16" sources."typedarray-0.0.6" sources."umd-3.0.1" sources."underscore-1.8.3" @@ -29365,7 +29772,7 @@ in sources."utils-merge-1.0.1" sources."uuid-2.0.3" sources."valid-identifier-0.0.1" - sources."validate-npm-package-license-3.0.1" + sources."validate-npm-package-license-3.0.3" sources."validate-npm-package-name-3.0.0" sources."vary-1.1.2" sources."verror-1.10.0" @@ -29454,20 +29861,19 @@ in sources."blake2b-wasm-1.1.7" sources."body-0.1.0" sources."boom-4.3.1" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" (sources."braces-1.8.5" // { dependencies = [ sources."kind-of-4.0.0" ]; }) - sources."buffer-alloc-unsafe-1.0.0" sources."buffer-equals-1.0.4" sources."buffer-indexof-1.1.1" sources."bulk-write-stream-1.1.3" sources."bytes-3.0.0" sources."call-me-maybe-1.0.1" sources."caseless-0.12.0" - sources."chalk-2.3.0" + sources."chalk-2.3.1" sources."cli-truncate-1.1.0" sources."cliclopts-1.1.1" sources."co-4.6.0" @@ -29475,7 +29881,7 @@ in sources."color-convert-1.9.1" sources."color-name-1.1.3" sources."colors-1.1.2" - sources."combined-stream-1.0.5" + sources."combined-stream-1.0.6" sources."concat-map-0.0.1" sources."concat-stream-1.6.0" sources."connections-1.4.2" @@ -29510,18 +29916,23 @@ in sources."debug-2.6.9" ]; }) - sources."dat-log-1.1.1" - (sources."dat-node-3.5.6" // { + (sources."dat-log-1.1.1" // { + dependencies = [ + sources."process-nextick-args-1.0.7" + ]; + }) + (sources."dat-node-3.5.8" // { dependencies = [ sources."minimist-0.0.8" + sources."process-nextick-args-1.0.7" sources."pump-1.0.3" sources."unordered-set-2.0.0" sources."varint-5.0.0" ]; }) sources."dat-registry-4.0.0" - sources."dat-secret-storage-4.0.0" - sources."dat-storage-1.0.3" + sources."dat-secret-storage-4.0.1" + sources."dat-storage-1.0.4" sources."dat-swarm-defaults-1.0.0" sources."datland-swarm-defaults-1.0.2" sources."debug-3.1.0" @@ -29534,11 +29945,7 @@ in sources."thunky-0.1.0" ]; }) - (sources."dns-discovery-5.6.1" // { - dependencies = [ - sources."thunky-0.1.0" - ]; - }) + sources."dns-discovery-5.6.1" sources."dns-packet-1.3.1" sources."dns-socket-1.6.3" sources."dns-txt-2.0.2" @@ -29553,7 +29960,7 @@ in sources."extglob-0.3.2" sources."extsprintf-1.3.0" sources."eyes-0.1.8" - sources."fast-deep-equal-1.0.0" + sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."fd-read-stream-1.1.0" sources."filename-regex-2.0.1" @@ -29563,7 +29970,7 @@ in sources."for-in-1.0.2" sources."for-own-0.1.5" sources."forever-agent-0.6.1" - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."from2-2.3.0" sources."fs.realpath-1.0.0" sources."getpass-0.1.7" @@ -29573,28 +29980,24 @@ in sources."global-4.3.2" sources."har-schema-2.0.0" sources."har-validator-5.0.3" - sources."has-flag-2.0.0" + sources."has-flag-3.0.0" sources."hawk-6.0.2" - sources."hoek-4.2.0" + sources."hoek-4.2.1" sources."http-methods-0.1.0" sources."http-signature-1.2.0" - (sources."hypercore-6.12.0" // { + (sources."hypercore-6.12.2" // { dependencies = [ sources."varint-5.0.0" ]; }) sources."hypercore-protocol-6.5.2" - (sources."hyperdrive-9.12.2" // { + (sources."hyperdrive-9.12.3" // { dependencies = [ sources."varint-4.0.1" ]; }) sources."hyperdrive-http-4.2.2" - (sources."hyperdrive-network-speed-2.0.1" // { - dependencies = [ - sources."debug-2.6.9" - ]; - }) + sources."hyperdrive-network-speed-2.1.0" sources."i-0.3.6" sources."inflight-1.0.6" sources."inherits-2.0.3" @@ -29635,8 +30038,8 @@ in sources."merkle-tree-stream-3.0.3" sources."micromatch-2.3.11" sources."mime-1.6.0" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."min-document-2.19.0" sources."minimatch-3.0.4" sources."minimist-1.2.0" @@ -29644,11 +30047,11 @@ in sources."mkdirp-0.5.1" sources."ms-2.0.0" sources."multi-random-access-2.1.1" - sources."multicast-dns-6.2.2" + sources."multicast-dns-6.2.3" sources."multicb-1.2.2" sources."mute-stream-0.0.7" sources."mutexify-1.2.0" - sources."nan-2.8.0" + sources."nan-2.9.2" sources."nanoassert-1.1.0" sources."nanobus-3.3.0" sources."nanotiming-1.0.1" @@ -29675,7 +30078,7 @@ in sources."prettier-bytes-1.0.4" sources."pretty-hash-1.0.1" sources."process-0.5.2" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."progress-string-1.2.2" (sources."prompt-1.0.0" // { dependencies = [ @@ -29686,12 +30089,9 @@ in sources."pump-2.0.1" sources."punycode-1.4.1" sources."qs-6.5.1" - (sources."random-access-file-1.8.1" // { - dependencies = [ - sources."debug-2.6.9" - ]; - }) + sources."random-access-file-2.0.1" sources."random-access-memory-2.4.0" + sources."random-access-storage-1.1.1" (sources."randomatic-1.1.7" // { dependencies = [ (sources."is-number-3.0.0" // { @@ -29704,8 +30104,8 @@ in sources."randombytes-2.0.6" sources."range-parser-1.2.0" sources."read-1.0.7" - sources."readable-stream-2.3.3" - sources."recursive-watch-1.1.2" + sources."readable-stream-2.3.4" + sources."recursive-watch-1.1.3" sources."regex-cache-0.4.4" sources."remove-trailing-separator-1.1.0" sources."repeat-element-1.1.2" @@ -29713,7 +30113,7 @@ in sources."request-2.83.0" sources."revalidator-0.1.8" sources."rimraf-2.6.2" - sources."rusha-0.8.12" + sources."rusha-0.8.13" sources."safe-buffer-5.1.1" sources."signed-varint-2.0.1" sources."simple-sha1-2.1.0" @@ -29743,7 +30143,7 @@ in sources."debug-2.6.9" ]; }) - sources."supports-color-4.5.0" + sources."supports-color-5.2.0" (sources."throttle-1.0.3" // { dependencies = [ sources."debug-2.6.9" @@ -29753,7 +30153,7 @@ in sources."thunky-1.0.2" sources."to-buffer-1.1.0" sources."toiletdb-1.4.1" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."township-client-1.3.2" sources."trim-0.0.1" sources."ttl-1.3.1" @@ -29795,10 +30195,10 @@ in dhcp = nodeEnv.buildNodePackage { name = "dhcp"; packageName = "dhcp"; - version = "0.2.9"; + version = "0.2.10"; src = fetchurl { - url = "https://registry.npmjs.org/dhcp/-/dhcp-0.2.9.tgz"; - sha512 = "0xvz5ppq82s4yhrp4alp1ni696v960p9a8hycwns0bj33qjdsd2nn9h2xzpgssn9c27jbr91h9fr851rnc7sz7nd2ycblcsfy193sj0"; + url = "https://registry.npmjs.org/dhcp/-/dhcp-0.2.10.tgz"; + sha512 = "04a373cxgb6b43gzymh1z71aas9c7nx9ap9q11bsc5jgrhx9q6b9204w08qrlrmgn72kj1csiadl8zlm5031097a8paczgzi9653k3m"; }; dependencies = [ sources."minimist-1.2.0" @@ -29868,7 +30268,7 @@ in sources."fresh-0.2.4" sources."from-0.1.7" sources."hiredis-0.4.1" - sources."http-parser-js-0.4.9" + sources."http-parser-js-0.4.10" sources."inherits-2.0.3" sources."ini-1.3.5" sources."ipaddr.js-1.0.5" @@ -29887,11 +30287,11 @@ in sources."merge-descriptors-0.0.2" sources."methods-1.1.2" sources."mime-1.2.11" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimist-0.0.10" sources."ms-0.7.0" - sources."nan-2.8.0" + sources."nan-2.9.2" (sources."native-dns-git+https://github.com/okTurtles/node-dns.git#08433ec98f517eed3c6d5e47bdf62603539cd402" // { dependencies = [ sources."native-dns-packet-git+https://github.com/okTurtles/native-dns-packet.git#8bf2714c318cfe7d31bca2006385882ccbf503e4" @@ -29977,7 +30377,7 @@ in sources."docker-parse-image-3.0.1" sources."duplexify-3.5.3" sources."end-of-stream-1.4.1" - (sources."errno-0.1.6" // { + (sources."errno-0.1.7" // { dependencies = [ sources."prr-1.0.1" ]; @@ -29986,7 +30386,7 @@ in (sources."fs-blob-store-5.2.1" // { dependencies = [ sources."isarray-1.0.0" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."string_decoder-1.0.3" ]; }) @@ -29996,7 +30396,7 @@ in sources."jsonparse-0.0.5" sources."level-0.18.0" sources."level-packager-0.18.0" - sources."level-post-1.0.5" + sources."level-post-1.0.7" (sources."level-sublevel-6.6.1" // { dependencies = [ (sources."levelup-0.19.1" // { @@ -30037,7 +30437,7 @@ in dependencies = [ sources."isarray-1.0.0" sources."minimist-1.2.0" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."split2-2.2.0" sources."string_decoder-1.0.3" sources."through2-2.0.3" @@ -30046,14 +30446,14 @@ in sources."network-address-0.0.5" sources."object-assign-4.1.1" sources."once-1.4.0" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."protein-0.5.0" sources."prr-0.0.0" sources."pull-cat-1.1.11" - sources."pull-level-2.0.3" + sources."pull-level-2.0.4" sources."pull-live-1.0.1" - sources."pull-pushable-2.1.2" - sources."pull-stream-3.6.1" + sources."pull-pushable-2.2.0" + sources."pull-stream-3.6.2" sources."pull-window-2.1.4" sources."pump-1.0.3" (sources."pumpify-1.4.0" // { @@ -30076,7 +30476,7 @@ in dependencies = [ sources."bl-1.2.1" sources."isarray-1.0.0" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."string_decoder-1.0.3" ]; }) @@ -30107,10 +30507,10 @@ in elasticdump = nodeEnv.buildNodePackage { name = "elasticdump"; packageName = "elasticdump"; - version = "3.3.1"; + version = "3.3.6"; src = fetchurl { - url = "https://registry.npmjs.org/elasticdump/-/elasticdump-3.3.1.tgz"; - sha512 = "21mmlyi12vnfg5s88vh8i7jk43m69bp4qhgkch8i2qbzf9fv4hqn7b6wcxkbbdxzdvnkkpklb2xxpxi5nflwl513w08d6ykvac2ambh"; + url = "https://registry.npmjs.org/elasticdump/-/elasticdump-3.3.6.tgz"; + sha512 = "0zn9wiliz4sz4xnmcc3nks76gkaxp8q0lk0nqm1ysxczibxnh074kap87w366jnzxvzx5la0h6wdqjrm7zja307sq8g0qj265fjyky6"; }; dependencies = [ sources."JSONStream-1.3.2" @@ -30119,16 +30519,16 @@ in sources."assert-plus-1.0.0" sources."async-2.6.0" sources."asynckit-0.4.0" - sources."aws-sdk-2.187.0" + sources."aws-sdk-2.203.0" sources."aws-sign2-0.7.0" sources."aws4-1.6.0" - sources."base64-js-1.2.1" + sources."base64-js-1.2.3" sources."bcrypt-pbkdf-1.0.1" sources."boom-4.3.1" sources."buffer-4.9.1" sources."caseless-0.12.0" sources."co-4.6.0" - sources."combined-stream-1.0.5" + sources."combined-stream-1.0.6" sources."core-util-is-1.0.2" (sources."cryptiles-3.1.2" // { dependencies = [ @@ -30141,15 +30541,15 @@ in sources."events-1.1.1" sources."extend-3.0.1" sources."extsprintf-1.3.0" - sources."fast-deep-equal-1.0.0" + sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."forever-agent-0.6.1" - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."getpass-0.1.7" sources."har-schema-2.0.0" sources."har-validator-5.0.3" sources."hawk-6.0.2" - sources."hoek-4.2.0" + sources."hoek-4.2.1" sources."http-signature-1.2.0" sources."ieee754-1.1.8" sources."ini-1.3.5" @@ -30163,9 +30563,9 @@ in sources."json-stringify-safe-5.0.1" sources."jsonparse-1.3.1" sources."jsprim-1.4.1" - sources."lodash-4.17.4" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."lodash-4.17.5" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimist-0.0.10" sources."oauth-sign-0.8.2" sources."optimist-0.6.1" @@ -30184,7 +30584,7 @@ in sources."sshpk-1.13.1" sources."stringstream-0.0.5" sources."through-2.3.8" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" sources."url-0.10.3" @@ -30236,7 +30636,7 @@ in }) sources."block-stream-0.0.9" sources."boom-2.10.1" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" (sources."braces-1.8.5" // { dependencies = [ sources."kind-of-4.0.0" @@ -30251,8 +30651,8 @@ in sources."chokidar-1.6.0" sources."color-convert-1.9.1" sources."color-name-1.1.3" - sources."combined-stream-1.0.5" - sources."commander-2.13.0" + sources."combined-stream-1.0.6" + sources."commander-2.14.1" sources."concat-map-0.0.1" sources."core-util-is-1.0.2" sources."cross-spawn-4.0.0" @@ -30301,7 +30701,8 @@ in sources."is-extendable-0.1.1" sources."is-extglob-1.0.0" sources."is-glob-2.0.1" - sources."is-my-json-valid-2.17.1" + sources."is-my-ip-valid-1.0.0" + sources."is-my-json-valid-2.17.2" sources."is-number-2.1.0" sources."is-posix-bracket-0.1.1" sources."is-primitive-2.0.0" @@ -30326,13 +30727,13 @@ in sources."lodash-4.13.1" sources."lru-cache-4.1.1" sources."micromatch-2.3.11" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimatch-3.0.4" sources."minimist-1.2.0" sources."mkdirp-0.5.1" sources."murmur-hash-js-1.0.0" - sources."nan-2.8.0" + sources."nan-2.9.2" (sources."node-elm-compiler-4.3.3" // { dependencies = [ sources."firstline-1.2.0" @@ -30350,7 +30751,7 @@ in sources."pinkie-2.0.4" sources."pinkie-promise-2.0.1" sources."preserve-0.2.0" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."pseudomap-1.0.2" sources."punycode-1.4.1" sources."qs-6.3.2" @@ -30363,7 +30764,7 @@ in }) ]; }) - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."readdirp-2.1.0" sources."regex-cache-0.4.4" sources."remove-trailing-separator-1.1.0" @@ -30387,7 +30788,7 @@ in sources."tar-2.2.1" sources."temp-0.8.3" sources."through-2.3.8" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."tunnel-agent-0.4.3" sources."tweetnacl-0.14.5" sources."util-deprecate-1.0.2" @@ -30427,7 +30828,7 @@ in sources."auto-bind-1.2.0" sources."babel-code-frame-6.26.0" sources."babel-core-6.26.0" - sources."babel-generator-6.26.0" + sources."babel-generator-6.26.1" sources."babel-helper-builder-react-jsx-6.26.0" sources."babel-helpers-6.24.1" sources."babel-messages-6.23.0" @@ -30443,7 +30844,7 @@ in sources."babel-types-6.26.0" sources."babylon-6.18.0" sources."balanced-match-1.0.0" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."builtin-modules-1.1.1" sources."caller-callsite-2.0.0" sources."caller-path-2.0.0" @@ -30452,7 +30853,7 @@ in sources."camelcase-keys-2.1.0" sources."chalk-1.1.3" sources."cli-cursor-2.1.0" - sources."clipboardy-1.2.2" + sources."clipboardy-1.2.3" sources."color-convert-1.9.1" sources."color-name-1.1.3" sources."concat-map-0.0.1" @@ -30481,8 +30882,8 @@ in sources."got-7.1.0" sources."graceful-fs-4.1.11" sources."has-ansi-3.0.0" - sources."has-flag-2.0.0" - sources."has-symbol-support-x-1.4.1" + sources."has-flag-3.0.0" + sources."has-symbol-support-x-1.4.2" sources."has-to-string-tag-x-1.4.1" sources."home-or-tmp-2.0.0" sources."hosted-git-info-2.5.0" @@ -30498,14 +30899,14 @@ in (sources."ink-0.3.1" // { dependencies = [ sources."ansi-styles-3.2.0" - sources."chalk-2.3.0" + sources."chalk-2.3.1" sources."core-js-1.2.7" sources."strip-ansi-4.0.0" - sources."supports-color-4.5.0" + sources."supports-color-5.2.0" ]; }) sources."ink-text-input-1.1.1" - sources."invariant-2.2.2" + sources."invariant-2.2.3" sources."is-arrayish-0.2.1" sources."is-builtin-module-1.0.0" sources."is-finite-1.0.2" @@ -30524,7 +30925,7 @@ in sources."json5-0.5.1" sources."load-json-file-1.1.0" sources."locate-path-2.0.0" - sources."lodash-4.17.4" + sources."lodash-4.17.5" sources."lodash.debounce-4.0.8" sources."lodash.flattendeep-4.4.0" sources."lodash.isequal-4.5.0" @@ -30533,7 +30934,7 @@ in sources."loud-rejection-1.6.0" sources."lowercase-keys-1.0.0" sources."lru-cache-4.1.1" - sources."make-dir-1.1.0" + sources."make-dir-1.2.0" sources."map-obj-1.0.1" sources."mem-1.1.0" (sources."meow-3.7.0" // { @@ -30545,7 +30946,7 @@ in sources."pify-2.3.0" ]; }) - sources."mimic-fn-1.1.0" + sources."mimic-fn-1.2.0" sources."mimic-response-1.0.0" sources."minimatch-3.0.4" sources."minimist-0.0.8" @@ -30577,7 +30978,7 @@ in sources."prepend-http-1.0.4" sources."private-0.1.8" sources."promise-7.3.1" - sources."prop-types-15.6.0" + sources."prop-types-15.6.1" sources."pseudomap-1.0.2" sources."read-pkg-1.1.0" sources."read-pkg-up-1.0.1" @@ -30597,9 +30998,10 @@ in sources."slash-1.0.0" sources."source-map-0.5.7" sources."source-map-support-0.4.18" - sources."spdx-correct-1.0.2" - sources."spdx-expression-parse-1.0.4" - sources."spdx-license-ids-1.2.2" + sources."spdx-correct-3.0.0" + sources."spdx-exceptions-2.1.0" + sources."spdx-expression-parse-3.0.0" + sources."spdx-license-ids-3.0.0" sources."string-width-2.1.1" sources."strip-ansi-3.0.1" sources."strip-bom-2.0.0" @@ -30614,7 +31016,7 @@ in sources."unicode-emoji-modifier-base-1.0.0" sources."url-parse-lax-1.0.0" sources."url-to-options-1.0.1" - sources."validate-npm-package-license-3.0.1" + sources."validate-npm-package-license-3.0.3" sources."whatwg-fetch-2.0.3" sources."which-1.3.0" sources."wrap-ansi-3.0.1" @@ -30633,24 +31035,24 @@ in eslint = nodeEnv.buildNodePackage { name = "eslint"; packageName = "eslint"; - version = "4.16.0"; + version = "4.18.1"; src = fetchurl { - url = "https://registry.npmjs.org/eslint/-/eslint-4.16.0.tgz"; - sha512 = "330nda1zwh0sqsxsfmlmhbg903gz6n9n4zy870gc2k95wrg1bc7jysfyn98nk2bd8p821xszpygp1vs1i7csapxfb3q2dp1n3hxamb1"; + url = "https://registry.npmjs.org/eslint/-/eslint-4.18.1.tgz"; + sha512 = "21i792qmqdz7dzm68ncjf4q3bi3c5kb1q103hkdp868mm9p7gd153hjzsq70mfyfx0vrjzna8x734xmpkp9himw32svf7j24jjrzx40"; }; dependencies = [ - sources."acorn-5.3.0" + sources."acorn-5.5.0" (sources."acorn-jsx-3.0.1" // { dependencies = [ sources."acorn-3.3.0" ]; }) sources."ajv-5.5.2" - sources."ajv-keywords-2.1.1" + sources."ajv-keywords-3.1.0" sources."ansi-escapes-3.0.0" sources."ansi-regex-2.1.1" sources."ansi-styles-2.2.1" - sources."argparse-1.0.9" + sources."argparse-1.0.10" sources."array-union-1.0.2" sources."array-uniq-1.0.3" sources."arrify-1.0.1" @@ -30661,13 +31063,13 @@ in ]; }) sources."balanced-match-1.0.0" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."caller-path-0.1.0" sources."callsites-0.2.0" - (sources."chalk-2.3.0" // { + (sources."chalk-2.3.1" // { dependencies = [ sources."ansi-styles-3.2.0" - sources."supports-color-4.5.0" + sources."supports-color-5.2.0" ]; }) sources."chardet-0.4.2" @@ -30688,14 +31090,14 @@ in sources."escape-string-regexp-1.0.5" sources."eslint-scope-3.7.1" sources."eslint-visitor-keys-1.0.0" - sources."espree-3.5.2" + sources."espree-3.5.3" sources."esprima-4.0.0" sources."esquery-1.0.0" - sources."esrecurse-4.2.0" + sources."esrecurse-4.2.1" sources."estraverse-4.2.0" sources."esutils-2.0.2" sources."external-editor-2.1.0" - sources."fast-deep-equal-1.0.0" + sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."fast-levenshtein-2.0.6" sources."figures-2.0.0" @@ -30704,11 +31106,11 @@ in sources."fs.realpath-1.0.0" sources."functional-red-black-tree-1.0.1" sources."glob-7.1.2" - sources."globals-11.2.0" + sources."globals-11.3.0" sources."globby-5.0.0" sources."graceful-fs-4.1.11" sources."has-ansi-2.0.0" - sources."has-flag-2.0.0" + sources."has-flag-3.0.0" sources."iconv-lite-0.4.19" sources."ignore-3.3.7" sources."imurmurhash-0.1.4" @@ -30728,9 +31130,9 @@ in sources."json-schema-traverse-0.3.1" sources."json-stable-stringify-without-jsonify-1.0.1" sources."levn-0.3.0" - sources."lodash-4.17.4" + sources."lodash-4.17.5" sources."lru-cache-4.1.1" - sources."mimic-fn-1.1.0" + sources."mimic-fn-1.2.0" sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mkdirp-0.5.1" @@ -30749,10 +31151,10 @@ in sources."pinkie-promise-2.0.1" sources."pluralize-7.0.0" sources."prelude-ls-1.1.2" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."progress-2.0.0" sources."pseudomap-1.0.2" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."require-uncached-1.0.3" sources."resolve-from-1.0.1" sources."restore-cursor-2.0.0" @@ -30776,7 +31178,11 @@ in }) sources."strip-json-comments-2.0.1" sources."supports-color-2.0.0" - sources."table-4.0.2" + (sources."table-4.0.3" // { + dependencies = [ + sources."ajv-6.2.0" + ]; + }) sources."text-table-0.2.0" sources."through-2.3.8" sources."tmp-0.0.33" @@ -30807,18 +31213,18 @@ in sha512 = "32h5278qn4pnlm2wl573mhg112diqpiazr07vxj0la2qwc3a1dlva5gsbyypnbnsis7r05kcx173qhb4wdl9w8spc7g3zk1575ciirc"; }; dependencies = [ - sources."acorn-5.3.0" + sources."acorn-5.5.0" (sources."acorn-jsx-3.0.1" // { dependencies = [ sources."acorn-3.3.0" ]; }) sources."ajv-5.5.2" - sources."ajv-keywords-2.1.1" + sources."ajv-keywords-3.1.0" sources."ansi-escapes-3.0.0" sources."ansi-regex-2.1.1" sources."ansi-styles-2.2.1" - sources."argparse-1.0.9" + sources."argparse-1.0.10" sources."array-union-1.0.2" sources."array-uniq-1.0.3" sources."arrify-1.0.1" @@ -30829,7 +31235,7 @@ in ]; }) sources."balanced-match-1.0.0" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."caller-path-0.1.0" sources."callsites-0.2.0" (sources."chalk-1.1.3" // { @@ -30853,13 +31259,13 @@ in sources."del-2.2.2" sources."doctrine-2.1.0" sources."escape-string-regexp-1.0.5" - (sources."eslint-4.16.0" // { + (sources."eslint-4.18.1" // { dependencies = [ sources."ansi-regex-3.0.0" sources."ansi-styles-3.2.0" - (sources."chalk-2.3.0" // { + (sources."chalk-2.3.1" // { dependencies = [ - sources."supports-color-4.5.0" + sources."supports-color-5.2.0" ]; }) sources."strip-ansi-4.0.0" @@ -30868,14 +31274,14 @@ in }) sources."eslint-scope-3.7.1" sources."eslint-visitor-keys-1.0.0" - sources."espree-3.5.2" + sources."espree-3.5.3" sources."esprima-4.0.0" sources."esquery-1.0.0" - sources."esrecurse-4.2.0" + sources."esrecurse-4.2.1" sources."estraverse-4.2.0" sources."esutils-2.0.2" sources."external-editor-2.1.0" - sources."fast-deep-equal-1.0.0" + sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."fast-levenshtein-2.0.6" sources."figures-2.0.0" @@ -30884,11 +31290,11 @@ in sources."fs.realpath-1.0.0" sources."functional-red-black-tree-1.0.1" sources."glob-7.1.2" - sources."globals-11.2.0" + sources."globals-11.3.0" sources."globby-5.0.0" sources."graceful-fs-4.1.11" sources."has-ansi-2.0.0" - sources."has-flag-2.0.0" + sources."has-flag-3.0.0" sources."iconv-lite-0.4.19" sources."ignore-3.3.7" sources."imurmurhash-0.1.4" @@ -30908,9 +31314,9 @@ in sources."json-schema-traverse-0.3.1" sources."json-stable-stringify-without-jsonify-1.0.1" sources."levn-0.3.0" - sources."lodash-4.17.4" + sources."lodash-4.17.5" sources."lru-cache-4.1.1" - sources."mimic-fn-1.1.0" + sources."mimic-fn-1.2.0" sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mkdirp-0.5.1" @@ -30930,10 +31336,10 @@ in sources."pinkie-promise-2.0.1" sources."pluralize-7.0.0" sources."prelude-ls-1.1.2" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."progress-2.0.0" sources."pseudomap-1.0.2" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."require-uncached-1.0.3" sources."resolve-1.5.0" sources."resolve-from-1.0.1" @@ -30958,7 +31364,11 @@ in sources."has-flag-1.0.0" ]; }) - sources."table-4.0.2" + (sources."table-4.0.3" // { + dependencies = [ + sources."ajv-6.2.0" + ]; + }) sources."text-table-0.2.0" sources."through-2.3.8" sources."tmp-0.0.33" @@ -31025,7 +31435,9 @@ in sources."cli-cursor-1.0.2" sources."cli-spinners-1.1.0" sources."co-4.6.0" - sources."combined-stream-1.0.5" + sources."color-convert-1.9.1" + sources."color-name-1.1.3" + sources."combined-stream-1.0.6" sources."concat-stream-1.6.0" sources."core-util-is-1.0.2" (sources."cryptiles-3.1.2" // { @@ -31046,12 +31458,12 @@ in sources."extend-3.0.1" sources."extract-zip-1.6.6" sources."extsprintf-1.3.0" - sources."fast-deep-equal-1.0.0" + sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."fd-slicer-1.0.1" sources."find-up-1.1.2" sources."forever-agent-0.6.1" - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."fs-extra-1.0.0" sources."get-stdin-4.0.1" sources."getpass-0.1.7" @@ -31059,9 +31471,10 @@ in sources."har-schema-2.0.0" sources."har-validator-5.0.3" sources."has-ansi-2.0.0" + sources."has-flag-3.0.0" sources."hasha-2.2.0" sources."hawk-6.0.2" - sources."hoek-4.2.0" + sources."hoek-4.2.1" sources."hosted-git-info-2.5.0" sources."http-signature-1.2.0" sources."indent-string-2.1.0" @@ -31084,14 +31497,14 @@ in sources."kew-0.7.0" sources."klaw-1.3.1" sources."load-json-file-1.1.0" - sources."log-symbols-1.0.2" + sources."log-symbols-2.2.0" sources."log-update-1.0.2" sources."loud-rejection-1.6.0" sources."map-obj-1.0.1" sources."meow-3.7.0" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" - sources."mimic-fn-1.1.0" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" + sources."mimic-fn-1.2.0" sources."minimist-1.2.0" sources."mkdirp-0.5.0" sources."mkpath-1.0.0" @@ -31102,11 +31515,14 @@ in sources."oauth-sign-0.8.2" sources."object-assign-4.1.1" sources."onetime-1.1.0" - (sources."ora-1.3.0" // { + (sources."ora-1.4.0" // { dependencies = [ + sources."ansi-styles-3.2.0" + sources."chalk-2.3.1" sources."cli-cursor-2.1.0" sources."onetime-2.0.1" sources."restore-cursor-2.0.0" + sources."supports-color-5.2.0" ]; }) sources."os-tmpdir-1.0.2" @@ -31123,14 +31539,14 @@ in sources."pify-2.3.0" sources."pinkie-2.0.4" sources."pinkie-promise-2.0.1" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."progress-1.1.8" sources."promise-phantom-3.1.6" sources."punycode-1.4.1" sources."qs-6.5.1" sources."read-pkg-1.1.0" sources."read-pkg-up-1.0.1" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."redent-1.0.0" sources."repeating-2.0.1" sources."request-2.83.0" @@ -31140,9 +31556,10 @@ in sources."semver-5.5.0" sources."signal-exit-3.0.2" sources."sntp-2.1.0" - sources."spdx-correct-1.0.2" - sources."spdx-expression-parse-1.0.4" - sources."spdx-license-ids-1.2.2" + sources."spdx-correct-3.0.0" + sources."spdx-exceptions-2.1.0" + sources."spdx-expression-parse-3.0.0" + sources."spdx-license-ids-3.0.0" sources."sshpk-1.13.1" sources."string_decoder-1.0.3" sources."stringstream-0.0.5" @@ -31152,14 +31569,14 @@ in sources."supports-color-2.0.0" sources."throttleit-1.0.0" sources."tmp-0.0.31" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."trim-newlines-1.0.0" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" sources."typedarray-0.0.6" sources."util-deprecate-1.0.2" sources."uuid-3.2.1" - sources."validate-npm-package-license-3.0.1" + sources."validate-npm-package-license-3.0.3" sources."verror-1.10.0" sources."which-1.3.0" sources."yauzl-2.4.1" @@ -31217,7 +31634,7 @@ in sources."async-each-1.0.1" sources."balanced-match-1.0.0" sources."binary-extensions-1.11.0" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" (sources."braces-1.8.5" // { dependencies = [ sources."kind-of-4.0.0" @@ -31292,7 +31709,7 @@ in sources."minimist-0.0.10" sources."mkdirp-0.5.1" sources."mute-stream-0.0.7" - sources."nan-2.8.0" + sources."nan-2.9.2" (sources."nconf-0.6.9" // { dependencies = [ sources."async-0.2.9" @@ -31316,7 +31733,7 @@ in sources."minimist-1.2.0" ]; }) - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."prompt-0.2.14" sources."ps-tree-0.0.3" (sources."randomatic-1.1.7" // { @@ -31329,7 +31746,7 @@ in ]; }) sources."read-1.0.7" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."readdirp-2.1.0" sources."regex-cache-0.4.4" sources."remove-trailing-separator-1.1.0" @@ -31377,12 +31794,12 @@ in dependencies = [ sources."async-2.6.0" sources."debug-3.1.0" - sources."lodash-4.17.4" + sources."lodash-4.17.5" sources."lodash.groupby-4.6.0" sources."microee-0.0.6" sources."minilog-3.1.0" sources."ms-2.0.0" - sources."simple-git-1.89.0" + sources."simple-git-1.91.0" sources."tabtab-git+https://github.com/mixu/node-tabtab.git" ]; buildInputs = globalBuildInputs; @@ -31397,10 +31814,10 @@ in git-standup = nodeEnv.buildNodePackage { name = "git-standup"; packageName = "git-standup"; - version = "2.1.8"; + version = "2.1.9"; src = fetchurl { - url = "https://registry.npmjs.org/git-standup/-/git-standup-2.1.8.tgz"; - sha1 = "4df13a13e9c49ba4cdbd5ad35a90457c8795e352"; + url = "https://registry.npmjs.org/git-standup/-/git-standup-2.1.9.tgz"; + sha512 = "3w5bg88z2wm9b01s7s1yy16dd1qhm44n7dg7anh0w6rigl6r81xmb9vl95imf6lnakwkrsnlw7rqr98c079m6kgribjvzfv9kbzax7r"; }; buildInputs = globalBuildInputs; meta = { @@ -31422,7 +31839,7 @@ in dependencies = [ sources."abbrev-1.1.1" sources."balanced-match-1.0.0" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."concat-map-0.0.1" sources."findup-sync-0.3.0" sources."glob-5.0.15" @@ -31499,7 +31916,7 @@ in sources."minimist-0.0.8" sources."mkdirp-0.5.1" sources."msgpack-1.0.2" - sources."nan-2.8.0" + sources."nan-2.9.2" sources."optimist-0.3.7" sources."pop-iterate-1.0.1" sources."promise-6.1.0" @@ -31529,7 +31946,7 @@ in sources."with-4.0.3" sources."wordwrap-0.0.3" sources."xml2js-0.4.19" - sources."xmlbuilder-9.0.4" + sources."xmlbuilder-9.0.7" sources."yargs-3.10.0" ]; buildInputs = globalBuildInputs; @@ -31576,10 +31993,11 @@ in ]; }) sources."beeper-1.1.1" - sources."brace-expansion-1.1.8" - (sources."braces-2.3.0" // { + sources."brace-expansion-1.1.11" + (sources."braces-2.3.1" // { dependencies = [ - sources."kind-of-3.2.2" + sources."define-property-1.0.0" + sources."extend-shallow-2.0.1" ]; }) sources."cache-base-1.0.1" @@ -31601,7 +32019,7 @@ in sources."debug-2.6.9" sources."decode-uri-component-0.2.0" sources."defaults-1.0.3" - sources."define-property-1.0.0" + sources."define-property-2.0.2" sources."deprecated-0.0.1" sources."detect-file-1.0.0" sources."duplexer2-0.0.2" @@ -31614,21 +32032,32 @@ in }) sources."expand-tilde-2.0.2" sources."extend-3.0.1" - sources."extend-shallow-2.0.1" + sources."extend-shallow-3.0.2" (sources."extglob-2.0.4" // { dependencies = [ + sources."define-property-1.0.0" + sources."extend-shallow-2.0.1" sources."kind-of-5.1.0" ]; }) sources."fancy-log-1.3.2" - sources."fill-range-4.0.0" + (sources."fill-range-4.0.0" // { + dependencies = [ + sources."kind-of-3.2.2" + ]; + }) sources."find-index-0.1.1" (sources."findup-sync-2.0.0" // { dependencies = [ sources."is-accessor-descriptor-1.0.0" sources."is-data-descriptor-1.0.0" sources."is-descriptor-1.0.2" - sources."is-extendable-1.0.1" + sources."is-extendable-0.1.1" + (sources."is-number-3.0.0" // { + dependencies = [ + sources."kind-of-3.2.2" + ]; + }) ]; }) sources."fined-1.1.0" @@ -31655,7 +32084,7 @@ in (sources."gulp-util-3.0.8" // { dependencies = [ sources."isarray-1.0.0" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."string_decoder-1.0.3" ]; }) @@ -31674,16 +32103,16 @@ in sources."is-buffer-1.1.6" sources."is-data-descriptor-1.0.0" sources."is-descriptor-1.0.2" - sources."is-extendable-1.0.1" + sources."is-extendable-0.1.1" sources."is-extglob-2.1.1" sources."is-glob-3.1.0" sources."is-number-3.0.0" - sources."is-odd-1.0.0" + sources."is-odd-2.0.0" sources."is-plain-object-2.0.4" sources."is-relative-1.0.0" sources."is-unc-path-1.0.0" sources."is-utf8-0.2.1" - sources."is-windows-1.0.1" + sources."is-windows-1.0.2" sources."isarray-0.0.1" sources."isexe-2.0.0" sources."isobject-3.0.1" @@ -31703,7 +32132,8 @@ in ]; }) sources."is-descriptor-0.1.6" - sources."is-extendable-0.1.1" + sources."is-extendable-1.0.1" + sources."is-number-4.0.0" sources."isarray-1.0.0" sources."kind-of-3.2.2" ]; @@ -31729,7 +32159,7 @@ in sources."make-iterator-1.0.0" sources."map-cache-0.2.2" sources."map-visit-1.0.0" - (sources."micromatch-3.1.5" // { + (sources."micromatch-3.1.9" // { dependencies = [ (sources."is-accessor-descriptor-0.1.6" // { dependencies = [ @@ -31742,19 +32172,16 @@ in ]; }) sources."is-descriptor-0.1.6" + sources."is-extendable-1.0.1" ]; }) sources."minimatch-2.0.10" sources."minimist-1.2.0" - sources."mixin-deep-1.3.0" + sources."mixin-deep-1.3.1" sources."mkdirp-0.5.1" sources."ms-2.0.0" sources."multipipe-0.1.2" - (sources."nanomatch-1.2.7" // { - dependencies = [ - sources."kind-of-5.1.0" - ]; - }) + sources."nanomatch-1.2.9" sources."natives-1.1.1" sources."object-assign-3.0.0" sources."object-copy-0.1.0" @@ -31774,17 +32201,19 @@ in sources."path-root-regex-0.1.2" sources."posix-character-classes-0.1.1" sources."pretty-hrtime-1.0.3" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."readable-stream-1.1.14" sources."rechoir-0.6.2" - sources."regex-not-1.0.0" + sources."regex-not-1.0.2" sources."repeat-element-1.1.2" sources."repeat-string-1.6.1" sources."replace-ext-0.0.1" sources."resolve-1.5.0" sources."resolve-dir-1.0.1" sources."resolve-url-0.2.1" + sources."ret-0.1.15" sources."safe-buffer-5.1.1" + sources."safe-regex-1.1.0" sources."semver-4.3.6" sources."sequencify-0.0.7" sources."set-getter-0.1.0" @@ -31797,10 +32226,16 @@ in sources."kind-of-5.1.0" ]; }) + sources."extend-shallow-2.0.1" + sources."is-extendable-0.1.1" sources."kind-of-4.0.0" ]; }) - sources."snapdragon-node-2.1.1" + (sources."snapdragon-node-2.1.1" // { + dependencies = [ + sources."kind-of-3.2.2" + ]; + }) sources."snapdragon-util-3.0.1" sources."source-map-0.5.7" sources."source-map-resolve-0.5.1" @@ -31812,7 +32247,7 @@ in ]; }) sources."static-extend-0.1.2" - sources."stream-consume-0.1.0" + sources."stream-consume-0.1.1" sources."string_decoder-0.10.31" sources."strip-ansi-3.0.1" sources."strip-bom-1.0.0" @@ -31821,11 +32256,7 @@ in sources."tildify-1.2.0" sources."time-stamp-1.1.0" sources."to-object-path-0.3.0" - (sources."to-regex-3.0.1" // { - dependencies = [ - sources."define-property-0.2.5" - ]; - }) + sources."to-regex-3.0.2" sources."to-regex-range-2.1.1" sources."unc-path-regex-0.1.2" (sources."union-value-1.0.0" // { @@ -31887,7 +32318,7 @@ in sha1 = "e21764eafe6429ec8dc9377b55e1ca86799704d5"; }; dependencies = [ - sources."eventemitter3-3.0.0" + sources."eventemitter3-3.0.1" sources."http-proxy-1.0.2" sources."lru-cache-2.5.2" sources."minimist-0.0.8" @@ -31913,7 +32344,7 @@ in dependencies = [ sources."async-1.4.2" sources."balanced-match-1.0.0" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" (sources."cli-0.6.6" // { dependencies = [ sources."minimatch-0.3.0" @@ -31983,15 +32414,15 @@ in html-minifier = nodeEnv.buildNodePackage { name = "html-minifier"; packageName = "html-minifier"; - version = "3.5.8"; + version = "3.5.9"; src = fetchurl { - url = "https://registry.npmjs.org/html-minifier/-/html-minifier-3.5.8.tgz"; - sha512 = "29sg4r25g8awvmlyzjip0c216bjcd0nq730jd5vihagf3vpxw070gi5nd7z7333givgislxfylv4jrxn4ngqxgnwns5lg3xy3lc6zjr"; + url = "https://registry.npmjs.org/html-minifier/-/html-minifier-3.5.9.tgz"; + sha512 = "3a2xnyzk38awjgzlkd59vsf8bk77ahyxsk7k9vg7gspl9z0v3zxgzzmix1vrz8xdfcxc00kg807z85hfqnz9wg20py4ihn9apvqx6hi"; }; dependencies = [ sources."camel-case-3.0.0" sources."clean-css-4.1.9" - sources."commander-2.12.2" + sources."commander-2.14.1" sources."he-1.1.1" sources."lower-case-1.1.4" sources."ncname-1.0.0" @@ -31999,9 +32430,8 @@ in sources."param-case-2.1.1" sources."relateurl-0.2.7" sources."source-map-0.5.7" - (sources."uglify-js-3.3.8" // { + (sources."uglify-js-3.3.12" // { dependencies = [ - sources."commander-2.13.0" sources."source-map-0.6.1" ]; }) @@ -32063,7 +32493,7 @@ in sources."bl-1.2.1" sources."body-5.1.0" sources."body-parser-1.18.2" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" (sources."braces-1.8.5" // { dependencies = [ sources."kind-of-4.0.0" @@ -32071,7 +32501,7 @@ in }) sources."buffer-crc32-0.2.13" sources."bytes-3.0.0" - sources."chalk-2.3.0" + sources."chalk-2.3.1" sources."chardet-0.4.2" sources."chokidar-1.7.0" sources."chownr-1.0.1" @@ -32080,7 +32510,7 @@ in sources."cli-width-2.2.0" sources."color-convert-1.9.1" sources."color-name-1.1.3" - sources."combined-stream-1.0.5" + sources."combined-stream-1.0.6" sources."component-emitter-1.2.1" sources."compress-commons-1.2.2" sources."concat-map-0.0.1" @@ -32122,7 +32552,7 @@ in sources."finalhandler-1.1.0" sources."for-in-1.0.2" sources."for-own-0.1.5" - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."formidable-1.1.1" sources."forwarded-0.1.2" sources."fresh-0.5.2" @@ -32133,20 +32563,20 @@ in sources."glob-base-0.3.0" sources."glob-parent-2.0.0" sources."graceful-fs-4.1.11" - sources."has-flag-2.0.0" + sources."has-flag-3.0.0" (sources."http-errors-1.6.2" // { dependencies = [ sources."depd-1.1.1" ]; }) - sources."http-parser-js-0.4.9" + sources."http-parser-js-0.4.10" sources."http-proxy-1.16.2" sources."http-proxy-middleware-0.17.4" sources."iconv-lite-0.4.19" sources."inflight-1.0.6" sources."inherits-2.0.3" sources."inquirer-3.3.0" - sources."ipaddr.js-1.5.2" + sources."ipaddr.js-1.6.0" sources."is-binary-path-1.0.1" sources."is-buffer-1.1.6" sources."is-dotfile-1.0.3" @@ -32167,7 +32597,7 @@ in sources."lazystream-1.0.0" sources."leek-0.0.24" sources."livereload-js-2.3.0" - sources."lodash-4.17.4" + sources."lodash-4.17.5" sources."lodash._baseassign-3.2.0" sources."lodash._basecopy-3.0.1" sources."lodash._bindcallback-3.0.1" @@ -32186,9 +32616,9 @@ in sources."methods-1.1.2" sources."micromatch-2.3.11" sources."mime-1.6.0" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" - sources."mimic-fn-1.1.0" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" + sources."mimic-fn-1.2.0" sources."minimatch-3.0.4" sources."minimist-1.2.0" sources."minipass-2.2.1" @@ -32196,7 +32626,7 @@ in sources."mkdirp-0.5.1" sources."ms-2.0.0" sources."mute-stream-0.0.7" - sources."nan-2.8.0" + sources."nan-2.9.2" sources."ncp-2.0.0" sources."negotiator-0.6.1" sources."netmask-1.0.6" @@ -32214,8 +32644,8 @@ in sources."path-is-absolute-1.0.1" sources."path-to-regexp-0.1.7" sources."preserve-0.2.0" - sources."process-nextick-args-1.0.7" - sources."proxy-addr-2.0.2" + sources."process-nextick-args-2.0.0" + sources."proxy-addr-2.0.3" sources."pseudomap-1.0.2" sources."qs-6.5.1" (sources."randomatic-1.1.7" // { @@ -32229,7 +32659,7 @@ in }) sources."range-parser-1.2.0" sources."raw-body-2.3.2" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."readdirp-2.1.0" sources."regex-cache-0.4.4" sources."remove-trailing-separator-1.1.0" @@ -32261,18 +32691,22 @@ in sources."string_decoder-1.0.3" sources."strip-ansi-4.0.0" sources."superagent-3.8.2" - sources."supports-color-4.5.0" - (sources."tar-4.3.0" // { + sources."supports-color-5.2.0" + (sources."tar-4.4.0" // { dependencies = [ sources."minimist-0.0.8" ]; }) sources."tar-stream-1.5.5" sources."through-2.3.8" - sources."tiny-lr-1.1.0" + (sources."tiny-lr-1.1.1" // { + dependencies = [ + sources."debug-3.1.0" + ]; + }) sources."tmp-0.0.33" sources."tslib-1.9.0" - sources."type-is-1.6.15" + sources."type-is-1.6.16" sources."ultron-1.1.1" sources."unpipe-1.0.0" sources."untildify-3.0.2" @@ -32329,10 +32763,10 @@ in sources."abbrev-1.0.9" sources."align-text-0.1.4" sources."amdefine-1.0.1" - sources."argparse-1.0.9" + sources."argparse-1.0.10" sources."async-1.5.2" sources."balanced-match-1.0.0" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."camelcase-1.2.1" sources."center-align-0.1.3" sources."cliui-2.1.0" @@ -32410,10 +32844,10 @@ in javascript-typescript-langserver = nodeEnv.buildNodePackage { name = "javascript-typescript-langserver"; packageName = "javascript-typescript-langserver"; - version = "2.5.5"; + version = "2.7.1"; src = fetchurl { - url = "https://registry.npmjs.org/javascript-typescript-langserver/-/javascript-typescript-langserver-2.5.5.tgz"; - sha512 = "080s545iykbb70x7xm0nqs6s7qs0slprxcqslpv47ffyz6gx7gb8kaa1dlk9lxvkm8pfhdyyj0f6qsx7d1ydscnnl0x1wmkzagbpmzm"; + url = "https://registry.npmjs.org/javascript-typescript-langserver/-/javascript-typescript-langserver-2.7.1.tgz"; + sha512 = "3dxj2iihfilq0dbhhrchhxqd6x9nhrjwnqkgr4gnmqk75zgnaa119p1h2vx7l0wmpqcafw0nifv02bn0g5y1wgal06a5yr6iii7dx18"; }; dependencies = [ sources."ansi-color-0.2.1" @@ -32421,15 +32855,15 @@ in sources."any-promise-1.3.0" sources."assertion-error-1.1.0" sources."balanced-match-1.0.0" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."bufrw-1.2.1" sources."chai-4.1.2" sources."chai-as-promised-7.1.1" - sources."chalk-2.3.0" + sources."chalk-2.3.1" sources."check-error-1.0.2" sources."color-convert-1.9.1" sources."color-name-1.1.3" - sources."commander-2.13.0" + sources."commander-2.14.1" sources."concat-map-0.0.1" sources."deep-eql-3.0.1" sources."deep-equal-1.0.1" @@ -32439,16 +32873,16 @@ in sources."fs.realpath-1.0.0" sources."get-func-name-2.0.0" sources."glob-7.1.2" - sources."has-flag-2.0.0" + sources."has-flag-3.0.0" sources."inflight-1.0.6" sources."inherits-2.0.3" sources."iterare-0.0.8" - (sources."jaeger-client-3.7.0" // { + (sources."jaeger-client-3.9.1" // { dependencies = [ sources."opentracing-0.13.0" ]; }) - sources."lodash-4.17.4" + sources."lodash-4.17.5" sources."long-2.4.0" sources."minimatch-3.0.4" sources."mz-2.7.0" @@ -32463,13 +32897,13 @@ in sources."semaphore-async-await-1.5.1" sources."string-similarity-1.2.0" sources."string-template-0.2.1" - sources."supports-color-4.5.0" + sources."supports-color-5.2.0" sources."symbol-observable-1.0.1" sources."thenify-3.3.0" sources."thenify-all-1.6.0" - sources."thriftrw-3.11.1" - sources."type-detect-4.0.7" - sources."typescript-2.4.2" + sources."thriftrw-3.11.2" + sources."type-detect-4.0.8" + sources."typescript-2.7.2" sources."vscode-jsonrpc-3.5.0" sources."vscode-languageserver-3.5.0" sources."vscode-languageserver-protocol-3.5.0" @@ -32528,7 +32962,7 @@ in sources."graceful-fs-4.1.11" sources."js2xmlparser-3.0.0" sources."klaw-2.0.0" - sources."marked-0.3.12" + sources."marked-0.3.17" sources."minimist-0.0.8" sources."mkdirp-0.5.1" (sources."requizzle-0.2.1" // { @@ -32561,7 +32995,7 @@ in }; dependencies = [ sources."balanced-match-1.0.0" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."cli-1.0.1" sources."concat-map-0.0.1" sources."console-browserify-1.1.0" @@ -32633,7 +33067,7 @@ in dependencies = [ sources."abbrev-1.1.1" sources."bluebird-3.5.1" - sources."commander-2.13.0" + sources."commander-2.14.1" sources."config-chain-1.1.11" sources."editorconfig-0.13.3" sources."ini-1.3.5" @@ -32658,10 +33092,10 @@ in jsonlint = nodeEnv.buildNodePackage { name = "jsonlint"; packageName = "jsonlint"; - version = "1.6.2"; + version = "1.6.3"; src = fetchurl { - url = "https://registry.npmjs.org/jsonlint/-/jsonlint-1.6.2.tgz"; - sha1 = "5737045085f55eb455c68b1ff4ebc01bd50e8830"; + url = "https://registry.npmjs.org/jsonlint/-/jsonlint-1.6.3.tgz"; + sha512 = "3f6z8yv4rp9mhcdbmvrmlvk8gdf05qbvn5fk60yq1cvjn00wsvs5i2k7p1bik8kvidsx44kv7r195asnbr8dfi04czhbvpy6crm7icc"; }; dependencies = [ sources."JSV-4.0.2" @@ -32723,15 +33157,15 @@ in json-refs = nodeEnv.buildNodePackage { name = "json-refs"; packageName = "json-refs"; - version = "3.0.3"; + version = "3.0.4"; src = fetchurl { - url = "https://registry.npmjs.org/json-refs/-/json-refs-3.0.3.tgz"; - sha512 = "3wagfrcaaj3vscma48jj349wbf838vi5fy0c02xfxd4k57qhf05mfw0i0624fvxfil9gfhx3sl35py85lfjx74hfkw6ra7kqw91p5cw"; + url = "https://registry.npmjs.org/json-refs/-/json-refs-3.0.4.tgz"; + sha512 = "1mbi99gcdrhmkr4nfhfdhwbk2ag55gajxdvzb6m1bddwdwnwn167xx12nypvbs6l0r90k9qrnwmbcbswdm18982b7a7mva27pkc2nah"; }; dependencies = [ - sources."argparse-1.0.9" + sources."argparse-1.0.10" sources."asynckit-0.4.0" - sources."combined-stream-1.0.5" + sources."combined-stream-1.0.6" sources."commander-2.11.0" sources."component-emitter-1.2.1" sources."cookiejar-2.1.1" @@ -32740,24 +33174,24 @@ in sources."delayed-stream-1.0.0" sources."esprima-4.0.0" sources."extend-3.0.1" - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."formidable-1.1.1" sources."graphlib-2.1.5" sources."inherits-2.0.3" sources."isarray-1.0.0" sources."js-yaml-3.10.0" - sources."lodash-4.17.4" + sources."lodash-4.17.5" sources."methods-1.1.2" sources."mime-1.6.0" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."ms-2.0.0" sources."native-promise-only-0.8.1" sources."path-loader-1.0.4" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."punycode-2.1.0" sources."qs-6.5.1" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."safe-buffer-5.1.1" sources."slash-1.0.0" sources."sprintf-js-1.0.3" @@ -32804,16 +33238,16 @@ in sources."camelcase-4.1.0" sources."capture-stack-trace-1.0.0" sources."caseless-0.12.0" - sources."chalk-2.3.0" + sources."chalk-2.3.1" sources."cli-boxes-1.0.0" sources."cliui-4.0.0" sources."co-4.6.0" sources."code-point-at-1.1.0" sources."color-convert-1.9.1" sources."color-name-1.1.3" - sources."combined-stream-1.0.5" - sources."compressible-2.0.12" - sources."compression-1.7.1" + sources."combined-stream-1.0.6" + sources."compressible-2.0.13" + sources."compression-1.7.2" sources."configstore-3.1.1" sources."connect-pause-0.1.1" sources."content-disposition-0.5.2" @@ -32860,12 +33294,12 @@ in }) sources."extend-3.0.1" sources."extsprintf-1.3.0" - sources."fast-deep-equal-1.0.0" + sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."finalhandler-1.1.0" sources."find-up-2.1.0" sources."forever-agent-0.6.1" - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."forwarded-0.1.2" sources."fresh-0.5.2" sources."get-caller-file-1.0.2" @@ -32876,9 +33310,9 @@ in sources."graceful-fs-4.1.11" sources."har-schema-2.0.0" sources."har-validator-5.0.3" - sources."has-flag-2.0.0" + sources."has-flag-3.0.0" sources."hawk-6.0.2" - sources."hoek-4.2.0" + sources."hoek-4.2.1" (sources."http-errors-1.6.2" // { dependencies = [ sources."depd-1.1.1" @@ -32891,7 +33325,7 @@ in sources."inherits-2.0.3" sources."ini-1.3.5" sources."invert-kv-1.0.0" - sources."ipaddr.js-1.5.2" + sources."ipaddr.js-1.6.0" sources."is-fullwidth-code-point-2.0.0" sources."is-installed-globally-0.1.0" sources."is-npm-1.0.0" @@ -32915,25 +33349,25 @@ in sources."latest-version-3.1.0" sources."lcid-1.0.0" sources."locate-path-2.0.0" - sources."lodash-4.17.4" + sources."lodash-4.17.5" sources."lodash-id-0.14.0" sources."lowdb-0.15.5" sources."lowercase-keys-1.0.0" sources."lru-cache-4.1.1" - sources."make-dir-1.1.0" + sources."make-dir-1.2.0" sources."media-typer-0.3.0" sources."mem-1.1.0" sources."merge-descriptors-1.0.1" sources."method-override-2.3.10" sources."methods-1.1.2" sources."mime-1.4.1" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" - sources."mimic-fn-1.1.0" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" + sources."mimic-fn-1.2.0" sources."minimist-1.2.0" sources."morgan-1.9.0" sources."ms-2.0.0" - sources."nanoid-1.0.1" + sources."nanoid-1.0.2" sources."negotiator-0.6.1" sources."npm-run-path-2.0.2" sources."number-is-nan-1.0.1" @@ -32957,14 +33391,14 @@ in sources."please-upgrade-node-3.0.1" sources."pluralize-7.0.0" sources."prepend-http-1.0.4" - sources."proxy-addr-2.0.2" + sources."proxy-addr-2.0.3" sources."pseudomap-1.0.2" sources."punycode-1.4.1" sources."qs-6.5.1" sources."range-parser-1.2.0" sources."raw-body-2.3.2" - sources."rc-1.2.4" - sources."registry-auth-token-3.3.1" + sources."rc-1.2.5" + sources."registry-auth-token-3.3.2" sources."registry-url-3.1.0" sources."request-2.83.0" sources."require-directory-2.1.1" @@ -32989,13 +33423,13 @@ in sources."strip-ansi-4.0.0" sources."strip-eof-1.0.0" sources."strip-json-comments-2.0.1" - sources."supports-color-4.5.0" + sources."supports-color-5.2.0" sources."term-size-1.2.0" sources."timed-out-4.0.1" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" - sources."type-is-1.6.15" + sources."type-is-1.6.16" sources."unique-string-1.0.0" sources."unpipe-1.0.0" sources."unzip-response-2.0.1" @@ -33044,7 +33478,7 @@ in sha512 = "0h26sq1bwxc45bm0hvlcadrbk4bizzaw729wvw690ya7mpys45bqfzdqwhjkdrnq0i44dzxckykz4bix22jfdyfg1asybg3yzczjsrv"; }; dependencies = [ - sources."argparse-1.0.9" + sources."argparse-1.0.10" sources."esprima-4.0.0" sources."sprintf-js-1.0.3" ]; @@ -33067,8 +33501,9 @@ in }; dependencies = [ sources."JSONStream-1.3.2" - sources."accepts-1.3.3" + sources."accepts-1.3.4" sources."acorn-4.0.13" + sources."acorn-node-1.3.0" sources."addressparser-1.0.1" sources."after-0.8.2" sources."agent-base-2.1.1" @@ -33090,10 +33525,10 @@ in sources."array-unique-0.2.1" sources."arraybuffer.slice-0.0.7" sources."asn1-0.2.3" - sources."asn1.js-4.9.2" + sources."asn1.js-4.10.1" sources."assert-1.4.1" sources."assert-plus-1.0.0" - sources."ast-types-0.10.1" + sources."ast-types-0.11.2" sources."astw-2.2.0" sources."async-2.1.5" sources."async-each-1.0.1" @@ -33110,7 +33545,7 @@ in sources."backo2-1.0.2" sources."balanced-match-1.0.0" sources."base64-arraybuffer-0.1.5" - sources."base64-js-1.2.1" + sources."base64-js-1.2.3" sources."base64id-1.0.0" sources."bcrypt-pbkdf-1.0.1" sources."better-assert-1.0.2" @@ -33122,14 +33557,14 @@ in sources."bn.js-4.11.8" sources."body-parser-1.18.2" sources."boom-4.3.1" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" (sources."braces-1.8.5" // { dependencies = [ sources."kind-of-4.0.0" ]; }) sources."brorand-1.1.0" - sources."browser-pack-6.0.3" + sources."browser-pack-6.0.4" (sources."browser-resolve-1.11.2" // { dependencies = [ sources."resolve-1.1.7" @@ -33137,10 +33572,11 @@ in }) (sources."browserify-14.5.0" // { dependencies = [ - sources."acorn-5.3.0" + sources."acorn-5.5.0" sources."combine-source-map-0.7.2" sources."hash-base-2.0.2" sources."isarray-0.0.1" + sources."process-nextick-args-2.0.0" sources."source-map-0.5.7" ]; }) @@ -33150,7 +33586,7 @@ in sources."browserify-rsa-4.0.1" sources."browserify-sign-4.0.4" sources."browserify-zlib-0.2.0" - sources."buffer-5.0.8" + sources."buffer-5.1.0" sources."buffer-more-ints-0.0.2" sources."buffer-xor-1.0.3" sources."buildmail-4.0.1" @@ -33167,8 +33603,8 @@ in sources."colors-1.1.2" sources."combine-lists-1.0.1" sources."combine-source-map-0.8.0" - sources."combined-stream-1.0.5" - sources."commander-2.13.0" + sources."combined-stream-1.0.6" + sources."commander-2.14.1" sources."component-bind-1.0.0" sources."component-emitter-1.2.1" sources."component-inherit-0.0.3" @@ -33179,7 +33615,7 @@ in sources."string_decoder-0.10.31" ]; }) - (sources."connect-3.6.5" // { + (sources."connect-3.6.6" // { dependencies = [ sources."statuses-1.3.1" ]; @@ -33224,13 +33660,21 @@ in sources."ee-first-1.1.1" sources."elliptic-6.4.0" sources."encodeurl-1.0.2" - sources."engine.io-3.1.4" - sources."engine.io-client-3.1.4" + (sources."engine.io-3.1.5" // { + dependencies = [ + sources."debug-3.1.0" + ]; + }) + (sources."engine.io-client-3.1.5" // { + dependencies = [ + sources."debug-3.1.0" + ]; + }) sources."engine.io-parser-2.1.2" sources."ent-2.2.0" sources."escape-html-1.0.3" sources."escape-string-regexp-1.0.5" - sources."escodegen-1.9.0" + sources."escodegen-1.9.1" sources."esprima-3.1.3" sources."estraverse-4.2.0" sources."esutils-2.0.2" @@ -33250,18 +33694,18 @@ in sources."extend-3.0.1" sources."extglob-0.3.2" sources."extsprintf-1.3.0" - sources."fast-deep-equal-1.0.0" + sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."fast-levenshtein-2.0.6" sources."file-uri-to-path-1.0.0" sources."filename-regex-2.0.1" sources."fill-range-2.2.3" - sources."finalhandler-1.0.6" + sources."finalhandler-1.1.0" sources."follow-redirects-1.0.0" sources."for-in-1.0.2" sources."for-own-0.1.5" sources."forever-agent-0.6.1" - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."fs.realpath-1.0.0" sources."fsevents-1.1.3" (sources."ftp-0.3.10" // { @@ -33289,7 +33733,7 @@ in sources."hawk-6.0.2" sources."hipchat-notifier-1.1.0" sources."hmac-drbg-1.0.1" - sources."hoek-4.2.0" + sources."hoek-4.2.1" sources."htmlescape-1.1.1" (sources."http-errors-1.6.2" // { dependencies = [ @@ -33319,7 +33763,8 @@ in sources."is-extendable-0.1.1" sources."is-extglob-1.0.0" sources."is-glob-2.0.1" - sources."is-my-json-valid-2.17.1" + sources."is-my-ip-valid-1.0.0" + sources."is-my-json-valid-2.17.2" sources."is-number-2.1.0" sources."is-posix-bracket-0.1.1" sources."is-primitive-2.0.0" @@ -33346,9 +33791,9 @@ in sources."libbase64-0.1.0" sources."libmime-3.0.0" sources."libqp-1.1.0" - sources."lodash-4.17.4" + sources."lodash-4.17.5" sources."lodash.memoize-3.0.4" - (sources."log4js-2.5.2" // { + (sources."log4js-2.5.3" // { dependencies = [ sources."assert-plus-0.2.0" sources."aws-sign2-0.6.0" @@ -33372,7 +33817,6 @@ in sources."request-2.75.0" sources."sntp-1.0.9" sources."socks-1.1.9" - sources."source-map-0.5.7" sources."string_decoder-0.10.31" sources."tunnel-agent-0.4.3" ]; @@ -33392,8 +33836,8 @@ in sources."micromatch-2.3.11" sources."miller-rabin-4.0.1" sources."mime-1.6.0" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimalistic-assert-1.0.0" sources."minimalistic-crypto-utils-1.0.1" sources."minimatch-3.0.4" @@ -33401,7 +33845,7 @@ in sources."mkdirp-0.5.1" sources."module-deps-4.1.1" sources."ms-2.0.0" - sources."nan-2.8.0" + sources."nan-2.9.2" sources."negotiator-0.6.1" sources."netmask-1.0.6" sources."node-uuid-1.4.8" @@ -33454,10 +33898,11 @@ in sources."process-0.11.10" sources."process-nextick-args-1.0.7" sources."proxy-agent-2.0.0" + sources."pseudomap-1.0.2" sources."public-encrypt-4.0.0" sources."punycode-1.4.1" sources."q-1.4.1" - sources."qjobs-1.1.5" + sources."qjobs-1.2.0" sources."qs-6.5.1" sources."querystring-0.2.0" sources."querystring-es3-0.2.1" @@ -33471,18 +33916,18 @@ in ]; }) sources."randombytes-2.0.6" - sources."randomfill-1.0.3" + sources."randomfill-1.0.4" sources."range-parser-1.2.0" sources."raw-body-2.3.2" sources."read-only-stream-2.0.0" - (sources."readable-stream-2.3.3" // { + (sources."readable-stream-2.3.4" // { dependencies = [ sources."isarray-1.0.0" ]; }) sources."readdirp-2.1.0" sources."redis-2.8.0" - sources."redis-commands-1.3.1" + sources."redis-commands-1.3.4" sources."redis-parser-2.6.0" sources."regex-cache-0.4.4" sources."remove-trailing-separator-1.1.0" @@ -33512,7 +33957,11 @@ in }) sources."socket.io-adapter-1.1.1" sources."socket.io-client-2.0.4" - sources."socket.io-parser-3.1.2" + (sources."socket.io-parser-3.1.3" // { + dependencies = [ + sources."debug-3.1.0" + ]; + }) sources."socks-1.1.10" sources."socks-proxy-agent-2.1.1" sources."source-map-0.6.1" @@ -33528,11 +33977,7 @@ in sources."strip-ansi-3.0.1" sources."subarg-1.0.0" sources."supports-color-2.0.0" - (sources."syntax-error-1.3.0" // { - dependencies = [ - sources."acorn-4.0.13" - ]; - }) + sources."syntax-error-1.4.0" sources."through-2.3.8" sources."through2-2.0.3" sources."thunkify-2.1.2" @@ -33541,13 +33986,13 @@ in sources."tmp-0.0.33" sources."to-array-0.1.4" sources."to-arraybuffer-1.0.1" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."tsscmp-1.0.5" - sources."tty-browserify-0.0.0" + sources."tty-browserify-0.0.1" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" sources."type-check-0.3.2" - sources."type-is-1.6.15" + sources."type-is-1.6.16" sources."typedarray-0.0.6" sources."ultron-1.1.1" sources."umd-3.0.1" @@ -33558,9 +34003,9 @@ in sources."punycode-1.3.2" ]; }) - (sources."useragent-2.2.1" // { + (sources."useragent-2.3.0" // { dependencies = [ - sources."lru-cache-2.2.4" + sources."lru-cache-4.1.1" ]; }) (sources."util-0.10.3" // { @@ -33571,7 +34016,7 @@ in sources."util-deprecate-1.0.2" sources."utils-merge-1.0.1" sources."uuid-3.2.1" - sources."uws-0.14.5" + sources."uws-9.14.0" sources."verror-1.10.0" sources."vm-browserify-0.0.4" sources."void-elements-2.0.1" @@ -33582,6 +34027,7 @@ in sources."xmlhttprequest-ssl-1.5.5" sources."xregexp-2.0.0" sources."xtend-4.0.1" + sources."yallist-2.1.2" sources."yeast-0.1.2" ]; buildInputs = globalBuildInputs; @@ -33611,7 +34057,7 @@ in sources."body-parser-1.13.3" sources."bytes-2.1.0" sources."commander-2.6.0" - sources."compressible-2.0.12" + sources."compressible-2.0.13" sources."compression-1.5.2" (sources."connect-2.30.2" // { dependencies = [ @@ -33677,8 +34123,8 @@ in }) sources."methods-1.1.2" sources."mime-1.3.4" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimist-0.0.8" sources."mkdirp-0.5.1" sources."morgan-1.6.1" @@ -33736,7 +34182,7 @@ in sources."stream-counter-0.2.0" sources."string_decoder-0.10.31" sources."tsscmp-1.0.5" - sources."type-is-1.6.15" + sources."type-is-1.6.16" sources."uid-safe-2.1.4" sources."uid2-0.0.3" sources."unpipe-1.0.0" @@ -33744,7 +34190,7 @@ in sources."vary-1.0.1" sources."vhost-3.0.2" sources."xml2js-0.4.19" - sources."xmlbuilder-9.0.4" + sources."xmlbuilder-9.0.7" ]; buildInputs = globalBuildInputs; meta = { @@ -33757,10 +34203,10 @@ in lerna = nodeEnv.buildNodePackage { name = "lerna"; packageName = "lerna"; - version = "2.8.0"; + version = "2.9.0"; src = fetchurl { - url = "https://registry.npmjs.org/lerna/-/lerna-2.8.0.tgz"; - sha512 = "2admd5d0lmnck38apsqbblrk0pffnq52s25bb591q8sazykcfz68kz9pn534sgazjl26p57y23758n8n7xvw0ilb9hd5ri6j34i7kxn"; + url = "https://registry.npmjs.org/lerna/-/lerna-2.9.0.tgz"; + sha512 = "18aayy3dsb36bz3rrvbmg1pfvc4zsxqmiax923v738dlp7nw68y5gndi268db91cyzjxwpdimppqfb84z9ywi79mhlak4i73flxgazh"; }; dependencies = [ sources."JSONStream-1.3.2" @@ -33776,16 +34222,17 @@ in sources."array-ify-1.0.0" sources."array-union-1.0.2" sources."array-uniq-1.0.3" + sources."arrify-1.0.1" sources."async-1.5.2" sources."balanced-match-1.0.0" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."builtin-modules-1.1.1" sources."byline-5.0.0" sources."camelcase-1.2.1" sources."camelcase-keys-2.1.0" sources."capture-stack-trace-1.0.0" sources."center-align-0.1.3" - sources."chalk-2.3.0" + sources."chalk-2.3.1" sources."chardet-0.4.2" sources."ci-info-1.1.2" sources."cli-cursor-2.1.0" @@ -33802,40 +34249,68 @@ in sources."concat-map-0.0.1" sources."concat-stream-1.6.0" sources."console-control-strings-1.1.0" - sources."conventional-changelog-1.1.7" - sources."conventional-changelog-angular-1.6.0" - sources."conventional-changelog-atom-0.1.2" - (sources."conventional-changelog-cli-1.3.5" // { + (sources."conventional-changelog-1.1.17" // { + dependencies = [ + sources."camelcase-4.1.0" + sources."map-obj-1.0.1" + sources."meow-3.7.0" + ]; + }) + sources."conventional-changelog-angular-1.6.6" + sources."conventional-changelog-atom-0.2.4" + (sources."conventional-changelog-cli-1.3.15" // { dependencies = [ sources."camelcase-2.1.1" + sources."camelcase-keys-4.2.0" sources."find-up-1.1.2" + sources."indent-string-3.2.0" sources."load-json-file-1.1.0" + sources."map-obj-2.0.0" sources."minimist-1.2.0" + sources."parse-json-4.0.0" sources."path-exists-2.1.0" + sources."path-type-1.1.0" + sources."pify-2.3.0" sources."read-pkg-1.1.0" + sources."read-pkg-up-3.0.0" + sources."redent-2.0.0" + sources."strip-bom-3.0.0" + sources."strip-indent-2.0.0" + sources."trim-newlines-2.0.0" sources."wordwrap-0.0.2" sources."yargs-3.10.0" ]; }) - sources."conventional-changelog-codemirror-0.2.1" - sources."conventional-changelog-core-1.9.5" - sources."conventional-changelog-ember-0.2.10" - sources."conventional-changelog-eslint-0.2.1" - sources."conventional-changelog-express-0.2.1" + sources."conventional-changelog-codemirror-0.3.4" + (sources."conventional-changelog-core-2.0.5" // { + dependencies = [ + sources."meow-4.0.0" + ]; + }) + sources."conventional-changelog-ember-0.3.6" + sources."conventional-changelog-eslint-1.0.4" + sources."conventional-changelog-express-0.3.4" sources."conventional-changelog-jquery-0.1.0" sources."conventional-changelog-jscs-0.1.0" - sources."conventional-changelog-jshint-0.2.1" - sources."conventional-changelog-writer-2.0.3" - sources."conventional-commits-filter-1.1.1" - sources."conventional-commits-parser-2.1.0" - sources."conventional-recommended-bump-1.1.0" + sources."conventional-changelog-jshint-0.3.4" + sources."conventional-changelog-preset-loader-1.1.6" + sources."conventional-changelog-writer-3.0.4" + sources."conventional-commits-filter-1.1.5" + sources."conventional-commits-parser-2.1.5" + (sources."conventional-recommended-bump-1.2.1" // { + dependencies = [ + sources."meow-3.7.0" + sources."minimist-1.2.0" + ]; + }) sources."core-util-is-1.0.2" sources."create-error-class-3.0.2" sources."cross-spawn-5.1.0" sources."currently-unhandled-0.4.1" sources."dargs-4.1.0" - sources."dateformat-1.0.12" + sources."dateformat-3.0.3" sources."decamelize-1.2.0" + sources."decamelize-keys-1.1.0" sources."dedent-0.7.0" sources."deep-extend-0.4.2" sources."defaults-1.0.3" @@ -33858,17 +34333,26 @@ in sources."get-port-3.2.0" sources."get-stdin-4.0.1" sources."get-stream-3.0.0" - sources."git-raw-commits-1.3.0" + (sources."git-raw-commits-1.3.4" // { + dependencies = [ + sources."read-pkg-3.0.0" + sources."read-pkg-up-3.0.0" + ]; + }) sources."git-remote-origin-url-2.0.0" - sources."git-semver-tags-1.2.3" + sources."git-semver-tags-1.3.4" sources."gitconfiglocal-1.0.0" sources."glob-7.1.2" sources."glob-parent-3.1.0" - sources."globby-6.1.0" + (sources."globby-6.1.0" // { + dependencies = [ + sources."pify-2.3.0" + ]; + }) sources."got-6.7.1" sources."graceful-fs-4.1.11" sources."handlebars-4.0.11" - sources."has-flag-2.0.0" + sources."has-flag-3.0.0" sources."has-unicode-2.0.1" sources."hosted-git-info-2.5.0" sources."iconv-lite-0.4.19" @@ -33913,12 +34397,11 @@ in (sources."load-json-file-4.0.0" // { dependencies = [ sources."parse-json-4.0.0" - sources."pify-3.0.0" sources."strip-bom-3.0.0" ]; }) sources."locate-path-2.0.0" - sources."lodash-4.17.4" + sources."lodash-4.17.5" sources."lodash._reinterpolate-3.0.0" sources."lodash.template-4.4.0" sources."lodash.templatesettings-4.1.0" @@ -33926,13 +34409,23 @@ in sources."loud-rejection-1.6.0" sources."lowercase-keys-1.0.0" sources."lru-cache-4.1.1" - sources."make-dir-1.1.0" + sources."make-dir-1.2.0" sources."map-obj-1.0.1" sources."mem-1.1.0" - sources."meow-3.7.0" - sources."mimic-fn-1.1.0" + (sources."meow-4.0.0" // { + dependencies = [ + sources."find-up-2.1.0" + sources."load-json-file-4.0.0" + sources."path-exists-3.0.0" + sources."path-type-3.0.0" + sources."pify-3.0.0" + sources."read-pkg-3.0.0" + ]; + }) + sources."mimic-fn-1.2.0" sources."minimatch-3.0.4" sources."minimist-0.0.8" + sources."minimist-options-3.0.2" sources."mkdirp-0.5.1" sources."modify-values-1.0.0" sources."moment-2.20.1" @@ -33967,26 +34460,22 @@ in sources."path-exists-3.0.0" sources."path-is-absolute-1.0.1" sources."path-key-2.0.1" - sources."path-type-1.1.0" - sources."pify-2.3.0" + sources."path-type-3.0.0" + sources."pify-3.0.0" sources."pinkie-2.0.4" sources."pinkie-promise-2.0.1" sources."prepend-http-1.0.4" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."pseudomap-1.0.2" sources."q-1.5.1" - sources."rc-1.2.4" + sources."quick-lru-1.1.0" + sources."rc-1.2.5" sources."read-cmd-shim-1.0.1" - (sources."read-pkg-3.0.0" // { - dependencies = [ - sources."path-type-3.0.0" - sources."pify-3.0.0" - ]; - }) + sources."read-pkg-3.0.0" sources."read-pkg-up-1.0.1" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."redent-1.0.0" - sources."registry-auth-token-3.3.1" + sources."registry-auth-token-3.3.2" sources."registry-url-3.1.0" sources."repeat-string-1.6.1" sources."repeating-2.0.1" @@ -34007,9 +34496,10 @@ in sources."slash-1.0.0" sources."sort-keys-2.0.0" sources."source-map-0.4.4" - sources."spdx-correct-1.0.2" - sources."spdx-expression-parse-1.0.4" - sources."spdx-license-ids-1.2.2" + sources."spdx-correct-3.0.0" + sources."spdx-exceptions-2.1.0" + sources."spdx-expression-parse-3.0.0" + sources."spdx-license-ids-3.0.0" sources."split-1.0.1" sources."split2-2.2.0" sources."string-width-2.1.1" @@ -34024,11 +34514,10 @@ in sources."minimist-0.1.0" ]; }) - sources."supports-color-4.5.0" + sources."supports-color-5.2.0" sources."temp-dir-1.0.0" (sources."temp-write-3.4.0" // { dependencies = [ - sources."pify-3.0.0" sources."uuid-3.2.1" ]; }) @@ -34052,7 +34541,7 @@ in sources."url-parse-lax-1.0.0" sources."util-deprecate-1.0.2" sources."uuid-2.0.3" - sources."validate-npm-package-license-3.0.1" + sources."validate-npm-package-license-3.0.3" sources."wcwidth-1.0.1" sources."which-1.3.0" sources."which-module-2.0.0" @@ -34062,11 +34551,7 @@ in sources."wrap-ansi-2.1.0" sources."wrappy-1.0.2" sources."write-file-atomic-2.3.0" - (sources."write-json-file-2.3.0" // { - dependencies = [ - sources."pify-3.0.0" - ]; - }) + sources."write-json-file-2.3.0" sources."write-pkg-3.1.0" sources."xtend-4.0.1" sources."y18n-3.2.1" @@ -34083,6 +34568,7 @@ in sources."is-fullwidth-code-point-1.0.0" sources."load-json-file-2.0.0" sources."path-type-2.0.0" + sources."pify-2.3.0" sources."read-pkg-2.0.0" sources."read-pkg-up-2.0.0" sources."strip-bom-3.0.0" @@ -34102,10 +34588,10 @@ in less = nodeEnv.buildNodePackage { name = "less"; packageName = "less"; - version = "2.7.3"; + version = "3.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/less/-/less-2.7.3.tgz"; - sha512 = "04jbm6adzhknlcwjjdd94n8dhqwgsg0fyampis9854jf23z9g9lxs8593908ymwldl88bjipf9b9rw6xfibb29vv7s0c44wllj4ixr8"; + url = "https://registry.npmjs.org/less/-/less-3.0.1.tgz"; + sha512 = "25qmszxk5bzrjgyy1m0k87zc1c5h19ckvnlkhl9j3ncm3zfx7rzmydj6f4sw5c7ldc4npzs41fmgd1hw113kilrk8sggwzwvfw7hi59"; }; dependencies = [ sources."ajv-4.11.8" @@ -34119,13 +34605,13 @@ in sources."boom-2.10.1" sources."caseless-0.12.0" sources."co-4.6.0" - sources."combined-stream-1.0.5" + sources."combined-stream-1.0.6" sources."core-util-is-1.0.2" sources."cryptiles-2.0.5" sources."dashdash-1.14.1" sources."delayed-stream-1.0.0" sources."ecc-jsbn-0.1.1" - sources."errno-0.1.6" + sources."errno-0.1.7" sources."extend-3.0.1" sources."extsprintf-1.3.0" sources."forever-agent-0.6.1" @@ -34151,8 +34637,8 @@ in ]; }) sources."mime-1.6.0" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimist-0.0.8" sources."mkdirp-0.5.1" sources."oauth-sign-0.8.2" @@ -34171,7 +34657,7 @@ in ]; }) sources."stringstream-0.0.5" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" sources."uuid-3.2.1" @@ -34212,24 +34698,26 @@ in lcov-result-merger = nodeEnv.buildNodePackage { name = "lcov-result-merger"; packageName = "lcov-result-merger"; - version = "1.2.0"; + version = "2.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/lcov-result-merger/-/lcov-result-merger-1.2.0.tgz"; - sha1 = "5de1e6426f885929b77357f014de5fee1dad0553"; + url = "https://registry.npmjs.org/lcov-result-merger/-/lcov-result-merger-2.0.0.tgz"; + sha512 = "1y38jkc5m8kb1ll4wcc12yikqdb2l19acc3rdjl0bhs4vjh834mz53hhgyc4jm4gya1gnmzrj3g5337xn05kkxs92vl35zdqcwxij08"; }; dependencies = [ sources."arr-diff-2.0.0" sources."arr-flatten-1.1.0" sources."array-unique-0.2.1" sources."balanced-match-1.0.0" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" (sources."braces-1.8.5" // { dependencies = [ sources."kind-of-4.0.0" ]; }) - sources."clone-1.0.3" - sources."clone-stats-0.0.1" + sources."clone-2.1.1" + sources."clone-buffer-1.0.0" + sources."clone-stats-1.0.0" + sources."cloneable-readable-1.0.0" sources."concat-map-0.0.1" sources."convert-source-map-1.5.1" sources."core-util-is-1.0.2" @@ -34295,7 +34783,7 @@ in sources."path-dirname-1.0.2" sources."path-is-absolute-1.0.1" sources."preserve-0.2.0" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" (sources."randomatic-1.1.7" // { dependencies = [ (sources."is-number-3.0.0" // { @@ -34305,12 +34793,12 @@ in }) ]; }) - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."regex-cache-0.4.4" sources."remove-trailing-separator-1.1.0" sources."repeat-element-1.1.2" sources."repeat-string-1.6.1" - sources."replace-ext-0.0.1" + sources."replace-ext-1.0.0" sources."safe-buffer-5.1.1" sources."stream-shift-1.0.0" sources."string_decoder-1.0.3" @@ -34322,13 +34810,21 @@ in sources."unique-stream-2.2.1" sources."util-deprecate-1.0.2" sources."vali-date-1.0.0" - sources."vinyl-1.2.0" + (sources."vinyl-2.1.0" // { + dependencies = [ + sources."process-nextick-args-1.0.7" + ]; + }) (sources."vinyl-fs-2.4.4" // { dependencies = [ + sources."clone-1.0.3" + sources."clone-stats-0.0.1" sources."is-extglob-1.0.0" sources."is-glob-2.0.1" sources."isarray-0.0.1" + sources."replace-ext-0.0.1" sources."string_decoder-0.10.31" + sources."vinyl-1.2.0" ]; }) sources."wrappy-1.0.2" @@ -34356,7 +34852,7 @@ in sources."after-0.8.2" sources."ajv-5.5.2" sources."anymatch-1.3.2" - sources."argparse-1.0.9" + sources."argparse-1.0.10" sources."arr-diff-2.0.0" sources."arr-flatten-1.1.0" sources."array-flatten-1.1.1" @@ -34379,7 +34875,7 @@ in sources."blob-0.0.4" sources."body-parser-1.18.2" sources."boom-4.3.1" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" (sources."braces-1.8.5" // { dependencies = [ sources."kind-of-4.0.0" @@ -34390,7 +34886,7 @@ in sources."caseless-0.12.0" sources."chokidar-1.7.0" sources."co-4.6.0" - sources."combined-stream-1.0.5" + sources."combined-stream-1.0.6" sources."component-bind-1.0.0" sources."component-emitter-1.2.1" sources."component-inherit-0.0.3" @@ -34414,8 +34910,16 @@ in sources."ee-first-1.1.1" sources."emoji-regex-6.1.1" sources."encodeurl-1.0.2" - sources."engine.io-3.1.4" - sources."engine.io-client-3.1.4" + (sources."engine.io-3.1.5" // { + dependencies = [ + sources."debug-3.1.0" + ]; + }) + (sources."engine.io-client-3.1.5" // { + dependencies = [ + sources."debug-3.1.0" + ]; + }) sources."engine.io-parser-2.1.2" sources."entities-1.1.1" sources."escape-html-1.0.3" @@ -34431,7 +34935,7 @@ in sources."extend-3.0.1" sources."extglob-0.3.2" sources."extsprintf-1.3.0" - sources."fast-deep-equal-1.0.0" + sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."filename-regex-2.0.1" sources."fill-range-2.2.3" @@ -34439,7 +34943,7 @@ in sources."for-in-1.0.2" sources."for-own-0.1.5" sources."forever-agent-0.6.1" - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."forwarded-0.1.2" sources."fresh-0.5.2" sources."fsevents-1.1.3" @@ -34453,7 +34957,7 @@ in sources."has-binary2-1.0.2" sources."has-cors-1.1.0" sources."hawk-6.0.2" - sources."hoek-4.2.0" + sources."hoek-4.2.1" sources."html-entities-1.2.1" (sources."http-errors-1.6.2" // { dependencies = [ @@ -34465,7 +34969,7 @@ in sources."indexof-0.0.1" sources."inherits-2.0.3" sources."innertext-1.0.2" - sources."ipaddr.js-1.5.2" + sources."ipaddr.js-1.6.0" sources."is-binary-path-1.0.1" sources."is-buffer-1.1.6" sources."is-dotfile-1.0.3" @@ -34488,9 +34992,9 @@ in sources."jsprim-1.4.1" sources."kind-of-3.2.2" sources."linkify-it-2.0.3" - sources."markdown-it-8.4.0" + sources."markdown-it-8.4.1" sources."markdown-it-emoji-1.4.0" - sources."markdown-it-github-headings-1.1.0" + sources."markdown-it-github-headings-1.1.1" sources."markdown-it-task-checkbox-1.0.6" sources."mdurl-1.0.1" sources."media-typer-0.3.0" @@ -34498,12 +35002,12 @@ in sources."methods-1.1.2" sources."micromatch-2.3.11" sources."mime-1.4.1" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimatch-3.0.4" sources."minimist-1.2.0" sources."ms-2.0.0" - sources."nan-2.8.0" + sources."nan-2.9.2" sources."negotiator-0.6.1" sources."normalize-path-2.1.1" sources."oauth-sign-0.8.2" @@ -34519,8 +35023,8 @@ in sources."path-to-regexp-0.1.7" sources."performance-now-2.1.0" sources."preserve-0.2.0" - sources."process-nextick-args-1.0.7" - sources."proxy-addr-2.0.2" + sources."process-nextick-args-2.0.0" + sources."proxy-addr-2.0.3" sources."punycode-1.4.1" sources."qs-6.5.1" (sources."randomatic-1.1.7" // { @@ -34534,7 +35038,7 @@ in }) sources."range-parser-1.2.0" sources."raw-body-2.3.2" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."readdirp-2.1.0" sources."regex-cache-0.4.4" sources."remove-trailing-separator-1.1.0" @@ -34549,30 +35053,33 @@ in sources."sntp-2.1.0" (sources."socket.io-2.0.4" // { dependencies = [ - sources."accepts-1.3.3" sources."isarray-2.0.1" ]; }) sources."socket.io-adapter-1.1.1" sources."socket.io-client-2.0.4" - sources."socket.io-parser-3.1.2" + (sources."socket.io-parser-3.1.3" // { + dependencies = [ + sources."debug-3.1.0" + ]; + }) sources."sprintf-js-1.0.3" sources."sshpk-1.13.1" sources."statuses-1.4.0" sources."string_decoder-1.0.3" sources."stringstream-0.0.5" sources."to-array-0.1.4" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" - sources."type-is-1.6.15" - sources."uc.micro-1.0.3" + sources."type-is-1.6.16" + sources."uc.micro-1.0.5" sources."ultron-1.1.1" sources."unpipe-1.0.0" sources."util-deprecate-1.0.2" sources."utils-merge-1.0.1" sources."uuid-3.2.1" - sources."uws-0.14.5" + sources."uws-9.14.0" sources."vary-1.1.2" sources."verror-1.10.0" sources."ws-3.3.3" @@ -34610,7 +35117,7 @@ in sources."batch-0.6.1" sources."bcryptjs-2.4.3" sources."binary-extensions-1.11.0" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" (sources."braces-1.8.5" // { dependencies = [ sources."kind-of-4.0.0" @@ -34652,7 +35159,7 @@ in sources."depd-1.1.1" ]; }) - sources."http-parser-js-0.4.9" + sources."http-parser-js-0.4.10" sources."inherits-2.0.3" sources."is-binary-path-1.0.1" sources."is-buffer-1.1.6" @@ -34671,8 +35178,8 @@ in sources."map-stream-0.1.0" sources."micromatch-2.3.11" sources."mime-1.4.1" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimatch-3.0.4" (sources."morgan-1.9.0" // { dependencies = [ @@ -34681,7 +35188,7 @@ in ]; }) sources."ms-0.7.1" - sources."nan-2.8.0" + sources."nan-2.9.2" sources."negotiator-0.6.1" sources."normalize-path-2.1.1" sources."object-assign-4.1.1" @@ -34694,7 +35201,7 @@ in sources."path-is-absolute-1.0.1" sources."pause-stream-0.0.11" sources."preserve-0.2.0" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."proxy-middleware-0.15.0" (sources."randomatic-1.1.7" // { dependencies = [ @@ -34706,17 +35213,18 @@ in ]; }) sources."range-parser-1.2.0" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."readdirp-2.1.0" sources."regex-cache-0.4.4" sources."remove-trailing-separator-1.1.0" sources."repeat-element-1.1.2" sources."repeat-string-1.6.1" sources."safe-buffer-5.1.1" - (sources."send-0.16.1" // { + (sources."send-0.16.2" // { dependencies = [ sources."debug-2.6.9" sources."ms-2.0.0" + sources."statuses-1.4.0" ]; }) (sources."serve-index-1.9.1" // { @@ -34789,14 +35297,14 @@ in mocha = nodeEnv.buildNodePackage { name = "mocha"; packageName = "mocha"; - version = "5.0.0"; + version = "5.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/mocha/-/mocha-5.0.0.tgz"; - sha512 = "3rxvm15qz9qdiyihc9pq4kc008iz89cqdqjlca43swmk3fc7bydlaqk1qyhaj19r5m8cxxrpiwxz5cwrp9im26fin4sgqdfbxs7ch5s"; + url = "https://registry.npmjs.org/mocha/-/mocha-5.0.1.tgz"; + sha512 = "2975gb84ixyiin9mdahnmpxxqmn9zmc7d07hh6kv0bnl3mqf6slj83r1f44hvk9f5qk247ajfdmynbyinabrbfi0j8za4v776i3572a"; }; dependencies = [ sources."balanced-match-1.0.0" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."browser-stdout-1.3.0" sources."commander-2.11.0" sources."concat-map-0.0.1" @@ -34837,10 +35345,10 @@ in sha1 = "0161a13e2b3378759e36b9e05be34b46a06decd5"; }; dependencies = [ - sources."argparse-1.0.9" + sources."argparse-1.0.10" sources."asynckit-0.4.0" - sources."combined-stream-1.0.5" - sources."commander-2.13.0" + sources."combined-stream-1.0.6" + sources."commander-2.14.1" sources."component-emitter-1.2.1" sources."cookiejar-2.1.1" sources."core-util-is-1.0.2" @@ -34848,25 +35356,25 @@ in sources."delayed-stream-1.0.0" sources."esprima-4.0.0" sources."extend-3.0.1" - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."formidable-1.1.1" sources."graphlib-2.1.5" sources."inherits-2.0.3" sources."isarray-1.0.0" sources."js-yaml-3.10.0" sources."json-refs-2.1.7" - sources."lodash-4.17.4" + sources."lodash-4.17.5" sources."methods-1.1.2" sources."mime-1.6.0" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."ms-2.0.0" sources."native-promise-only-0.8.1" sources."path-loader-1.0.4" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."punycode-2.1.0" sources."qs-6.5.1" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."safe-buffer-5.1.1" sources."slash-1.0.0" sources."sprintf-js-1.0.3" @@ -34907,10 +35415,10 @@ in node2nix = nodeEnv.buildNodePackage { name = "node2nix"; packageName = "node2nix"; - version = "1.5.1"; + version = "1.5.2"; src = fetchurl { - url = "https://registry.npmjs.org/node2nix/-/node2nix-1.5.1.tgz"; - sha512 = "1iy5npqmbdgxjalbw73ybgd2pfhizi8jdg91w9dpcmj9hfz02wbl306bwia397njlz5ymcblbc700zp8qb2lvrpw7jnyfvmflpvvglp"; + url = "https://registry.npmjs.org/node2nix/-/node2nix-1.5.2.tgz"; + sha512 = "2mvfkqyzfcjfp429vmagcshlp9iqblngn9fslcxpg2n83k6ajwlh0gcnyiypsixpws8nq14d3b3syr9implhsq98wg3zw7nj6b6sg9f"; }; dependencies = [ sources."abbrev-1.1.1" @@ -34923,7 +35431,7 @@ in sources."asynckit-0.4.0" sources."aws-sign2-0.7.0" sources."aws4-1.6.0" - sources."base64-js-1.2.1" + sources."base64-js-1.2.3" sources."bcrypt-pbkdf-1.0.1" sources."boom-4.3.1" sources."builtin-modules-1.1.1" @@ -34931,7 +35439,7 @@ in sources."caseless-0.12.0" sources."co-4.6.0" sources."code-point-at-1.1.0" - sources."combined-stream-1.0.5" + sources."combined-stream-1.0.6" sources."concat-stream-1.6.0" sources."config-chain-1.1.11" sources."console-control-strings-1.1.0" @@ -34947,12 +35455,12 @@ in sources."ecc-jsbn-0.1.1" sources."extend-3.0.1" sources."extsprintf-1.3.0" - sources."fast-deep-equal-1.0.0" + sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."findit-2.0.0" sources."foreachasync-3.0.0" sources."forever-agent-0.6.1" - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."fs-extra-0.6.4" (sources."fs.extra-1.3.2" // { dependencies = [ @@ -34966,7 +35474,7 @@ in sources."har-validator-5.0.3" sources."has-unicode-2.0.1" sources."hawk-6.0.2" - sources."hoek-4.2.0" + sources."hoek-4.2.1" sources."hosted-git-info-2.5.0" sources."http-signature-1.2.0" sources."inherits-2.0.3" @@ -34982,8 +35490,8 @@ in sources."json-stringify-safe-5.0.1" sources."jsonfile-1.0.1" sources."jsprim-1.4.1" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimist-0.0.8" sources."minipass-2.2.1" sources."minizlib-1.1.0" @@ -34993,7 +35501,7 @@ in sources."nopt-3.0.6" sources."normalize-package-data-2.4.0" sources."npm-package-arg-5.1.2" - sources."npm-registry-client-8.4.0" + sources."npm-registry-client-8.5.0" (sources."npmconf-2.1.2" // { dependencies = [ sources."once-1.3.3" @@ -35008,26 +35516,27 @@ in sources."optparse-1.0.5" sources."os-homedir-1.0.2" sources."os-tmpdir-1.0.2" - sources."osenv-0.1.4" + sources."osenv-0.1.5" sources."performance-now-2.1.0" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."proto-list-1.2.4" sources."punycode-1.4.1" sources."qs-6.5.1" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."request-2.83.0" sources."retry-0.10.1" sources."rimraf-2.2.8" sources."safe-buffer-5.1.1" - sources."semver-5.4.1" + sources."semver-5.5.0" sources."set-blocking-2.0.0" sources."signal-exit-3.0.2" sources."slasp-0.0.4" sources."slide-1.1.6" sources."sntp-2.1.0" - sources."spdx-correct-1.0.2" - sources."spdx-expression-parse-1.0.4" - sources."spdx-license-ids-1.2.2" + sources."spdx-correct-3.0.0" + sources."spdx-exceptions-2.1.0" + sources."spdx-expression-parse-3.0.0" + sources."spdx-license-ids-3.0.0" sources."sshpk-1.13.1" sources."ssri-4.1.6" sources."string-width-1.0.2" @@ -35036,14 +35545,14 @@ in sources."strip-ansi-3.0.1" sources."tar-3.1.15" sources."temp-0.8.3" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" sources."typedarray-0.0.6" sources."uid-number-0.0.5" sources."util-deprecate-1.0.2" sources."uuid-3.2.1" - sources."validate-npm-package-license-3.0.1" + sources."validate-npm-package-license-3.0.3" sources."validate-npm-package-name-3.0.0" sources."verror-1.10.0" sources."walk-2.3.9" @@ -35083,11 +35592,11 @@ in sources."bcrypt-pbkdf-1.0.1" sources."block-stream-0.0.9" sources."boom-4.3.1" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."caseless-0.12.0" sources."co-4.6.0" sources."code-point-at-1.1.0" - sources."combined-stream-1.0.5" + sources."combined-stream-1.0.6" sources."concat-map-0.0.1" sources."console-control-strings-1.1.0" sources."core-util-is-1.0.2" @@ -35102,10 +35611,10 @@ in sources."ecc-jsbn-0.1.1" sources."extend-3.0.1" sources."extsprintf-1.3.0" - sources."fast-deep-equal-1.0.0" + sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."forever-agent-0.6.1" - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."fs.realpath-1.0.0" sources."fstream-1.0.11" sources."gauge-2.7.4" @@ -35116,7 +35625,7 @@ in sources."har-validator-5.0.3" sources."has-unicode-2.0.1" sources."hawk-6.0.2" - sources."hoek-4.2.0" + sources."hoek-4.2.1" sources."http-signature-1.2.0" sources."inflight-1.0.6" sources."inherits-2.0.3" @@ -35130,8 +35639,8 @@ in sources."json-schema-traverse-0.3.1" sources."json-stringify-safe-5.0.1" sources."jsprim-1.4.1" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mkdirp-0.5.1" @@ -35143,13 +35652,13 @@ in sources."once-1.4.0" sources."os-homedir-1.0.2" sources."os-tmpdir-1.0.2" - sources."osenv-0.1.4" + sources."osenv-0.1.5" sources."path-is-absolute-1.0.1" sources."performance-now-2.1.0" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."punycode-1.4.1" sources."qs-6.5.1" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."request-2.83.0" sources."rimraf-2.6.2" sources."safe-buffer-5.1.1" @@ -35163,7 +35672,7 @@ in sources."stringstream-0.0.5" sources."strip-ansi-3.0.1" sources."tar-2.2.1" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" sources."util-deprecate-1.0.2" @@ -35202,10 +35711,10 @@ in node-inspector = nodeEnv.buildNodePackage { name = "node-inspector"; packageName = "node-inspector"; - version = "1.1.1"; + version = "1.1.2"; src = fetchurl { - url = "https://registry.npmjs.org/node-inspector/-/node-inspector-1.1.1.tgz"; - sha1 = "e7851eb973f380543c058db564a9812055eac640"; + url = "https://registry.npmjs.org/node-inspector/-/node-inspector-1.1.2.tgz"; + sha1 = "690c9ef7e5813da50b7a2746f334e3ff319bccd7"; }; dependencies = [ sources."abbrev-1.1.1" @@ -35240,7 +35749,7 @@ in }) sources."boom-2.10.1" sources."bplist-parser-0.1.1" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" (sources."browser-launcher2-0.4.6" // { dependencies = [ sources."minimist-0.0.8" @@ -35254,7 +35763,7 @@ in sources."cliui-3.2.0" sources."co-4.6.0" sources."code-point-at-1.1.0" - sources."combined-stream-1.0.5" + sources."combined-stream-1.0.6" sources."concat-map-0.0.1" sources."console-control-strings-1.1.0" sources."content-disposition-0.5.2" @@ -35316,7 +35825,7 @@ in sources."inherits-2.0.3" sources."ini-1.3.5" sources."invert-kv-1.0.0" - sources."ipaddr.js-1.5.2" + sources."ipaddr.js-1.6.0" sources."is-arrayish-0.2.1" sources."is-builtin-module-1.0.0" sources."is-finite-1.0.2" @@ -35346,13 +35855,13 @@ in sources."merge-descriptors-1.0.1" sources."methods-1.1.2" sources."mime-1.4.1" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimatch-3.0.4" sources."minimist-1.2.0" sources."mkdirp-0.5.1" sources."ms-2.0.0" - sources."nan-2.8.0" + sources."nan-2.9.2" sources."negotiator-0.6.1" sources."node-pre-gyp-0.6.39" sources."nopt-4.0.1" @@ -35367,7 +35876,7 @@ in sources."os-homedir-1.0.2" sources."os-locale-1.4.0" sources."os-tmpdir-1.0.2" - sources."osenv-0.1.4" + sources."osenv-0.1.5" sources."parse-json-2.2.0" sources."parseurl-1.3.2" sources."path-exists-2.1.0" @@ -35383,16 +35892,16 @@ in sources."lodash-3.10.1" ]; }) - sources."process-nextick-args-1.0.7" - sources."proxy-addr-2.0.2" + sources."process-nextick-args-2.0.0" + sources."proxy-addr-2.0.3" sources."punycode-1.4.1" sources."qs-6.5.1" sources."range-parser-1.2.0" sources."raw-body-2.3.2" - sources."rc-1.2.4" + sources."rc-1.2.5" sources."read-pkg-1.1.0" sources."read-pkg-up-1.0.1" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."redent-1.0.0" sources."repeating-2.0.1" sources."request-2.81.0" @@ -35406,9 +35915,10 @@ in sources."setprototypeof-1.1.0" sources."signal-exit-3.0.2" sources."sntp-1.0.9" - sources."spdx-correct-1.0.2" - sources."spdx-expression-parse-1.0.4" - sources."spdx-license-ids-1.2.2" + sources."spdx-correct-3.0.0" + sources."spdx-exceptions-2.1.0" + sources."spdx-expression-parse-3.0.0" + sources."spdx-license-ids-3.0.0" (sources."sshpk-1.13.1" // { dependencies = [ sources."assert-plus-1.0.0" @@ -35422,15 +35932,15 @@ in sources."strip-bom-2.0.0" sources."strip-indent-1.0.1" sources."strip-json-comments-2.0.1" - sources."strong-data-uri-1.0.4" + sources."strong-data-uri-1.0.5" sources."tar-2.2.1" sources."tar-pack-3.4.1" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."trim-newlines-1.0.0" - sources."truncate-1.0.5" + sources."truncate-2.0.1" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" - sources."type-is-1.6.15" + sources."type-is-1.6.16" sources."uid-0.0.2" sources."uid-number-0.0.6" sources."ultron-1.0.2" @@ -35448,7 +35958,7 @@ in ]; }) sources."v8-profiler-5.7.0" - sources."validate-npm-package-license-3.0.1" + sources."validate-npm-package-license-3.0.3" sources."vary-1.1.2" sources."verror-1.10.0" sources."which-1.3.0" @@ -35496,11 +36006,11 @@ in sources."bcrypt-pbkdf-1.0.1" sources."block-stream-0.0.9" sources."boom-2.10.1" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."caseless-0.12.0" sources."co-4.6.0" sources."code-point-at-1.1.0" - sources."combined-stream-1.0.5" + sources."combined-stream-1.0.6" sources."concat-map-0.0.1" sources."console-control-strings-1.1.0" sources."core-util-is-1.0.2" @@ -35546,8 +36056,8 @@ in sources."assert-plus-1.0.0" ]; }) - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mkdirp-0.5.1" @@ -35560,18 +36070,18 @@ in sources."once-1.4.0" sources."os-homedir-1.0.2" sources."os-tmpdir-1.0.2" - sources."osenv-0.1.4" + sources."osenv-0.1.5" sources."path-is-absolute-1.0.1" sources."performance-now-0.2.0" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."punycode-1.4.1" sources."qs-6.4.0" - (sources."rc-1.2.4" // { + (sources."rc-1.2.5" // { dependencies = [ sources."minimist-1.2.0" ]; }) - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."request-2.81.0" sources."rimraf-2.6.2" sources."safe-buffer-5.1.1" @@ -35591,7 +36101,7 @@ in sources."strip-json-comments-2.0.1" sources."tar-2.2.1" sources."tar-pack-3.4.1" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" sources."uid-number-0.0.6" @@ -35613,10 +36123,10 @@ in nodemon = nodeEnv.buildNodePackage { name = "nodemon"; packageName = "nodemon"; - version = "1.14.11"; + version = "1.17.1"; src = fetchurl { - url = "https://registry.npmjs.org/nodemon/-/nodemon-1.14.11.tgz"; - sha512 = "11wlzxf5xjrdybvf0lr1acr7bqhdy7s66m1w5cm02g8pzbd567xziphv1pjx6i27s34qh18rjhp6prc1rapp68x1lr8gkaxi8zfwvfz"; + url = "https://registry.npmjs.org/nodemon/-/nodemon-1.17.1.tgz"; + sha512 = "2dnscknr22xf5r06zcrjz0ljaa2agbrnczh4faf42qsmqfpcng6znv6138nwyyr16fpqk28wgfab1bw3snrsyfz8pirmjl9ywdqibx7"; }; dependencies = [ sources."abbrev-1.1.1" @@ -35628,6 +36138,7 @@ in sources."is-accessor-descriptor-1.0.0" sources."is-data-descriptor-1.0.0" sources."is-descriptor-1.0.2" + sources."is-extendable-1.0.1" ]; }) sources."arr-diff-4.0.0" @@ -35650,15 +36161,23 @@ in }) sources."binary-extensions-1.11.0" sources."boxen-1.3.0" - sources."brace-expansion-1.1.8" - sources."braces-2.3.0" + sources."brace-expansion-1.1.11" + (sources."braces-2.3.1" // { + dependencies = [ + sources."is-accessor-descriptor-1.0.0" + sources."is-data-descriptor-1.0.0" + sources."is-descriptor-1.0.2" + ]; + }) sources."cache-base-1.0.1" sources."camelcase-4.1.0" sources."capture-stack-trace-1.0.0" - sources."chalk-2.3.0" - (sources."chokidar-2.0.0" // { + sources."chalk-2.3.1" + (sources."chokidar-2.0.2" // { dependencies = [ sources."debug-2.6.9" + sources."define-property-1.0.0" + sources."extend-shallow-2.0.1" sources."has-values-0.1.4" (sources."is-accessor-descriptor-0.1.6" // { dependencies = [ @@ -35671,8 +36190,12 @@ in ]; }) sources."is-descriptor-0.1.6" - sources."is-extendable-1.0.1" - sources."kind-of-3.2.2" + sources."is-extendable-0.1.1" + (sources."is-number-3.0.0" // { + dependencies = [ + sources."kind-of-3.2.2" + ]; + }) ]; }) (sources."class-utils-0.3.6" // { @@ -35695,7 +36218,7 @@ in sources."debug-3.1.0" sources."decode-uri-component-0.2.0" sources."deep-extend-0.4.2" - sources."define-property-1.0.0" + sources."define-property-2.0.2" sources."dot-prop-4.2.0" sources."duplexer-0.1.1" sources."duplexer3-0.1.4" @@ -35707,9 +36230,11 @@ in sources."define-property-0.2.5" ]; }) - sources."extend-shallow-2.0.1" + sources."extend-shallow-3.0.2" (sources."extglob-2.0.4" // { dependencies = [ + sources."define-property-1.0.0" + sources."extend-shallow-2.0.1" sources."kind-of-5.1.0" ]; }) @@ -35728,7 +36253,7 @@ in sources."global-dirs-0.1.1" sources."got-6.7.1" sources."graceful-fs-4.1.11" - sources."has-flag-2.0.0" + sources."has-flag-3.0.0" sources."has-value-1.0.0" sources."has-values-1.0.0" sources."ignore-by-default-1.0.1" @@ -35741,24 +36266,21 @@ in sources."is-buffer-1.1.6" sources."is-data-descriptor-1.0.0" sources."is-descriptor-1.0.2" - sources."is-extendable-0.1.1" + sources."is-extendable-1.0.1" sources."is-extglob-2.1.1" sources."is-fullwidth-code-point-2.0.0" sources."is-glob-4.0.0" sources."is-installed-globally-0.1.0" sources."is-npm-1.0.0" - sources."is-number-3.0.0" + sources."is-number-4.0.0" sources."is-obj-1.0.1" - (sources."is-odd-1.0.0" // { - dependencies = [ - sources."kind-of-3.2.2" - ]; - }) + sources."is-odd-2.0.0" sources."is-path-inside-1.0.1" sources."is-plain-object-2.0.4" sources."is-redirect-1.0.0" sources."is-retry-allowed-1.1.0" sources."is-stream-1.1.0" + sources."is-windows-1.0.2" sources."isarray-1.0.0" sources."isexe-2.0.0" sources."isobject-3.0.1" @@ -35767,11 +36289,11 @@ in sources."lazy-cache-2.0.2" sources."lowercase-keys-1.0.0" sources."lru-cache-4.1.1" - sources."make-dir-1.1.0" + sources."make-dir-1.2.0" sources."map-cache-0.2.2" sources."map-stream-0.1.0" sources."map-visit-1.0.0" - (sources."micromatch-3.1.5" // { + (sources."micromatch-3.1.9" // { dependencies = [ (sources."is-accessor-descriptor-0.1.6" // { dependencies = [ @@ -35784,18 +36306,15 @@ in ]; }) sources."is-descriptor-0.1.6" + sources."is-extendable-0.1.1" ]; }) sources."minimatch-3.0.4" sources."minimist-1.2.0" - sources."mixin-deep-1.3.0" + sources."mixin-deep-1.3.1" sources."ms-2.0.0" - sources."nan-2.8.0" - (sources."nanomatch-1.2.7" // { - dependencies = [ - sources."kind-of-5.1.0" - ]; - }) + sources."nan-2.9.2" + sources."nanomatch-1.2.9" sources."nopt-1.0.10" sources."normalize-path-2.1.1" sources."npm-run-path-2.0.2" @@ -35813,21 +36332,23 @@ in sources."pify-3.0.0" sources."posix-character-classes-0.1.1" sources."prepend-http-1.0.4" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."ps-tree-1.1.0" sources."pseudomap-1.0.2" sources."pstree.remy-1.1.0" - sources."rc-1.2.4" - sources."readable-stream-2.3.3" + sources."rc-1.2.5" + sources."readable-stream-2.3.4" sources."readdirp-2.1.0" - sources."regex-not-1.0.0" - sources."registry-auth-token-3.3.1" + sources."regex-not-1.0.2" + sources."registry-auth-token-3.3.2" sources."registry-url-3.1.0" sources."remove-trailing-separator-1.1.0" sources."repeat-element-1.1.2" sources."repeat-string-1.6.1" sources."resolve-url-0.2.1" + sources."ret-0.1.15" sources."safe-buffer-5.1.1" + sources."safe-regex-1.1.0" sources."semver-5.5.0" sources."semver-diff-2.1.0" sources."set-getter-0.1.0" @@ -35843,10 +36364,15 @@ in sources."kind-of-5.1.0" ]; }) + sources."extend-shallow-2.0.1" sources."kind-of-4.0.0" ]; }) - sources."snapdragon-node-2.1.1" + (sources."snapdragon-node-2.1.1" // { + dependencies = [ + sources."kind-of-3.2.2" + ]; + }) sources."snapdragon-util-3.0.1" sources."source-map-0.5.7" sources."source-map-resolve-0.5.1" @@ -35865,19 +36391,15 @@ in sources."strip-ansi-4.0.0" sources."strip-eof-1.0.0" sources."strip-json-comments-2.0.1" - sources."supports-color-4.5.0" + sources."supports-color-5.2.0" sources."term-size-1.2.0" sources."through-2.3.8" sources."timed-out-4.0.1" sources."to-object-path-0.3.0" - (sources."to-regex-3.0.1" // { - dependencies = [ - sources."define-property-0.2.5" - ]; - }) + sources."to-regex-3.0.2" sources."to-regex-range-2.1.1" sources."touch-3.1.0" - (sources."undefsafe-2.0.1" // { + (sources."undefsafe-2.0.2" // { dependencies = [ sources."debug-2.6.9" ]; @@ -35898,6 +36420,7 @@ in ]; }) sources."unzip-response-2.0.1" + sources."upath-1.0.4" sources."update-notifier-2.3.0" sources."urix-0.1.0" sources."url-parse-lax-1.0.0" @@ -35921,22 +36444,22 @@ in node-red = nodeEnv.buildNodePackage { name = "node-red"; packageName = "node-red"; - version = "0.17.5"; + version = "0.18.4"; src = fetchurl { - url = "https://registry.npmjs.org/node-red/-/node-red-0.17.5.tgz"; - sha1 = "1dcf3ead7902ce2df615cdfbe19f3cd9a50e28e2"; + url = "https://registry.npmjs.org/node-red/-/node-red-0.18.4.tgz"; + sha512 = "0d25q2hxpf5snrg8f3gplrjd73hqzyzxna0g2q6l0bm04fm8xgby8ydixaf8mgyz9dly2k5mw79jvs653m6vk9cl0r61fv8qr75khjz"; }; dependencies = [ sources."abbrev-1.1.1" sources."accepts-1.3.4" - sources."addressparser-0.1.3" + sources."addressparser-0.3.2" sources."ajv-5.5.2" sources."ansi-regex-2.1.1" sources."ansi-styles-2.2.1" sources."append-field-0.1.0" sources."aproba-1.2.0" sources."are-we-there-yet-1.1.4" - sources."argparse-1.0.9" + sources."argparse-1.0.10" sources."array-flatten-1.1.1" sources."array-indexofobject-0.0.1" sources."asn1-0.2.3" @@ -35947,7 +36470,7 @@ in sources."aws-sign2-0.6.0" sources."aws4-1.6.0" sources."balanced-match-1.0.0" - sources."basic-auth-1.1.0" + sources."basic-auth-2.0.0" (sources."bcrypt-1.0.3" // { dependencies = [ sources."assert-plus-1.0.0" @@ -35959,13 +36482,11 @@ in sources."boom-5.2.0" ]; }) - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."har-validator-5.0.3" sources."hawk-6.0.2" - sources."hoek-4.2.0" + sources."hoek-4.2.1" sources."http-signature-1.2.0" - sources."nopt-4.0.1" - sources."qs-6.5.1" sources."request-2.83.0" sources."sntp-2.1.0" sources."tunnel-agent-0.6.0" @@ -35975,13 +36496,13 @@ in sources."bcryptjs-2.4.3" sources."bl-1.2.1" sources."block-stream-0.0.9" - sources."body-parser-1.17.2" + sources."body-parser-1.18.2" sources."boolbase-1.0.0" sources."boom-2.10.1" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."buildmail-2.0.0" sources."busboy-0.2.14" - sources."bytes-2.4.0" + sources."bytes-3.0.0" sources."callback-stream-1.1.0" sources."caseless-0.11.0" sources."chalk-1.1.3" @@ -35993,8 +36514,8 @@ in sources."clone-2.1.1" sources."co-4.6.0" sources."code-point-at-1.1.0" - sources."combined-stream-1.0.5" - sources."commander-2.9.0" + sources."combined-stream-1.0.6" + sources."commander-2.14.1" sources."commist-1.0.0" sources."concat-map-0.0.1" sources."concat-stream-1.6.0" @@ -36006,14 +36527,14 @@ in sources."cookie-signature-1.0.6" sources."cookies-0.7.1" sources."core-util-is-1.0.2" - sources."cors-2.8.3" + sources."cors-2.8.4" sources."crc-3.4.4" - sources."cron-1.2.1" + sources."cron-1.3.0" sources."cryptiles-2.0.5" sources."css-select-1.2.0" sources."css-what-2.1.0" sources."dashdash-1.14.1" - sources."debug-2.6.7" + sources."debug-2.6.9" sources."deep-extend-0.4.2" sources."delayed-stream-1.0.0" sources."delegates-1.0.0" @@ -36033,35 +36554,31 @@ in sources."entities-1.1.1" sources."escape-html-1.0.3" sources."escape-string-regexp-1.0.5" - sources."esprima-3.1.3" + sources."esprima-4.0.0" sources."etag-1.8.1" - (sources."express-4.15.3" // { + (sources."express-4.16.2" // { dependencies = [ + sources."setprototypeof-1.1.0" sources."statuses-1.3.1" ]; }) - (sources."express-session-1.15.2" // { - dependencies = [ - sources."debug-2.6.3" - sources."ms-0.7.2" - ]; - }) + sources."express-session-1.15.6" sources."extend-3.0.1" sources."extsprintf-1.3.0" - sources."fast-deep-equal-1.0.0" + sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."feedparser-1.1.3" - (sources."finalhandler-1.0.6" // { + sources."finalhandler-1.1.0" + (sources."follow-redirects-1.3.0" // { dependencies = [ - sources."debug-2.6.9" + sources."debug-3.1.0" ]; }) - sources."follow-redirects-1.2.4" sources."forever-agent-0.6.1" sources."form-data-1.0.1" sources."forwarded-0.1.2" - sources."fresh-0.5.0" - sources."fs-extra-1.0.0" + sources."fresh-0.5.2" + sources."fs-extra-5.0.0" sources."fs.notify-0.0.4" sources."fs.realpath-1.0.0" sources."fstream-1.0.11" @@ -36074,18 +36591,13 @@ in sources."glob-parent-3.1.0" sources."glob-stream-6.1.0" sources."graceful-fs-4.1.11" - sources."graceful-readlink-1.0.1" sources."har-schema-2.0.0" sources."har-validator-2.0.6" sources."has-ansi-2.0.0" sources."has-unicode-2.0.1" sources."hash-sum-1.0.2" sources."hawk-3.1.3" - (sources."help-me-1.1.0" // { - dependencies = [ - sources."pump-2.0.1" - ]; - }) + sources."help-me-1.1.0" sources."hoek-2.16.3" (sources."htmlparser2-3.9.2" // { dependencies = [ @@ -36100,35 +36612,36 @@ in sources."http-signature-1.1.1" sources."i18next-1.10.6" sources."i18next-client-1.10.3" - sources."iconv-lite-0.4.15" + sources."iconv-lite-0.4.19" sources."imap-0.8.19" sources."inflight-1.0.6" sources."inherits-2.0.3" sources."ini-1.3.5" - sources."ipaddr.js-1.4.0" + sources."ipaddr.js-1.6.0" sources."is-absolute-1.0.0" sources."is-extglob-2.1.1" sources."is-fullwidth-code-point-1.0.0" sources."is-glob-3.1.0" - sources."is-my-json-valid-2.17.1" + sources."is-my-ip-valid-1.0.0" + sources."is-my-json-valid-2.17.2" sources."is-negated-glob-1.0.0" sources."is-property-1.0.2" sources."is-relative-1.0.0" sources."is-typedarray-1.0.0" sources."is-unc-path-1.0.0" sources."is-utf8-0.2.1" - sources."is-windows-1.0.1" + sources."is-windows-1.0.2" sources."isarray-1.0.0" sources."isstream-0.1.2" - sources."js-yaml-3.8.4" + sources."js-yaml-3.10.0" sources."jsbn-0.1.1" sources."json-schema-0.2.3" sources."json-schema-traverse-0.3.1" sources."json-stable-stringify-1.0.1" sources."json-stringify-safe-5.0.1" sources."json5-0.2.0" - sources."jsonata-1.2.6" - sources."jsonfile-2.4.0" + sources."jsonata-1.5.0" + sources."jsonfile-4.0.0" sources."jsonify-0.0.0" sources."jsonpointer-4.0.1" (sources."jsprim-1.4.1" // { @@ -36137,12 +36650,11 @@ in ]; }) sources."keygrip-1.0.2" - sources."klaw-1.3.1" sources."leven-1.0.2" sources."libbase64-0.1.0" sources."libmime-1.2.0" sources."libqp-1.1.0" - sources."lodash-4.17.4" + sources."lodash-4.17.5" sources."lodash.assignin-4.2.0" sources."lodash.bind-4.2.1" sources."lodash.defaults-4.2.0" @@ -36150,39 +36662,41 @@ in sources."lodash.flatten-4.4.0" sources."lodash.foreach-4.5.0" sources."lodash.map-4.6.0" - sources."lodash.merge-4.6.0" + sources."lodash.merge-4.6.1" sources."lodash.pick-4.4.0" sources."lodash.reduce-4.6.0" sources."lodash.reject-4.6.0" sources."lodash.some-4.6.0" + sources."lru-cache-4.1.1" (sources."mailcomposer-2.1.0" // { dependencies = [ sources."needle-0.10.0" ]; }) - (sources."mailparser-0.6.2" // { + sources."mailparser-0.6.2" + sources."media-typer-0.3.0" + (sources."memorystore-1.6.0" // { dependencies = [ - sources."addressparser-1.0.1" + sources."debug-3.1.0" ]; }) - sources."media-typer-0.3.0" sources."merge-descriptors-1.0.1" sources."methods-1.1.2" - sources."mime-1.3.4" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-1.4.1" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."mimelib-0.3.1" sources."minimatch-3.0.4" sources."minimist-1.2.0" sources."mkdirp-0.5.1" sources."moment-2.20.1" sources."moment-timezone-0.5.14" - (sources."mqtt-2.9.0" // { + (sources."mqtt-2.15.1" // { dependencies = [ sources."ws-3.3.3" ]; }) - sources."mqtt-packet-5.4.0" + sources."mqtt-packet-5.5.0" sources."ms-2.0.0" (sources."multer-1.3.0" // { dependencies = [ @@ -36200,26 +36714,28 @@ in sources."node-pre-gyp-0.6.36" (sources."node-red-node-email-0.1.24" // { dependencies = [ - sources."addressparser-0.3.2" + sources."addressparser-1.0.1" sources."clone-1.0.3" sources."isarray-0.0.1" sources."minimist-0.0.10" sources."readable-stream-1.1.14" + sources."semver-5.3.0" sources."string_decoder-0.10.31" ]; }) (sources."node-red-node-feedparser-0.1.8" // { dependencies = [ + sources."addressparser-0.1.3" sources."async-2.6.0" sources."bl-1.1.2" sources."isarray-0.0.1" + sources."process-nextick-args-1.0.7" sources."qs-6.2.3" sources."readable-stream-1.0.34" - sources."sax-0.6.1" sources."string_decoder-0.10.31" ]; }) - sources."node-red-node-rbe-0.1.14" + sources."node-red-node-rbe-0.2.1" (sources."node-red-node-twitter-0.1.12" // { dependencies = [ sources."assert-plus-1.0.0" @@ -36231,12 +36747,11 @@ in sources."boom-5.2.0" ]; }) - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."har-validator-5.0.3" sources."hawk-6.0.2" - sources."hoek-4.2.0" + sources."hoek-4.2.1" sources."http-signature-1.2.0" - sources."qs-6.5.1" sources."request-2.83.0" sources."sntp-2.1.0" sources."tunnel-agent-0.6.0" @@ -36247,13 +36762,13 @@ in sources."nodemailer-direct-transport-1.1.0" sources."nodemailer-smtp-transport-1.1.0" sources."nodemailer-wellknown-0.1.10" - sources."nopt-3.0.6" + sources."nopt-4.0.1" sources."npmlog-4.1.2" sources."nth-check-1.0.1" sources."number-is-nan-1.0.1" sources."oauth-0.9.14" sources."oauth-sign-0.8.2" - sources."oauth2orize-1.8.0" + sources."oauth2orize-1.11.0" sources."object-assign-4.1.1" sources."on-finished-2.3.0" sources."on-headers-1.0.1" @@ -36263,9 +36778,9 @@ in sources."ordered-read-streams-1.0.1" sources."os-homedir-1.0.2" sources."os-tmpdir-1.0.2" - sources."osenv-0.1.4" + sources."osenv-0.1.5" sources."parseurl-1.3.2" - sources."passport-0.3.2" + sources."passport-0.4.0" sources."passport-http-bearer-1.0.1" sources."passport-oauth2-client-password-0.1.2" sources."passport-strategy-1.0.0" @@ -36277,17 +36792,18 @@ in sources."pinkie-2.0.4" sources."pinkie-promise-2.0.1" sources."poplib-0.1.7" - sources."process-nextick-args-1.0.7" - sources."proxy-addr-1.1.5" - sources."pump-1.0.3" + sources."process-nextick-args-2.0.0" + sources."proxy-addr-2.0.3" + sources."pseudomap-1.0.2" + sources."pump-2.0.1" sources."pumpify-1.4.0" sources."punycode-1.4.1" - sources."qs-6.4.0" + sources."qs-6.5.1" sources."random-bytes-1.0.0" sources."range-parser-1.2.0" - sources."raw-body-2.2.0" - sources."rc-1.2.4" - sources."readable-stream-2.3.3" + sources."raw-body-2.3.2" + sources."rc-1.2.5" + sources."readable-stream-2.3.4" sources."reinterval-1.1.0" sources."remove-trailing-separator-1.1.0" (sources."request-2.74.0" // { @@ -36299,17 +36815,17 @@ in sources."retry-0.6.1" sources."rimraf-2.6.2" sources."safe-buffer-5.1.1" - sources."sax-1.2.4" - sources."semver-5.3.0" - sources."send-0.15.3" + sources."sax-0.6.1" + sources."semver-5.4.1" + sources."send-0.16.1" sources."sentiment-2.1.0" - sources."serve-static-1.12.3" + sources."serve-static-1.13.1" sources."set-blocking-2.0.0" sources."setprototypeof-1.0.3" sources."signal-exit-3.0.2" sources."smtp-connection-1.3.8" sources."sntp-1.0.9" - sources."source-map-0.5.7" + sources."source-map-0.6.1" sources."split2-2.2.0" sources."sprintf-js-1.0.3" (sources."sshpk-1.13.1" // { @@ -36331,23 +36847,28 @@ in sources."through2-2.0.3" sources."through2-filter-2.0.0" sources."to-absolute-glob-2.0.2" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."tunnel-agent-0.4.3" sources."tweetnacl-0.14.5" sources."twitter-ng-0.6.2" - sources."type-is-1.6.15" + sources."type-is-1.6.16" sources."typedarray-0.0.6" - sources."uglify-js-3.0.20" + (sources."uglify-js-3.3.6" // { + dependencies = [ + sources."commander-2.13.0" + ]; + }) sources."uid-number-0.0.6" sources."uid-safe-2.1.5" sources."uid2-0.0.3" sources."ultron-1.1.1" sources."unc-path-regex-0.1.2" sources."unique-stream-2.2.1" + sources."universalify-0.1.1" sources."unpipe-1.0.0" sources."utf7-1.0.2" sources."util-deprecate-1.0.2" - sources."utils-merge-1.0.0" + sources."utils-merge-1.0.1" sources."uue-3.1.1" sources."uuid-3.2.1" sources."vary-1.1.2" @@ -36357,14 +36878,15 @@ in sources."wide-align-1.1.2" sources."wordwrap-0.0.3" sources."wrappy-1.0.2" - (sources."ws-1.1.1" // { + (sources."ws-1.1.5" // { dependencies = [ sources."ultron-1.0.2" ]; }) - sources."xml2js-0.4.17" - sources."xmlbuilder-4.2.1" + sources."xml2js-0.4.19" + sources."xmlbuilder-9.0.7" sources."xtend-4.0.1" + sources."yallist-2.1.2" ]; buildInputs = globalBuildInputs; meta = { @@ -36548,13 +37070,13 @@ in ]; }) sources."boom-4.3.1" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."caseless-0.12.0" sources."chownr-0.0.2" sources."co-4.6.0" sources."code-point-at-1.1.0" sources."coffee-script-1.12.7" - sources."combined-stream-1.0.5" + sources."combined-stream-1.0.6" sources."concat-map-0.0.1" (sources."config-chain-1.1.11" // { dependencies = [ @@ -36575,12 +37097,12 @@ in sources."ecc-jsbn-0.1.1" sources."extend-3.0.1" sources."extsprintf-1.3.0" - sources."fast-deep-equal-1.0.0" + sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."findit-1.2.0" sources."foreachasync-3.0.0" sources."forever-agent-0.6.1" - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."fs-extra-0.6.4" (sources."fs.extra-1.3.2" // { dependencies = [ @@ -36601,7 +37123,7 @@ in sources."har-validator-5.0.3" sources."has-unicode-2.0.1" sources."hawk-6.0.2" - sources."hoek-4.2.0" + sources."hoek-4.2.1" sources."http-signature-1.2.0" sources."inflight-1.0.6" sources."inherits-2.0.3" @@ -36616,8 +37138,8 @@ in sources."json-stringify-safe-5.0.1" sources."jsonfile-1.0.1" sources."jsprim-1.4.1" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mkdirp-0.3.5" @@ -36644,11 +37166,11 @@ in sources."osenv-0.0.3" sources."path-is-absolute-1.0.1" sources."performance-now-2.1.0" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."proto-list-1.2.4" sources."punycode-1.4.1" sources."qs-6.5.1" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."request-2.83.0" sources."retry-0.6.0" sources."rimraf-2.6.2" @@ -36676,7 +37198,7 @@ in sources."rimraf-2.1.4" ]; }) - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" sources."underscore-1.4.4" @@ -36713,7 +37235,7 @@ in sources."ansi-styles-2.2.1" sources."ansicolors-0.3.2" sources."archy-1.0.0" - sources."argparse-1.0.9" + sources."argparse-1.0.10" sources."asap-2.0.6" sources."async-1.5.2" sources."balanced-match-1.0.0" @@ -36721,7 +37243,7 @@ in sources."bluebird-3.5.1" sources."bops-0.1.1" sources."boxen-0.3.1" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."builtin-modules-1.1.1" sources."camelcase-1.2.1" sources."capture-stack-trace-1.0.0" @@ -36739,7 +37261,7 @@ in sources."color-convert-1.9.1" sources."color-name-1.1.3" sources."colors-1.0.3" - sources."commander-2.13.0" + sources."commander-2.14.1" sources."concat-map-0.0.1" (sources."configstore-1.4.0" // { dependencies = [ @@ -36779,7 +37301,7 @@ in sources."graceful-fs-4.1.11" sources."graphlib-2.1.5" sources."has-ansi-2.0.0" - sources."has-flag-2.0.0" + sources."has-flag-3.0.0" sources."hasbin-1.2.3" sources."hosted-git-info-2.5.0" sources."iconv-lite-0.4.19" @@ -36818,24 +37340,28 @@ in sources."lazy-cache-1.0.4" sources."lcid-1.0.0" sources."load-json-file-1.1.0" - sources."lodash-4.17.4" + sources."lodash-4.17.5" sources."lodash.assign-4.2.0" sources."lodash.clonedeep-4.5.0" sources."lodash.defaults-4.2.0" sources."lodash.defaultsdeep-4.6.0" - sources."lodash.mergewith-4.6.0" + sources."lodash.mergewith-4.6.1" sources."longest-1.0.1" sources."lowercase-keys-1.0.0" sources."lru-cache-4.1.1" - sources."make-dir-1.1.0" - sources."minimatch-3.0.2" + sources."make-dir-1.2.0" + sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mixin-object-2.0.1" sources."mkdirp-0.5.1" sources."ms-2.0.0" sources."mute-stream-0.0.6" sources."nconf-0.7.2" - sources."needle-2.1.1" + (sources."needle-2.2.0" // { + dependencies = [ + sources."debug-2.6.9" + ]; + }) sources."nested-error-stacks-1.0.2" sources."node-alias-1.0.4" sources."node-status-codes-1.0.0" @@ -36857,7 +37383,7 @@ in sources."os-locale-1.4.0" sources."os-name-1.0.3" sources."os-tmpdir-1.0.2" - sources."osenv-0.1.4" + sources."osenv-0.1.5" sources."osx-release-1.1.0" sources."p-finally-1.0.0" sources."package-json-2.4.0" @@ -36871,19 +37397,20 @@ in sources."pinkie-2.0.4" sources."pinkie-promise-2.0.1" sources."prepend-http-1.0.4" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."promise-7.3.1" sources."proxy-from-env-1.0.0" sources."pseudomap-1.0.2" sources."punycode-1.3.2" sources."querystring-0.2.0" - sources."rc-1.2.4" + sources."rc-1.2.5" sources."rc-config-loader-2.0.1" sources."read-all-stream-3.1.0" sources."read-pkg-1.1.0" sources."read-pkg-up-1.0.1" - sources."readable-stream-2.3.3" - sources."registry-auth-token-3.3.1" + sources."readable-stream-2.3.4" + sources."recursive-readdir-2.2.2" + sources."registry-auth-token-3.3.2" sources."registry-url-3.1.0" sources."repeat-string-1.6.1" sources."repeating-2.0.1" @@ -36909,11 +37436,12 @@ in sources."shebang-regex-1.0.0" sources."signal-exit-3.0.2" sources."slide-1.1.6" - (sources."snyk-1.69.3" // { + (sources."snyk-1.69.10" // { dependencies = [ sources."async-0.9.2" sources."camelcase-3.0.0" sources."cliui-3.2.0" + sources."debug-3.1.0" sources."for-in-0.1.8" sources."got-3.3.1" sources."latest-version-1.0.1" @@ -36928,40 +37456,60 @@ in sources."yargs-4.8.1" ]; }) - sources."snyk-config-1.0.1" + (sources."snyk-config-1.0.1" // { + dependencies = [ + sources."debug-2.6.9" + ]; + }) sources."snyk-go-plugin-1.4.5" sources."snyk-gradle-plugin-1.2.0" - sources."snyk-module-1.8.1" + (sources."snyk-module-1.8.1" // { + dependencies = [ + sources."debug-2.6.9" + ]; + }) sources."snyk-mvn-plugin-1.1.1" (sources."snyk-nuget-plugin-1.3.9" // { dependencies = [ - sources."debug-3.1.0" sources."es6-promise-4.2.4" ]; }) - (sources."snyk-php-plugin-1.3.2" // { + sources."snyk-php-plugin-1.3.2" + (sources."snyk-policy-1.10.2" // { dependencies = [ - sources."debug-3.1.0" + sources."debug-2.6.9" + ]; + }) + sources."snyk-python-plugin-1.5.6" + (sources."snyk-resolve-1.0.0" // { + dependencies = [ + sources."debug-2.6.9" ]; }) - sources."snyk-policy-1.10.1" - sources."snyk-python-plugin-1.5.3" - sources."snyk-recursive-readdir-2.0.0" - sources."snyk-resolve-1.0.0" (sources."snyk-resolve-deps-1.7.0" // { dependencies = [ sources."configstore-2.1.0" + sources."debug-2.6.9" sources."update-notifier-0.6.3" sources."uuid-2.0.3" ]; }) - sources."snyk-sbt-plugin-1.2.2" + (sources."snyk-sbt-plugin-1.2.4" // { + dependencies = [ + sources."debug-2.6.9" + ]; + }) sources."snyk-tree-1.0.0" - sources."snyk-try-require-1.2.0" + (sources."snyk-try-require-1.2.0" // { + dependencies = [ + sources."debug-2.6.9" + ]; + }) sources."spawn-please-0.3.0" - sources."spdx-correct-1.0.2" - sources."spdx-expression-parse-1.0.4" - sources."spdx-license-ids-1.2.2" + sources."spdx-correct-3.0.0" + sources."spdx-exceptions-2.1.0" + sources."spdx-expression-parse-3.0.0" + sources."spdx-license-ids-3.0.0" sources."sprintf-js-1.0.3" sources."stream-shift-1.0.0" sources."string-length-1.0.1" @@ -36992,7 +37540,7 @@ in sources."ansi-styles-3.2.0" sources."boxen-1.3.0" sources."camelcase-4.1.0" - sources."chalk-2.3.0" + sources."chalk-2.3.1" sources."configstore-3.1.1" sources."dot-prop-4.2.0" sources."got-6.7.1" @@ -37002,7 +37550,7 @@ in sources."pify-3.0.0" sources."string-width-2.1.1" sources."strip-ansi-4.0.0" - sources."supports-color-4.5.0" + sources."supports-color-5.2.0" sources."timed-out-4.0.1" sources."unzip-response-2.0.1" sources."widest-line-2.0.0" @@ -37014,7 +37562,7 @@ in sources."url-parse-lax-1.0.0" sources."util-deprecate-1.0.2" sources."uuid-3.2.1" - sources."validate-npm-package-license-3.0.1" + sources."validate-npm-package-license-3.0.3" sources."which-1.3.0" sources."which-module-1.0.0" sources."widest-line-1.0.0" @@ -37026,7 +37574,7 @@ in sources."write-file-atomic-1.3.4" sources."xdg-basedir-2.0.0" sources."xml2js-0.4.19" - sources."xmlbuilder-9.0.4" + sources."xmlbuilder-9.0.7" sources."y18n-3.2.1" sources."yallist-2.1.2" sources."yargs-3.15.0" @@ -37045,10 +37593,10 @@ in nsp = nodeEnv.buildNodePackage { name = "nsp"; packageName = "nsp"; - version = "3.1.0"; + version = "3.2.1"; src = fetchurl { - url = "https://registry.npmjs.org/nsp/-/nsp-3.1.0.tgz"; - sha512 = "0hbwm017cl5ybzw14l44mbinhnv38jrnbpg1ngkdibhc5hiimm8hqr2pi5dzh6flvxr0x6nym93029i7j41clr6rlvn1ab6r5cgdl4f"; + url = "https://registry.npmjs.org/nsp/-/nsp-3.2.1.tgz"; + sha512 = "06qrykgjpr3m7sl9g2axaraxh3mndmffgjxf45nqw5jblqa9zsnkvgmds8s29avp4qhmk084ri0rbg30yr15bd73i2152q6na5qdfbl"; }; dependencies = [ sources."agent-base-4.2.0" @@ -37058,7 +37606,7 @@ in sources."boom-5.2.0" sources."builtin-modules-1.1.1" sources."camelcase-4.1.0" - sources."chalk-2.3.0" + sources."chalk-2.3.1" sources."chardet-0.4.2" sources."cli-cursor-2.1.0" sources."cli-table2-0.2.0" @@ -37087,8 +37635,8 @@ in sources."get-caller-file-1.0.2" sources."get-stream-3.0.0" sources."graceful-fs-4.1.11" - sources."has-flag-2.0.0" - sources."hoek-4.2.0" + sources."has-flag-3.0.0" + sources."hoek-4.2.1" sources."hosted-git-info-2.5.0" sources."https-proxy-agent-2.1.1" sources."iconv-lite-0.4.19" @@ -37096,7 +37644,7 @@ in dependencies = [ sources."ansi-regex-3.0.0" sources."is-fullwidth-code-point-2.0.0" - sources."lodash-4.17.4" + sources."lodash-4.17.5" sources."string-width-2.1.1" sources."strip-ansi-4.0.0" ]; @@ -37114,7 +37662,7 @@ in sources."lodash-3.10.1" sources."lru-cache-4.1.1" sources."mem-1.1.0" - sources."mimic-fn-1.1.0" + sources."mimic-fn-1.2.0" sources."ms-2.0.0" sources."mute-stream-0.0.7" sources."nodesecurity-npm-utils-6.0.0" @@ -37147,17 +37695,18 @@ in sources."shebang-command-1.2.0" sources."shebang-regex-1.0.0" sources."signal-exit-3.0.2" - sources."spdx-correct-1.0.2" - sources."spdx-expression-parse-1.0.4" - sources."spdx-license-ids-1.2.2" + sources."spdx-correct-3.0.0" + sources."spdx-exceptions-2.1.0" + sources."spdx-expression-parse-3.0.0" + sources."spdx-license-ids-3.0.0" sources."string-width-1.0.2" sources."strip-ansi-3.0.1" sources."strip-bom-3.0.0" sources."strip-eof-1.0.0" - sources."supports-color-4.5.0" + sources."supports-color-5.2.0" sources."through-2.3.8" sources."tmp-0.0.33" - sources."validate-npm-package-license-3.0.1" + sources."validate-npm-package-license-3.0.3" sources."which-1.3.0" sources."which-module-2.0.0" sources."wrap-ansi-2.1.0" @@ -37186,22 +37735,23 @@ in ocaml-language-server = nodeEnv.buildNodePackage { name = "ocaml-language-server"; packageName = "ocaml-language-server"; - version = "1.0.16"; + version = "1.0.27"; src = fetchurl { - url = "https://registry.npmjs.org/ocaml-language-server/-/ocaml-language-server-1.0.16.tgz"; - sha512 = "2f63gvm5x3c7dxp8fpaxhvjlha7isdfrbq7pqpkj0n33zndhi4925qkmzgrgn7qhrff6dhiqb3j1a3m1jjwq1k5kff910rrxd1622jd"; + url = "https://registry.npmjs.org/ocaml-language-server/-/ocaml-language-server-1.0.27.tgz"; + sha512 = "14fhxv57nybf56n1454ccmdn2sn41amzf4f6a1n70ha48ndrpcw14g6hvv91k5bj775pxh74aa8ncsc3f7bfgz0cg0nwg8ysv43dmqw"; }; dependencies = [ sources."async-2.6.0" sources."balanced-match-1.0.0" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."concat-map-0.0.1" + sources."deepmerge-2.0.1" sources."fs.realpath-1.0.0" sources."glob-7.1.2" sources."inflight-1.0.6" sources."inherits-2.0.3" - sources."lodash-4.17.4" - sources."lokijs-1.5.1" + sources."lodash-4.17.5" + sources."lokijs-1.5.2" sources."minimatch-3.0.4" sources."once-1.4.0" sources."path-is-absolute-1.0.1" @@ -37237,7 +37787,7 @@ in sources."align-text-0.1.4" sources."amdefine-1.0.1" sources."ansi-regex-2.1.1" - sources."argparse-1.0.9" + sources."argparse-1.0.10" sources."array-flatten-1.1.1" sources."asap-2.0.6" sources."asn1-0.2.3" @@ -37257,7 +37807,7 @@ in ]; }) sources."boom-4.3.1" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."builtin-modules-1.1.1" sources."bunyan-1.8.12" sources."bunyan-syslog-udp-0.1.0" @@ -37271,9 +37821,9 @@ in sources."co-4.6.0" sources."code-point-at-1.1.0" sources."colors-1.1.2" - sources."combined-stream-1.0.5" - sources."compressible-2.0.12" - sources."compression-1.7.1" + sources."combined-stream-1.0.6" + sources."compressible-2.0.13" + sources."compression-1.7.2" sources."concat-map-0.0.1" sources."connect-busboy-0.0.2" sources."content-disposition-0.5.2" @@ -37324,7 +37874,7 @@ in }) sources."extend-3.0.1" sources."extsprintf-1.3.0" - sources."fast-deep-equal-1.0.0" + sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" (sources."finalhandler-1.1.0" // { dependencies = [ @@ -37334,7 +37884,7 @@ in sources."find-up-1.1.2" sources."foreach-2.0.5" sources."forever-agent-0.6.1" - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."forwarded-0.1.2" sources."fresh-0.5.2" sources."function-bind-1.1.1" @@ -37350,7 +37900,7 @@ in sources."has-symbols-1.0.0" sources."hat-0.0.3" sources."hawk-6.0.2" - sources."hoek-4.2.0" + sources."hoek-4.2.1" sources."hosted-git-info-2.5.0" sources."hot-shots-4.8.0" (sources."http-errors-1.6.2" // { @@ -37363,7 +37913,7 @@ in sources."inflight-1.0.6" sources."inherits-2.0.3" sources."invert-kv-1.0.0" - sources."ipaddr.js-1.5.2" + sources."ipaddr.js-1.6.0" sources."is-arguments-1.0.2" sources."is-arrayish-0.2.1" sources."is-buffer-1.1.6" @@ -37398,8 +37948,8 @@ in sources."merge-descriptors-1.0.1" sources."methods-1.1.2" sources."mime-1.4.1" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimatch-3.0.4" sources."minimist-0.0.10" sources."mkdirp-0.5.1" @@ -37407,7 +37957,7 @@ in sources."ms-2.0.0" sources."msgpack5-3.6.0" sources."mv-2.1.1" - sources."nan-2.8.0" + sources."nan-2.9.2" sources."ncp-2.0.0" sources."negotiator-git+https://github.com/arlolra/negotiator.git#full-parse-access" sources."normalize-package-data-2.4.0" @@ -37432,9 +37982,9 @@ in sources."pinkie-2.0.4" sources."pinkie-promise-2.0.1" sources."prfun-2.1.5" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."promise-7.3.1" - sources."proxy-addr-2.0.2" + sources."proxy-addr-2.0.3" sources."punycode-1.4.1" sources."qs-6.5.1" sources."range-parser-1.2.0" @@ -37449,17 +37999,17 @@ in sources."right-align-0.1.3" sources."rimraf-2.4.5" sources."safe-buffer-5.1.1" - sources."safe-json-stringify-1.0.4" + sources."safe-json-stringify-1.1.0" sources."semver-5.5.0" sources."send-0.16.1" sources."serve-favicon-2.4.5" sources."serve-static-1.13.1" - (sources."service-runner-2.5.0" // { + (sources."service-runner-2.5.1" // { dependencies = [ sources."isarray-1.0.0" sources."minimist-0.0.8" sources."ms-0.7.3" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."string_decoder-1.0.3" ]; }) @@ -37468,9 +38018,10 @@ in sources."simplediff-0.1.1" sources."sntp-2.1.0" sources."source-map-0.4.4" - sources."spdx-correct-1.0.2" - sources."spdx-expression-parse-1.0.4" - sources."spdx-license-ids-1.2.2" + sources."spdx-correct-3.0.0" + sources."spdx-exceptions-2.1.0" + sources."spdx-expression-parse-3.0.0" + sources."spdx-license-ids-3.0.0" sources."sprintf-js-1.0.3" sources."sshpk-1.13.1" sources."statuses-1.4.0" @@ -37480,10 +38031,10 @@ in sources."stringstream-0.0.5" sources."strip-ansi-3.0.1" sources."strip-bom-2.0.0" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" - sources."type-is-1.6.15" + sources."type-is-1.6.16" (sources."uglify-js-2.8.29" // { dependencies = [ sources."source-map-0.5.7" @@ -37494,7 +38045,7 @@ in sources."util-deprecate-1.0.2" sources."utils-merge-1.0.1" sources."uuid-3.2.1" - sources."validate-npm-package-license-3.0.1" + sources."validate-npm-package-license-3.0.3" sources."vary-1.1.2" sources."verror-1.10.0" sources."which-module-1.0.0" @@ -37529,7 +38080,7 @@ in sha512 = "0i2j5pgw72bkg5s5crh3p534sz6m6yvbyg174kkgyj1l0sgaqmzj22xmh0dvxqk7r3rp79w2vs27gdqzb8azmlr6ag13m17h20cyhhf"; }; dependencies = [ - sources."addr-to-ip-port-1.4.2" + sources."addr-to-ip-port-1.4.3" sources."airplay-protocol-2.0.2" sources."airplayer-2.0.0" sources."ansi-escapes-1.4.0" @@ -37545,13 +38096,13 @@ in sources."bitfield-0.1.0" sources."bittorrent-dht-6.4.2" sources."bittorrent-tracker-7.7.0" - sources."blob-to-buffer-1.2.6" + sources."blob-to-buffer-1.2.7" sources."bn.js-4.11.8" sources."bncode-0.5.3" sources."bonjour-3.5.0" sources."bplist-creator-0.0.6" sources."bplist-parser-0.1.1" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."buffer-alloc-unsafe-1.0.0" sources."buffer-equal-0.0.1" sources."buffer-equals-1.0.4" @@ -37611,13 +38162,13 @@ in sources."ini-1.3.5" (sources."inquirer-1.2.3" // { dependencies = [ - sources."lodash-4.17.4" + sources."lodash-4.17.5" ]; }) sources."internal-ip-1.2.0" sources."ip-1.1.5" sources."ip-set-1.0.1" - sources."ipaddr.js-1.5.4" + sources."ipaddr.js-1.6.0" sources."is-arrayish-0.2.1" sources."is-builtin-module-1.0.0" sources."is-finite-1.0.2" @@ -37647,7 +38198,7 @@ in sources."minimist-1.2.0" sources."mkdirp-0.3.5" sources."ms-2.0.0" - sources."multicast-dns-6.2.2" + sources."multicast-dns-6.2.3" sources."multicast-dns-service-types-1.1.0" sources."mute-stream-0.0.6" sources."network-address-1.1.2" @@ -37687,26 +38238,26 @@ in sources."pinkie-2.0.4" sources."pinkie-promise-2.0.1" sources."plist-1.2.0" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."pump-1.0.3" sources."random-access-file-1.8.1" sources."random-iterate-1.0.1" sources."randombytes-2.0.6" sources."range-parser-1.2.0" - sources."rc-1.2.4" + sources."rc-1.2.5" sources."re-emitter-1.1.3" sources."read-pkg-1.1.0" sources."read-pkg-up-1.0.1" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."redent-1.0.0" sources."repeating-2.0.1" sources."restore-cursor-1.0.1" sources."reverse-http-1.3.0" sources."rimraf-2.6.2" sources."run-async-2.3.0" - sources."run-parallel-1.1.6" + sources."run-parallel-1.1.7" sources."run-series-1.1.4" - sources."rusha-0.8.12" + sources."rusha-0.8.13" sources."rx-4.1.0" sources."safe-buffer-5.1.1" sources."semver-5.5.0" @@ -37723,9 +38274,10 @@ in }) sources."single-line-log-1.1.2" sources."spawn-sync-1.0.15" - sources."spdx-correct-1.0.2" - sources."spdx-expression-parse-1.0.4" - sources."spdx-license-ids-1.2.2" + sources."spdx-correct-3.0.0" + sources."spdx-exceptions-2.1.0" + sources."spdx-expression-parse-3.0.0" + sources."spdx-license-ids-3.0.0" sources."speedometer-0.1.4" sources."stream-buffers-2.2.0" sources."string-width-1.0.2" @@ -37738,14 +38290,14 @@ in sources."supports-color-2.0.0" sources."thirty-two-1.0.2" sources."through-2.3.8" - sources."thunky-0.1.0" + sources."thunky-1.0.2" sources."tmp-0.0.29" (sources."torrent-discovery-5.4.0" // { dependencies = [ sources."bencode-0.8.0" sources."isarray-1.0.0" sources."minimist-1.2.0" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."string_decoder-1.0.3" ]; }) @@ -37764,7 +38316,6 @@ in sources."safe-buffer-5.0.1" sources."string_decoder-0.10.31" sources."thirty-two-0.0.2" - sources."thunky-1.0.2" sources."ultron-1.0.2" ]; }) @@ -37774,7 +38325,7 @@ in sources."uniq-1.0.1" sources."util-deprecate-1.0.2" sources."utp-0.0.7" - sources."validate-npm-package-license-3.0.1" + sources."validate-npm-package-license-3.0.3" sources."winreg-1.2.3" sources."wordwrap-0.0.3" sources."wrappy-1.0.2" @@ -37802,7 +38353,7 @@ in }; dependencies = [ sources."accepts-1.2.13" - sources."addr-to-ip-port-1.4.2" + sources."addr-to-ip-port-1.4.3" sources."after-0.8.2" sources."arraybuffer.slice-0.0.6" sources."async-0.2.10" @@ -37825,7 +38376,7 @@ in sources."bncode-0.5.3" sources."body-parser-1.13.3" sources."boom-0.3.8" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."buffer-alloc-unsafe-1.0.0" sources."buffer-equal-0.0.1" sources."buffer-equals-1.0.4" @@ -37837,7 +38388,7 @@ in sources."component-bind-1.0.0" sources."component-emitter-1.2.1" sources."component-inherit-0.0.3" - sources."compressible-2.0.12" + sources."compressible-2.0.13" sources."compression-1.5.2" sources."concat-map-0.0.1" (sources."connect-2.30.2" // { @@ -37954,8 +38505,8 @@ in }) sources."methods-1.1.2" sources."mime-1.3.4" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."mimic-response-1.0.0" sources."minimatch-3.0.4" sources."minimist-0.0.8" @@ -37991,7 +38542,7 @@ in ]; }) sources."pend-1.2.0" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."proxy-addr-1.0.10" sources."pump-1.0.3" sources."qs-6.5.1" @@ -38022,9 +38573,9 @@ in }) sources."rimraf-2.6.2" sources."rndm-1.2.0" - sources."run-parallel-1.1.6" + sources."run-parallel-1.1.7" sources."run-series-1.1.4" - sources."rusha-0.8.12" + sources."rusha-0.8.13" sources."safe-buffer-5.1.1" (sources."send-0.13.0" // { dependencies = [ @@ -38087,7 +38638,7 @@ in sources."mkdirp-0.3.5" sources."ms-2.0.0" sources."once-1.3.3" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."safe-buffer-5.0.1" sources."string_decoder-1.0.3" sources."ultron-1.1.1" @@ -38095,7 +38646,7 @@ in }) sources."tsscmp-1.0.5" sources."tunnel-agent-0.2.0" - sources."type-is-1.6.15" + sources."type-is-1.6.16" sources."uid-safe-2.1.4" sources."ultron-1.0.2" sources."uniq-1.0.1" @@ -38141,11 +38692,11 @@ in sources."bcrypt-pbkdf-1.0.1" sources."bl-1.0.3" sources."boom-2.10.1" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."caseless-0.11.0" sources."chalk-1.1.3" - sources."combined-stream-1.0.5" - sources."commander-2.13.0" + sources."combined-stream-1.0.6" + sources."commander-2.14.1" sources."concat-map-0.0.1" sources."concat-stream-1.5.0" sources."core-util-is-1.0.2" @@ -38176,7 +38727,8 @@ in sources."http-signature-1.1.1" sources."inflight-1.0.6" sources."inherits-2.0.3" - sources."is-my-json-valid-2.17.1" + sources."is-my-ip-valid-1.0.0" + sources."is-my-json-valid-2.17.2" sources."is-property-1.0.2" sources."is-stream-1.1.0" sources."is-typedarray-1.0.0" @@ -38195,9 +38747,9 @@ in }) sources."kew-0.7.0" sources."klaw-1.3.1" - sources."lodash-4.17.4" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."lodash-4.17.5" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mkdirp-0.5.0" @@ -38249,10 +38801,10 @@ in prettier = nodeEnv.buildNodePackage { name = "prettier"; packageName = "prettier"; - version = "1.10.2"; + version = "1.11.0"; src = fetchurl { - url = "https://registry.npmjs.org/prettier/-/prettier-1.10.2.tgz"; - sha512 = "1k0h7nzg4lg3lf86xy0z7adx2z7nhj8r1y7c5s0gwhfb7qn4qp0845w5agq9zy48ll7sldv7ak2haypkm7akspajvdq25hn0ahlvisd"; + url = "https://registry.npmjs.org/prettier/-/prettier-1.11.0.tgz"; + sha512 = "3xk1i02slbak5bilsgbsi5qh2f68dn84s1as0h2bymmiwm3isnazndlvl74yjwlmqxkaw9sj45c402xhy5xk5h0nkbcv39gqwyyfg75"; }; buildInputs = globalBuildInputs; meta = { @@ -38274,6 +38826,7 @@ in dependencies = [ sources."JSONStream-1.3.2" sources."acorn-4.0.13" + sources."acorn-node-1.3.0" sources."anymatch-1.3.2" sources."arr-diff-2.0.0" sources."arr-flatten-1.1.0" @@ -38281,23 +38834,23 @@ in sources."array-map-0.0.0" sources."array-reduce-0.0.0" sources."array-unique-0.2.1" - sources."asn1.js-4.9.2" + sources."asn1.js-4.10.1" sources."assert-1.4.1" sources."astw-2.2.0" sources."async-1.5.2" sources."async-each-1.0.1" sources."balanced-match-1.0.0" - sources."base64-js-1.2.1" + sources."base64-js-1.2.3" sources."binary-extensions-1.11.0" sources."bn.js-4.11.8" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" (sources."braces-1.8.5" // { dependencies = [ sources."kind-of-4.0.0" ]; }) sources."brorand-1.1.0" - sources."browser-pack-6.0.3" + sources."browser-pack-6.0.4" (sources."browser-resolve-1.11.2" // { dependencies = [ sources."resolve-1.1.7" @@ -38305,7 +38858,7 @@ in }) (sources."browserify-13.3.0" // { dependencies = [ - sources."acorn-5.3.0" + sources."acorn-5.5.0" sources."combine-source-map-0.7.2" (sources."concat-stream-1.5.2" // { dependencies = [ @@ -38314,6 +38867,7 @@ in }) sources."hash-base-2.0.2" sources."isarray-0.0.1" + sources."process-nextick-args-2.0.0" ]; }) sources."browserify-aes-1.1.1" @@ -38403,7 +38957,7 @@ in sources."kind-of-3.2.2" sources."labeled-stream-splicer-2.0.0" sources."lexical-scope-1.2.0" - sources."lodash-4.17.4" + sources."lodash-4.17.5" sources."lodash.memoize-3.0.4" sources."md5.js-1.3.4" sources."micromatch-2.3.11" @@ -38415,7 +38969,7 @@ in sources."minimist-1.2.0" sources."module-deps-4.1.1" sources."mute-stream-0.0.7" - sources."nan-2.8.0" + sources."nan-2.9.2" (sources."node-static-0.7.10" // { dependencies = [ sources."minimist-0.0.10" @@ -38454,10 +39008,10 @@ in ]; }) sources."randombytes-2.0.6" - sources."randomfill-1.0.3" + sources."randomfill-1.0.4" sources."read-1.0.7" sources."read-only-stream-2.0.0" - (sources."readable-stream-2.3.3" // { + (sources."readable-stream-2.3.4" // { dependencies = [ sources."isarray-1.0.0" sources."string_decoder-1.0.3" @@ -38484,18 +39038,14 @@ in sources."string-stream-0.0.7" sources."string_decoder-0.10.31" sources."subarg-1.0.0" - (sources."syntax-error-1.3.0" // { - dependencies = [ - sources."acorn-4.0.13" - ]; - }) + sources."syntax-error-1.4.0" sources."temp-0.8.3" sources."through-2.3.8" sources."through2-2.0.3" sources."timers-browserify-1.4.2" sources."to-arraybuffer-1.0.1" sources."tree-kill-1.2.0" - sources."tty-browserify-0.0.0" + sources."tty-browserify-0.0.1" sources."typedarray-0.0.6" sources."umd-3.0.1" (sources."url-0.11.0" // { @@ -38538,6 +39088,8 @@ in sha1 = "195a2a5b6dd76e4a244a807002678b037d70eeaa"; }; dependencies = [ + sources."@types/babel-types-7.0.1" + sources."@types/babylon-6.16.2" sources."accepts-1.3.4" sources."acorn-3.3.0" (sources."acorn-globals-3.1.0" // { @@ -38558,6 +39110,9 @@ in sources."asynckit-0.4.0" sources."aws-sign2-0.6.0" sources."aws4-1.6.0" + sources."babel-runtime-6.26.0" + sources."babel-types-6.26.0" + sources."babylon-6.18.0" sources."basic-auth-2.0.0" sources."bcrypt-pbkdf-1.0.1" sources."bindings-1.2.1" @@ -38575,15 +39130,16 @@ in sources."cliui-2.1.0" sources."co-4.6.0" sources."code-point-at-1.1.0" - sources."combined-stream-1.0.5" - sources."commander-2.13.0" + sources."combined-stream-1.0.6" + sources."commander-2.14.1" sources."console-control-strings-1.1.0" - sources."constantinople-3.1.0" + sources."constantinople-3.1.2" sources."content-disposition-0.5.2" sources."content-type-1.0.4" sources."cookie-0.3.1" sources."cookie-parser-1.4.3" sources."cookie-signature-1.0.6" + sources."core-js-2.5.3" sources."core-util-is-1.0.2" sources."cryptiles-2.0.5" sources."dashdash-1.14.1" @@ -38599,8 +39155,9 @@ in sources."ee-first-1.1.1" sources."encodeurl-1.0.2" sources."end-of-stream-1.4.1" - sources."errno-0.1.6" + sources."errno-0.1.7" sources."escape-html-1.0.3" + sources."esutils-2.0.2" sources."etag-1.8.1" sources."eventemitter2-3.0.2" sources."expand-template-1.1.0" @@ -38641,10 +39198,10 @@ in sources."inherits-2.0.3" sources."ini-1.3.5" sources."int64-buffer-0.1.10" - sources."ipaddr.js-1.5.2" + sources."ipaddr.js-1.6.0" sources."is-3.2.1" sources."is-buffer-1.1.6" - sources."is-expression-2.1.0" + sources."is-expression-3.0.0" sources."is-fullwidth-code-point-1.0.0" sources."is-promise-2.1.0" sources."is-regex-1.0.4" @@ -38672,13 +39229,14 @@ in }) sources."less-middleware-2.2.1" sources."libquassel-2.1.9" + sources."lodash-4.17.5" sources."longest-1.0.1" sources."media-typer-0.3.0" sources."merge-descriptors-1.0.1" sources."methods-1.1.2" sources."mime-1.4.1" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimist-0.0.8" sources."mkdirp-0.5.1" sources."morgan-1.9.0" @@ -38692,7 +39250,7 @@ in sources."tunnel-agent-0.4.3" ]; }) - sources."node-abi-2.1.2" + sources."node-abi-2.3.0" sources."node.extend-2.0.0" sources."noop-logger-0.1.1" sources."npmlog-4.1.2" @@ -38708,15 +39266,14 @@ in sources."path-to-regexp-0.1.7" sources."performance-now-0.2.0" sources."prebuild-install-2.1.2" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."promise-7.3.1" - sources."proxy-addr-2.0.2" + sources."proxy-addr-2.0.3" sources."prr-1.0.1" (sources."pug-2.0.0-rc.4" // { dependencies = [ sources."acorn-4.0.13" sources."commander-2.8.1" - sources."is-expression-3.0.0" sources."source-map-0.4.4" ]; }) @@ -38741,8 +39298,9 @@ in sources."qtdatastream-0.7.1" sources."range-parser-1.2.0" sources."raw-body-2.3.2" - sources."rc-1.2.4" - sources."readable-stream-2.3.3" + sources."rc-1.2.5" + sources."readable-stream-2.3.4" + sources."regenerator-runtime-0.11.1" sources."repeat-string-1.6.1" sources."request-2.81.0" sources."resolve-1.5.0" @@ -38777,11 +39335,12 @@ in sources."strip-json-comments-2.0.1" sources."tar-fs-1.16.0" sources."tar-stream-1.5.5" + sources."to-fast-properties-1.0.3" sources."token-stream-0.0.1" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" - sources."type-is-1.6.15" + sources."type-is-1.6.16" sources."uglify-js-2.8.29" sources."uglify-to-browserify-1.0.2" sources."ultron-1.1.1" @@ -38820,13 +39379,13 @@ in sha1 = "da6ac7d4d7777a59a5e951cf46e72fd4b6b40a2c"; }; dependencies = [ - sources."acorn-5.3.0" + sources."acorn-5.5.0" sources."amdefine-1.0.1" sources."ast-types-0.9.6" sources."balanced-match-1.0.0" sources."base62-0.1.1" - sources."brace-expansion-1.1.8" - sources."commander-2.13.0" + sources."brace-expansion-1.1.11" + sources."commander-2.14.1" sources."commoner-0.10.8" sources."concat-map-0.0.1" sources."defined-1.0.0" @@ -38876,7 +39435,7 @@ in sources."ansi-styles-2.2.1" sources."async-0.2.10" sources."balanced-match-1.0.0" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."chalk-1.1.3" sources."colors-0.6.2" sources."concat-map-0.0.1" @@ -38951,7 +39510,7 @@ in sources."caseless-0.12.0" sources."co-4.6.0" sources."coffee-script-1.6.3" - sources."combined-stream-1.0.5" + sources."combined-stream-1.0.6" sources."commander-2.0.0" (sources."connect-2.11.0" // { dependencies = [ @@ -38992,17 +39551,17 @@ in }) sources."extend-3.0.1" sources."extsprintf-1.3.0" - sources."fast-deep-equal-1.0.0" + sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."forever-agent-0.6.1" - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."formidable-1.0.11" sources."fresh-0.2.0" sources."getpass-0.1.7" sources."har-schema-2.0.0" sources."har-validator-5.0.3" sources."hawk-6.0.2" - sources."hoek-4.2.0" + sources."hoek-4.2.1" sources."http-auth-2.0.7" sources."http-signature-1.2.0" sources."inherits-2.0.3" @@ -39017,8 +39576,8 @@ in sources."keypress-0.1.0" sources."methods-0.1.0" sources."mime-1.2.11" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."mkdirp-0.3.5" sources."ms-2.0.0" sources."multiparty-2.2.0" @@ -39051,7 +39610,7 @@ in sources."string-1.6.1" sources."string_decoder-0.10.31" sources."stringstream-0.0.5" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" sources."uid2-0.0.3" @@ -39087,13 +39646,17 @@ in serve = nodeEnv.buildNodePackage { name = "serve"; packageName = "serve"; - version = "6.4.9"; + version = "6.5.0"; src = fetchurl { - url = "https://registry.npmjs.org/serve/-/serve-6.4.9.tgz"; - sha512 = "2241nrhci4lgj15pxzvspx6m3vjdpcsih532sz1mi17fby8yiadv33d84v05z1465cszh35xhzf7kx3yirwzq5zbi7zvzhw13ddsqy0"; + url = "https://registry.npmjs.org/serve/-/serve-6.5.0.tgz"; + sha512 = "3jvih9f09fhgz59n8j1nb607wvhwailsnw1x98zqrq8rig5rc2a6dc3v3r2mw4mnvbgg5jnpiss440jfm9gbrymf985hqw1wlngbyf2"; }; dependencies = [ - sources."@zeit/check-updates-1.0.5" + (sources."@zeit/check-updates-1.1.0" // { + dependencies = [ + sources."chalk-2.3.0" + ]; + }) sources."accepts-1.3.4" sources."address-1.0.3" sources."align-text-0.1.4" @@ -39115,9 +39678,14 @@ in sources."camelcase-4.1.0" sources."capture-stack-trace-1.0.0" sources."center-align-0.1.3" - sources."chalk-2.3.0" + (sources."chalk-2.3.1" // { + dependencies = [ + sources."has-flag-3.0.0" + sources."supports-color-5.2.0" + ]; + }) sources."cli-boxes-1.0.0" - (sources."clipboardy-1.2.2" // { + (sources."clipboardy-1.2.3" // { dependencies = [ sources."execa-0.8.0" ]; @@ -39125,8 +39693,8 @@ in sources."cliui-2.1.0" sources."color-convert-1.9.1" sources."color-name-1.1.3" - sources."compressible-2.0.12" - sources."compression-1.7.1" + sources."compressible-2.0.13" + sources."compression-1.7.2" sources."configstore-3.1.1" sources."content-type-1.0.4" sources."create-error-class-3.0.2" @@ -39151,7 +39719,7 @@ in sources."escape-string-regexp-1.0.5" sources."etag-1.8.1" sources."execa-0.7.0" - sources."filesize-3.5.11" + sources."filesize-3.6.0" sources."fresh-0.5.2" sources."fs-extra-5.0.0" sources."get-stream-3.0.0" @@ -39188,20 +39756,16 @@ in sources."kind-of-3.2.2" sources."latest-version-3.1.0" sources."lazy-cache-1.0.4" - sources."lodash-4.17.4" + sources."lodash-4.17.5" sources."longest-1.0.1" sources."lowercase-keys-1.0.0" sources."lru-cache-4.1.1" - sources."make-dir-1.1.0" + sources."make-dir-1.2.0" sources."micro-9.1.0" sources."micro-compress-1.0.0" sources."mime-1.4.1" - sources."mime-db-1.32.0" - (sources."mime-types-2.1.17" // { - dependencies = [ - sources."mime-db-1.30.0" - ]; - }) + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimist-1.2.0" sources."mri-1.1.0" sources."ms-2.1.1" @@ -39211,7 +39775,7 @@ in sources."on-finished-2.3.0" sources."on-headers-1.0.1" sources."openssl-self-signed-certificate-1.1.6" - sources."opn-5.1.0" + sources."opn-5.2.0" sources."optimist-0.6.1" sources."p-finally-1.0.0" sources."package-json-4.0.1" @@ -39224,18 +39788,18 @@ in sources."pseudomap-1.0.2" sources."range-parser-1.2.0" sources."raw-body-2.3.2" - sources."rc-1.2.4" - sources."registry-auth-token-3.3.1" + sources."rc-1.2.5" + sources."registry-auth-token-3.3.2" sources."registry-url-3.1.0" sources."repeat-string-1.6.1" sources."right-align-0.1.3" sources."safe-buffer-5.1.1" sources."semver-5.5.0" sources."semver-diff-2.1.0" - (sources."send-0.16.1" // { + (sources."send-0.16.2" // { dependencies = [ + sources."depd-1.1.2" sources."ms-2.0.0" - sources."statuses-1.3.1" ]; }) sources."setprototypeof-1.0.3" @@ -39326,8 +39890,8 @@ in ]; }) sources."co-4.6.0" - sources."combined-stream-1.0.5" - sources."commander-2.13.0" + sources."combined-stream-1.0.6" + sources."commander-2.14.1" sources."component-bind-1.0.0" sources."component-emitter-1.1.2" sources."component-inherit-0.0.3" @@ -39369,11 +39933,11 @@ in sources."express-4.16.2" sources."extend-3.0.1" sources."extsprintf-1.3.0" - sources."fast-deep-equal-1.0.0" + sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."finalhandler-1.1.0" sources."forever-agent-0.6.1" - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."forwarded-0.1.2" sources."fresh-0.5.2" sources."from-0.1.7" @@ -39384,7 +39948,7 @@ in sources."has-binary-data-0.1.1" sources."has-cors-1.0.3" sources."hawk-6.0.2" - sources."hoek-4.2.0" + sources."hoek-4.2.1" (sources."htmlparser2-3.7.3" // { dependencies = [ sources."entities-1.0.0" @@ -39399,7 +39963,7 @@ in sources."iconv-lite-0.4.19" sources."indexof-0.0.1" sources."inherits-2.0.3" - sources."ipaddr.js-1.5.2" + sources."ipaddr.js-1.6.0" sources."irc-replies-2.0.1" sources."is-typedarray-1.0.0" sources."isarray-0.0.1" @@ -39417,8 +39981,8 @@ in sources."merge-descriptors-1.0.1" sources."methods-1.1.2" sources."mime-1.4.1" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimist-0.0.8" sources."mkdirp-0.5.1" sources."moment-2.7.0" @@ -39437,7 +40001,7 @@ in sources."path-to-regexp-0.1.7" sources."pause-stream-0.0.11" sources."performance-now-2.1.0" - sources."proxy-addr-2.0.2" + sources."proxy-addr-2.0.3" sources."punycode-1.4.1" sources."qs-6.5.1" sources."range-parser-1.2.0" @@ -39479,10 +40043,10 @@ in sources."through-2.3.8" sources."tinycolor-0.0.1" sources."to-array-0.1.3" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" - sources."type-is-1.6.15" + sources."type-is-1.6.16" sources."unpipe-1.0.0" sources."utf8-2.0.0" sources."utils-merge-1.0.1" @@ -39515,7 +40079,7 @@ in sources."ajv-5.5.2" sources."amdefine-1.0.1" sources."ansi-styles-3.2.0" - sources."argparse-1.0.9" + sources."argparse-1.0.10" sources."array-flatten-2.1.1" sources."array-uniq-1.0.3" sources."asn1-0.2.3" @@ -39535,7 +40099,7 @@ in ]; }) sources."boom-4.3.1" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" (sources."bunyan-1.8.12" // { dependencies = [ sources."minimatch-3.0.4" @@ -39543,14 +40107,14 @@ in }) sources."bytes-1.0.0" sources."caseless-0.12.0" - sources."chalk-2.3.0" + sources."chalk-2.3.1" sources."co-4.6.0" sources."color-convert-1.9.1" sources."color-name-1.1.3" - sources."combined-stream-1.0.5" - sources."commander-2.13.0" - sources."compressible-2.0.12" - (sources."compression-1.7.1" // { + sources."combined-stream-1.0.6" + sources."commander-2.14.1" + sources."compressible-2.0.13" + (sources."compression-1.7.2" // { dependencies = [ sources."bytes-3.0.0" ]; @@ -39580,7 +40144,7 @@ in }) sources."domelementtype-1.3.0" sources."domhandler-2.4.1" - sources."domutils-1.6.2" + sources."domutils-1.7.0" sources."dtrace-provider-0.8.6" sources."ecc-jsbn-0.1.1" sources."ee-first-1.1.1" @@ -39595,11 +40159,11 @@ in sources."express-json5-0.1.0" sources."extend-3.0.1" sources."extsprintf-1.3.0" - sources."fast-deep-equal-1.0.0" + sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."finalhandler-1.0.6" sources."forever-agent-0.6.1" - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."forwarded-0.1.2" sources."fresh-0.5.2" sources."fs-ext-0.6.0" @@ -39612,10 +40176,10 @@ in }) sources."har-schema-2.0.0" sources."har-validator-5.0.3" - sources."has-flag-2.0.0" + sources."has-flag-3.0.0" sources."hawk-6.0.2" sources."highlight.js-8.9.1" - sources."hoek-4.2.0" + sources."hoek-4.2.1" sources."htmlparser2-3.9.2" (sources."http-errors-1.6.2" // { dependencies = [ @@ -39642,7 +40206,9 @@ in sources."linkify-it-1.2.4" sources."lodash.clonedeep-4.5.0" sources."lodash.escaperegexp-4.1.2" - sources."lodash.mergewith-4.6.0" + sources."lodash.isplainobject-4.0.6" + sources."lodash.isstring-4.0.1" + sources."lodash.mergewith-4.6.1" sources."lru-cache-2.7.3" sources."lunr-0.7.2" sources."markdown-it-4.4.0" @@ -39651,15 +40217,15 @@ in sources."merge-descriptors-1.0.1" sources."methods-1.1.2" sources."mime-1.3.4" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimatch-1.0.0" sources."minimist-0.0.8" sources."mkdirp-0.5.1" sources."moment-2.20.1" sources."ms-2.0.0" sources."mv-2.1.1" - sources."nan-2.8.0" + sources."nan-2.9.2" sources."ncp-2.0.0" sources."negotiator-0.6.1" sources."number-is-nan-1.0.1" @@ -39672,8 +40238,8 @@ in sources."path-is-absolute-1.0.1" sources."path-to-regexp-0.1.7" sources."performance-now-2.1.0" - sources."postcss-6.0.16" - sources."process-nextick-args-1.0.7" + sources."postcss-6.0.19" + sources."process-nextick-args-2.0.0" sources."proxy-addr-1.1.5" sources."punycode-1.4.1" sources."qs-6.5.0" @@ -39687,9 +40253,8 @@ in }) (sources."render-readme-1.3.1" // { dependencies = [ - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."source-map-0.6.1" - sources."supports-color-5.1.0" ]; }) (sources."request-2.83.0" // { @@ -39705,8 +40270,8 @@ in ]; }) sources."safe-buffer-5.1.1" - sources."safe-json-stringify-1.0.4" - sources."sanitize-html-1.17.0" + sources."safe-json-stringify-1.1.0" + sources."sanitize-html-1.18.2" sources."semver-4.3.6" sources."send-0.15.6" sources."serve-static-1.12.6" @@ -39721,13 +40286,13 @@ in sources."statuses-1.3.1" sources."string_decoder-1.0.3" sources."stringstream-0.0.5" - sources."supports-color-4.5.0" + sources."supports-color-5.2.0" sources."through-2.3.8" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" - sources."type-is-1.6.15" - sources."uc.micro-1.0.3" + sources."type-is-1.6.16" + sources."uc.micro-1.0.5" sources."uglify-js-2.3.6" sources."unpipe-1.0.0" sources."util-deprecate-1.0.2" @@ -39762,7 +40327,7 @@ in dependencies = [ sources."async-2.1.5" sources."balanced-match-1.0.0" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."cli-table-0.3.1" sources."colors-1.0.3" sources."commander-2.9.0" @@ -39772,10 +40337,10 @@ in sources."graceful-readlink-1.0.1" sources."inherits-2.0.3" sources."isarray-1.0.0" - sources."lodash-4.17.4" + sources."lodash-4.17.5" sources."minimatch-3.0.4" - sources."process-nextick-args-1.0.7" - sources."readable-stream-2.3.3" + sources."process-nextick-args-2.0.0" + sources."readable-stream-2.3.4" sources."readdirp-2.1.0" sources."safe-buffer-5.1.1" sources."set-immediate-shim-1.0.1" @@ -39805,7 +40370,7 @@ in sources."assert-plus-0.1.5" sources."backoff-2.5.0" sources."balanced-match-1.0.0" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."bunyan-1.5.1" sources."clone-0.1.6" sources."cmdln-3.2.1" @@ -39838,7 +40403,7 @@ in sources."minimist-0.0.8" sources."mkdirp-0.5.1" sources."mv-2.1.1" - sources."nan-2.8.0" + sources."nan-2.9.2" sources."ncp-2.0.0" sources."negotiator-0.5.3" sources."node-uuid-1.4.8" @@ -39846,9 +40411,9 @@ in sources."once-1.4.0" sources."path-is-absolute-1.0.1" sources."precond-0.2.3" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."qs-3.1.0" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" (sources."restify-4.0.3" // { dependencies = [ sources."lru-cache-2.7.3" @@ -39861,7 +40426,7 @@ in }) sources."rimraf-2.4.5" sources."safe-buffer-5.1.1" - sources."safe-json-stringify-1.0.4" + sources."safe-json-stringify-1.1.0" sources."semver-4.3.6" (sources."smartdc-auth-2.3.1" // { dependencies = [ @@ -39936,7 +40501,7 @@ in sha1 = "c1a4590ceff87ecf13c72652f046f716b29e6014"; }; dependencies = [ - sources."accepts-1.3.3" + sources."accepts-1.3.4" sources."after-0.8.2" sources."arraybuffer.slice-0.0.7" sources."async-limiter-1.0.0" @@ -39951,15 +40516,23 @@ in sources."component-inherit-0.0.3" sources."cookie-0.3.1" sources."debug-2.6.9" - sources."engine.io-3.1.4" - sources."engine.io-client-3.1.4" + (sources."engine.io-3.1.5" // { + dependencies = [ + sources."debug-3.1.0" + ]; + }) + (sources."engine.io-client-3.1.5" // { + dependencies = [ + sources."debug-3.1.0" + ]; + }) sources."engine.io-parser-2.1.2" sources."has-binary2-1.0.2" sources."has-cors-1.1.0" sources."indexof-0.0.1" sources."isarray-2.0.1" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."ms-2.0.0" sources."negotiator-0.6.1" sources."object-component-0.0.3" @@ -39968,10 +40541,14 @@ in sources."safe-buffer-5.1.1" sources."socket.io-adapter-1.1.1" sources."socket.io-client-2.0.4" - sources."socket.io-parser-3.1.2" + (sources."socket.io-parser-3.1.3" // { + dependencies = [ + sources."debug-3.1.0" + ]; + }) sources."to-array-0.1.4" sources."ultron-1.1.1" - sources."uws-0.14.5" + sources."uws-9.14.0" sources."ws-3.3.3" sources."xmlhttprequest-ssl-1.5.5" sources."yeast-0.1.2" @@ -40017,7 +40594,7 @@ in sources."hashring-3.2.0" sources."keypress-0.1.0" sources."modern-syslog-1.1.2" - sources."nan-2.8.0" + sources."nan-2.9.2" sources."sequence-2.2.1" sources."simple-lru-cache-0.0.2" sources."winser-0.1.6" @@ -40079,7 +40656,7 @@ in dependencies = [ sources."amdefine-1.0.1" sources."balanced-match-1.0.0" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."concat-map-0.0.1" sources."css-parse-1.7.0" sources."debug-3.1.0" @@ -40109,13 +40686,13 @@ in svgo = nodeEnv.buildNodePackage { name = "svgo"; packageName = "svgo"; - version = "1.0.3"; + version = "1.0.5"; src = fetchurl { - url = "https://registry.npmjs.org/svgo/-/svgo-1.0.3.tgz"; - sha512 = "1f9s0zk5rrb842w5gibjarlc9qw8bmjcxnbxc8jjn8is4d6c9l66ajwvifw87yx3pis6dcinyjwvvkxvzpyp326nl72vjv9rw5ndxnp"; + url = "https://registry.npmjs.org/svgo/-/svgo-1.0.5.tgz"; + sha512 = "0z83qdi781ax865bpw8ywmp5dyljjwnan5f9lgja0zcyr8niycd0x35yqw7chwmh3wpps4ai1lkswybk8mjnjik526vdvw1z1zf52lx"; }; dependencies = [ - sources."argparse-1.0.9" + sources."argparse-1.0.10" sources."boolbase-1.0.0" sources."coa-2.0.1" sources."colors-1.1.2" @@ -40184,11 +40761,11 @@ in dependencies = [ sources."acorn-4.0.13" sources."balanced-match-1.0.0" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."concat-map-0.0.1" sources."core-util-is-1.0.2" sources."enhanced-resolve-2.3.0" - sources."errno-0.1.6" + sources."errno-0.1.7" sources."fs.realpath-1.0.0" sources."glob-7.1.2" sources."graceful-fs-4.1.11" @@ -40200,9 +40777,9 @@ in sources."object-assign-4.1.1" sources."once-1.4.0" sources."path-is-absolute-1.0.1" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."prr-1.0.1" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."resolve-from-2.0.0" sources."safe-buffer-5.1.1" sources."string_decoder-1.0.3" @@ -40247,8 +40824,8 @@ in sources."chalk-1.1.3" sources."cliui-2.1.0" sources."colors-1.1.2" - sources."combined-stream-1.0.5" - sources."commander-2.13.0" + sources."combined-stream-1.0.6" + sources."commander-2.14.1" sources."core-util-is-1.0.2" sources."cryptiles-2.0.5" sources."cycle-1.0.3" @@ -40280,7 +40857,8 @@ in sources."http-signature-1.1.1" sources."humanize-0.0.9" sources."is-buffer-1.1.6" - sources."is-my-json-valid-2.17.1" + sources."is-my-ip-valid-1.0.0" + sources."is-my-json-valid-2.17.2" sources."is-property-1.0.2" sources."is-typedarray-1.0.0" sources."isstream-0.1.2" @@ -40297,11 +40875,11 @@ in sources."keypress-0.2.1" sources."kind-of-3.2.2" sources."lazy-cache-1.0.4" - sources."lodash-4.17.4" + sources."lodash-4.17.5" sources."longest-1.0.1" sources."longjohn-0.2.11" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimist-0.0.10" sources."moment-2.16.0" (sources."node-appc-0.2.41" // { @@ -40339,7 +40917,7 @@ in sources."strip-ansi-3.0.1" sources."supports-color-2.0.0" sources."temp-0.8.3" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."tunnel-agent-0.4.3" sources."tweetnacl-0.14.5" (sources."uglify-js-2.7.5" // { @@ -40375,10 +40953,10 @@ in typescript = nodeEnv.buildNodePackage { name = "typescript"; packageName = "typescript"; - version = "2.6.2"; + version = "2.7.2"; src = fetchurl { - url = "https://registry.npmjs.org/typescript/-/typescript-2.6.2.tgz"; - sha1 = "3c5b6fd7f6de0914269027f03c0946758f7673a4"; + url = "https://registry.npmjs.org/typescript/-/typescript-2.7.2.tgz"; + sha512 = "2gjv6xyp9rqfdfqadayc4b36b79sjdiwsxa38z43v01cdn3xbc06ax90mjv36hxj9j96nfbwr6w1wn7n0zq8f3y3fw4jfy0j1hw5557"; }; buildInputs = globalBuildInputs; meta = { @@ -40411,7 +40989,7 @@ in sources."balanced-match-1.0.0" sources."bluebird-3.5.1" sources."boxen-1.3.0" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."camelcase-4.1.0" sources."capture-stack-trace-1.0.0" sources."chalk-1.1.3" @@ -40427,7 +41005,7 @@ in sources."color-convert-1.9.1" sources."color-name-1.1.3" sources."columnify-1.5.4" - sources."combined-stream-1.0.5" + sources."combined-stream-1.0.6" sources."concat-map-0.0.1" sources."concat-stream-1.6.0" sources."configstore-3.1.1" @@ -40448,7 +41026,7 @@ in sources."execa-0.7.0" sources."exit-hook-1.1.1" sources."extend-3.0.1" - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."fs.realpath-1.0.0" sources."function-bind-1.1.1" sources."get-stream-3.0.0" @@ -40458,7 +41036,7 @@ in sources."graceful-fs-4.1.11" sources."has-1.0.1" sources."has-ansi-2.0.0" - sources."has-flag-2.0.0" + sources."has-flag-3.0.0" sources."has-unicode-2.0.1" sources."http-proxy-agent-1.0.0" sources."https-proxy-agent-1.0.0" @@ -40467,7 +41045,7 @@ in sources."inflight-1.0.6" sources."inherits-2.0.3" sources."ini-1.3.5" - sources."invariant-2.2.2" + sources."invariant-2.2.3" sources."is-absolute-0.2.6" sources."is-arrayish-0.2.1" sources."is-fullwidth-code-point-2.0.0" @@ -40494,11 +41072,11 @@ in sources."loose-envify-1.3.1" sources."lowercase-keys-1.0.0" sources."lru-cache-4.1.1" - sources."make-dir-1.1.0" - sources."make-error-1.3.2" + sources."make-dir-1.2.0" + sources."make-error-1.3.4" sources."make-error-cause-1.2.2" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimatch-3.0.4" sources."minimist-1.2.0" sources."mkdirp-0.5.1" @@ -40521,17 +41099,17 @@ in sources."popsicle-rewrite-1.0.0" sources."popsicle-status-2.0.1" sources."prepend-http-1.0.4" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."promise-finally-3.0.0" sources."pseudomap-1.0.2" sources."punycode-1.4.1" - (sources."rc-1.2.4" // { + (sources."rc-1.2.5" // { dependencies = [ sources."minimist-1.2.0" ]; }) - sources."readable-stream-2.3.3" - sources."registry-auth-token-3.3.1" + sources."readable-stream-2.3.4" + sources."registry-auth-token-3.3.2" sources."registry-url-3.1.0" sources."restore-cursor-1.0.1" sources."rimraf-2.6.2" @@ -40556,9 +41134,9 @@ in sources."throat-3.2.0" sources."timed-out-4.0.1" sources."touch-1.0.0" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."typedarray-0.0.6" - sources."typescript-2.6.2" + sources."typescript-2.7.2" (sources."typings-core-2.3.3" // { dependencies = [ sources."minimist-0.0.8" @@ -40570,9 +41148,9 @@ in (sources."update-notifier-2.3.0" // { dependencies = [ sources."ansi-styles-3.2.0" - sources."chalk-2.3.0" + sources."chalk-2.3.1" sources."semver-5.5.0" - sources."supports-color-4.5.0" + sources."supports-color-5.2.0" ]; }) sources."url-parse-lax-1.0.0" @@ -40600,13 +41178,13 @@ in uglify-js = nodeEnv.buildNodePackage { name = "uglify-js"; packageName = "uglify-js"; - version = "3.3.8"; + version = "3.3.12"; src = fetchurl { - url = "https://registry.npmjs.org/uglify-js/-/uglify-js-3.3.8.tgz"; - sha512 = "1vxvyq08n6jidg18kiph7m0bjzr4v1dh188b7zgj60mkv4x1qkqrgc8756drldaj3awmn71mwsxja0zhvdm8nqqw5finrajv8dc0j2z"; + url = "https://registry.npmjs.org/uglify-js/-/uglify-js-3.3.12.tgz"; + sha512 = "166ccv37fz5bsnwpp0n0xqxx63pdg8d4hxhac79k61n47l69mcw7sp5g3c68y98x867da1w1bnv5ryisvsjsj639sbpdl2mg56nng72"; }; dependencies = [ - sources."commander-2.13.0" + sources."commander-2.14.1" sources."source-map-0.6.1" ]; buildInputs = globalBuildInputs; @@ -40621,10 +41199,10 @@ in ungit = nodeEnv.buildNodePackage { name = "ungit"; packageName = "ungit"; - version = "1.4.7"; + version = "1.4.10"; src = fetchurl { - url = "https://registry.npmjs.org/ungit/-/ungit-1.4.7.tgz"; - sha512 = "1fg2pwdf3d1qnlly7y0kpm8ghx56kc35993ww9v4xgpkdn7ga1s53190yjsifi6dj6j3v6602y8dnr5y0jyp4qm6v4rdb385dw5p2xs"; + url = "https://registry.npmjs.org/ungit/-/ungit-1.4.10.tgz"; + sha512 = "0l2pf7nl7pkc8kq77agwg5s5c21wd3rl10l42l6xk6s3bkdv8l0vhlrvzampasaraikblyjh0sq81rqym3whn2jfspqhivllpkb8iqp"; }; dependencies = [ sources."abbrev-1.1.1" @@ -40654,7 +41232,7 @@ in sources."blueimp-md5-2.10.0" sources."body-parser-1.18.2" sources."boom-4.3.1" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."builtin-modules-1.1.1" sources."builtins-1.0.3" sources."bytes-3.0.0" @@ -40713,11 +41291,19 @@ in }) sources."eachr-3.2.0" sources."ecc-jsbn-0.1.1" - sources."editions-1.3.3" + sources."editions-1.3.4" sources."ee-first-1.1.1" sources."encodeurl-1.0.2" - sources."engine.io-3.1.4" - sources."engine.io-client-3.1.4" + (sources."engine.io-3.1.5" // { + dependencies = [ + sources."debug-3.1.0" + ]; + }) + (sources."engine.io-client-3.1.5" // { + dependencies = [ + sources."debug-3.1.0" + ]; + }) sources."engine.io-parser-2.1.2" sources."escape-html-1.0.3" sources."etag-1.8.1" @@ -40725,6 +41311,7 @@ in sources."execa-0.7.0" (sources."express-4.16.2" // { dependencies = [ + sources."serve-static-1.13.1" sources."setprototypeof-1.1.0" sources."statuses-1.3.1" ]; @@ -40734,7 +41321,7 @@ in sources."extract-opts-3.3.1" sources."extsprintf-1.3.0" sources."eyes-0.1.8" - sources."fast-deep-equal-1.0.0" + sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."finalhandler-1.1.0" sources."find-up-2.1.0" @@ -40758,7 +41345,7 @@ in sources."has-unicode-2.0.1" sources."hasher-1.2.0" sources."hawk-6.0.2" - sources."hoek-4.2.0" + sources."hoek-4.2.1" sources."hogan.js-3.0.2" sources."hosted-git-info-2.5.0" (sources."http-errors-1.6.2" // { @@ -40774,7 +41361,7 @@ in sources."inherits-2.0.3" sources."ini-1.3.5" sources."invert-kv-1.0.0" - sources."ipaddr.js-1.5.2" + sources."ipaddr.js-1.6.0" sources."is-arrayish-0.3.1" sources."is-builtin-module-1.0.0" sources."is-fullwidth-code-point-1.0.0" @@ -40801,7 +41388,7 @@ in sources."knockout-3.5.0-beta" sources."lcid-1.0.0" sources."locate-path-2.0.0" - sources."lodash-4.17.4" + sources."lodash-4.17.5" sources."lru-cache-4.1.1" sources."lsmod-1.0.0" sources."media-typer-0.3.0" @@ -40814,9 +41401,9 @@ in sources."merge-descriptors-1.0.1" sources."methods-1.1.2" sources."mime-1.4.1" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" - sources."mimic-fn-1.1.0" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" + sources."mimic-fn-1.2.0" sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mkdirp-0.5.1" @@ -40830,12 +41417,12 @@ in sources."npm-package-arg-5.1.2" (sources."npm-registry-client-8.5.0" // { dependencies = [ - sources."combined-stream-1.0.5" + sources."combined-stream-1.0.6" sources."delayed-stream-1.0.0" sources."extend-3.0.1" - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."isarray-1.0.0" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."string_decoder-1.0.3" ]; }) @@ -40854,7 +41441,7 @@ in sources."os-homedir-1.0.2" sources."os-locale-2.1.0" sources."os-tmpdir-1.0.2" - sources."osenv-0.1.4" + sources."osenv-0.1.5" sources."p-finally-1.0.0" sources."p-limit-1.2.0" sources."p-locate-2.0.0" @@ -40871,8 +41458,8 @@ in sources."path-to-regexp-0.1.7" sources."pause-0.0.1" sources."performance-now-2.1.0" - sources."process-nextick-args-1.0.7" - sources."proxy-addr-2.0.2" + sources."process-nextick-args-2.0.0" + sources."proxy-addr-2.0.3" sources."pseudomap-1.0.2" sources."punycode-1.4.1" sources."qs-6.5.1" @@ -40884,7 +41471,7 @@ in ]; }) sources."raw-body-2.3.2" - (sources."rc-1.2.4" // { + (sources."rc-1.2.5" // { dependencies = [ sources."minimist-1.2.0" ]; @@ -40899,7 +41486,11 @@ in sources."safe-buffer-5.1.1" sources."semver-5.4.1" sources."send-0.16.1" - sources."serve-static-1.13.1" + (sources."serve-static-1.13.2" // { + dependencies = [ + sources."send-0.16.2" + ]; + }) sources."set-blocking-2.0.0" sources."setprototypeof-1.0.3" sources."shebang-command-1.2.0" @@ -40912,17 +41503,21 @@ in sources."sntp-2.1.0" (sources."socket.io-2.0.4" // { dependencies = [ - sources."accepts-1.3.3" sources."component-emitter-1.2.1" sources."isarray-2.0.1" ]; }) sources."socket.io-adapter-1.1.1" sources."socket.io-client-2.0.4" - sources."socket.io-parser-3.1.2" - sources."spdx-correct-1.0.2" - sources."spdx-expression-parse-1.0.4" - sources."spdx-license-ids-1.2.2" + (sources."socket.io-parser-3.1.3" // { + dependencies = [ + sources."debug-3.1.0" + ]; + }) + sources."spdx-correct-3.0.0" + sources."spdx-exceptions-2.1.0" + sources."spdx-expression-parse-3.0.0" + sources."spdx-license-ids-3.0.0" sources."sshpk-1.13.1" sources."ssri-4.1.6" sources."stack-trace-0.0.9" @@ -40935,16 +41530,16 @@ in sources."strip-json-comments-2.0.1" (sources."superagent-3.8.2" // { dependencies = [ - sources."combined-stream-1.0.5" + sources."combined-stream-1.0.6" sources."component-emitter-1.2.1" sources."cookiejar-2.1.1" sources."debug-3.1.0" sources."delayed-stream-1.0.0" sources."extend-3.0.1" - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."formidable-1.1.1" sources."isarray-1.0.0" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."string_decoder-1.0.3" ]; }) @@ -40955,11 +41550,11 @@ in }) sources."timed-out-4.0.1" sources."to-array-0.1.4" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" - sources."type-is-1.6.15" - sources."typechecker-4.4.1" + sources."type-is-1.6.16" + sources."typechecker-4.5.0" sources."typedarray-0.0.6" sources."uid-safe-2.1.5" sources."ultron-1.1.1" @@ -40968,8 +41563,8 @@ in sources."util-deprecate-1.0.2" sources."utils-merge-1.0.1" sources."uuid-3.2.1" - sources."uws-0.14.5" - sources."validate-npm-package-license-3.0.1" + sources."uws-9.14.0" + sources."validate-npm-package-license-3.0.3" sources."validate-npm-package-name-3.0.0" sources."vary-1.1.2" sources."verror-1.10.0" @@ -41034,11 +41629,11 @@ in sources."bcrypt-pbkdf-1.0.1" sources."bl-1.0.3" sources."boom-2.10.1" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."caseless-0.11.0" sources."chalk-1.1.3" - sources."combined-stream-1.0.5" - sources."commander-2.13.0" + sources."combined-stream-1.0.6" + sources."commander-2.14.1" sources."concat-map-0.0.1" sources."concat-stream-1.5.0" (sources."config-chain-1.1.11" // { @@ -41076,7 +41671,8 @@ in sources."inflight-1.0.6" sources."inherits-2.0.3" sources."ini-1.1.0" - sources."is-my-json-valid-2.17.1" + sources."is-my-ip-valid-1.0.0" + sources."is-my-json-valid-2.17.2" sources."is-property-1.0.2" sources."is-stream-1.1.0" sources."is-typedarray-1.0.0" @@ -41095,9 +41691,9 @@ in }) sources."kew-0.1.7" sources."klaw-1.3.1" - sources."lodash-4.17.4" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."lodash-4.17.5" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mkdirp-0.3.5" @@ -41163,39 +41759,50 @@ in webpack = nodeEnv.buildNodePackage { name = "webpack"; packageName = "webpack"; - version = "3.10.0"; + version = "4.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/webpack/-/webpack-3.10.0.tgz"; - sha512 = "0n3rl5qq259csi0x5qh12wzyaypfds5wy0zrzky19wqsa0mjibrn19fdfgbabply2l576vlj8j69nzkb23jqfy6a36xb3cwi1g4l73z"; + url = "https://registry.npmjs.org/webpack/-/webpack-4.0.1.tgz"; + sha512 = "1hb2dyvj718ijrx00xnd3zbzqll3jqnij5rp5qp4pxx3vl9wxg7jsz8s703h3snxr73yi9a2xpfgwqxs8gcbhl277g5l4lgc8r0sx4c"; }; dependencies = [ - sources."acorn-5.3.0" - (sources."acorn-dynamic-import-2.0.2" // { - dependencies = [ - sources."acorn-4.0.13" - ]; - }) - sources."ajv-5.5.2" - sources."ajv-keywords-2.1.1" - sources."align-text-0.1.4" - sources."ansi-regex-2.1.1" + sources."acorn-5.5.0" + sources."acorn-dynamic-import-3.0.0" + sources."ajv-6.2.0" + sources."ajv-keywords-3.1.0" sources."anymatch-1.3.2" - sources."arr-diff-2.0.0" + sources."aproba-1.2.0" + sources."arr-diff-4.0.0" sources."arr-flatten-1.1.0" - sources."array-unique-0.2.1" - sources."asn1.js-4.9.2" + sources."arr-union-3.1.0" + sources."array-unique-0.3.2" + sources."asn1.js-4.10.1" sources."assert-1.4.1" + sources."assign-symbols-1.0.0" sources."async-2.6.0" sources."async-each-1.0.1" + sources."atob-2.0.3" sources."balanced-match-1.0.0" - sources."base64-js-1.2.1" + (sources."base-0.11.2" // { + dependencies = [ + (sources."define-property-1.0.0" // { + dependencies = [ + sources."kind-of-6.0.2" + ]; + }) + sources."is-extendable-1.0.1" + sources."kind-of-3.2.2" + ]; + }) + sources."base64-js-1.2.3" sources."big.js-3.2.0" sources."binary-extensions-1.11.0" + sources."bluebird-3.5.1" sources."bn.js-4.11.8" - sources."brace-expansion-1.1.8" - (sources."braces-1.8.5" // { + sources."brace-expansion-1.1.11" + (sources."braces-2.3.1" // { dependencies = [ - sources."kind-of-4.0.0" + sources."define-property-1.0.0" + sources."extend-shallow-2.0.1" ]; }) sources."brorand-1.1.0" @@ -41207,152 +41814,202 @@ in sources."browserify-zlib-0.2.0" sources."buffer-4.9.1" sources."buffer-xor-1.0.3" - sources."builtin-modules-1.1.1" sources."builtin-status-codes-3.0.0" - sources."camelcase-1.2.1" - sources."center-align-0.1.3" + sources."cacache-10.0.4" + sources."cache-base-1.0.1" sources."chokidar-1.7.0" + sources."chownr-1.0.1" + sources."chrome-trace-event-0.1.2" sources."cipher-base-1.0.4" - sources."cliui-2.1.0" - sources."co-4.6.0" - sources."code-point-at-1.1.0" + (sources."class-utils-0.3.6" // { + dependencies = [ + sources."define-property-0.2.5" + ]; + }) + sources."collection-visit-1.0.0" + sources."commander-2.14.1" + sources."commondir-1.0.1" + sources."component-emitter-1.2.1" sources."concat-map-0.0.1" + sources."concat-stream-1.6.0" sources."console-browserify-1.1.0" sources."constants-browserify-1.0.0" + sources."copy-concurrently-1.0.5" + sources."copy-descriptor-0.1.1" sources."core-util-is-1.0.2" sources."create-ecdh-4.0.0" sources."create-hash-1.1.3" sources."create-hmac-1.1.6" - sources."cross-spawn-5.1.0" sources."crypto-browserify-3.12.0" - sources."d-1.0.0" + sources."cyclist-0.2.2" sources."date-now-0.1.4" - sources."decamelize-1.2.0" + sources."debug-2.6.9" + sources."decode-uri-component-0.2.0" + sources."define-property-2.0.2" sources."des.js-1.0.0" sources."diffie-hellman-5.0.2" sources."domain-browser-1.2.0" + sources."duplexify-3.5.3" sources."elliptic-6.4.0" sources."emojis-list-2.1.0" - sources."enhanced-resolve-3.4.1" - sources."errno-0.1.6" - sources."error-ex-1.3.1" - sources."es5-ext-0.10.38" - sources."es6-iterator-2.0.3" - sources."es6-map-0.1.5" - sources."es6-set-0.1.5" - sources."es6-symbol-3.1.1" - sources."es6-weak-map-2.0.2" - sources."escope-3.6.0" - sources."esrecurse-4.2.0" + sources."end-of-stream-1.4.1" + sources."enhanced-resolve-4.0.0" + sources."errno-0.1.7" + sources."eslint-scope-3.7.1" + sources."esrecurse-4.2.1" sources."estraverse-4.2.0" - sources."event-emitter-0.3.5" sources."events-1.1.1" sources."evp_bytestokey-1.0.3" - sources."execa-0.7.0" - sources."expand-brackets-0.1.5" + (sources."expand-brackets-2.1.4" // { + dependencies = [ + sources."define-property-0.2.5" + ]; + }) sources."expand-range-1.8.2" - sources."extglob-0.3.2" - sources."fast-deep-equal-1.0.0" + sources."extend-shallow-3.0.2" + (sources."extglob-2.0.4" // { + dependencies = [ + sources."define-property-1.0.0" + sources."extend-shallow-2.0.1" + sources."is-extendable-0.1.1" + sources."kind-of-5.1.0" + ]; + }) + sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."filename-regex-2.0.1" - sources."fill-range-2.2.3" + (sources."fill-range-4.0.0" // { + dependencies = [ + sources."kind-of-3.2.2" + ]; + }) + sources."find-cache-dir-1.0.0" sources."find-up-2.1.0" + sources."flush-write-stream-1.0.2" sources."for-in-1.0.2" sources."for-own-0.1.5" + sources."fragment-cache-0.2.1" + sources."from2-2.3.0" + sources."fs-write-stream-atomic-1.0.10" + sources."fs.realpath-1.0.0" sources."fsevents-1.1.3" - sources."get-caller-file-1.0.2" - sources."get-stream-3.0.0" + sources."get-value-2.0.6" + sources."glob-7.1.2" sources."glob-base-0.3.0" sources."glob-parent-2.0.0" sources."graceful-fs-4.1.11" - sources."has-flag-2.0.0" + sources."has-value-1.0.0" + sources."has-values-1.0.0" sources."hash-base-3.0.4" sources."hash.js-1.1.3" sources."hmac-drbg-1.0.1" - sources."hosted-git-info-2.5.0" sources."https-browserify-1.0.0" sources."ieee754-1.1.8" + sources."iferr-0.1.5" + sources."imurmurhash-0.1.4" sources."indexof-0.0.1" + sources."inflight-1.0.6" sources."inherits-2.0.3" - sources."interpret-1.1.0" - sources."invert-kv-1.0.0" - sources."is-arrayish-0.2.1" + sources."is-accessor-descriptor-1.0.0" sources."is-binary-path-1.0.1" sources."is-buffer-1.1.6" - sources."is-builtin-module-1.0.0" + sources."is-data-descriptor-1.0.0" + sources."is-descriptor-1.0.2" sources."is-dotfile-1.0.3" sources."is-equal-shallow-0.1.3" sources."is-extendable-0.1.1" sources."is-extglob-1.0.0" - sources."is-fullwidth-code-point-1.0.0" sources."is-glob-2.0.1" - sources."is-number-2.1.0" + sources."is-number-3.0.0" + sources."is-odd-2.0.0" + sources."is-plain-object-2.0.4" sources."is-posix-bracket-0.1.1" sources."is-primitive-2.0.0" - sources."is-stream-1.1.0" + sources."is-windows-1.0.2" sources."isarray-1.0.0" - sources."isexe-2.0.0" - sources."isobject-2.1.0" - sources."json-loader-0.5.7" + sources."isobject-3.0.1" sources."json-schema-traverse-0.3.1" sources."json5-0.5.1" - sources."kind-of-3.2.2" - sources."lazy-cache-1.0.4" - sources."lcid-1.0.0" - sources."load-json-file-2.0.0" + sources."kind-of-6.0.2" + sources."lazy-cache-2.0.2" sources."loader-runner-2.3.0" sources."loader-utils-1.1.0" sources."locate-path-2.0.0" - sources."lodash-4.17.4" - sources."longest-1.0.1" + sources."lodash-4.17.5" sources."lru-cache-4.1.1" + sources."make-dir-1.2.0" + sources."map-cache-0.2.2" + sources."map-visit-1.0.0" sources."md5.js-1.3.4" - sources."mem-1.1.0" sources."memory-fs-0.4.1" - sources."micromatch-2.3.11" + (sources."micromatch-3.1.9" // { + dependencies = [ + sources."has-values-0.1.4" + (sources."is-accessor-descriptor-0.1.6" // { + dependencies = [ + sources."kind-of-3.2.2" + ]; + }) + (sources."is-data-descriptor-0.1.4" // { + dependencies = [ + sources."kind-of-3.2.2" + ]; + }) + sources."is-descriptor-0.1.6" + sources."is-extendable-1.0.1" + sources."is-number-4.0.0" + ]; + }) sources."miller-rabin-4.0.1" - sources."mimic-fn-1.1.0" sources."minimalistic-assert-1.0.0" sources."minimalistic-crypto-utils-1.0.1" sources."minimatch-3.0.4" sources."minimist-0.0.8" + sources."mississippi-2.0.0" + sources."mixin-deep-1.3.1" sources."mkdirp-0.5.1" - sources."nan-2.8.0" + sources."move-concurrently-1.0.1" + sources."ms-2.0.0" + sources."nan-2.9.2" + sources."nanomatch-1.2.9" + sources."neo-async-2.5.0" (sources."node-libs-browser-2.1.0" // { dependencies = [ sources."hash-base-2.0.2" sources."inherits-2.0.1" ]; }) - sources."normalize-package-data-2.4.0" sources."normalize-path-2.1.1" - sources."npm-run-path-2.0.2" - sources."number-is-nan-1.0.1" - sources."object-assign-4.1.1" + sources."object-copy-0.1.0" + sources."object-visit-1.0.1" sources."object.omit-2.0.1" + sources."object.pick-1.3.0" + sources."once-1.4.0" sources."os-browserify-0.3.0" - sources."os-locale-2.1.0" - sources."p-finally-1.0.0" sources."p-limit-1.2.0" sources."p-locate-2.0.0" sources."p-try-1.0.0" sources."pako-1.0.6" + sources."parallel-transform-1.1.0" sources."parse-asn1-5.1.0" sources."parse-glob-3.0.4" - sources."parse-json-2.2.0" + sources."pascalcase-0.1.1" sources."path-browserify-0.0.0" sources."path-exists-3.0.0" sources."path-is-absolute-1.0.1" - sources."path-key-2.0.1" - sources."path-type-2.0.0" sources."pbkdf2-3.0.14" - sources."pify-2.3.0" + sources."pify-3.0.0" + sources."pkg-dir-2.0.0" + sources."posix-character-classes-0.1.1" sources."preserve-0.2.0" sources."process-0.11.10" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" + sources."promise-inflight-1.0.1" sources."prr-1.0.1" sources."pseudomap-1.0.2" sources."public-encrypt-4.0.0" + sources."pump-2.0.1" + sources."pumpify-1.4.0" sources."punycode-1.4.1" sources."querystring-0.2.0" sources."querystring-es3-0.2.1" @@ -41366,89 +42023,150 @@ in ]; }) sources."randombytes-2.0.6" - sources."randomfill-1.0.3" - sources."read-pkg-2.0.0" - sources."read-pkg-up-2.0.0" - sources."readable-stream-2.3.3" + sources."randomfill-1.0.4" + sources."readable-stream-2.3.4" sources."readdirp-2.1.0" sources."regex-cache-0.4.4" + sources."regex-not-1.0.2" sources."remove-trailing-separator-1.1.0" sources."repeat-element-1.1.2" sources."repeat-string-1.6.1" - sources."require-directory-2.1.1" - sources."require-main-filename-1.0.1" - sources."right-align-0.1.3" + sources."resolve-url-0.2.1" + sources."ret-0.1.15" + sources."rimraf-2.6.2" sources."ripemd160-2.0.1" + sources."run-queue-1.0.3" sources."safe-buffer-5.1.1" - sources."semver-5.5.0" - sources."set-blocking-2.0.0" + sources."safe-regex-1.1.0" + sources."schema-utils-0.4.5" + sources."serialize-javascript-1.4.0" + sources."set-getter-0.1.0" sources."set-immediate-shim-1.0.1" + sources."set-value-2.0.0" sources."setimmediate-1.0.5" sources."sha.js-2.4.10" - sources."shebang-command-1.2.0" - sources."shebang-regex-1.0.0" - sources."signal-exit-3.0.2" - sources."source-list-map-2.0.0" - sources."source-map-0.5.7" - sources."spdx-correct-1.0.2" - sources."spdx-expression-parse-1.0.4" - sources."spdx-license-ids-1.2.2" - sources."stream-browserify-2.0.1" - sources."stream-http-2.8.0" - sources."string-width-2.1.1" - sources."string_decoder-1.0.3" - sources."strip-ansi-3.0.1" - sources."strip-bom-3.0.0" - sources."strip-eof-1.0.0" - sources."supports-color-4.5.0" - sources."tapable-0.2.8" - sources."timers-browserify-2.0.6" - sources."to-arraybuffer-1.0.1" - sources."tty-browserify-0.0.0" - sources."uglify-js-2.8.29" - sources."uglify-to-browserify-1.0.2" - (sources."uglifyjs-webpack-plugin-0.4.6" // { + (sources."snapdragon-0.8.1" // { dependencies = [ - sources."yargs-3.10.0" + (sources."define-property-0.2.5" // { + dependencies = [ + (sources."is-accessor-descriptor-0.1.6" // { + dependencies = [ + sources."kind-of-3.2.2" + ]; + }) + (sources."is-data-descriptor-0.1.4" // { + dependencies = [ + sources."kind-of-3.2.2" + ]; + }) + sources."is-descriptor-0.1.6" + sources."kind-of-5.1.0" + ]; + }) + sources."extend-shallow-2.0.1" + sources."is-accessor-descriptor-1.0.0" + sources."is-data-descriptor-1.0.0" + sources."is-descriptor-1.0.2" + sources."is-extendable-0.1.1" + (sources."is-number-3.0.0" // { + dependencies = [ + sources."kind-of-3.2.2" + ]; + }) + sources."kind-of-4.0.0" ]; }) + (sources."snapdragon-node-2.1.1" // { + dependencies = [ + sources."kind-of-3.2.2" + ]; + }) + sources."snapdragon-util-3.0.1" + sources."source-list-map-2.0.0" + sources."source-map-0.5.7" + sources."source-map-resolve-0.5.1" + sources."source-map-url-0.4.0" + (sources."split-string-3.1.0" // { + dependencies = [ + sources."extend-shallow-3.0.2" + ]; + }) + sources."ssri-5.2.4" + sources."static-extend-0.1.2" + sources."stream-browserify-2.0.1" + sources."stream-each-1.2.2" + sources."stream-http-2.8.0" + sources."stream-shift-1.0.0" + sources."string_decoder-1.0.3" + sources."tapable-1.0.0" + sources."through2-2.0.3" + sources."timers-browserify-2.0.6" + sources."to-arraybuffer-1.0.1" + sources."to-object-path-0.3.0" + sources."to-regex-3.0.2" + sources."to-regex-range-2.1.1" + sources."tty-browserify-0.0.0" + sources."typedarray-0.0.6" + sources."uglify-es-3.3.10" + (sources."uglifyjs-webpack-plugin-1.2.2" // { + dependencies = [ + sources."source-map-0.6.1" + ]; + }) + (sources."union-value-1.0.0" // { + dependencies = [ + sources."set-value-0.4.3" + ]; + }) + sources."unique-filename-1.1.0" + sources."unique-slug-2.0.0" + (sources."unset-value-1.0.0" // { + dependencies = [ + (sources."has-value-0.3.1" // { + dependencies = [ + sources."isobject-2.1.0" + ]; + }) + ]; + }) + sources."urix-0.1.0" (sources."url-0.11.0" // { dependencies = [ sources."punycode-1.3.2" ]; }) + sources."use-2.0.2" sources."util-0.10.3" sources."util-deprecate-1.0.2" - sources."validate-npm-package-license-3.0.1" sources."vm-browserify-0.0.4" - sources."watchpack-1.4.0" + (sources."watchpack-1.4.0" // { + dependencies = [ + sources."arr-diff-2.0.0" + sources."array-unique-0.2.1" + (sources."braces-1.8.5" // { + dependencies = [ + sources."kind-of-4.0.0" + ]; + }) + sources."expand-brackets-0.1.5" + sources."extglob-0.3.2" + sources."fill-range-2.2.3" + sources."is-number-2.1.0" + sources."isobject-2.1.0" + sources."kind-of-3.2.2" + sources."micromatch-2.3.11" + ]; + }) (sources."webpack-sources-1.1.0" // { dependencies = [ sources."source-map-0.6.1" ]; }) - sources."which-1.3.0" - sources."which-module-2.0.0" - sources."window-size-0.1.0" - sources."wordwrap-0.0.2" - sources."wrap-ansi-2.1.0" + sources."worker-farm-1.5.4" + sources."wrappy-1.0.2" sources."xtend-4.0.1" - sources."y18n-3.2.1" + sources."y18n-4.0.0" sources."yallist-2.1.2" - (sources."yargs-8.0.2" // { - dependencies = [ - sources."ansi-regex-3.0.0" - sources."camelcase-4.1.0" - (sources."cliui-3.2.0" // { - dependencies = [ - sources."string-width-1.0.2" - ]; - }) - sources."is-fullwidth-code-point-2.0.0" - sources."strip-ansi-4.0.0" - ]; - }) - sources."yargs-parser-7.0.0" ]; buildInputs = globalBuildInputs; meta = { @@ -41462,15 +42180,20 @@ in web-ext = nodeEnv.buildNodePackage { name = "web-ext"; packageName = "web-ext"; - version = "2.3.2"; + version = "2.4.0"; src = fetchurl { - url = "https://registry.npmjs.org/web-ext/-/web-ext-2.3.2.tgz"; - sha1 = "45c7cb50cbea90d6127a3c4bb128802a67f67c93"; + url = "https://registry.npmjs.org/web-ext/-/web-ext-2.4.0.tgz"; + sha1 = "4103e737196eb2a9fe83087752357d1dfe618294"; }; dependencies = [ - sources."@types/node-9.3.0" + sources."@types/node-9.4.6" sources."JSONSelect-0.2.1" - sources."acorn-5.3.0" + sources."acorn-5.5.0" + (sources."acorn-dynamic-import-2.0.2" // { + dependencies = [ + sources."acorn-4.0.13" + ]; + }) (sources."acorn-jsx-3.0.1" // { dependencies = [ sources."acorn-3.3.0" @@ -41479,23 +42202,32 @@ in sources."adbkit-2.11.0" sources."adbkit-logcat-1.1.0" sources."adbkit-monkey-1.0.1" - (sources."addons-linter-0.33.0" // { + (sources."addons-linter-0.35.0" // { dependencies = [ sources."ajv-keywords-1.5.1" sources."ansi-escapes-1.4.0" sources."ansi-regex-3.0.0" sources."ansi-styles-3.2.0" sources."async-2.6.0" + sources."camelcase-1.2.1" sources."cli-cursor-1.0.2" + (sources."cliui-3.2.0" // { + dependencies = [ + sources."string-width-1.0.2" + ]; + }) sources."debug-3.1.0" sources."decamelize-1.2.0" sources."domelementtype-1.1.3" sources."figures-1.7.0" - sources."globals-11.2.0" + sources."globals-11.3.0" + sources."hash-base-2.0.2" + sources."inherits-2.0.1" sources."inquirer-0.12.0" sources."is-fullwidth-code-point-1.0.0" sources."mute-stream-0.0.5" sources."onetime-1.1.0" + sources."parse-json-2.2.0" sources."pluralize-1.2.1" sources."progress-1.1.8" sources."punycode-2.1.0" @@ -41510,24 +42242,22 @@ in sources."supports-color-4.5.0" sources."table-3.8.3" sources."underscore-1.6.0" + sources."wordwrap-0.0.2" (sources."yargs-10.0.3" // { dependencies = [ - sources."ansi-regex-2.1.1" + sources."camelcase-4.1.0" sources."is-fullwidth-code-point-2.0.0" - (sources."string-width-2.1.1" // { - dependencies = [ - sources."ansi-regex-3.0.0" - sources."strip-ansi-4.0.0" - ]; - }) - sources."strip-ansi-3.0.1" + sources."string-width-2.1.1" ]; }) + sources."yargs-parser-8.1.0" ]; }) sources."adm-zip-0.4.7" sources."ajv-5.5.2" - sources."ajv-keywords-2.1.1" + sources."ajv-keywords-3.1.0" + sources."ajv-merge-patch-3.0.0" + sources."align-text-0.1.4" sources."anchor-markdown-header-0.5.7" sources."ansi-align-2.0.0" sources."ansi-escapes-3.0.0" @@ -41537,7 +42267,7 @@ in sources."anymatch-1.3.2" sources."archiver-2.1.1" sources."archiver-utils-1.3.0" - sources."argparse-1.0.9" + sources."argparse-1.0.10" sources."arr-diff-2.0.0" sources."arr-flatten-1.1.0" sources."array-filter-0.0.1" @@ -41549,6 +42279,8 @@ in sources."array-unique-0.2.1" sources."arrify-1.0.1" sources."asn1-0.2.3" + sources."asn1.js-4.10.1" + sources."assert-1.4.1" sources."assert-plus-1.0.0" sources."async-0.2.10" sources."async-each-1.0.1" @@ -41557,7 +42289,7 @@ in sources."aws4-1.6.0" sources."babel-code-frame-6.26.0" sources."babel-core-6.26.0" - sources."babel-generator-6.26.0" + sources."babel-generator-6.26.1" sources."babel-helpers-6.24.1" sources."babel-messages-6.23.0" (sources."babel-polyfill-6.26.0" // { @@ -41578,24 +42310,37 @@ in sources."babylon-6.18.0" sources."bail-1.0.2" sources."balanced-match-1.0.0" + sources."base64-js-1.2.3" sources."base64url-2.0.0" sources."bcrypt-pbkdf-1.0.1" + sources."big.js-3.2.0" sources."binary-extensions-1.11.0" sources."bl-1.2.1" sources."bluebird-2.9.34" + sources."bn.js-4.11.8" sources."boolbase-1.0.0" sources."boom-4.3.1" sources."boundary-1.0.1" sources."boxen-1.3.0" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" (sources."braces-1.8.5" // { dependencies = [ sources."kind-of-4.0.0" ]; }) + sources."brorand-1.1.0" + sources."browserify-aes-1.1.1" + sources."browserify-cipher-1.0.0" + sources."browserify-des-1.0.0" + sources."browserify-rsa-4.0.1" + sources."browserify-sign-4.0.4" + sources."browserify-zlib-0.2.0" + sources."buffer-4.9.1" sources."buffer-crc32-0.2.13" sources."buffer-equal-constant-time-1.0.1" + sources."buffer-xor-1.0.3" sources."builtin-modules-1.1.1" + sources."builtin-status-codes-3.0.0" (sources."bunyan-1.8.12" // { dependencies = [ sources."glob-6.0.4" @@ -41608,6 +42353,7 @@ in sources."capture-stack-trace-1.0.0" sources."caseless-0.12.0" sources."ccount-1.0.2" + sources."center-align-0.1.3" sources."chalk-2.3.0" sources."character-entities-1.2.1" sources."character-entities-html4-1.1.1" @@ -41620,15 +42366,12 @@ in ]; }) sources."chokidar-1.7.0" + sources."cipher-base-1.0.4" sources."circular-json-0.3.3" sources."cli-boxes-1.0.0" sources."cli-cursor-2.1.0" sources."cli-width-2.2.0" - (sources."cliui-3.2.0" // { - dependencies = [ - sources."string-width-1.0.2" - ]; - }) + sources."cliui-2.1.0" sources."clone-1.0.3" sources."co-4.6.0" sources."code-point-at-1.1.0" @@ -41637,19 +42380,24 @@ in sources."color-name-1.1.3" sources."colors-0.5.1" sources."columnify-1.5.4" - sources."combined-stream-1.0.5" - sources."commander-2.13.0" + sources."combined-stream-1.0.6" + sources."commander-2.14.1" sources."common-tags-1.7.2" sources."compress-commons-1.2.2" sources."concat-map-0.0.1" sources."concat-stream-1.6.0" sources."configstore-3.1.1" + sources."console-browserify-1.1.0" + sources."constants-browserify-1.0.0" sources."convert-source-map-1.5.1" sources."core-js-2.5.3" sources."core-util-is-1.0.2" sources."crc-3.5.0" sources."crc32-stream-2.0.0" + sources."create-ecdh-4.0.0" sources."create-error-class-3.0.2" + sources."create-hash-1.1.3" + sources."create-hmac-1.1.6" sources."cross-spawn-5.1.0" sources."crx-parser-0.1.2" (sources."cryptiles-3.1.2" // { @@ -41657,14 +42405,17 @@ in sources."boom-5.2.0" ]; }) + sources."crypto-browserify-3.12.0" sources."crypto-random-string-1.0.0" sources."css-select-1.2.0" sources."css-what-2.1.0" sources."d-1.0.0" sources."dashdash-1.14.1" + sources."date-now-0.1.4" sources."debounce-1.1.0" sources."debug-2.6.9" sources."decamelize-2.0.0" + sources."deep-equal-1.0.1" sources."deep-extend-0.4.2" sources."deep-is-0.1.3" sources."deepcopy-0.6.3" @@ -41672,15 +42423,19 @@ in sources."defaults-1.0.3" sources."del-2.2.2" sources."delayed-stream-1.0.0" + sources."des.js-1.0.0" sources."detect-indent-4.0.0" + sources."diffie-hellman-5.0.2" (sources."dispensary-0.12.0" // { dependencies = [ + sources."semver-5.4.1" sources."source-map-support-0.5.0" ]; }) sources."doctoc-1.3.0" sources."doctrine-2.1.0" sources."dom-serializer-0.1.0" + sources."domain-browser-1.2.0" sources."domelementtype-1.3.0" sources."domhandler-2.4.1" sources."domutils-1.5.1" @@ -41689,12 +42444,16 @@ in sources."duplexer3-0.1.4" sources."ecc-jsbn-0.1.1" sources."ecdsa-sig-formatter-1.0.9" + sources."elliptic-6.4.0" sources."emoji-regex-6.1.3" + sources."emojis-list-2.1.0" sources."encoding-0.1.12" sources."end-of-stream-1.4.1" + sources."enhanced-resolve-3.4.1" sources."entities-1.1.1" + sources."errno-0.1.7" sources."error-ex-1.3.1" - sources."es5-ext-0.10.38" + sources."es5-ext-0.10.39" sources."es6-error-4.1.1" sources."es6-iterator-2.0.3" sources."es6-map-0.1.5" @@ -41733,14 +42492,16 @@ in }) sources."eslint-scope-3.7.1" sources."eslint-visitor-keys-1.0.0" - sources."espree-3.5.2" + sources."espree-3.5.3" sources."esprima-3.1.3" sources."esquery-1.0.0" - sources."esrecurse-4.2.0" + sources."esrecurse-4.2.1" sources."estraverse-4.2.0" sources."esutils-2.0.2" sources."event-emitter-0.3.5" sources."event-to-promise-0.8.0" + sources."events-1.1.1" + sources."evp_bytestokey-1.0.3" sources."execa-0.7.0" sources."exit-hook-1.1.1" sources."expand-brackets-0.1.5" @@ -41748,9 +42509,11 @@ in sources."extend-3.0.1" sources."external-editor-2.1.0" sources."extglob-0.3.2" + sources."extract-text-webpack-plugin-3.0.2" sources."extsprintf-1.3.0" - sources."fast-deep-equal-1.0.0" + sources."fast-deep-equal-1.1.0" sources."fast-json-parse-1.0.3" + sources."fast-json-patch-1.2.2" sources."fast-json-stable-stringify-2.0.0" sources."fast-levenshtein-2.0.6" sources."fast-safe-stringify-1.2.3" @@ -41773,7 +42536,7 @@ in sources."for-in-1.0.2" sources."for-own-0.1.5" sources."forever-agent-0.6.1" - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."fs-extra-4.0.3" sources."fs.realpath-1.0.0" sources."fsevents-1.1.3" @@ -41814,22 +42577,28 @@ in sources."has-ansi-2.0.0" sources."has-color-0.1.7" sources."has-flag-2.0.0" + sources."hash-base-3.0.4" + sources."hash.js-1.1.3" sources."hawk-6.0.2" - sources."hoek-4.2.0" + sources."hmac-drbg-1.0.1" + sources."hoek-4.2.1" sources."home-or-tmp-2.0.0" sources."hosted-git-info-2.5.0" sources."htmlparser2-3.9.2" sources."http-signature-1.2.0" + sources."https-browserify-1.0.0" sources."iconv-lite-0.4.19" + sources."ieee754-1.1.8" sources."ignore-3.3.7" sources."import-lazy-2.1.0" sources."imurmurhash-0.1.4" + sources."indexof-0.0.1" sources."inflight-1.0.6" sources."inherits-2.0.3" sources."ini-1.3.5" sources."inquirer-3.3.0" sources."interpret-1.1.0" - sources."invariant-2.2.2" + sources."invariant-2.2.3" sources."invert-kv-1.0.0" sources."is-absolute-0.1.7" sources."is-alphabetical-1.0.1" @@ -41848,7 +42617,8 @@ in sources."is-glob-2.0.1" sources."is-hexadecimal-1.0.1" sources."is-installed-globally-0.1.0" - sources."is-my-json-valid-2.17.1" + sources."is-my-ip-valid-1.0.0" + sources."is-my-json-valid-2.17.2" sources."is-npm-1.0.0" sources."is-number-2.1.0" sources."is-obj-1.0.1" @@ -41879,6 +42649,8 @@ in sources."js-yaml-3.10.0" sources."jsbn-0.1.1" sources."jsesc-1.3.0" + sources."json-loader-0.5.7" + sources."json-merge-patch-0.2.3" sources."json-parse-better-errors-1.0.1" sources."json-schema-0.2.3" sources."json-schema-traverse-0.3.1" @@ -41896,30 +42668,39 @@ in sources."jws-3.1.4" sources."kind-of-3.2.2" sources."latest-version-3.1.0" + sources."lazy-cache-1.0.4" sources."lazystream-1.0.0" sources."lcid-1.0.0" sources."levn-0.3.0" - sources."load-json-file-1.1.0" + sources."load-json-file-2.0.0" + sources."loader-runner-2.3.0" + sources."loader-utils-1.1.0" sources."locate-path-2.0.0" - sources."lodash-4.17.4" + sources."lodash-4.17.5" sources."lodash.endswith-4.2.1" - sources."lodash.isfunction-3.0.8" + sources."lodash.isfunction-3.0.9" sources."lodash.isstring-4.0.1" sources."lodash.once-4.1.1" sources."lodash.sortby-4.7.0" sources."lodash.startswith-4.2.1" + sources."longest-1.0.1" sources."longest-streak-1.0.0" sources."loose-envify-1.3.1" sources."lowercase-keys-1.0.0" sources."lru-cache-4.1.1" - sources."make-dir-1.1.0" + sources."make-dir-1.2.0" sources."markdown-table-0.4.0" sources."markdown-to-ast-3.4.0" + sources."md5.js-1.3.4" sources."mem-1.1.0" + sources."memory-fs-0.4.1" sources."micromatch-2.3.11" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" - sources."mimic-fn-1.1.0" + sources."miller-rabin-4.0.1" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" + sources."mimic-fn-1.2.0" + sources."minimalistic-assert-1.0.0" + sources."minimalistic-crypto-utils-1.0.1" sources."minimatch-3.0.4" sources."minimist-1.2.0" (sources."mkdirp-0.5.1" // { @@ -41932,7 +42713,7 @@ in sources."mute-stream-0.0.7" sources."mv-2.1.1" sources."mz-2.7.0" - sources."nan-2.8.0" + sources."nan-2.9.2" sources."natural-compare-1.4.0" sources."natural-compare-lite-1.4.0" sources."ncp-2.0.0" @@ -41943,7 +42724,8 @@ in sources."traverse-0.4.6" ]; }) - sources."node-forge-0.7.1" + sources."node-forge-0.7.2" + sources."node-libs-browser-2.1.0" sources."node-notifier-5.2.1" sources."nomnom-1.8.1" sources."normalize-package-data-2.4.0" @@ -41958,6 +42740,7 @@ in sources."onetime-2.0.1" sources."open-0.0.5" sources."optionator-0.8.2" + sources."os-browserify-0.3.0" sources."os-homedir-1.0.2" sources."os-locale-2.1.0" sources."os-shim-0.1.3" @@ -41968,16 +42751,19 @@ in sources."p-try-1.0.0" sources."package-json-4.0.1" sources."pako-1.0.6" + sources."parse-asn1-5.1.0" sources."parse-entities-1.1.1" sources."parse-glob-3.0.4" sources."parse-json-4.0.0" sources."parse5-3.0.3" + sources."path-browserify-0.0.0" sources."path-exists-3.0.0" sources."path-is-absolute-1.0.1" sources."path-is-inside-1.0.2" sources."path-key-2.0.1" sources."path-parse-1.0.5" - sources."path-type-1.1.0" + sources."path-type-2.0.0" + sources."pbkdf2-3.0.14" sources."pend-1.2.0" sources."performance-now-2.1.0" sources."pify-2.3.0" @@ -42002,12 +42788,17 @@ in sources."debug-2.6.9" ]; }) - sources."process-nextick-args-1.0.7" + sources."process-0.11.10" + sources."process-nextick-args-2.0.0" sources."progress-2.0.0" + sources."prr-1.0.1" sources."pseudomap-1.0.2" + sources."public-encrypt-4.0.0" sources."pump-2.0.1" sources."punycode-1.4.1" sources."qs-6.5.1" + sources."querystring-0.2.0" + sources."querystring-es3-0.2.1" sources."quick-format-unescaped-1.1.2" (sources."randomatic-1.1.7" // { dependencies = [ @@ -42018,16 +42809,18 @@ in }) ]; }) - sources."rc-1.2.4" - sources."read-pkg-1.1.0" - sources."read-pkg-up-1.0.1" - sources."readable-stream-2.3.3" + sources."randombytes-2.0.6" + sources."randomfill-1.0.4" + sources."rc-1.2.5" + sources."read-pkg-2.0.0" + sources."read-pkg-up-2.0.0" + sources."readable-stream-2.3.4" sources."readdirp-2.1.0" sources."readline2-1.0.1" sources."rechoir-0.6.2" sources."regenerator-runtime-0.11.1" sources."regex-cache-0.4.4" - sources."registry-auth-token-3.3.1" + sources."registry-auth-token-3.3.2" sources."registry-url-3.1.0" (sources."relaxed-json-1.0.1" // { dependencies = [ @@ -42052,22 +42845,26 @@ in sources."resolve-1.5.0" sources."resolve-from-1.0.1" sources."restore-cursor-2.0.0" + sources."right-align-0.1.3" sources."rimraf-2.6.2" + sources."ripemd160-2.0.1" sources."run-async-2.3.0" sources."rx-lite-4.0.8" sources."rx-lite-aggregates-4.0.8" sources."safe-buffer-5.1.1" - sources."safe-json-stringify-1.0.4" + sources."safe-json-stringify-1.1.0" sources."sax-1.2.4" - sources."semver-5.4.1" + sources."schema-utils-0.3.0" + sources."semver-5.5.0" sources."semver-diff-2.1.0" sources."set-blocking-2.0.0" sources."set-immediate-shim-1.0.1" + sources."setimmediate-1.0.5" sources."sha.js-2.4.10" sources."shebang-command-1.2.0" sources."shebang-regex-1.0.0" sources."shell-quote-1.6.1" - sources."shelljs-0.8.0" + sources."shelljs-0.8.1" sources."shellwords-0.1.1" (sources."sign-addon-0.2.2" // { dependencies = [ @@ -42098,20 +42895,24 @@ in sources."slash-1.0.0" sources."slice-ansi-1.0.0" sources."sntp-2.1.0" + sources."source-list-map-2.0.0" sources."source-map-0.5.7" - (sources."source-map-support-0.5.2" // { + (sources."source-map-support-0.5.3" // { dependencies = [ sources."source-map-0.6.1" ]; }) sources."spawn-sync-1.0.15" - sources."spdx-correct-1.0.2" - sources."spdx-expression-parse-1.0.4" - sources."spdx-license-ids-1.2.2" + sources."spdx-correct-3.0.0" + sources."spdx-exceptions-2.1.0" + sources."spdx-expression-parse-3.0.0" + sources."spdx-license-ids-3.0.0" sources."split-0.3.3" sources."split2-2.2.0" sources."sprintf-js-1.0.3" sources."sshpk-1.13.1" + sources."stream-browserify-2.0.1" + sources."stream-http-2.8.0" sources."stream-parser-0.3.1" sources."stream-to-array-2.3.0" (sources."stream-to-promise-2.2.0" // { @@ -42132,7 +42933,12 @@ in sources."strip-json-comments-2.0.1" sources."structured-source-3.0.2" sources."supports-color-2.0.0" - sources."table-4.0.2" + (sources."table-4.0.3" // { + dependencies = [ + sources."ajv-6.2.0" + ]; + }) + sources."tapable-0.2.8" sources."tar-stream-1.5.5" sources."term-size-1.2.0" sources."text-table-0.2.0" @@ -42141,21 +42947,31 @@ in sources."through-2.3.8" sources."through2-2.0.3" sources."timed-out-4.0.1" + sources."timers-browserify-2.0.6" sources."tmp-0.0.33" + sources."to-arraybuffer-1.0.1" sources."to-fast-properties-1.0.3" sources."topo-1.1.0" sources."tosource-1.0.0" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."tr46-1.0.1" sources."traverse-0.6.6" sources."trim-0.0.1" sources."trim-right-1.0.1" sources."trim-trailing-lines-1.1.0" sources."trough-1.0.1" + sources."tty-browserify-0.0.0" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" sources."type-check-0.3.2" sources."typedarray-0.0.6" + sources."uglify-js-2.8.29" + sources."uglify-to-browserify-1.0.2" + (sources."uglifyjs-webpack-plugin-0.4.6" // { + dependencies = [ + sources."yargs-3.10.0" + ]; + }) sources."underscore-1.8.3" sources."unherit-1.1.0" sources."unified-4.2.1" @@ -42172,14 +42988,21 @@ in ]; }) sources."update-section-0.3.3" + (sources."url-0.11.0" // { + dependencies = [ + sources."punycode-1.3.2" + ]; + }) sources."url-parse-lax-1.0.0" sources."user-home-2.0.0" + sources."util-0.10.3" sources."util-deprecate-1.0.2" sources."uuid-3.2.1" - sources."validate-npm-package-license-3.0.1" + sources."validate-npm-package-license-3.0.3" sources."verror-1.10.0" sources."vfile-1.4.0" sources."vfile-location-2.0.2" + sources."vm-browserify-0.0.4" (sources."watchpack-1.4.0" // { dependencies = [ sources."async-2.6.0" @@ -42187,11 +43010,30 @@ in }) sources."wcwidth-1.0.1" sources."webidl-conversions-4.0.2" + (sources."webpack-3.10.0" // { + dependencies = [ + sources."ajv-keywords-2.1.1" + sources."ansi-regex-2.1.1" + sources."camelcase-4.1.0" + sources."is-fullwidth-code-point-2.0.0" + sources."source-map-0.5.7" + sources."string-width-2.1.1" + sources."strip-ansi-3.0.1" + (sources."yargs-8.0.2" // { + dependencies = [ + sources."ansi-regex-3.0.0" + sources."strip-ansi-4.0.0" + ]; + }) + ]; + }) + sources."webpack-sources-1.1.0" sources."whatwg-url-6.3.0" sources."when-3.7.7" sources."which-1.3.0" sources."which-module-2.0.0" sources."widest-line-2.0.0" + sources."window-size-0.1.0" sources."winreg-0.0.12" sources."wordwrap-1.0.0" sources."wrap-ansi-2.1.0" @@ -42200,7 +43042,7 @@ in sources."write-file-atomic-2.3.0" sources."xdg-basedir-3.0.0" sources."xml2js-0.4.19" - sources."xmlbuilder-9.0.4" + sources."xmlbuilder-9.0.7" sources."xmldom-0.1.27" sources."xregexp-4.0.0" sources."xtend-4.0.1" @@ -42209,19 +43051,24 @@ in (sources."yargs-6.6.0" // { dependencies = [ sources."camelcase-3.0.0" + sources."cliui-3.2.0" sources."decamelize-1.2.0" sources."find-up-1.1.2" sources."is-fullwidth-code-point-1.0.0" + sources."load-json-file-1.1.0" sources."os-locale-1.4.0" sources."parse-json-2.2.0" sources."path-exists-2.1.0" + sources."path-type-1.1.0" + sources."read-pkg-1.1.0" + sources."read-pkg-up-1.0.1" sources."string-width-1.0.2" sources."strip-bom-2.0.0" sources."which-module-1.0.0" sources."yargs-parser-4.2.1" ]; }) - sources."yargs-parser-8.1.0" + sources."yargs-parser-7.0.0" sources."yauzl-2.9.1" (sources."zip-dir-1.0.2" // { dependencies = [ @@ -42259,10 +43106,10 @@ in yarn = nodeEnv.buildNodePackage { name = "yarn"; packageName = "yarn"; - version = "1.3.2"; + version = "1.5.1"; src = fetchurl { - url = "https://registry.npmjs.org/yarn/-/yarn-1.3.2.tgz"; - sha1 = "5939762581b5b4ddcd3418c0f6be42df3aee195f"; + url = "https://registry.npmjs.org/yarn/-/yarn-1.5.1.tgz"; + sha1 = "e8680360e832ac89521eb80dad3a7bc27a40bab4"; }; buildInputs = globalBuildInputs; meta = { @@ -42311,7 +43158,7 @@ in }) sources."boom-4.3.1" sources."boxen-1.3.0" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."builtin-modules-1.1.1" sources."cacheable-request-2.1.4" sources."camelcase-2.1.1" @@ -42333,7 +43180,7 @@ in sources."code-point-at-1.1.0" sources."color-convert-1.9.1" sources."color-name-1.1.3" - sources."combined-stream-1.0.5" + sources."combined-stream-1.0.6" sources."concat-map-0.0.1" sources."concat-stream-1.6.0" sources."configstore-3.1.1" @@ -42371,7 +43218,7 @@ in sources."extend-3.0.1" sources."external-editor-2.1.0" sources."extsprintf-1.3.0" - sources."fast-deep-equal-1.0.0" + sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."figures-2.0.0" sources."filter-obj-1.1.0" @@ -42380,7 +43227,7 @@ in sources."first-chunk-stream-2.0.0" sources."foreachasync-3.0.0" sources."forever-agent-0.6.1" - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."from2-2.3.0" sources."fs.realpath-1.0.0" (sources."fullname-3.3.0" // { @@ -42397,18 +43244,18 @@ in sources."glob-7.1.2" sources."global-dirs-0.1.1" sources."globby-6.1.0" - sources."got-8.0.3" + sources."got-8.2.0" sources."graceful-fs-4.1.11" sources."grouped-queue-0.3.3" sources."har-schema-2.0.0" sources."har-validator-5.0.3" sources."has-ansi-2.0.0" - sources."has-flag-2.0.0" - sources."has-symbol-support-x-1.4.1" + sources."has-flag-3.0.0" + sources."has-symbol-support-x-1.4.2" sources."has-to-string-tag-x-1.4.1" sources."has-unicode-2.0.1" sources."hawk-6.0.2" - sources."hoek-4.2.0" + sources."hoek-4.2.1" sources."hosted-git-info-2.5.0" sources."http-cache-semantics-3.8.1" sources."http-signature-1.2.0" @@ -42424,9 +43271,9 @@ in dependencies = [ sources."ansi-regex-3.0.0" sources."ansi-styles-3.2.0" - sources."chalk-2.3.0" + sources."chalk-2.3.1" sources."strip-ansi-4.0.0" - sources."supports-color-4.5.0" + sources."supports-color-5.2.0" ]; }) (sources."insight-0.8.4" // { @@ -42490,7 +43337,7 @@ in sources."latest-version-3.1.0" sources."load-json-file-1.1.0" sources."locate-path-2.0.0" - sources."lodash-4.17.4" + sources."lodash-4.17.5" sources."lodash._getnative-3.9.1" sources."lodash.debounce-3.1.1" sources."lodash.pad-4.5.1" @@ -42500,7 +43347,7 @@ in sources."loud-rejection-1.6.0" sources."lowercase-keys-1.0.0" sources."lru-cache-4.1.1" - sources."make-dir-1.1.0" + sources."make-dir-1.2.0" sources."map-obj-1.0.1" sources."mem-1.1.0" sources."mem-fs-1.1.3" @@ -42511,9 +43358,9 @@ in sources."read-pkg-up-1.0.1" ]; }) - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" - sources."mimic-fn-1.1.0" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" + sources."mimic-fn-1.2.0" sources."mimic-response-1.0.0" sources."minimatch-3.0.4" sources."minimist-1.2.0" @@ -42547,7 +43394,7 @@ in }) sources."os-shim-0.1.3" sources."os-tmpdir-1.0.2" - sources."osenv-0.1.4" + sources."osenv-0.1.5" sources."osx-release-1.1.0" sources."p-any-1.1.0" sources."p-cancelable-0.3.0" @@ -42583,12 +43430,12 @@ in sources."pinkie-2.0.4" sources."pinkie-promise-2.0.1" sources."prepend-http-2.0.0" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."pseudomap-1.0.2" sources."punycode-1.4.1" sources."qs-6.5.1" - sources."query-string-5.0.1" - sources."rc-1.2.4" + sources."query-string-5.1.0" + sources."rc-1.2.5" sources."read-pkg-1.1.0" (sources."read-pkg-up-2.0.0" // { dependencies = [ @@ -42601,10 +43448,10 @@ in sources."strip-bom-3.0.0" ]; }) - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."readline2-1.0.1" sources."redent-1.0.0" - sources."registry-auth-token-3.3.1" + sources."registry-auth-token-3.3.2" sources."registry-url-3.1.0" sources."repeating-2.0.1" sources."replace-ext-0.0.1" @@ -42635,9 +43482,10 @@ in sources."sort-keys-2.0.0" sources."sort-on-2.0.0" sources."spawn-sync-1.0.15" - sources."spdx-correct-1.0.2" - sources."spdx-expression-parse-1.0.4" - sources."spdx-license-ids-1.2.2" + sources."spdx-correct-3.0.0" + sources."spdx-exceptions-2.1.0" + sources."spdx-expression-parse-3.0.0" + sources."spdx-license-ids-3.0.0" sources."sshpk-1.13.1" sources."strict-uri-encode-1.1.0" sources."string-length-1.0.1" @@ -42675,7 +43523,7 @@ in sources."timed-out-4.0.1" sources."titleize-1.0.0" sources."tmp-0.0.33" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."trim-newlines-1.0.0" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" @@ -42688,9 +43536,9 @@ in dependencies = [ sources."ansi-styles-3.2.0" sources."camelcase-4.1.0" - sources."chalk-2.3.0" + sources."chalk-2.3.1" sources."execa-0.7.0" - sources."supports-color-4.5.0" + sources."supports-color-5.2.0" ]; }) sources."url-parse-lax-3.0.0" @@ -42698,7 +43546,7 @@ in sources."user-home-2.0.0" sources."util-deprecate-1.0.2" sources."uuid-3.2.1" - sources."validate-npm-package-license-3.0.1" + sources."validate-npm-package-license-3.0.3" sources."verror-1.10.0" sources."vinyl-1.2.0" sources."vinyl-file-2.0.0" @@ -42730,11 +43578,11 @@ in (sources."yeoman-environment-2.0.5" // { dependencies = [ sources."ansi-styles-3.2.0" - sources."chalk-2.3.0" + sources."chalk-2.3.1" sources."debug-3.1.0" sources."log-symbols-2.2.0" sources."pify-2.3.0" - sources."supports-color-4.5.0" + sources."supports-color-5.2.0" ]; }) (sources."yosay-2.0.1" // { diff --git a/pkgs/development/node-packages/node-packages-v8.nix b/pkgs/development/node-packages/node-packages-v8.nix index 7397866ccea8..ce7b70b3fdcc 100644 --- a/pkgs/development/node-packages/node-packages-v8.nix +++ b/pkgs/development/node-packages/node-packages-v8.nix @@ -1,432 +1,9 @@ -# This file has been generated by node2nix 1.5.1. Do not edit! +# This file has been generated by node2nix 1.5.2. Do not edit! {nodeEnv, fetchurl, fetchgit, globalBuildInputs ? []}: let sources = { - "@most/multicast-1.3.0" = { - name = "_at_most_slash_multicast"; - packageName = "@most/multicast"; - version = "1.3.0"; - src = fetchurl { - url = "https://registry.npmjs.org/@most/multicast/-/multicast-1.3.0.tgz"; - sha512 = "2zs8n5gpgl9frbw960m4q63svcgvqkbb9iay3klw3qcj4c0hwbw6llbkj9h4v13s1fh5gc4k6zg2cxpz4vipbp6kzbrd9v0500zqq8d"; - }; - }; - "@most/prelude-1.7.0" = { - name = "_at_most_slash_prelude"; - packageName = "@most/prelude"; - version = "1.7.0"; - src = fetchurl { - url = "https://registry.npmjs.org/@most/prelude/-/prelude-1.7.0.tgz"; - sha512 = "0cdx6nag042jl38sm34c4cpc70wya0xns7f5j9i3hs8kwca8lkgbss9db6jkgd090hpvxq2qh5fzxnfnw705ph1zklgmnxf9wgw4l1s"; - }; - }; - "@pnpm/check-package-1.0.0" = { - name = "_at_pnpm_slash_check-package"; - packageName = "@pnpm/check-package"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/@pnpm/check-package/-/check-package-1.0.0.tgz"; - sha512 = "1hg0g5snqp1lkmnmis335fpvg7xz93snvlbzqmyxxmyl0ab2d4wdlar6rwl7gr59113cpsyn2k3sawh656zrp6fp8q1rdy6x24a3pxc"; 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- }; - }; - "JSONStream-1.3.2" = { - name = "JSONStream"; - packageName = "JSONStream"; - version = "1.3.2"; - src = fetchurl { - url = "https://registry.npmjs.org/JSONStream/-/JSONStream-1.3.2.tgz"; - sha1 = "c102371b6ec3a7cf3b847ca00c20bb0fce4c6dea"; - }; - }; "abbrev-1.1.1" = { name = "abbrev"; packageName = "abbrev"; @@ -445,33 +22,6 @@ let sha1 = "9a8eac8ff79866f3f9b4bb1443ca778f1598aeda"; }; }; - "add-subtract-date-1.0.13" = { - name = "add-subtract-date"; - packageName = "add-subtract-date"; - version = "1.0.13"; - src = fetchurl { - url = "https://registry.npmjs.org/add-subtract-date/-/add-subtract-date-1.0.13.tgz"; - sha512 = "1jpp2jqxqm1ljj8a6xs15yl579jc48fdx4kflfd0faa78gy91gda0svy4jdv5dqqj1c5ccssq24kyz1ck5c3g4qykia2x32qmc2rc5x"; - }; - }; - "agent-base-4.2.0" = { - name = "agent-base"; - packageName = "agent-base"; - version = "4.2.0"; - src = fetchurl { - url = "https://registry.npmjs.org/agent-base/-/agent-base-4.2.0.tgz"; - sha512 = "0i6q0c347f7z5c56gi1cggjiwvdhl3p9zfsysq66gqggk3prlqildnpva900rz8f8gfc8rav8jk7m51z9dhias0z7v3rnzyjm9pzr3k"; - }; - }; - "agentkeepalive-3.3.0" = { - name = "agentkeepalive"; - packageName = "agentkeepalive"; - version = "3.3.0"; - src = fetchurl { - url = "https://registry.npmjs.org/agentkeepalive/-/agentkeepalive-3.3.0.tgz"; - sha512 = "0svpj8gbh57a1l3zcds9kd8dkh4r2fyacpkrxvffbpj5pgvbf26h93q31niqbqsciswdxlx0fhikljqwg40lvmwxl299nb2gfjmqa7p"; - }; - }; "ajv-4.11.8" = { name = "ajv"; packageName = "ajv"; @@ -490,15 +40,6 @@ let sha1 = "73b5eeca3fab653e3d3f9422b341ad42205dc965"; }; }; - "ansi-align-2.0.0" = { - name = "ansi-align"; - packageName = "ansi-align"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/ansi-align/-/ansi-align-2.0.0.tgz"; - sha1 = "c36aeccba563b89ceb556f3690f0b1d9e3547f7f"; - }; - }; "ansi-diff-stream-1.2.0" = { name = "ansi-diff-stream"; packageName = "ansi-diff-stream"; @@ -508,51 +49,6 @@ let sha1 = "eb325c20ac3623ecd592011a9295d76d97de460e"; }; }; - "ansi-escapes-1.4.0" = { - name = "ansi-escapes"; - packageName = "ansi-escapes"; - version = "1.4.0"; - src = fetchurl { - url = "https://registry.npmjs.org/ansi-escapes/-/ansi-escapes-1.4.0.tgz"; - sha1 = "d3a8a83b319aa67793662b13e761c7911422306e"; - }; - }; - "ansi-escapes-3.0.0" = { - name = "ansi-escapes"; - packageName = "ansi-escapes"; - version = "3.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/ansi-escapes/-/ansi-escapes-3.0.0.tgz"; - sha512 = "06szfav8g7xywvqsis16nnkjqs2snhv37r4m53l1ax8k2sahvqv9id2klam32jajqd08ylw8g9wbcjr971igx6vh8idan76drrjby9v"; - }; - }; - "ansi-parser-2.0.0" = { - name = "ansi-parser"; - packageName = "ansi-parser"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/ansi-parser/-/ansi-parser-2.0.0.tgz"; - sha1 = "433498af32fee8c2a1df2c4e47941bc029bcf407"; - }; - }; - "ansi-parser-3.0.0" = { - name = "ansi-parser"; - packageName = "ansi-parser"; - version = "3.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/ansi-parser/-/ansi-parser-3.0.0.tgz"; - sha1 = "945c0e7232caf5675217375b3eb8892008c14629"; - }; - }; - "ansi-parser-3.2.8" = { - name = "ansi-parser"; - packageName = "ansi-parser"; - version = "3.2.8"; - src = fetchurl { - url = "https://registry.npmjs.org/ansi-parser/-/ansi-parser-3.2.8.tgz"; - sha1 = "ad80a6351ac5e58cc7e8a761abc037b5505041d0"; - }; - }; "ansi-regex-2.1.1" = { name = "ansi-regex"; packageName = "ansi-regex"; @@ -571,15 +67,6 @@ let sha1 = "ed0317c322064f79466c02966bddb605ab37d998"; }; }; - "ansi-styles-2.2.1" = { - name = "ansi-styles"; - packageName = "ansi-styles"; - version = "2.2.1"; - src = fetchurl { - url = "https://registry.npmjs.org/ansi-styles/-/ansi-styles-2.2.1.tgz"; - sha1 = "b432dd3358b634cf75e1e4664368240533c1ddbe"; - }; - }; "ansi-styles-3.2.0" = { name = "ansi-styles"; packageName = "ansi-styles"; @@ -589,42 +76,6 @@ let sha512 = "2x19fs1qvg7ifsdvii4g8kqpa5hir1lm0k0y0fz6dhm5c8gh4z9il4wqczl078p2ikmrav23dmj86cxy8y1j22k4mv59d8qq6c8wx1n"; }; }; - "ansicolors-0.3.2" = { - name = "ansicolors"; - packageName = "ansicolors"; - version = "0.3.2"; - src = fetchurl { - url = "https://registry.npmjs.org/ansicolors/-/ansicolors-0.3.2.tgz"; - sha1 = "665597de86a9ffe3aa9bfbe6cae5c6ea426b4979"; - }; - }; - "ansistyles-0.1.3" = { - name = "ansistyles"; - packageName = "ansistyles"; - version = "0.1.3"; - src = fetchurl { - url = "https://registry.npmjs.org/ansistyles/-/ansistyles-0.1.3.tgz"; - sha1 = "5de60415bda071bb37127854c864f41b23254539"; - }; - }; - "ansy-1.0.13" = { - name = "ansy"; - packageName = "ansy"; - version = "1.0.13"; - src = fetchurl { - url = "https://registry.npmjs.org/ansy/-/ansy-1.0.13.tgz"; - sha512 = "1a13d7ws8k5vnckqfbrlmmmdxxmj0fjlsgs4h1g8ymmm6fz019gykr01kr479dsqzikgcbmz56jnfj1jjknllij7b840w7mzhvpxvyc"; - }; - }; - "any-promise-1.3.0" = { - name = "any-promise"; - packageName = "any-promise"; - version = "1.3.0"; - src = fetchurl { - url = "https://registry.npmjs.org/any-promise/-/any-promise-1.3.0.tgz"; - sha1 = "abc6afeedcea52e809cdc0376aed3ce39635d17f"; - }; - }; "anymatch-1.3.2" = { name = "anymatch"; packageName = "anymatch"; @@ -661,15 +112,6 @@ let sha512 = "13mgnbmdhdq0qncijvpip1l39q1a8labcvj3hc3n1yl2zch106mdkn7p7bd5knvmfkkn1js9nd47nzyjk1himbm8ry8i8gd6mk7mlk3"; }; }; - "archy-1.0.0" = { - name = "archy"; - packageName = "archy"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/archy/-/archy-1.0.0.tgz"; - sha1 = "f9c8c13757cc1dd7bc379ac77b2c62a5c2868c40"; - }; - }; "are-we-there-yet-1.1.4" = { name = "are-we-there-yet"; packageName = "are-we-there-yet"; @@ -679,15 +121,6 @@ let sha1 = "bb5dca382bb94f05e15194373d16fd3ba1ca110d"; }; }; - "argparse-1.0.9" = { - name = "argparse"; - packageName = "argparse"; - version = "1.0.9"; - src = fetchurl { - url = "https://registry.npmjs.org/argparse/-/argparse-1.0.9.tgz"; - sha1 = "73d83bc263f86e97f8cc4f6bae1b0e90a7d22c86"; - }; - }; "arr-diff-2.0.0" = { name = "arr-diff"; packageName = "arr-diff"; @@ -706,33 +139,6 @@ let sha512 = "2vdly17xk5kw7bfzajrjdnw4ml3wrfblx8064n0i4fxlchcscx2mvnwkq2bnnqvbqvdy4vs9ad462lz0rid7khysly9m9vzjiblly1g"; }; }; - "array-find-index-1.0.2" = { - name = "array-find-index"; - packageName = "array-find-index"; - version = "1.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/array-find-index/-/array-find-index-1.0.2.tgz"; - sha1 = "df010aa1287e164bbda6f9723b0a96a1ec4187a1"; - }; - }; - "array-flatten-2.1.1" = { - name = "array-flatten"; - packageName = "array-flatten"; - version = "2.1.1"; - src = fetchurl { - url = "https://registry.npmjs.org/array-flatten/-/array-flatten-2.1.1.tgz"; - sha1 = "426bb9da84090c1838d812c8150af20a8331e296"; - }; - }; - "array-includes-3.0.3" = { - name = "array-includes"; - packageName = "array-includes"; - version = "3.0.3"; - src = fetchurl { - url = "https://registry.npmjs.org/array-includes/-/array-includes-3.0.3.tgz"; - sha1 = "184b48f62d92d7452bb31b323165c7f8bd02266d"; - }; - }; "array-lru-1.1.1" = { name = "array-lru"; packageName = "array-lru"; @@ -742,24 +148,6 @@ let sha1 = "0c7e1b4e022ae166ff1e8448c595f3181fcd3337"; }; }; - "array-union-1.0.2" = { - name = "array-union"; - packageName = "array-union"; - version = "1.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/array-union/-/array-union-1.0.2.tgz"; - sha1 = "9a34410e4f4e3da23dea375be5be70f24778ec39"; - }; - }; - "array-uniq-1.0.3" = { - name = "array-uniq"; - packageName = "array-uniq"; - version = "1.0.3"; - src = fetchurl { - url = "https://registry.npmjs.org/array-uniq/-/array-uniq-1.0.3.tgz"; - sha1 = "af6ac877a25cc7f74e058894753858dfdb24fdb6"; - }; - }; "array-unique-0.2.1" = { name = "array-unique"; packageName = "array-unique"; @@ -769,33 +157,6 @@ let sha1 = "a1d97ccafcbc2625cc70fadceb36a50c58b01a53"; }; }; - "arrify-1.0.1" = { - name = "arrify"; - packageName = "arrify"; - version = "1.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/arrify/-/arrify-1.0.1.tgz"; - sha1 = "898508da2226f380df904728456849c1501a4b0d"; - }; - }; - "as-table-1.0.31" = { - name = "as-table"; - packageName = "as-table"; - version = "1.0.31"; - src = fetchurl { - url = "https://registry.npmjs.org/as-table/-/as-table-1.0.31.tgz"; - sha1 = "d00180024ecbb6d1a747150df751d3716aea8166"; - }; - }; - "asap-2.0.6" = { - name = "asap"; - packageName = "asap"; - version = "2.0.6"; - src = fetchurl { - url = "https://registry.npmjs.org/asap/-/asap-2.0.6.tgz"; - sha1 = "e50347611d7e690943208bbdafebcbc2fb866d46"; - }; - }; "asn1-0.2.3" = { name = "asn1"; packageName = "asn1"; @@ -895,15 +256,6 @@ let sha1 = "83ef5ca860b2b32e4a0deedee8c771b9db57471e"; }; }; - "babel-runtime-6.26.0" = { - name = "babel-runtime"; - packageName = "babel-runtime"; - version = "6.26.0"; - src = fetchurl { - url = "https://registry.npmjs.org/babel-runtime/-/babel-runtime-6.26.0.tgz"; - sha1 = "965c7058668e82b55d7bfe04ff2337bc8b5647fe"; - }; - }; "balanced-match-1.0.0" = { name = "balanced-match"; packageName = "balanced-match"; @@ -913,15 +265,6 @@ let sha1 = "89b4d199ab2bee49de164ea02b89ce462d71b767"; }; }; - "base64-js-0.0.8" = { - name = "base64-js"; - packageName = "base64-js"; - version = "0.0.8"; - src = fetchurl { - url = "https://registry.npmjs.org/base64-js/-/base64-js-0.0.8.tgz"; - sha1 = "1101e9544f4a76b1bc3b26d452ca96d7a35e7978"; - }; - }; "bcrypt-pbkdf-1.0.1" = { name = "bcrypt-pbkdf"; packageName = "bcrypt-pbkdf"; @@ -940,15 +283,6 @@ let sha512 = "1kvjv5hs1c53b5g2vghpnncn4zj397sa0vpbx1pzpn8ngq52s3xq9923gnl2kzkh1mhyrl277jrh87a766yks89qvz8b4jczr44xr9p"; }; }; - "bindings-1.3.0" = { - name = "bindings"; - packageName = "bindings"; - version = "1.3.0"; - src = fetchurl { - url = "https://registry.npmjs.org/bindings/-/bindings-1.3.0.tgz"; - sha512 = "15lvjac4av3h7xmks8jgd56vryz5xb27r8xcpfwhfyr9dv305lms5llc1x6nx6nfvha873d4vg04nfi89aj4jkxplrnjiyc9kjf34hf"; - }; - }; "bitfield-rle-2.1.0" = { name = "bitfield-rle"; packageName = "bitfield-rle"; @@ -967,15 +301,6 @@ let sha512 = "10md5792s6q3xwdrmwh1a8ax9w128g607b5qsbxzw8x0gl9184g754hprchl6mq8lmf4f8qylk2h8vavsnbn9yy9gzjnyh2kwrzmxky"; }; }; - "bl-1.2.1" = { - name = "bl"; - packageName = "bl"; - version = "1.2.1"; - src = fetchurl { - url = "https://registry.npmjs.org/bl/-/bl-1.2.1.tgz"; - sha1 = "cac328f7bee45730d404b692203fcb590e172d5e"; - }; - }; "blake2b-2.1.2" = { name = "blake2b"; packageName = "blake2b"; @@ -1003,15 +328,6 @@ let sha1 = "13ebfe778a03205cfe03751481ebb4b3300c126a"; }; }; - "bluebird-3.5.1" = { - name = "bluebird"; - packageName = "bluebird"; - version = "3.5.1"; - src = fetchurl { - url = "https://registry.npmjs.org/bluebird/-/bluebird-3.5.1.tgz"; - sha512 = "2631bhp784qng0ifbypsmvijn6kjfvkhq2335kdz8ix5qi3wb3lbpg94xjn1av2s6i95ygr5a4y9j1721dw6zdbywwh1m48by4qpa1h"; - }; - }; "body-0.1.0" = { name = "body"; packageName = "body"; @@ -1021,15 +337,6 @@ let sha1 = "e714fe28cd8848aa34cdf2c9f242bbe2e15d1cd8"; }; }; - "bole-3.0.2" = { - name = "bole"; - packageName = "bole"; - version = "3.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/bole/-/bole-3.0.2.tgz"; - sha1 = "bc8a483ca94049da9b837c1ad11cdfebee6e0514"; - }; - }; "boom-2.10.1" = { name = "boom"; packageName = "boom"; @@ -1057,22 +364,13 @@ let sha512 = "19h20yqpvca08dns1rs4f057f10w63v0snxfml4h5khsk266x3x1im0w72bza4k2xn0kfz6jlv001dhcvxsjr09bmbqnysils9m7437"; }; }; - "boxen-1.3.0" = { - name = "boxen"; - packageName = "boxen"; - version = "1.3.0"; - src = fetchurl { - url = "https://registry.npmjs.org/boxen/-/boxen-1.3.0.tgz"; - sha512 = "0pmn5jcnph7yfgfhlncg1lys066cq44kavj4d9qhmyy9705w61pabpwlma09xg4xplzbxh78d3m4xwvjwk478r3xyqnmpzq79yy7lsc"; - }; - }; - "brace-expansion-1.1.8" = { + "brace-expansion-1.1.11" = { name = "brace-expansion"; packageName = "brace-expansion"; - version = "1.1.8"; + version = "1.1.11"; src = fetchurl { - url = "https://registry.npmjs.org/brace-expansion/-/brace-expansion-1.1.8.tgz"; - sha1 = "c07b211c7c952ec1f8efd51a77ef0d1d3990a292"; + url = "https://registry.npmjs.org/brace-expansion/-/brace-expansion-1.1.11.tgz"; + sha512 = "248cnpbbf0p32h53rd3g8wzpgrkaj4p078ra1g6l16f82i6bzkvmhwqan5rk88apbll9ly1476kngd7f7z27i3b3zxpbb3064f8yaw8"; }; }; "braces-1.8.5" = { @@ -1093,33 +391,6 @@ let sha1 = "f351d32969d32fa5d7a5567154263d928ae3bd1f"; }; }; - "browserify-zlib-0.1.4" = { - name = "browserify-zlib"; - packageName = "browserify-zlib"; - version = "0.1.4"; - src = fetchurl { - url = "https://registry.npmjs.org/browserify-zlib/-/browserify-zlib-0.1.4.tgz"; - sha1 = "bb35f8a519f600e0fa6b8485241c979d0141fb2d"; - }; - }; - "buffer-3.6.0" = { - name = "buffer"; - packageName = "buffer"; - version = "3.6.0"; - src = fetchurl { - url = "https://registry.npmjs.org/buffer/-/buffer-3.6.0.tgz"; - sha1 = "a72c936f77b96bf52f5f7e7b467180628551defb"; - }; - }; - "buffer-alloc-unsafe-1.0.0" = { - name = "buffer-alloc-unsafe"; - packageName = "buffer-alloc-unsafe"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/buffer-alloc-unsafe/-/buffer-alloc-unsafe-1.0.0.tgz"; - sha1 = "474aa88f34e7bc75fa311d2e6457409c5846c3fe"; - }; - }; "buffer-equals-1.0.4" = { name = "buffer-equals"; packageName = "buffer-equals"; @@ -1138,33 +409,6 @@ let sha512 = "3bgz1zhq9ng3gypq825f00p9qi9y6z7wvkkf28nhjlyifnb3lk1dkmbya84k0ja79zv8kmmhvalwcnnz92533ip7pnjp3is1w9cxyp3"; }; }; - "bug-killer-4.4.4" = { - name = "bug-killer"; - packageName = "bug-killer"; - version = "4.4.4"; - src = fetchurl { - url = "https://registry.npmjs.org/bug-killer/-/bug-killer-4.4.4.tgz"; - sha1 = "96e0322b9437a2b0672d78aacd1ed2bef11f945a"; - }; - }; - "builtin-modules-1.1.1" = { - name = "builtin-modules"; - packageName = "builtin-modules"; - version = "1.1.1"; - src = fetchurl { - url = "https://registry.npmjs.org/builtin-modules/-/builtin-modules-1.1.1.tgz"; - sha1 = "270f076c5a72c02f5b65a47df94c5fe3a278892f"; - }; - }; - "builtins-1.0.3" = { - name = "builtins"; - packageName = "builtins"; - version = "1.0.3"; - src = fetchurl { - url = "https://registry.npmjs.org/builtins/-/builtins-1.0.3.tgz"; - sha1 = "cb94faeb61c8696451db36534e1422f94f0aee88"; - }; - }; "bulk-write-stream-1.1.3" = { name = "bulk-write-stream"; packageName = "bulk-write-stream"; @@ -1174,15 +418,6 @@ let sha1 = "d29ca385fbd53f357aee5bd3d3028732b62ae275"; }; }; - "byline-5.0.0" = { - name = "byline"; - packageName = "byline"; - version = "5.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/byline/-/byline-5.0.0.tgz"; - sha1 = "741c5216468eadc457b03410118ad77de8c1ddb1"; - }; - }; "bytes-3.0.0" = { name = "bytes"; packageName = "bytes"; @@ -1192,51 +427,6 @@ let sha1 = "d32815404d689699f85a4ea4fa8755dd13a96048"; }; }; - "bzip2-maybe-1.0.0" = { - name = "bzip2-maybe"; - packageName = "bzip2-maybe"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/bzip2-maybe/-/bzip2-maybe-1.0.0.tgz"; - sha1 = "c9aef7008a6b943cbe99cc617125eb4bd478296b"; - }; - }; - "cacache-10.0.2" = { - name = "cacache"; - packageName = "cacache"; - version = "10.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/cacache/-/cacache-10.0.2.tgz"; - sha512 = "1nn7is7pd6vgcf96b9hym6ia3a0adgw2r4a4ckbb9ykm6risqsnw16kgqfrwvi37mpkzizricfnkns7d0d7agh1laws73imv7nxnn3n"; - }; - }; - "cacache-9.2.9" = { - name = "cacache"; - packageName = "cacache"; - version = "9.2.9"; - src = fetchurl { - url = "https://registry.npmjs.org/cacache/-/cacache-9.2.9.tgz"; - sha512 = "11qjza6qy62lkvynngcvx7nf2vhxvvp4g0l07a8zw5pzqc5iy0zznxzgs0dw1bb2i10dr2v7i624x6v9pkzp55snam9wk5jjf7ka642"; - }; - }; - "cacheable-request-2.1.4" = { - name = "cacheable-request"; - packageName = "cacheable-request"; - version = "2.1.4"; - src = fetchurl { - url = "https://registry.npmjs.org/cacheable-request/-/cacheable-request-2.1.4.tgz"; - sha1 = "0d808801b6342ad33c91df9d0b44dc09b91e5c3d"; - }; - }; - "call-limit-1.1.0" = { - name = "call-limit"; - packageName = "call-limit"; - version = "1.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/call-limit/-/call-limit-1.1.0.tgz"; - sha1 = "6fd61b03f3da42a2cd0ec2b60f02bd0e71991fea"; - }; - }; "call-me-maybe-1.0.1" = { name = "call-me-maybe"; packageName = "call-me-maybe"; @@ -1246,24 +436,6 @@ let sha1 = "26d208ea89e37b5cbde60250a15f031c16a4d66b"; }; }; - "camelcase-4.1.0" = { - name = "camelcase"; - packageName = "camelcase"; - version = "4.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/camelcase/-/camelcase-4.1.0.tgz"; - sha1 = "d545635be1e33c542649c69173e5de6acfae34dd"; - }; - }; - "capture-stack-trace-1.0.0" = { - name = "capture-stack-trace"; - packageName = "capture-stack-trace"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/capture-stack-trace/-/capture-stack-trace-1.0.0.tgz"; - sha1 = "4a6fa07399c26bba47f0b2496b4d0fb408c5550d"; - }; - }; "caseless-0.12.0" = { name = "caseless"; packageName = "caseless"; @@ -1273,85 +445,13 @@ let sha1 = "1b681c21ff84033c826543090689420d187151dc"; }; }; - "chalk-1.1.3" = { + "chalk-2.3.1" = { name = "chalk"; packageName = "chalk"; - version = "1.1.3"; + version = "2.3.1"; src = fetchurl { - url = "https://registry.npmjs.org/chalk/-/chalk-1.1.3.tgz"; - sha1 = "a8115c55e4a702fe4d150abd3872822a7e09fc98"; - }; - }; - "chalk-2.3.0" = { - name = "chalk"; - packageName = "chalk"; - version = "2.3.0"; - src = fetchurl { - url = "https://registry.npmjs.org/chalk/-/chalk-2.3.0.tgz"; - sha512 = "3fj8njcdcvyplivm2fj19lqw8qv7gb8v7gd6a223pmn8f3di4zwkhyb09vzlmw3pnk4ib88kp4cg8r9i5k5rskalzdfh1l23ljp6gh3"; - }; - }; - "chownr-1.0.1" = { - name = "chownr"; - packageName = "chownr"; - version = "1.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/chownr/-/chownr-1.0.1.tgz"; - sha1 = "e2a75042a9551908bebd25b8523d5f9769d79181"; - }; - }; - "ci-info-1.1.2" = { - name = "ci-info"; - packageName = "ci-info"; - version = "1.1.2"; - src = fetchurl { - url = "https://registry.npmjs.org/ci-info/-/ci-info-1.1.2.tgz"; - sha512 = "1jbmihk48iby72h0b6k4rvhrnaydml49qyjcb83ix310ivjzd4zmdk3yxx1ssn6ryjblm7xzaswnwj53rxwcyn1fr0jm7bzvhy8hcdr"; - }; - }; - "cidr-regex-1.0.6" = { - name = "cidr-regex"; - packageName = "cidr-regex"; - version = "1.0.6"; - src = fetchurl { - url = "https://registry.npmjs.org/cidr-regex/-/cidr-regex-1.0.6.tgz"; - sha1 = "74abfd619df370b9d54ab14475568e97dd64c0c1"; - }; - }; - "class-methods-1.0.10" = { - name = "class-methods"; - packageName = "class-methods"; - version = "1.0.10"; - src = fetchurl { - url = "https://registry.npmjs.org/class-methods/-/class-methods-1.0.10.tgz"; - sha512 = "2j59qyqmhdcldp2k34mrcfx2rqblcv1c2902zzin1fzqamys2jxs32q341k4faclld17w96w7x3hnv2vjinn0jq0b6a7ld1icaay2wv"; - }; - }; - "cli-box-5.0.0" = { - name = "cli-box"; - packageName = "cli-box"; - version = "5.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/cli-box/-/cli-box-5.0.0.tgz"; - sha1 = "870ea8aa77e7c25179416ceccfe5ed0690804602"; - }; - }; - "cli-boxes-1.0.0" = { - name = "cli-boxes"; - packageName = "cli-boxes"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/cli-boxes/-/cli-boxes-1.0.0.tgz"; - sha1 = "4fa917c3e59c94a004cd61f8ee509da651687143"; - }; - }; - "cli-cursor-2.1.0" = { - name = "cli-cursor"; - packageName = "cli-cursor"; - version = "2.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/cli-cursor/-/cli-cursor-2.1.0.tgz"; - sha1 = "b35dac376479facc3e94747d41d0d0f5238ffcb5"; + url = "https://registry.npmjs.org/chalk/-/chalk-2.3.1.tgz"; + sha512 = "3m0k6j50aridlrk1q8kf3cd1vcj6qcg2nx5yk8d0196hmw0c4a6y1h315p24l34yz0chfrcrkrsr12cixccfp5q7caw5803z6hkhia1"; }; }; "cli-table-0.3.1" = { @@ -1363,15 +463,6 @@ let sha1 = "f53b05266a8b1a0b934b3d0821e6e2dc5914ae23"; }; }; - "cli-table2-0.2.0" = { - name = "cli-table2"; - packageName = "cli-table2"; - version = "0.2.0"; - src = fetchurl { - url = "https://registry.npmjs.org/cli-table2/-/cli-table2-0.2.0.tgz"; - sha1 = "2d1ef7f218a0e786e214540562d4bd177fe32d97"; - }; - }; "cli-truncate-1.1.0" = { name = "cli-truncate"; packageName = "cli-truncate"; @@ -1390,51 +481,6 @@ let sha1 = "69431c7cb5af723774b0d3911b4c37512431910f"; }; }; - "cliui-3.2.0" = { - name = "cliui"; - packageName = "cliui"; - version = "3.2.0"; - src = fetchurl { - url = "https://registry.npmjs.org/cliui/-/cliui-3.2.0.tgz"; - sha1 = "120601537a916d29940f934da3b48d585a39213d"; - }; - }; - "clone-1.0.3" = { - name = "clone"; - packageName = "clone"; - version = "1.0.3"; - src = fetchurl { - url = "https://registry.npmjs.org/clone/-/clone-1.0.3.tgz"; - sha1 = "298d7e2231660f40c003c2ed3140decf3f53085f"; - }; - }; - "clone-response-1.0.2" = { - name = "clone-response"; - packageName = "clone-response"; - version = "1.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/clone-response/-/clone-response-1.0.2.tgz"; - sha1 = "d1dc973920314df67fbeb94223b4ee350239e96b"; - }; - }; - "clp-3.2.1" = { - name = "clp"; - packageName = "clp"; - version = "3.2.1"; - src = fetchurl { - url = "https://registry.npmjs.org/clp/-/clp-3.2.1.tgz"; - sha1 = "af1ed66db895a5c9ce9b6d32e9c33dee02b3edf2"; - }; - }; - "cmd-shim-2.0.2" = { - name = "cmd-shim"; - packageName = "cmd-shim"; - version = "2.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/cmd-shim/-/cmd-shim-2.0.2.tgz"; - sha1 = "6fcbda99483a8fd15d7d30a196ca69d688a2efdb"; - }; - }; "co-4.6.0" = { name = "co"; packageName = "co"; @@ -1498,22 +544,13 @@ let sha1 = "168a4701756b6a7f51a12ce0c97bfa28c084ed63"; }; }; - "columnify-1.5.4" = { - name = "columnify"; - packageName = "columnify"; - version = "1.5.4"; - src = fetchurl { - url = "https://registry.npmjs.org/columnify/-/columnify-1.5.4.tgz"; - sha1 = "4737ddf1c7b69a8a7c340570782e947eec8e78bb"; - }; - }; - "combined-stream-1.0.5" = { + "combined-stream-1.0.6" = { name = "combined-stream"; packageName = "combined-stream"; - version = "1.0.5"; + version = "1.0.6"; src = fetchurl { - url = "https://registry.npmjs.org/combined-stream/-/combined-stream-1.0.5.tgz"; - sha1 = "938370a57b4a51dea2c77c15d5c5fdf895164009"; + url = "https://registry.npmjs.org/combined-stream/-/combined-stream-1.0.6.tgz"; + sha1 = "723e7df6e801ac5613113a7e445a9b69cb632818"; }; }; "commander-2.11.0" = { @@ -1534,15 +571,6 @@ let sha1 = "9c99094176e12240cb22d6c5146098400fe0f7d4"; }; }; - "common-tags-1.7.2" = { - name = "common-tags"; - packageName = "common-tags"; - version = "1.7.2"; - src = fetchurl { - url = "https://registry.npmjs.org/common-tags/-/common-tags-1.7.2.tgz"; - sha512 = "0jx2cncv7x5ms1gg2vks5bhxi9c5jbwymfk42dzmp9vrxrmhrl9vaw4wsh4lvf65shxmq1v8f8s0i3rkyk2x8mrfpq2m30famkgv24f"; - }; - }; "concat-map-0.0.1" = { name = "concat-map"; packageName = "concat-map"; @@ -1561,24 +589,6 @@ let sha1 = "0aac662fd52be78964d5532f694784e70110acf7"; }; }; - "config-chain-1.1.11" = { - name = "config-chain"; - packageName = "config-chain"; - version = "1.1.11"; - src = fetchurl { - url = "https://registry.npmjs.org/config-chain/-/config-chain-1.1.11.tgz"; - sha1 = "aba09747dfbe4c3e70e766a6e41586e1859fc6f2"; - }; - }; - "configstore-3.1.1" = { - name = "configstore"; - packageName = "configstore"; - version = "3.1.1"; - src = fetchurl { - url = "https://registry.npmjs.org/configstore/-/configstore-3.1.1.tgz"; - sha512 = "2zmidvkp20q25yv6a5d7k1daawdg0w6ppgayxzpwfhyvmgwybkkv7ni0j4b2j9c8wjn8z33zf5d4bjr8jywb5qixc75vypyy87n90z6"; - }; - }; "connections-1.4.2" = { name = "connections"; packageName = "connections"; @@ -1606,24 +616,6 @@ let sha1 = "0e790b3abfef90f6ecb77ae8585db9099caf7578"; }; }; - "copy-concurrently-1.0.5" = { - name = "copy-concurrently"; - packageName = "copy-concurrently"; - version = "1.0.5"; - src = fetchurl { - url = "https://registry.npmjs.org/copy-concurrently/-/copy-concurrently-1.0.5.tgz"; - sha512 = "3c1ggiqqnjgqlwdnimx94gm176c8rjsrih5qw2lbm642l8x7grx07v065k4j89c1p0adkm7v6sz11drb6j6sp51np2m1cazvycnhrvz"; - }; - }; - "core-js-2.5.3" = { - name = "core-js"; - packageName = "core-js"; - version = "2.5.3"; - src = fetchurl { - url = "https://registry.npmjs.org/core-js/-/core-js-2.5.3.tgz"; - sha1 = "8acc38345824f16d8365b7c9b4259168e8ed603e"; - }; - }; "core-util-is-1.0.2" = { name = "core-util-is"; packageName = "core-util-is"; @@ -1642,51 +634,6 @@ let sha1 = "11a45bc47ab30c54d00bb869ea1802fbcd9a09d0"; }; }; - "couleurs-5.0.0" = { - name = "couleurs"; - packageName = "couleurs"; - version = "5.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/couleurs/-/couleurs-5.0.0.tgz"; - sha1 = "1cd3ace5cca1bec0041578b27464b2676387f6db"; - }; - }; - "couleurs-6.0.9" = { - name = "couleurs"; - packageName = "couleurs"; - version = "6.0.9"; - src = fetchurl { - url = "https://registry.npmjs.org/couleurs/-/couleurs-6.0.9.tgz"; - sha1 = "b2b2a3ee37dae51875c9efd243ec7e7894afbc9e"; - }; - }; - "create-error-class-3.0.2" = { - name = "create-error-class"; - packageName = "create-error-class"; - version = "3.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/create-error-class/-/create-error-class-3.0.2.tgz"; - sha1 = "06be7abef947a3f14a30fd610671d401bca8b7b6"; - }; - }; - "credentials-by-uri-1.0.0" = { - name = "credentials-by-uri"; - packageName = "credentials-by-uri"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/credentials-by-uri/-/credentials-by-uri-1.0.0.tgz"; - sha512 = "3c5r91jgf91szpxfh7rh0c5wi3xzck43b8kzgmxi3ppw29hj9v9is6a3jh5divbgg7dr5diw6zysri7mpvji5jagh2ain0mcj81knjs"; - }; - }; - "cross-spawn-5.1.0" = { - name = "cross-spawn"; - packageName = "cross-spawn"; - version = "5.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/cross-spawn/-/cross-spawn-5.1.0.tgz"; - sha1 = "e8bd0efee58fcff6f8f94510a0a554bbfa235449"; - }; - }; "cryptiles-2.0.5" = { name = "cryptiles"; packageName = "cryptiles"; @@ -1705,42 +652,6 @@ let sha1 = "a89fbb220f5ce25ec56e8c4aa8a4fd7b5b0d29fe"; }; }; - "crypto-random-string-1.0.0" = { - name = "crypto-random-string"; - packageName = "crypto-random-string"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/crypto-random-string/-/crypto-random-string-1.0.0.tgz"; - sha1 = "a230f64f568310e1498009940790ec99545bca7e"; - }; - }; - "csv-parser-1.12.0" = { - name = "csv-parser"; - packageName = "csv-parser"; - version = "1.12.0"; - src = fetchurl { - url = "https://registry.npmjs.org/csv-parser/-/csv-parser-1.12.0.tgz"; - sha512 = "3amd2y4wd86nqpmj4ngich00g73ldp4di353338vjdsgch52zgc7fl6mgh1yfm9n46nlifh7p0c6y8i8p5al90crkbfnsxw561m9lli"; - }; - }; - "currently-unhandled-0.4.1" = { - name = "currently-unhandled"; - packageName = "currently-unhandled"; - version = "0.4.1"; - src = fetchurl { - url = "https://registry.npmjs.org/currently-unhandled/-/currently-unhandled-0.4.1.tgz"; - sha1 = "988df33feab191ef799a61369dd76c17adf957ea"; - }; - }; - "custom-return-1.0.10" = { - name = "custom-return"; - packageName = "custom-return"; - version = "1.0.10"; - src = fetchurl { - url = "https://registry.npmjs.org/custom-return/-/custom-return-1.0.10.tgz"; - sha512 = "3pk09pi85idb0ycy2hmh3k2cbphacc3hr7rdv157gb93vvk9hfgjnc9dv0k1qvb11h46zpya9njb07f9whrmn31zbx8cf1hchmknpaq"; - }; - }; "cycle-1.0.3" = { name = "cycle"; packageName = "cycle"; @@ -1750,15 +661,6 @@ let sha1 = "21e80b2be8580f98b468f379430662b046c34ad2"; }; }; - "cyclist-0.2.2" = { - name = "cyclist"; - packageName = "cyclist"; - version = "0.2.2"; - src = fetchurl { - url = "https://registry.npmjs.org/cyclist/-/cyclist-0.2.2.tgz"; - sha1 = "1b33792e11e914a2fd6d6ed6447464444e5fa640"; - }; - }; "dashdash-1.14.1" = { name = "dashdash"; packageName = "dashdash"; @@ -1840,13 +742,13 @@ let sha1 = "69449ac8a368593a8f71902b282390c3655ab4b8"; }; }; - "dat-node-3.5.6" = { + "dat-node-3.5.8" = { name = "dat-node"; packageName = "dat-node"; - version = "3.5.6"; + version = "3.5.8"; src = fetchurl { - url = "https://registry.npmjs.org/dat-node/-/dat-node-3.5.6.tgz"; - sha512 = "17i7n2n3bappi34pnv2240cr5baawf2ab8wf22bmlxx4xkcb5g0z24ycz542fsx8myn4fyjgfgdhwbv44f5sz1c4z7i7g4q3ah9n7zh"; + url = "https://registry.npmjs.org/dat-node/-/dat-node-3.5.8.tgz"; + sha512 = "3j28p80dwmic3g00asmcpgiv3sh3s8023x1023g7bm534h1ai8i2zryivx95gc22is64k9mynmqr2g0ny25xp1f7h1cbc25klizg8dc"; }; }; "dat-registry-4.0.0" = { @@ -1858,22 +760,22 @@ let sha512 = "0h84fdzm556p412p1xr0nl6ldf5xjd0qnd37im41bq78zm7lg4j4klcahg9pix1f0qdyd6gqz2a2j67z6vpb776v1bd0n1hr67pp988"; }; }; - "dat-secret-storage-4.0.0" = { + "dat-secret-storage-4.0.1" = { name = "dat-secret-storage"; packageName = "dat-secret-storage"; - version = "4.0.0"; + version = "4.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/dat-secret-storage/-/dat-secret-storage-4.0.0.tgz"; - sha1 = "01b219a5bc1619efc0f58122a3c6cebb1eb8b40a"; + url = "https://registry.npmjs.org/dat-secret-storage/-/dat-secret-storage-4.0.1.tgz"; + sha512 = "3ad9x7n3qxivrj03fsa8ll3i511ivclnyrv1421zklnmskkxxi2d2fykb1kx1sbwdyx35167a7k4mbw63jhxxaz6r54hpd9fad5wj05"; }; }; - "dat-storage-1.0.3" = { + "dat-storage-1.0.4" = { name = "dat-storage"; packageName = "dat-storage"; - version = "1.0.3"; + version = "1.0.4"; src = fetchurl { - url = "https://registry.npmjs.org/dat-storage/-/dat-storage-1.0.3.tgz"; - sha512 = "1n7gszxdkchx0bilz4phnanzmw00fkljwm9rl0z7cndi94xrb6pkzczh6x137xn62j9p7yp6nz24a82q8llsrlk3c1pwvn269cdx97a"; + url = "https://registry.npmjs.org/dat-storage/-/dat-storage-1.0.4.tgz"; + sha512 = "13cbr004milnmjisg774rqqw82vyjg1p1d6gvm3xji516rq7zzc1x7da397njig5s2rg2qmw1dixdn4cpkmvc8irq4y1dzb3h46sz2c"; }; }; "dat-swarm-defaults-1.0.0" = { @@ -1885,24 +787,6 @@ let sha1 = "ba7d58c309cf60c3924afad869b75192b61fe354"; }; }; - "data-uri-to-buffer-2.0.0" = { - name = "data-uri-to-buffer"; - packageName = "data-uri-to-buffer"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/data-uri-to-buffer/-/data-uri-to-buffer-2.0.0.tgz"; - sha512 = "1pvmcndfngvwy1z5x3vhy8jvrcpaahgc8jhq7cpnjcb2zfacai445afjpykxyzy8s6css19p1rl3ab91vz22fa1ffkqhgygncs85ck1"; - }; - }; - "date-unit-ms-1.1.12" = { - name = "date-unit-ms"; - packageName = "date-unit-ms"; - version = "1.1.12"; - src = fetchurl { - url = "https://registry.npmjs.org/date-unit-ms/-/date-unit-ms-1.1.12.tgz"; - sha512 = "39jwcz9i3f80f9sqx06abcpk9zs9dw90gyy2pb603h1h5q0ph2qpx005wzmmn0phfg83d4nx2d14p3lgfn1ywa6yfcc71rnnbw3l3f3"; - }; - }; "datland-swarm-defaults-1.0.2" = { name = "datland-swarm-defaults"; packageName = "datland-swarm-defaults"; @@ -1912,24 +796,6 @@ let sha1 = "277b895a39f1aa7f96a495a02fb3662a5ed9f2e0"; }; }; - "daty-1.1.4" = { - name = "daty"; - packageName = "daty"; - version = "1.1.4"; - src = fetchurl { - url = "https://registry.npmjs.org/daty/-/daty-1.1.4.tgz"; - sha512 = "0a8n1f6rfaa6k4r76b2rqgvfp9qvw5xj7w0lzjfv1g4fxcjllk519vj3jfrx540jiv2mbpky6jv17d3zhwc0jg0a9rbnc0k1m4m5dgs"; - }; - }; - "days-1.1.1" = { - name = "days"; - packageName = "days"; - version = "1.1.1"; - src = fetchurl { - url = "https://registry.npmjs.org/days/-/days-1.1.1.tgz"; - sha512 = "13wlz4m9gk0wf2w3x44y2gph1mmqmj8z1mfkhxpxhjk3rs7h28gj6lc8x0b6i966w00dvrws86da672vmizmy31whvj08q4bg0qhdxz"; - }; - }; "debug-2.6.9" = { name = "debug"; packageName = "debug"; @@ -1948,51 +814,6 @@ let sha512 = "3g1hqsahr1ks2kpvdxrwzr57fj90nnr0hvwwrw8yyyzcv3i11sym8zwibxx67bl1mln0acddrzpkkdjjxnc6n2cm9fazmgzzsl1fzrr"; }; }; - "debuglog-1.0.1" = { - name = "debuglog"; - packageName = "debuglog"; - version = "1.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/debuglog/-/debuglog-1.0.1.tgz"; - sha1 = "aa24ffb9ac3df9a2351837cfb2d279360cd78492"; - }; - }; - "decamelize-1.2.0" = { - name = "decamelize"; - packageName = "decamelize"; - version = "1.2.0"; - src = fetchurl { - url = "https://registry.npmjs.org/decamelize/-/decamelize-1.2.0.tgz"; - sha1 = "f6534d15148269b20352e7bee26f501f9a191290"; - }; - }; - "decode-uri-component-0.2.0" = { - name = "decode-uri-component"; - packageName = "decode-uri-component"; - version = "0.2.0"; - src = fetchurl { - url = "https://registry.npmjs.org/decode-uri-component/-/decode-uri-component-0.2.0.tgz"; - sha1 = "eb3913333458775cb84cd1a1fae062106bb87545"; - }; - }; - "decompress-maybe-1.0.0" = { - name = "decompress-maybe"; - packageName = "decompress-maybe"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/decompress-maybe/-/decompress-maybe-1.0.0.tgz"; - sha1 = "adfe78c66cc069e64e824bd1405b85e75e6d1cbb"; - }; - }; - "decompress-response-3.3.0" = { - name = "decompress-response"; - packageName = "decompress-response"; - version = "3.3.0"; - src = fetchurl { - url = "https://registry.npmjs.org/decompress-response/-/decompress-response-3.3.0.tgz"; - sha1 = "80a4dd323748384bfa248083622aedec982adff3"; - }; - }; "deep-equal-0.2.2" = { name = "deep-equal"; packageName = "deep-equal"; @@ -2011,51 +832,6 @@ let sha1 = "48b699c27e334bf89f10892be432f6e4c7d34a7f"; }; }; - "defaults-1.0.3" = { - name = "defaults"; - packageName = "defaults"; - version = "1.0.3"; - src = fetchurl { - url = "https://registry.npmjs.org/defaults/-/defaults-1.0.3.tgz"; - sha1 = "c656051e9817d9ff08ed881477f3fe4019f3ef7d"; - }; - }; - "deffy-2.0.0" = { - name = "deffy"; - packageName = "deffy"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/deffy/-/deffy-2.0.0.tgz"; - sha1 = "f82e08eea518c4a0a30b1f03ec504d248af28932"; - }; - }; - "deffy-2.2.2" = { - name = "deffy"; - packageName = "deffy"; - version = "2.2.2"; - src = fetchurl { - url = "https://registry.npmjs.org/deffy/-/deffy-2.2.2.tgz"; - sha1 = "088f40913cb47078653fa6f697c206e03471d523"; - }; - }; - "define-properties-1.1.2" = { - name = "define-properties"; - packageName = "define-properties"; - version = "1.1.2"; - src = fetchurl { - url = "https://registry.npmjs.org/define-properties/-/define-properties-1.1.2.tgz"; - sha1 = "83a73f2fea569898fb737193c8f873caf6d45c94"; - }; - }; - "delay-2.0.0" = { - name = "delay"; - packageName = "delay"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/delay/-/delay-2.0.0.tgz"; - sha1 = "9112eadc03e4ec7e00297337896f273bbd91fae5"; - }; - }; "delayed-stream-1.0.0" = { name = "delayed-stream"; packageName = "delayed-stream"; @@ -2074,33 +850,6 @@ let sha1 = "84c6e159b81904fdca59a0ef44cd870d31250f9a"; }; }; - "dependencies-hierarchy-2.0.1" = { - name = "dependencies-hierarchy"; - packageName = "dependencies-hierarchy"; - version = "2.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/dependencies-hierarchy/-/dependencies-hierarchy-2.0.1.tgz"; - sha512 = "1sfyf5x0ffhb2yh04wcwd0szfknjfrf21ibabzk780m31ww4fnzm01ddr9h3j1wfn4ib15pjvg24kylhs2l9g5fg9gnkirpa7zphyxz"; - }; - }; - "dependency-path-1.2.0" = { - name = "dependency-path"; - packageName = "dependency-path"; - version = "1.2.0"; - src = fetchurl { - url = "https://registry.npmjs.org/dependency-path/-/dependency-path-1.2.0.tgz"; - sha512 = "3fx4g67dcmnhggas6gyk3qd0376f5ff9imzi9n3npqjdbnxqd0niagdl591n64mlk8l8rrnkp39fj7cgbd05az9k5b2ir5pr73lf9aq"; - }; - }; - "detect-indent-5.0.0" = { - name = "detect-indent"; - packageName = "detect-indent"; - version = "5.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/detect-indent/-/detect-indent-5.0.0.tgz"; - sha1 = "3871cc0a6a002e8c3e5b3cf7f336264675f06b9d"; - }; - }; "detect-libc-1.0.3" = { name = "detect-libc"; packageName = "detect-libc"; @@ -2110,24 +859,6 @@ let sha1 = "fa137c4bd698edf55cd5cd02ac559f91a4c4ba9b"; }; }; - "dezalgo-1.0.3" = { - name = "dezalgo"; - packageName = "dezalgo"; - version = "1.0.3"; - src = fetchurl { - url = "https://registry.npmjs.org/dezalgo/-/dezalgo-1.0.3.tgz"; - sha1 = "7f742de066fc748bc8db820569dddce49bf0d456"; - }; - }; - "diable-4.0.1" = { - name = "diable"; - packageName = "diable"; - version = "4.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/diable/-/diable-4.0.1.tgz"; - sha512 = "3xs7mj78f1pz54n7lgqczhksnznrsj1bz0733lnrsarqshqci89980q25yms1iva430jfxsjd9kgk4f1f30y3xpyi8krd0vkb57xkl6"; - }; - }; "diff-3.3.1" = { name = "diff"; packageName = "diff"; @@ -2137,33 +868,6 @@ let sha512 = "31pj7v5gg5igmvwzk6zxw1wbvwjg6m9sfl0h3bs1x4q6idcw98vr8z8wcqk2603q0blpqkmkxp659kjj91wksr03yr8xlh16djcg8rh"; }; }; - "diff-dates-1.0.11" = { - name = "diff-dates"; - packageName = "diff-dates"; - version = "1.0.11"; - src = fetchurl { - url = "https://registry.npmjs.org/diff-dates/-/diff-dates-1.0.11.tgz"; - sha512 = "3n24i042lak0xiwsf39kqkmgfjpk3yy7b7s5j4yli6a41h438lh8khdn0zg71jz30vmz0iil8bpjbm0amy24mmbyf4vz5jwp7z312fj"; - }; - }; - "dint-2.0.2" = { - name = "dint"; - packageName = "dint"; - version = "2.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/dint/-/dint-2.0.2.tgz"; - sha512 = "1kj5zqj3mz3jr7624dszj4qnypqa6z1ll8ysn56mibmchrdfb6x82ncfr8jl1h2igla24kp7kbivpmzzjp1zbb29s2gwj9y0zzrmf9v"; - }; - }; - "dir-glob-2.0.0" = { - name = "dir-glob"; - packageName = "dir-glob"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/dir-glob/-/dir-glob-2.0.0.tgz"; - sha512 = "1m705yfirf97v4w87gfvylhhq9jlwjsgfp5x0p0cp33mc180ldmvgbs06zmr7by48d7r01n3awx4xz3m3vzba99gqww1wgka2na5fnz"; - }; - }; "directory-index-html-2.1.0" = { name = "directory-index-html"; packageName = "directory-index-html"; @@ -2236,51 +940,6 @@ let sha1 = "672226dc74c8f799ad35307df936aba11acd6018"; }; }; - "dot-prop-4.2.0" = { - name = "dot-prop"; - packageName = "dot-prop"; - version = "4.2.0"; - src = fetchurl { - url = "https://registry.npmjs.org/dot-prop/-/dot-prop-4.2.0.tgz"; - sha512 = "2wyv9brsq3dzp724y1q5z5j5ja83y834hgc193lnarfdycwz1ii3xg02qxx3dg05x3skwjm1di5s5a8hqi8l5v1afx2bia436pifhxm"; - }; - }; - "dotenv-4.0.0" = { - name = "dotenv"; - packageName = "dotenv"; - version = "4.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/dotenv/-/dotenv-4.0.0.tgz"; - sha1 = "864ef1379aced55ce6f95debecdce179f7a0cd1d"; - }; - }; - "drive-by-path-1.0.0" = { - name = "drive-by-path"; - packageName = "drive-by-path"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/drive-by-path/-/drive-by-path-1.0.0.tgz"; - sha512 = "2qa8hminmq4ccas79iblr6bhpi5db7pr4wprwabf3b26mzky20grbamh8w91x0305gr9ab0hg314dqbhk7fjqylrzc5f8aq21mkl9hm"; - }; - }; - "drivelist-5.2.12" = { - name = "drivelist"; - packageName = "drivelist"; - version = "5.2.12"; - src = fetchurl { - url = "https://registry.npmjs.org/drivelist/-/drivelist-5.2.12.tgz"; - sha512 = "16zzhdm5j9sxfgcgh547v4s5y3han38a5iwj8ap8glp5ql6vbrl01jj6dsjpiqlbjf56pxla8shnz64yjngvnq0zcdkabns4cr1i0lp"; - }; - }; - "duplexer3-0.1.4" = { - name = "duplexer3"; - packageName = "duplexer3"; - version = "0.1.4"; - src = fetchurl { - url = "https://registry.npmjs.org/duplexer3/-/duplexer3-0.1.4.tgz"; - sha1 = "ee01dd1cac0ed3cbc7fdbea37dc0a8f1ce002ce2"; - }; - }; "duplexify-3.5.3" = { name = "duplexify"; packageName = "duplexify"; @@ -2299,33 +958,6 @@ let sha1 = "0fc73a9ed5f0d53c38193398523ef7e543777505"; }; }; - "editor-1.0.0" = { - name = "editor"; - packageName = "editor"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/editor/-/editor-1.0.0.tgz"; - sha1 = "60c7f87bd62bcc6a894fa8ccd6afb7823a24f742"; - }; - }; - "encode-registry-1.1.0" = { - name = "encode-registry"; - packageName = "encode-registry"; - version = "1.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/encode-registry/-/encode-registry-1.1.0.tgz"; - sha512 = "0s849n20b958rnb9r35b9i0l6zvpk0vx49c6xap06fy5iq1zz0ls0wqc1bdskw1v39z5xz4a8sfaigsw0rjfckic6xlxmw4ybvn9vf1"; - }; - }; - "encoding-0.1.12" = { - name = "encoding"; - packageName = "encoding"; - version = "0.1.12"; - src = fetchurl { - url = "https://registry.npmjs.org/encoding/-/encoding-0.1.12.tgz"; - sha1 = "538b66f3ee62cd1ab51ec323829d1f9480c74beb"; - }; - }; "end-of-stream-1.4.1" = { name = "end-of-stream"; packageName = "end-of-stream"; @@ -2335,69 +967,6 @@ let sha512 = "3cjrpi6n5i6gf8jaiwg31y2xkgx59szhhcj9myqwmdw16s9r6yvwznxd2lhqf96mpm6knyb3w2bcnksg5nzkrq6iada0k6nvdj2pjfl"; }; }; - "err-code-1.1.2" = { - name = "err-code"; - packageName = "err-code"; - version = "1.1.2"; - src = fetchurl { - url = "https://registry.npmjs.org/err-code/-/err-code-1.1.2.tgz"; - sha1 = "06e0116d3028f6aef4806849eb0ea6a748ae6960"; - }; - }; - "errno-0.1.6" = { - name = "errno"; - packageName = "errno"; - version = "0.1.6"; - src = fetchurl { - url = "https://registry.npmjs.org/errno/-/errno-0.1.6.tgz"; - sha512 = "0vny3xisd56kx193rhv6vpccjxlajjn9ss5wk96l1ya8zbpkwbjrrgrm9wpfm3xc8apx8z9xb0kjkw0y5qnc6gy1hf2qsas79093hr2"; - }; - }; - "error-ex-1.3.1" = { - name = "error-ex"; - packageName = "error-ex"; - version = "1.3.1"; - src = fetchurl { - url = "https://registry.npmjs.org/error-ex/-/error-ex-1.3.1.tgz"; - sha1 = "f855a86ce61adc4e8621c3cda21e7a7612c3a8dc"; - }; - }; - "es-abstract-1.10.0" = { - name = "es-abstract"; - packageName = "es-abstract"; - version = "1.10.0"; - src = fetchurl { - url = "https://registry.npmjs.org/es-abstract/-/es-abstract-1.10.0.tgz"; - sha512 = "04nd5ylkfffc08vn5kjhz0saqh44nj19f5j3ahrrhf3zvc9da5rf6snnh63xv4gfhacjbax1jajzgqv4zpm77v806jf883a2w77zs7y"; - }; - }; - "es-to-primitive-1.1.1" = { - name = "es-to-primitive"; - packageName = "es-to-primitive"; - version = "1.1.1"; - src = fetchurl { - url = "https://registry.npmjs.org/es-to-primitive/-/es-to-primitive-1.1.1.tgz"; - sha1 = "45355248a88979034b6792e19bb81f2b7975dd0d"; - }; - }; - "es6-promise-4.2.4" = { - name = "es6-promise"; - packageName = "es6-promise"; - version = "4.2.4"; - src = fetchurl { - url = "https://registry.npmjs.org/es6-promise/-/es6-promise-4.2.4.tgz"; - sha512 = "10hlgvxhshjxlbwvm1gnf1b01sv1fmh191a97l0h5gmcs9am1b6x937wnhkvvj5fkin10qscii8pcwnp9rlnpkgnrhfdyk0a9jlvmzw"; - }; - }; - "es6-promisify-5.0.0" = { - name = "es6-promisify"; - packageName = "es6-promisify"; - version = "5.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/es6-promisify/-/es6-promisify-5.0.0.tgz"; - sha1 = "5109d62f3e56ea967c4b63505aef08291c8a5203"; - }; - }; "escape-string-regexp-1.0.5" = { name = "escape-string-regexp"; packageName = "escape-string-regexp"; @@ -2407,51 +976,6 @@ let sha1 = "1b61c0562190a8dff6ae3bb2cf0200ca130b86d4"; }; }; - "esprima-4.0.0" = { - name = "esprima"; - packageName = "esprima"; - version = "4.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/esprima/-/esprima-4.0.0.tgz"; - sha512 = "27mkhd94y9vrr8pb97br0ym5h85rawwb0biswgwdfp31x0387y12k9p9598bi4fc83fif6crfzqiqmmjs4x7gcb22ml3z1fldqm7yx1"; - }; - }; - "exclude-arr-1.0.9" = { - name = "exclude-arr"; - packageName = "exclude-arr"; - version = "1.0.9"; - src = fetchurl { - url = "https://registry.npmjs.org/exclude-arr/-/exclude-arr-1.0.9.tgz"; - sha512 = "1j9b7mbjp9g840wwzgq7jmqx66qv2xwxl3z3330891qd1a4yrm1x3jsig1g0adx6q1lj9d9f6dsb0snm564f4ff8lxhiag0k645vap7"; - }; - }; - "execa-0.7.0" = { - name = "execa"; - packageName = "execa"; - version = "0.7.0"; - src = fetchurl { - url = "https://registry.npmjs.org/execa/-/execa-0.7.0.tgz"; - sha1 = "944becd34cc41ee32a63a9faf27ad5a65fc59777"; - }; - }; - "execa-0.8.0" = { - name = "execa"; - packageName = "execa"; - version = "0.8.0"; - src = fetchurl { - url = "https://registry.npmjs.org/execa/-/execa-0.8.0.tgz"; - sha1 = "d8d76bbc1b55217ed190fd6dd49d3c774ecfc8da"; - }; - }; - "execa-0.9.0" = { - name = "execa"; - packageName = "execa"; - version = "0.9.0"; - src = fetchurl { - url = "https://registry.npmjs.org/execa/-/execa-0.9.0.tgz"; - sha512 = "2c2sw5624513vxbr2q2ay9x3qc80zfnwyr60n8cw35m1ji76yxhxv4nrk47iqd2wj1rv5l07klmncr2lfdzhfa0cn3si1pq4l30rd85"; - }; - }; "expand-brackets-0.1.5" = { name = "expand-brackets"; packageName = "expand-brackets"; @@ -2470,15 +994,6 @@ let sha1 = "a299effd335fe2721ebae8e257ec79644fc85337"; }; }; - "expand-template-1.1.0" = { - name = "expand-template"; - packageName = "expand-template"; - version = "1.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/expand-template/-/expand-template-1.1.0.tgz"; - sha512 = "34i2f4clwy5bpzgl137zwplybp5hn6ncxq0p794cx9m0crhgk31nfy0s8wp1v6hvw90h20c268r040g892dixy6zqq1xlm3ra8g0j4j"; - }; - }; "extend-3.0.1" = { name = "extend"; packageName = "extend"; @@ -2515,13 +1030,13 @@ let sha1 = "62cf120234c683785d902348a800ef3e0cc20bc0"; }; }; - "fast-deep-equal-1.0.0" = { + "fast-deep-equal-1.1.0" = { name = "fast-deep-equal"; packageName = "fast-deep-equal"; - version = "1.0.0"; + version = "1.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/fast-deep-equal/-/fast-deep-equal-1.0.0.tgz"; - sha1 = "96256a3bc975595eb36d82e9929d060d893439ff"; + url = "https://registry.npmjs.org/fast-deep-equal/-/fast-deep-equal-1.1.0.tgz"; + sha1 = "c053477817c86b51daa853c81e059b733d023614"; }; }; "fast-json-stable-stringify-2.0.0" = { @@ -2533,15 +1048,6 @@ let sha1 = "d5142c0caee6b1189f87d3a76111064f86c8bbf2"; }; }; - "fast-safe-stringify-1.1.13" = { - name = "fast-safe-stringify"; - packageName = "fast-safe-stringify"; - version = "1.1.13"; - src = fetchurl { - url = "https://registry.npmjs.org/fast-safe-stringify/-/fast-safe-stringify-1.1.13.tgz"; - sha1 = "a01e9cd9c9e491715c98a75a42d5f0bbd107ff76"; - }; - }; "fd-read-stream-1.1.0" = { name = "fd-read-stream"; packageName = "fd-read-stream"; @@ -2551,15 +1057,6 @@ let sha1 = "d303ccbfee02a9a56a3493fb08bcb59691aa53b1"; }; }; - "fetch-from-npm-registry-0.1.0" = { - name = "fetch-from-npm-registry"; - packageName = "fetch-from-npm-registry"; - version = "0.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/fetch-from-npm-registry/-/fetch-from-npm-registry-0.1.0.tgz"; - sha512 = "1264ixqa9c8kzm56hlq6y91d7rhzfkvbjy0asvj4xkdspwb5sy363n9g9frai3w415j9xyqfw8k73rcpw295gmhp790rnl5p1w0m88g"; - }; - }; "filename-regex-2.0.1" = { name = "filename-regex"; packageName = "filename-regex"; @@ -2578,33 +1075,6 @@ let sha1 = "50b77dfd7e469bc7492470963699fe7a8485a723"; }; }; - "fillo-1.0.11" = { - name = "fillo"; - packageName = "fillo"; - version = "1.0.11"; - src = fetchurl { - url = "https://registry.npmjs.org/fillo/-/fillo-1.0.11.tgz"; - sha512 = "36l602p8x6jkfpk75skz4dwjlpy9bna1zqpx7jgfjlalqbwa7b67wb8rv23cd6m5saklalf77irgvly60b5ziy611a4477idbrrr1fx"; - }; - }; - "find-packages-2.1.2" = { - name = "find-packages"; - packageName = "find-packages"; - version = "2.1.2"; - src = fetchurl { - url = "https://registry.npmjs.org/find-packages/-/find-packages-2.1.2.tgz"; - sha512 = "18j6pnfzxysg3ylhx9npp90infzxgczn174pd3mvy8mw13cshll2rzf6i9b27qfyzgq4chk7wbwy8wr1flmzlpll5g22c0ryp6dq2rh"; - }; - }; - "find-up-2.1.0" = { - name = "find-up"; - packageName = "find-up"; - version = "2.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/find-up/-/find-up-2.1.0.tgz"; - sha1 = "45d1b7e506c717ddd482775a2b77920a3c0c57a7"; - }; - }; "findup-sync-0.3.0" = { name = "findup-sync"; packageName = "findup-sync"; @@ -2614,15 +1084,6 @@ let sha1 = "37930aa5d816b777c03445e1966cc6790a4c0b16"; }; }; - "flat-colors-3.0.0" = { - name = "flat-colors"; - packageName = "flat-colors"; - version = "3.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/flat-colors/-/flat-colors-3.0.0.tgz"; - sha1 = "253ab1a23989c321f13b0acd4bf73fff4072ecb7"; - }; - }; "flat-tree-1.6.0" = { name = "flat-tree"; packageName = "flat-tree"; @@ -2632,15 +1093,6 @@ let sha1 = "fca30cddb9006fb656eb5ebc79aeb274e7fde9ed"; }; }; - "flush-write-stream-1.0.2" = { - name = "flush-write-stream"; - packageName = "flush-write-stream"; - version = "1.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/flush-write-stream/-/flush-write-stream-1.0.2.tgz"; - sha1 = "c81b90d8746766f1a609a46809946c45dd8ae417"; - }; - }; "for-each-0.3.2" = { name = "for-each"; packageName = "for-each"; @@ -2668,15 +1120,6 @@ let sha1 = "5265c681a4f294dabbf17c9509b6763aa84510ce"; }; }; - "foreach-2.0.5" = { - name = "foreach"; - packageName = "foreach"; - version = "2.0.5"; - src = fetchurl { - url = "https://registry.npmjs.org/foreach/-/foreach-2.0.5.tgz"; - sha1 = "0bee005018aeb260d0a3af3ae658dd0136ec1b99"; - }; - }; "forever-agent-0.6.1" = { name = "forever-agent"; packageName = "forever-agent"; @@ -2695,31 +1138,13 @@ let sha1 = "33c183acf193276ecaa98143a69e94bfee1750d1"; }; }; - "form-data-2.3.1" = { + "form-data-2.3.2" = { name = "form-data"; packageName = "form-data"; - version = "2.3.1"; + version = "2.3.2"; src = fetchurl { - url = "https://registry.npmjs.org/form-data/-/form-data-2.3.1.tgz"; - sha1 = "6fb94fbd71885306d73d15cc497fe4cc4ecd44bf"; - }; - }; - "formatoid-1.2.2" = { - name = "formatoid"; - packageName = "formatoid"; - version = "1.2.2"; - src = fetchurl { - url = "https://registry.npmjs.org/formatoid/-/formatoid-1.2.2.tgz"; - sha512 = "3z818q9sgzw7jky4kc4gfmx15k3hhh7lj1dy17j30vcyzmx1p14k38d0a8nvl23f2sfm4bszam36wzz8niwkznr4m992wz009ipr6yy"; - }; - }; - "from2-1.3.0" = { - name = "from2"; - packageName = "from2"; - version = "1.3.0"; - src = fetchurl { - url = "https://registry.npmjs.org/from2/-/from2-1.3.0.tgz"; - sha1 = "88413baaa5f9a597cfde9221d86986cd3c061dfd"; + url = "https://registry.npmjs.org/form-data/-/form-data-2.3.2.tgz"; + sha1 = "4970498be604c20c005d4f5c23aecd21d6b49099"; }; }; "from2-2.3.0" = { @@ -2731,24 +1156,6 @@ let sha1 = "8bfb5502bde4a4d36cfdeea007fcca21d7e382af"; }; }; - "fs-vacuum-1.2.10" = { - name = "fs-vacuum"; - packageName = "fs-vacuum"; - version = "1.2.10"; - src = fetchurl { - url = "https://registry.npmjs.org/fs-vacuum/-/fs-vacuum-1.2.10.tgz"; - sha1 = "b7629bec07a4031a2548fdf99f5ecf1cc8b31e36"; - }; - }; - "fs-write-stream-atomic-1.0.10" = { - name = "fs-write-stream-atomic"; - packageName = "fs-write-stream-atomic"; - version = "1.0.10"; - src = fetchurl { - url = "https://registry.npmjs.org/fs-write-stream-atomic/-/fs-write-stream-atomic-1.0.10.tgz"; - sha1 = "b47df53493ef911df75731e70a9ded0189db40c9"; - }; - }; "fs.realpath-1.0.0" = { name = "fs.realpath"; packageName = "fs.realpath"; @@ -2776,24 +1183,6 @@ let sha1 = "9c31dae34767018fe1d249b24dada67d092da105"; }; }; - "function-bind-1.1.1" = { - name = "function-bind"; - packageName = "function-bind"; - version = "1.1.1"; - src = fetchurl { - url = "https://registry.npmjs.org/function-bind/-/function-bind-1.1.1.tgz"; - sha512 = "38chm1mh077ksx6hy2sssfz4q29hf0ncb9k6ila7si54zqcpl5fxd1rh6wi82blqp7jcspf4aynr7jqhbsg2yc9y42xpqqp6c1jz2n8"; - }; - }; - "function.name-1.0.10" = { - name = "function.name"; - packageName = "function.name"; - version = "1.0.10"; - src = fetchurl { - url = "https://registry.npmjs.org/function.name/-/function.name-1.0.10.tgz"; - sha512 = "02zis7zxfkwajdf08z58mr0z2axddibclbk8xd849mkz7pq3y29s781fjycqigp3fdnwmy2mlvcnsg4z5hrfm44sr7gw30wx2p41x10"; - }; - }; "gauge-2.7.4" = { name = "gauge"; packageName = "gauge"; @@ -2803,87 +1192,6 @@ let sha1 = "2c03405c7538c39d7eb37b317022e325fb018bf7"; }; }; - "generate-function-1.1.0" = { - name = "generate-function"; - packageName = "generate-function"; - version = "1.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/generate-function/-/generate-function-1.1.0.tgz"; - sha1 = "54c21b080192b16d9877779c5bb81666e772365f"; - }; - }; - "generate-object-property-1.2.0" = { - name = "generate-object-property"; - packageName = "generate-object-property"; - version = "1.2.0"; - src = fetchurl { - url = "https://registry.npmjs.org/generate-object-property/-/generate-object-property-1.2.0.tgz"; - sha1 = "9c0e1c40308ce804f4783618b937fa88f99d50d0"; - }; - }; - "genfun-4.0.1" = { - name = "genfun"; - packageName = "genfun"; - version = "4.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/genfun/-/genfun-4.0.1.tgz"; - sha1 = "ed10041f2e4a7f1b0a38466d17a5c3e27df1dfc1"; - }; - }; - "get-caller-file-1.0.2" = { - name = "get-caller-file"; - packageName = "get-caller-file"; - version = "1.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/get-caller-file/-/get-caller-file-1.0.2.tgz"; - sha1 = "f702e63127e7e231c160a80c1554acb70d5047e5"; - }; - }; - "get-npm-tarball-url-2.0.1" = { - name = "get-npm-tarball-url"; - packageName = "get-npm-tarball-url"; - version = "2.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/get-npm-tarball-url/-/get-npm-tarball-url-2.0.1.tgz"; - sha512 = "051jj5v45fys9v10fpvga4wby8aq0wjydhfgynfip8bgyl7db3zkjzssqn4rv264br9b04mdc25hr9479zgqyffzdq7xxcjdi2dbsiw"; - }; - }; - "get-port-3.2.0" = { - name = "get-port"; - packageName = "get-port"; - version = "3.2.0"; - src = fetchurl { - url = "https://registry.npmjs.org/get-port/-/get-port-3.2.0.tgz"; - sha1 = "dd7ce7de187c06c8bf353796ac71e099f0980ebc"; - }; - }; - "get-source-1.0.24" = { - name = "get-source"; - packageName = "get-source"; - version = "1.0.24"; - src = fetchurl { - url = "https://registry.npmjs.org/get-source/-/get-source-1.0.24.tgz"; - sha1 = "898dcc7b5592adba02e8bb82b8d2cda60cdae5c5"; - }; - }; - "get-stream-2.3.1" = { - name = "get-stream"; - packageName = "get-stream"; - version = "2.3.1"; - src = fetchurl { - url = "https://registry.npmjs.org/get-stream/-/get-stream-2.3.1.tgz"; - sha1 = "5f38f93f346009666ee0150a054167f91bdd95de"; - }; - }; - "get-stream-3.0.0" = { - name = "get-stream"; - packageName = "get-stream"; - version = "3.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/get-stream/-/get-stream-3.0.0.tgz"; - sha1 = "8e943d1358dc37555054ecbe2edb05aa174ede14"; - }; - }; "getpass-0.1.7" = { name = "getpass"; packageName = "getpass"; @@ -2893,15 +1201,6 @@ let sha1 = "5eff8e3e684d569ae4cb2b1282604e8ba62149fa"; }; }; - "github-from-package-0.0.0" = { - name = "github-from-package"; - packageName = "github-from-package"; - version = "0.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/github-from-package/-/github-from-package-0.0.0.tgz"; - sha1 = "97fb5d96bfde8973313f20e8288ef9a167fa64ce"; - }; - }; "glob-5.0.15" = { name = "glob"; packageName = "glob"; @@ -2947,42 +1246,6 @@ let sha1 = "e76989268a6c74c38908b1305b10fc0e394e9d0f"; }; }; - "global-dirs-0.1.1" = { - name = "global-dirs"; - packageName = "global-dirs"; - version = "0.1.1"; - src = fetchurl { - url = "https://registry.npmjs.org/global-dirs/-/global-dirs-0.1.1.tgz"; - sha1 = "b319c0dd4607f353f3be9cca4c72fc148c49f445"; - }; - }; - "globby-7.1.1" = { - name = "globby"; - packageName = "globby"; - version = "7.1.1"; - src = fetchurl { - url = "https://registry.npmjs.org/globby/-/globby-7.1.1.tgz"; - sha1 = "fb2ccff9401f8600945dfada97440cca972b8680"; - }; - }; - "got-6.7.1" = { - name = "got"; - packageName = "got"; - version = "6.7.1"; - src = fetchurl { - url = "https://registry.npmjs.org/got/-/got-6.7.1.tgz"; - sha1 = "240cd05785a9a18e561dc1b44b41c763ef1e8db0"; - }; - }; - "got-8.0.3" = { - name = "got"; - packageName = "got"; - version = "8.0.3"; - src = fetchurl { - url = "https://registry.npmjs.org/got/-/got-8.0.3.tgz"; - sha512 = "2bglci1j77rvr4z2klmnr6d2qfqk0f60nm1myj9m0g2rzh7pd68hzki9nm8f5dpaxqr98ncjbd4rfzw75j35nvsfcyb2i1l9jjailak"; - }; - }; "graceful-fs-4.1.11" = { name = "graceful-fs"; packageName = "graceful-fs"; @@ -2992,15 +1255,6 @@ let sha1 = "0e8bdfe4d1ddb8854d64e04ea7c00e2a026e5658"; }; }; - "graceful-git-1.0.1" = { - name = "graceful-git"; - packageName = "graceful-git"; - version = "1.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/graceful-git/-/graceful-git-1.0.1.tgz"; - sha512 = "31ajgk1zmq4zym3ckmr9n1x6n7sidg8naa3n8d2v6p8vr67g4gl7xxij5la1dxp6c9475pbrzq5vab7psp2dbjxvwdrzrlb8xwq83xp"; - }; - }; "graceful-readlink-1.0.1" = { name = "graceful-readlink"; packageName = "graceful-readlink"; @@ -3010,15 +1264,6 @@ let sha1 = "4cafad76bc62f02fa039b2f94e9a3dd3a391a725"; }; }; - "graph-sequencer-2.0.0" = { - name = "graph-sequencer"; - packageName = "graph-sequencer"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/graph-sequencer/-/graph-sequencer-2.0.0.tgz"; - sha1 = "bfb809b8af584f6f5287cdce507a30d4aea6ee70"; - }; - }; "growl-1.10.3" = { name = "growl"; packageName = "growl"; @@ -3037,15 +1282,6 @@ let sha1 = "a4274eeb32fa765da5a7a3b1712617ce3b144149"; }; }; - "gunzip-maybe-1.4.1" = { - name = "gunzip-maybe"; - packageName = "gunzip-maybe"; - version = "1.4.1"; - src = fetchurl { - url = "https://registry.npmjs.org/gunzip-maybe/-/gunzip-maybe-1.4.1.tgz"; - sha512 = "3d6jyhcq21cxy2n6mnalnxcdxl9i00n8qka7awrqamggss8yllz57msx7c480knv037snkzkymq6npl36wlpl71h54x511dlchavnxa"; - }; - }; "har-schema-1.0.5" = { name = "har-schema"; packageName = "har-schema"; @@ -3082,33 +1318,6 @@ let sha1 = "ba402c266194f15956ef15e0fcf242993f6a7dfd"; }; }; - "has-1.0.1" = { - name = "has"; - packageName = "has"; - version = "1.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/has/-/has-1.0.1.tgz"; - sha1 = "8461733f538b0837c9361e39a9ab9e9704dc2f28"; - }; - }; - "has-ansi-2.0.0" = { - name = "has-ansi"; - packageName = "has-ansi"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/has-ansi/-/has-ansi-2.0.0.tgz"; - sha1 = "34f5049ce1ecdf2b0649af3ef24e45ed35416d91"; - }; - }; - "has-flag-1.0.0" = { - name = "has-flag"; - packageName = "has-flag"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/has-flag/-/has-flag-1.0.0.tgz"; - sha1 = "9d9e793165ce017a00f00418c43f942a7b1d11fa"; - }; - }; "has-flag-2.0.0" = { name = "has-flag"; packageName = "has-flag"; @@ -3118,22 +1327,13 @@ let sha1 = "e8207af1cc7b30d446cc70b734b5e8be18f88d51"; }; }; - "has-symbol-support-x-1.4.1" = { - name = "has-symbol-support-x"; - packageName = "has-symbol-support-x"; - version = "1.4.1"; + "has-flag-3.0.0" = { + name = "has-flag"; + packageName = "has-flag"; + version = "3.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/has-symbol-support-x/-/has-symbol-support-x-1.4.1.tgz"; - sha512 = "0qgqbqmrlx51w4ixcln9ljr5hs2jj8fvryq7i8cg9a739p7y2c5z8wpplp9jhnfn4a3xn6li2b2npmhfm2x80khm9di3vllyyv9wii6"; - }; - }; - "has-to-string-tag-x-1.4.1" = { - name = "has-to-string-tag-x"; - packageName = "has-to-string-tag-x"; - version = "1.4.1"; - src = fetchurl { - url = "https://registry.npmjs.org/has-to-string-tag-x/-/has-to-string-tag-x-1.4.1.tgz"; - sha512 = "0bqvhd628h3lrsydbp1xllh7jp23c58j7d4z0x0v9ddffindkk1zfrqmzm28z47ipjp0zxlmzvmlzk98zf9mzjsc47bmp1ydizcmmmx"; + url = "https://registry.npmjs.org/has-flag/-/has-flag-3.0.0.tgz"; + sha1 = "b5d454dc2199ae225699f3467e5a07f3b955bafd"; }; }; "has-unicode-2.0.1" = { @@ -3181,31 +1381,13 @@ let sha1 = "20bb7403d3cea398e91dc4710a8ff1b8274a25ed"; }; }; - "hoek-4.2.0" = { + "hoek-4.2.1" = { name = "hoek"; packageName = "hoek"; - version = "4.2.0"; + version = "4.2.1"; src = fetchurl { - url = "https://registry.npmjs.org/hoek/-/hoek-4.2.0.tgz"; - sha512 = "2cz0q3nnv67drgaw2rm7q57r9rgdax1qa0n4z46is7db1w8vwmh574xcr0d73xl5lg80vb85xg2gdhxzh9gbllagp7xk2q228pw4idz"; - }; - }; - "hosted-git-info-2.5.0" = { - name = "hosted-git-info"; - packageName = "hosted-git-info"; - version = "2.5.0"; - src = fetchurl { - url = "https://registry.npmjs.org/hosted-git-info/-/hosted-git-info-2.5.0.tgz"; - sha512 = "355g980qsk8k9hkv60z58llbvpscjl5yqkh4wx719s8jcq2swzn4ynzinj8azmvdgs10r22wb297rmixh9vvsml55sbysdf2i8ipn54"; - }; - }; - "http-cache-semantics-3.8.1" = { - name = "http-cache-semantics"; - packageName = "http-cache-semantics"; - version = "3.8.1"; - src = fetchurl { - url = "https://registry.npmjs.org/http-cache-semantics/-/http-cache-semantics-3.8.1.tgz"; - sha512 = "3gsj16kpvygynld5ajbvg8ii3n3bka4waamdzx30wwhz72mdr6wvffm20rfnxwzid9fq49d5g333yjq5dz1qqbnk9bwcmrj9f5bda75"; + url = "https://registry.npmjs.org/hoek/-/hoek-4.2.1.tgz"; + sha512 = "1y8kprb3qldxqj31zai5n8dvhydsl9nn5w4rskhnbzzhldn6pm6n5lcyam3sfkb61a62d5m58k8im7z6ngwbd9cw9zp4zm4y7ckrf20"; }; }; "http-methods-0.1.0" = { @@ -3217,15 +1399,6 @@ let sha1 = "29691b6fc58f4f7e81a3605dca82682b068e4430"; }; }; - "http-proxy-agent-2.0.0" = { - name = "http-proxy-agent"; - packageName = "http-proxy-agent"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/http-proxy-agent/-/http-proxy-agent-2.0.0.tgz"; - sha1 = "46482a2f0523a4d6082551709f469cb3e4a85ff4"; - }; - }; "http-signature-1.1.1" = { name = "http-signature"; packageName = "http-signature"; @@ -3244,31 +1417,13 @@ let sha1 = "9aecd925114772f3d95b65a60abb8f7c18fbace1"; }; }; - "https-proxy-agent-2.1.1" = { - name = "https-proxy-agent"; - packageName = "https-proxy-agent"; - version = "2.1.1"; - src = fetchurl { - url = "https://registry.npmjs.org/https-proxy-agent/-/https-proxy-agent-2.1.1.tgz"; - sha512 = "0rxbj60hs8fhs3i02lgb6ypcf9m9v8ybd4lfvfvpy0f1iyy54f1686lmv0rvkyxxihwvs4yizjgv8r8jksh385c4c9yjm3z8i0svbic"; - }; - }; - "humanize-ms-1.2.1" = { - name = "humanize-ms"; - packageName = "humanize-ms"; - version = "1.2.1"; - src = fetchurl { - url = "https://registry.npmjs.org/humanize-ms/-/humanize-ms-1.2.1.tgz"; - sha1 = "c46e3159a293f6b896da29316d8b6fe8bb79bbed"; - }; - }; - "hypercore-6.12.0" = { + "hypercore-6.12.2" = { name = "hypercore"; packageName = "hypercore"; - version = "6.12.0"; + version = "6.12.2"; src = fetchurl { - url = "https://registry.npmjs.org/hypercore/-/hypercore-6.12.0.tgz"; - sha512 = "00xsmbx8jcjzsibwwgknlpjvndb7zv6jdxik5skqnbizbdssvcwa2r5a7gd1cf7mpr2827067sxqqca9fmmknjnin2vvm16yb1pn5g8"; + url = "https://registry.npmjs.org/hypercore/-/hypercore-6.12.2.tgz"; + sha512 = "1s7l8r5bpiialz194g5kryp5bpcg8n0x0l7jfgynjiimi3pyn0lkcijijk20g5ibagfzi3jnrlyh1jp9ywbrys5inbwl83ra7a6qbr6"; }; }; "hypercore-protocol-6.5.2" = { @@ -3280,13 +1435,13 @@ let sha512 = "03l77nma8ga06ywa469jzqgc13hjk9bg3w2cv95g3fwnqy2fvz8qpczcih65jscvk0ira5kpm3sk2vqh2whzzvnm19jlqrzi78v80n3"; }; }; - "hyperdrive-9.12.2" = { + "hyperdrive-9.12.3" = { name = "hyperdrive"; packageName = "hyperdrive"; - version = "9.12.2"; + version = "9.12.3"; src = fetchurl { - url = "https://registry.npmjs.org/hyperdrive/-/hyperdrive-9.12.2.tgz"; - sha512 = "133iwkp8w88awfxffdjjfxl2wsrj99cdw1p2rvbv65q7mgficva14skid7vsd55r750lrvg0wbmlz0h4m44w6ypd7cvpb4hjvb2f815"; + url = "https://registry.npmjs.org/hyperdrive/-/hyperdrive-9.12.3.tgz"; + sha512 = "3w0ia766bacphqzgyjhiwbppgdja61vlz2xp6x710dk4pn6570gag3w5xa8rfivh2lvig8v2ics3bkdlm9cmq9kpzjgwzm19a089fb3"; }; }; "hyperdrive-http-4.2.2" = { @@ -3298,13 +1453,13 @@ let sha512 = "0vl2ibm38gn2xci8byg6s3qwh5zr5777hlj3l2152hm6vcfs5fn0xazxfj7vyc2wpzgacz6k1d81wcbckkvf6p6482858fh2wdxj1rn"; }; }; - "hyperdrive-network-speed-2.0.1" = { + "hyperdrive-network-speed-2.1.0" = { name = "hyperdrive-network-speed"; packageName = "hyperdrive-network-speed"; - version = "2.0.1"; + version = "2.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/hyperdrive-network-speed/-/hyperdrive-network-speed-2.0.1.tgz"; - sha1 = "40daf82e31b9d753f2ae6dfaf0818661ed24fe15"; + url = "https://registry.npmjs.org/hyperdrive-network-speed/-/hyperdrive-network-speed-2.1.0.tgz"; + sha512 = "0pvqzvgah2lm79c9gknj6cl4asrmck3f030wqagcfgbgvqh3r5q611j8s958zdw3mi0p71ny0787xqmkckxdcxrsq9am1zqgr5lz296"; }; }; "i-0.3.6" = { @@ -3316,78 +1471,6 @@ let sha1 = "d96c92732076f072711b6b10fd7d4f65ad8ee23d"; }; }; - "iconv-lite-0.4.19" = { - name = "iconv-lite"; - packageName = "iconv-lite"; - version = "0.4.19"; - src = fetchurl { - url = "https://registry.npmjs.org/iconv-lite/-/iconv-lite-0.4.19.tgz"; - sha512 = "0jj1pdq3j9ak8cixn2kjp7ip8hf3xgnb85j4jr32yf9rry620v9072c0kk577mllfk1zl9wzs5ypwzbp7vbhf7j31d5rrqgwb0nldm1"; - }; - }; - "ieee754-1.1.8" = { - name = "ieee754"; - packageName = "ieee754"; - version = "1.1.8"; - src = fetchurl { - url = "https://registry.npmjs.org/ieee754/-/ieee754-1.1.8.tgz"; - sha1 = "be33d40ac10ef1926701f6f08a2d86fbfd1ad3e4"; - }; - }; - "iferr-0.1.5" = { - name = "iferr"; - packageName = "iferr"; - version = "0.1.5"; - src = fetchurl { - url = "https://registry.npmjs.org/iferr/-/iferr-0.1.5.tgz"; - sha1 = "c60eed69e6d8fdb6b3104a1fcbca1c192dc5b501"; - }; - }; - "ignore-3.3.7" = { - name = "ignore"; - packageName = "ignore"; - version = "3.3.7"; - src = fetchurl { - url = "https://registry.npmjs.org/ignore/-/ignore-3.3.7.tgz"; - sha512 = "0f6xhxww989yic6hwdm8mbylcyakfkrrn22a39wdcc9k842xxyyhzfxkmi79s9gjk3rp3h07n265lf4n51z8yafpdm78d617dxbfqb0"; - }; - }; - "ignore-walk-3.0.1" = { - name = "ignore-walk"; - packageName = "ignore-walk"; - version = "3.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/ignore-walk/-/ignore-walk-3.0.1.tgz"; - sha512 = "2ajgs5klg786rkdxs37mbxn0p8ah2ai0nj0bjv5vbrfir4y0pvrhxxadv46s8g1hqkq5p3fjssys3n6qvz60p4jzjsgfq683lrnad8d"; - }; - }; - "import-lazy-2.1.0" = { - name = "import-lazy"; - packageName = "import-lazy"; - version = "2.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/import-lazy/-/import-lazy-2.1.0.tgz"; - sha1 = "05698e3d45c88e8d7e9d92cb0584e77f096f3e43"; - }; - }; - "imurmurhash-0.1.4" = { - name = "imurmurhash"; - packageName = "imurmurhash"; - version = "0.1.4"; - src = fetchurl { - url = "https://registry.npmjs.org/imurmurhash/-/imurmurhash-0.1.4.tgz"; - sha1 = "9218b9b2b928a238b13dc4fb6b6d576f231453ea"; - }; - }; - "individual-3.0.0" = { - name = "individual"; - packageName = "individual"; - version = "3.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/individual/-/individual-3.0.0.tgz"; - sha1 = "e7ca4f85f8957b018734f285750dc22ec2f9862d"; - }; - }; "inflight-1.0.6" = { name = "inflight"; packageName = "inflight"; @@ -3415,42 +1498,6 @@ let sha512 = "1rjbvf1rg5ywhnba08sgagn2qf23lab330qrqmh7d891zap3xpxcyfyj1cblpf0f0rypglcfacybzyrpd4996aa1mbc820awa33k5j5"; }; }; - "init-package-json-1.10.1" = { - name = "init-package-json"; - packageName = "init-package-json"; - version = "1.10.1"; - src = fetchurl { - url = "https://registry.npmjs.org/init-package-json/-/init-package-json-1.10.1.tgz"; - sha1 = "cd873a167796befb99612b28762a0b6393fd8f6a"; - }; - }; - "into-stream-2.0.1" = { - name = "into-stream"; - packageName = "into-stream"; - version = "2.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/into-stream/-/into-stream-2.0.1.tgz"; - sha1 = "db9b003694453eae091d8a5c84cc11507b781d31"; - }; - }; - "into-stream-3.1.0" = { - name = "into-stream"; - packageName = "into-stream"; - version = "3.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/into-stream/-/into-stream-3.1.0.tgz"; - sha1 = "96fb0a936c12babd6ff1752a17d05616abd094c6"; - }; - }; - "invert-kv-1.0.0" = { - name = "invert-kv"; - packageName = "invert-kv"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/invert-kv/-/invert-kv-1.0.0.tgz"; - sha1 = "104a8e4aaca6d3d8cd157a8ef8bfab2d7a3ffdb6"; - }; - }; "ip-1.1.5" = { name = "ip"; packageName = "ip"; @@ -3460,15 +1507,6 @@ let sha1 = "bdded70114290828c0a039e72ef25f5aaec4354a"; }; }; - "is-arrayish-0.2.1" = { - name = "is-arrayish"; - packageName = "is-arrayish"; - version = "0.2.1"; - src = fetchurl { - url = "https://registry.npmjs.org/is-arrayish/-/is-arrayish-0.2.1.tgz"; - sha1 = "77c99840527aa8ecb1a8ba697b80645a7a926a9d"; - }; - }; "is-buffer-1.1.6" = { name = "is-buffer"; packageName = "is-buffer"; @@ -3478,69 +1516,6 @@ let sha512 = "3kr8dm9qyklmm2xyiz75s8db90bfilfals4x0g276kncihrrrz0ar4y6dqpvc7pwy7h43jay1bayi1r62x97nzvcswkk4ap18pl1irm"; }; }; - "is-builtin-module-1.0.0" = { - name = "is-builtin-module"; - packageName = "is-builtin-module"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/is-builtin-module/-/is-builtin-module-1.0.0.tgz"; - sha1 = "540572d34f7ac3119f8f76c30cbc1b1e037affbe"; - }; - }; - "is-bzip2-1.0.0" = { - name = "is-bzip2"; - packageName = "is-bzip2"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/is-bzip2/-/is-bzip2-1.0.0.tgz"; - sha1 = "5ee58eaa5a2e9c80e21407bedf23ae5ac091b3fc"; - }; - }; - "is-callable-1.1.3" = { - name = "is-callable"; - packageName = "is-callable"; - version = "1.1.3"; - src = fetchurl { - url = "https://registry.npmjs.org/is-callable/-/is-callable-1.1.3.tgz"; - sha1 = "86eb75392805ddc33af71c92a0eedf74ee7604b2"; - }; - }; - "is-ci-1.1.0" = { - name = "is-ci"; - packageName = "is-ci"; - version = "1.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/is-ci/-/is-ci-1.1.0.tgz"; - sha512 = "0m66alrh568wj40xwshf8q99gsjfk1jr0czp4jc2sm519wfzzzprkl5zjvw2r5h49p72d50ywj9qg67dnyazq0ijy4flgny2b1ygd3k"; - }; - }; - "is-cidr-1.0.0" = { - name = "is-cidr"; - packageName = "is-cidr"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/is-cidr/-/is-cidr-1.0.0.tgz"; - sha1 = "fb5aacf659255310359da32cae03e40c6a1c2afc"; - }; - }; - "is-date-object-1.0.1" = { - name = "is-date-object"; - packageName = "is-date-object"; - version = "1.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/is-date-object/-/is-date-object-1.0.1.tgz"; - sha1 = "9aa20eb6aeebbff77fbd33e74ca01b33581d3a16"; - }; - }; - "is-deflate-1.0.0" = { - name = "is-deflate"; - packageName = "is-deflate"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/is-deflate/-/is-deflate-1.0.0.tgz"; - sha1 = "c862901c3c161fb09dac7cdc7e784f80e98f2f14"; - }; - }; "is-dotfile-1.0.3" = { name = "is-dotfile"; packageName = "is-dotfile"; @@ -3613,42 +1588,6 @@ let sha1 = "d096f926a3ded5600f3fdfd91198cb0888c2d863"; }; }; - "is-gzip-1.0.0" = { - name = "is-gzip"; - packageName = "is-gzip"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/is-gzip/-/is-gzip-1.0.0.tgz"; - sha1 = "6ca8b07b99c77998025900e555ced8ed80879a83"; - }; - }; - "is-inner-link-2.0.2" = { - name = "is-inner-link"; - packageName = "is-inner-link"; - version = "2.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/is-inner-link/-/is-inner-link-2.0.2.tgz"; - sha512 = "2xbj75av7s092kdl27ic28ckwnfnxvl4wr3x879djhamp0waw1js8c0zrakfnbjbsp5vh087brimykngrg319zfzhgwjvni994m2bv1"; - }; - }; - "is-installed-globally-0.1.0" = { - name = "is-installed-globally"; - packageName = "is-installed-globally"; - version = "0.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/is-installed-globally/-/is-installed-globally-0.1.0.tgz"; - sha1 = "0dfd98f5a9111716dd535dda6492f67bf3d25a80"; - }; - }; - "is-npm-1.0.0" = { - name = "is-npm"; - packageName = "is-npm"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/is-npm/-/is-npm-1.0.0.tgz"; - sha1 = "f2fb63a65e4905b406c86072765a1a4dc793b9f4"; - }; - }; "is-number-2.1.0" = { name = "is-number"; packageName = "is-number"; @@ -3667,42 +1606,6 @@ let sha1 = "24fd6201a4782cf50561c810276afc7d12d71195"; }; }; - "is-obj-1.0.1" = { - name = "is-obj"; - packageName = "is-obj"; - version = "1.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/is-obj/-/is-obj-1.0.1.tgz"; - sha1 = "3e4729ac1f5fde025cd7d83a896dab9f4f67db0f"; - }; - }; - "is-object-1.0.1" = { - name = "is-object"; - packageName = "is-object"; - version = "1.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/is-object/-/is-object-1.0.1.tgz"; - sha1 = "8952688c5ec2ffd6b03ecc85e769e02903083470"; - }; - }; - "is-path-inside-1.0.1" = { - name = "is-path-inside"; - packageName = "is-path-inside"; - version = "1.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/is-path-inside/-/is-path-inside-1.0.1.tgz"; - sha1 = "8ef5b7de50437a3fdca6b4e865ef7aa55cb48036"; - }; - }; - "is-plain-obj-1.1.0" = { - name = "is-plain-obj"; - packageName = "is-plain-obj"; - version = "1.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/is-plain-obj/-/is-plain-obj-1.1.0.tgz"; - sha1 = "71a50c8429dfca773c92a390a4a03b39fcd51d3e"; - }; - }; "is-posix-bracket-0.1.1" = { name = "is-posix-bracket"; packageName = "is-posix-bracket"; @@ -3721,60 +1624,6 @@ let sha1 = "207bab91638499c07b2adf240a41a87210034575"; }; }; - "is-property-1.0.2" = { - name = "is-property"; - packageName = "is-property"; - version = "1.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/is-property/-/is-property-1.0.2.tgz"; - sha1 = "57fe1c4e48474edd65b09911f26b1cd4095dda84"; - }; - }; - "is-redirect-1.0.0" = { - name = "is-redirect"; - packageName = "is-redirect"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/is-redirect/-/is-redirect-1.0.0.tgz"; - sha1 = "1d03dded53bd8db0f30c26e4f95d36fc7c87dc24"; - }; - }; - "is-regex-1.0.4" = { - name = "is-regex"; - packageName = "is-regex"; - version = "1.0.4"; - src = fetchurl { - url = "https://registry.npmjs.org/is-regex/-/is-regex-1.0.4.tgz"; - sha1 = "5517489b547091b0930e095654ced25ee97e9491"; - }; - }; - "is-retry-allowed-1.1.0" = { - name = "is-retry-allowed"; - packageName = "is-retry-allowed"; - version = "1.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/is-retry-allowed/-/is-retry-allowed-1.1.0.tgz"; - sha1 = "11a060568b67339444033d0125a61a20d564fb34"; - }; - }; - "is-ssh-1.3.0" = { - name = "is-ssh"; - packageName = "is-ssh"; - version = "1.3.0"; - src = fetchurl { - url = "https://registry.npmjs.org/is-ssh/-/is-ssh-1.3.0.tgz"; - sha1 = "ebea1169a2614da392a63740366c3ce049d8dff6"; - }; - }; - "is-stream-1.1.0" = { - name = "is-stream"; - packageName = "is-stream"; - version = "1.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/is-stream/-/is-stream-1.1.0.tgz"; - sha1 = "12d4a3dd4e68e0b79ceb8dbc84173ae80d91ca44"; - }; - }; "is-string-1.0.4" = { name = "is-string"; packageName = "is-string"; @@ -3784,24 +1633,6 @@ let sha1 = "cc3a9b69857d621e963725a24caeec873b826e64"; }; }; - "is-subdir-1.0.2" = { - name = "is-subdir"; - packageName = "is-subdir"; - version = "1.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/is-subdir/-/is-subdir-1.0.2.tgz"; - sha512 = "2czdnl66p1ls8xjwh0vx5ydk118b9m1zhnc4khf16v7bh9n8nwjhafr4aigvd6kj2igl0ylbzznc181pf0ppxm4bgiv9kwyvlryyzfq"; - }; - }; - "is-symbol-1.0.1" = { - name = "is-symbol"; - packageName = "is-symbol"; - version = "1.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/is-symbol/-/is-symbol-1.0.1.tgz"; - sha1 = "3cc59f00025194b6ab2e38dbae6689256b660572"; - }; - }; "is-typedarray-1.0.0" = { name = "is-typedarray"; packageName = "is-typedarray"; @@ -3811,24 +1642,6 @@ let sha1 = "e479c80858df0c1b11ddda6940f96011fcda4a9a"; }; }; - "is-windows-1.0.1" = { - name = "is-windows"; - packageName = "is-windows"; - version = "1.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/is-windows/-/is-windows-1.0.1.tgz"; - sha1 = "310db70f742d259a16a369202b51af84233310d9"; - }; - }; - "isarray-0.0.1" = { - name = "isarray"; - packageName = "isarray"; - version = "0.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/isarray/-/isarray-0.0.1.tgz"; - sha1 = "8a18acfca9a8f4177e09abfc6038939b05d1eedf"; - }; - }; "isarray-1.0.0" = { name = "isarray"; packageName = "isarray"; @@ -3865,24 +1678,6 @@ let sha1 = "47e63f7af55afa6f92e1500e690eb8b8529c099a"; }; }; - "isurl-1.0.0" = { - name = "isurl"; - packageName = "isurl"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/isurl/-/isurl-1.0.0.tgz"; - sha512 = "3vs53bpdrwiwwcql2xs20jmd8qha27k4iypdhr0b3isgdaj18vz80nhxwvvqxk6y3x5vj3slchxl0r91gjhz487xmkkp52gridg5zyl"; - }; - }; - "iterate-object-1.3.2" = { - name = "iterate-object"; - packageName = "iterate-object"; - version = "1.3.2"; - src = fetchurl { - url = "https://registry.npmjs.org/iterate-object/-/iterate-object-1.3.2.tgz"; - sha1 = "24ec15affa5d0039e8839695a21c2cae1f45b66b"; - }; - }; "iterators-0.1.0" = { name = "iterators"; packageName = "iterators"; @@ -3892,15 +1687,6 @@ let sha1 = "d03f666ca4e6130138565997cacea54164203156"; }; }; - "js-yaml-3.10.0" = { - name = "js-yaml"; - packageName = "js-yaml"; - version = "3.10.0"; - src = fetchurl { - url = "https://registry.npmjs.org/js-yaml/-/js-yaml-3.10.0.tgz"; - sha512 = "0h26sq1bwxc45bm0hvlcadrbk4bizzaw729wvw690ya7mpys45bqfzdqwhjkdrnq0i44dzxckykz4bix22jfdyfg1asybg3yzczjsrv"; - }; - }; "jsbn-0.1.1" = { name = "jsbn"; packageName = "jsbn"; @@ -3910,24 +1696,6 @@ let sha1 = "a5e654c2e5a2deb5f201d96cefbca80c0ef2f513"; }; }; - "json-buffer-3.0.0" = { - name = "json-buffer"; - packageName = "json-buffer"; - version = "3.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/json-buffer/-/json-buffer-3.0.0.tgz"; - sha1 = "5b1f397afc75d677bde8bcfc0e47e1f9a3d9a898"; - }; - }; - "json-parse-better-errors-1.0.1" = { - name = "json-parse-better-errors"; - packageName = "json-parse-better-errors"; - version = "1.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/json-parse-better-errors/-/json-parse-better-errors-1.0.1.tgz"; - sha512 = "05ndp7b03ikx2vqivfxlm6c73yagjyrdp22ay8z592pqxldbsm7hjzpa3asal2vys99lvirqar3ly3sb1ibhhngls4sqc4nwp2jj967"; - }; - }; "json-schema-0.2.3" = { name = "json-schema"; packageName = "json-schema"; @@ -3964,15 +1732,6 @@ let sha1 = "1296a2d58fd45f19a0f6ce01d65701e2c735b6eb"; }; }; - "json2yaml-1.1.0" = { - name = "json2yaml"; - packageName = "json2yaml"; - version = "1.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/json2yaml/-/json2yaml-1.1.0.tgz"; - sha1 = "5414d907f9816586b80c513ec2e3aeb2ab819a6c"; - }; - }; "jsonify-0.0.0" = { name = "jsonify"; packageName = "jsonify"; @@ -3982,15 +1741,6 @@ let sha1 = "2c74b6ee41d93ca51b7b5aaee8f503631d252a73"; }; }; - "jsonparse-1.3.1" = { - name = "jsonparse"; - packageName = "jsonparse"; - version = "1.3.1"; - src = fetchurl { - url = "https://registry.npmjs.org/jsonparse/-/jsonparse-1.3.1.tgz"; - sha1 = "3f4dae4a91fac315f71062f8521cc239f1366280"; - }; - }; "jsprim-1.4.1" = { name = "jsprim"; packageName = "jsprim"; @@ -4027,15 +1777,6 @@ let sha512 = "02w1ih1lh86i5ap7c3dy2ml7g5a11r0w300iyxdf6v02qr0j1x3vf78hx5q9dgg3drifab018mgm851m457zzzi05i2z2r1s3zlflc3"; }; }; - "keyv-3.0.0" = { - name = "keyv"; - packageName = "keyv"; - version = "3.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/keyv/-/keyv-3.0.0.tgz"; - sha512 = "32ga97c763vprf4sjbb2f7gbngfppq9n1hy4cpq2h4yb1msrhh2zjimxib7p09mzgynm6askbigxlsqsm11p644avp4sf5nmng8f2vs"; - }; - }; "kind-of-3.2.2" = { name = "kind-of"; packageName = "kind-of"; @@ -4063,42 +1804,6 @@ let sha1 = "c1bfd0cbcb46790ec9156b8d1aee8fcb86cda22a"; }; }; - "latest-version-3.1.0" = { - name = "latest-version"; - packageName = "latest-version"; - version = "3.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/latest-version/-/latest-version-3.1.0.tgz"; - sha1 = "a205383fea322b33b5ae3b18abee0dc2f356ee15"; - }; - }; - "lazy-property-1.0.0" = { - name = "lazy-property"; - packageName = "lazy-property"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/lazy-property/-/lazy-property-1.0.0.tgz"; - sha1 = "84ddc4b370679ba8bd4cdcfa4c06b43d57111147"; - }; - }; - "lcid-1.0.0" = { - name = "lcid"; - packageName = "lcid"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/lcid/-/lcid-1.0.0.tgz"; - sha1 = "308accafa0bc483a3867b4b6f2b9506251d1b835"; - }; - }; - "le-table-4.0.0" = { - name = "le-table"; - packageName = "le-table"; - version = "4.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/le-table/-/le-table-4.0.0.tgz"; - sha1 = "3bfeb72d24cbfc37752f01539f9006d711d9be93"; - }; - }; "length-prefixed-message-3.0.3" = { name = "length-prefixed-message"; packageName = "length-prefixed-message"; @@ -4108,112 +1813,13 @@ let sha1 = "245474d69abc0614dca368dc35aa8074982a23ac"; }; }; - "libnpx-9.6.0" = { - name = "libnpx"; - packageName = "libnpx"; - version = "9.6.0"; - src = fetchurl { - url = "https://registry.npmjs.org/libnpx/-/libnpx-9.6.0.tgz"; - sha512 = "28v6bsd92dcqj92yr2bk9r29ajwbqx46fd46mriva2934nr7s6hhkxy6f7xbf4nd7p93fxsbpzfx0ghq0y788x1zj8gnh1iswgd89sz"; - }; - }; - "load-json-file-2.0.0" = { - name = "load-json-file"; - packageName = "load-json-file"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/load-json-file/-/load-json-file-2.0.0.tgz"; - sha1 = "7947e42149af80d696cbf797bcaabcfe1fe29ca8"; - }; - }; - "load-json-file-4.0.0" = { - name = "load-json-file"; - packageName = "load-json-file"; - version = "4.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/load-json-file/-/load-json-file-4.0.0.tgz"; - sha1 = "2f5f45ab91e33216234fd53adab668eb4ec0993b"; - }; - }; - "load-yaml-file-0.1.0" = { - name = "load-yaml-file"; - packageName = "load-yaml-file"; - version = "0.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/load-yaml-file/-/load-yaml-file-0.1.0.tgz"; - sha1 = "f680066e691b3eeb45017672e4a3956af5b83b89"; - }; - }; - "locate-path-2.0.0" = { - name = "locate-path"; - packageName = "locate-path"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/locate-path/-/locate-path-2.0.0.tgz"; - sha1 = "2b568b265eec944c6d9c0de9c3dbbbca0354cd8e"; - }; - }; - "lockfile-1.0.3" = { - name = "lockfile"; - packageName = "lockfile"; - version = "1.0.3"; - src = fetchurl { - url = "https://registry.npmjs.org/lockfile/-/lockfile-1.0.3.tgz"; - sha1 = "2638fc39a0331e9cac1a04b71799931c9c50df79"; - }; - }; - "lodash-3.10.1" = { + "lodash-4.17.5" = { name = "lodash"; packageName = "lodash"; - version = "3.10.1"; + version = "4.17.5"; src = fetchurl { - url = "https://registry.npmjs.org/lodash/-/lodash-3.10.1.tgz"; - sha1 = "5bf45e8e49ba4189e17d482789dfd15bd140b7b6"; - }; - }; - "lodash-4.17.4" = { - name = "lodash"; - packageName = "lodash"; - version = "4.17.4"; - src = fetchurl { - url = "https://registry.npmjs.org/lodash/-/lodash-4.17.4.tgz"; - sha1 = "78203a4d1c328ae1d86dca6460e369b57f4055ae"; - }; - }; - "lodash._baseuniq-4.6.0" = { - name = "lodash._baseuniq"; - packageName = "lodash._baseuniq"; - version = "4.6.0"; - src = fetchurl { - url = "https://registry.npmjs.org/lodash._baseuniq/-/lodash._baseuniq-4.6.0.tgz"; - sha1 = "0ebb44e456814af7905c6212fa2c9b2d51b841e8"; - }; - }; - "lodash._createset-4.0.3" = { - name = "lodash._createset"; - packageName = "lodash._createset"; - version = "4.0.3"; - src = fetchurl { - url = "https://registry.npmjs.org/lodash._createset/-/lodash._createset-4.0.3.tgz"; - sha1 = "0f4659fbb09d75194fa9e2b88a6644d363c9fe26"; - }; - }; - "lodash._root-3.0.1" = { - name = "lodash._root"; - packageName = "lodash._root"; - version = "3.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/lodash._root/-/lodash._root-3.0.1.tgz"; - sha1 = "fba1c4524c19ee9a5f8136b4609f017cf4ded692"; - }; - }; - "lodash.clonedeep-4.5.0" = { - name = "lodash.clonedeep"; - packageName = "lodash.clonedeep"; - version = "4.5.0"; - src = fetchurl { - url = "https://registry.npmjs.org/lodash.clonedeep/-/lodash.clonedeep-4.5.0.tgz"; - sha1 = "e23f3f9c4f8fbdde872529c1071857a086e5ccef"; + url = "https://registry.npmjs.org/lodash/-/lodash-4.17.5.tgz"; + sha512 = "11hikgyas884mz8a58vyixaahxbpdwljdw4cb6qp15xa3sfqikp2mm6wgv41jsl34nzsv1hkx9kw3nwczvas5p73whirmaz4sxggwmj"; }; }; "lodash.flattendeep-4.4.0" = { @@ -4234,60 +1840,6 @@ let sha1 = "c23e91b710242ac70c37f1e1cda9274cc39bf2f4"; }; }; - "lodash.union-4.6.0" = { - name = "lodash.union"; - packageName = "lodash.union"; - version = "4.6.0"; - src = fetchurl { - url = "https://registry.npmjs.org/lodash.union/-/lodash.union-4.6.0.tgz"; - sha1 = "48bb5088409f16f1821666641c44dd1aaae3cd88"; - }; - }; - "lodash.uniq-4.5.0" = { - name = "lodash.uniq"; - packageName = "lodash.uniq"; - version = "4.5.0"; - src = fetchurl { - url = "https://registry.npmjs.org/lodash.uniq/-/lodash.uniq-4.5.0.tgz"; - sha1 = "d0225373aeb652adc1bc82e4945339a842754773"; - }; - }; - "lodash.without-4.4.0" = { - name = "lodash.without"; - packageName = "lodash.without"; - version = "4.4.0"; - src = fetchurl { - url = "https://registry.npmjs.org/lodash.without/-/lodash.without-4.4.0.tgz"; - sha1 = "3cd4574a00b67bae373a94b748772640507b7aac"; - }; - }; - "log-update-2.3.0" = { - name = "log-update"; - packageName = "log-update"; - version = "2.3.0"; - src = fetchurl { - url = "https://registry.npmjs.org/log-update/-/log-update-2.3.0.tgz"; - sha1 = "88328fd7d1ce7938b29283746f0b1bc126b24708"; - }; - }; - "loud-rejection-1.6.0" = { - name = "loud-rejection"; - packageName = "loud-rejection"; - version = "1.6.0"; - src = fetchurl { - url = "https://registry.npmjs.org/loud-rejection/-/loud-rejection-1.6.0.tgz"; - sha1 = "5b46f80147edee578870f086d04821cf998e551f"; - }; - }; - "lowercase-keys-1.0.0" = { - name = "lowercase-keys"; - packageName = "lowercase-keys"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/lowercase-keys/-/lowercase-keys-1.0.0.tgz"; - sha1 = "4e3366b39e7f5457e35f1324bdf6f88d0bfc7306"; - }; - }; "lru-2.0.1" = { name = "lru"; packageName = "lru"; @@ -4306,60 +1858,6 @@ let sha1 = "ea7fb8546d83733396a13091d76cfeb4c06837d5"; }; }; - "lru-cache-4.1.1" = { - name = "lru-cache"; - packageName = "lru-cache"; - version = "4.1.1"; - src = fetchurl { - url = "https://registry.npmjs.org/lru-cache/-/lru-cache-4.1.1.tgz"; - sha512 = "1xz91sizgyzh8plz5jx1labzpygapm6xy3qpxriaj00yvnhy4lnmhqcb20qln4lh80c5g3yzp4j5i6g63njq1r5sl9c0zlkh9xjk2xb"; - }; - }; - "make-dir-1.1.0" = { - name = "make-dir"; - packageName = "make-dir"; - version = "1.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/make-dir/-/make-dir-1.1.0.tgz"; - sha512 = "1q7686aqgkxk9l6nqhzbil3599f9pxiz364kdbfy7pdr9sny7zylpm6yf4rwz4i0aa11lmf35mh8jmj7g7vxm37pvqvl9qbij5jxyfh"; - }; - }; - "make-fetch-happen-2.6.0" = { - name = "make-fetch-happen"; - packageName = "make-fetch-happen"; - version = "2.6.0"; - src = fetchurl { - url = "https://registry.npmjs.org/make-fetch-happen/-/make-fetch-happen-2.6.0.tgz"; - sha512 = "1kmyri7r2lpf3fjzwbbdramk86mhplv53x5pl535frn1vryq9xl7hmzkb3awxw6c31n19w0i20mv0h3zj8mmcw5yjkiysrlsaab8nhl"; - }; - }; - "meant-1.0.1" = { - name = "meant"; - packageName = "meant"; - version = "1.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/meant/-/meant-1.0.1.tgz"; - sha512 = "2b6yi25bkxg4hd38w2cpfjy0xyka4iqiyzhsnkklx3nxwbgnzr4hfl07xxpflccjvnb03zvnssw0y9fspxdk2fmq3abd4fab0n1baai"; - }; - }; - "mem-1.1.0" = { - name = "mem"; - packageName = "mem"; - version = "1.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/mem/-/mem-1.1.0.tgz"; - sha1 = "5edd52b485ca1d900fe64895505399a0dfa45f76"; - }; - }; - "mem-3.0.0" = { - name = "mem"; - packageName = "mem"; - version = "3.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/mem/-/mem-3.0.0.tgz"; - sha1 = "84e58ad4dfbdf5d105b26b6548a398b2b3aa8a21"; - }; - }; "memory-pager-1.1.0" = { name = "memory-pager"; packageName = "memory-pager"; @@ -4396,40 +1894,22 @@ let sha512 = "1x901mk5cdib4xp27v4ivwwr7mhy64r4rk953bzivi5p9lf2bhw88ra2rhkd254xkdx2d3q30zkq239vc4yx4pfsj4hpys8rbr6fif7"; }; }; - "mime-db-1.30.0" = { + "mime-db-1.33.0" = { name = "mime-db"; packageName = "mime-db"; - version = "1.30.0"; + version = "1.33.0"; src = fetchurl { - url = "https://registry.npmjs.org/mime-db/-/mime-db-1.30.0.tgz"; - sha1 = "74c643da2dd9d6a45399963465b26d5ca7d71f01"; + url = "https://registry.npmjs.org/mime-db/-/mime-db-1.33.0.tgz"; + sha512 = "36xnw59ik9fqym00cmwb5nyzg0l03k70cp413f7639j93wgmzk1mh0xjc7i6zz3r6k9xnwh0g5cm5a1f3y8c6plgy4qld7fm887ywh4"; }; }; - "mime-types-2.1.17" = { + "mime-types-2.1.18" = { name = "mime-types"; packageName = "mime-types"; - version = "2.1.17"; + version = "2.1.18"; src = fetchurl { - url = "https://registry.npmjs.org/mime-types/-/mime-types-2.1.17.tgz"; - sha1 = "09d7a393f03e995a79f8af857b70a9e0ab16557a"; - }; - }; - "mimic-fn-1.1.0" = { - name = "mimic-fn"; - packageName = "mimic-fn"; - version = "1.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/mimic-fn/-/mimic-fn-1.1.0.tgz"; - sha1 = "e667783d92e89dbd342818b5230b9d62a672ad18"; - }; - }; - "mimic-response-1.0.0" = { - name = "mimic-response"; - packageName = "mimic-response"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/mimic-response/-/mimic-response-1.0.0.tgz"; - sha1 = "df3d3652a73fded6b9b0b24146e6fd052353458e"; + url = "https://registry.npmjs.org/mime-types/-/mime-types-2.1.18.tgz"; + sha512 = "22krj1kw7n9z10zdyx7smcaim4bzwqsqzhspwha06q58gcrxfp93hw2cd0vk5crhq5p2dwzqlpacg32lrmp5sjzb798zdzy35mdmkwm"; }; }; "min-document-2.19.0" = { @@ -4468,24 +1948,6 @@ let sha1 = "a35008b20f41383eec1fb914f4cd5df79a264284"; }; }; - "minipass-2.2.1" = { - name = "minipass"; - packageName = "minipass"; - version = "2.2.1"; - src = fetchurl { - url = "https://registry.npmjs.org/minipass/-/minipass-2.2.1.tgz"; - sha512 = "3yy9s65iwrx5hndcqbxrks88xi9cf8hra6zalgf8xfr4ahpp31s0i8lv6jpyb42p0y7z55ac3390sbqxcgcvan3xls449agbjb98mmv"; - }; - }; - "minizlib-1.1.0" = { - name = "minizlib"; - packageName = "minizlib"; - version = "1.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/minizlib/-/minizlib-1.1.0.tgz"; - sha512 = "2agpbdf9h90nhafdam3jwrw8gcz3jw1i40cx6bhwaw8qaf2s863gi2b77l73dc3hmf5dx491hv5km1rqzabgsbpkjxrvdcwy6pr8gp1"; - }; - }; "mirror-folder-2.1.1" = { name = "mirror-folder"; packageName = "mirror-folder"; @@ -4495,15 +1957,6 @@ let sha1 = "1ad3b777b39e403cc27bf52086c23e41ef4c9604"; }; }; - "mississippi-1.3.1" = { - name = "mississippi"; - packageName = "mississippi"; - version = "1.3.1"; - src = fetchurl { - url = "https://registry.npmjs.org/mississippi/-/mississippi-1.3.1.tgz"; - sha512 = "2vfagk7xiqrqmyp78yz1cpnjsaibgix7q22cgxggwzf5kqr7y1p21dbi67vcvsvip1g2s6mrvskw7d8a2288sala5n0nv65hpqw3apz"; - }; - }; "mkdirp-0.5.1" = { name = "mkdirp"; packageName = "mkdirp"; @@ -4513,51 +1966,6 @@ let sha1 = "30057438eac6cf7f8c4767f38648d6697d75c903"; }; }; - "mkdirp-promise-5.0.1" = { - name = "mkdirp-promise"; - packageName = "mkdirp-promise"; - version = "5.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/mkdirp-promise/-/mkdirp-promise-5.0.1.tgz"; - sha1 = "e9b8f68e552c68a9c1713b84883f7a1dd039b8a1"; - }; - }; - "months-1.2.0" = { - name = "months"; - packageName = "months"; - version = "1.2.0"; - src = fetchurl { - url = "https://registry.npmjs.org/months/-/months-1.2.0.tgz"; - sha512 = "0wl48vfgi3c46vwy8cfa0j4z65rbar2j8cwgns9jcgi3cc3n79fm7yjg6wlbd90y3jhhfj03i2xs0as0sv3kkb0jc32d2bk9a2knlyc"; - }; - }; - "most-1.7.2" = { - name = "most"; - packageName = "most"; - version = "1.7.2"; - src = fetchurl { - url = "https://registry.npmjs.org/most/-/most-1.7.2.tgz"; - sha512 = "1jxsiagsdkjmd2h0ys7kkc34rw79bswfdlyijd2fv434d0sxk8i8j055fhmpfs4ca1j9wgi6pj9k4b2cyq7di528vykwgf7mr8v6d4c"; - }; - }; - "most-last-1.0.0" = { - name = "most-last"; - packageName = "most-last"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/most-last/-/most-last-1.0.0.tgz"; - sha1 = "4e3f0b289c24cf90b9d8384676de90a26e376171"; - }; - }; - "move-concurrently-1.0.1" = { - name = "move-concurrently"; - packageName = "move-concurrently"; - version = "1.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/move-concurrently/-/move-concurrently-1.0.1.tgz"; - sha1 = "be2c005fda32e0b29af1f05d7c4b33214c701f92"; - }; - }; "ms-2.0.0" = { name = "ms"; packageName = "ms"; @@ -4567,15 +1975,6 @@ let sha1 = "5608aeadfc00be6c2901df5f9861788de0d597c8"; }; }; - "ms-2.1.1" = { - name = "ms"; - packageName = "ms"; - version = "2.1.1"; - src = fetchurl { - url = "https://registry.npmjs.org/ms/-/ms-2.1.1.tgz"; - sha512 = "352z145jr1zx0w6kmlz2jxcaw6j2pwwg9va3x4gk731zw1agka2b213avw12zx6hgn071ibm0f3p80n5cdv896npay4s6jwbrv7w2mn"; - }; - }; "multi-random-access-2.1.1" = { name = "multi-random-access"; packageName = "multi-random-access"; @@ -4585,13 +1984,13 @@ let sha1 = "6462f1b204109ccc644601650110a828443d66e2"; }; }; - "multicast-dns-6.2.2" = { + "multicast-dns-6.2.3" = { name = "multicast-dns"; packageName = "multicast-dns"; - version = "6.2.2"; + version = "6.2.3"; src = fetchurl { - url = "https://registry.npmjs.org/multicast-dns/-/multicast-dns-6.2.2.tgz"; - sha512 = "06b9ps5a1ymag21szz55z4xzs2ncp0frcqsaldnggmz0m5ijhjv8f553cpkp9zkm37av1pm2y8pn70jbfzk888n1hap6i321babhcy5"; + url = "https://registry.npmjs.org/multicast-dns/-/multicast-dns-6.2.3.tgz"; + sha512 = "3m42kr8y2s1krl4gzb5xsa9v3h01xalvrgdkj99gyfaq7761asmj5m6kzm70mxb22125gia12g7rmarnzmh09403j8j2cyvx7jqjblf"; }; }; "multicb-1.2.2" = { @@ -4621,22 +2020,13 @@ let sha512 = "2hha5ly9j3v9pqpfvkbq8spn9sz7qz5bv8p303zmdisskhcn6i7ia5dviv8xhs3xlwi9562i4r4rm6mkk5gg0abm34zm1dkvp2z76m2"; }; }; - "mz-2.7.0" = { - name = "mz"; - packageName = "mz"; - version = "2.7.0"; - src = fetchurl { - url = "https://registry.npmjs.org/mz/-/mz-2.7.0.tgz"; - sha512 = "3cpmwzmngnmxhklvicnsbl5dchvsy0yikzgf705cq1cplyps3waa03xbjp306bjf167wnplibwki0csnavz98dihq2877g7xqs4dkfg"; - }; - }; - "nan-2.8.0" = { + "nan-2.9.2" = { name = "nan"; packageName = "nan"; - version = "2.8.0"; + version = "2.9.2"; src = fetchurl { - url = "https://registry.npmjs.org/nan/-/nan-2.8.0.tgz"; - sha1 = "ed715f3fe9de02b57a5e6252d90a96675e1f085a"; + url = "https://registry.npmjs.org/nan/-/nan-2.9.2.tgz"; + sha512 = "1iwlv98jbkr46c7hy28crk2m89jiskrp4qfa5ysyacyq8dkbk4hii3cc61irf39b7n6wd9cjlaasmakv9dsknqhb3876zrvrbjvmmcn"; }; }; "nanoassert-1.1.0" = { @@ -4675,33 +2065,6 @@ let sha1 = "d15367e5cb87432ba117d2bf80fdf45aecfb4246"; }; }; - "ncp-2.0.0" = { - name = "ncp"; - packageName = "ncp"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/ncp/-/ncp-2.0.0.tgz"; - sha1 = "195a21d6c46e361d2fb1281ba38b91e9df7bdbb3"; - }; - }; - "ndjson-1.5.0" = { - name = "ndjson"; - packageName = "ndjson"; - version = "1.5.0"; - src = fetchurl { - url = "https://registry.npmjs.org/ndjson/-/ndjson-1.5.0.tgz"; - sha1 = "ae603b36b134bcec347b452422b0bf98d5832ec8"; - }; - }; - "neat-csv-2.1.0" = { - name = "neat-csv"; - packageName = "neat-csv"; - version = "2.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/neat-csv/-/neat-csv-2.1.0.tgz"; - sha1 = "06f58360c4c3b955bd467ddc85ae4511a3907a4c"; - }; - }; "neat-log-1.1.2" = { name = "neat-log"; packageName = "neat-log"; @@ -4711,15 +2074,6 @@ let sha512 = "15fbq2bchsjk85zklc34xl74skmdxbipsf0zjf1k6jfq1fr31h5bn7c6438ff55i9yzrhf11k85ahvahyb73khfjl4sj59zjrqksj9d"; }; }; - "nerf-dart-1.0.0" = { - name = "nerf-dart"; - packageName = "nerf-dart"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/nerf-dart/-/nerf-dart-1.0.0.tgz"; - sha1 = "e6dab7febf5ad816ea81cf5c629c5a0ebde72c1a"; - }; - }; "nets-3.2.0" = { name = "nets"; packageName = "nets"; @@ -4738,33 +2092,6 @@ let sha1 = "4aa7bfd43f03f0b81c9702b13d6a858ddb326f3e"; }; }; - "node-abi-2.1.2" = { - name = "node-abi"; - packageName = "node-abi"; - version = "2.1.2"; - src = fetchurl { - url = "https://registry.npmjs.org/node-abi/-/node-abi-2.1.2.tgz"; - sha512 = "1sd6l8zqa18mlzackwy8vns51zjp8xyrd97nc514b0yvndd0y0wsyx2q9h8zr0k9kra5ys1yq75ggkv5av69cyzxji19rdvr5pjsrc6"; - }; - }; - "node-fetch-npm-2.0.2" = { - name = "node-fetch-npm"; - packageName = "node-fetch-npm"; - version = "2.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/node-fetch-npm/-/node-fetch-npm-2.0.2.tgz"; - sha512 = "0bw6m444q0jc2gmw1yb0im1jv6vhky6d071p72c26ajvf2a7710jq8cp5ampf8j7kdbki7j0mbsi15dh93vrhkpvqpkw0i6ajdk34lw"; - }; - }; - "node-gyp-3.6.2" = { - name = "node-gyp"; - packageName = "node-gyp"; - version = "3.6.2"; - src = fetchurl { - url = "https://registry.npmjs.org/node-gyp/-/node-gyp-3.6.2.tgz"; - sha1 = "9bfbe54562286284838e750eac05295853fa1c60"; - }; - }; "node-gyp-build-3.2.2" = { name = "node-gyp-build"; packageName = "node-gyp-build"; @@ -4774,24 +2101,6 @@ let sha512 = "34hwi28wvvh5nn8bv71n0fb83xjyk84jsn8j9zgkaqnfigpv2hk6fs9jaffsn7qi3yi4n7iwd9yjyagd1rh74ckzdf5s6l59b8vzidp"; }; }; - "noop-logger-0.1.1" = { - name = "noop-logger"; - packageName = "noop-logger"; - version = "0.1.1"; - src = fetchurl { - url = "https://registry.npmjs.org/noop-logger/-/noop-logger-0.1.1.tgz"; - sha1 = "94a2b1633c4f1317553007d8966fd0e841b6a4c2"; - }; - }; - "noop6-1.0.7" = { - name = "noop6"; - packageName = "noop6"; - version = "1.0.7"; - src = fetchurl { - url = "https://registry.npmjs.org/noop6/-/noop6-1.0.7.tgz"; - sha1 = "96767bf2058ba59ca8cb91559347ddc80239fa8e"; - }; - }; "nopt-3.0.6" = { name = "nopt"; packageName = "nopt"; @@ -4810,15 +2119,6 @@ let sha1 = "d0d4685afd5415193c8c7505602d0d17cd64474d"; }; }; - "normalize-package-data-2.4.0" = { - name = "normalize-package-data"; - packageName = "normalize-package-data"; - version = "2.4.0"; - src = fetchurl { - url = "https://registry.npmjs.org/normalize-package-data/-/normalize-package-data-2.4.0.tgz"; - sha512 = "01wzws79ps84ylshjb7rfpjykgiqxnpr89s52p2yyzfx8nfvyh5flvf1almiiavsi75xgi8g3s5davc1mmgz7gn8yvlqz6gnhax8f7n"; - }; - }; "normalize-path-2.1.1" = { name = "normalize-path"; packageName = "normalize-path"; @@ -4828,159 +2128,6 @@ let sha1 = "1ab28b556e198363a8c1a6f7e6fa20137fe6aed9"; }; }; - "normalize-registry-url-1.0.0" = { - name = "normalize-registry-url"; - packageName = "normalize-registry-url"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/normalize-registry-url/-/normalize-registry-url-1.0.0.tgz"; - sha512 = "3s6mrnn04pf7i9gqc04l6c4mnwdwy08235c4rd1rzw080z1a27bs1xwh2fcbzc8p1lbm4xjbby1g11pd38i4wsfjarbsvvmrvir7znj"; - }; - }; - "normalize-ssh-1.0.0" = { - name = "normalize-ssh"; - packageName = "normalize-ssh"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/normalize-ssh/-/normalize-ssh-1.0.0.tgz"; - sha1 = "22a8308fa7cd932bdb49af74ecac644cf4a6196b"; - }; - }; - "normalize-url-2.0.1" = { - name = "normalize-url"; - packageName = "normalize-url"; - version = "2.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/normalize-url/-/normalize-url-2.0.1.tgz"; - sha512 = "0rykwifg14xfgm9m6md48rkqqxa2cya4xdsv7jjciacis2nz6dzaccpzyldlpvy14rvihpxbdiysfn49a8x8x5jw84klmxzh9di98qg"; - }; - }; - "not-bundled-npm-5.5.1" = { - name = "not-bundled-npm"; - packageName = "not-bundled-npm"; - version = "5.5.1"; - src = fetchurl { - url = "https://registry.npmjs.org/not-bundled-npm/-/not-bundled-npm-5.5.1.tgz"; - sha512 = "1mzbw8sibjcs0c9ldxq90v7z5nrni5jz1khkbv7yvxf2gxqdp12b85fzs9qw3lrxjjcxk5w32rzadaz0q0llpqs72ikxcpi3i4wak9a"; - }; - }; - "npm-bundled-1.0.3" = { - name = "npm-bundled"; - packageName = "npm-bundled"; - version = "1.0.3"; - src = fetchurl { - url = "https://registry.npmjs.org/npm-bundled/-/npm-bundled-1.0.3.tgz"; - sha512 = "0xk8ky1cjf8q2wkbgfzplpn04sm9xnl6i71dwnc29rfh8m2glan5nd6l4k3q7ikci7xpwfpcmyy3frr873zndjmhbr344grkyh3f907"; - }; - }; - "npm-cache-filename-1.0.2" = { - name = "npm-cache-filename"; - packageName = "npm-cache-filename"; - version = "1.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/npm-cache-filename/-/npm-cache-filename-1.0.2.tgz"; - sha1 = "ded306c5b0bfc870a9e9faf823bc5f283e05ae11"; - }; - }; - "npm-install-checks-3.0.0" = { - name = "npm-install-checks"; - packageName = "npm-install-checks"; - version = "3.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/npm-install-checks/-/npm-install-checks-3.0.0.tgz"; - sha1 = "d4aecdfd51a53e3723b7b2f93b2ee28e307bc0d7"; - }; - }; - "npm-lifecycle-1.0.3" = { - name = "npm-lifecycle"; - packageName = "npm-lifecycle"; - version = "1.0.3"; - src = fetchurl { - url = "https://registry.npmjs.org/npm-lifecycle/-/npm-lifecycle-1.0.3.tgz"; - sha512 = "0iapgirmdb46ia3apm6fsb9qv9c0hi4k9jflrxlgnrm0jhliqgas49lmpz06xafncx1sxgjngl0fw3gr472c7kapzdvpivf0fp5miqa"; - }; - }; - "npm-lifecycle-2.0.0" = { - name = "npm-lifecycle"; - packageName = "npm-lifecycle"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/npm-lifecycle/-/npm-lifecycle-2.0.0.tgz"; - sha512 = "1rwl5baayxqs7bcgbrjjbrl8lj46p9r4b4k9ad9gnkvgcs5ghsdr9fi6s4xmd0a9dlli0hfwf5mrd9h0rxmlh9zbn553lwfbp9wfkk8"; - }; - }; - "npm-package-arg-5.1.2" = { - name = "npm-package-arg"; - packageName = "npm-package-arg"; - version = "5.1.2"; - src = fetchurl { - url = "https://registry.npmjs.org/npm-package-arg/-/npm-package-arg-5.1.2.tgz"; - sha512 = "36g1gm57qcvdgb4lm6ibl9pgma8lgx8l8i2jzap6w3v36wfzsqa7vb411zd26yp9rgcq23951vl5j6pac22qd5h9x7jm9raznnnr460"; - }; - }; - "npm-package-arg-6.0.0" = { - name = "npm-package-arg"; - packageName = "npm-package-arg"; - version = "6.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/npm-package-arg/-/npm-package-arg-6.0.0.tgz"; - sha512 = "15a1x3fjip5waxap8dbjkm88j0c2bcnay8pw14p74h1499wznynw2if91shrqlrbzwia09x4xiphp6wkxga5z8vf9k08bjarn1vn047"; - }; - }; - "npm-packlist-1.1.10" = { - name = "npm-packlist"; - packageName = "npm-packlist"; - version = "1.1.10"; - src = fetchurl { - url = "https://registry.npmjs.org/npm-packlist/-/npm-packlist-1.1.10.tgz"; - sha512 = "1c5z9bibdf07na26xffshagxk8gfnsbaav802dkvbrlgj4mixz4giji96yb1zs7p9yl9n28mlkhjp9jklq55j27c0i837vk507v8001"; - }; - }; - "npm-pick-manifest-1.0.4" = { - name = "npm-pick-manifest"; - packageName = "npm-pick-manifest"; - version = "1.0.4"; - src = fetchurl { - url = "https://registry.npmjs.org/npm-pick-manifest/-/npm-pick-manifest-1.0.4.tgz"; - sha512 = "02pmkjkn2nbr1ypwzwybyd6bfckdwr8cr0nah5bwadz21yd7cd9fbvxqalfdc41n88p1zv8qbgp149knkaixnrl8l7jnrwfxislvb1h"; - }; - }; - "npm-profile-2.0.5" = { - name = "npm-profile"; - packageName = "npm-profile"; - version = "2.0.5"; - src = fetchurl { - url = "https://registry.npmjs.org/npm-profile/-/npm-profile-2.0.5.tgz"; - sha512 = "2325avpmbzxl4vi1hxnxv96rw9j0y712ym3mph3hrsvgq4p8d0yh44vnja22plnw9vplskcx661j2spzqka65zsszzngvwm806skfdl"; - }; - }; - "npm-registry-client-8.5.0" = { - name = "npm-registry-client"; - packageName = "npm-registry-client"; - version = "8.5.0"; - src = fetchurl { - url = "https://registry.npmjs.org/npm-registry-client/-/npm-registry-client-8.5.0.tgz"; - sha512 = "1nwp5cfjmy4k14g6ziz7zpia8f66ximhrdhw49cj2w173bibq1sgc4d5w951ql5dqf0hcmia956ld9y7qs2q1fx6s2j446zhvdk0irn"; - }; - }; - "npm-run-path-2.0.2" = { - name = "npm-run-path"; - packageName = "npm-run-path"; - version = "2.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/npm-run-path/-/npm-run-path-2.0.2.tgz"; - sha1 = "35a9232dfa35d7067b4cb2ddf2357b1871536c5f"; - }; - }; - "npm-user-validate-1.0.0" = { - name = "npm-user-validate"; - packageName = "npm-user-validate"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/npm-user-validate/-/npm-user-validate-1.0.0.tgz"; - sha1 = "8ceca0f5cea04d4e93519ef72d0557a75122e951"; - }; - }; "npmlog-4.1.2" = { name = "npmlog"; packageName = "npmlog"; @@ -5017,24 +2164,6 @@ let sha1 = "2109adc7965887cfc05cbbd442cac8bfbb360863"; }; }; - "object-keys-1.0.11" = { - name = "object-keys"; - packageName = "object-keys"; - version = "1.0.11"; - src = fetchurl { - url = "https://registry.npmjs.org/object-keys/-/object-keys-1.0.11.tgz"; - sha1 = "c54601778ad560f1142ce0e01bcca8b56d13426d"; - }; - }; - "object.getownpropertydescriptors-2.0.3" = { - name = "object.getownpropertydescriptors"; - packageName = "object.getownpropertydescriptors"; - version = "2.0.3"; - src = fetchurl { - url = "https://registry.npmjs.org/object.getownpropertydescriptors/-/object.getownpropertydescriptors-2.0.3.tgz"; - sha1 = "8758c846f5b407adab0f236e0986f14b051caa16"; - }; - }; "object.omit-2.0.1" = { name = "object.omit"; packageName = "object.omit"; @@ -5044,15 +2173,6 @@ let sha1 = "1a9c744829f39dbb858c76ca3579ae2a54ebd1fa"; }; }; - "observatory-1.0.0" = { - name = "observatory"; - packageName = "observatory"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/observatory/-/observatory-1.0.0.tgz"; - sha1 = "2baa606e8299e6866914ec9c8a4db6a41136e59b"; - }; - }; "once-1.4.0" = { name = "once"; packageName = "once"; @@ -5062,24 +2182,6 @@ let sha1 = "583b1aa775961d4b113ac17d9c50baef9dd76bd1"; }; }; - "onetime-2.0.1" = { - name = "onetime"; - packageName = "onetime"; - version = "2.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/onetime/-/onetime-2.0.1.tgz"; - sha1 = "067428230fd67443b2794b22bba528b6867962d4"; - }; - }; - "opener-1.4.3" = { - name = "opener"; - packageName = "opener"; - version = "1.4.3"; - src = fetchurl { - url = "https://registry.npmjs.org/opener/-/opener-1.4.3.tgz"; - sha1 = "5c6da2c5d7e5831e8ffa3964950f8d6674ac90b8"; - }; - }; "optparse-1.0.5" = { name = "optparse"; packageName = "optparse"; @@ -5098,15 +2200,6 @@ let sha1 = "ffbc4988336e0e833de0c168c7ef152121aa7fb3"; }; }; - "os-locale-2.1.0" = { - name = "os-locale"; - packageName = "os-locale"; - version = "2.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/os-locale/-/os-locale-2.1.0.tgz"; - sha512 = "0lafrp0i2ajapsnma0x74q7zscn97a56i5hh58a0nyig2igfx9fqn4ain9kvjrr06as5gzdrv2wdf52qc5m861fd0f4cv69ghdjbjyy"; - }; - }; "os-tmpdir-1.0.2" = { name = "os-tmpdir"; packageName = "os-tmpdir"; @@ -5116,193 +2209,13 @@ let sha1 = "bbe67406c79aa85c5cfec766fe5734555dfa1274"; }; }; - "osenv-0.1.4" = { + "osenv-0.1.5" = { name = "osenv"; packageName = "osenv"; - version = "0.1.4"; + version = "0.1.5"; src = fetchurl { - url = "https://registry.npmjs.org/osenv/-/osenv-0.1.4.tgz"; - sha1 = "42fe6d5953df06c8064be6f176c3d05aaaa34644"; - }; - }; - "overlap-2.0.0" = { - name = "overlap"; - packageName = "overlap"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/overlap/-/overlap-2.0.0.tgz"; - sha1 = "b29b6bb2ad7569c4e66faef28cb5d74361179cb4"; - }; - }; - "p-cancelable-0.3.0" = { - name = "p-cancelable"; - packageName = "p-cancelable"; - version = "0.3.0"; - src = fetchurl { - url = "https://registry.npmjs.org/p-cancelable/-/p-cancelable-0.3.0.tgz"; - sha512 = "35jir2yjv2l3v8aj062w0hfinzgwpb1sbhmaym8h4xn78j498naj7mkf4rpv74n5bfkysxb7l893l2yw3dpqk5dgb2yiwr8pcydjmj5"; - }; - }; - "p-defer-1.0.0" = { - name = "p-defer"; - packageName = "p-defer"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/p-defer/-/p-defer-1.0.0.tgz"; - sha1 = "9f6eb182f6c9aa8cd743004a7d4f96b196b0fb0c"; - }; - }; - "p-every-1.0.2" = { - name = "p-every"; - packageName = "p-every"; - version = "1.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/p-every/-/p-every-1.0.2.tgz"; - sha1 = "4e01d85c23da19ed71a4afba319bdb4d94c85e00"; - }; - }; - "p-filter-1.0.0" = { - name = "p-filter"; - packageName = "p-filter"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/p-filter/-/p-filter-1.0.0.tgz"; - sha1 = "629d317150209c8fd508ba137713ef4bb920e9db"; - }; - }; - "p-finally-1.0.0" = { - name = "p-finally"; - packageName = "p-finally"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/p-finally/-/p-finally-1.0.0.tgz"; - sha1 = "3fbcfb15b899a44123b34b6dcc18b724336a2cae"; - }; - }; - "p-is-promise-1.1.0" = { - name = "p-is-promise"; - packageName = "p-is-promise"; - version = "1.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/p-is-promise/-/p-is-promise-1.1.0.tgz"; - sha1 = "9c9456989e9f6588017b0434d56097675c3da05e"; - }; - }; - "p-limit-1.2.0" = { - name = "p-limit"; - packageName = "p-limit"; - version = "1.2.0"; - src = fetchurl { - url = "https://registry.npmjs.org/p-limit/-/p-limit-1.2.0.tgz"; - sha512 = "2g0r6r6bbcdp6lrxbj2zbcihr1byd55kycm1ijz80l2zvmcvhqsbd7rhmfqylp004d61fibvmwzk4ig89dbyk4azpwgll7dllhsvwv3"; - }; - }; - "p-locate-2.0.0" = { - name = "p-locate"; - packageName = "p-locate"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/p-locate/-/p-locate-2.0.0.tgz"; - sha1 = "20a0103b222a70c8fd39cc2e580680f3dde5ec43"; - }; - }; - "p-map-1.2.0" = { - name = "p-map"; - packageName = "p-map"; - version = "1.2.0"; - src = fetchurl { - url = "https://registry.npmjs.org/p-map/-/p-map-1.2.0.tgz"; - sha512 = "084pyivsr35xi3fdmpznf0c0nc9jz15hak8iyh3v24n25b376blg13ngb4mgpm71zdnfp9b17zbyn728z0jjz1r674k71hd4c0cmb5g"; - }; - }; - "p-queue-2.3.0" = { - name = "p-queue"; - packageName = "p-queue"; - version = "2.3.0"; - src = fetchurl { - url = "https://registry.npmjs.org/p-queue/-/p-queue-2.3.0.tgz"; - sha1 = "65d55e71bc1500fc413122da98ae457ff8a7c038"; - }; - }; - "p-reduce-1.0.0" = { - name = "p-reduce"; - packageName = "p-reduce"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/p-reduce/-/p-reduce-1.0.0.tgz"; - sha1 = "18c2b0dd936a4690a529f8231f58a0fdb6a47dfa"; - }; - }; - "p-series-1.0.0" = { - name = "p-series"; - packageName = "p-series"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/p-series/-/p-series-1.0.0.tgz"; - sha1 = "7ec9e7b4406cc32066298a6f9860e55e91b36e07"; - }; - }; - "p-timeout-2.0.1" = { - name = "p-timeout"; - packageName = "p-timeout"; - version = "2.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/p-timeout/-/p-timeout-2.0.1.tgz"; - sha512 = "0h1wg3bw3pyf3vlnxxfnrs3h33lwbx5n1lz4cz8ivh7bi8vjd6makxf6p1xz1d70ww3gj2ghryhbg6w1myxacgirk51ym23qzksdizk"; - }; - }; - "p-try-1.0.0" = { - name = "p-try"; - packageName = "p-try"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/p-try/-/p-try-1.0.0.tgz"; - sha1 = "cbc79cdbaf8fd4228e13f621f2b1a237c1b207b3"; - }; - }; - "package-json-4.0.1" = { - name = "package-json"; - packageName = "package-json"; - version = "4.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/package-json/-/package-json-4.0.1.tgz"; - sha1 = "8869a0401253661c4c4ca3da6c2121ed555f5eed"; - }; - }; - "package-store-0.15.2" = { - name = "package-store"; - packageName = "package-store"; - version = "0.15.2"; - src = fetchurl { - url = "https://registry.npmjs.org/package-store/-/package-store-0.15.2.tgz"; - sha512 = "074xsl6ca8j68cvbh8gj3h846g9rxgcxwxhbryab9f72brc5lmcq3dcj80kbjbykkzgpikzxj4qdmvxzwrhj3bilgncbbm0ladlv17r"; - }; - }; - "pacote-6.0.4" = { - name = "pacote"; - packageName = "pacote"; - version = "6.0.4"; - src = fetchurl { - url = "https://registry.npmjs.org/pacote/-/pacote-6.0.4.tgz"; - sha512 = "36bx0mnsvm3fvq0vbcl05j6fsjf4v4gks1hlxqyga0jxz491cis9y38j8q9cmmfdfbx9xaz3n3h93h0ik4bkn82rb3nz2413wk7xfxi"; - }; - }; - "pako-0.2.9" = { - name = "pako"; - packageName = "pako"; - version = "0.2.9"; - src = fetchurl { - url = "https://registry.npmjs.org/pako/-/pako-0.2.9.tgz"; - sha1 = "f3f7522f4ef782348da8161bad9ecfd51bf83a75"; - }; - }; - "parallel-transform-1.1.0" = { - name = "parallel-transform"; - packageName = "parallel-transform"; - version = "1.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/parallel-transform/-/parallel-transform-1.1.0.tgz"; - sha1 = "d410f065b05da23081fcd10f28854c29bda33b06"; + url = "https://registry.npmjs.org/osenv/-/osenv-0.1.5.tgz"; + sha512 = "3ddw0y41pxv08ls5xhmq1bi81hppjbr45k78cjfx99vznh5znrj5g1b1wab9caj1mqlsvmfms0zm9cfb47ygm0d8wv5fccx8049q9fh"; }; }; "parse-glob-3.0.4" = { @@ -5323,69 +2236,6 @@ let sha1 = "6ae83a7aa25a9d9b700acc28698cd1f1ed7e9536"; }; }; - "parse-it-1.0.8" = { - name = "parse-it"; - packageName = "parse-it"; - version = "1.0.8"; - src = fetchurl { - url = "https://registry.npmjs.org/parse-it/-/parse-it-1.0.8.tgz"; - sha1 = "e9a53bde18c8049e7bb415b73e16d3292df8eae7"; - }; - }; - "parse-json-2.2.0" = { - name = "parse-json"; - packageName = "parse-json"; - version = "2.2.0"; - src = fetchurl { - url = "https://registry.npmjs.org/parse-json/-/parse-json-2.2.0.tgz"; - sha1 = "f480f40434ef80741f8469099f8dea18f55a4dc9"; - }; - }; - "parse-json-4.0.0" = { - name = "parse-json"; - packageName = "parse-json"; - version = "4.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/parse-json/-/parse-json-4.0.0.tgz"; - sha1 = "be35f5425be1f7f6c747184f98a788cb99477ee0"; - }; - }; - "parse-npm-tarball-url-1.0.2" = { - name = "parse-npm-tarball-url"; - packageName = "parse-npm-tarball-url"; - version = "1.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/parse-npm-tarball-url/-/parse-npm-tarball-url-1.0.2.tgz"; - sha512 = "26zvr85a2wbbkqrwzyy3226waj0p5z3vrh19gxxvkgxf98qgvl1jdz20hvsr20x5f1viwqm9n2yr8yi61kkb9h0cd1kszw2yv8542cs"; - }; - }; - "parse-url-1.3.11" = { - name = "parse-url"; - packageName = "parse-url"; - version = "1.3.11"; - src = fetchurl { - url = "https://registry.npmjs.org/parse-url/-/parse-url-1.3.11.tgz"; - sha1 = "57c15428ab8a892b1f43869645c711d0e144b554"; - }; - }; - "path-absolute-1.0.0" = { - name = "path-absolute"; - packageName = "path-absolute"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/path-absolute/-/path-absolute-1.0.0.tgz"; - sha512 = "2fjzk70izrnlxrvqprakq310j8b1zcvsln7aji0qfljcl5is8c7aip8bc6ly07v8qg6l4rsrgzyj411rlbzyhmgnsiwzlnlhkr1lk5k"; - }; - }; - "path-exists-3.0.0" = { - name = "path-exists"; - packageName = "path-exists"; - version = "3.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/path-exists/-/path-exists-3.0.0.tgz"; - sha1 = "ce0ebeaa5f78cb18925ea7d810d7b59b010fd515"; - }; - }; "path-is-absolute-1.0.1" = { name = "path-is-absolute"; packageName = "path-is-absolute"; @@ -5395,60 +2245,6 @@ let sha1 = "174b9268735534ffbc7ace6bf53a5a9e1b5c5f5f"; }; }; - "path-is-inside-1.0.2" = { - name = "path-is-inside"; - packageName = "path-is-inside"; - version = "1.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/path-is-inside/-/path-is-inside-1.0.2.tgz"; - sha1 = "365417dede44430d1c11af61027facf074bdfc53"; - }; - }; - "path-key-2.0.1" = { - name = "path-key"; - packageName = "path-key"; - version = "2.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/path-key/-/path-key-2.0.1.tgz"; - sha1 = "411cadb574c5a140d3a4b1910d40d80cc9f40b40"; - }; - }; - "path-name-1.0.0" = { - name = "path-name"; - packageName = "path-name"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/path-name/-/path-name-1.0.0.tgz"; - sha1 = "8ca063a63de7982dfa95760edaffd10214494f24"; - }; - }; - "path-type-2.0.0" = { - name = "path-type"; - packageName = "path-type"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/path-type/-/path-type-2.0.0.tgz"; - sha1 = "f012ccb8415b7096fc2daa1054c3d72389594c73"; - }; - }; - "path-type-3.0.0" = { - name = "path-type"; - packageName = "path-type"; - version = "3.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/path-type/-/path-type-3.0.0.tgz"; - sha512 = "2z1csf4c3fmlwl0ahk533z5zqkjdf36ccfx11kakl9xran9f5asxm4cxjq4lx1kwqdp8gki786cgpldvgrkvfc7pcvh07j5ssqm8rjg"; - }; - }; - "peek-stream-1.1.2" = { - name = "peek-stream"; - packageName = "peek-stream"; - version = "1.1.2"; - src = fetchurl { - url = "https://registry.npmjs.org/peek-stream/-/peek-stream-1.1.2.tgz"; - sha1 = "97eb76365bcfd8c89e287f55c8b69d4c3e9bcc52"; - }; - }; "performance-now-0.2.0" = { name = "performance-now"; packageName = "performance-now"; @@ -5467,42 +2263,6 @@ let sha1 = "6309f4e0e5fa913ec1c69307ae364b4b377c9e7b"; }; }; - "pify-2.3.0" = { - name = "pify"; - packageName = "pify"; - version = "2.3.0"; - src = fetchurl { - url = "https://registry.npmjs.org/pify/-/pify-2.3.0.tgz"; - sha1 = "ed141a6ac043a849ea588498e7dca8b15330e90c"; - }; - }; - "pify-3.0.0" = { - name = "pify"; - packageName = "pify"; - version = "3.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/pify/-/pify-3.0.0.tgz"; - sha1 = "e5a4acd2c101fdf3d9a4d07f0dbc4db49dd28176"; - }; - }; - "pinkie-2.0.4" = { - name = "pinkie"; - packageName = "pinkie"; - version = "2.0.4"; - src = fetchurl { - url = "https://registry.npmjs.org/pinkie/-/pinkie-2.0.4.tgz"; - sha1 = "72556b80cfa0d48a974e80e77248e80ed4f7f870"; - }; - }; - "pinkie-promise-2.0.1" = { - name = "pinkie-promise"; - packageName = "pinkie-promise"; - version = "2.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/pinkie-promise/-/pinkie-promise-2.0.1.tgz"; - sha1 = "2135d6dfa7a358c069ac9b178776288228450ffa"; - }; - }; "pkginfo-0.3.1" = { name = "pkginfo"; packageName = "pkginfo"; @@ -5521,96 +2281,6 @@ let sha1 = "b5418ef0439de5425fc4995042dced14fb2a84ff"; }; }; - "pkgs-graph-2.0.0-0" = { - name = "pkgs-graph"; - packageName = "pkgs-graph"; - version = "2.0.0-0"; - src = fetchurl { - url = "https://registry.npmjs.org/pkgs-graph/-/pkgs-graph-2.0.0-0.tgz"; - sha512 = "3p1llv78shph6qwba9p8vd14hxanjdp1zmzivmn94dzfff2diqkvsc0zar9pj40pl2fwkbqg3p266ilcjbj6ajhzn8kcpmir5fx2f0c"; - }; - }; - "pnpm-default-reporter-0.11.8" = { - name = "pnpm-default-reporter"; - packageName = "pnpm-default-reporter"; - version = "0.11.8"; - src = fetchurl { - url = "https://registry.npmjs.org/pnpm-default-reporter/-/pnpm-default-reporter-0.11.8.tgz"; - sha512 = "2x14yf0yi5q5dvq1777khbvah4wpcm92l4il946nq0f7nyra450llgp09q56161rk6qk6x7gr9hffii97c25b98a35pr7gwgc8yfrwz"; - }; - }; - "pnpm-file-reporter-0.0.1" = { - name = "pnpm-file-reporter"; - packageName = "pnpm-file-reporter"; - version = "0.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/pnpm-file-reporter/-/pnpm-file-reporter-0.0.1.tgz"; - sha1 = "f7c3e2164c5cc955a0b3ed661314e6357b3f2e63"; - }; - }; - "pnpm-install-checks-1.1.0" = { - name = "pnpm-install-checks"; - packageName = "pnpm-install-checks"; - version = "1.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/pnpm-install-checks/-/pnpm-install-checks-1.1.0.tgz"; - sha1 = "741d9979762fdfad93f3e469deb4a814d3430008"; - }; - }; - "pnpm-list-2.0.1" = { - name = "pnpm-list"; - packageName = "pnpm-list"; - version = "2.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/pnpm-list/-/pnpm-list-2.0.1.tgz"; - sha512 = "0rrmch43p1dncghmvb6mwv59c0gan88d87fdbvzsmg4lj6j5l4bkfrr5x6gmi9z8f4nf3lqddf5b5wg8l7bb5if6c5wknim1w3l2vlb"; - }; - }; - "pnpm-logger-0.0.0" = { - name = "pnpm-logger"; - packageName = "pnpm-logger"; - version = "0.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/pnpm-logger/-/pnpm-logger-0.0.0.tgz"; - sha1 = "28701b97618a1fc32d2fee1bf410746588bb1a85"; - }; - }; - "pnpm-shrinkwrap-5.1.1" = { - name = "pnpm-shrinkwrap"; - packageName = "pnpm-shrinkwrap"; - version = "5.1.1"; - src = fetchurl { - url = "https://registry.npmjs.org/pnpm-shrinkwrap/-/pnpm-shrinkwrap-5.1.1.tgz"; - sha512 = "0nrnbsdiq01q2383pib07a7hrc602bpl9sf2j05pmjk5xn7hipicp90jdwlzf36wln2bqjzi1zgv5a5fhw41zx3zfad6affppkf8c5d"; - }; - }; - "prebuild-install-2.5.0" = { - name = "prebuild-install"; - packageName = "prebuild-install"; - version = "2.5.0"; - src = fetchurl { - url = "https://registry.npmjs.org/prebuild-install/-/prebuild-install-2.5.0.tgz"; - sha512 = "137vbrb6szyda92qg093yp1l6d2l4s1nb7c0dznjgbyrzsm252spxnrdpmj8nmf170fcq404pgsn0p65sxm4z74p2fyqyd415k742fz"; - }; - }; - "prepend-http-1.0.4" = { - name = "prepend-http"; - packageName = "prepend-http"; - version = "1.0.4"; - src = fetchurl { - url = "https://registry.npmjs.org/prepend-http/-/prepend-http-1.0.4.tgz"; - sha1 = "d4f4562b0ce3696e41ac52d0e002e57a635dc6dc"; - }; - }; - "prepend-http-2.0.0" = { - name = "prepend-http"; - packageName = "prepend-http"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/prepend-http/-/prepend-http-2.0.0.tgz"; - sha1 = "e92434bfa5ea8c19f41cdfd401d741a3c819d897"; - }; - }; "preserve-0.2.0" = { name = "preserve"; packageName = "preserve"; @@ -5629,15 +2299,6 @@ let sha1 = "994b02aa46f699c50b6257b5faaa7fe2557e62d6"; }; }; - "pretty-bytes-4.0.2" = { - name = "pretty-bytes"; - packageName = "pretty-bytes"; - version = "4.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/pretty-bytes/-/pretty-bytes-4.0.2.tgz"; - sha1 = "b2bf82e7350d65c6c33aa95aaa5a4f6327f61cd9"; - }; - }; "pretty-hash-1.0.1" = { name = "pretty-hash"; packageName = "pretty-hash"; @@ -5647,24 +2308,6 @@ let sha1 = "16e0579188def56bdb565892bcd05a5d65324807"; }; }; - "printable-characters-1.0.38" = { - name = "printable-characters"; - packageName = "printable-characters"; - version = "1.0.38"; - src = fetchurl { - url = "https://registry.npmjs.org/printable-characters/-/printable-characters-1.0.38.tgz"; - sha1 = "76ef84accfd7f8366fb7138fb92466a916d599bc"; - }; - }; - "proc-output-1.0.6" = { - name = "proc-output"; - packageName = "proc-output"; - version = "1.0.6"; - src = fetchurl { - url = "https://registry.npmjs.org/proc-output/-/proc-output-1.0.6.tgz"; - sha1 = "9ffcfb3ac6a156ee32b7ebd69f024a4f6d896350"; - }; - }; "process-0.5.2" = { name = "process"; packageName = "process"; @@ -5674,15 +2317,6 @@ let sha1 = "1638d8a8e34c2f440a91db95ab9aeb677fc185cf"; }; }; - "process-exists-3.0.0" = { - name = "process-exists"; - packageName = "process-exists"; - version = "3.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/process-exists/-/process-exists-3.0.0.tgz"; - sha512 = "3lwxdzkx3bzfvb8qvrjccjdk90advh7p3j52d1b4hn3v2d7cf780k7wbvy94w6chgpq6lrrs6m0n122463q7g8z06aajbjqncq0db9h"; - }; - }; "process-nextick-args-1.0.7" = { name = "process-nextick-args"; packageName = "process-nextick-args"; @@ -5692,6 +2326,15 @@ let sha1 = "150e20b756590ad3f91093f25a4f2ad8bff30ba3"; }; }; + "process-nextick-args-2.0.0" = { + name = "process-nextick-args"; + packageName = "process-nextick-args"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/process-nextick-args/-/process-nextick-args-2.0.0.tgz"; + sha512 = "0rw8xpqqkhs91722slvzf8icxfaimqp4w8zb3840jxr7r8n8035byl6dhdi5bm0yr6x7sdws0gf3m025fg6hqgaklwlbl4d7bah5l9j"; + }; + }; "progress-string-1.2.2" = { name = "progress-string"; packageName = "progress-string"; @@ -5701,24 +2344,6 @@ let sha512 = "07n7s98b5fqdx9jspg14zkw0dndfdpbrd12f5nj5c7m6aifvl4nn27qdbrgy6gzb837cs86cakldqh5kwbi7fv6ra9ll9q83qhsya97"; }; }; - "promise-inflight-1.0.1" = { - name = "promise-inflight"; - packageName = "promise-inflight"; - version = "1.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/promise-inflight/-/promise-inflight-1.0.1.tgz"; - sha1 = "98472870bf228132fcbdd868129bad12c3c029e3"; - }; - }; - "promise-retry-1.1.1" = { - name = "promise-retry"; - packageName = "promise-retry"; - version = "1.1.1"; - src = fetchurl { - url = "https://registry.npmjs.org/promise-retry/-/promise-retry-1.1.1.tgz"; - sha1 = "6739e968e3051da20ce6497fb2b50f6911df3d6d"; - }; - }; "prompt-1.0.0" = { name = "prompt"; packageName = "prompt"; @@ -5728,33 +2353,6 @@ let sha1 = "8e57123c396ab988897fb327fd3aedc3e735e4fe"; }; }; - "promzard-0.3.0" = { - name = "promzard"; - packageName = "promzard"; - version = "0.3.0"; - src = fetchurl { - url = "https://registry.npmjs.org/promzard/-/promzard-0.3.0.tgz"; - sha1 = "26a5d6ee8c7dee4cb12208305acfb93ba382a9ee"; - }; - }; - "proper-lockfile-2.0.1" = { - name = "proper-lockfile"; - packageName = "proper-lockfile"; - version = "2.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/proper-lockfile/-/proper-lockfile-2.0.1.tgz"; - sha1 = "159fb06193d32003f4b3691dd2ec1a634aa80d1d"; - }; - }; - "proto-list-1.2.4" = { - name = "proto-list"; - packageName = "proto-list"; - version = "1.2.4"; - src = fetchurl { - url = "https://registry.npmjs.org/proto-list/-/proto-list-1.2.4.tgz"; - sha1 = "212d5bfe1318306a420f6402b8e26ff39647a849"; - }; - }; "protocol-buffers-encodings-1.1.0" = { name = "protocol-buffers-encodings"; packageName = "protocol-buffers-encodings"; @@ -5764,51 +2362,6 @@ let sha512 = "28vhf9zv4h6gc3nia9pshzn16jm1h6r58nj2mwmkji35fjbscjwxrxigwy87j82y8wayn29qgc31939b1fyk6dmvvhwv1gp0ywc8s2a"; }; }; - "protocols-1.4.6" = { - name = "protocols"; - packageName = "protocols"; - version = "1.4.6"; - src = fetchurl { - url = "https://registry.npmjs.org/protocols/-/protocols-1.4.6.tgz"; - sha1 = "f8bb263ea1b5fd7a7604d26b8be39bd77678bf8a"; - }; - }; - "protoduck-4.0.0" = { - name = "protoduck"; - packageName = "protoduck"; - version = "4.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/protoduck/-/protoduck-4.0.0.tgz"; - sha1 = "fe4874d8c7913366cfd9ead12453a22cd3657f8e"; - }; - }; - "prr-1.0.1" = { - name = "prr"; - packageName = "prr"; - version = "1.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/prr/-/prr-1.0.1.tgz"; - sha1 = "d3fc114ba06995a45ec6893f484ceb1d78f5f476"; - }; - }; - "ps-list-4.0.0" = { - name = "ps-list"; - packageName = "ps-list"; - version = "4.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/ps-list/-/ps-list-4.0.0.tgz"; - sha1 = "57c8b3d38161ee8977811cd32a5dc52237fdb299"; - }; - }; - "pseudomap-1.0.2" = { - name = "pseudomap"; - packageName = "pseudomap"; - version = "1.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/pseudomap/-/pseudomap-1.0.2.tgz"; - sha1 = "f052a28da70e618917ef0a8ac34c1ae5a68286b3"; - }; - }; "pump-1.0.3" = { name = "pump"; packageName = "pump"; @@ -5827,15 +2380,6 @@ let sha512 = "288hcmlwdnqda84ylx9cv413ic0r59k0dp71hy7a200jsb7h1y63277jwdp1jdp13c1b3pl6g2gzr5gjv9p72f5sp7w3p0d34swrqxf"; }; }; - "pumpify-1.4.0" = { - name = "pumpify"; - packageName = "pumpify"; - version = "1.4.0"; - src = fetchurl { - url = "https://registry.npmjs.org/pumpify/-/pumpify-1.4.0.tgz"; - sha512 = "1h37biy199n445y10vpyiswwcxv8zigfqp0b1xwgbyjq51f2dhjn1pcggjc4j5ccbd64l1ivfi0bqinx4m5clcawvwggy7jv93qsjfs"; - }; - }; "punycode-1.4.1" = { name = "punycode"; packageName = "punycode"; @@ -5845,15 +2389,6 @@ let sha1 = "c0d5a63b2718800ad8e1eb0fa5269c84dd41845e"; }; }; - "qrcode-terminal-0.11.0" = { - name = "qrcode-terminal"; - packageName = "qrcode-terminal"; - version = "0.11.0"; - src = fetchurl { - url = "https://registry.npmjs.org/qrcode-terminal/-/qrcode-terminal-0.11.0.tgz"; - sha1 = "ffc6c28a2fc0bfb47052b47e23f4f446a5fbdb9e"; - }; - }; "qs-6.4.0" = { name = "qs"; packageName = "qs"; @@ -5872,49 +2407,13 @@ let sha512 = "3waqapyj1k4g135sgj636rmswiaixq19is1rw0rpv4qp6k7dl0a9nwy06m7yl5lbdk9p6xpwwngnggbzlzaz6rh11c86j2nvnnf273r"; }; }; - "query-string-5.0.1" = { - name = "query-string"; - packageName = "query-string"; - version = "5.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/query-string/-/query-string-5.0.1.tgz"; - sha512 = "0lcnspv96dv03600bgjxk2ypak8mysp77n47jkddpz6ldcgscwyan1akqjrddii4abb2brz6gr6yq9pcbdx63m9i16kk8m5028qrkv8"; - }; - }; - "qw-1.0.1" = { - name = "qw"; - packageName = "qw"; - version = "1.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/qw/-/qw-1.0.1.tgz"; - sha1 = "efbfdc740f9ad054304426acb183412cc8b996d4"; - }; - }; - "ramda-0.24.1" = { - name = "ramda"; - packageName = "ramda"; - version = "0.24.1"; - src = fetchurl { - url = "https://registry.npmjs.org/ramda/-/ramda-0.24.1.tgz"; - sha1 = "c3b7755197f35b8dc3502228262c4c91ddb6b857"; - }; - }; - "ramda-0.25.0" = { - name = "ramda"; - packageName = "ramda"; - version = "0.25.0"; - src = fetchurl { - url = "https://registry.npmjs.org/ramda/-/ramda-0.25.0.tgz"; - sha512 = "1qixam46hr8jsw2f4g0rvhn8jf493dpjqhi65ggacz83ndqwnal1m8kiy18d3ak9x4lapcjb1fvrx18zj26jfhlxp51vhsghnnmyyhr"; - }; - }; - "random-access-file-1.8.1" = { + "random-access-file-2.0.1" = { name = "random-access-file"; packageName = "random-access-file"; - version = "1.8.1"; + version = "2.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/random-access-file/-/random-access-file-1.8.1.tgz"; - sha512 = "3pvi9knrjp8krj1hsg8i2qmv5097fid3qnyz4wh2dvpr37x2ga6qqk7afh5f1i5sb9dsw169bara13knccdmjwnivb62xgywz868j7r"; + url = "https://registry.npmjs.org/random-access-file/-/random-access-file-2.0.1.tgz"; + sha512 = "2zbpqbs4dvnpc3dpr2yz8phz6r49j4a57jjlx7nqk6rzy2q0437g537czdxyk7cfdmhsc0yvlvs8b7p7sxax1slpwz4d8bkb851zglx"; }; }; "random-access-memory-2.4.0" = { @@ -5926,6 +2425,15 @@ let sha1 = "72f3d865b4b55a259879473e2fb2de3569c69ee2"; }; }; + "random-access-storage-1.1.1" = { + name = "random-access-storage"; + packageName = "random-access-storage"; + version = "1.1.1"; + src = fetchurl { + url = "https://registry.npmjs.org/random-access-storage/-/random-access-storage-1.1.1.tgz"; + sha512 = "1dswb4yr7m8350bx8z0z19iqgk2a43qbfc1qf8n3w483mqqg0f5gsykd5cg14yy8jik0n9ghy7j2f5kp1anzjna46ih9ncxpm0vq0k1"; + }; + }; "randomatic-1.1.7" = { name = "randomatic"; packageName = "randomatic"; @@ -5953,13 +2461,13 @@ let sha1 = "f49be6b487894ddc40dcc94a322f611092e00d5e"; }; }; - "rc-1.2.4" = { + "rc-1.2.5" = { name = "rc"; packageName = "rc"; - version = "1.2.4"; + version = "1.2.5"; src = fetchurl { - url = "https://registry.npmjs.org/rc/-/rc-1.2.4.tgz"; - sha1 = "a0f606caae2a3b862bbd0ef85482c0125b315fa3"; + url = "https://registry.npmjs.org/rc/-/rc-1.2.5.tgz"; + sha1 = "275cd687f6e3b36cc756baa26dfee80a790301fd"; }; }; "read-1.0.7" = { @@ -5971,94 +2479,13 @@ let sha1 = "b3da19bd052431a97671d44a42634adf710b40c4"; }; }; - "read-cmd-shim-1.0.1" = { - name = "read-cmd-shim"; - packageName = "read-cmd-shim"; - version = "1.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/read-cmd-shim/-/read-cmd-shim-1.0.1.tgz"; - sha1 = "2d5d157786a37c055d22077c32c53f8329e91c7b"; - }; - }; - "read-installed-4.0.3" = { - name = "read-installed"; - packageName = "read-installed"; - version = "4.0.3"; - src = fetchurl { - url = "https://registry.npmjs.org/read-installed/-/read-installed-4.0.3.tgz"; - sha1 = "ff9b8b67f187d1e4c29b9feb31f6b223acd19067"; - }; - }; - "read-package-json-2.0.12" = { - name = "read-package-json"; - packageName = "read-package-json"; - version = "2.0.12"; - src = fetchurl { - url = "https://registry.npmjs.org/read-package-json/-/read-package-json-2.0.12.tgz"; - sha512 = "15w2z3m1iysjf0zwvyc5mix8nypx42shx90alil4sslq6caj3pgk59zsn2ppxn95nls6bs7yw7khl5rmlq9gljv27w3vs2gxg9wigwv"; - }; - }; - "read-package-tree-5.1.6" = { - name = "read-package-tree"; - packageName = "read-package-tree"; - version = "5.1.6"; - src = fetchurl { - url = "https://registry.npmjs.org/read-package-tree/-/read-package-tree-5.1.6.tgz"; - sha512 = "0v1k32zqj8bnqzyp5h0jxnkvpgpzpa6z7iyqbpm3p0ylqafbb2zm656mw6gs16zf98l7y218ygpx2kzks00qcycwwx2cny67mlza98l"; - }; - }; - "read-pkg-2.0.0" = { - name = "read-pkg"; - packageName = "read-pkg"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/read-pkg/-/read-pkg-2.0.0.tgz"; - sha1 = "8ef1c0623c6a6db0dc6713c4bfac46332b2368f8"; - }; - }; - "read-pkg-3.0.0" = { - name = "read-pkg"; - packageName = "read-pkg"; - version = "3.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/read-pkg/-/read-pkg-3.0.0.tgz"; - sha1 = "9cbc686978fee65d16c00e2b19c237fcf6e38389"; - }; - }; - "read-pkg-up-2.0.0" = { - name = "read-pkg-up"; - packageName = "read-pkg-up"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/read-pkg-up/-/read-pkg-up-2.0.0.tgz"; - sha1 = "6b72a8048984e0c41e79510fd5e9fa99b3b549be"; - }; - }; - "readable-stream-1.1.14" = { + "readable-stream-2.3.4" = { name = "readable-stream"; packageName = "readable-stream"; - version = "1.1.14"; + version = "2.3.4"; src = fetchurl { - url = "https://registry.npmjs.org/readable-stream/-/readable-stream-1.1.14.tgz"; - sha1 = "7cf4c54ef648e3813084c636dd2079e166c081d9"; - }; - }; - "readable-stream-2.3.3" = { - name = "readable-stream"; - packageName = "readable-stream"; - version = "2.3.3"; - src = fetchurl { - url = "https://registry.npmjs.org/readable-stream/-/readable-stream-2.3.3.tgz"; - sha512 = "1wlizkv2wnz2nyb0lfxgs1m27zzcvasp3n5cfrd7hm4ch1wn79df2nbhzfadba5qqdfb28vhmw3drhp46vk2q6xk524qagvr76v7slv"; - }; - }; - "readdir-scoped-modules-1.0.2" = { - name = "readdir-scoped-modules"; - packageName = "readdir-scoped-modules"; - version = "1.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/readdir-scoped-modules/-/readdir-scoped-modules-1.0.2.tgz"; - sha1 = "9fafa37d286be5d92cbaebdee030dc9b5f406747"; + url = "https://registry.npmjs.org/readable-stream/-/readable-stream-2.3.4.tgz"; + sha512 = "1jpffi1v0l7pkzrhh8i9c6cbswa9npyx114cbfncfnzl9d7w9p08k9n703hq5xr2c3rg86qiq023sl1x8y6mawgsxgggy8ccrwk3rmy"; }; }; "readdirp-2.1.0" = { @@ -6070,22 +2497,13 @@ let sha1 = "4ed0ad060df3073300c48440373f72d1cc642d78"; }; }; - "recursive-watch-1.1.2" = { + "recursive-watch-1.1.3" = { name = "recursive-watch"; packageName = "recursive-watch"; - version = "1.1.2"; + version = "1.1.3"; src = fetchurl { - url = "https://registry.npmjs.org/recursive-watch/-/recursive-watch-1.1.2.tgz"; - sha1 = "912e2d62a83c8b388d288c4343495f247bc43f8e"; - }; - }; - "regenerator-runtime-0.11.1" = { - name = "regenerator-runtime"; - packageName = "regenerator-runtime"; - version = "0.11.1"; - src = fetchurl { - url = "https://registry.npmjs.org/regenerator-runtime/-/regenerator-runtime-0.11.1.tgz"; - sha512 = "03d4l8l8cyywh93wf5vw84lq56jh1b1d7jll4ny4z060j9hvx7w5q3q0b8q227jm93749k1c9h86r2pz0bm2xq5vp14g3r2kbvqc2rj"; + url = "https://registry.npmjs.org/recursive-watch/-/recursive-watch-1.1.3.tgz"; + sha512 = "3m0s8140jpamg1xxdlsslshx10qznb889s6yc8av6vvqbs56banhmjqy9lgl7g4ppsrsja0d2lhb5lacl3nxm8ggsrpdd7xqf53hvzx"; }; }; "regex-cache-0.4.4" = { @@ -6097,51 +2515,6 @@ let sha512 = "1crfmf19zkv0imnbbkj7bwrcyin3zxa88cs86b6apkxj8qrsmkxnydhsy2ia75q4ld10rhi2s2c36h7g77a997mh9c2z453s311jllx"; }; }; - "regex-escape-3.4.8" = { - name = "regex-escape"; - packageName = "regex-escape"; - version = "3.4.8"; - src = fetchurl { - url = "https://registry.npmjs.org/regex-escape/-/regex-escape-3.4.8.tgz"; - sha512 = "15ylzlxx4y88jldg7cgwv0dmw3ljpq27f9qf17d3g76dqh6ir1ig7dzvqv9nqpr3da1yd2r5ay8jqa6yk7ni5fbbrzgkhf3yha1av8c"; - }; - }; - "registry-auth-token-3.3.1" = { - name = "registry-auth-token"; - packageName = "registry-auth-token"; - version = "3.3.1"; - src = fetchurl { - url = "https://registry.npmjs.org/registry-auth-token/-/registry-auth-token-3.3.1.tgz"; - sha1 = "fb0d3289ee0d9ada2cbb52af5dfe66cb070d3006"; - }; - }; - "registry-url-3.1.0" = { - name = "registry-url"; - packageName = "registry-url"; - version = "3.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/registry-url/-/registry-url-3.1.0.tgz"; - sha1 = "3d4ef870f73dde1d77f0cf9a381432444e174942"; - }; - }; - "remedial-1.0.7" = { - name = "remedial"; - packageName = "remedial"; - version = "1.0.7"; - src = fetchurl { - url = "https://registry.npmjs.org/remedial/-/remedial-1.0.7.tgz"; - sha1 = "d6674413a65676007be00dd400980987b2c300c1"; - }; - }; - "remove-all-except-outer-links-1.0.3" = { - name = "remove-all-except-outer-links"; - packageName = "remove-all-except-outer-links"; - version = "1.0.3"; - src = fetchurl { - url = "https://registry.npmjs.org/remove-all-except-outer-links/-/remove-all-except-outer-links-1.0.3.tgz"; - sha512 = "27mlgakm2rw58mad07fnzfmjk893mr23qqi393b30qsqv2wyng86j0mqn1d06wi2cjzhlcq86zxzz1i3rvd58ajhq71crrm27dyblw7"; - }; - }; "remove-trailing-separator-1.1.0" = { name = "remove-trailing-separator"; packageName = "remove-trailing-separator"; @@ -6151,15 +2524,6 @@ let sha1 = "c24bce2a283adad5bc3f58e0d48249b92379d8ef"; }; }; - "rename-overwrite-1.0.0" = { - name = "rename-overwrite"; - packageName = "rename-overwrite"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/rename-overwrite/-/rename-overwrite-1.0.0.tgz"; - sha1 = "b45a74ceb93d1073e31c5b701c428de5796523d8"; - }; - }; "repeat-element-1.1.2" = { name = "repeat-element"; packageName = "repeat-element"; @@ -6178,15 +2542,6 @@ let sha1 = "8dcae470e1c88abc2d600fff4a776286da75e637"; }; }; - "replace-string-1.1.0" = { - name = "replace-string"; - packageName = "replace-string"; - version = "1.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/replace-string/-/replace-string-1.1.0.tgz"; - sha1 = "87062117f823fe5800c306bacb2cfa359b935fea"; - }; - }; "request-2.81.0" = { name = "request"; packageName = "request"; @@ -6205,24 +2560,6 @@ let sha512 = "0by1djkn836sqd9pk2c777wcjvp34qbk1plx7s4lmykljrblpjc64dvn6ni2vyxsbyk33wnl6avym8vgw0ggr4226xakck8mw7y07cm"; }; }; - "require-directory-2.1.1" = { - name = "require-directory"; - packageName = "require-directory"; - version = "2.1.1"; - src = fetchurl { - url = "https://registry.npmjs.org/require-directory/-/require-directory-2.1.1.tgz"; - sha1 = "8c64ad5fd30dab1c976e2344ffe7f792a6a6df42"; - }; - }; - "require-main-filename-1.0.1" = { - name = "require-main-filename"; - packageName = "require-main-filename"; - version = "1.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/require-main-filename/-/require-main-filename-1.0.1.tgz"; - sha1 = "97f717b69d48784f5f526a6c5aa8ffdda055a4d1"; - }; - }; "resolve-1.1.7" = { name = "resolve"; packageName = "resolve"; @@ -6232,51 +2569,6 @@ let sha1 = "203114d82ad2c5ed9e8e0411b3932875e889e97b"; }; }; - "resolve-from-4.0.0" = { - name = "resolve-from"; - packageName = "resolve-from"; - version = "4.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/resolve-from/-/resolve-from-4.0.0.tgz"; - sha512 = "3i345pdv74jb3xbprqb38xq1zfhsbxzm6b1h0mbcvhfpzz907m4amq35s0spijdj3phs508sha4cnr3incg4w8in4r0kd7ccmicrgx5"; - }; - }; - "resolve-link-target-1.0.1" = { - name = "resolve-link-target"; - packageName = "resolve-link-target"; - version = "1.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/resolve-link-target/-/resolve-link-target-1.0.1.tgz"; - sha512 = "144pdhsw05w6zrwzh2daxd63x0qv6qgf5cimbkbvz9m4ncclp5z9xj6ym5ayhd6xvc2s7pwymj4x439k00czm5jz2h7z1dhgzipf9xs"; - }; - }; - "responselike-1.0.2" = { - name = "responselike"; - packageName = "responselike"; - version = "1.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/responselike/-/responselike-1.0.2.tgz"; - sha1 = "918720ef3b631c5642be068f15ade5a46f4ba1e7"; - }; - }; - "restore-cursor-2.0.0" = { - name = "restore-cursor"; - packageName = "restore-cursor"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/restore-cursor/-/restore-cursor-2.0.0.tgz"; - sha1 = "9f7ee287f82fd326d4fd162923d62129eee0dfaf"; - }; - }; - "retry-0.10.1" = { - name = "retry"; - packageName = "retry"; - version = "0.10.1"; - src = fetchurl { - url = "https://registry.npmjs.org/retry/-/retry-0.10.1.tgz"; - sha1 = "e76388d217992c252750241d3d3956fed98d8ff4"; - }; - }; "revalidator-0.1.8" = { name = "revalidator"; packageName = "revalidator"; @@ -6295,31 +2587,13 @@ let sha512 = "3kmrqh8xli7rzfm8wc6j9lp0c6vml172iv3z088an9xlwl1xvkvh3fn92za66ms4c9yww80qa5kan31k1z1ypqvkchmh1mznb09xdwn"; }; }; - "rimraf-then-1.0.1" = { - name = "rimraf-then"; - packageName = "rimraf-then"; - version = "1.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/rimraf-then/-/rimraf-then-1.0.1.tgz"; - sha1 = "bd4458a79eb561b7548aaec0ac3753ef429fe70b"; - }; - }; - "run-queue-1.0.3" = { - name = "run-queue"; - packageName = "run-queue"; - version = "1.0.3"; - src = fetchurl { - url = "https://registry.npmjs.org/run-queue/-/run-queue-1.0.3.tgz"; - sha1 = "e848396f057d223f24386924618e25694161ec47"; - }; - }; - "rusha-0.8.12" = { + "rusha-0.8.13" = { name = "rusha"; packageName = "rusha"; - version = "0.8.12"; + version = "0.8.13"; src = fetchurl { - url = "https://registry.npmjs.org/rusha/-/rusha-0.8.12.tgz"; - sha1 = "5d838ce1fce8b145674ee771eaad5bcb2575e64b"; + url = "https://registry.npmjs.org/rusha/-/rusha-0.8.13.tgz"; + sha1 = "9a084e7b860b17bff3015b92c67a6a336191513a"; }; }; "safe-buffer-5.1.1" = { @@ -6331,15 +2605,6 @@ let sha512 = "1p28rllll1w65yzq5azi4izx962399xdsdlfbaynn7vmp981hiss05jhiy9hm7sbbfk3b4dhlcv0zy07fc59mnc07hdv6wcgqkcvawh"; }; }; - "sec-1.0.0" = { - name = "sec"; - packageName = "sec"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/sec/-/sec-1.0.0.tgz"; - sha1 = "033d60a3ad20ecf2e00940d14f97823465774335"; - }; - }; "semver-5.3.0" = { name = "semver"; packageName = "semver"; @@ -6349,15 +2614,6 @@ let sha1 = "9b2ce5d3de02d17c6012ad326aa6b4d0cf54f94f"; }; }; - "semver-5.4.1" = { - name = "semver"; - packageName = "semver"; - version = "5.4.1"; - src = fetchurl { - url = "https://registry.npmjs.org/semver/-/semver-5.4.1.tgz"; - sha512 = "2r13vwvb5ick34k6flr7vgbjfsdka8zbj5a74rd0ba4bp0nqmhppbaw3qlwn7f4smpifpa4iy4hxj137y598rbvsmy3h0d8vxgvzwar"; - }; - }; "semver-5.5.0" = { name = "semver"; packageName = "semver"; @@ -6367,24 +2623,6 @@ let sha512 = "0h32zh035y8m6dzcqhcymbhwgmc8839fa1hhj0jfh9ivp9kmqfj1sbwnsnkzcn9qm3sqn38sa8ys2g4c638lpnmzjr0a0qndmv7f8p1"; }; }; - "semver-diff-2.1.0" = { - name = "semver-diff"; - packageName = "semver-diff"; - version = "2.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/semver-diff/-/semver-diff-2.1.0.tgz"; - sha1 = "4bbb8437c8d37e4b0cf1a68fd726ec6d645d6d36"; - }; - }; - "semver-regex-1.0.0" = { - name = "semver-regex"; - packageName = "semver-regex"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/semver-regex/-/semver-regex-1.0.0.tgz"; - sha1 = "92a4969065f9c70c694753d55248fc68f8f652c9"; - }; - }; "set-blocking-2.0.0" = { name = "set-blocking"; packageName = "set-blocking"; @@ -6403,33 +2641,6 @@ let sha1 = "4b2b1b27eb808a9f8dcc481a58e5e56f599f3f61"; }; }; - "sha-2.0.1" = { - name = "sha"; - packageName = "sha"; - version = "2.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/sha/-/sha-2.0.1.tgz"; - sha1 = "6030822fbd2c9823949f8f72ed6411ee5cf25aae"; - }; - }; - "shebang-command-1.2.0" = { - name = "shebang-command"; - packageName = "shebang-command"; - version = "1.2.0"; - src = fetchurl { - url = "https://registry.npmjs.org/shebang-command/-/shebang-command-1.2.0.tgz"; - sha1 = "44aac65b695b03398968c39f363fee5deafdf1ea"; - }; - }; - "shebang-regex-1.0.0" = { - name = "shebang-regex"; - packageName = "shebang-regex"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/shebang-regex/-/shebang-regex-1.0.0.tgz"; - sha1 = "da42f49740c0b42db2ca9728571cb190c98efea3"; - }; - }; "signal-exit-3.0.2" = { name = "signal-exit"; packageName = "signal-exit"; @@ -6448,15 +2659,6 @@ let sha1 = "50a9989da7c98c2c61dad119bc97470ef8528129"; }; }; - "simple-get-1.4.3" = { - name = "simple-get"; - packageName = "simple-get"; - version = "1.4.3"; - src = fetchurl { - url = "https://registry.npmjs.org/simple-get/-/simple-get-1.4.3.tgz"; - sha1 = "e9755eda407e96da40c5e5158c9ea37b33becbeb"; - }; - }; "simple-sha1-2.1.0" = { name = "simple-sha1"; packageName = "simple-sha1"; @@ -6475,15 +2677,6 @@ let sha512 = "17nq5vsq9227bsp0msljjp4lfra2d2f0338xk2z2m1523s3d990appvqrar9j9l3akw6bbjmbw92b9g386fggqiqz76xslvj88q8c4w"; }; }; - "slash-1.0.0" = { - name = "slash"; - packageName = "slash"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/slash/-/slash-1.0.0.tgz"; - sha1 = "c41f2f6c39fc16d1cd17ad4b5d896114ae470d55"; - }; - }; "slasp-0.0.4" = { name = "slasp"; packageName = "slasp"; @@ -6502,24 +2695,6 @@ let sha512 = "1xd3zsk02nck4y601rn98n8cicrphaw5bdix278mk1yizmjv9s0wpa6akcqggd7d99c55s3byf4ylqdxkshyfsfnfx7lvwbmq2b3siw"; }; }; - "slide-1.1.6" = { - name = "slide"; - packageName = "slide"; - version = "1.1.6"; - src = fetchurl { - url = "https://registry.npmjs.org/slide/-/slide-1.1.6.tgz"; - sha1 = "56eb027d65b4d2dce6cb2e2d32c4d4afc9e1d707"; - }; - }; - "smart-buffer-1.1.15" = { - name = "smart-buffer"; - packageName = "smart-buffer"; - version = "1.1.15"; - src = fetchurl { - url = "https://registry.npmjs.org/smart-buffer/-/smart-buffer-1.1.15.tgz"; - sha1 = "7f114b5b65fab3e2a35aa775bb12f0d1c649bf16"; - }; - }; "sntp-1.0.9" = { name = "sntp"; packageName = "sntp"; @@ -6538,24 +2713,6 @@ let sha512 = "0k2smmr24w5hb1cpql6vcgh58vzp4pmh9anf0bgz3arlsgq1mapnlq9fjqr6xs10aq1cmxaw987fwknqi62frax0fvs9bj3q3kmpg8l"; }; }; - "socks-1.1.10" = { - name = "socks"; - packageName = "socks"; - version = "1.1.10"; - src = fetchurl { - url = "https://registry.npmjs.org/socks/-/socks-1.1.10.tgz"; - sha1 = "5b8b7fc7c8f341c53ed056e929b7bf4de8ba7b5a"; - }; - }; - "socks-proxy-agent-3.0.1" = { - name = "socks-proxy-agent"; - packageName = "socks-proxy-agent"; - version = "3.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/socks-proxy-agent/-/socks-proxy-agent-3.0.1.tgz"; - sha512 = "2a5lsw4fry6nqk3jdxvwqrnpasypvl8c4d0kg32912820lc72l7s9jzidfsrn2an9c66xqicspxb2vnir5cjspprs9qklxnd75060b7"; - }; - }; "sodium-javascript-0.5.4" = { name = "sodium-javascript"; packageName = "sodium-javascript"; @@ -6583,15 +2740,6 @@ let sha512 = "2rd6r7v2i3z76rzvllqx9ywk5f64q23944njcf14vv7x3l0illqn41bgdiifik4kswgys99mxsrqinq8akf3n7b15r9871km74mbivj"; }; }; - "sort-keys-2.0.0" = { - name = "sort-keys"; - packageName = "sort-keys"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/sort-keys/-/sort-keys-2.0.0.tgz"; - sha1 = "658535584861ec97d730d6cf41822e1f56684128"; - }; - }; "sorted-array-functions-1.1.0" = { name = "sorted-array-functions"; packageName = "sorted-array-functions"; @@ -6610,33 +2758,6 @@ let sha1 = "17c742ff7cf187e2f59a15df9b81f17a62ce0899"; }; }; - "sorted-object-2.0.1" = { - name = "sorted-object"; - packageName = "sorted-object"; - version = "2.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/sorted-object/-/sorted-object-2.0.1.tgz"; - sha1 = "7d631f4bd3a798a24af1dffcfbfe83337a5df5fc"; - }; - }; - "sorted-union-stream-2.1.3" = { - name = "sorted-union-stream"; - packageName = "sorted-union-stream"; - version = "2.1.3"; - src = fetchurl { - url = "https://registry.npmjs.org/sorted-union-stream/-/sorted-union-stream-2.1.3.tgz"; - sha1 = "c7794c7e077880052ff71a8d4a2dbb4a9a638ac7"; - }; - }; - "source-map-0.6.1" = { - name = "source-map"; - packageName = "source-map"; - version = "0.6.1"; - src = fetchurl { - url = "https://registry.npmjs.org/source-map/-/source-map-0.6.1.tgz"; - sha512 = "3p7hw8p69ikj5mwapmqkacsjnbvdfk5ylyamjg9x5izkl717xvzj0vk3fnmx1n4pf54h5rs7r8ig5kk4jv4ycqqj0hv75cnx6k1lf2j"; - }; - }; "sparse-bitfield-3.0.3" = { name = "sparse-bitfield"; packageName = "sparse-bitfield"; @@ -6646,42 +2767,6 @@ let sha1 = "ff4ae6e68656056ba4b3e792ab3334d38273ca11"; }; }; - "spawno-2.0.7" = { - name = "spawno"; - packageName = "spawno"; - version = "2.0.7"; - src = fetchurl { - url = "https://registry.npmjs.org/spawno/-/spawno-2.0.7.tgz"; - sha512 = "0h8xflvrqwdvz8gadif970wlj5mby4vxhar40h0g96ld6qv6b696msspl89rs2l6n8zv3d9yd5lm85v1g5qk7fpjhqiai2862anzyrc"; - }; - }; - "spdx-correct-1.0.2" = { - name = "spdx-correct"; - packageName = "spdx-correct"; - version = "1.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/spdx-correct/-/spdx-correct-1.0.2.tgz"; - sha1 = "4b3073d933ff51f3912f03ac5519498a4150db40"; - }; - }; - "spdx-expression-parse-1.0.4" = { - name = "spdx-expression-parse"; - packageName = "spdx-expression-parse"; - version = "1.0.4"; - src = fetchurl { - url = "https://registry.npmjs.org/spdx-expression-parse/-/spdx-expression-parse-1.0.4.tgz"; - sha1 = "9bdf2f20e1f40ed447fbe273266191fced51626c"; - }; - }; - "spdx-license-ids-1.2.2" = { - name = "spdx-license-ids"; - packageName = "spdx-license-ids"; - version = "1.2.2"; - src = fetchurl { - url = "https://registry.npmjs.org/spdx-license-ids/-/spdx-license-ids-1.2.2.tgz"; - sha1 = "c9df7a3424594ade6bd11900d596696dc06bac57"; - }; - }; "speedometer-1.0.0" = { name = "speedometer"; packageName = "speedometer"; @@ -6691,24 +2776,6 @@ let sha1 = "cd671cb06752c22bca3370e2f334440be4fc62e2"; }; }; - "split2-2.2.0" = { - name = "split2"; - packageName = "split2"; - version = "2.2.0"; - src = fetchurl { - url = "https://registry.npmjs.org/split2/-/split2-2.2.0.tgz"; - sha512 = "1plzy1n554n2gwfpavi4azb4y45dm2mwj7dq8ma99yg1z55xcdxmkibsfhsh1h19qgsrcamm0ha5qi2c3has6skvx4bix5p67czc1j4"; - }; - }; - "sprintf-js-1.0.3" = { - name = "sprintf-js"; - packageName = "sprintf-js"; - version = "1.0.3"; - src = fetchurl { - url = "https://registry.npmjs.org/sprintf-js/-/sprintf-js-1.0.3.tgz"; - sha1 = "04e6926f662895354f3dd015203633b857297e2c"; - }; - }; "sshpk-1.13.1" = { name = "sshpk"; packageName = "sshpk"; @@ -6718,33 +2785,6 @@ let sha1 = "512df6da6287144316dc4c18fe1cf1d940739be3"; }; }; - "ssri-4.1.6" = { - name = "ssri"; - packageName = "ssri"; - version = "4.1.6"; - src = fetchurl { - url = "https://registry.npmjs.org/ssri/-/ssri-4.1.6.tgz"; - sha512 = "283n1p781cl2pj3jk32blcvwjdlaixng0v5x2f9qi3ndxrmyg3hk4clsjpcfsszkymy40q426yz5skax4ivsmll2p9hhcc00ivc4ijr"; - }; - }; - "ssri-5.0.0" = { - name = "ssri"; - packageName = "ssri"; - version = "5.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/ssri/-/ssri-5.0.0.tgz"; - sha512 = "0g0vz6pdy8f13fqnadimwxx39hq1ix1my6gv0cm308vpv7i06f7gk4ywp7q9aw5sbhrakf86x37ai9fn2y4jvw6lashjw8h5bih6vzg"; - }; - }; - "ssri-5.1.0" = { - name = "ssri"; - packageName = "ssri"; - version = "5.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/ssri/-/ssri-5.1.0.tgz"; - sha512 = "11f7imn7d4s1vs4z45yk8gkis18gbb5qn1z4v5liidy6vwairj5426xciyk10yh3gnxj77bkamzffip8v7v9mjr8ggs8h1iz3qw5ssd"; - }; - }; "stack-trace-0.0.10" = { name = "stack-trace"; packageName = "stack-trace"; @@ -6754,24 +2794,6 @@ let sha1 = "547c70b347e8d32b4e108ea1a2a159e5fdde19c0"; }; }; - "stacktracey-1.2.100" = { - name = "stacktracey"; - packageName = "stacktracey"; - version = "1.2.100"; - src = fetchurl { - url = "https://registry.npmjs.org/stacktracey/-/stacktracey-1.2.100.tgz"; - sha1 = "9e32c7a7fa643eaf69a8f9572361339a8afb6b59"; - }; - }; - "static-methods-1.0.10" = { - name = "static-methods"; - packageName = "static-methods"; - version = "1.0.10"; - src = fetchurl { - url = "https://registry.npmjs.org/static-methods/-/static-methods-1.0.10.tgz"; - sha512 = "2vn92wnri9w5d8san58a7nyyz1ai56gl2qaic9w430bbyyscw98k0a89h3nhk3fkpg9p47hdizwmgp4cnx2g6kxjgk7la5mclk7vb2y"; - }; - }; "status-logger-3.1.1" = { name = "status-logger"; packageName = "status-logger"; @@ -6799,15 +2821,6 @@ let sha512 = "2h4ymczmf5aqldga4sj8acqlzc3almazi2vwiv7kx63k28sz1wwkqgzzv1hn47jf49k1x94w25fmmi001h5mj3n6g9in1s6b1n5vkcr"; }; }; - "stream-iterate-1.2.0" = { - name = "stream-iterate"; - packageName = "stream-iterate"; - version = "1.2.0"; - src = fetchurl { - url = "https://registry.npmjs.org/stream-iterate/-/stream-iterate-1.2.0.tgz"; - sha1 = "2bd7c77296c1702a46488b8ad41f79865eecd4e1"; - }; - }; "stream-parser-0.3.1" = { name = "stream-parser"; packageName = "stream-parser"; @@ -6826,15 +2839,6 @@ let sha1 = "d5c752825e5367e786f78e18e445ea223a155952"; }; }; - "strict-uri-encode-1.1.0" = { - name = "strict-uri-encode"; - packageName = "strict-uri-encode"; - version = "1.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/strict-uri-encode/-/strict-uri-encode-1.1.0.tgz"; - sha1 = "279b225df1d582b1f54e65addd4352e18faa0713"; - }; - }; "string-width-1.0.2" = { name = "string-width"; packageName = "string-width"; @@ -6853,15 +2857,6 @@ let sha512 = "29s1fqgr4mnhfxwczgdghfmmc1f792m9hysvcjxw2h5lfj8ndf2b6gm02m96qk5m75g4aisijvng4pk618anwbr8i9ay2jyszkqgslw"; }; }; - "string_decoder-0.10.31" = { - name = "string_decoder"; - packageName = "string_decoder"; - version = "0.10.31"; - src = fetchurl { - url = "https://registry.npmjs.org/string_decoder/-/string_decoder-0.10.31.tgz"; - sha1 = "62e203bc41766c6c28c9fc84301dab1c5310fa94"; - }; - }; "string_decoder-1.0.3" = { name = "string_decoder"; packageName = "string_decoder"; @@ -6898,33 +2893,6 @@ let sha1 = "a8479022eb1ac368a871389b635262c505ee368f"; }; }; - "strip-bom-3.0.0" = { - name = "strip-bom"; - packageName = "strip-bom"; - version = "3.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/strip-bom/-/strip-bom-3.0.0.tgz"; - sha1 = "2334c18e9c759f7bdd56fdef7e9ae3d588e68ed3"; - }; - }; - "strip-color-0.1.0" = { - name = "strip-color"; - packageName = "strip-color"; - version = "0.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/strip-color/-/strip-color-0.1.0.tgz"; - sha1 = "106f65d3d3e6a2d9401cac0eb0ce8b8a702b4f7b"; - }; - }; - "strip-eof-1.0.0" = { - name = "strip-eof"; - packageName = "strip-eof"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/strip-eof/-/strip-eof-1.0.0.tgz"; - sha1 = "bb43ff5598a6eb05d89b59fcd129c983313606bf"; - }; - }; "strip-json-comments-2.0.1" = { name = "strip-json-comments"; packageName = "strip-json-comments"; @@ -6943,33 +2911,6 @@ let sha1 = "5e4ceca5a3779e3365b1511e05f866877302f760"; }; }; - "supi-0.12.1" = { - name = "supi"; - packageName = "supi"; - version = "0.12.1"; - src = fetchurl { - url = "https://registry.npmjs.org/supi/-/supi-0.12.1.tgz"; - sha512 = "1fb6fkng687rhx89agz3mqa854p424b8nwj1ix6ckfv40gnkz3saydxs0di4nildpccn2rgwf01flxk922pj2rap6wqg8fdr2c8crz7"; - }; - }; - "supports-color-2.0.0" = { - name = "supports-color"; - packageName = "supports-color"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/supports-color/-/supports-color-2.0.0.tgz"; - sha1 = "535d045ce6b6363fa40117084629995e9df324c7"; - }; - }; - "supports-color-3.2.3" = { - name = "supports-color"; - packageName = "supports-color"; - version = "3.2.3"; - src = fetchurl { - url = "https://registry.npmjs.org/supports-color/-/supports-color-3.2.3.tgz"; - sha1 = "65ac0504b3954171d8a64946b2ae3cbb8a5f54f6"; - }; - }; "supports-color-4.4.0" = { name = "supports-color"; packageName = "supports-color"; @@ -6979,31 +2920,13 @@ let sha512 = "1flwwfdd7gg94xrc0b2ard3qjx4cpy600q49gx43y8pzvs7j56q78bjhv8mk18vgbggr4fd11jda8ck5cdrkc5jcjs04nlp7kwbg85c"; }; }; - "supports-color-4.5.0" = { + "supports-color-5.2.0" = { name = "supports-color"; packageName = "supports-color"; - version = "4.5.0"; + version = "5.2.0"; src = fetchurl { - url = "https://registry.npmjs.org/supports-color/-/supports-color-4.5.0.tgz"; - sha1 = "be7a0de484dec5c5cddf8b3d59125044912f635b"; - }; - }; - "symbol-observable-1.1.0" = { - name = "symbol-observable"; - packageName = "symbol-observable"; - version = "1.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/symbol-observable/-/symbol-observable-1.1.0.tgz"; - sha512 = "19pk4fk1ddq50all5c15bb58iwchzck5lvmsvlx5va17sfrq89pda0qrrnlma34m1kzay4q3k3ghmfp32hlqvk8njlfnhvavdvj42km"; - }; - }; - "symlink-dir-1.1.2" = { - name = "symlink-dir"; - packageName = "symlink-dir"; - version = "1.1.2"; - src = fetchurl { - url = "https://registry.npmjs.org/symlink-dir/-/symlink-dir-1.1.2.tgz"; - sha512 = "2bzpdrkxnd1iysdlc7n6i5pqwqm98s2m2srfp9br9872qdvv8pbnm3i7r27rqxbad6pypj2lzhkxf8zghfzp3psl9psk9bkbp02yw8r"; + url = "https://registry.npmjs.org/supports-color/-/supports-color-5.2.0.tgz"; + sha512 = "3jqwn02aw7bczn3f56mfbx3nvhrydwsc6g9vkp54794rfdg61vbp3qy4vdj1n8jvpahlcywpcv0afxjxbj5a3wm9lpqcsr5ix5nyzqp"; }; }; "tar-2.2.1" = { @@ -7015,24 +2938,6 @@ let sha1 = "8e4d2a256c0e2185c6b18ad694aec968b83cb1d1"; }; }; - "tar-4.0.2" = { - name = "tar"; - packageName = "tar"; - version = "4.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/tar/-/tar-4.0.2.tgz"; - sha512 = "1mm9s6jly4lwfv9cak7kpiagqx3j6n1dh50k7nlnqy761ckfvn394asfgq1vdnxpjr164h5ybgcfysr8wgm70bwd0y3qnq4w3i8smg2"; - }; - }; - "tar-fs-1.16.0" = { - name = "tar-fs"; - packageName = "tar-fs"; - version = "1.16.0"; - src = fetchurl { - url = "https://registry.npmjs.org/tar-fs/-/tar-fs-1.16.0.tgz"; - sha512 = "1i39d75rgrl2a3v3x65w7bz6az06sg7xdvp7j9zk5bqilj5znclmr7r5n9l6la6nkqikn4lkhnfrgp4hzbvp6ph77nn53g6zvmdpni3"; - }; - }; "tar-pack-3.4.1" = { name = "tar-pack"; packageName = "tar-pack"; @@ -7042,60 +2947,6 @@ let sha512 = "0mgk8jd55vr7i3i29r1skhxwwbqkqfz6mbr32r5nn8h6v5xns8d2rc7835y7wj0zmppckxai7nm8r4s65kkg6yhirnwx33yixn75x1w"; }; }; - "tar-stream-1.5.5" = { - name = "tar-stream"; - packageName = "tar-stream"; - version = "1.5.5"; - src = fetchurl { - url = "https://registry.npmjs.org/tar-stream/-/tar-stream-1.5.5.tgz"; - sha512 = "219gn10gvilrq6h3yshbhn25fx46n0wlgg66h0v326jhzz8gmpxsinb8bnhx1py35z0cv2248v91k2vy6vmkajmvpmkfmizywn601wr"; - }; - }; - "tasklist-3.1.0" = { - name = "tasklist"; - packageName = "tasklist"; - version = "3.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/tasklist/-/tasklist-3.1.0.tgz"; - sha1 = "873a98a4e45cbdecfa2c2ee18865353057e63696"; - }; - }; - "term-size-1.2.0" = { - name = "term-size"; - packageName = "term-size"; - version = "1.2.0"; - src = fetchurl { - url = "https://registry.npmjs.org/term-size/-/term-size-1.2.0.tgz"; - sha1 = "458b83887f288fc56d6fffbfad262e26638efa69"; - }; - }; - "text-table-0.2.0" = { - name = "text-table"; - packageName = "text-table"; - version = "0.2.0"; - src = fetchurl { - url = "https://registry.npmjs.org/text-table/-/text-table-0.2.0.tgz"; - sha1 = "7f5ee823ae805207c00af2df4a84ec3fcfa570b4"; - }; - }; - "thenify-3.3.0" = { - name = "thenify"; - packageName = "thenify"; - version = "3.3.0"; - src = fetchurl { - url = "https://registry.npmjs.org/thenify/-/thenify-3.3.0.tgz"; - sha1 = "e69e38a1babe969b0108207978b9f62b88604839"; - }; - }; - "thenify-all-1.6.0" = { - name = "thenify-all"; - packageName = "thenify-all"; - version = "1.6.0"; - src = fetchurl { - url = "https://registry.npmjs.org/thenify-all/-/thenify-all-1.6.0.tgz"; - sha1 = "1a1918d402d8fc3f98fbf234db0bcc8cc10e9726"; - }; - }; "throttle-1.0.3" = { name = "throttle"; packageName = "throttle"; @@ -7105,15 +2956,6 @@ let sha1 = "8a32e4a15f1763d997948317c5ebe3ad8a41e4b7"; }; }; - "through-2.3.8" = { - name = "through"; - packageName = "through"; - version = "2.3.8"; - src = fetchurl { - url = "https://registry.npmjs.org/through/-/through-2.3.8.tgz"; - sha1 = "0dd4c9ffaabc357960b1b724115d7e0e86a2e1f5"; - }; - }; "through2-2.0.3" = { name = "through2"; packageName = "through2"; @@ -7141,24 +2983,6 @@ let sha1 = "a862e018e3fb1ea2ec3fce5d55605cf57f247371"; }; }; - "timed-out-4.0.1" = { - name = "timed-out"; - packageName = "timed-out"; - version = "4.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/timed-out/-/timed-out-4.0.1.tgz"; - sha1 = "f32eacac5a175bea25d7fab565ab3ed8741ef56f"; - }; - }; - "timeout-then-1.1.0" = { - name = "timeout-then"; - packageName = "timeout-then"; - version = "1.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/timeout-then/-/timeout-then-1.1.0.tgz"; - sha1 = "0145b06070159c17e2146fd292b01a1bd81e5fbc"; - }; - }; "to-buffer-1.1.0" = { name = "to-buffer"; packageName = "to-buffer"; @@ -7177,13 +3001,13 @@ let sha512 = "0c9ayp39hvxd1lzl6cxvsxcys0jzfb698i3as3xrw3n9zpxwmx4sqwisv63bfsmdl10c6v4inpj5kvckhlr3nd3ny1pj264r0qags0l"; }; }; - "tough-cookie-2.3.3" = { + "tough-cookie-2.3.4" = { name = "tough-cookie"; packageName = "tough-cookie"; - version = "2.3.3"; + version = "2.3.4"; src = fetchurl { - url = "https://registry.npmjs.org/tough-cookie/-/tough-cookie-2.3.3.tgz"; - sha1 = "0b618a5565b6dea90bf3425d04d55edc475a7561"; + url = "https://registry.npmjs.org/tough-cookie/-/tough-cookie-2.3.4.tgz"; + sha512 = "0ncm6j3cjq1f26mzjf04k9bkw1b08w53s4qa3a11c1bdj4pgnqv1422c1xs5jyy6y1psppjx52fhagq5zkjkgrcpdkxcdiry96r77jd"; }; }; "township-client-1.3.2" = { @@ -7195,15 +3019,6 @@ let sha512 = "3da1j7ba37apy5kqlv436dz265b8ni63ca069gy4wrj9krq236j7sp0r259ia6jk1a8d7qqg37kkk8kwmnaqwcy90wnwnjxxp8bnf78"; }; }; - "tree-kill-1.2.0" = { - name = "tree-kill"; - packageName = "tree-kill"; - version = "1.2.0"; - src = fetchurl { - url = "https://registry.npmjs.org/tree-kill/-/tree-kill-1.2.0.tgz"; - sha512 = "1r0mixygpdqrm2fn92z4cyxzbnvimm16k5gdm2m2jxx8wrj3w0mql9s748hcqp2nzcnybnw74wkm211zlr9ld0j2x1q8f153mszlm8f"; - }; - }; "trim-0.0.1" = { name = "trim"; packageName = "trim"; @@ -7249,24 +3064,6 @@ let sha1 = "867ac74e3864187b1d3d47d996a78ec5c8830777"; }; }; - "typpy-2.0.0" = { - name = "typpy"; - packageName = "typpy"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/typpy/-/typpy-2.0.0.tgz"; - sha1 = "adef3bacc12ff47aff920fab03a8ff3279d737d6"; - }; - }; - "typpy-2.3.10" = { - name = "typpy"; - packageName = "typpy"; - version = "2.3.10"; - src = fetchurl { - url = "https://registry.npmjs.org/typpy/-/typpy-2.3.10.tgz"; - sha512 = "2m116608xyx0v7pl2hwvw0z7gw1yyxqx7yhp0l3a2nxrlsn7xav33rnys72xrc6jr0dwsg0r71f7qj42pdzgza15fz8l5wphycr5a0c"; - }; - }; "uid-number-0.0.6" = { name = "uid-number"; packageName = "uid-number"; @@ -7285,69 +3082,6 @@ let sha1 = "a310d94e4e5e0b02a95d678e33323f802bdc8428"; }; }; - "ul-5.0.0" = { - name = "ul"; - packageName = "ul"; - version = "5.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/ul/-/ul-5.0.0.tgz"; - sha1 = "ca80d793025f3fd5dc9bf83469818d310a7c9a62"; - }; - }; - "ul-5.2.13" = { - name = "ul"; - packageName = "ul"; - version = "5.2.13"; - src = fetchurl { - url = "https://registry.npmjs.org/ul/-/ul-5.2.13.tgz"; - sha1 = "9ff0504ea35ca1f74c0bf59e6480def009bad7b5"; - }; - }; - "umask-1.1.0" = { - name = "umask"; - packageName = "umask"; - version = "1.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/umask/-/umask-1.1.0.tgz"; - sha1 = "f29cebf01df517912bb58ff9c4e50fde8e33320d"; - }; - }; - "unbzip2-stream-1.2.5" = { - name = "unbzip2-stream"; - packageName = "unbzip2-stream"; - version = "1.2.5"; - src = fetchurl { - url = "https://registry.npmjs.org/unbzip2-stream/-/unbzip2-stream-1.2.5.tgz"; - sha512 = "0xgvidx384p6cc8zh4m0qq000cn140dsckkijf95ka6iqi9j5nsrjrrf3mr3gxnybcvf2l4hxkaf0j7cqxncm3lnpq4ripw2j7zfc4b"; - }; - }; - "unique-filename-1.1.0" = { - name = "unique-filename"; - packageName = "unique-filename"; - version = "1.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/unique-filename/-/unique-filename-1.1.0.tgz"; - sha1 = "d05f2fe4032560871f30e93cbe735eea201514f3"; - }; - }; - "unique-slug-2.0.0" = { - name = "unique-slug"; - packageName = "unique-slug"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/unique-slug/-/unique-slug-2.0.0.tgz"; - sha1 = "db6676e7c7cc0629878ff196097c78855ae9f4ab"; - }; - }; - "unique-string-1.0.0" = { - name = "unique-string"; - packageName = "unique-string"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/unique-string/-/unique-string-1.0.0.tgz"; - sha1 = "9e1057cca851abb93398f8b33ae187b99caec11a"; - }; - }; "unixify-1.0.0" = { name = "unixify"; packageName = "unixify"; @@ -7384,24 +3118,6 @@ let sha1 = "985a27e975baa20b8263aea7a791e9300941a9ec"; }; }; - "unpack-stream-3.0.1" = { - name = "unpack-stream"; - packageName = "unpack-stream"; - version = "3.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/unpack-stream/-/unpack-stream-3.0.1.tgz"; - sha512 = "3m37z48fshadh46ay1hibdw9fawz3rgx1c16wx63mgplka0bs71364xnn72awwzc83dns0gkhnv3slmk071k1mdrm1bzvbi8z1br8f9"; - }; - }; - "unpipe-1.0.0" = { - name = "unpipe"; - packageName = "unpipe"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/unpipe/-/unpipe-1.0.0.tgz"; - sha1 = "b2bf4ee8514aae6165b4817829d21b2ef49904ec"; - }; - }; "untildify-3.0.2" = { name = "untildify"; packageName = "untildify"; @@ -7411,69 +3127,6 @@ let sha1 = "7f1f302055b3fea0f3e81dc78eb36766cb65e3f1"; }; }; - "unzip-response-1.0.2" = { - name = "unzip-response"; - packageName = "unzip-response"; - version = "1.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/unzip-response/-/unzip-response-1.0.2.tgz"; - sha1 = "b984f0877fc0a89c2c773cc1ef7b5b232b5b06fe"; - }; - }; - "unzip-response-2.0.1" = { - name = "unzip-response"; - packageName = "unzip-response"; - version = "2.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/unzip-response/-/unzip-response-2.0.1.tgz"; - sha1 = "d2f0f737d16b0615e72a6935ed04214572d56f97"; - }; - }; - "update-notifier-2.2.0" = { - name = "update-notifier"; - packageName = "update-notifier"; - version = "2.2.0"; - src = fetchurl { - url = "https://registry.npmjs.org/update-notifier/-/update-notifier-2.2.0.tgz"; - sha1 = "1b5837cf90c0736d88627732b661c138f86de72f"; - }; - }; - "update-notifier-2.3.0" = { - name = "update-notifier"; - packageName = "update-notifier"; - version = "2.3.0"; - src = fetchurl { - url = "https://registry.npmjs.org/update-notifier/-/update-notifier-2.3.0.tgz"; - sha1 = "4e8827a6bb915140ab093559d7014e3ebb837451"; - }; - }; - "url-parse-lax-1.0.0" = { - name = "url-parse-lax"; - packageName = "url-parse-lax"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/url-parse-lax/-/url-parse-lax-1.0.0.tgz"; - sha1 = "7af8f303645e9bd79a272e7a14ac68bc0609da73"; - }; - }; - "url-parse-lax-3.0.0" = { - name = "url-parse-lax"; - packageName = "url-parse-lax"; - version = "3.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/url-parse-lax/-/url-parse-lax-3.0.0.tgz"; - sha1 = "16b5cafc07dbe3676c1b1999177823d6503acb0c"; - }; - }; - "url-to-options-1.0.1" = { - name = "url-to-options"; - packageName = "url-to-options"; - version = "1.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/url-to-options/-/url-to-options-1.0.1.tgz"; - sha1 = "1505a03a289a48cbd7a434efbaeec5055f5633a9"; - }; - }; "util-deprecate-1.0.2" = { name = "util-deprecate"; packageName = "util-deprecate"; @@ -7483,24 +3136,6 @@ let sha1 = "450d4dc9fa70de732762fbd2d4a28981419a0ccf"; }; }; - "util-extend-1.0.3" = { - name = "util-extend"; - packageName = "util-extend"; - version = "1.0.3"; - src = fetchurl { - url = "https://registry.npmjs.org/util-extend/-/util-extend-1.0.3.tgz"; - sha1 = "a7c216d267545169637b3b6edc6ca9119e2ff93f"; - }; - }; - "util.promisify-1.0.0" = { - name = "util.promisify"; - packageName = "util.promisify"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/util.promisify/-/util.promisify-1.0.0.tgz"; - sha512 = "28cvjkydplc2vpnqff8vylscx8851srnkl54y6i54pl6lhpr6548plvyj833jk2mfaf8h31gbn60s00azd28rzc5q5gm1hgcc1smvlb"; - }; - }; "utile-0.3.0" = { name = "utile"; packageName = "utile"; @@ -7519,15 +3154,6 @@ let sha512 = "2mcnn6w5as2dvz6rj4fb33174z3a1rl9bm2cfazrr4084gq7aal0bkmkwr1cjpkvy1zgni3zdk0570fx7cmnd0k0hg18wfb2hvbigfg"; }; }; - "uuid-3.1.0" = { - name = "uuid"; - packageName = "uuid"; - version = "3.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/uuid/-/uuid-3.1.0.tgz"; - sha512 = "3x5mi85l1559nkb35pfksjjgiyfyqrcvmcf0nly1xjl1kb0d37jnxd6sk0b8d331waadnqbf60nfssb563x9pvnjcw87lrh976sv18c"; - }; - }; "uuid-3.2.1" = { name = "uuid"; packageName = "uuid"; @@ -7537,24 +3163,6 @@ let sha512 = "0843vl1c974n8kw5kn0kvhvhwk8y8jydr0xkwwl2963xxmkw4ingk6xj9c8m48jw2i95giglxzq5aw5v5mij9kv7fzln8pxav1cr6cd"; }; }; - "validate-npm-package-license-3.0.1" = { - name = "validate-npm-package-license"; - packageName = "validate-npm-package-license"; - version = "3.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/validate-npm-package-license/-/validate-npm-package-license-3.0.1.tgz"; - sha1 = "2804babe712ad3379459acfbe24746ab2c303fbc"; - }; - }; - "validate-npm-package-name-3.0.0" = { - name = "validate-npm-package-name"; - packageName = "validate-npm-package-name"; - version = "3.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/validate-npm-package-name/-/validate-npm-package-name-3.0.0.tgz"; - sha1 = "5fa912d81eb7d0c74afc140de7317f0ca7df437e"; - }; - }; "varint-3.0.1" = { name = "varint"; packageName = "varint"; @@ -7591,24 +3199,6 @@ let sha1 = "3a105ca17053af55d6e270c1f8288682e18da400"; }; }; - "version-selector-type-2.0.0" = { - name = "version-selector-type"; - packageName = "version-selector-type"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/version-selector-type/-/version-selector-type-2.0.0.tgz"; - sha512 = "3n7bidjd5r4lph1qq3sz6kyjk3isb2hjvvaccsqqsspphm2in151xgga6lzjimydbvl9a6cr9jy8q06qdgvalq4nxyggs1v49i150qm"; - }; - }; - "wcwidth-1.0.1" = { - name = "wcwidth"; - packageName = "wcwidth"; - version = "1.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/wcwidth/-/wcwidth-1.0.1.tgz"; - sha1 = "f0b0dcf915bc5ff1528afadb2c0e17b532da2fe8"; - }; - }; "which-1.3.0" = { name = "which"; packageName = "which"; @@ -7618,15 +3208,6 @@ let sha512 = "358cfi3qak701qp5pwkq47n87ca4m8k4lvjl0pdybvmp92nwwd7azzhahy9gy3kg8lqrqdry9l6pl2csflzr0nvwnc3p6asjyi6khn5"; }; }; - "which-module-2.0.0" = { - name = "which-module"; - packageName = "which-module"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/which-module/-/which-module-2.0.0.tgz"; - sha1 = "d9ef07dce77b9902b8a3a8fa4b31c3e3f7e6e87a"; - }; - }; "wide-align-1.1.2" = { name = "wide-align"; packageName = "wide-align"; @@ -7636,15 +3217,6 @@ let sha512 = "39m5b8qc31vxhh0bz14vh9a1kf9znarvlpkf0v6vv1f2dxi61gihav2djq2mn7ns1z3yq6l8pyydj52fyzbm2q04rssrcrv4jbwnc4a"; }; }; - "widest-line-2.0.0" = { - name = "widest-line"; - packageName = "widest-line"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/widest-line/-/widest-line-2.0.0.tgz"; - sha1 = "0142a4e8a243f8882c0233aa0e0281aa76152273"; - }; - }; "winston-2.1.1" = { name = "winston"; packageName = "winston"; @@ -7654,24 +3226,6 @@ let sha1 = "3c9349d196207fd1bdff9d4bc43ef72510e3a12e"; }; }; - "worker-farm-1.5.2" = { - name = "worker-farm"; - packageName = "worker-farm"; - version = "1.5.2"; - src = fetchurl { - url = "https://registry.npmjs.org/worker-farm/-/worker-farm-1.5.2.tgz"; - sha512 = "28xgfshjpa79hz7v39axfrfnjhhjl371w30vy7dhs0kdzsdd42xi8lz85yjs2m0fp481iydiwscsy61gr99igkmkak7xrjd8vv9062z"; - }; - }; - "wrap-ansi-2.1.0" = { - name = "wrap-ansi"; - packageName = "wrap-ansi"; - version = "2.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/wrap-ansi/-/wrap-ansi-2.1.0.tgz"; - sha1 = "d8fc3d284dd05794fe84973caecdd1cf824fdd85"; - }; - }; "wrap-ansi-3.0.1" = { name = "wrap-ansi"; packageName = "wrap-ansi"; @@ -7690,78 +3244,6 @@ let sha1 = "b5243d8f3ec1aa35f1364605bc0d1036e30ab69f"; }; }; - "write-file-atomic-1.3.4" = { - name = "write-file-atomic"; - packageName = "write-file-atomic"; - version = "1.3.4"; - src = fetchurl { - url = "https://registry.npmjs.org/write-file-atomic/-/write-file-atomic-1.3.4.tgz"; - sha1 = "f807a4f0b1d9e913ae7a48112e6cc3af1991b45f"; - }; - }; - "write-file-atomic-2.1.0" = { - name = "write-file-atomic"; - packageName = "write-file-atomic"; - version = "2.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/write-file-atomic/-/write-file-atomic-2.1.0.tgz"; - sha512 = "0jpbx5znf640m7icywa21hdgyss5h6c811z27mzk7mh1yhv8sqcqd2y0cwgkrnigx57k2chv5cqwv0z8ff8z32gpdw8jw5imz8pcdni"; - }; - }; - "write-file-atomic-2.3.0" = { - name = "write-file-atomic"; - packageName = "write-file-atomic"; - version = "2.3.0"; - src = fetchurl { - url = "https://registry.npmjs.org/write-file-atomic/-/write-file-atomic-2.3.0.tgz"; - sha512 = "2sgqxmcqzjd7nq9gjh6jz7vfb0gs0ag4jvqzdq93afq3bw3jrm88mhxql9sryyb04f3ipw5jkgjfiigsmdwlz9fgsnnm3cxhcmxxqy6"; - }; - }; - "write-json-file-2.3.0" = { - name = "write-json-file"; - packageName = "write-json-file"; - version = "2.3.0"; - src = fetchurl { - url = "https://registry.npmjs.org/write-json-file/-/write-json-file-2.3.0.tgz"; - sha1 = "2b64c8a33004d54b8698c76d585a77ceb61da32f"; - }; - }; - "write-pkg-3.1.0" = { - name = "write-pkg"; - packageName = "write-pkg"; - version = "3.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/write-pkg/-/write-pkg-3.1.0.tgz"; - sha1 = "030a9994cc9993d25b4e75a9f1a1923607291ce9"; - }; - }; - "write-yaml-file-1.0.0" = { - name = "write-yaml-file"; - packageName = "write-yaml-file"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/write-yaml-file/-/write-yaml-file-1.0.0.tgz"; - sha1 = "7b4bd0df72ca13fbe9d6b0178fd83c077b8ea86b"; - }; - }; - "x256-0.0.2" = { - name = "x256"; - packageName = "x256"; - version = "0.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/x256/-/x256-0.0.2.tgz"; - sha1 = "c9af18876f7a175801d564fe70ad9e8317784934"; - }; - }; - "xdg-basedir-3.0.0" = { - name = "xdg-basedir"; - packageName = "xdg-basedir"; - version = "3.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/xdg-basedir/-/xdg-basedir-3.0.0.tgz"; - sha1 = "496b2cc109eca8dbacfe2dc72b603c17c5870ad4"; - }; - }; "xhr-2.4.1" = { name = "xhr"; packageName = "xhr"; @@ -7789,69 +3271,6 @@ let sha1 = "a5c6d532be656e23db820efb943a1f04998d63af"; }; }; - "y18n-3.2.1" = { - name = "y18n"; - packageName = "y18n"; - version = "3.2.1"; - src = fetchurl { - url = "https://registry.npmjs.org/y18n/-/y18n-3.2.1.tgz"; - sha1 = "6d15fba884c08679c0d77e88e7759e811e07fa41"; - }; - }; - "yallist-2.1.2" = { - name = "yallist"; - packageName = "yallist"; - version = "2.1.2"; - src = fetchurl { - url = "https://registry.npmjs.org/yallist/-/yallist-2.1.2.tgz"; - sha1 = "1c11f9218f076089a47dd512f93c6699a6a81d52"; - }; - }; - "yallist-3.0.2" = { - name = "yallist"; - packageName = "yallist"; - version = "3.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/yallist/-/yallist-3.0.2.tgz"; - sha1 = "8452b4bb7e83c7c188d8041c1a837c773d6d8bb9"; - }; - }; - "yargs-8.0.2" = { - name = "yargs"; - packageName = "yargs"; - version = "8.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/yargs/-/yargs-8.0.2.tgz"; - sha1 = "6299a9055b1cefc969ff7e79c1d918dceb22c360"; - }; - }; - "yargs-parser-7.0.0" = { - name = "yargs-parser"; - packageName = "yargs-parser"; - version = "7.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/yargs-parser/-/yargs-parser-7.0.0.tgz"; - sha1 = "8d0ac42f16ea55debd332caf4c4038b3e3f5dfd9"; - }; - }; - "zen-observable-0.7.1" = { - name = "zen-observable"; - packageName = "zen-observable"; - version = "0.7.1"; - src = fetchurl { - url = "https://registry.npmjs.org/zen-observable/-/zen-observable-0.7.1.tgz"; - sha512 = "134nwk2ggcx46rx0n2cy1fqmlixar7c4sygxkym7kpd8wkqvdnlg1win4kns4zcxx99mxmbpr57jppq8bkva5z2ladfmjdl4wqrb3iq"; - }; - }; - "zen-push-0.2.1" = { - name = "zen-push"; - packageName = "zen-push"; - version = "0.2.1"; - src = fetchurl { - url = "https://registry.npmjs.org/zen-push/-/zen-push-0.2.1.tgz"; - sha512 = "3bx83jgamf9vq3n0150j5h8ndbxck5psnhw21fwifmq7jz37vcmlm7wmirbxh824jhq3kv16lc4h6iki1kwxx0zsjwyf8hrryyjmzj2"; - }; - }; }; in { @@ -7930,20 +3349,19 @@ in sources."blake2b-wasm-1.1.7" sources."body-0.1.0" sources."boom-4.3.1" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" (sources."braces-1.8.5" // { dependencies = [ sources."kind-of-4.0.0" ]; }) - sources."buffer-alloc-unsafe-1.0.0" sources."buffer-equals-1.0.4" sources."buffer-indexof-1.1.1" sources."bulk-write-stream-1.1.3" sources."bytes-3.0.0" sources."call-me-maybe-1.0.1" sources."caseless-0.12.0" - sources."chalk-2.3.0" + sources."chalk-2.3.1" sources."cli-truncate-1.1.0" sources."cliclopts-1.1.1" sources."co-4.6.0" @@ -7951,7 +3369,7 @@ in sources."color-convert-1.9.1" sources."color-name-1.1.3" sources."colors-1.1.2" - sources."combined-stream-1.0.5" + sources."combined-stream-1.0.6" sources."concat-map-0.0.1" sources."concat-stream-1.6.0" sources."connections-1.4.2" @@ -7986,18 +3404,23 @@ in sources."debug-2.6.9" ]; }) - sources."dat-log-1.1.1" - (sources."dat-node-3.5.6" // { + (sources."dat-log-1.1.1" // { + dependencies = [ + sources."process-nextick-args-1.0.7" + ]; + }) + (sources."dat-node-3.5.8" // { dependencies = [ sources."minimist-0.0.8" + sources."process-nextick-args-1.0.7" sources."pump-1.0.3" sources."unordered-set-2.0.0" sources."varint-5.0.0" ]; }) sources."dat-registry-4.0.0" - sources."dat-secret-storage-4.0.0" - sources."dat-storage-1.0.3" + sources."dat-secret-storage-4.0.1" + sources."dat-storage-1.0.4" sources."dat-swarm-defaults-1.0.0" sources."datland-swarm-defaults-1.0.2" sources."debug-3.1.0" @@ -8010,11 +3433,7 @@ in sources."thunky-0.1.0" ]; }) - (sources."dns-discovery-5.6.1" // { - dependencies = [ - sources."thunky-0.1.0" - ]; - }) + sources."dns-discovery-5.6.1" sources."dns-packet-1.3.1" sources."dns-socket-1.6.3" sources."dns-txt-2.0.2" @@ -8029,7 +3448,7 @@ in sources."extglob-0.3.2" sources."extsprintf-1.3.0" sources."eyes-0.1.8" - sources."fast-deep-equal-1.0.0" + sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."fd-read-stream-1.1.0" sources."filename-regex-2.0.1" @@ -8039,7 +3458,7 @@ in sources."for-in-1.0.2" sources."for-own-0.1.5" sources."forever-agent-0.6.1" - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."from2-2.3.0" sources."fs.realpath-1.0.0" sources."getpass-0.1.7" @@ -8049,28 +3468,24 @@ in sources."global-4.3.2" sources."har-schema-2.0.0" sources."har-validator-5.0.3" - sources."has-flag-2.0.0" + sources."has-flag-3.0.0" sources."hawk-6.0.2" - sources."hoek-4.2.0" + sources."hoek-4.2.1" sources."http-methods-0.1.0" sources."http-signature-1.2.0" - (sources."hypercore-6.12.0" // { + (sources."hypercore-6.12.2" // { dependencies = [ sources."varint-5.0.0" ]; }) sources."hypercore-protocol-6.5.2" - (sources."hyperdrive-9.12.2" // { + (sources."hyperdrive-9.12.3" // { dependencies = [ sources."varint-4.0.1" ]; }) sources."hyperdrive-http-4.2.2" - (sources."hyperdrive-network-speed-2.0.1" // { - dependencies = [ - sources."debug-2.6.9" - ]; - }) + sources."hyperdrive-network-speed-2.1.0" sources."i-0.3.6" sources."inflight-1.0.6" sources."inherits-2.0.3" @@ -8111,8 +3526,8 @@ in sources."merkle-tree-stream-3.0.3" sources."micromatch-2.3.11" sources."mime-1.6.0" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."min-document-2.19.0" sources."minimatch-3.0.4" sources."minimist-1.2.0" @@ -8120,11 +3535,11 @@ in sources."mkdirp-0.5.1" sources."ms-2.0.0" sources."multi-random-access-2.1.1" - sources."multicast-dns-6.2.2" + sources."multicast-dns-6.2.3" sources."multicb-1.2.2" sources."mute-stream-0.0.7" sources."mutexify-1.2.0" - sources."nan-2.8.0" + sources."nan-2.9.2" sources."nanoassert-1.1.0" sources."nanobus-3.3.0" sources."nanotiming-1.0.1" @@ -8151,7 +3566,7 @@ in sources."prettier-bytes-1.0.4" sources."pretty-hash-1.0.1" sources."process-0.5.2" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."progress-string-1.2.2" (sources."prompt-1.0.0" // { dependencies = [ @@ -8162,12 +3577,9 @@ in sources."pump-2.0.1" sources."punycode-1.4.1" sources."qs-6.5.1" - (sources."random-access-file-1.8.1" // { - dependencies = [ - sources."debug-2.6.9" - ]; - }) + sources."random-access-file-2.0.1" sources."random-access-memory-2.4.0" + sources."random-access-storage-1.1.1" (sources."randomatic-1.1.7" // { dependencies = [ (sources."is-number-3.0.0" // { @@ -8180,8 +3592,8 @@ in sources."randombytes-2.0.6" sources."range-parser-1.2.0" sources."read-1.0.7" - sources."readable-stream-2.3.3" - sources."recursive-watch-1.1.2" + sources."readable-stream-2.3.4" + sources."recursive-watch-1.1.3" sources."regex-cache-0.4.4" sources."remove-trailing-separator-1.1.0" sources."repeat-element-1.1.2" @@ -8189,7 +3601,7 @@ in sources."request-2.83.0" sources."revalidator-0.1.8" sources."rimraf-2.6.2" - sources."rusha-0.8.12" + sources."rusha-0.8.13" sources."safe-buffer-5.1.1" sources."signed-varint-2.0.1" sources."simple-sha1-2.1.0" @@ -8219,7 +3631,7 @@ in sources."debug-2.6.9" ]; }) - sources."supports-color-4.5.0" + sources."supports-color-5.2.0" (sources."throttle-1.0.3" // { dependencies = [ sources."debug-2.6.9" @@ -8229,7 +3641,7 @@ in sources."thunky-1.0.2" sources."to-buffer-1.1.0" sources."toiletdb-1.4.1" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."township-client-1.3.2" sources."trim-0.0.1" sources."ttl-1.3.1" @@ -8279,7 +3691,7 @@ in dependencies = [ sources."abbrev-1.1.1" sources."balanced-match-1.0.0" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."concat-map-0.0.1" sources."findup-sync-0.3.0" sources."glob-5.0.15" @@ -8305,14 +3717,14 @@ in mocha = nodeEnv.buildNodePackage { name = "mocha"; packageName = "mocha"; - version = "5.0.0"; + version = "5.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/mocha/-/mocha-5.0.0.tgz"; - sha512 = "3rxvm15qz9qdiyihc9pq4kc008iz89cqdqjlca43swmk3fc7bydlaqk1qyhaj19r5m8cxxrpiwxz5cwrp9im26fin4sgqdfbxs7ch5s"; + url = "https://registry.npmjs.org/mocha/-/mocha-5.0.1.tgz"; + sha512 = "2975gb84ixyiin9mdahnmpxxqmn9zmc7d07hh6kv0bnl3mqf6slj83r1f44hvk9f5qk247ajfdmynbyinabrbfi0j8za4v776i3572a"; }; dependencies = [ sources."balanced-match-1.0.0" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."browser-stdout-1.3.0" sources."commander-2.11.0" sources."concat-map-0.0.1" @@ -8388,11 +3800,11 @@ in sources."bcrypt-pbkdf-1.0.1" sources."block-stream-0.0.9" sources."boom-4.3.1" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."caseless-0.12.0" sources."co-4.6.0" sources."code-point-at-1.1.0" - sources."combined-stream-1.0.5" + sources."combined-stream-1.0.6" sources."concat-map-0.0.1" sources."console-control-strings-1.1.0" sources."core-util-is-1.0.2" @@ -8407,10 +3819,10 @@ in sources."ecc-jsbn-0.1.1" sources."extend-3.0.1" sources."extsprintf-1.3.0" - sources."fast-deep-equal-1.0.0" + sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."forever-agent-0.6.1" - sources."form-data-2.3.1" + sources."form-data-2.3.2" sources."fs.realpath-1.0.0" sources."fstream-1.0.11" sources."gauge-2.7.4" @@ -8421,7 +3833,7 @@ in sources."har-validator-5.0.3" sources."has-unicode-2.0.1" sources."hawk-6.0.2" - sources."hoek-4.2.0" + sources."hoek-4.2.1" sources."http-signature-1.2.0" sources."inflight-1.0.6" sources."inherits-2.0.3" @@ -8435,8 +3847,8 @@ in sources."json-schema-traverse-0.3.1" sources."json-stringify-safe-5.0.1" sources."jsprim-1.4.1" - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mkdirp-0.5.1" @@ -8448,13 +3860,13 @@ in sources."once-1.4.0" sources."os-homedir-1.0.2" sources."os-tmpdir-1.0.2" - sources."osenv-0.1.4" + sources."osenv-0.1.5" sources."path-is-absolute-1.0.1" sources."performance-now-2.1.0" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."punycode-1.4.1" sources."qs-6.5.1" - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."request-2.83.0" sources."rimraf-2.6.2" sources."safe-buffer-5.1.1" @@ -8468,7 +3880,7 @@ in sources."stringstream-0.0.5" sources."strip-ansi-3.0.1" sources."tar-2.2.1" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" sources."util-deprecate-1.0.2" @@ -8527,11 +3939,11 @@ in sources."bcrypt-pbkdf-1.0.1" sources."block-stream-0.0.9" sources."boom-2.10.1" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."caseless-0.12.0" sources."co-4.6.0" sources."code-point-at-1.1.0" - sources."combined-stream-1.0.5" + sources."combined-stream-1.0.6" sources."concat-map-0.0.1" sources."console-control-strings-1.1.0" sources."core-util-is-1.0.2" @@ -8577,8 +3989,8 @@ in sources."assert-plus-1.0.0" ]; }) - sources."mime-db-1.30.0" - sources."mime-types-2.1.17" + sources."mime-db-1.33.0" + sources."mime-types-2.1.18" sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mkdirp-0.5.1" @@ -8591,18 +4003,18 @@ in sources."once-1.4.0" sources."os-homedir-1.0.2" sources."os-tmpdir-1.0.2" - sources."osenv-0.1.4" + sources."osenv-0.1.5" sources."path-is-absolute-1.0.1" sources."performance-now-0.2.0" - sources."process-nextick-args-1.0.7" + sources."process-nextick-args-2.0.0" sources."punycode-1.4.1" sources."qs-6.4.0" - (sources."rc-1.2.4" // { + (sources."rc-1.2.5" // { dependencies = [ sources."minimist-1.2.0" ]; }) - sources."readable-stream-2.3.3" + sources."readable-stream-2.3.4" sources."request-2.81.0" sources."rimraf-2.6.2" sources."safe-buffer-5.1.1" @@ -8622,7 +4034,7 @@ in sources."strip-json-comments-2.0.1" sources."tar-2.2.1" sources."tar-pack-3.4.1" - sources."tough-cookie-2.3.3" + sources."tough-cookie-2.3.4" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" sources."uid-number-0.0.6" @@ -8644,818 +4056,11 @@ in pnpm = nodeEnv.buildNodePackage { name = "pnpm"; packageName = "pnpm"; - version = "1.31.0"; + version = "1.35.1"; src = fetchurl { - url = "https://registry.npmjs.org/pnpm/-/pnpm-1.31.0.tgz"; - sha1 = "7d971bb0e48c25d4e04db420eee8ee0bcb4c66d4"; + url = "https://registry.npmjs.org/pnpm/-/pnpm-1.35.1.tgz"; + sha1 = "7eb1265daa9da18dab7a7b1645747cd046c42f33"; }; - dependencies = [ - sources."@most/multicast-1.3.0" - sources."@most/prelude-1.7.0" - sources."@pnpm/check-package-1.0.0" - (sources."@pnpm/default-fetcher-0.3.2" // { - dependencies = [ - sources."@types/node-9.3.0" - sources."debug-3.1.0" - sources."ms-2.0.0" - sources."ssri-5.0.0" - ]; - }) - (sources."@pnpm/default-resolver-0.1.2" // { - dependencies = [ - sources."@types/node-9.3.0" - ]; - }) - sources."@pnpm/fs-locker-1.0.1" - sources."@pnpm/git-fetcher-0.2.0" - sources."@pnpm/git-resolver-0.3.0" - sources."@pnpm/local-resolver-0.1.1" - (sources."@pnpm/logger-1.0.0" // { - dependencies = [ - sources."minimist-1.2.0" - ]; - }) - sources."@pnpm/npm-resolver-0.3.11" - (sources."@pnpm/outdated-0.2.5" // { - dependencies = [ - sources."@types/node-9.3.0" - sources."pify-2.3.0" - ]; - }) - sources."@pnpm/package-requester-0.7.1" - sources."@pnpm/pkgid-to-filename-1.0.0" - (sources."@pnpm/server-0.7.1" // { - dependencies = [ - sources."@types/node-9.3.0" - ]; - }) - sources."@pnpm/tarball-fetcher-0.3.4" - (sources."@pnpm/tarball-resolver-0.1.0" // { - dependencies = [ - sources."@types/node-8.5.9" - ]; - }) - sources."@pnpm/types-1.7.0" - sources."@sindresorhus/is-0.7.0" - sources."@types/archy-0.0.31" - sources."@types/byline-4.2.31" - sources."@types/chalk-0.4.31" - sources."@types/common-tags-1.4.0" - sources."@types/get-port-3.2.0" - sources."@types/got-7.1.6" - sources."@types/load-json-file-2.0.7" - sources."@types/mem-1.1.2" - sources."@types/mz-0.0.32" - sources."@types/node-8.5.9" - sources."@types/nopt-3.0.29" - sources."@types/npm-2.0.29" - sources."@types/p-limit-1.1.2" - sources."@types/p-queue-1.1.0" - sources."@types/p-series-1.0.1" - sources."@types/ramda-0.25.16" - sources."@types/rc-0.0.1" - sources."@types/retry-0.10.2" - sources."@types/semver-5.4.0" - sources."@types/update-notifier-1.0.3" - sources."@types/uuid-3.4.3" - sources."@types/write-json-file-2.2.1" - sources."@zkochan/cmd-shim-2.2.4" - (sources."@zkochan/libnpx-9.6.1" // { - dependencies = [ - sources."ansi-regex-3.0.0" - sources."execa-0.7.0" - sources."is-fullwidth-code-point-2.0.0" - sources."load-json-file-2.0.0" - sources."mem-1.1.0" - sources."pify-2.3.0" - sources."strip-ansi-4.0.0" - ]; - }) - sources."@zkochan/npm-package-arg-1.0.0" - sources."JSONStream-1.3.2" - sources."abbrev-1.1.1" - sources."add-subtract-date-1.0.13" - sources."agent-base-4.2.0" - sources."agentkeepalive-3.3.0" - sources."ajv-5.5.2" - sources."ansi-align-2.0.0" - sources."ansi-escapes-3.0.0" - sources."ansi-parser-3.2.8" - sources."ansi-regex-2.1.1" - sources."ansi-styles-3.2.0" - sources."ansicolors-0.3.2" - sources."ansistyles-0.1.3" - sources."ansy-1.0.13" - sources."any-promise-1.3.0" - sources."aproba-1.2.0" - sources."archy-1.0.0" - sources."are-we-there-yet-1.1.4" - sources."argparse-1.0.9" - sources."arr-flatten-1.1.0" - sources."array-find-index-1.0.2" - sources."array-flatten-2.1.1" - sources."array-includes-3.0.3" - sources."array-union-1.0.2" - sources."array-uniq-1.0.3" - sources."arrify-1.0.1" - sources."as-table-1.0.31" - sources."asap-2.0.6" - sources."asn1-0.2.3" - sources."assert-plus-1.0.0" - sources."asynckit-0.4.0" - sources."aws-sign2-0.7.0" - sources."aws4-1.6.0" - sources."babel-runtime-6.26.0" - sources."balanced-match-1.0.0" - sources."base64-js-0.0.8" - sources."bcrypt-pbkdf-1.0.1" - sources."bindings-1.3.0" - sources."bl-1.2.1" - sources."block-stream-0.0.9" - sources."bluebird-3.5.1" - sources."bole-3.0.2" - sources."boom-4.3.1" - (sources."boxen-1.3.0" // { - dependencies = [ - sources."chalk-2.3.0" - ]; - }) - sources."brace-expansion-1.1.8" - sources."browserify-zlib-0.1.4" - sources."buffer-3.6.0" - sources."bug-killer-4.4.4" - sources."builtin-modules-1.1.1" - sources."builtins-1.0.3" - sources."byline-5.0.0" - sources."bzip2-maybe-1.0.0" - sources."cacache-10.0.2" - sources."cacheable-request-2.1.4" - sources."call-limit-1.1.0" - sources."camelcase-4.1.0" - sources."capture-stack-trace-1.0.0" - sources."caseless-0.12.0" - sources."chalk-2.3.0" - sources."chownr-1.0.1" - sources."ci-info-1.1.2" - sources."cidr-regex-1.0.6" - sources."class-methods-1.0.10" - sources."cli-box-5.0.0" - sources."cli-boxes-1.0.0" - sources."cli-cursor-2.1.0" - (sources."cli-table2-0.2.0" // { - dependencies = [ - sources."ansi-regex-2.1.1" - sources."strip-ansi-3.0.1" - ]; - }) - (sources."cliui-3.2.0" // { - dependencies = [ - sources."string-width-1.0.2" - ]; - }) - sources."clone-1.0.3" - sources."clone-response-1.0.2" - (sources."clp-3.2.1" // { - dependencies = [ - sources."typpy-2.0.0" - sources."ul-5.0.0" - ]; - }) - sources."cmd-shim-2.0.2" - sources."co-4.6.0" - sources."code-point-at-1.1.0" - sources."color-convert-1.9.1" - sources."color-name-1.1.3" - sources."colors-1.1.2" - (sources."columnify-1.5.4" // { - dependencies = [ - sources."ansi-regex-2.1.1" - sources."strip-ansi-3.0.1" - ]; - }) - sources."combined-stream-1.0.5" - sources."common-tags-1.7.2" - sources."concat-map-0.0.1" - sources."concat-stream-1.6.0" - sources."config-chain-1.1.11" - sources."configstore-3.1.1" - sources."console-control-strings-1.1.0" - sources."copy-concurrently-1.0.5" - sources."core-js-2.5.3" - sources."core-util-is-1.0.2" - sources."couleurs-6.0.9" - sources."create-error-class-3.0.2" - sources."credentials-by-uri-1.0.0" - sources."cross-spawn-5.1.0" - (sources."cryptiles-3.1.2" // { - dependencies = [ - sources."boom-5.2.0" - ]; - }) - sources."crypto-random-string-1.0.0" - sources."csv-parser-1.12.0" - sources."currently-unhandled-0.4.1" - sources."custom-return-1.0.10" - sources."cyclist-0.2.2" - sources."dashdash-1.14.1" - sources."data-uri-to-buffer-2.0.0" - sources."date-unit-ms-1.1.12" - sources."daty-1.1.4" - sources."days-1.1.1" - sources."debug-2.6.9" - sources."debuglog-1.0.1" - sources."decamelize-1.2.0" - sources."decode-uri-component-0.2.0" - sources."decompress-maybe-1.0.0" - sources."decompress-response-3.3.0" - sources."deep-extend-0.4.2" - sources."defaults-1.0.3" - sources."deffy-2.2.2" - sources."define-properties-1.1.2" - sources."delay-2.0.0" - sources."delayed-stream-1.0.0" - sources."delegates-1.0.0" - sources."dependencies-hierarchy-2.0.1" - sources."dependency-path-1.2.0" - sources."detect-indent-5.0.0" - sources."detect-libc-1.0.3" - sources."dezalgo-1.0.3" - (sources."diable-4.0.1" // { - dependencies = [ - sources."ansi-parser-2.0.0" - sources."couleurs-5.0.0" - sources."deffy-2.0.0" - sources."has-flag-1.0.0" - sources."supports-color-3.2.3" - ]; - }) - sources."diff-dates-1.0.11" - sources."dint-2.0.2" - sources."dir-glob-2.0.0" - sources."dot-prop-4.2.0" - sources."dotenv-4.0.0" - (sources."drive-by-path-1.0.0" // { - dependencies = [ - sources."ramda-0.24.1" - ]; - }) - sources."drivelist-5.2.12" - sources."duplexer3-0.1.4" - sources."duplexify-3.5.3" - sources."ecc-jsbn-0.1.1" - sources."editor-1.0.0" - sources."encode-registry-1.1.0" - sources."encoding-0.1.12" - sources."end-of-stream-1.4.1" - sources."err-code-1.1.2" - sources."errno-0.1.6" - sources."error-ex-1.3.1" - sources."es-abstract-1.10.0" - sources."es-to-primitive-1.1.1" - sources."es6-promise-4.2.4" - sources."es6-promisify-5.0.0" - sources."escape-string-regexp-1.0.5" - sources."esprima-4.0.0" - sources."exclude-arr-1.0.9" - sources."execa-0.8.0" - sources."expand-template-1.1.0" - sources."extend-3.0.1" - sources."extsprintf-1.3.0" - sources."fast-deep-equal-1.0.0" - sources."fast-json-stable-stringify-2.0.0" - sources."fast-safe-stringify-1.1.13" - (sources."fetch-from-npm-registry-0.1.0" // { - dependencies = [ - sources."@types/node-8.5.9" - ]; - }) - sources."fillo-1.0.11" - (sources."find-packages-2.1.2" // { - dependencies = [ - sources."path-type-3.0.0" - sources."read-pkg-3.0.0" - ]; - }) - sources."find-up-2.1.0" - sources."flat-colors-3.0.0" - sources."flush-write-stream-1.0.2" - sources."foreach-2.0.5" - sources."forever-agent-0.6.1" - sources."form-data-2.3.1" - sources."formatoid-1.2.2" - sources."from2-2.3.0" - sources."fs-vacuum-1.2.10" - sources."fs-write-stream-atomic-1.0.10" - sources."fs.realpath-1.0.0" - sources."fstream-1.0.11" - sources."function-bind-1.1.1" - sources."function.name-1.0.10" - sources."gauge-2.7.4" - sources."generate-function-1.1.0" - sources."generate-object-property-1.2.0" - sources."genfun-4.0.1" - sources."get-caller-file-1.0.2" - sources."get-npm-tarball-url-2.0.1" - sources."get-port-3.2.0" - sources."get-source-1.0.24" - sources."get-stream-3.0.0" - sources."getpass-0.1.7" - sources."github-from-package-0.0.0" - sources."glob-7.1.2" - sources."global-dirs-0.1.1" - sources."globby-7.1.1" - sources."got-8.0.3" - sources."graceful-fs-4.1.11" - sources."graceful-git-1.0.1" - sources."graph-sequencer-2.0.0" - sources."gunzip-maybe-1.4.1" - sources."har-schema-2.0.0" - sources."har-validator-5.0.3" - sources."has-1.0.1" - sources."has-ansi-2.0.0" - sources."has-flag-2.0.0" - sources."has-symbol-support-x-1.4.1" - sources."has-to-string-tag-x-1.4.1" - sources."has-unicode-2.0.1" - sources."hawk-6.0.2" - sources."hoek-4.2.0" - sources."hosted-git-info-2.5.0" - sources."http-cache-semantics-3.8.1" - sources."http-proxy-agent-2.0.0" - sources."http-signature-1.2.0" - sources."https-proxy-agent-2.1.1" - sources."humanize-ms-1.2.1" - sources."iconv-lite-0.4.19" - sources."ieee754-1.1.8" - sources."iferr-0.1.5" - sources."ignore-3.3.7" - sources."ignore-walk-3.0.1" - sources."import-lazy-2.1.0" - sources."imurmurhash-0.1.4" - sources."individual-3.0.0" - sources."inflight-1.0.6" - sources."inherits-2.0.3" - sources."ini-1.3.5" - sources."init-package-json-1.10.1" - sources."into-stream-3.1.0" - sources."invert-kv-1.0.0" - sources."ip-1.1.5" - sources."is-arrayish-0.2.1" - sources."is-builtin-module-1.0.0" - sources."is-bzip2-1.0.0" - sources."is-callable-1.1.3" - sources."is-ci-1.1.0" - sources."is-cidr-1.0.0" - sources."is-date-object-1.0.1" - sources."is-deflate-1.0.0" - sources."is-fullwidth-code-point-1.0.0" - sources."is-gzip-1.0.0" - sources."is-inner-link-2.0.2" - sources."is-installed-globally-0.1.0" - sources."is-npm-1.0.0" - sources."is-obj-1.0.1" - sources."is-object-1.0.1" - sources."is-path-inside-1.0.1" - sources."is-plain-obj-1.1.0" - sources."is-property-1.0.2" - sources."is-redirect-1.0.0" - sources."is-regex-1.0.4" - sources."is-retry-allowed-1.1.0" - sources."is-ssh-1.3.0" - sources."is-stream-1.1.0" - sources."is-subdir-1.0.2" - sources."is-symbol-1.0.1" - sources."is-typedarray-1.0.0" - sources."is-windows-1.0.1" - sources."isarray-1.0.0" - sources."isexe-2.0.0" - sources."isstream-0.1.2" - sources."isurl-1.0.0" - sources."iterate-object-1.3.2" - sources."js-yaml-3.10.0" - sources."jsbn-0.1.1" - sources."json-buffer-3.0.0" - sources."json-parse-better-errors-1.0.1" - sources."json-schema-0.2.3" - sources."json-schema-traverse-0.3.1" - sources."json-stringify-safe-5.0.1" - sources."json2yaml-1.1.0" - sources."jsonparse-1.3.1" - sources."jsprim-1.4.1" - sources."keyv-3.0.0" - sources."latest-version-3.1.0" - sources."lazy-property-1.0.0" - sources."lcid-1.0.0" - (sources."le-table-4.0.0" // { - dependencies = [ - sources."ansi-parser-3.0.0" - ]; 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- }) - sources."npm-bundled-1.0.3" - sources."npm-cache-filename-1.0.2" - sources."npm-install-checks-3.0.0" - sources."npm-lifecycle-1.0.3" - sources."npm-package-arg-5.1.2" - sources."npm-packlist-1.1.10" - sources."npm-pick-manifest-1.0.4" - sources."npm-profile-2.0.5" - sources."npm-registry-client-8.5.0" - sources."npm-run-path-2.0.2" - sources."npm-user-validate-1.0.0" - (sources."npmlog-4.1.2" // { - dependencies = [ - sources."ansi-regex-2.1.1" - sources."strip-ansi-3.0.1" - ]; - }) - sources."number-is-nan-1.0.1" - sources."oauth-sign-0.8.2" - sources."object-assign-4.1.1" - sources."object-keys-1.0.11" - sources."object.getownpropertydescriptors-2.0.3" - sources."observatory-1.0.0" - sources."once-1.4.0" - sources."onetime-2.0.1" - sources."opener-1.4.3" - sources."os-homedir-1.0.2" - sources."os-locale-2.1.0" - sources."os-tmpdir-1.0.2" - sources."osenv-0.1.4" - sources."overlap-2.0.0" - sources."p-cancelable-0.3.0" - sources."p-defer-1.0.0" - sources."p-every-1.0.2" - sources."p-filter-1.0.0" - sources."p-finally-1.0.0" - sources."p-is-promise-1.1.0" - sources."p-limit-1.2.0" - sources."p-locate-2.0.0" - sources."p-map-1.2.0" - sources."p-queue-2.3.0" - sources."p-reduce-1.0.0" - sources."p-series-1.0.0" - sources."p-timeout-2.0.1" - sources."p-try-1.0.0" - sources."package-json-4.0.1" - (sources."package-store-0.15.2" // { - dependencies = [ - sources."@types/node-9.3.0" - sources."debug-3.1.0" - sources."minimist-1.2.0" - sources."ms-2.0.0" - sources."unzip-response-1.0.2" - ]; - }) - sources."pacote-6.0.4" - sources."pako-0.2.9" - sources."parallel-transform-1.1.0" - sources."parse-it-1.0.8" - sources."parse-json-2.2.0" - sources."parse-npm-tarball-url-1.0.2" - sources."parse-url-1.3.11" - sources."path-absolute-1.0.0" - sources."path-exists-3.0.0" - sources."path-is-absolute-1.0.1" - sources."path-is-inside-1.0.2" - sources."path-key-2.0.1" - sources."path-name-1.0.0" - sources."path-type-2.0.0" - sources."peek-stream-1.1.2" - sources."performance-now-2.1.0" - sources."pify-3.0.0" - sources."pinkie-2.0.4" - sources."pinkie-promise-2.0.1" - (sources."pkgs-graph-2.0.0-0" // { - dependencies = [ - sources."npm-package-arg-6.0.0" - ]; - }) - (sources."pnpm-default-reporter-0.11.8" // { - dependencies = [ - sources."@types/node-9.3.0" - sources."ansi-regex-3.0.0" - sources."strip-ansi-4.0.0" - sources."wrap-ansi-3.0.1" - ]; - }) - (sources."pnpm-file-reporter-0.0.1" // { - dependencies = [ - sources."@types/node-7.0.52" - sources."ansi-escapes-1.4.0" - sources."ansi-styles-2.2.1" - sources."chalk-1.1.3" - sources."supports-color-2.0.0" - ]; - }) - sources."pnpm-install-checks-1.1.0" - (sources."pnpm-list-2.0.1" // { - dependencies = [ - sources."@types/node-9.3.0" - sources."npm-package-arg-6.0.0" - ]; - }) - sources."pnpm-logger-0.0.0" - sources."pnpm-shrinkwrap-5.1.1" - sources."prebuild-install-2.5.0" - sources."prepend-http-2.0.0" - sources."pretty-bytes-4.0.2" - sources."printable-characters-1.0.38" - sources."proc-output-1.0.6" - (sources."process-exists-3.0.0" // { - dependencies = [ - sources."get-stream-2.3.1" - sources."into-stream-2.0.1" - sources."minimist-1.2.0" - ]; - }) - sources."process-nextick-args-1.0.7" - sources."promise-inflight-1.0.1" - sources."promise-retry-1.1.1" - sources."promzard-0.3.0" - sources."proper-lockfile-2.0.1" - sources."proto-list-1.2.4" - sources."protocols-1.4.6" - sources."protoduck-4.0.0" - sources."prr-1.0.1" - sources."ps-list-4.0.0" - sources."pseudomap-1.0.2" - sources."pump-1.0.3" - (sources."pumpify-1.4.0" // { - dependencies = [ - sources."pump-2.0.1" - ]; - }) - sources."punycode-1.4.1" - sources."qrcode-terminal-0.11.0" - sources."qs-6.5.1" - sources."query-string-5.0.1" - sources."qw-1.0.1" - sources."ramda-0.25.0" - sources."rc-1.2.4" - sources."read-1.0.7" - sources."read-cmd-shim-1.0.1" - sources."read-installed-4.0.3" - sources."read-package-json-2.0.12" - sources."read-package-tree-5.1.6" - sources."read-pkg-2.0.0" - sources."read-pkg-up-2.0.0" - sources."readable-stream-2.3.3" - sources."readdir-scoped-modules-1.0.2" - sources."regenerator-runtime-0.11.1" - sources."regex-escape-3.4.8" - sources."registry-auth-token-3.3.1" - sources."registry-url-3.1.0" - sources."remedial-1.0.7" - sources."remove-all-except-outer-links-1.0.3" - sources."remove-trailing-separator-1.1.0" - sources."rename-overwrite-1.0.0" - sources."replace-string-1.1.0" - sources."request-2.83.0" - sources."require-directory-2.1.1" - sources."require-main-filename-1.0.1" - sources."resolve-from-4.0.0" - sources."resolve-link-target-1.0.1" - sources."responselike-1.0.2" - sources."restore-cursor-2.0.0" - sources."retry-0.10.1" - sources."rimraf-2.6.2" - sources."rimraf-then-1.0.1" - sources."run-queue-1.0.3" - sources."safe-buffer-5.1.1" - sources."sec-1.0.0" - sources."semver-5.5.0" - sources."semver-diff-2.1.0" - sources."semver-regex-1.0.0" - sources."set-blocking-2.0.0" - sources."sha-2.0.1" - sources."shebang-command-1.2.0" - sources."shebang-regex-1.0.0" - sources."signal-exit-3.0.2" - sources."simple-get-1.4.3" - sources."slash-1.0.0" - sources."slide-1.1.6" - sources."smart-buffer-1.1.15" - sources."sntp-2.1.0" - sources."socks-1.1.10" - sources."socks-proxy-agent-3.0.1" - sources."sort-keys-2.0.0" - sources."sorted-object-2.0.1" - (sources."sorted-union-stream-2.1.3" // { - dependencies = [ - sources."isarray-1.0.0" - sources."readable-stream-1.1.14" - sources."string_decoder-1.0.3" - ]; - }) - sources."source-map-0.6.1" - sources."spawno-2.0.7" - sources."spdx-correct-1.0.2" - sources."spdx-expression-parse-1.0.4" - sources."spdx-license-ids-1.2.2" - sources."split2-2.2.0" - sources."sprintf-js-1.0.3" - sources."sshpk-1.13.1" - sources."ssri-5.1.0" - (sources."stacktracey-1.2.100" // { - dependencies = [ - sources."@types/node-8.5.9" - ]; - }) - sources."static-methods-1.0.10" - sources."stream-each-1.2.2" - (sources."stream-iterate-1.2.0" // { - dependencies = [ - sources."readable-stream-2.3.3" - ]; - }) - sources."stream-shift-1.0.0" - sources."strict-uri-encode-1.1.0" - sources."string-width-2.1.1" - sources."string_decoder-1.0.3" - sources."stringstream-0.0.5" - sources."strip-ansi-3.0.1" - sources."strip-bom-3.0.0" - sources."strip-color-0.1.0" - sources."strip-eof-1.0.0" - sources."strip-json-comments-2.0.1" - (sources."supi-0.12.1" // { - dependencies = [ - sources."@types/node-9.3.0" - sources."execa-0.9.0" - sources."npm-lifecycle-2.0.0" - sources."pify-2.3.0" - sources."write-file-atomic-1.3.4" - ]; - }) - sources."supports-color-4.5.0" - sources."symbol-observable-1.1.0" - sources."symlink-dir-1.1.2" - sources."tar-4.0.2" - sources."tar-fs-1.16.0" - sources."tar-stream-1.5.5" - (sources."tasklist-3.1.0" // { - dependencies = [ - sources."pify-2.3.0" - ]; - }) - sources."term-size-1.2.0" - sources."text-table-0.2.0" - sources."thenify-3.3.0" - sources."thenify-all-1.6.0" - sources."through-2.3.8" - sources."through2-2.0.3" - sources."timed-out-4.0.1" - sources."timeout-then-1.1.0" - sources."tough-cookie-2.3.3" - sources."tree-kill-1.2.0" - sources."tunnel-agent-0.6.0" - sources."tweetnacl-0.14.5" - sources."typedarray-0.0.6" - sources."typpy-2.3.10" - sources."uid-number-0.0.6" - (sources."ul-5.2.13" // { - dependencies = [ - sources."deffy-2.2.2" - ]; - }) - sources."umask-1.1.0" - sources."unbzip2-stream-1.2.5" - sources."unique-filename-1.1.0" - sources."unique-slug-2.0.0" - sources."unique-string-1.0.0" - sources."unpack-stream-3.0.1" - sources."unpipe-1.0.0" - sources."unzip-response-2.0.1" - sources."update-notifier-2.3.0" - sources."url-parse-lax-3.0.0" - sources."url-to-options-1.0.1" - sources."util-deprecate-1.0.2" - sources."util-extend-1.0.3" - sources."util.promisify-1.0.0" - sources."uuid-3.2.1" - sources."validate-npm-package-license-3.0.1" - sources."validate-npm-package-name-3.0.0" - sources."verror-1.10.0" - sources."version-selector-type-2.0.0" - sources."wcwidth-1.0.1" - sources."which-1.3.0" - sources."which-module-2.0.0" - sources."wide-align-1.1.2" - sources."widest-line-2.0.0" - sources."worker-farm-1.5.2" - sources."wrap-ansi-2.1.0" - sources."wrappy-1.0.2" - sources."write-file-atomic-2.3.0" - sources."write-json-file-2.3.0" - sources."write-pkg-3.1.0" - sources."write-yaml-file-1.0.0" - sources."x256-0.0.2" - sources."xdg-basedir-3.0.0" - sources."xtend-4.0.1" - sources."y18n-3.2.1" - sources."yallist-2.1.2" - sources."yargs-8.0.2" - sources."yargs-parser-7.0.0" - sources."zen-observable-0.7.1" - sources."zen-push-0.2.1" - ]; buildInputs = globalBuildInputs; meta = { description = "Fast, disk space efficient package manager"; @@ -9493,7 +4098,7 @@ in dependencies = [ sources."async-2.1.5" sources."balanced-match-1.0.0" - sources."brace-expansion-1.1.8" + sources."brace-expansion-1.1.11" sources."cli-table-0.3.1" sources."colors-1.0.3" sources."commander-2.9.0" @@ -9503,10 +4108,10 @@ in sources."graceful-readlink-1.0.1" sources."inherits-2.0.3" sources."isarray-1.0.0" - sources."lodash-4.17.4" + sources."lodash-4.17.5" sources."minimatch-3.0.4" - sources."process-nextick-args-1.0.7" - sources."readable-stream-2.3.3" + sources."process-nextick-args-2.0.0" + sources."readable-stream-2.3.4" sources."readdirp-2.1.0" sources."safe-buffer-5.1.1" sources."set-immediate-shim-1.0.1" diff --git a/pkgs/development/ocaml-modules/angstrom/default.nix b/pkgs/development/ocaml-modules/angstrom/default.nix index c4ed5acbe1b6..154b4890e4fc 100644 --- a/pkgs/development/ocaml-modules/angstrom/default.nix +++ b/pkgs/development/ocaml-modules/angstrom/default.nix @@ -1,31 +1,29 @@ -{ stdenv, fetchFromGitHub, ocaml, ocamlbuild, cstruct, result, findlib }: +{ stdenv, fetchFromGitHub, ocaml, findlib, jbuilder, alcotest, result }: -let param = - if stdenv.lib.versionAtLeast ocaml.version "4.03" - then { - version = "0.5.1"; - sha256 = "0rm79xyszy9aqvflcc13y9xiya82z31fzmr3b3hx91pmqviymhgc"; - } else { - version = "0.4.0"; - sha256 = "019s3jwhnswa914bgj1fa6q67k0bl2ahqdaqfnavcbyii8763kh2"; - }; -in +if !stdenv.lib.versionAtLeast ocaml.version "4.03" +then throw "angstrom is not available for OCaml ${ocaml.version}" +else stdenv.mkDerivation rec { - inherit (param) version; - name = "ocaml-angstrom-${version}"; + version = "0.8.1"; + name = "ocaml${ocaml.version}-angstrom-${version}"; src = fetchFromGitHub { owner = "inhabitedtype"; repo = "angstrom"; rev = "${version}"; - inherit (param) sha256; + sha256 = "067r3vy5lac1bfx947gy722amna3dbcak54nlh24vx87pmcq31qc"; }; - createFindlibDestdir = true; + buildInputs = [ ocaml findlib jbuilder alcotest ]; + propagatedBuildInputs = [ result ]; - buildInputs = [ ocaml findlib ocamlbuild ]; - propagatedBuildInputs = [ result cstruct ]; + buildPhase = "jbuilder build -p angstrom"; + + doCheck = true; + checkPhase = "jbuilder runtest -p angstrom"; + + inherit (jbuilder) installPhase; meta = { homepage = https://github.com/inhabitedtype/angstrom; diff --git a/pkgs/development/ocaml-modules/cil/default.nix b/pkgs/development/ocaml-modules/cil/default.nix index 99b5f92b3405..0394266353ce 100644 --- a/pkgs/development/ocaml-modules/cil/default.nix +++ b/pkgs/development/ocaml-modules/cil/default.nix @@ -11,6 +11,7 @@ stdenv.mkDerivation { createFindlibDestdir = true; preConfigure = '' + substituteInPlace Makefile.in --replace 'MACHDEPCC=gcc' 'MACHDEPCC=$(CC)' export FORCE_PERL_PREFIX=1 ''; prefixKey = "-prefix="; diff --git a/pkgs/development/ocaml-modules/cohttp/default.nix b/pkgs/development/ocaml-modules/cohttp/default.nix index ef92a005c773..24f0e9bfd7a5 100644 --- a/pkgs/development/ocaml-modules/cohttp/default.nix +++ b/pkgs/development/ocaml-modules/cohttp/default.nix @@ -4,14 +4,14 @@ }: stdenv.mkDerivation rec { - version = "1.0.0"; + version = "1.0.2"; name = "ocaml${ocaml.version}-cohttp-${version}"; src = fetchFromGitHub { owner = "mirage"; repo = "ocaml-cohttp"; rev = "v${version}"; - sha256 = "0h9ak2bvhmcdxickvybpg45il33xszh2ksacpjgqrnnslxnh81ig"; + sha256 = "0zgn32axmjvkmbvyfkbjcqximzc4zcfxs118b98xyrqnvwb0k7ka"; }; buildInputs = [ ocaml findlib jbuilder jsonm ppx_fields_conv ppx_sexp_conv ]; diff --git a/pkgs/development/ocaml-modules/ctypes/default.nix b/pkgs/development/ocaml-modules/ctypes/default.nix index b419971921ba..0ddf3cb5995c 100644 --- a/pkgs/development/ocaml-modules/ctypes/default.nix +++ b/pkgs/development/ocaml-modules/ctypes/default.nix @@ -1,19 +1,19 @@ -{stdenv, buildOcaml, fetchurl, libffi, pkgconfig, ncurses}: +{ stdenv, buildOcaml, fetchzip, libffi, pkgconfig, ncurses, integers }: buildOcaml rec { name = "ctypes"; - version = "0.11.5"; + version = "0.13.1"; minimumSupportedOcamlVersion = "4"; - src = fetchurl { - url = "https://github.com/ocamllabs/ocaml-ctypes/archive/${version}.tar.gz"; - sha256 = "164gyrs6zxr5pyljwpjgd4knwlrkcmamsq3gvkkkvgf9rmhrl3zf"; + src = fetchzip { + url = "https://github.com/ocamllabs/ocaml-ctypes/archive/67e711ec891e087fbe1e0b4665aa525af4eaa409.tar.gz"; + sha256 = "1z84s5znr3lj84rzv6m37xxj9h7fwx4qiiykx3djf52qgk1rb2xb"; }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ ncurses ]; - propagatedBuildInputs = [ libffi ]; + propagatedBuildInputs = [ integers libffi ]; hasSharedObjects = true; diff --git a/pkgs/development/ocaml-modules/curses/default.nix b/pkgs/development/ocaml-modules/curses/default.nix index 4fd75e7aac53..eebb2f68f3dd 100644 --- a/pkgs/development/ocaml-modules/curses/default.nix +++ b/pkgs/development/ocaml-modules/curses/default.nix @@ -13,6 +13,9 @@ stdenv.mkDerivation rec { buildInputs = [ ocaml findlib ]; + # Fix build for recent ncurses versions + NIX_CFLAGS_COMPILE = [ "-DNCURSES_INTERNALS=1" ]; + createFindlibDestdir = true; postPatch = '' diff --git a/pkgs/development/ocaml-modules/janestreet/async_ssl.nix b/pkgs/development/ocaml-modules/janestreet/async_ssl.nix index 5cd4c6064e08..fdfd0338bb23 100644 --- a/pkgs/development/ocaml-modules/janestreet/async_ssl.nix +++ b/pkgs/development/ocaml-modules/janestreet/async_ssl.nix @@ -1,10 +1,12 @@ -{stdenv, buildOcamlJane, fetchurl, async, comparelib, core, ctypes, openssl, - fieldslib, herelib, pipebang, sexplib, ocaml_oasis}: +{ stdenv, ocaml, buildOcamlJane, fetchurl, async, comparelib, core, ctypes +, openssl, fieldslib, herelib, pipebang, sexplib, ocaml_oasis, integers +}: buildOcamlJane rec { name = "async_ssl"; version = "113.33.07"; hash = "0bhzpnmlx6dy4fli3i7ipjwqbsdi7fq171jrila5dr3ciy3841xs"; + postPatch = "export CAML_LD_LIBRARY_PATH=${integers}/lib/ocaml/${ocaml.version}/site-lib/stubslibs:$CAML_LD_LIBRARY_PATH"; propagatedBuildInputs = [ ctypes async comparelib core fieldslib herelib pipebang sexplib openssl ocaml_oasis ]; meta = with stdenv.lib; { diff --git a/pkgs/development/python-modules/aenum/default.nix b/pkgs/development/python-modules/aenum/default.nix index 466c20e19ca5..facf86c58988 100644 --- a/pkgs/development/python-modules/aenum/default.nix +++ b/pkgs/development/python-modules/aenum/default.nix @@ -2,12 +2,12 @@ buildPythonPackage rec { pname = "aenum"; - version = "2.0.9"; + version = "2.1.0"; name = "${pname}-${version}"; src = fetchPypi { inherit pname version; - sha256 = "d98bc55136d696fcf323760c3db0de489da9e41fd51283fa6f90205deb85bf6a"; + sha256 = "9eb1c8f48ae13c56d22a7227db0e4b1717131b284c6c0db6e4ccca6f5894df95"; }; # For Python 3, locale has to be set to en_US.UTF-8 for diff --git a/pkgs/development/python-modules/alembic/default.nix b/pkgs/development/python-modules/alembic/default.nix index 54e1a753597c..176805e57e5c 100644 --- a/pkgs/development/python-modules/alembic/default.nix +++ b/pkgs/development/python-modules/alembic/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { name = "${pname}-${version}"; pname = "alembic"; - version = "0.9.7"; + version = "0.9.8"; src = fetchPypi { inherit pname version; - sha256 = "46f4849c6dce69f54dd5001b3215b6a983dee6b17512efee10e237fa11f20cfa"; + sha256 = "13b8611788acf0d7b617775db5c2ae26554a6d4263c590ef628d448fd05aef56"; }; buildInputs = [ pytest pytestcov mock coverage ]; diff --git a/pkgs/development/python-modules/argcomplete/default.nix b/pkgs/development/python-modules/argcomplete/default.nix index 37164cb42760..b13470b4c45b 100644 --- a/pkgs/development/python-modules/argcomplete/default.nix +++ b/pkgs/development/python-modules/argcomplete/default.nix @@ -4,11 +4,11 @@ buildPythonPackage rec { name = "${pname}-${version}"; pname = "argcomplete"; - version = "1.9.3"; + version = "1.9.4"; src = fetchPypi { inherit pname version; - sha256 = "d97b7f3cfaa4e494ad59ed6d04c938fc5ed69b590bd8f53274e258fb1119bd1b"; + sha256 = "06c8a54ffaa6bfc9006314498742ec8843601206a3b94212f82657673662ecf1"; }; doCheck = false; # bash-completion test fails with "compgen: command not found". diff --git a/pkgs/development/python-modules/asana/default.nix b/pkgs/development/python-modules/asana/default.nix index 7990ece749b5..91664f76ad10 100644 --- a/pkgs/development/python-modules/asana/default.nix +++ b/pkgs/development/python-modules/asana/default.nix @@ -4,7 +4,7 @@ buildPythonPackage rec { pname = "asana"; - version = "0.6.7"; + version = "0.7.0"; name = "${pname}-${version}"; meta = { @@ -15,7 +15,7 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "d576601116764050c4cf63b417f1c24700b76cf6686f0e51e6b0b77d450e7973"; + sha256 = "a7ff4a78529257a5412e78cafd6b3025523364c0ab628d579f2771dd66b254bc"; }; checkInputs = [ pytest ]; diff --git a/pkgs/development/python-modules/asgiref/default.nix b/pkgs/development/python-modules/asgiref/default.nix index a2815fc0c86f..223f53698e95 100644 --- a/pkgs/development/python-modules/asgiref/default.nix +++ b/pkgs/development/python-modules/asgiref/default.nix @@ -1,12 +1,12 @@ { stdenv, buildPythonPackage, fetchurl, six }: buildPythonPackage rec { - version = "2.1.1"; + version = "2.1.5"; pname = "asgiref"; name = "${pname}-${version}"; src = fetchurl { url = "mirror://pypi/a/asgiref/${name}.tar.gz"; - sha256 = "112828022d772925b47b22caf8108dadd3b26bb0af719eb01b2c3a807795429d"; + sha256 = "1a46196df28c67e046a54cc537ce5a8f6a59eb68649f54680d7e4fc3b113ab1b"; }; propagatedBuildInputs = [ six ]; diff --git a/pkgs/development/python-modules/astropy/default.nix b/pkgs/development/python-modules/astropy/default.nix index 514762b7a37d..ccf988fc56db 100644 --- a/pkgs/development/python-modules/astropy/default.nix +++ b/pkgs/development/python-modules/astropy/default.nix @@ -7,13 +7,13 @@ buildPythonPackage rec { pname = "astropy"; - version = "2.0.3"; + version = "3.0"; name = "${pname}-${version}"; doCheck = false; #Some tests are failing. More importantly setup.py hangs on completion. Needs fixing with a proper shellhook. src = fetchPypi { inherit pname version; - sha256 = "fdfc0248f6250798ed6d1327be609cb901db89ae01fc768cfbc9e263bdf56f4f"; + sha256 = "9e0ad19b9d6d227bdf0932bbe64a8c5dd4a47d4ec078586cf24bf9f0c61d9ecf"; }; propagatedBuildInputs = [ pytest numpy ]; # yes it really has pytest in install_requires diff --git a/pkgs/development/python-modules/backports_functools_lru_cache/default.nix b/pkgs/development/python-modules/backports_functools_lru_cache/default.nix index 0def8a2de2a0..bcaa844720bd 100644 --- a/pkgs/development/python-modules/backports_functools_lru_cache/default.nix +++ b/pkgs/development/python-modules/backports_functools_lru_cache/default.nix @@ -7,11 +7,11 @@ if !(pythonOlder "3.3") then null else buildPythonPackage rec { pname = "backports.functools_lru_cache"; - version = "1.4"; + version = "1.5"; src = fetchPypi { inherit pname version; - sha256 = "31f235852f88edc1558d428d890663c49eb4514ffec9f3650e7f3c9e4a12e36f"; + sha256 = "9d98697f088eb1b0fa451391f91afb5e3ebde16bbdb272819fd091151fda4f1a"; }; buildInputs = [ setuptools_scm ]; diff --git a/pkgs/development/python-modules/bibtexparser/default.nix b/pkgs/development/python-modules/bibtexparser/default.nix index 74b1062cea44..50e389a9e14b 100644 --- a/pkgs/development/python-modules/bibtexparser/default.nix +++ b/pkgs/development/python-modules/bibtexparser/default.nix @@ -5,12 +5,12 @@ buildPythonPackage rec { pname = "bibtexparser"; - version = "0.6.2"; + version = "1.0.1"; name = "${pname}-${version}"; src = fetchPypi { inherit pname version; - sha256 = "5888219ac5db1c63ae0ad4db52ec7ad87fe7a32bd60e62ee87bceedb8ebf73b8"; + sha256 = "cc41cdd8332c2bf44b97daf1f135f4f267c3b744c33976655cd270b66f964c0a"; }; # No tests in archive diff --git a/pkgs/development/python-modules/bokeh/default.nix b/pkgs/development/python-modules/bokeh/default.nix index e3c77fa65cf4..66a5a542bf1e 100644 --- a/pkgs/development/python-modules/bokeh/default.nix +++ b/pkgs/development/python-modules/bokeh/default.nix @@ -34,11 +34,11 @@ buildPythonPackage rec { pname = "bokeh"; name = "${pname}${version}"; - version = "0.12.13"; + version = "0.12.14"; src = fetchPypi { inherit pname version; - sha256 = "6e28cbfd88de0c459435278b75f9982591ec0aaa3d37a195052645e1c62e89e3"; + sha256 = "42abada2e484d2d5b290d14a943e1c3cd7adabd39933b5f074f57b6cf7920a87"; }; disabled = isPyPy; diff --git a/pkgs/development/python-modules/botocore/default.nix b/pkgs/development/python-modules/botocore/default.nix index 897e9c884072..e363136615ea 100644 --- a/pkgs/development/python-modules/botocore/default.nix +++ b/pkgs/development/python-modules/botocore/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { name = "${pname}-${version}"; pname = "botocore"; - version = "1.8.36"; + version = "1.8.45"; src = fetchPypi { inherit pname version; - sha256 = "b2c9e0fd6d14910f759a33c19f8315dddedbb3c5569472b7be7ceed4f001a675"; + sha256 = "8f91b648a216dc945783d1539c013fc08a9e65ecc4fc5aae017bdd5961fd3468"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/bpython/default.nix b/pkgs/development/python-modules/bpython/default.nix index f9ab331a3f64..ad80e5647a48 100644 --- a/pkgs/development/python-modules/bpython/default.nix +++ b/pkgs/development/python-modules/bpython/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "bpython"; - version = "0.17"; + version = "0.17.1"; src = fetchPypi { inherit pname version; - sha256 = "1mbah208jhd7bsfaa17fwpi55f7fvif0ghjwgrjmpmx8w1vqab9l"; + sha256 = "8907c510bca3c4d9bc0a157279bdc5e3b739cc68c0f247167279b6fe4becb02f"; }; propagatedBuildInputs = [ curtsies greenlet pygments requests urwid ]; diff --git a/pkgs/development/python-modules/cairocffi/default.nix b/pkgs/development/python-modules/cairocffi/default.nix new file mode 100644 index 000000000000..a8a8ac110f10 --- /dev/null +++ b/pkgs/development/python-modules/cairocffi/default.nix @@ -0,0 +1,58 @@ +# FIXME: make gdk_pixbuf dependency optional +{ buildPythonPackage +, fetchPypi +, lib +, substituteAll +, makeFontsConf +, freefont_ttf +, pytest +, glibcLocales +, cairo +, cffi +, withXcffib ? false, xcffib +, python +, glib +, gdk_pixbuf }: + +buildPythonPackage rec { + pname = "cairocffi"; + version = "0.8.0"; + + src = fetchPypi { + inherit pname version; + sha256 = "0i9m3p39g9wrkpjvpawch2qmnmm3cnim7niz3nmmbcp2hrkixwk5"; + }; + + LC_ALL = "en_US.UTF-8"; + + # checkPhase require at least one 'normal' font and one 'monospace', + # otherwise glyph tests fails + FONTCONFIG_FILE = makeFontsConf { + fontDirectories = [ freefont_ttf ]; + }; + + checkInputs = [ pytest glibcLocales ]; + propagatedBuildInputs = [ cairo cffi ] ++ lib.optional withXcffib xcffib; + + checkPhase = '' + py.test $out/${python.sitePackages} + ''; + + patches = [ + # OSError: dlopen() failed to load a library: gdk_pixbuf-2.0 / gdk_pixbuf-2.0-0 + (substituteAll { + src = ./dlopen-paths.patch; + cairo = cairo.out; + glib = glib.out; + gdk_pixbuf = gdk_pixbuf.out; + }) + ./fix_test_scaled_font.patch + ]; + + meta = with lib; { + homepage = https://github.com/SimonSapin/cairocffi; + license = licenses.bsd3; + maintainers = with maintainers; []; + description = "cffi-based cairo bindings for Python"; + }; +} diff --git a/pkgs/development/python-modules/cement/default.nix b/pkgs/development/python-modules/cement/default.nix index 3fbdb500af80..36cc20e027bb 100644 --- a/pkgs/development/python-modules/cement/default.nix +++ b/pkgs/development/python-modules/cement/default.nix @@ -2,7 +2,6 @@ buildPythonPackage rec { pname = "cement"; - name = "${pname}-${version}"; version = "2.10.2"; src = fetchPypi { diff --git a/pkgs/development/python-modules/channels/default.nix b/pkgs/development/python-modules/channels/default.nix index 36191b95479b..46692999a498 100644 --- a/pkgs/development/python-modules/channels/default.nix +++ b/pkgs/development/python-modules/channels/default.nix @@ -4,11 +4,11 @@ buildPythonPackage rec { pname = "channels"; name = "${pname}-${version}"; - version = "2.0.0"; + version = "2.0.2"; src = fetchPypi { inherit pname version; - sha256 = "c365492b90bd936c763e06cd76bda96cd3e70e5a5d2a196c25754e0c1d8da85a"; + sha256 = "5d41e0f2aa40f9755f36c2c1dd83748b6793732190d577922e06294a3b37fd92"; }; # Files are missing in the distribution diff --git a/pkgs/development/python-modules/cherrypy/default.nix b/pkgs/development/python-modules/cherrypy/default.nix index 5711cdba2b5b..5167cc443194 100644 --- a/pkgs/development/python-modules/cherrypy/default.nix +++ b/pkgs/development/python-modules/cherrypy/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { name = "${pname}-${version}"; pname = "CherryPy"; - version = "13.1.0"; + version = "14.0.0"; src = fetchPypi { inherit pname version; - sha256 = "0pb9mfmhns33jq4nrd38mv88ha74fj3q0y2mm8qsjh7ywphvk9ap"; + sha256 = "5f5ee020d6547a8d452b3560775ca2374ffe2ff8c0aec1b272e93b6af80d850e"; }; propagatedBuildInputs = [ cheroot portend routes six ]; diff --git a/pkgs/development/python-modules/cmd2/default.nix b/pkgs/development/python-modules/cmd2/default.nix new file mode 100644 index 000000000000..5ffa51def0d2 --- /dev/null +++ b/pkgs/development/python-modules/cmd2/default.nix @@ -0,0 +1,49 @@ +{ stdenv, fetchPypi, buildPythonPackage, pythonOlder +, pyperclip, six, pyparsing, vim +, contextlib2 ? null, subprocess32 ? null +, pytest, mock, which, fetchFromGitHub, glibcLocales +}: +buildPythonPackage rec { + pname = "cmd2"; + version = "0.8.0"; + + src = fetchFromGitHub { + owner = "python-cmd2"; + repo = "cmd2"; + rev = version; + sha256 = "0nw2b7n7zg51bc3glxw0l9fn91mwjnjshklhmxhyvjbsg7khf64z"; + }; + + LC_ALL="en_US.UTF-8"; + + postPatch = stdenv.lib.optional stdenv.isDarwin '' + # Fake the impure dependencies pbpaste and pbcopy + mkdir bin + echo '#/bin/sh' > bin/pbpaste + echo '#/bin/sh' > bin/pbcopy + chmod +x bin/{pbcopy,pbpaste} + export PATH=$(realpath bin):$PATH + ''; + + checkInputs= [ pytest mock which vim glibcLocales ]; + checkPhase = '' + # test_path_completion_user_expansion might be fixed in the next release + py.test -k 'not test_path_completion_user_expansion' + ''; + doCheck = !stdenv.isDarwin; + + propagatedBuildInputs = [ + pyperclip + six + pyparsing + ] + ++ stdenv.lib.optional (pythonOlder "3.5") contextlib2 + ++ stdenv.lib.optional (pythonOlder "3.0") subprocess32 + ; + + meta = with stdenv.lib; { + description = "Enhancements for standard library's cmd module"; + homepage = https://github.com/python-cmd2/cmd2; + maintainers = with maintainers; [ teto ]; + }; +} diff --git a/pkgs/development/python-modules/colorama/default.nix b/pkgs/development/python-modules/colorama/default.nix index 99a59ae8fd43..bce14db7704f 100644 --- a/pkgs/development/python-modules/colorama/default.nix +++ b/pkgs/development/python-modules/colorama/default.nix @@ -1,7 +1,6 @@ { stdenv, fetchPypi, buildPythonPackage }: buildPythonPackage rec { - name = "${pname}-${version}"; pname = "colorama"; version = "0.3.9"; diff --git a/pkgs/development/python-modules/configargparse/default.nix b/pkgs/development/python-modules/configargparse/default.nix index 9540b0599315..6a52076252e8 100644 --- a/pkgs/development/python-modules/configargparse/default.nix +++ b/pkgs/development/python-modules/configargparse/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "ConfigArgParse"; - version = "0.12.0"; + version = "0.13.0"; src = fetchPypi { inherit pname version; - sha256 = "0fgkiqh6r3rbkdq3k8c48m85g52k96686rw3a6jg4lcncrkpvk98"; + sha256 = "e6441aa58e23d3d122055808e5e2220fd742dff6e1e51082d2a4e4ed145dd788"; }; # no tests in tarball diff --git a/pkgs/development/python-modules/coverage/default.nix b/pkgs/development/python-modules/coverage/default.nix index 1c58ecb9aa61..8b85a0d94c5a 100644 --- a/pkgs/development/python-modules/coverage/default.nix +++ b/pkgs/development/python-modules/coverage/default.nix @@ -7,12 +7,12 @@ buildPythonPackage rec { pname = "coverage"; - version = "4.4.2"; + version = "4.5.1"; name = "${pname}-${version}"; src = fetchPypi { inherit pname version; - sha256 = "309d91bd7a35063ec7a0e4d75645488bfab3f0b66373e7722f23da7f5b0f34cc"; + sha256 = "56e448f051a201c5ebbaa86a5efd0ca90d327204d8b059ab25ad0f35fbfd79f1"; }; # No tests in archive diff --git a/pkgs/development/python-modules/curtsies/default.nix b/pkgs/development/python-modules/curtsies/default.nix index d9505b384af8..8d6052c5299f 100644 --- a/pkgs/development/python-modules/curtsies/default.nix +++ b/pkgs/development/python-modules/curtsies/default.nix @@ -2,10 +2,10 @@ buildPythonPackage rec { pname = "curtsies"; - version = "0.2.11"; + version = "0.3.0"; src = fetchPypi { inherit pname version; - sha256 = "1vljmw3sy6lrqahhpyg4gk13mzcx3mwhvg8s41698ms3cpgkjipc"; + sha256 = "89c802ec051d01dec6fc983e9856a3706e4ea8265d2940b1f6d504a9e26ed3a9"; }; propagatedBuildInputs = [ blessings wcwidth pyte ]; diff --git a/pkgs/development/python-modules/d2to1/default.nix b/pkgs/development/python-modules/d2to1/default.nix new file mode 100644 index 000000000000..195b20c27e4f --- /dev/null +++ b/pkgs/development/python-modules/d2to1/default.nix @@ -0,0 +1,25 @@ +{ buildPythonPackage +, lib +, fetchFromGitHub +, nose +}: +buildPythonPackage rec { + pname = "d2to1"; + version = "0.2.12"; + + checkInputs = [ nose ]; + + src = fetchFromGitHub { + owner = "embray"; + repo = pname; + rev = version; + sha256 = "1q04ab8vjvx7fmq9ckkl8r9hlwwbqiyjbzaa4v1mv5zicfssxwsi"; + }; + + meta = with lib;{ + description = "Support for distutils2-like setup.cfg files as package metadata"; + homepage = https://github.com/embray/d2to1; + license = licenses.bsd2; + maintainers = with maintainers; [ makefu ]; + }; +} diff --git a/pkgs/development/python-modules/daphne/default.nix b/pkgs/development/python-modules/daphne/default.nix index 6fec8bf882c7..86b00ca74085 100644 --- a/pkgs/development/python-modules/daphne/default.nix +++ b/pkgs/development/python-modules/daphne/default.nix @@ -4,11 +4,11 @@ buildPythonPackage rec { pname = "daphne"; name = "${pname}-${version}"; - version = "2.0.0"; + version = "2.0.3"; src = fetchPypi { inherit pname version; - sha256 = "ecd43a2dd889fb74e16bf8b7f67c076c4ec1b36229ce782272e46c50d56174dd"; + sha256 = "bb2075ce35ca00f2e5440cc034dfebd5c00d346de62ea45f099db089b868c31f"; }; buildInputs = [ hypothesis ]; diff --git a/pkgs/development/python-modules/dask/default.nix b/pkgs/development/python-modules/dask/default.nix index 79e423d4847b..8a8437767d80 100644 --- a/pkgs/development/python-modules/dask/default.nix +++ b/pkgs/development/python-modules/dask/default.nix @@ -12,12 +12,12 @@ buildPythonPackage rec { pname = "dask"; - version = "0.16.1"; + version = "0.17.0"; name = "${pname}-${version}"; src = fetchPypi { inherit pname version; - sha256 = "07a0609ce053c8c2675037e6d5242899f90ecfb5262e1d0b2d7264fe8814099c"; + sha256 = "4d2b0754d16ddc3f87026c1fc4fa3b589d7604a41d3f6510268f172abc1d0a5e"; }; checkInputs = [ pytest ]; diff --git a/pkgs/development/python-modules/dbus/default.nix b/pkgs/development/python-modules/dbus/default.nix index c8f122098da8..a0724c9ada59 100644 --- a/pkgs/development/python-modules/dbus/default.nix +++ b/pkgs/development/python-modules/dbus/default.nix @@ -1,4 +1,4 @@ -{ lib, fetchurl, buildPythonPackage, python, pkgconfig, dbus, dbus_glib, dbus_tools, isPyPy +{ lib, fetchurl, buildPythonPackage, python, pkgconfig, dbus, dbus-glib, dbus_tools, isPyPy , ncurses, pygobject3 }: if isPyPy then throw "dbus-python not supported for interpreter ${python.executable}" else buildPythonPackage rec { @@ -15,7 +15,7 @@ if isPyPy then throw "dbus-python not supported for interpreter ${python.executa postPatch = "patchShebangs ."; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ dbus dbus_glib ] + buildInputs = [ dbus dbus-glib ] ++ lib.optionals doCheck [ dbus_tools pygobject3 ] # My guess why it's sometimes trying to -lncurses. # It seems not to retain the dependency anyway. diff --git a/pkgs/development/python-modules/django-polymorphic/default.nix b/pkgs/development/python-modules/django-polymorphic/default.nix index 1e3d60b765cd..8cb68ed1e7dc 100644 --- a/pkgs/development/python-modules/django-polymorphic/default.nix +++ b/pkgs/development/python-modules/django-polymorphic/default.nix @@ -2,12 +2,12 @@ buildPythonPackage rec { pname = "django-polymorphic"; - version = "2.0"; + version = "2.0.2"; name = "${pname}-${version}"; src = fetchPypi { inherit pname version; - sha256 = "78f666149ea10cdda08ac6c25ddf4b4e582ee380be87e7968bfed008ef39dfa5"; + sha256 = "e1821d7b5874509a158a0f22bebf544330e0944c481c5a3e6da6cac8887e4e88"; }; checkInputs = [ django ]; diff --git a/pkgs/development/python-modules/dmenu/default.nix b/pkgs/development/python-modules/dmenu/default.nix new file mode 100644 index 000000000000..d7ec8161ef5e --- /dev/null +++ b/pkgs/development/python-modules/dmenu/default.nix @@ -0,0 +1,24 @@ +{ buildPythonPackage, lib, fetchPypi, dmenu }: + +buildPythonPackage rec { + pname = "dmenu-python"; + version = "0.2.1"; + + src = fetchPypi { + inherit version; + pname = "dmenu"; + sha256 = "06v2fq0ciallbib7sbk4kncj0n3gdqp1kz8n5k2669x49wyh34wm"; + }; + + propagatedBuildInputs = [ dmenu ]; + + # No tests existing + doCheck = false; + + meta = { + description = "A Python wrapper for dmenu"; + homepage = http://dmenu.readthedocs.io; + license = lib.licenses.mit; + maintainers = [ lib.maintainers.nico202 ]; + }; +} diff --git a/pkgs/development/python-modules/docker/default.nix b/pkgs/development/python-modules/docker/default.nix index 4ce013ac7976..bb39ccd7cf6e 100644 --- a/pkgs/development/python-modules/docker/default.nix +++ b/pkgs/development/python-modules/docker/default.nix @@ -1,14 +1,13 @@ -{ stdenv, buildPythonPackage, fetchurl +{ stdenv, buildPythonPackage, fetchPypi , six, requests, websocket_client , ipaddress, backports_ssl_match_hostname, docker_pycreds }: buildPythonPackage rec { version = "2.7.0"; pname = "docker"; - name = "${pname}-${version}"; - src = fetchurl { - url = "mirror://pypi/d/docker/${name}.tar.gz"; + src = fetchPypi { + inherit pname version; sha256 = "144248308e8ea31c4863c6d74e1b55daf97cc190b61d0fe7b7313ab920d6a76c"; }; diff --git a/pkgs/development/python-modules/docker_compose/default.nix b/pkgs/development/python-modules/docker_compose/default.nix index 9cf4f543e7cc..711babe9518e 100644 --- a/pkgs/development/python-modules/docker_compose/default.nix +++ b/pkgs/development/python-modules/docker_compose/default.nix @@ -11,7 +11,7 @@ buildPythonApplication rec { src = fetchPypi { inherit pname version; - sha256 = "02zgbwf0ffiazswhyangdfhnxia2i43a40rbi67sz2nqnzjf09zj"; + sha256 = "f227e0e4b7d88aaf8f892b03a2068942c56ea16bcf2a0fb9fe2a3a071c5fef0b"; }; # lots of networking and other fails diff --git a/pkgs/development/python-modules/enum-compat/default.nix b/pkgs/development/python-modules/enum-compat/default.nix new file mode 100644 index 000000000000..6b1d2af357a4 --- /dev/null +++ b/pkgs/development/python-modules/enum-compat/default.nix @@ -0,0 +1,21 @@ +{ lib, buildPythonPackage, fetchPypi, enum34 }: + +buildPythonPackage rec { + pname = "enum-compat"; + version = "0.0.2"; + name = "${pname}-${version}"; + + src = fetchPypi { + inherit pname version; + sha256 = "14j1i963jic2vncbf9k5nq1vvv8pw2zsg7yvwhm7d9c6h7qyz74k"; + }; + + propagatedBuildInputs = [ enum34 ]; + + meta = with lib; { + homepage = https://github.com/jstasiak/enum-compat; + description = "enum/enum34 compatibility package"; + license = licenses.mit; + maintainers = with maintainers; [ abbradar ]; + }; +} diff --git a/pkgs/development/python-modules/eve/default.nix b/pkgs/development/python-modules/eve/default.nix index fe6daf73339f..664322362b25 100644 --- a/pkgs/development/python-modules/eve/default.nix +++ b/pkgs/development/python-modules/eve/default.nix @@ -3,12 +3,12 @@ buildPythonPackage rec { pname = "Eve"; - version = "0.7.6"; + version = "0.7.8"; name = "${pname}-${version}"; src = fetchPypi { inherit pname version; - sha256 = "1ba84ab471bc2203a728fe4707a9279c44420224180b418601778125f51577ff"; + sha256 = "af373ab7b9611990d39b090eed372a0860d4e12a1c8a6ef49fdee29e4626053f"; }; patches = [ diff --git a/pkgs/development/python-modules/fiona/default.nix b/pkgs/development/python-modules/fiona/default.nix index 1fc7ae5aa582..bd249dea5d24 100644 --- a/pkgs/development/python-modules/fiona/default.nix +++ b/pkgs/development/python-modules/fiona/default.nix @@ -5,12 +5,12 @@ buildPythonPackage rec { pname = "Fiona"; - version = "1.7.11"; + version = "1.7.11.post1"; name = "${pname}-${version}"; src = fetchPypi { inherit pname version; - sha256 = "5e9c68ea71e9d79fcfb68c9a101c0b133301e233c9bcca7b7c65f33cc7636ef5"; + sha256 = "35df044fa805e6b420450f5d4281fc0edf96e1da0545c31032045cd3cfad3abf"; }; buildInputs = [ diff --git a/pkgs/development/python-modules/flake8-debugger/default.nix b/pkgs/development/python-modules/flake8-debugger/default.nix index aab914330880..9d69c0389b69 100644 --- a/pkgs/development/python-modules/flake8-debugger/default.nix +++ b/pkgs/development/python-modules/flake8-debugger/default.nix @@ -3,10 +3,10 @@ buildPythonPackage rec { pname = "flake8-debugger"; name = "${pname}-${version}"; - version = "3.0.0"; + version = "3.1.0"; src = fetchurl { url = "mirror://pypi/f/flake8-debugger/${name}.tar.gz"; - sha256 = "e5c8ac980d819db2f3fbb89fe0e43a2fe6c127edd6ce4984a3f7e0bbdac3d2d4"; + sha256 = "be4fb88de3ee8f6dd5053a2d347e2c0a2b54bab6733a2280bb20ebd3c4ca1d97"; }; buildInputs = [ nose ]; propagatedBuildInputs = [ flake8 ]; diff --git a/pkgs/development/python-modules/flask-assets/default.nix b/pkgs/development/python-modules/flask-assets/default.nix new file mode 100644 index 000000000000..53307333048e --- /dev/null +++ b/pkgs/development/python-modules/flask-assets/default.nix @@ -0,0 +1,20 @@ +{ lib, buildPythonPackage, fetchurl, flask, webassets, flask_script, nose }: + +buildPythonPackage rec { + name = "Flask-Assets-${version}"; + version = "0.12"; + + src = fetchurl { + url = "mirror://pypi/F/Flask-Assets/${name}.tar.gz"; + sha256 = "0ivqsihk994rxw58vdgzrx4d77d7lpzjm4qxb38hjdgvi5xm4cb0"; + }; + + propagatedBuildInputs = [ flask webassets flask_script nose ]; + + meta = with lib; { + homepage = http://github.com/miracle2k/flask-assets; + description = "Asset management for Flask, to compress and merge CSS and Javascript files"; + license = licenses.bsd2; + maintainers = with maintainers; [ abbradar ]; + }; +} diff --git a/pkgs/development/python-modules/flask-login/default.nix b/pkgs/development/python-modules/flask-login/default.nix index 3c7731c30a8b..e2585262e58e 100644 --- a/pkgs/development/python-modules/flask-login/default.nix +++ b/pkgs/development/python-modules/flask-login/default.nix @@ -1,19 +1,19 @@ { stdenv, buildPythonPackage, fetchFromGitHub, pythonAtLeast -, flask, nose, mock, blinker}: +, flask, blinker, nose, mock, semantic-version }: buildPythonPackage rec { pname = "Flask-Login"; name = "${pname}-${version}"; - version = "0.4.0"; + version = "0.4.1"; src = fetchFromGitHub { owner = "maxcountryman"; repo = "flask-login"; rev = version; - sha256 = "0sjbmk8m4mmd9g99n6c6lx9nv2jwwqp6qsqhl945w2m0f1sknwdh"; + sha256 = "1rj0qwyxapxnp84fi4lhmvh3d91fdiwz7hibw77x3d5i72knqaa9"; }; - buildInputs = [ nose mock ]; + checkInputs = [ nose mock semantic-version ]; propagatedBuildInputs = [ flask blinker ]; checkPhase = "nosetests -d"; diff --git a/pkgs/development/python-modules/flask-principal/default.nix b/pkgs/development/python-modules/flask-principal/default.nix new file mode 100644 index 000000000000..1f41f7987631 --- /dev/null +++ b/pkgs/development/python-modules/flask-principal/default.nix @@ -0,0 +1,22 @@ +{ lib, buildPythonPackage, fetchurl, flask, blinker, nose }: + +buildPythonPackage rec { + name = "Flask-Principal-${version}"; + version = "0.4.0"; + + src = fetchurl { + url = "mirror://pypi/F/Flask-Principal/${name}.tar.gz"; + sha256 = "0lwlr5smz8vfm5h9a9i7da3q1c24xqc6vm9jdywdpgxfbi5i7mpm"; + }; + + propagatedBuildInputs = [ flask blinker ]; + + checkInputs = [ nose ]; + + meta = with lib; { + homepage = http://packages.python.org/Flask-Principal/; + description = "Identity management for flask"; + license = licenses.bsd2; + maintainers = with maintainers; [ abbradar ]; + }; +} diff --git a/pkgs/development/python-modules/flask-script/default.nix b/pkgs/development/python-modules/flask-script/default.nix new file mode 100644 index 000000000000..ace3cee2d22e --- /dev/null +++ b/pkgs/development/python-modules/flask-script/default.nix @@ -0,0 +1,21 @@ +{ lib, buildPythonPackage, fetchurl, flask, pytest }: + +buildPythonPackage rec { + name = "Flask-Script-${version}"; + version = "2.0.6"; + + src = fetchurl { + url = "mirror://pypi/F/Flask-Script/${name}.tar.gz"; + sha256 = "0zqh2yq8zk7m9b4xw1ryqmrljkdigfb3hk5155a3b5hkfnn6xxyf"; + }; + + propagatedBuildInputs = [ flask ]; + checkInputs = [ pytest ]; + + meta = with lib; { + homepage = http://github.com/smurfix/flask-script; + description = "Scripting support for Flask"; + license = licenses.bsd3; + maintainers = with maintainers; [ abbradar ]; + }; +} diff --git a/pkgs/development/python-modules/fonttools/default.nix b/pkgs/development/python-modules/fonttools/default.nix index 80fc3893f17c..a8a89f0e8ca7 100644 --- a/pkgs/development/python-modules/fonttools/default.nix +++ b/pkgs/development/python-modules/fonttools/default.nix @@ -7,12 +7,12 @@ buildPythonPackage rec { pname = "fonttools"; - version = "3.21.2"; + version = "3.22.0"; name = "${pname}-${version}"; src = fetchPypi { inherit pname version; - sha256 = "96b636793c806206b1925e21224f4ab2ce5bea8ae0990ed181b8ac8d30848f47"; + sha256 = "01640dfbc0ba752181b21fe74240b8a7bbf7af75581737245836ada5565bd549"; extension = "zip"; }; diff --git a/pkgs/development/python-modules/globus-sdk/default.nix b/pkgs/development/python-modules/globus-sdk/default.nix index 4f36a5c1b771..789cfaaea7aa 100644 --- a/pkgs/development/python-modules/globus-sdk/default.nix +++ b/pkgs/development/python-modules/globus-sdk/default.nix @@ -10,11 +10,11 @@ buildPythonPackage rec { pname = "globus-sdk"; - version = "1.4.1"; + version = "1.5.0"; src = fetchPypi { inherit pname version; - sha256 = "1nwdhhn9ib5ln56q8h3g42dl93jl67xlxkgl1wqkh7pacg00r4vs"; + sha256 = "f3ee8294c11f0d1a4430ae7534236c6a6837312f1b4056adbb183a3af663d2be"; }; checkPhase = '' diff --git a/pkgs/development/python-modules/google_auth/default.nix b/pkgs/development/python-modules/google_auth/default.nix index 2076f3c34441..ef101077eaab 100644 --- a/pkgs/development/python-modules/google_auth/default.nix +++ b/pkgs/development/python-modules/google_auth/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "google-auth"; - version = "1.3.0"; + version = "1.4.1"; src = fetchPypi { inherit pname version; - sha256 = "d119b5954393d81c4a986ab420cf2c8129fc95ff5c4c6bb8ab5c8f3e6446394f"; + sha256 = "9051802d3dae256036cca9e34633a32c0ed1427730d4ebc513dff91ec8b6dd45"; }; checkInputs = [ pytest mock oauth2client flask requests urllib3 pytest-localserver ]; diff --git a/pkgs/development/python-modules/google_cloud_speech/default.nix b/pkgs/development/python-modules/google_cloud_speech/default.nix index a388c0fa70cb..c24e0d88067b 100644 --- a/pkgs/development/python-modules/google_cloud_speech/default.nix +++ b/pkgs/development/python-modules/google_cloud_speech/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "google-cloud-speech"; - version = "0.31.0"; + version = "0.32.0"; src = fetchPypi { inherit pname version; - sha256 = "b0f6a542165750e42b1c92e6c465e8dc35c38d138ae7f08174971ab9b0df2a71"; + sha256 = "2513725e693c3a2fdf22cb3065f3fcb39de2ab962a0cbc5de11a3889834189e1"; }; propagatedBuildInputs = [ setuptools google_api_core google_gax google_cloud_core ]; diff --git a/pkgs/development/python-modules/grip/default.nix b/pkgs/development/python-modules/grip/default.nix new file mode 100644 index 000000000000..c11bcaa5baa5 --- /dev/null +++ b/pkgs/development/python-modules/grip/default.nix @@ -0,0 +1,51 @@ +{ stdenv +, fetchFromGitHub +, fetchpatch +# Python bits: +, buildPythonPackage +, pytest +, responses +, docopt +, flask +, markdown +, path-and-address +, pygments +, requests +, tabulate +}: + +buildPythonPackage rec { + pname = "grip"; + version = "4.4.0"; + + src = fetchFromGitHub { + owner = "joeyespo"; + repo = "grip"; + rev = "v${version}"; + sha256 = "1768n3w40qg1njkzqjyl5gkva0h31k8h250821v69imj1zimymag"; + }; + + patches = [ + # Render "front matter", used in our RFC template and elsewhere + (fetchpatch { + url = https://github.com/joeyespo/grip/pull/249.patch; + sha256 = "07za5iymfv647dfrvi6hhj54a96hgjyarys51zbi08c51shqyzpg"; + }) + ]; + + checkInputs = [ pytest responses ]; + + propagatedBuildInputs = [ docopt flask markdown path-and-address pygments requests tabulate ]; + + checkPhase = '' + export PATH="$PATH:$out/bin" + py.test -xm "not assumption" + ''; + + meta = with stdenv.lib; { + description = "Preview GitHub Markdown files like Readme locally before committing them"; + homepage = https://github.com/joeyespo/grip; + license = licenses.mit; + maintainers = with maintainers; [ koral ]; + }; +} diff --git a/pkgs/development/python-modules/grpcio/default.nix b/pkgs/development/python-modules/grpcio/default.nix index ea59bedc0359..d1f0903238c7 100644 --- a/pkgs/development/python-modules/grpcio/default.nix +++ b/pkgs/development/python-modules/grpcio/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "grpcio"; - version = "1.9.0"; + version = "1.9.1"; src = fetchPypi { inherit pname version; - sha256 = "b61d3a7c45aa08f15dfa735a6a8282b5097be91ff36ad347594d3945ffc12181"; + sha256 = "e7c43b5619deff48cc177c1b0618c4beeb2797f910f160e3c2035d5baf790a5d"; }; propagatedBuildInputs = [ six protobuf ] diff --git a/pkgs/development/python-modules/gssapi/default.nix b/pkgs/development/python-modules/gssapi/default.nix index b075db5ae987..bab965b5a9c1 100644 --- a/pkgs/development/python-modules/gssapi/default.nix +++ b/pkgs/development/python-modules/gssapi/default.nix @@ -3,12 +3,12 @@ nose, shouldbe, gss, krb5Full, which, darwin }: buildPythonPackage rec { pname = "gssapi"; - version = "1.3.0"; + version = "1.4.1"; name = "${pname}-${version}"; src = fetchPypi { inherit pname version; - sha256 = "765205082a9490c8e8be88ac16a6249d124396a671665edeec9927a7f244d712"; + sha256 = "be8f37dd9da726db375b9c693e0a63b391d381d903516e79ecc2a2cc965580e4"; }; # It's used to locate headers diff --git a/pkgs/development/python-modules/h5py/default.nix b/pkgs/development/python-modules/h5py/default.nix index bdbdcdcc2e74..54cfb5dc93ba 100644 --- a/pkgs/development/python-modules/h5py/default.nix +++ b/pkgs/development/python-modules/h5py/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, python, buildPythonPackage +{ stdenv, fetchPypi, fetchpatch, python, buildPythonPackage , numpy, hdf5, cython, six, pkgconfig , mpi4py ? null, openssh }: @@ -9,14 +9,12 @@ with stdenv.lib; let mpi = hdf5.mpi; mpiSupport = hdf5.mpiSupport; - in buildPythonPackage rec { version = "2.7.1"; pname = "h5py"; - name = "${pname}-${version}"; - src = fetchurl { - url = "mirror://pypi/h/h5py/${name}.tar.gz"; + src = fetchPypi { + inherit pname version; sha256 = "180a688311e826ff6ae6d3bda9b5c292b90b28787525ddfcb10a29d5ddcae2cc"; }; @@ -34,11 +32,15 @@ in buildPythonPackage rec { nativeBuildInputs = [ pkgconfig ]; buildInputs = [ hdf5 cython ] - ++ optional mpiSupport mpi - ; + ++ optional mpiSupport mpi; propagatedBuildInputs = [ numpy six] - ++ optionals mpiSupport [ mpi4py openssh ] - ; + ++ optionals mpiSupport [ mpi4py openssh ]; + + patches = [ + # Patch is based on upstream patch. The tox.ini hunk had to be removed. + # https://github.com/h5py/h5py/commit/5009e062a6f7d4e074cab0fcb42a780ac2b1d7d4.patch + ./numpy-1.14.patch + ]; meta = { description = diff --git a/pkgs/development/python-modules/h5py/numpy-1.14.patch b/pkgs/development/python-modules/h5py/numpy-1.14.patch new file mode 100644 index 000000000000..e1db7e05808d --- /dev/null +++ b/pkgs/development/python-modules/h5py/numpy-1.14.patch @@ -0,0 +1,94 @@ +From 5009e062a6f7d4e074cab0fcb42a780ac2b1d7d4 Mon Sep 17 00:00:00 2001 +From: James Tocknell +Date: Thu, 28 Dec 2017 20:55:55 +1100 +Subject: [PATCH] FIX: Don't reorder compound types, breaks on numpy 1.14 + +--- + h5py/h5t.pyx | 25 +++++++------------------ + setup.py | 2 +- + tox.ini | 4 ++-- + 3 files changed, 10 insertions(+), 21 deletions(-) + +diff --git a/h5py/h5t.pyx b/h5py/h5t.pyx +index cc2344e1..7445e9eb 100644 +--- a/h5py/h5t.pyx ++++ b/h5py/h5t.pyx +@@ -1136,12 +1136,6 @@ cdef class TypeCompoundID(TypeCompositeID): + else: + if sys.version[0] == '3': + field_names = [x.decode('utf8') for x in field_names] +- if len(field_names) > 0: +- collated_fields = zip(field_names, field_types, field_offsets) +- ordered_fields = sorted( +- collated_fields, key=operator.itemgetter(2)) +- field_names, field_types, field_offsets = \ +- map(list, zip(*ordered_fields)) + typeobj = dtype({ + 'names': field_names, + 'formats': field_types, +@@ -1458,8 +1452,7 @@ cdef TypeCompoundID _c_compound(dtype dt, int logical, int aligned): + cdef dtype member_dt + cdef size_t member_offset = 0 + +- cdef dict offsets = {} +- cdef list fields = [] ++ cdef dict fields = {} + + # The challenge with correctly converting a numpy/h5py dtype to a HDF5 type + # which is composed of subtypes has three aspects we must consider +@@ -1468,19 +1461,14 @@ cdef TypeCompoundID _c_compound(dtype dt, int logical, int aligned): + # 2. For correct round-tripping of aligned dtypes, we need to consider how + # much padding we need by looking at the field offsets + # 3. There is no requirement that the offsets be monotonically increasing +- # (so we start by sorting the names as a function of increasing offset) + # + # The code below tries to cover these aspects + +- # Get offsets for each compound member +- for name, field in dt.fields.items(): +- offsets[name] = field[1] +- + # Build list of names, offsets, and types, sorted by increasing offset + # (i.e. the position of the member in the struct) +- for name in sorted(dt.names, key=offsets.__getitem__): ++ for name in sorted(dt.names, key=(lambda n: dt.fields[n][1])): + field = dt.fields[name] +- name = name.encode('utf8') if isinstance(name, unicode) else name ++ h5_name = name.encode('utf8') if isinstance(name, unicode) else name + + # Get HDF5 data types and set the offset for each member + member_dt = field[0] +@@ -1489,7 +1477,7 @@ cdef TypeCompoundID _c_compound(dtype dt, int logical, int aligned): + if aligned and (member_offset > field[1] + or member_dt.itemsize != member_type.get_size()): + raise TypeError("Enforced alignment not compatible with HDF5 type") +- fields.append((name, member_offset, member_type)) ++ fields[name] = (h5_name, member_offset, member_type) + + # Update member offset based on the HDF5 type size + member_offset += member_type.get_size() +@@ -1500,8 +1488,9 @@ cdef TypeCompoundID _c_compound(dtype dt, int logical, int aligned): + + # Create compound with the necessary size, and insert its members + tid = H5Tcreate(H5T_COMPOUND, member_offset) +- for (name, member_offset, member_type) in fields: +- H5Tinsert(tid, name, member_offset, member_type.id) ++ for name in dt.names: ++ h5_name, member_offset, member_type = fields[name] ++ H5Tinsert(tid, h5_name, member_offset, member_type.id) + + return TypeCompoundID(tid) + +diff --git a/setup.py b/setup.py +index ec2a78a7..bbb086f6 100755 +--- a/setup.py ++++ b/setup.py +@@ -32,7 +32,7 @@ + # these are required to build h5py + # RUN_REQUIRES is included as setup.py test needs RUN_REQUIRES for testing + # RUN_REQUIRES can be removed when setup.py test is removed +-SETUP_REQUIRES = RUN_REQUIRES + [NUMPY_DEP, 'Cython>=0.19', 'pkgconfig'] ++SETUP_REQUIRES = RUN_REQUIRES + [NUMPY_DEP, 'Cython>=0.23', 'pkgconfig'] + + # Needed to avoid trying to install numpy/cython on pythons which the latest + # versions don't support diff --git a/pkgs/development/python-modules/hmmlearn/default.nix b/pkgs/development/python-modules/hmmlearn/default.nix index 3295786bd08c..e0294c2afca4 100644 --- a/pkgs/development/python-modules/hmmlearn/default.nix +++ b/pkgs/development/python-modules/hmmlearn/default.nix @@ -16,7 +16,7 @@ buildPythonPackage rec { meta = with lib; { description = "Hidden Markov Models in Python with scikit-learn like API"; - homepage = "https://github.com/hmmlearn/hmmlearn"; + homepage = https://github.com/hmmlearn/hmmlearn; license = licenses.bsd3; maintainers = with maintainers; [ abbradar ]; platforms = platforms.unix; diff --git a/pkgs/development/python-modules/hypothesis/default.nix b/pkgs/development/python-modules/hypothesis/default.nix index 91939d146887..d5ee59ac2d92 100644 --- a/pkgs/development/python-modules/hypothesis/default.nix +++ b/pkgs/development/python-modules/hypothesis/default.nix @@ -1,5 +1,5 @@ -{ stdenv, buildPythonPackage, fetchFromGitHub, python -, pythonOlder, pythonAtLeast, enum34 +{ lib, buildPythonPackage, fetchFromGitHub, python +, isPy3k, attrs, coverage, enum34 , doCheck ? true, pytest, pytest_xdist, flake8, flaky, mock }: buildPythonPackage rec { @@ -9,20 +9,19 @@ buildPythonPackage rec { # pytz fake_factory django numpy pytest # If you need these, you can just add them to your environment. - version = "3.27.0"; + version = "3.45.2"; pname = "hypothesis"; - name = "${pname}-${version}"; # Upstream prefers github tarballs src = fetchFromGitHub { owner = "HypothesisWorks"; repo = "hypothesis-python"; - rev = "${version}"; - sha256 = "1lvhd8jrwajyc5w1alb9vinsi97fjfqpkxkh8g8j527831lig0j0"; - }; + rev = version; + sha256 = "063sn5m1966gvm3wrlxczdq4vw0r94h3nd9xpr94qxahpg2r4bpb"; + }; - checkInputs = stdenv.lib.optionals doCheck [ pytest pytest_xdist flake8 flaky mock]; - propagatedBuildInputs = stdenv.lib.optionals (pythonOlder "3.4") [ enum34 ]; + checkInputs = [ pytest pytest_xdist flaky mock ]; + propagatedBuildInputs = [ attrs coverage ] ++ lib.optional (!isPy3k) [ enum34 ]; inherit doCheck; @@ -32,11 +31,7 @@ buildPythonPackage rec { py.test tests/cover ''; - # Unsupport by upstream on certain versions - # https://github.com/HypothesisWorks/hypothesis-python/issues/477 - disabled = pythonOlder "3.4" && pythonAtLeast "2.8"; - - meta = with stdenv.lib; { + meta = with lib; { description = "A Python library for property based testing"; homepage = https://github.com/HypothesisWorks/hypothesis; license = licenses.mpl20; diff --git a/pkgs/development/python-modules/ipykernel/default.nix b/pkgs/development/python-modules/ipykernel/default.nix index 330141fcd06e..018a522a591a 100644 --- a/pkgs/development/python-modules/ipykernel/default.nix +++ b/pkgs/development/python-modules/ipykernel/default.nix @@ -13,12 +13,12 @@ buildPythonPackage rec { pname = "ipykernel"; - version = "4.8.0"; + version = "4.8.1"; name = "${pname}-${version}"; src = fetchPypi { inherit pname version; - sha256 = "dedc199df6a38725c732986dfa606c245fb8fe0fe999b33a0c305b73d80c6774"; + sha256 = "fe2837622a4121cbe42b354db1e2ab46c91e807ffcb92f4c2cfd323a75f8737f"; }; buildInputs = [ nose ] ++ lib.optional isPy27 mock; diff --git a/pkgs/development/python-modules/ipyparallel/default.nix b/pkgs/development/python-modules/ipyparallel/default.nix index 3e8ea0489207..e4765a29e835 100644 --- a/pkgs/development/python-modules/ipyparallel/default.nix +++ b/pkgs/development/python-modules/ipyparallel/default.nix @@ -16,12 +16,12 @@ buildPythonPackage rec { pname = "ipyparallel"; - version = "6.0.2"; + version = "6.1.1"; name = "${pname}-${version}"; src = fetchPypi { inherit pname version; - sha256 = "7eea4780266252fcc987b220a302d589fbb4d6b0569bd131115a20b31891103d"; + sha256 = "f1e03ebb8d17f67f03bafa5d85f220883462f7bd7a97fe904c7d56ffba8534a3"; }; buildInputs = [ nose ]; diff --git a/pkgs/development/python-modules/ipywidgets/default.nix b/pkgs/development/python-modules/ipywidgets/default.nix index b41f70c073c0..c504062cba61 100644 --- a/pkgs/development/python-modules/ipywidgets/default.nix +++ b/pkgs/development/python-modules/ipywidgets/default.nix @@ -14,12 +14,12 @@ buildPythonPackage rec { pname = "ipywidgets"; - version = "7.1.1"; + version = "7.1.2"; name = "${pname}-${version}"; src = fetchPypi { inherit pname version; - sha256 = "69e8c444e99601e6f9b9e9e596c87c19665fc73c2dd05cd507c94f35fba2959d"; + sha256 = "4263ce721a1e5b53a84c4595a5e296d270ae0dc534401b536f4dda64e0b0ca02"; }; # Tests are not distributed diff --git a/pkgs/development/python-modules/jsonpickle/default.nix b/pkgs/development/python-modules/jsonpickle/default.nix index 2d9f02a5affb..3a0f72377302 100644 --- a/pkgs/development/python-modules/jsonpickle/default.nix +++ b/pkgs/development/python-modules/jsonpickle/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "jsonpickle"; - version = "0.9.5"; + version = "0.9.6"; src = fetchPypi { inherit pname version; - sha256 = "cc25dc79571d4ad7db59d05ddb7de0d76a8d598cf6136e1dbeaa9361ebcfe749"; + sha256 = "545b3bee0d65e1abb4baa1818edcc9ec239aa9f2ffbfde8084d71c056180054f"; }; doCheck = false; diff --git a/pkgs/development/python-modules/jsonrpc-async/default.nix b/pkgs/development/python-modules/jsonrpc-async/default.nix new file mode 100644 index 000000000000..1018c536ff7d --- /dev/null +++ b/pkgs/development/python-modules/jsonrpc-async/default.nix @@ -0,0 +1,21 @@ +{ stdenv, buildPythonPackage, fetchPypi +, aiohttp, jsonrpc-base }: + +buildPythonPackage rec { + pname = "jsonrpc-async"; + version = "0.6"; + + src = fetchPypi { + inherit pname version; + sha256 = "0f1p3qv56jn4sdyp8gzf915nya6vr0rn2pbzld9x23y9jdjmibzw"; + }; + + propagatedBuildInputs = [ aiohttp jsonrpc-base ]; + + meta = with stdenv.lib; { + description = "A JSON-RPC client library for asyncio"; + homepage = http://github.com/armills/jsonrpc-async; + license = licenses.bsd3; + maintainers = with maintainers; [ peterhoeg ]; + }; +} diff --git a/pkgs/development/python-modules/jsonrpc-base/default.nix b/pkgs/development/python-modules/jsonrpc-base/default.nix new file mode 100644 index 000000000000..8dbe07382889 --- /dev/null +++ b/pkgs/development/python-modules/jsonrpc-base/default.nix @@ -0,0 +1,20 @@ +{ stdenv, buildPythonPackage, fetchPypi }: + +buildPythonPackage rec { + pname = "jsonrpc-base"; + version = "1.0"; + + src = fetchPypi { + inherit pname version; + sha256 = "1dl55n54ha5kf4x6hap2p1k3s4qa4w7g791wp2656rjg2zxfgywk"; + }; + + propagatedBuildInputs = [ ]; + + meta = with stdenv.lib; { + description = "A JSON-RPC client library base interface"; + homepage = https://github.com/armills/jsonrpc-base; + license = licenses.bsd3; + maintainers = with maintainers; [ peterhoeg ]; + }; +} diff --git a/pkgs/development/python-modules/jsonrpc-websocket/default.nix b/pkgs/development/python-modules/jsonrpc-websocket/default.nix new file mode 100644 index 000000000000..b8a0c07d5a5d --- /dev/null +++ b/pkgs/development/python-modules/jsonrpc-websocket/default.nix @@ -0,0 +1,21 @@ +{ stdenv, buildPythonPackage, fetchPypi +, aiohttp, jsonrpc-base }: + +buildPythonPackage rec { + pname = "jsonrpc-websocket"; + version = "0.5"; + + src = fetchPypi { + inherit pname version; + sha256 = "0cijqb8fvv9iq5ds9y5sj0gd6lapi90mgqvpkczp28fxz440ihq4"; + }; + + propagatedBuildInputs = [ aiohttp jsonrpc-base ]; + + meta = with stdenv.lib; { + description = "A JSON-RPC websocket client library for asyncio"; + homepage = https://github.com/armills/jsonrpc-websocket; + license = licenses.bsd3; + maintainers = with maintainers; [ peterhoeg ]; + }; +} diff --git a/pkgs/development/python-modules/jupyterhub-ldapauthenticator/default.nix b/pkgs/development/python-modules/jupyterhub-ldapauthenticator/default.nix new file mode 100644 index 000000000000..02348c68e07a --- /dev/null +++ b/pkgs/development/python-modules/jupyterhub-ldapauthenticator/default.nix @@ -0,0 +1,28 @@ +{ lib +, buildPythonPackage +, jupyterhub +, ldap3 +, fetchPypi +}: + +buildPythonPackage rec { + pname = "jupyterhub-ldapauthenticator"; + version = "1.1"; + + src = fetchPypi { + inherit pname version; + sha256 = "19dz3a3122wln8lkixj5jbh9x3cqlrcb3p7a53825cj72cmpcxwz"; + }; + + # No tests implemented + doCheck = false; + + propagatedBuildInputs = [ jupyterhub ldap3 ]; + + meta = with lib; { + description = "Simple LDAP Authenticator Plugin for JupyterHub"; + homepage = https://github.com/jupyterhub/ldapauthenticator; + license = licenses.bsd3; + maintainers = with maintainers; [ ixxie ]; + }; +} diff --git a/pkgs/development/python-modules/kaitaistruct/default.nix b/pkgs/development/python-modules/kaitaistruct/default.nix index c99619566175..0863cd79f46e 100644 --- a/pkgs/development/python-modules/kaitaistruct/default.nix +++ b/pkgs/development/python-modules/kaitaistruct/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { name = "${pname}-${version}"; pname = "kaitaistruct"; - version = "0.7"; + version = "0.8"; src = fetchPypi { inherit pname version; - sha256 = "19j3snmr0qbd48f7yd3cc21ffv13dahf8ys591dnalbhvnkar71i"; + sha256 = "d1d17c7f6839b3d28fc22b21295f787974786c2201e8788975e72e2a1d109ff5"; }; meta = with stdenv.lib; { diff --git a/pkgs/development/python-modules/keras/default.nix b/pkgs/development/python-modules/keras/default.nix index 8ef263cdfa80..4c42a4ebafea 100644 --- a/pkgs/development/python-modules/keras/default.nix +++ b/pkgs/development/python-modules/keras/default.nix @@ -5,12 +5,12 @@ buildPythonPackage rec { pname = "Keras"; - version = "2.1.3"; + version = "2.1.4"; name = "${pname}-${version}"; src = fetchPypi { inherit pname version; - sha256 = "7ca3a381523bad40a6922e88951a316664cb088fd01cea07e5ec8ada3327e3c7"; + sha256 = "7ee1fcc79072ac904a4f008d715bcb78c60250ae3cd41d99e268c60ade8d0d3a"; }; checkInputs = [ diff --git a/pkgs/development/python-modules/kubernetes/default.nix b/pkgs/development/python-modules/kubernetes/default.nix new file mode 100644 index 000000000000..5566eea64eb8 --- /dev/null +++ b/pkgs/development/python-modules/kubernetes/default.nix @@ -0,0 +1,38 @@ +{ stdenv, buildPythonPackage, fetchPypi, pythonAtLeast, + ipaddress, websocket_client, urllib3, pyyaml, requests_oauthlib, python-dateutil, google_auth, + isort, pytest, coverage, mock, sphinx, autopep8, pep8, codecov, recommonmark, nose }: + +buildPythonPackage rec { + pname = "kubernetes"; + version = "5.0.0"; + + prePatch = '' + sed -e 's/sphinx>=1.2.1,!=1.3b1,<1.4 # BSD/sphinx/' -i test-requirements.txt + + # This is used to randomize tests, which is not reproducible. Drop it. + sed -e '/randomize/d' -i test-requirements.txt + '' + # This is a python2 and python3.2 only requiremet since it is a backport of a python-3.3 api. + + (if (pythonAtLeast "3.3") then '' + sed -e '/ipaddress/d' -i requirements.txt + '' else ""); + + checkPhase = '' + py.test + ''; + + src = fetchPypi { + inherit pname version; + sha256 = "1z8rrlq73bzli9rg57kj8ivz09vhsydyjq1ksbcis6j7h9c187zq"; + }; + + checkInputs = [ isort coverage pytest mock sphinx autopep8 pep8 codecov recommonmark nose ]; + propagatedBuildInputs = [ ipaddress websocket_client urllib3 pyyaml requests_oauthlib python-dateutil google_auth ]; + + meta = with stdenv.lib; { + description = "Kubernetes python client"; + homepage = https://github.com/kubernetes-client/python; + license = licenses.asl20; + maintainers = with maintainers; [ lsix ]; + }; +} diff --git a/pkgs/development/python-modules/libagent/default.nix b/pkgs/development/python-modules/libagent/default.nix index d6c96534d748..757a171d8381 100644 --- a/pkgs/development/python-modules/libagent/default.nix +++ b/pkgs/development/python-modules/libagent/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { name = "${pname}-${version}"; pname = "libagent"; - version = "0.9.7"; + version = "0.9.8"; src = fetchPypi{ inherit pname version; - sha256 = "3ae14dc14859f7b4b92583ab0d40884ac07f26dbe00c7b747df2d50f4b1af098"; + sha256 = "7e7d62cedef9d1291b8e77abc463d50b3d685dfd953611d55a0414c12276aa78"; }; buildInputs = [ diff --git a/pkgs/development/python-modules/libarcus/default.nix b/pkgs/development/python-modules/libarcus/default.nix index 789beaa2384c..d9cc5fb0d9e5 100644 --- a/pkgs/development/python-modules/libarcus/default.nix +++ b/pkgs/development/python-modules/libarcus/default.nix @@ -7,13 +7,13 @@ else stdenv.mkDerivation rec { pname = "libarcus"; name = "${pname}-${version}"; - version = "3.0.3"; + version = "3.2.1"; src = fetchFromGitHub { owner = "Ultimaker"; repo = "libArcus"; rev = version; - sha256 = "05dpd6nx32nws0ghsm365wlsb8hg2s3v9fqcmdk11biwfhnr6rjw"; + sha256 = "0mln8myvfl7rq2p4g1vadvlykckd8490jijag4xa5hhj3w3p19bk"; }; propagatedBuildInputs = [ sip protobuf ]; diff --git a/pkgs/development/python-modules/libgpuarray/default.nix b/pkgs/development/python-modules/libgpuarray/default.nix index 67353a32ada6..c0c2b205f58b 100644 --- a/pkgs/development/python-modules/libgpuarray/default.nix +++ b/pkgs/development/python-modules/libgpuarray/default.nix @@ -15,14 +15,14 @@ buildPythonPackage rec { pname = "libgpuarray"; - version = "0.6.9"; + version = "0.7.5"; name = pname + "-" + version; src = fetchFromGitHub { owner = "Theano"; repo = "libgpuarray"; rev = "v${version}"; - sha256 = "06z47ls42a37gbv0x7f3l1qvils7q0hvy02s95l530klgibp19s0"; + sha256 = "0zkdwjq3k6ciiyf8y5w663fbsnmzhgy27yvpxfhkpxazw9vg3l5v"; }; # requires a GPU @@ -40,7 +40,6 @@ buildPythonPackage rec { make -j$NIX_BUILD_CORES make install - ls $out/lib export NIX_CFLAGS_COMPILE="-L $out/lib -I $out/include $NIX_CFLAGS_COMPILE" cd .. diff --git a/pkgs/development/python-modules/m2r/default.nix b/pkgs/development/python-modules/m2r/default.nix index e493596cfa59..c1a6721bb804 100644 --- a/pkgs/development/python-modules/m2r/default.nix +++ b/pkgs/development/python-modules/m2r/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "m2r"; name = "${pname}-${version}"; - version = "0.1.12"; + version = "0.1.13"; src = fetchPypi { inherit pname version; - sha256 = "adfb86ebb7ff3fcd3ebb27ce8cd6f795c409a13f0c03363e265f17419ce5b9ab"; + sha256 = "b19e3703a3a897859f01ff6a068ee9a0eea8e8fdf75e896e00e88b3476a12f87"; }; propagatedBuildInputs = [ mistune docutils ]; diff --git a/pkgs/development/python-modules/magic-wormhole-transit-relay/default.nix b/pkgs/development/python-modules/magic-wormhole-transit-relay/default.nix new file mode 100644 index 000000000000..e6be19198efb --- /dev/null +++ b/pkgs/development/python-modules/magic-wormhole-transit-relay/default.nix @@ -0,0 +1,25 @@ +{ lib, buildPythonPackage, fetchPypi, twisted, mock }: + +buildPythonPackage rec { + pname = "magic-wormhole-transit-relay"; + version = "0.1.1"; + + src = fetchPypi { + inherit pname version; + sha256 = "faac36266c72745102a1a8b93abc5b25feed1be5bca7b29968a156966c312567"; + }; + + propagatedBuildInputs = [ twisted ]; + + checkInputs = [ mock ]; + + checkPhase = '' + python -m twisted.trial wormhole_transit_relay + ''; + + meta = with lib; { + description = "Transit Relay server for Magic-Wormhole"; + homepage = https://github.com/warner/magic-wormhole-transit-relay; + license = licenses.mit; + }; +} diff --git a/pkgs/development/python-modules/magic-wormhole/default.nix b/pkgs/development/python-modules/magic-wormhole/default.nix index 6afe4cba00d4..7d170345dbbe 100644 --- a/pkgs/development/python-modules/magic-wormhole/default.nix +++ b/pkgs/development/python-modules/magic-wormhole/default.nix @@ -2,41 +2,49 @@ , buildPythonPackage , fetchPypi , pythonAtLeast -, nettools -, glibcLocales -, autobahn -, cffi -, click -, hkdf -, pynacl -, spake2 -, tqdm , python -, mock -, ipaddress +, spake2 +, pynacl +, six +, attrs +, twisted +, autobahn +, automat +, hkdf +, tqdm +, click , humanize -, pyopenssl -, service-identity +, ipaddress , txtorcon +, nettools +, glibc +, glibcLocales +, mock +, magic-wormhole-transit-relay }: buildPythonPackage rec { pname = "magic-wormhole"; - version = "0.10.4"; - name = "${pname}-${version}"; + version = "0.10.5"; src = fetchPypi { inherit pname version; - sha256 = "cd3105975e71bc6437848c7fc9f0b23ef0e0c625c8b19ec66a5ddc727c6d11ae"; + sha256 = "9558ea1f3551e535deec3462cd5c8391cb32ebb12ecd8b40b36861dbee4917ee"; }; - checkInputs = [ mock ]; + checkInputs = [ mock magic-wormhole-transit-relay ]; buildInputs = [ nettools glibcLocales ]; - propagatedBuildInputs = [ autobahn cffi click hkdf pynacl spake2 tqdm ipaddress humanize pyopenssl service-identity txtorcon ]; + propagatedBuildInputs = [ spake2 pynacl six attrs twisted autobahn automat hkdf tqdm click humanize ipaddress txtorcon ]; postPatch = '' sed -i -e "s|'ifconfig'|'${nettools}/bin/ifconfig'|" src/wormhole/ipaddrs.py sed -i -e "s|if (os.path.dirname(os.path.abspath(wormhole))|if not os.path.abspath(wormhole).startswith('/nix/store') and (os.path.dirname(os.path.abspath(wormhole))|" src/wormhole/test/test_cli.py + + # magic-wormhole will attempt to find all available locales by running + # 'locale -a'. If we're building on Linux, then this may result in us + # running the system's locale binary instead of the one from Nix, so let's + # ensure we patch this. + sed -i -e 's|getProcessOutputAndValue("locale"|getProcessOutputAndValue("${glibc}/bin/locale"|' src/wormhole/test/test_cli.py '' + lib.optionalString (pythonAtLeast "3.3") '' sed -i -e 's|"ipaddress",||' setup.py ''; diff --git a/pkgs/development/python-modules/mysql-connector/default.nix b/pkgs/development/python-modules/mysql-connector/default.nix new file mode 100644 index 000000000000..6a2b3de00165 --- /dev/null +++ b/pkgs/development/python-modules/mysql-connector/default.nix @@ -0,0 +1,30 @@ +{ lib, buildPythonPackage, fetchFromGitHub +, protobuf +}: + +buildPythonPackage rec { + pname = "mysql-connector"; + version = "8.0.6"; + + src = fetchFromGitHub { + owner = "mysql"; + repo = "mysql-connector-python"; + rev = version; + sha256 = "1ygr7va56da12yp3gr7kzss9zgbs28q2lmdkw16rpxj108id4rkp"; + }; + + propagatedBuildInputs = [ protobuf ]; + + doCheck = false; + + meta = { + description = "A MySQL driver"; + longDescription = '' + A MySQL driver that does not depend on MySQL C client libraries and + implements the DB API v2.0 specification. + ''; + homepage = https://github.com/mysql/mysql-connector-python; + license = [ lib.licenses.gpl2 ]; + maintainers = with lib.maintainers; [ primeos ]; + }; +} diff --git a/pkgs/development/python-modules/natsort/default.nix b/pkgs/development/python-modules/natsort/default.nix index 8e81f923b916..a5940ed6c9f6 100644 --- a/pkgs/development/python-modules/natsort/default.nix +++ b/pkgs/development/python-modules/natsort/default.nix @@ -16,9 +16,8 @@ }: buildPythonPackage rec { - name = "${pname}-${version}"; pname = "natsort"; - version = "5.1.1"; + version = "5.2.0"; buildInputs = [ hypothesis @@ -36,11 +35,9 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "9ffbfb74bf3fc3905be1b9b052ed865675651e38fcd972ed1ed5c64a02f93cbd"; + sha256 = "c960082d2145b04723041c4b85092546560538e29664dd197a1344d5b090bc91"; }; - patches = lib.optional (isPy35 || isPy36) ./python-3.6.3-test-failures.patch; - # testing based on project's tox.ini checkPhase = '' pytest --doctest-modules natsort diff --git a/pkgs/development/python-modules/natsort/python-3.6.3-test-failures.patch b/pkgs/development/python-modules/natsort/python-3.6.3-test-failures.patch deleted file mode 100644 index b304a1d11e52..000000000000 --- a/pkgs/development/python-modules/natsort/python-3.6.3-test-failures.patch +++ /dev/null @@ -1,37 +0,0 @@ -diff --git a/test_natsort/test_string_component_transform_factory.py b/test_natsort/test_string_component_transform_factory.py -index 6790e51..8db4efb 100644 ---- a/test_natsort/test_string_component_transform_factory.py -+++ b/test_natsort/test_string_component_transform_factory.py -@@ -24,6 +24,8 @@ from hypothesis.strategies import ( - ) - from compat.locale import bad_uni_chars - -+import pytest -+ - - # Each test has an "example" version for demonstrative purposes, - # and a test that uses the hypothesis module. -@@ -77,6 +79,7 @@ def test_string_component_transform_factory_with_LOCALE_returns_fast_int_and_gro - assert _string_component_transform_factory(ns.LOCALE)(x) == fast_int(x, key=get_strxfrm()) - - -+@pytest.mark.xfail - @given(text()) - def test_string_component_transform_factory_with_LOCALE_returns_fast_int_and_groupletters(x): - assume(x) -@@ -89,6 +92,7 @@ def test_string_component_transform_factory_with_LOCALE_and_GROUPLETTERS_returns - assert _string_component_transform_factory(ns.GROUPLETTERS | ns.LOCALE)(x) == fast_int(x, key=lambda x: get_strxfrm()(_groupletters(x))) - - -+@pytest.mark.xfail - @given(text()) - def test_string_component_transform_factory_with_LOCALE_and_GROUPLETTERS_returns_fast_int_and_groupletters_and_locale_convert(x): - assume(x) -@@ -104,6 +108,7 @@ def test_string_component_transform_factory_with_LOCALE_and_DUMB_returns_fast_in - assert _string_component_transform_factory(ns._DUMB | ns.LOCALE)(x) == fast_int(x, key=lambda x: get_strxfrm()(_groupletters(x))) - - -+@pytest.mark.xfail - @given(text()) - def test_string_component_transform_factory_with_LOCALE_and_DUMB_returns_fast_int_and_groupletters_and_locale_convert(x): - assume(x) diff --git a/pkgs/development/python-modules/numpy/default.nix b/pkgs/development/python-modules/numpy/default.nix index 2d575d8742aa..f32f417c3917 100644 --- a/pkgs/development/python-modules/numpy/default.nix +++ b/pkgs/development/python-modules/numpy/default.nix @@ -2,13 +2,13 @@ buildPythonPackage rec { pname = "numpy"; - version = "1.13.3"; + version = "1.14.0"; name = "${pname}-${version}"; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "36ee86d5adbabc4fa2643a073f93d5504bdfed37a149a3a49f4dde259f35a750"; + sha256 = "3de643935b212307b420248018323a44ec51987a336d1d747c1322afc3c099fb"; }; disabled = isPyPy; diff --git a/pkgs/development/python-modules/numpydoc/default.nix b/pkgs/development/python-modules/numpydoc/default.nix new file mode 100644 index 000000000000..3af324c87652 --- /dev/null +++ b/pkgs/development/python-modules/numpydoc/default.nix @@ -0,0 +1,27 @@ +{ lib +, buildPythonPackage +, fetchPypi +, nose +, sphinx +, jinja2 +}: + +buildPythonPackage rec { + pname = "numpydoc"; + version = "0.7.0"; + + src = fetchPypi { + inherit pname; + inherit version; + sha256 = "2dc7b2c4e3914745e38e370946fa4c109817331e6d450806285c08bce5cd575a"; + }; + + checkInputs = [ nose ]; + propagatedBuildInputs = [ sphinx jinja2 ]; + + meta = { + description = "Sphinx extension to support docstrings in Numpy format"; + homepage = "https://github.com/numpy/numpydoc"; + license = lib.licenses.free; + }; +} \ No newline at end of file diff --git a/pkgs/development/python-modules/oauthenticator/default.nix b/pkgs/development/python-modules/oauthenticator/default.nix index ecb21404a085..362554b9bb89 100644 --- a/pkgs/development/python-modules/oauthenticator/default.nix +++ b/pkgs/development/python-modules/oauthenticator/default.nix @@ -16,11 +16,11 @@ buildPythonPackage rec { pname = "oauthenticator"; - version = "0.7.2"; + version = "0.7.3"; src = fetchPypi { inherit pname version; - sha256 = "0rlg63ii7sxj1xad2nx6wk1xgv3a8dm0az0q9g2v6hdv9cnc4b55"; + sha256 = "cb0b2564e46db28350693bc3e6457333c4ee21af5066ac743730e3f3173ea7ed"; }; checkPhase = '' diff --git a/pkgs/development/python-modules/onkyo-eiscp/default.nix b/pkgs/development/python-modules/onkyo-eiscp/default.nix new file mode 100644 index 000000000000..c0a1e39b384b --- /dev/null +++ b/pkgs/development/python-modules/onkyo-eiscp/default.nix @@ -0,0 +1,22 @@ +{ stdenv, buildPythonPackage, fetchPypi +, docopt, netifaces }: + +buildPythonPackage rec { + pname = "onkyo-eiscp"; + version = "1.2.4"; + name = "${pname}-${version}"; + + src = fetchPypi { + inherit pname version; + sha256 = "0qb5w2g2cnckq7psh92g1w3gf76437x1vwfhwnd247wshs5h7hxj"; + }; + + propagatedBuildInputs = [ docopt netifaces ]; + + meta = with stdenv.lib; { + description = "Control Onkyo receivers over ethernet"; + homepage = https://github.com/miracle2k/onkyo-eiscp; + license = licenses.mit; + maintainers = with maintainers; [ peterhoeg ]; + }; +} diff --git a/pkgs/development/python-modules/packaging/default.nix b/pkgs/development/python-modules/packaging/default.nix index 4ba93bb57f20..f335bfa135f9 100644 --- a/pkgs/development/python-modules/packaging/default.nix +++ b/pkgs/development/python-modules/packaging/default.nix @@ -4,7 +4,6 @@ buildPythonPackage rec { pname = "packaging"; version = "16.8"; - name = "${pname}-${version}"; src = fetchPypi { inherit pname version; @@ -13,7 +12,11 @@ buildPythonPackage rec { propagatedBuildInputs = [ pyparsing six ]; - buildInputs = [ pytest pretend ]; + checkInputs = [ pytest pretend ]; + + checkPhase = '' + py.test tests + ''; meta = with stdenv.lib; { description = "Core utilities for Python packages"; diff --git a/pkgs/development/python-modules/pafy/default.nix b/pkgs/development/python-modules/pafy/default.nix index 77ed1d6c4c0a..a1b5c77b2d10 100644 --- a/pkgs/development/python-modules/pafy/default.nix +++ b/pkgs/development/python-modules/pafy/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { name = "${pname}-${version}"; pname = "pafy"; - version = "0.5.3.1"; + version = "0.5.4"; src = fetchPypi { inherit pname version; - sha256 = "1a7dxi95m1043rxx1r5x3ngb66nwlq6aqcasyqqjzmmmjps4zrim"; + sha256 = "e842dc589a339a870b5869cc3802f2e95824edf347f65128223cd5ebdff21024"; }; # No tests included in archive diff --git a/pkgs/development/python-modules/path.py/default.nix b/pkgs/development/python-modules/path.py/default.nix index 2830477d3cf1..53754fd3dc29 100644 --- a/pkgs/development/python-modules/path.py/default.nix +++ b/pkgs/development/python-modules/path.py/default.nix @@ -5,20 +5,21 @@ , pytestrunner , pytest , glibcLocales +, packaging }: buildPythonPackage rec { pname = "path.py"; - version = "10.5"; + version = "11.0"; name = pname + "-" + version; src = fetchPypi { inherit pname version; - sha256 = "63a7af08676668fd51750f111affbd38c1a13c61aba15c6665b16681771c79a8"; + sha256 = "16134e5b287aba4a4125a6722e7837cf2a149fccc5000c500ae6c71a5525488b"; }; - checkInputs = [ pytest pytestrunner ]; - buildInputs = [setuptools_scm glibcLocales ]; + checkInputs = [ pytest pytestrunner glibcLocales packaging ]; + buildInputs = [ setuptools_scm ]; LC_ALL="en_US.UTF-8"; diff --git a/pkgs/development/python-modules/pathlib2/default.nix b/pkgs/development/python-modules/pathlib2/default.nix index 18c083298e68..09d759c97ee3 100644 --- a/pkgs/development/python-modules/pathlib2/default.nix +++ b/pkgs/development/python-modules/pathlib2/default.nix @@ -22,6 +22,7 @@ if !(pythonOlder "3.4") then null else buildPythonPackage rec { preCheck = '' export LC_ALL="en_US.UTF-8" + sed -i test_pathlib2.py -e "s@hasattr(pwd, 'getpwall')@False@" ''; meta = { @@ -29,4 +30,4 @@ if !(pythonOlder "3.4") then null else buildPythonPackage rec { homepage = https://pypi.python.org/pypi/pathlib2/; license = with lib.licenses; [ mit ]; }; -} \ No newline at end of file +} diff --git a/pkgs/development/python-modules/pendulum/default.nix b/pkgs/development/python-modules/pendulum/default.nix index aa8e2d22b43e..12d5c82d511a 100644 --- a/pkgs/development/python-modules/pendulum/default.nix +++ b/pkgs/development/python-modules/pendulum/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "pendulum"; - version = "1.4.0"; + version = "1.4.1"; src = fetchPypi { inherit pname version; - sha256 = "e996c34fb101c9c6d88a839c19af74d7c067b92ed3371274efcf4d4b6dc160a6"; + sha256 = "3f16fb759e6126dd89d49886f8100caa72e5ab36563bc148b4f7eddfa0099c0f"; }; propagatedBuildInputs = [ dateutil pytzdata tzlocal ]; diff --git a/pkgs/development/python-modules/pexpect/default.nix b/pkgs/development/python-modules/pexpect/default.nix index da8d5db359b0..b064b9037e90 100644 --- a/pkgs/development/python-modules/pexpect/default.nix +++ b/pkgs/development/python-modules/pexpect/default.nix @@ -6,12 +6,12 @@ buildPythonPackage rec { pname = "pexpect"; - version = "4.3.1"; + version = "4.4.0"; name = "${pname}-${version}"; src = fetchPypi { inherit pname version; - sha256 = "8e287b171dbaf249d0b06b5f2e88cb7e694651d2d0b8c15bccb83170d3c55575"; + sha256 = "67b85a1565968e3d5b5e7c9283caddc90c3947a2625bed1905be27bd5a03e47d"; }; # Wants to run pythonin a subprocess diff --git a/pkgs/development/python-modules/plone-testing/default.nix b/pkgs/development/python-modules/plone-testing/default.nix index 910fc034e365..6f18a74f0738 100644 --- a/pkgs/development/python-modules/plone-testing/default.nix +++ b/pkgs/development/python-modules/plone-testing/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "plone.testing"; - version = "5.1.1"; + version = "6.0.0"; src = fetchPypi { inherit pname version; - sha256 = "2ca558a910b93355b760535b233518be3a06c58e46160487bf802b6f7cb1e511"; + sha256 = "8aa7c45237b883ea1d1c28fb465322f69310b084b9f9b6a79af64401b649dc4c"; }; propagatedBuildInputs = [ setuptools zope_testing ]; diff --git a/pkgs/development/python-modules/plotly/default.nix b/pkgs/development/python-modules/plotly/default.nix index bddff8e95f44..a202ef8b85a5 100644 --- a/pkgs/development/python-modules/plotly/default.nix +++ b/pkgs/development/python-modules/plotly/default.nix @@ -10,12 +10,12 @@ buildPythonPackage rec { pname = "plotly"; - version = "2.3.0"; + version = "2.4.0"; name = "${pname}-${version}"; src = fetchPypi { inherit pname version; - sha256 = "95e72273699108f215886ab961dbf0890904d39583be39eabcd0788bc7ccf695"; + sha256 = "8e7ee039231fec52b0b38d45e7470f70b117f6527b08cc922d74992f4d082858"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/plumbum/default.nix b/pkgs/development/python-modules/plumbum/default.nix index a5881bb2e7cf..cd4a79104eb8 100644 --- a/pkgs/development/python-modules/plumbum/default.nix +++ b/pkgs/development/python-modules/plumbum/default.nix @@ -6,7 +6,7 @@ buildPythonPackage rec { pname = "plumbum"; - version = "1.6.5"; + version = "1.6.6"; name = "${pname}-${version}"; checkInputs = [ pytest ]; @@ -16,6 +16,6 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "d8abb059bb62beb6c99db08d3598167abaeeab53eaf218f91e74bae471a24bee"; + sha256 = "d179b90a9927f91427a28c1bac2864c61342cb43ef39aa7324c7c9a96bcc23eb"; }; } \ No newline at end of file diff --git a/pkgs/development/python-modules/plyfile/default.nix b/pkgs/development/python-modules/plyfile/default.nix index 410a633c46b0..bfe5d2f202df 100644 --- a/pkgs/development/python-modules/plyfile/default.nix +++ b/pkgs/development/python-modules/plyfile/default.nix @@ -15,7 +15,7 @@ buildPythonPackage rec { meta = with lib; { description = "NumPy-based text/binary PLY file reader/writer for Python"; - homepage = "https://github.com/dranjan/python-plyfile"; + homepage = https://github.com/dranjan/python-plyfile; maintainers = with maintainers; [ abbradar ]; }; diff --git a/pkgs/development/python-modules/prov/default.nix b/pkgs/development/python-modules/prov/default.nix index 9dac8677c33b..8866382ea8f2 100644 --- a/pkgs/development/python-modules/prov/default.nix +++ b/pkgs/development/python-modules/prov/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "prov"; - version = "1.5.1"; + version = "1.5.2"; src = fetchPypi { inherit pname version; - sha256 = "7a2d72b0df43cd9c6e374d815c8ce3cd5ca371d54f98f837853ac9fcc98aee4c"; + sha256 = "640dc158d931403bc6c1a0ad80702caae71f810bac21f90ec605865c8444b7bb"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/pwntools/default.nix b/pkgs/development/python-modules/pwntools/default.nix index 0ed51d7acecf..da7ddbc7dcb7 100644 --- a/pkgs/development/python-modules/pwntools/default.nix +++ b/pkgs/development/python-modules/pwntools/default.nix @@ -5,12 +5,12 @@ , requests, tox, unicorn, intervaltree, fetchpatch }: buildPythonPackage rec { - version = "3.11.0"; + version = "3.12.0"; pname = "pwntools"; src = fetchPypi { inherit pname version; - sha256 = "609b3f0ba47c975f4dbedd3da2af4c5ca1b3a2aa13fb99240531b6a68edb87be"; + sha256 = "09a7yhsyqxb4xf2r6mbn3p5zx1wp89lxq7lj34y4zbin6ns5929s"; }; propagatedBuildInputs = [ Mako packaging pysocks pygments ROPGadget capstone paramiko pip psutil pyelftools pyserial dateutil requests tox unicorn intervaltree ]; @@ -18,10 +18,10 @@ buildPythonPackage rec { disabled = isPy3k; doCheck = false; # no setuptools tests for the package - # Can be removed when 3.12.0 is released + # Can be removed when 3.13.0 is released patches = [ (fetchpatch { - url = "https://github.com/Gallopsled/pwntools/pull/1098.patch"; + url = "https://github.com/Gallopsled/pwntools/commit/9859f54a21404174dd17efee02f91521a2dd09c5.patch"; sha256 = "0p0h87npn1mwsd8ciab7lg74bk3ahlk5r0mjbvx4jhihl2gjc3z2"; }) ]; diff --git a/pkgs/development/python-modules/py_scrypt/default.nix b/pkgs/development/python-modules/py_scrypt/default.nix index bf6300b84119..1b1f758d9413 100644 --- a/pkgs/development/python-modules/py_scrypt/default.nix +++ b/pkgs/development/python-modules/py_scrypt/default.nix @@ -6,12 +6,12 @@ buildPythonPackage rec { pname = "scrypt"; - version = "0.8.0"; + version = "0.8.6"; name = "${pname}-${version}"; src = fetchPypi { inherit pname version; - sha256 = "0830r3q8f8mc4738ngcvwhv9kih5c6zf87mzkdifzf2h6kss99fl"; + sha256 = "f8239b2d47fa1d40bc27efd231dc7083695d10c1c2ac51a99380360741e0362d"; }; buildInputs = [ openssl ]; diff --git a/pkgs/development/python-modules/py_stringmatching/default.nix b/pkgs/development/python-modules/py_stringmatching/default.nix new file mode 100644 index 000000000000..3931078c12ed --- /dev/null +++ b/pkgs/development/python-modules/py_stringmatching/default.nix @@ -0,0 +1,28 @@ +{ lib +, buildPythonPackage +, numpy +, six +, nose +, fetchPypi +}: + +buildPythonPackage rec { + pname = "py_stringmatching"; + version = "0.4.0"; + + src = fetchPypi { + inherit pname version; + sha256 = "0rjsx7iipn6svki21lmsza7b0dz9vkgmix696zryiv7gkhblqyb4"; + }; + + checkInputs = [ nose ]; + + propagatedBuildInputs = [ numpy six ]; + + meta = with lib; { + description = "A Python string matching library including string tokenizers and string similarity measures"; + homepage = https://sites.google.com/site/anhaidgroup/projects/magellan/py_stringmatching; + license = licenses.bsd3; + maintainers = with maintainers; [ ixxie ]; + }; +} diff --git a/pkgs/development/python-modules/pyatspi/default.nix b/pkgs/development/python-modules/pyatspi/default.nix index d96a4c8cea32..6192f94445f3 100644 --- a/pkgs/development/python-modules/pyatspi/default.nix +++ b/pkgs/development/python-modules/pyatspi/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, at_spi2_core, pythonPackages }: +{ stdenv, fetchurl, pkgconfig, at-spi2-core, pythonPackages }: stdenv.mkDerivation rec { pname = "pyatspi"; @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { broken = true; buildInputs = [ - at_spi2_core + at-spi2-core pkgconfig pythonPackages.python pythonPackages.pygobject3 diff --git a/pkgs/development/python-modules/pychromecast/default.nix b/pkgs/development/python-modules/pychromecast/default.nix index 46d3272807eb..0b41b6ef0b10 100644 --- a/pkgs/development/python-modules/pychromecast/default.nix +++ b/pkgs/development/python-modules/pychromecast/default.nix @@ -2,19 +2,19 @@ buildPythonPackage rec { pname = "PyChromecast"; - version = "1.0.3"; + version = "2.0.0"; name = pname + "-" + version; src = fetchurl { url = "mirror://pypi/p/pychromecast/${name}.tar.gz"; - sha256 = "714a9e03e6a258081e3b6296ed15592e015facbe38bbe60819cca6f04c599f25"; + sha256 = "1cp1ssfb8zk4sz74nsnf72b7dd5fzkwc4qdgc7rq8nfr4v611w6c"; }; propagatedBuildInputs = [ requests six zeroconf protobuf ]; meta = with lib; { description = "Library for Python 2 and 3 to communicate with the Google Chromecast"; - homepage = "https://github.com/balloob/pychromecast"; + homepage = https://github.com/balloob/pychromecast; license = licenses.mit; maintainers = with maintainers; [ abbradar ]; platforms = platforms.linux; diff --git a/pkgs/development/python-modules/pyglet/default.nix b/pkgs/development/python-modules/pyglet/default.nix index 51243154b1a2..8ac066500a4c 100644 --- a/pkgs/development/python-modules/pyglet/default.nix +++ b/pkgs/development/python-modules/pyglet/default.nix @@ -2,12 +2,12 @@ , mesa, xorg, freetype, fontconfig, future}: buildPythonPackage rec { - version = "1.3.0"; + version = "1.3.1"; pname = "pyglet"; src = fetchPypi { inherit pname version; - sha256 = "640a8f8e3d7bf8dbb551fa707f14021f619932990ab1401c48ba9dbcc6c2242c"; + sha256 = "0a73280fa3949ea4890fee28f625c10b1e10a7cda390a08b6bce4740948167cd"; }; postPatch = let diff --git a/pkgs/development/python-modules/pykde4/kdelibs.nix b/pkgs/development/python-modules/pykde4/kdelibs.nix index dbf36d0eac8b..c5e148d1500a 100644 --- a/pkgs/development/python-modules/pykde4/kdelibs.nix +++ b/pkgs/development/python-modules/pykde4/kdelibs.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, - automoc4, cmake_2_8, libxslt, perl, pkgconfig, shared_mime_info, + automoc4, cmake_2_8, libxslt, perl, pkgconfig, shared-mime-info, attica, docbook_xml_dtd_42, docbook_xsl, giflib, libdbusmenu_qt, libjpeg, phonon, qt4 }: @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { enableParallelBuilding = true; nativeBuildInputs = [ - automoc4 cmake_2_8 libxslt perl pkgconfig shared_mime_info + automoc4 cmake_2_8 libxslt perl pkgconfig shared-mime-info ]; buildInputs = [ attica giflib libdbusmenu_qt libjpeg diff --git a/pkgs/development/python-modules/pylru/default.nix b/pkgs/development/python-modules/pylru/default.nix new file mode 100644 index 000000000000..db8584c4f9e5 --- /dev/null +++ b/pkgs/development/python-modules/pylru/default.nix @@ -0,0 +1,18 @@ +{ lib, buildPythonPackage, fetchurl }: + +buildPythonPackage rec { + name = "pylru-${version}"; + version = "1.0.9"; + + src = fetchurl { + url = "mirror://pypi/p/pylru/${name}.tar.gz"; + sha256 = "0b0pq0l7xv83dfsajsc49jcxzc99kb9jfx1a1dlx22hzcy962dvi"; + }; + + meta = with lib; { + homepage = https://github.com/jlhutch/pylru; + description = "A least recently used (LRU) cache implementation"; + license = licenses.gpl2; + maintainers = with maintainers; [ abbradar ]; + }; +} diff --git a/pkgs/development/python-modules/pyspf/default.nix b/pkgs/development/python-modules/pyspf/default.nix new file mode 100644 index 000000000000..6903b6c7a0c0 --- /dev/null +++ b/pkgs/development/python-modules/pyspf/default.nix @@ -0,0 +1,20 @@ +{ lib, buildPythonPackage, fetchurl, pydns }: + +buildPythonPackage rec { + name = "pyspf-${version}"; + version = "2.0.12"; + + src = fetchurl { + url = "mirror://sourceforge/pymilter/pyspf/${name}/${name}.tar.gz"; + sha256 = "18j1rmbmhih7q6y12grcj169q7sx1986qn4gmpla9y5gwfh1p8la"; + }; + + propagatedBuildInputs = [ pydns ]; + + meta = with lib; { + homepage = http://bmsi.com/python/milter.html; + description = "Python API for Sendmail Milters (SPF)"; + maintainers = with maintainers; [ abbradar ]; + license = licenses.gpl2; + }; +} diff --git a/pkgs/development/python-modules/pytest-mock/default.nix b/pkgs/development/python-modules/pytest-mock/default.nix index 7cb5224c60b6..51ec2a1f4cbc 100644 --- a/pkgs/development/python-modules/pytest-mock/default.nix +++ b/pkgs/development/python-modules/pytest-mock/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "pytest-mock"; - version = "1.6.3"; + version = "1.7.0"; src = fetchPypi { inherit pname version; - sha256 = "920d1167af5c2c2ad3fa0717d0c6c52e97e97810160c15721ac895cac53abb1c"; + sha256 = "8ed6c9ac6b7565b226b4da2da48876c9198d76401ec8d9c5e4c69b45423e33f8"; }; propagatedBuildInputs = [ pytest ] ++ lib.optional (!isPy3k) mock; diff --git a/pkgs/development/python-modules/pytestrunner/default.nix b/pkgs/development/python-modules/pytestrunner/default.nix index 67af195b68a6..4f15adcd90e5 100644 --- a/pkgs/development/python-modules/pytestrunner/default.nix +++ b/pkgs/development/python-modules/pytestrunner/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "pytest-runner"; - version = "3.0"; + version = "4.0"; src = fetchPypi { inherit pname version; - sha256 = "00v7pi09q60yx0l1kzyklnmr5bp597mir85a9gsi7bdfyly3lz0g"; + sha256 = "183f3745561b1e00ea51cd97634ba5c540848ab4aa8016a81faba7fb7f33ec76"; }; buildInputs = [ setuptools_scm pytest ]; diff --git a/pkgs/development/python-modules/python-axolotl-curve25519/default.nix b/pkgs/development/python-modules/python-axolotl-curve25519/default.nix new file mode 100644 index 000000000000..d90b7fa740dc --- /dev/null +++ b/pkgs/development/python-modules/python-axolotl-curve25519/default.nix @@ -0,0 +1,18 @@ +{ lib, buildPythonPackage, fetchurl }: + +buildPythonPackage rec { + name = "python-axolotl-curve25519-${version}"; + version = "0.1"; + + src = fetchurl { + url = "mirror://pypi/p/python-axolotl-curve25519/${name}.tar.gz"; + sha256 = "1h1rsdr7m8lvgxwrwng7qv0xxmyc9k0q7g9nbcr6ks2ipyjzcnf5"; + }; + + meta = with lib; { + homepage = https://github.com/tgalal/python-axolotl-curve25519; + description = "Curve25519 with ed25519 signatures"; + maintainers = with maintainers; [ abbradar ]; + license = licenses.gpl3; + }; +} diff --git a/pkgs/development/python-modules/python-axolotl/default.nix b/pkgs/development/python-modules/python-axolotl/default.nix new file mode 100644 index 000000000000..71c456875bcf --- /dev/null +++ b/pkgs/development/python-modules/python-axolotl/default.nix @@ -0,0 +1,22 @@ +{ lib, buildPythonPackage, fetchurl, python-axolotl-curve25519, protobuf, pycrypto }: + +buildPythonPackage rec { + name = "python-axolotl-${version}"; + version = "0.1.39"; + + src = fetchurl { + url = "mirror://pypi/p/python-axolotl/${name}.tar.gz"; + sha256 = "09bf5gfip9x2wr0ij43p39ac6z2iqzn7kgpi2jjbwpnhs0vwkycs"; + }; + + propagatedBuildInputs = [ python-axolotl-curve25519 protobuf pycrypto ]; + # IV == 0 in tests is not supported by pycryptodome (our pycrypto drop-in) + doCheck = false; + + meta = with lib; { + homepage = https://github.com/tgalal/python-axolotl; + description = "Python port of libaxolotl-android"; + maintainers = with maintainers; [ abbradar ]; + license = licenses.gpl3; + }; +} diff --git a/pkgs/development/python-modules/python-magic/default.nix b/pkgs/development/python-modules/python-magic/default.nix index 56be2e3448ae..d48a6288a7dd 100644 --- a/pkgs/development/python-modules/python-magic/default.nix +++ b/pkgs/development/python-modules/python-magic/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "python-magic"; - version = "0.4.13"; + version = "0.4.15"; src = fetchPypi { inherit pname version; - sha256 = "128j9y30zih6cyjyjnxhghnvpjm8vw40a1q7pgmrp035yvkaqkk0"; + sha256 = "f3765c0f582d2dfc72c15f3b5a82aecfae9498bd29ca840d72f37d7bd38bfcd5"; }; postPatch = '' diff --git a/pkgs/development/python-modules/pythonix/default.nix b/pkgs/development/python-modules/pythonix/default.nix index dacc27c53a05..6248ed7bf66a 100644 --- a/pkgs/development/python-modules/pythonix/default.nix +++ b/pkgs/development/python-modules/pythonix/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, ninja, meson, pkgconfig, gcc7, nixUnstable, isPy3k }: +{ stdenv, fetchFromGitHub, ninja, meson, pkgconfig, nixUnstable, isPy3k }: assert isPy3k; @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { sha256 = "1piblysypyr442a6najk4mdh87xc377i2fdbfw6fr569z60mnnnj"; }; - nativeBuildInputs = [ meson pkgconfig ninja gcc7 ]; + nativeBuildInputs = [ meson pkgconfig ninja ]; buildInputs = [ nixUnstable ]; diff --git a/pkgs/development/python-modules/pyunifi/default.nix b/pkgs/development/python-modules/pyunifi/default.nix new file mode 100644 index 000000000000..31ec613df4c8 --- /dev/null +++ b/pkgs/development/python-modules/pyunifi/default.nix @@ -0,0 +1,21 @@ +{ stdenv, buildPythonPackage, fetchPypi +, requests }: + +buildPythonPackage rec { + pname = "pyunifi"; + version = "2.13"; + + src = fetchPypi { + inherit pname version; + sha256 = "1dhbfzv5a29v763m0b9wsc4pvkdr979w7g4rz7ak8hsi4sx6b9dq"; + }; + + propagatedBuildInputs = [ requests ]; + + meta = with stdenv.lib; { + description = "API towards Ubiquity Networks UniFi controller"; + homepage = https://github.com/finish06/unifi-api; + license = licenses.mit; + maintainers = with maintainers; [ peterhoeg ]; + }; +} diff --git a/pkgs/development/python-modules/raven/default.nix b/pkgs/development/python-modules/raven/default.nix index b6cc70ed787c..33d199ad274a 100644 --- a/pkgs/development/python-modules/raven/default.nix +++ b/pkgs/development/python-modules/raven/default.nix @@ -1,12 +1,16 @@ -{ lib, buildPythonPackage, fetchPypi, isPy3k, contextlib2, blinker }: +{ lib, buildPythonPackage, fetchFromGitHub, isPy3k +, contextlib2, blinker +}: buildPythonPackage rec { pname = "raven"; - version = "6.5.0"; + version = "6.6.0"; - src = fetchPypi { - inherit pname version; - sha256 = "84da75114739191bdf2388f296ffd6177e83567a7fbaf2701e034ad6026e4f3b"; + src = fetchFromGitHub { + owner = "getsentry"; + repo = "raven-python"; + rev = version; + sha256 = "184wpr0zdcm260pxqll9kpmp2ywisn75k8pdm8gc6xmk740in1hj"; }; # way too many dependencies to run tests diff --git a/pkgs/development/python-modules/regex/default.nix b/pkgs/development/python-modules/regex/default.nix index c6279f5e7c41..44650618f5f5 100644 --- a/pkgs/development/python-modules/regex/default.nix +++ b/pkgs/development/python-modules/regex/default.nix @@ -6,18 +6,18 @@ buildPythonPackage rec { pname = "regex"; - version = "2018.01.10"; + version = "2018.02.08"; src = fetchPypi { inherit pname version; - sha256 = "139678fc013b75e486e580c39b4c52d085ed7362e400960f8be1711a414f16b5"; + sha256 = "2353c0e983c4029caf32016f1dddef623c3117ac282a818468c6d2f5d541698d"; }; meta = { description = "Alternative regular expression module, to replace re"; - homepage = "https://bitbucket.org/mrabarnett/mrab-regex"; + homepage = https://bitbucket.org/mrabarnett/mrab-regex; license = lib.licenses.psfl; platforms = lib.platforms.linux; maintainers = with lib.maintainers; [ abbradar ]; }; -} \ No newline at end of file +} diff --git a/pkgs/development/python-modules/requests/default.nix b/pkgs/development/python-modules/requests/default.nix index f3ff4a84f1e8..aeca2abf17cf 100644 --- a/pkgs/development/python-modules/requests/default.nix +++ b/pkgs/development/python-modules/requests/default.nix @@ -3,7 +3,6 @@ , pytest }: buildPythonPackage rec { - name = "${pname}-${version}"; pname = "requests"; version = "2.18.4"; diff --git a/pkgs/development/python-modules/ropper/default.nix b/pkgs/development/python-modules/ropper/default.nix index b35145872dd1..82b809a1e917 100644 --- a/pkgs/development/python-modules/ropper/default.nix +++ b/pkgs/development/python-modules/ropper/default.nix @@ -8,11 +8,11 @@ buildPythonApplication rec { pname = "ropper"; - version = "1.11.3"; + version = "1.11.6"; src = fetchPypi { inherit pname version; - sha256 = "77d9b03083d0a098261a1d2856cd330ea3db520511a78472e421a00526aa220c"; + sha256 = "33777d0c3ddd9ca7bc48f53dbe2c4a222a567f1125c43b1c34fb1b360d0b19dc"; }; # XXX tests rely on user-writeable /dev/shm to obtain process locks and return PermissionError otherwise # workaround: sudo chmod 777 /dev/shm diff --git a/pkgs/development/python-modules/s3transfer/default.nix b/pkgs/development/python-modules/s3transfer/default.nix index 3311af5e8869..9b74b9c8ba35 100644 --- a/pkgs/development/python-modules/s3transfer/default.nix +++ b/pkgs/development/python-modules/s3transfer/default.nix @@ -14,11 +14,11 @@ buildPythonPackage rec { pname = "s3transfer"; - version = "0.1.12"; + version = "0.1.13"; src = fetchPypi { inherit pname version; - sha256 = "07hjj1cy62sc3rh5lhna9mhylp7h7aak4v6mf6809q4nc8j1p28h"; + sha256 = "90dc18e028989c609146e241ea153250be451e05ecc0c2832565231dacdf59c1"; }; foo = 1; diff --git a/pkgs/development/python-modules/sarge/default.nix b/pkgs/development/python-modules/sarge/default.nix new file mode 100644 index 000000000000..340c8d002b72 --- /dev/null +++ b/pkgs/development/python-modules/sarge/default.nix @@ -0,0 +1,18 @@ +{ lib, buildPythonPackage, fetchurl }: + +buildPythonPackage rec { + name = "sarge-${version}"; + version = "0.1.4"; + + src = fetchurl { + url = "mirror://pypi/s/sarge/${name}.tar.gz"; + sha256 = "08s8896973bz1gg0pkr592w6g4p6v47bkfvws5i91p9xf8b35yar"; + }; + + meta = with lib; { + homepage = http://sarge.readthedocs.org/; + description = "A wrapper for subprocess which provides command pipeline functionality"; + license = licenses.bsd3; + maintainers = with maintainers; [ abbradar ]; + }; +} diff --git a/pkgs/development/python-modules/scandir/default.nix b/pkgs/development/python-modules/scandir/default.nix new file mode 100644 index 000000000000..521f68db1cc6 --- /dev/null +++ b/pkgs/development/python-modules/scandir/default.nix @@ -0,0 +1,18 @@ +{ lib, buildPythonPackage, fetchurl }: + +buildPythonPackage rec { + name = "scandir-${version}"; + version = "1.7"; + + src = fetchurl { + url = "mirror://pypi/s/scandir/${name}.tar.gz"; + sha256 ="0gbnhjzg42rj87ljv9kb648rfxph69ly3c8r9841dxy4d7l5pmdj"; + }; + + meta = with lib; { + description = "A better directory iterator and faster os.walk()"; + homepage = https://github.com/benhoyt/scandir; + license = licenses.gpl3; + maintainers = with maintainers; [ abbradar ]; + }; +} diff --git a/pkgs/development/python-modules/semantic-version/default.nix b/pkgs/development/python-modules/semantic-version/default.nix index f9e04691c1cb..e3c92a0e40fc 100644 --- a/pkgs/development/python-modules/semantic-version/default.nix +++ b/pkgs/development/python-modules/semantic-version/default.nix @@ -3,7 +3,6 @@ buildPythonPackage rec { pname = "semantic_version"; version = "2.6.0"; - name = "${pname}${version}"; src = fetchPypi { inherit pname version; diff --git a/pkgs/development/python-modules/send2trash/default.nix b/pkgs/development/python-modules/send2trash/default.nix index 379f5677bd1c..7ea0705f8154 100644 --- a/pkgs/development/python-modules/send2trash/default.nix +++ b/pkgs/development/python-modules/send2trash/default.nix @@ -1,4 +1,5 @@ -{ lib +{ stdenv +, lib , buildPythonPackage , fetchFromGitHub , pytest @@ -16,6 +17,7 @@ buildPythonPackage rec { sha256 = "1w502i5h8xaqf03g6h95h4vs1wqfv6kg925dn63phrwmg1hfz2xx"; }; + doCheck = !stdenv.isDarwin; checkPhase = "HOME=. py.test"; checkInputs = [ pytest configparser ]; diff --git a/pkgs/development/python-modules/sockjs-tornado/default.nix b/pkgs/development/python-modules/sockjs-tornado/default.nix new file mode 100644 index 000000000000..eff799e0d014 --- /dev/null +++ b/pkgs/development/python-modules/sockjs-tornado/default.nix @@ -0,0 +1,20 @@ +{ lib, buildPythonPackage, fetchurl, tornado }: + +buildPythonPackage rec { + name = "sockjs-tornado-${version}"; + version = "1.0.3"; + + src = fetchurl { + url = "mirror://pypi/s/sockjs-tornado/${name}.tar.gz"; + sha256 = "16cff40nniqsyvda1pb2j3b4zwmrw7y2g1vqq78lp20xpmhnwwkd"; + }; + + propagatedBuildInputs = [ tornado ]; + + meta = with lib; { + homepage = http://github.com/mrjoes/sockjs-tornado/; + description = "SockJS python server implementation on top of Tornado framework"; + license = licenses.mit; + maintainers = with maintainers; [ abbradar ]; + }; +} diff --git a/pkgs/development/python-modules/spake2/default.nix b/pkgs/development/python-modules/spake2/default.nix new file mode 100644 index 000000000000..08500aeb4ad1 --- /dev/null +++ b/pkgs/development/python-modules/spake2/default.nix @@ -0,0 +1,25 @@ +{ lib, buildPythonPackage, fetchPypi, hkdf, pytest }: + +buildPythonPackage rec { + pname = "spake2"; + version = "0.8"; + + src = fetchPypi { + inherit pname version; + sha256 = "c17a614b29ee4126206e22181f70a406c618d3c6c62ca6d6779bce95e9c926f4"; + }; + + checkInputs = [ pytest ]; + + propagatedBuildInputs = [ hkdf ]; + + checkPhase = '' + py.test $out + ''; + + meta = with lib; { + description = "SPAKE2 password-authenticated key exchange library"; + homepage = "http://github.com/warner/python-spake2"; + license = licenses.mit; + }; +} diff --git a/pkgs/development/python-modules/sphfile/default.nix b/pkgs/development/python-modules/sphfile/default.nix index 189fa7c932da..8ee4ce76069f 100644 --- a/pkgs/development/python-modules/sphfile/default.nix +++ b/pkgs/development/python-modules/sphfile/default.nix @@ -16,7 +16,7 @@ buildPythonPackage rec { meta = with lib; { description = "Numpy-based NIST SPH audio-file reader"; - homepage = "https://github.com/mcfletch/sphfile"; + homepage = https://github.com/mcfletch/sphfile; license = licenses.mit; maintainers = with maintainers; [ abbradar ]; platforms = platforms.unix; diff --git a/pkgs/development/python-modules/sphinx/default.nix b/pkgs/development/python-modules/sphinx/default.nix index 6f3d0b3c117b..2256bcc7310f 100644 --- a/pkgs/development/python-modules/sphinx/default.nix +++ b/pkgs/development/python-modules/sphinx/default.nix @@ -27,10 +27,10 @@ buildPythonPackage rec { name = "${pname}-${version}"; pname = "Sphinx"; - version = "1.6.6"; + version = "1.7.0"; src = fetchPypi { inherit pname version; - sha256 = "c39a6fa41bd3ec6fc10064329a664ed3a3ca2e27640a823dc520c682e4433cdb"; + sha256 = "278b7923f3f4ed2a1d1359f0ae94d89ac90ddd4189e8362f4b4d3baa2afe6b4a"; }; LC_ALL = "en_US.UTF-8"; diff --git a/pkgs/development/python-modules/sqlalchemy/default.nix b/pkgs/development/python-modules/sqlalchemy/default.nix index 51856ec0da04..18540cb63f8d 100644 --- a/pkgs/development/python-modules/sqlalchemy/default.nix +++ b/pkgs/development/python-modules/sqlalchemy/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "SQLAlchemy"; name = "${pname}-${version}"; - version = "1.2.2"; + version = "1.2.3"; src = fetchPypi { inherit pname version; - sha256 = "64b4720f0a8e033db0154d3824f5bf677cf2797e11d44743cf0aebd2a0499d9d"; + sha256 = "9e9ec143e2e246f385cfb2de8daa89d2fa466279addcb7be9e102988fdf33d24"; }; checkInputs = [ diff --git a/pkgs/development/python-modules/sqlmap/default.nix b/pkgs/development/python-modules/sqlmap/default.nix index dd7fdc173e5e..0fa889b88f26 100644 --- a/pkgs/development/python-modules/sqlmap/default.nix +++ b/pkgs/development/python-modules/sqlmap/default.nix @@ -5,12 +5,12 @@ buildPythonPackage rec { pname = "sqlmap"; - version = "1.2"; + version = "1.2.2"; name = "${pname}-${version}"; src = fetchPypi { inherit pname version; - sha256 = "18ac6392a710f0cc106c28c4e27e43e8f1b25cb46fb8b6714836212607c07b10"; + sha256 = "6256e0d5ab6d465152c8a8a21bdb97b50e155255d6bedd586ce214ed7a1fb9d7"; }; # No tests in archive diff --git a/pkgs/development/python-modules/stripe/default.nix b/pkgs/development/python-modules/stripe/default.nix index 22c047fc54e2..7e7aa4756bbe 100644 --- a/pkgs/development/python-modules/stripe/default.nix +++ b/pkgs/development/python-modules/stripe/default.nix @@ -3,7 +3,7 @@ buildPythonPackage rec { pname = "stripe"; - version = "1.77.1"; + version = "1.77.2"; name = "${pname}-${version}"; # Tests require network connectivity and there's no easy way to disable @@ -12,7 +12,7 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "d1c638b417301849ff4ee0327332cfdec96edda83c79b08af307339138077d59"; + sha256 = "3bcd55108dd2c0e853a91147ee843bc375f35767e64d0f7680e5bd82ddb7fbf1"; }; buildInputs = [ unittest2 mock ]; diff --git a/pkgs/development/python-modules/tabulate/default.nix b/pkgs/development/python-modules/tabulate/default.nix index db7f43c1ea46..b238d58f68d3 100644 --- a/pkgs/development/python-modules/tabulate/default.nix +++ b/pkgs/development/python-modules/tabulate/default.nix @@ -7,7 +7,6 @@ buildPythonPackage rec { version = "0.8.2"; pname = "tabulate"; - name = "${pname}-${version}"; src = fetchPypi { inherit pname version; @@ -25,4 +24,4 @@ buildPythonPackage rec { license = lib.licenses.mit; maintainers = with lib.maintainers; [ fridh ]; }; -} \ No newline at end of file +} diff --git a/pkgs/development/python-modules/tensorflow/default.nix b/pkgs/development/python-modules/tensorflow/default.nix index e51ceb313ef2..85dd30118cc3 100644 --- a/pkgs/development/python-modules/tensorflow/default.nix +++ b/pkgs/development/python-modules/tensorflow/default.nix @@ -3,8 +3,9 @@ , which, swig, binutils, glibcLocales , python, jemalloc, openmpi , numpy, six, protobuf, tensorflow-tensorboard, backports_weakref, mock, enum34, absl-py -, xlaSupport ? true , cudaSupport ? false, nvidia_x11 ? null, cudatoolkit ? null, cudnn ? null +# XLA without CUDA is broken +, xlaSupport ? cudaSupport # Default from ./configure script , cudaCapabilities ? [ "3.5" "5.2" ] , sse42Support ? false @@ -145,9 +146,10 @@ in buildPythonPackage rec { meta = with stdenv.lib; { description = "Computation using data flow graphs for scalable machine learning"; - homepage = "http://tensorflow.org"; + homepage = http://tensorflow.org; license = licenses.asl20; maintainers = with maintainers; [ jyp abbradar ]; platforms = with platforms; if cudaSupport then linux else linux ++ darwin; + broken = !(xlaSupport -> cudaSupport); }; } diff --git a/pkgs/development/python-modules/trezor/default.nix b/pkgs/development/python-modules/trezor/default.nix index cb4b63ade81d..16fc8530a0da 100644 --- a/pkgs/development/python-modules/trezor/default.nix +++ b/pkgs/development/python-modules/trezor/default.nix @@ -1,20 +1,18 @@ -{ lib, fetchPypi, buildPythonPackage, protobuf, hidapi, ecdsa, mnemonic -, requests +{ lib, fetchPypi, buildPythonPackage, + protobuf, hidapi, ecdsa, mnemonic, requests, pyblake2, click, libusb1 }: buildPythonPackage rec { name = "${pname}-${version}"; pname = "trezor"; - version = "0.7.16"; + version = "0.9.0"; src = fetchPypi { inherit pname version; - sha256 = "6bdb69fc125ba705854e21163be6c7da3aa17c2a3a84f40b6d8a3f6e4a8cb314"; + sha256 = "2dd01e11d669cb8f5e40fcf1748bcabc41fb5f41edb010fc807dc3088f9bd7de"; }; - propagatedBuildInputs = [ protobuf hidapi requests mnemonic ]; - - buildInputs = [ ecdsa ]; + propagatedBuildInputs = [ protobuf hidapi ecdsa mnemonic requests pyblake2 click libusb1 ]; # There are no actual tests: "ImportError: No module named tests" doCheck = false; diff --git a/pkgs/development/python-modules/uranium/default.nix b/pkgs/development/python-modules/uranium/default.nix index 24eecf82311a..774799f3b4d8 100644 --- a/pkgs/development/python-modules/uranium/default.nix +++ b/pkgs/development/python-modules/uranium/default.nix @@ -5,7 +5,7 @@ then throw "Uranium not supported for interpreter ${python.executable}" else stdenv.mkDerivation rec { - version = "3.1.0"; + version = "3.2.1"; pname = "uranium"; name = "${pname}-${version}"; @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { owner = "Ultimaker"; repo = "Uranium"; rev = version; - sha256 = "1wz2nk973g8227r9v6j7gry3m0b0ikirkws8sfhysvgj0vgak9yk"; + sha256 = "1p05iw1x3rvb51p6hj57yq6nsjawjba3pyyr4jx924iq96vcc3fz"; }; buildInputs = [ python gettext ]; @@ -30,7 +30,7 @@ stdenv.mkDerivation rec { meta = with stdenv.lib; { description = "A Python framework for building Desktop applications"; - homepage = "https://github.com/Ultimaker/Uranium"; + homepage = https://github.com/Ultimaker/Uranium; license = licenses.agpl3; platforms = platforms.linux; maintainers = with maintainers; [ abbradar ]; diff --git a/pkgs/development/python-modules/virtkey/default.nix b/pkgs/development/python-modules/virtkey/default.nix new file mode 100644 index 000000000000..e18e9f87acd3 --- /dev/null +++ b/pkgs/development/python-modules/virtkey/default.nix @@ -0,0 +1,23 @@ +{ lib, buildPythonPackage, fetchurl, pkgconfig, gtk2, libX11, libXtst, libXi, libxkbfile, xextproto, xproto }: + +buildPythonPackage rec { + name = "virtkey-${version}"; + majorVersion = "0.63"; + version = "${majorVersion}.0"; + + src = fetchurl { + url = "https://launchpad.net/virtkey/${majorVersion}/${version}/+download/virtkey-${version}.tar.gz"; + sha256 = "0hd99hrxn6bh3rxcrdnad5cqjsphrn1s6fzx91q07d44k6cg6qcr"; + }; + + nativeBuildInputs = [ pkgconfig ]; + + buildInputs = [ gtk2 libX11 libXtst libXi libxkbfile xextproto xproto ]; + + meta = with lib; { + description = "Extension to emulate keypresses and to get the layout information from the X server"; + homepage = https://launchpad.net/virtkey; + license = licenses.gpl3; + maintainers = with maintainers; [ abbradar ]; + }; +} diff --git a/pkgs/development/python-modules/voluptuous/default.nix b/pkgs/development/python-modules/voluptuous/default.nix index 00c13cba0669..0d4f250509f0 100644 --- a/pkgs/development/python-modules/voluptuous/default.nix +++ b/pkgs/development/python-modules/voluptuous/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "voluptuous"; - version = "0.10.5"; + version = "0.11.1"; src = fetchPypi { inherit pname version; - sha256 = "15i3gaap8ilhpbah1ffc6q415wkvliqxilc6s69a4rinvkw6cx3s"; + sha256 = "af7315c9fa99e0bfd195a21106c82c81619b42f0bd9b6e287b797c6b6b6a9918"; }; checkInputs = [ nose ]; diff --git a/pkgs/development/python-modules/wakeonlan/default.nix b/pkgs/development/python-modules/wakeonlan/default.nix new file mode 100644 index 000000000000..d4a47138d4ab --- /dev/null +++ b/pkgs/development/python-modules/wakeonlan/default.nix @@ -0,0 +1,18 @@ +{ stdenv, fetchPypi, buildPythonPackage }: + +buildPythonPackage rec { + pname = "wakeonlan"; + version = "1.0.0"; + + src = fetchPypi { + inherit pname version; + sha256 = "1snkyc6ph0bnypqs5yjw35mx3f9ij4808r5i06gl2vhn1rfzgyh1"; + }; + + meta = with stdenv.lib; { + description = "A small python module for wake on lan"; + homepage = https://github.com/remcohaszing/pywakeonlan; + license = licenses.wtfpl; + maintainers = with maintainers; [ peterhoeg ]; + }; +} diff --git a/pkgs/development/python-modules/webassets/default.nix b/pkgs/development/python-modules/webassets/default.nix new file mode 100644 index 000000000000..a5a7957e8ec1 --- /dev/null +++ b/pkgs/development/python-modules/webassets/default.nix @@ -0,0 +1,25 @@ +{ lib, buildPythonPackage, fetchurl, pyyaml, nose, jinja2, mock, pytest }: + +buildPythonPackage rec { + name = "webassets-${version}"; + version = "0.12.1"; + + src = fetchurl { + url = "mirror://pypi/w/webassets/${name}.tar.gz"; + sha256 = "1nrqkpb7z46h2b77xafxihqv3322cwqv6293ngaky4j3ff4cing7"; + }; + + propagatedBuildInputs = [ pyyaml ]; + checkInputs = [ nose jinja2 mock pytest ]; + + # Needs Babel CLI tool + doCheck = false; + checkPhase = "py.test"; + + meta = with lib; { + description = "Media asset management for Python, with glue code for various web frameworks"; + homepage = http://github.com/miracle2k/webassets/; + license = licenses.bsd2; + maintainers = with maintainers; [ abbradar ]; + }; +} diff --git a/pkgs/development/python-modules/webcolors/default.nix b/pkgs/development/python-modules/webcolors/default.nix index c23bffaf142f..d530eda39d97 100644 --- a/pkgs/development/python-modules/webcolors/default.nix +++ b/pkgs/development/python-modules/webcolors/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "webcolors"; - version = "1.7"; + version = "1.8.1"; src = fetchPypi { inherit pname version; - sha256 = "e47e68644d41c0b1f1e4d939cfe4039bdf1ab31234df63c7a4f59d4766487206"; + sha256 = "030562f624467a9901f0b455fef05486a88cfb5daa1e356bd4aacea043850b59"; }; checkPhase = '' diff --git a/pkgs/development/python-modules/websockets_client/default.nix b/pkgs/development/python-modules/websockets_client/default.nix new file mode 100644 index 000000000000..dd6e9200db52 --- /dev/null +++ b/pkgs/development/python-modules/websockets_client/default.nix @@ -0,0 +1,24 @@ +{ stdenv, buildPythonPackage, fetchPypi, six }: +buildPythonPackage rec { + pname = "websocket_client"; + version = "0.47.0"; + + src = fetchPypi { + inherit version pname; + sha256 = "0jb1446053ryp5p25wsr1hjfdzwfm04a6f3pzpcb63bfz96xqlx4"; + }; + + prePatch = '' + # ssl.match_hostname exists in python2.7 version maintained in nixpkgs, + # the dependency is not necessary. + sed -e "s/\['backports.ssl_match_hostname'\]/\[\]/" -i setup.py + ''; + + propagatedBuildInputs = [ six ]; + + meta = with stdenv.lib; { + homepage = https://github.com/liris/websocket-client; + description = "Websocket client for python"; + license = licenses.lgpl2; + }; +} diff --git a/pkgs/development/python-modules/widgetsnbextension/default.nix b/pkgs/development/python-modules/widgetsnbextension/default.nix index e455f2334110..3228e928e193 100644 --- a/pkgs/development/python-modules/widgetsnbextension/default.nix +++ b/pkgs/development/python-modules/widgetsnbextension/default.nix @@ -8,11 +8,11 @@ buildPythonPackage rec { pname = "widgetsnbextension"; name = "${pname}-${version}"; - version = "3.1.3"; + version = "3.1.4"; src = fetchPypi { inherit pname version; - sha256 = "02edabcaeaa247721df8027f660f3384c20f30c4865a7ea5dd80685c368736df"; + sha256 = "79f164a644620abbe351440a70468ac3a5b22b392afa4577c8d5f91577a2669b"; }; propagatedBuildInputs = [ notebook ]; diff --git a/pkgs/development/python-modules/xstatic-bootbox/default.nix b/pkgs/development/python-modules/xstatic-bootbox/default.nix new file mode 100644 index 000000000000..68c81157eb08 --- /dev/null +++ b/pkgs/development/python-modules/xstatic-bootbox/default.nix @@ -0,0 +1,25 @@ +{ buildPythonPackage +, lib +, fetchPypi +}: + +buildPythonPackage rec { + pname = "XStatic-Bootbox"; + version = "4.3.0.1"; + + src = fetchPypi { + inherit version pname; + sha256 = "0wks1lsqngn3gvlhzrvaan1zj8w4wr58xi0pfqhrzckbghvvr0gj"; + }; + + # no tests implemented + doCheck = false; + + meta = with lib;{ + homepage = http://bootboxjs.com; + description = "Bootboxjs packaged static files for python"; + license = licenses.mit; + maintainers = with maintainers; [ makefu ]; + }; + +} diff --git a/pkgs/development/python-modules/xstatic-bootstrap/default.nix b/pkgs/development/python-modules/xstatic-bootstrap/default.nix new file mode 100644 index 000000000000..757c2cc240ed --- /dev/null +++ b/pkgs/development/python-modules/xstatic-bootstrap/default.nix @@ -0,0 +1,25 @@ +{ buildPythonPackage +, lib +, fetchPypi +}: + +buildPythonPackage rec { + pname = "XStatic-Bootstrap"; + version = "3.3.5.1"; + + src = fetchPypi { + inherit version pname; + sha256 = "0jzjq3d4vp2shd2n20f9y53jnnk1cvphkj1v0awgrf18qsy2bmin"; + }; + + # no tests implemented + doCheck = false; + + meta = with lib;{ + homepage = http://getbootstrap.com; + description = "Bootstrap packaged static files for python"; + license = licenses.mit; + maintainers = with maintainers; [ makefu ]; + }; + +} diff --git a/pkgs/development/python-modules/xstatic-jquery-file-upload/default.nix b/pkgs/development/python-modules/xstatic-jquery-file-upload/default.nix new file mode 100644 index 000000000000..0cf029c68a59 --- /dev/null +++ b/pkgs/development/python-modules/xstatic-jquery-file-upload/default.nix @@ -0,0 +1,28 @@ +{ buildPythonPackage +, lib +, fetchPypi +, xstatic-jquery +}: + +buildPythonPackage rec { + pname = "XStatic-jQuery-File-Upload"; + version = "9.7.0.1"; + + src = fetchPypi { + inherit version pname; + sha256 = "0d5za18lhzhb54baxq8z73wazq801n3qfj5vgcz7ri3ngx7nb0cg"; + }; + + # no tests implemented + doCheck = false; + + propagatedBuildInputs = [ xstatic-jquery ]; + + meta = with lib;{ + homepage = http://plugins.jquery.com/project/jQuery-File-Upload; + description = "jquery-file-upload packaged static files for python"; + license = licenses.mit; + maintainers = with maintainers; [ makefu ]; + }; + +} diff --git a/pkgs/development/python-modules/xstatic-jquery-ui/default.nix b/pkgs/development/python-modules/xstatic-jquery-ui/default.nix new file mode 100644 index 000000000000..1b884a97eb22 --- /dev/null +++ b/pkgs/development/python-modules/xstatic-jquery-ui/default.nix @@ -0,0 +1,28 @@ +{ buildPythonPackage +, lib +, fetchPypi +, xstatic-jquery +}: + +buildPythonPackage rec { + pname = "XStatic-jquery-ui"; + version = "1.12.0.1"; + + src = fetchPypi { + inherit version pname; + sha256 = "0w7mabv6qflpd47g33j3ggp5rv17mqk0xz3bsdswcj97wqpga2l2"; + }; + + # no tests implemented + doCheck = false; + + propagatedBuildInputs = [ xstatic-jquery ]; + + meta = with lib;{ + homepage = http://jqueryui.com/; + description = "jquery-ui packaged static files for python"; + license = licenses.mit; + maintainers = with maintainers; [ makefu ]; + }; + +} diff --git a/pkgs/development/python-modules/xstatic-jquery/default.nix b/pkgs/development/python-modules/xstatic-jquery/default.nix new file mode 100644 index 000000000000..c414e0a070ae --- /dev/null +++ b/pkgs/development/python-modules/xstatic-jquery/default.nix @@ -0,0 +1,25 @@ +{ buildPythonPackage +, lib +, fetchPypi +}: + +buildPythonPackage rec { + pname = "XStatic-jQuery"; + version = "1.10.2.1"; + + src = fetchPypi { + inherit version pname; + sha256 = "018kx4zijflcq8081xx6kmiqf748bsjdq7adij2k91bfp1mnlhc3"; + }; + + # no tests implemented + doCheck = false; + + meta = with lib;{ + homepage = http://jquery.org; + description = "jquery packaged static files for python"; + license = licenses.mit; + maintainers = with maintainers; [ makefu ]; + }; + +} diff --git a/pkgs/development/python-modules/xstatic-pygments/default.nix b/pkgs/development/python-modules/xstatic-pygments/default.nix new file mode 100644 index 000000000000..8ec9b77860c2 --- /dev/null +++ b/pkgs/development/python-modules/xstatic-pygments/default.nix @@ -0,0 +1,25 @@ +{ buildPythonPackage +, lib +, fetchPypi +}: + +buildPythonPackage rec { + pname = "XStatic-Pygments"; + version = "1.6.0.1"; + + src = fetchPypi { + inherit version pname; + sha256 = "0fjqgg433wfdnswn7fad1g6k2x6mf24wfnay2j82j0fwgkdxrr7m"; + }; + + # no tests implemented + doCheck = false; + + meta = with lib;{ + homepage = http://pygments.org; + description = "pygments packaged static files for python"; + license = licenses.mit; + maintainers = with maintainers; [ makefu ]; + }; + +} diff --git a/pkgs/development/python-modules/xstatic/default.nix b/pkgs/development/python-modules/xstatic/default.nix new file mode 100644 index 000000000000..02931215b8d3 --- /dev/null +++ b/pkgs/development/python-modules/xstatic/default.nix @@ -0,0 +1,25 @@ +{ buildPythonPackage +, lib +, fetchPypi +}: + +buildPythonPackage rec { + pname = "XStatic"; + version = "1.0.1"; + + src = fetchPypi { + inherit version pname; + sha256 = "09npcsyf1ccygjs0qc8kdsv4qqy8gm1m6iv63g9y1fgbcry3vj8f"; + }; + + # no tests implemented + doCheck = false; + + meta = with lib;{ + homepage = https://bitbucket.org/thomaswaldmann/xstatic; + description = "Base packaged static files for python"; + license = licenses.mit; + maintainers = with maintainers; [ makefu ]; + }; + +} diff --git a/pkgs/development/python-modules/yapf/default.nix b/pkgs/development/python-modules/yapf/default.nix index 05913ab61c5e..d257db704451 100644 --- a/pkgs/development/python-modules/yapf/default.nix +++ b/pkgs/development/python-modules/yapf/default.nix @@ -2,12 +2,12 @@ buildPythonPackage rec { pname = "yapf"; - version = "0.20.1"; + version = "0.20.2"; name = "${pname}-${version}"; src = fetchPypi { inherit pname version; - sha256 = "bd19f246be7193ad2acdc04702b92315f1ae28d49c82f6671afdeefe9d32f468"; + sha256 = "7f5efdb7edf0318b91e53721d934580a77153e24a222f52f6e1c3b7629aead43"; }; meta = with stdenv.lib; { diff --git a/pkgs/development/python-modules/zodbpickle/default.nix b/pkgs/development/python-modules/zodbpickle/default.nix index 53dd8680c315..108f5395ece4 100644 --- a/pkgs/development/python-modules/zodbpickle/default.nix +++ b/pkgs/development/python-modules/zodbpickle/default.nix @@ -5,13 +5,13 @@ buildPythonPackage rec { pname = "zodbpickle"; - version = "0.7.0"; + version = "1.0"; name = "${pname}-${version}"; disabled = isPyPy; # https://github.com/zopefoundation/zodbpickle/issues/10 src = fetchPypi { inherit pname version; - sha256 = "95a247fb17bce980af8d548af70ac5bd1bad22773f242eb8efa24428efa909a8"; + sha256 = "3af9169fb1d5901cf6693ab356b0dfda20ad2cacc5673fad59b4449ed50d5399"; }; # fails.. diff --git a/pkgs/development/r-modules/bioc-annotation-packages.nix b/pkgs/development/r-modules/bioc-annotation-packages.nix index d623433593cd..6707dd1e3c73 100644 --- a/pkgs/development/r-modules/bioc-annotation-packages.nix +++ b/pkgs/development/r-modules/bioc-annotation-packages.nix @@ -4,8 +4,10 @@ # Rscript generate-r-packages.R bioc-annotation >new && mv new bioc-annotation-packages.nix { self, derive }: -let derive2 = derive { rVersion = "3.4"; }; +let derive2 = derive { biocVersion = "3.6"; }; in with self; { + AHCytoBands = derive2 { name="AHCytoBands"; version="0.99.0"; sha256="0g92nz33rx14zl5can7s701bipdgz7rxqygvvc22c4a0qj52ijnq"; depends=[]; }; + AHEnsDbs = derive2 { name="AHEnsDbs"; version="1.0.4"; sha256="0wchfmz3fl0vx7mmddh9s6sy04xvjh6nkw61yx1ddcdhzrwa45i7"; depends=[AnnotationHubData ensembldb]; }; BSgenome_Alyrata_JGI_v1 = derive2 { name="BSgenome.Alyrata.JGI.v1"; version="1.0.0"; sha256="06549kkzy36n378zb61lrf9zardncp7i20r73rmmiq1pnfjp3gww"; depends=[BSgenome]; }; BSgenome_Amellifera_BeeBase_assembly4 = derive2 { name="BSgenome.Amellifera.BeeBase.assembly4"; version="1.4.0"; sha256="02zs16q441zcbfp7xvv1gny5nn02ivfr8md1wh5s5rpnj6sdl6kj"; depends=[BSgenome]; }; BSgenome_Amellifera_UCSC_apiMel2 = derive2 { name="BSgenome.Amellifera.UCSC.apiMel2"; version="1.4.0"; sha256="1967w7aly7qydykk7rar712kvgsav3zjr4kirybkj17nwiynd74g"; depends=[BSgenome]; }; @@ -95,13 +97,13 @@ in with self; { BSgenome_Vvinifera_URGI_IGGP8X = derive2 { name="BSgenome.Vvinifera.URGI.IGGP8X"; version="0.1"; sha256="0v0hi2pbbi5ynd92bvbv4bzr7bgv48kvyz62hdv7k9gh7s5pg0id"; depends=[BSgenome]; }; ChemmineDrugs = derive2 { name="ChemmineDrugs"; version="1.0.0"; sha256="0h4jxcb6vkf9ijljas7yvcx6vmrd5rpjgj202cf2jb9hx8h9497i"; depends=[BiocGenerics ChemmineR RSQLite]; }; DO_db = derive2 { name="DO.db"; version="2.9"; sha256="10bqqa124l61ivzy4mdd3z3ar9a6537qbxw23pc4y9w8a6dwnavn"; depends=[AnnotationDbi]; }; - EnsDb_Hsapiens_v75 = derive2 { name="EnsDb.Hsapiens.v75"; version="2.1.0"; sha256="020vrkfjs7bwnz897l3x4fmc1bnzn3n1zpmv5mmnn8fm35qcrai8"; depends=[ensembldb]; }; - EnsDb_Hsapiens_v79 = derive2 { name="EnsDb.Hsapiens.v79"; version="2.1.0"; sha256="1684sl2smmp2bdkfzv9v5f04100p4hqkfhn1m73pyppygkpak2hp"; depends=[ensembldb]; }; - EnsDb_Hsapiens_v86 = derive2 { name="EnsDb.Hsapiens.v86"; version="2.1.0"; sha256="1xbvzl8abgcafzd3f8kaypq5b6lpa8j92m2skgsagn0mfpqwqk4s"; depends=[ensembldb]; }; - EnsDb_Mmusculus_v75 = derive2 { name="EnsDb.Mmusculus.v75"; version="2.1.0"; sha256="0r6j0andx2mbrjk7wfhr4k8cwpll63i08m0073fik0cy08hy0f6l"; depends=[ensembldb]; }; - EnsDb_Mmusculus_v79 = derive2 { name="EnsDb.Mmusculus.v79"; version="2.1.0"; sha256="12shvxcj8jjzn5mil6vfil4a9jnrfs41jlll4wypgs4iyb0m8f7g"; depends=[ensembldb]; }; - EnsDb_Rnorvegicus_v75 = derive2 { name="EnsDb.Rnorvegicus.v75"; version="2.1.0"; sha256="1bdr417m0dk2qdkz4ydfzhl3q728c9vl8k5w84x4g8cqv0bv58lv"; depends=[ensembldb]; }; - EnsDb_Rnorvegicus_v79 = derive2 { name="EnsDb.Rnorvegicus.v79"; version="2.1.0"; sha256="1nri32xkz764nnpxfh8hbp6c8f8xd565jl5hwhvn6ml2awjqxd83"; depends=[ensembldb]; }; + EnsDb_Hsapiens_v75 = derive2 { name="EnsDb.Hsapiens.v75"; version="2.99.0"; sha256="0jx6rf6v0j8yr07q3c1h7s121901dc400nm6xaiv4i7kb5czjn9c"; depends=[ensembldb]; }; + EnsDb_Hsapiens_v79 = derive2 { name="EnsDb.Hsapiens.v79"; version="2.99.0"; sha256="0k94iml0417m3k086d0bzd83fndyb2kn7pimsfzcdmafgy6sxwgg"; depends=[ensembldb]; }; + EnsDb_Hsapiens_v86 = derive2 { name="EnsDb.Hsapiens.v86"; version="2.99.0"; sha256="1gp7xrzddpvmh2vrcp571wyy00skxgxfl39ksj4h0hm1qay0fb2m"; depends=[ensembldb]; }; + EnsDb_Mmusculus_v75 = derive2 { name="EnsDb.Mmusculus.v75"; version="2.99.0"; sha256="00c92l6ii2p3hila8xpblmidx8pmy11x1xh4gnwsq3f3rn1q200g"; depends=[ensembldb]; }; + EnsDb_Mmusculus_v79 = derive2 { name="EnsDb.Mmusculus.v79"; version="2.99.0"; sha256="1zpmq7v55if6q9r0h883q9k8l70ym20b01m9hxf121wb256rl9f7"; depends=[ensembldb]; }; + EnsDb_Rnorvegicus_v75 = derive2 { name="EnsDb.Rnorvegicus.v75"; version="2.99.0"; sha256="02sx9l1p67ihkn0dfzbi08cpp8x4k2mjdqn7hvzfiaibsbqp70bb"; depends=[ensembldb]; }; + EnsDb_Rnorvegicus_v79 = derive2 { name="EnsDb.Rnorvegicus.v79"; version="2.99.0"; sha256="1ki2hrn0a55f3ipxny0hpgl5ld9pjkhcwmvvqwwd99f3sqbxf3br"; depends=[ensembldb]; }; FDb_FANTOM4_promoters_hg19 = derive2 { name="FDb.FANTOM4.promoters.hg19"; version="1.0.0"; sha256="04sn5x1r5fcbghzw6n1bvy0z8zyhrbk86wsqz1p5gk665vicz8rw"; depends=[AnnotationDbi Biostrings GenomicFeatures]; }; FDb_InfiniumMethylation_hg18 = derive2 { name="FDb.InfiniumMethylation.hg18"; version="2.2.0"; sha256="0vwzqzj49imjdsn8ssiwqi7qic7rqw5pbsiinyxgy7y10fn2i42a"; depends=[AnnotationDbi Biostrings GenomicFeatures org_Hs_eg_db TxDb_Hsapiens_UCSC_hg18_knownGene]; }; FDb_InfiniumMethylation_hg19 = derive2 { name="FDb.InfiniumMethylation.hg19"; version="2.2.0"; sha256="0gq90fvph6kgrpjb89nvzq6hl1k24swn19rgjh5g98l86mja6nk0"; depends=[AnnotationDbi Biostrings GenomicFeatures org_Hs_eg_db TxDb_Hsapiens_UCSC_hg19_knownGene]; }; @@ -109,7 +111,8 @@ in with self; { FDb_UCSC_snp137common_hg19 = derive2 { name="FDb.UCSC.snp137common.hg19"; version="1.0.0"; sha256="1q1r7rk29q0zlzxz6fvfy1kjfli6wxzvhvhhfnf3z4ksy5332q63"; depends=[AnnotationDbi GenomicFeatures]; }; FDb_UCSC_tRNAs = derive2 { name="FDb.UCSC.tRNAs"; version="1.0.1"; sha256="1dymdalx9fzrplxyc0fd9faa4r5jimi7zyry9k65lyz1pabpkwqz"; depends=[AnnotationDbi GenomicFeatures]; }; GGHumanMethCancerPanelv1_db = derive2 { name="GGHumanMethCancerPanelv1.db"; version="1.4.1"; sha256="0ag1pkbh4mx4aplfrrz1q4f4cl05mczq9pcsfkd1071qk51dcwvx"; depends=[AnnotationDbi AnnotationForge org_Hs_eg_db]; }; - GO_db = derive2 { name="GO.db"; version="3.4.0"; sha256="02cj8kqi5w39jwcs8gp1dgj08sah262ppxnkz4h3qd0w191y8yyl"; depends=[AnnotationDbi]; }; + GO_db = derive2 { name="GO.db"; version="3.5.0"; sha256="02d1mn1al3q7qvhx1ylrr3ar4w4iw0qyi5d89v2336rzwk9maq35"; depends=[AnnotationDbi]; }; + GenomeInfoDbData = derive2 { name="GenomeInfoDbData"; version="1.0.0"; sha256="0xp8hyc4r3lz76i0x8r9lp74h2j8p7fcrn7nqmjhx5kn9bdp7fyp"; depends=[]; }; Homo_sapiens = derive2 { name="Homo.sapiens"; version="1.3.1"; sha256="151vj7h5p1c8yd5swrchk46z469p135wk50hvkl0nhgndvy0jj01"; depends=[AnnotationDbi GenomicFeatures GO_db org_Hs_eg_db OrganismDbi TxDb_Hsapiens_UCSC_hg19_knownGene]; }; Hs6UG171_db = derive2 { name="Hs6UG171.db"; version="3.2.3"; sha256="034aady3hy8j9bm7pbl8l8h0gcfnzmpyxg9l9s1ky0pj7ryzr93a"; depends=[AnnotationDbi org_Hs_eg_db]; }; HsAgilentDesign026652_db = derive2 { name="HsAgilentDesign026652.db"; version="3.2.3"; sha256="0x6nxvzmc8k4qp382ca32y58awkxpg0b3kc7m1mz9iag6sq7c5vx"; depends=[AnnotationDbi org_Hs_eg_db]; }; @@ -121,111 +124,105 @@ in with self; { IlluminaHumanMethylation27k_db = derive2 { name="IlluminaHumanMethylation27k.db"; version="1.4.8"; sha256="0zw0n4a9v42ifmvw2hfzzvl8jz1d7f00ia59ljhcvvw9aj12q4zs"; depends=[AnnotationDbi org_Hs_eg_db]; }; IlluminaHumanMethylation27kanno_ilmn12_hg19 = derive2 { name="IlluminaHumanMethylation27kanno.ilmn12.hg19"; version="0.6.0"; sha256="0idy6xn3x5c640d47q52na03s29pj4l38dpxy8q9mh6hy8g29vp3"; depends=[minfi]; }; IlluminaHumanMethylation27kmanifest = derive2 { name="IlluminaHumanMethylation27kmanifest"; version="0.4.0"; sha256="1kvz6z7g61zdrc1i93wsk1zv5mwcswfkxkl114644q09djwbz1fx"; depends=[minfi]; }; - IlluminaHumanMethylation450k_db = derive2 { name="IlluminaHumanMethylation450k.db"; version="2.0.9"; sha256="1zmm65qnm95w9c8z30c9vncca451npbhhnlkpkpp894svsakxziz"; depends=[AnnotationDbi org_Hs_eg_db]; }; IlluminaHumanMethylation450kanno_ilmn12_hg19 = derive2 { name="IlluminaHumanMethylation450kanno.ilmn12.hg19"; version="0.6.0"; sha256="059vlxsx3p3fcnywwirahsc6mlk813zpqnbv0jsrag6x5bb8z6r4"; depends=[minfi]; }; IlluminaHumanMethylation450kmanifest = derive2 { name="IlluminaHumanMethylation450kmanifest"; version="0.4.0"; sha256="0qx75xwifrbkqmbkd8dhf44c34ibmbivqh7y8rvgrsizmi5ybcj1"; depends=[minfi]; }; IlluminaHumanMethylation450kprobe = derive2 { name="IlluminaHumanMethylation450kprobe"; version="2.0.6"; sha256="1iah0rw7d8qvgwvn6n2l4cln39ky010gqpd9shml45m48m6whiia"; depends=[AnnotationDbi]; }; IlluminaHumanMethylationEPICanno_ilm10b2_hg19 = derive2 { name="IlluminaHumanMethylationEPICanno.ilm10b2.hg19"; version="0.6.0"; sha256="0sfdx0lpiw3l4passx93pjfswd0iv3hxdc7ciazh53baib3xpv2d"; depends=[minfi]; }; + IlluminaHumanMethylationEPICanno_ilm10b3_hg19 = derive2 { name="IlluminaHumanMethylationEPICanno.ilm10b3.hg19"; version="0.6.0"; sha256="1rdkvbpbz8a8bd9ipycfmgn8a3x519abhwywka21ii9ziv3s6ah6"; depends=[minfi]; }; + IlluminaHumanMethylationEPICanno_ilm10b4_hg19 = derive2 { name="IlluminaHumanMethylationEPICanno.ilm10b4.hg19"; version="0.6.0"; sha256="0687b4k8hwfc18qgdd9ypv1skp37jd204fszba0gmrv3dc92i09c"; depends=[minfi]; }; IlluminaHumanMethylationEPICmanifest = derive2 { name="IlluminaHumanMethylationEPICmanifest"; version="0.3.0"; sha256="0alhjda5g186z8b1nsmnpfswrlj7prdz8mkwx60wkkl6hkcnk6p3"; depends=[minfi]; }; JazaeriMetaData_db = derive2 { name="JazaeriMetaData.db"; version="3.2.3"; sha256="04lvcmm4ybxkfwgbiwcnpyj6kpbd0gd7jz6ijlbbvv6zdgdmvykb"; depends=[AnnotationDbi org_Hs_eg_db]; }; KEGG_db = derive2 { name="KEGG.db"; version="3.2.3"; sha256="0qv9in1nmnqcbjxh0y45x33xyw9zdp4jf5hmlvcsh1pclcq4dsh2"; depends=[AnnotationDbi]; }; LAPOINTE_db = derive2 { name="LAPOINTE.db"; version="3.2.3"; sha256="0960gy5p4ybs5zs6251cgc3nk5a9gsh1nh23gkbkr3gc8jddinfm"; depends=[AnnotationDbi org_Hs_eg_db]; }; LowMACAAnnotation = derive2 { name="LowMACAAnnotation"; version="0.99.3"; sha256="0ri301ci54s8wwkah1jccy5h44xg8yjk08j5b15qmdsm25hli4wm"; depends=[]; }; LymphoSeqDB = derive2 { name="LymphoSeqDB"; version="0.99.2"; sha256="1cdyn2imjh4zr23szndc4vwyiacxs1jsp14gil2dyq9aifa25qr7"; depends=[]; }; - MafDb_1Kgenomes_phase1_hs37d5 = derive2 { name="MafDb.1Kgenomes.phase1.hs37d5"; version="3.4.0"; sha256="180z52y03gdkf36ycr76vcs1mz9qdbwywzxrbcj6yb5vcj8i5hdx"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; }; - MafDb_1Kgenomes_phase3_hs37d5 = derive2 { name="MafDb.1Kgenomes.phase3.hs37d5"; version="3.4.0"; sha256="10968v506gmhzrnjz92z2p4484dbhgs6a20lkhs6f79bl66ckdbj"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; }; - MafDb_ESP6500SI_V2_SSA137 = derive2 { name="MafDb.ESP6500SI.V2.SSA137"; version="3.4.0"; sha256="1s5vqp3fnkswiv2slsh0wkd286psdhqcwvchcjq3gm4hq86h4pwh"; depends=[AnnotationDbi Biobase Biostrings GenomicRanges IRanges Rsamtools RSQLite VariantAnnotation VariantFiltering]; }; - MafDb_ESP6500SI_V2_SSA137_GRCh38 = derive2 { name="MafDb.ESP6500SI.V2.SSA137.GRCh38"; version="3.4.0"; sha256="1qaqqkshvrf7y6lwnnh8n47zvb35vn23l8vmvm29przz8y2xz22v"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; }; - MafDb_ESP6500SI_V2_SSA137_hs37d5 = derive2 { name="MafDb.ESP6500SI.V2.SSA137.hs37d5"; version="3.4.0"; sha256="0gxj4nghd99r6ivgzvs86gl8j1frr8laira4gld0vmfp0a4iv5fy"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; }; - MafDb_ExAC_r0_3_1_nonTCGA_snvs_hs37d5 = derive2 { name="MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5"; version="3.4.0"; sha256="060750f8zz3gasgnq6smzq7f68nd9jh12wb8gpivc3xklx7gcrk9"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; }; - MafDb_ExAC_r0_3_1_snvs_hs37d5 = derive2 { name="MafDb.ExAC.r0.3.1.snvs.hs37d5"; version="3.4.0"; sha256="0kq7c2zqzm0g4mbdzqgxq5bklsr2n0cm8x97gn3cfbf61y96ngqw"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; }; - MeSH_AOR_db = derive2 { name="MeSH.AOR.db"; version="1.7.0"; sha256="16h0yvjmrp8x5a0gqzpd9zc2f7q89pr1jsqqwxa44i8hqrgan0zp"; depends=[MeSHDbi]; }; - MeSH_Aca_eg_db = derive2 { name="MeSH.Aca.eg.db"; version="1.7.0"; sha256="04wqdv5z7r2lv49711k0z6vs408yyp96vnsmvyjh15m2bx3bbp3s"; depends=[MeSHDbi]; }; - MeSH_Aga_PEST_eg_db = derive2 { name="MeSH.Aga.PEST.eg.db"; version="1.7.0"; sha256="1k7kx59k9q6hd2svxi233bgq06h3wd6ahcm5lyy2i0br5crysbir"; depends=[MeSHDbi]; }; - MeSH_Ame_eg_db = derive2 { name="MeSH.Ame.eg.db"; version="1.7.0"; sha256="08wi41vxxb5ssbgz019dq5n4li0vfnv737iaavmy07hymh6js9v8"; depends=[MeSHDbi]; }; - MeSH_Aml_eg_db = derive2 { name="MeSH.Aml.eg.db"; version="1.7.0"; sha256="0l0a60mv7s08aflgra3ynkpr455953fr6lxv67xwkjag8k14gsi1"; depends=[MeSHDbi]; }; - MeSH_Ana_eg_db = derive2 { name="MeSH.Ana.eg.db"; version="1.7.0"; sha256="0ix24hj6g3n44g5g4f22dv84q3w6k588san83048x7w946774jf5"; depends=[MeSHDbi]; }; - MeSH_Ani_FGSC_eg_db = derive2 { name="MeSH.Ani.FGSC.eg.db"; version="1.7.0"; sha256="1dagpmrwmsgb8hylc69wic3qfl0cfs0qp9ib32w6qv9y71zg4i1c"; depends=[MeSHDbi]; }; - MeSH_Ath_eg_db = derive2 { name="MeSH.Ath.eg.db"; version="1.7.0"; sha256="02dhvpzacq6v785q4r5r5d6sm0wzqrgm1k7ajn7h3y8v3gjyymap"; depends=[MeSHDbi]; }; - MeSH_Bfl_eg_db = derive2 { name="MeSH.Bfl.eg.db"; version="1.7.0"; sha256="1sv8g45lay1fijlnryza8nz3hf1r2lvcclf3kd1x6iw6fi0yn4q2"; depends=[MeSHDbi]; }; - MeSH_Bsu_168_eg_db = derive2 { name="MeSH.Bsu.168.eg.db"; version="1.7.0"; sha256="16xkz7cbg64rcgv82baxvxnyy5gg16l9cl97xdlk4wvzkyp944hy"; depends=[MeSHDbi]; }; - MeSH_Bsu_TUB10_eg_db = derive2 { name="MeSH.Bsu.TUB10.eg.db"; version="1.7.0"; sha256="1d7i7q78fdnr73a0qdpcwb28jk5gj77af4vyz708gw1803l35gb1"; depends=[MeSHDbi]; }; - MeSH_Bta_eg_db = derive2 { name="MeSH.Bta.eg.db"; version="1.7.0"; sha256="0lbq02vslnv1gj01ill14hf15mncqbwx7p872c8whvdkziwrvki8"; depends=[MeSHDbi]; }; - MeSH_Cal_SC5314_eg_db = derive2 { name="MeSH.Cal.SC5314.eg.db"; version="1.7.0"; sha256="12nfjk5qndfrg4p11nfy392nzsrgd196qrxiqx36vffbindpmykd"; depends=[MeSHDbi]; }; - MeSH_Cbr_eg_db = derive2 { name="MeSH.Cbr.eg.db"; version="1.7.0"; sha256="128hslq3vs4psp64vi6vj84za2kbh0jwlc20j2ivnjkrr30fsb2h"; depends=[MeSHDbi]; }; - MeSH_Cel_eg_db = derive2 { name="MeSH.Cel.eg.db"; version="1.7.0"; sha256="1x5l0p0iiwqg7ci7nirwcsarg33b43clrbvr2cf20rxhc1valmpz"; depends=[MeSHDbi]; }; - MeSH_Cfa_eg_db = derive2 { name="MeSH.Cfa.eg.db"; version="1.7.0"; sha256="1y87i8x6ismji8y6i6yibz5zacf4486dkzmmxggy6ly80lisklb2"; depends=[MeSHDbi]; }; - MeSH_Cin_eg_db = derive2 { name="MeSH.Cin.eg.db"; version="1.7.0"; sha256="05mn2a7fb3zcfzqwl60zp946xyp0kdr5ld7nxh79yxwglhb2r6v0"; depends=[MeSHDbi]; }; - MeSH_Cja_eg_db = derive2 { name="MeSH.Cja.eg.db"; version="1.7.0"; sha256="0hii578hva5aa388zkiarm07w437ccci3qpskd8nl0qyj1xmpb72"; depends=[MeSHDbi]; }; - MeSH_Cpo_eg_db = derive2 { name="MeSH.Cpo.eg.db"; version="1.7.0"; sha256="1nm83ydgfzb43agra99sp10a513fn69yzxg430f0qdwaw564c85y"; depends=[MeSHDbi]; }; - MeSH_Cre_eg_db = derive2 { name="MeSH.Cre.eg.db"; version="1.7.0"; sha256="1gnvf3qm17xa1q0szb4gqnslws6g026x79hmjg7fnkcyn6faxgy9"; depends=[MeSHDbi]; }; - MeSH_Dan_eg_db = derive2 { name="MeSH.Dan.eg.db"; version="1.7.0"; sha256="0qnj09hpnmpxwj448wl4vdpzzmdm1w9m4gq3r2pak30fp5l2mv9i"; depends=[MeSHDbi]; }; - MeSH_Dda_3937_eg_db = derive2 { name="MeSH.Dda.3937.eg.db"; version="1.7.0"; sha256="14z8gbnj6jjh2v76qqpikylaz781gfag6r199hkq20pfph10hld7"; depends=[MeSHDbi]; }; - MeSH_Ddi_AX4_eg_db = derive2 { name="MeSH.Ddi.AX4.eg.db"; version="1.7.0"; sha256="0114vi0k57nv6pxq74c4h38b4yavs74vzidm8gg0pws2pxk8grah"; depends=[MeSHDbi]; }; - MeSH_Der_eg_db = derive2 { name="MeSH.Der.eg.db"; version="1.7.0"; sha256="0ia2xp2bl6bb497gscqbxyd9kd33bynhyg5avvyfddkhpnljv5dx"; depends=[MeSHDbi]; }; - MeSH_Dgr_eg_db = derive2 { name="MeSH.Dgr.eg.db"; version="1.7.0"; sha256="0rgjng9g69kwhh01kww5mahwbikiyc8qgzh363j2m7piqmsc5siy"; depends=[MeSHDbi]; }; - MeSH_Dme_eg_db = derive2 { name="MeSH.Dme.eg.db"; version="1.7.0"; sha256="0m4n7wfxxgw5i9zpcss25x1n47bpshvca03cigfmxaqvh3lagf2n"; depends=[MeSHDbi]; }; - MeSH_Dmo_eg_db = derive2 { name="MeSH.Dmo.eg.db"; version="1.7.0"; sha256="1hchnrhgvk18cs8hzg7dvf2fqrpk7fqgarkp23h325clrrh243l0"; depends=[MeSHDbi]; }; - MeSH_Dpe_eg_db = derive2 { name="MeSH.Dpe.eg.db"; version="1.7.0"; sha256="19bpjyxja7clnyvhcwfv939z1xplxj5naz4vpchs555arzx0c2m4"; depends=[MeSHDbi]; }; - MeSH_Dre_eg_db = derive2 { name="MeSH.Dre.eg.db"; version="1.7.0"; sha256="1njf3r6dfcvs2734mdsb3zlpkqgip9nnmmaxfz7wy3fqhn2ddyqa"; depends=[MeSHDbi]; }; - MeSH_Dse_eg_db = derive2 { name="MeSH.Dse.eg.db"; version="1.7.0"; sha256="0i66f7g4zfz44gnrqgl7mw0k7kadj6pmsqkk62ik2af783y9cv0r"; depends=[MeSHDbi]; }; - MeSH_Dsi_eg_db = derive2 { name="MeSH.Dsi.eg.db"; version="1.7.0"; sha256="10ndr1g76d955gii8m91l5nfvxxim3k7b5fk9r7d8fnzwagjnpij"; depends=[MeSHDbi]; }; - MeSH_Dvi_eg_db = derive2 { name="MeSH.Dvi.eg.db"; version="1.7.0"; sha256="1nwig8czz65cfrq1mw62h85wh9wch69b5i12iry85x1567q7sfbv"; depends=[MeSHDbi]; }; - MeSH_Dya_eg_db = derive2 { name="MeSH.Dya.eg.db"; version="1.7.0"; sha256="1f93fnclsp6zmza6blwkfj5ncmxs8ihjqxr9dh8xjqciyb7wfmw5"; depends=[MeSHDbi]; }; - MeSH_Eco_55989_eg_db = derive2 { name="MeSH.Eco.55989.eg.db"; version="1.7.0"; sha256="0328rxhmhhmspylzx7sdmk3mlbx9hndmpfc3fkrdr2n9a8zirlwp"; depends=[MeSHDbi]; }; - MeSH_Eco_CFT073_eg_db = derive2 { name="MeSH.Eco.CFT073.eg.db"; version="1.4.0"; sha256="0r7hlxd5k9n9shq3wj5ldqj00apvx4bv8h38v2i4adv29s5x7973"; depends=[MeSHDbi]; }; - MeSH_Eco_ED1a_eg_db = derive2 { name="MeSH.Eco.ED1a.eg.db"; version="1.7.0"; sha256="0x6sn0zhqm5gcd9is5ka5hg24kvlyk3qc4pnyjmc88cgfz90cqqq"; depends=[MeSHDbi]; }; - MeSH_Eco_HS_eg_db = derive2 { name="MeSH.Eco.HS.eg.db"; version="1.4.0"; sha256="0gyrfjyp3k5jbcg92qzz4fjpmk9m4i0v7q2yvja73sni6976g9ca"; depends=[MeSHDbi]; }; - MeSH_Eco_IAI1_eg_db = derive2 { name="MeSH.Eco.IAI1.eg.db"; version="1.4.0"; sha256="16mxh182ij25qgfk14dzzpvaac7fqcnzx58j5m6hfrz3wvgh9jrq"; depends=[MeSHDbi]; }; - MeSH_Eco_IAI39_eg_db = derive2 { name="MeSH.Eco.IAI39.eg.db"; version="1.7.0"; sha256="1ahln8fad45mvrg6scdaz1ilvj9wnb5mxww9jvzm33d1ik04j5sj"; depends=[MeSHDbi]; }; - MeSH_Eco_K12_DH10B_eg_db = derive2 { name="MeSH.Eco.K12.DH10B.eg.db"; version="1.4.0"; sha256="00y5qlqrsjl941iaqln4m5jvskc2a6kildys881ml92f14cmgs07"; depends=[MeSHDbi]; }; - MeSH_Eco_K12_MG1655_eg_db = derive2 { name="MeSH.Eco.K12.MG1655.eg.db"; version="1.7.0"; sha256="0vdb038i7pj7bcnnn3rf22bj3knnx4vj1dpwijivh6w9gxfkqd4p"; depends=[MeSHDbi]; }; - MeSH_Eco_O127_H6_E2348_69_eg_db = derive2 { name="MeSH.Eco.O127.H6.E2348.69.eg.db"; version="1.4.0"; sha256="1as23bz0yylgf24sy84xm46bblvkacp84kjr2g8c9if1vll2x2dg"; depends=[MeSHDbi]; }; - MeSH_Eco_O157_H7_EDL933_eg_db = derive2 { name="MeSH.Eco.O157.H7.EDL933.eg.db"; version="1.4.0"; sha256="0qnnp2a2v3nv1br1lg2km0p96q1knwa1fx95cg4wp38nc5g0jcc9"; depends=[MeSHDbi]; }; - MeSH_Eco_O157_H7_Sakai_eg_db = derive2 { name="MeSH.Eco.O157.H7.Sakai.eg.db"; version="1.7.0"; sha256="02j5gi0199z9g6ghc4rsq7h9b5sigrq1a06hhl7rdm4bpa2sy8p1"; depends=[MeSHDbi]; }; - MeSH_Eco_S88_eg_db = derive2 { name="MeSH.Eco.S88.eg.db"; version="1.4.0"; sha256="15k44ricv7vi7sbw5s2nckm6jwbfzrrjp8ck06ydjp9q70hfzmhy"; depends=[MeSHDbi]; }; - MeSH_Eco_UMN026_eg_db = derive2 { name="MeSH.Eco.UMN026.eg.db"; version="1.7.0"; sha256="0nv4w38w9s53jqv3zin3m61skl2gr27iizhqvrp961wy5kqyqwmj"; depends=[MeSHDbi]; }; - MeSH_Eqc_eg_db = derive2 { name="MeSH.Eqc.eg.db"; version="1.7.0"; sha256="1kdv46yjw9dw1ksw1f59gn51gl1vkp8xgk1bwl7fjk9ap7pgc924"; depends=[MeSHDbi]; }; - MeSH_Gga_eg_db = derive2 { name="MeSH.Gga.eg.db"; version="1.7.0"; sha256="07ng6pri1666sv9hznxx8whk8wkj8mm969w3dlgi633fp9qsg507"; depends=[MeSHDbi]; }; - MeSH_Gma_eg_db = derive2 { name="MeSH.Gma.eg.db"; version="1.7.0"; sha256="0sb4nab0fibbhms8h8izwxzdwdg450klnlnczksjka5rccl8na7l"; depends=[MeSHDbi]; }; - MeSH_Hsa_eg_db = derive2 { name="MeSH.Hsa.eg.db"; version="1.7.0"; sha256="02mchzw2jc615g7xd9gb42vsjjyfpz8i6p36mrd0y4nr7mskxmr0"; depends=[MeSHDbi]; }; - MeSH_Laf_eg_db = derive2 { name="MeSH.Laf.eg.db"; version="1.7.0"; sha256="10sl8qisbf8m49j2fvwbwhhp2w964gfnm8j273sy6ma1rdcj1df0"; depends=[MeSHDbi]; }; - MeSH_Lma_eg_db = derive2 { name="MeSH.Lma.eg.db"; version="1.7.0"; sha256="195g835jsswc9v1c0ycp4s1rgcfnwbramgk9vfrlwwiqis7yw358"; depends=[MeSHDbi]; }; - MeSH_Mdo_eg_db = derive2 { name="MeSH.Mdo.eg.db"; version="1.7.0"; sha256="162rg0y1x1nr61vdzdv51ps4ilvybw6z2899xcchbvvpdgd2cxbz"; depends=[MeSHDbi]; }; - MeSH_Mes_eg_db = derive2 { name="MeSH.Mes.eg.db"; version="1.7.0"; sha256="1mj2p780nf8wnid2c2gkjrsbhrm8jyng03wa0wy83hs0gi38zp8k"; depends=[MeSHDbi]; }; - MeSH_Mga_eg_db = derive2 { name="MeSH.Mga.eg.db"; version="1.7.0"; sha256="076wrm9g3ppijpsq7ggcl3ld9nrm0vh87g5wspc760fjd0xy2pgn"; depends=[MeSHDbi]; }; - MeSH_Miy_eg_db = derive2 { name="MeSH.Miy.eg.db"; version="1.7.0"; sha256="0nzm1rl1qf2impsjns3cbp45kl4ld1a8icb3ip85r2hg2js85ifa"; depends=[MeSHDbi]; }; - MeSH_Mml_eg_db = derive2 { name="MeSH.Mml.eg.db"; version="1.7.0"; sha256="0v30ia3wdicx38a4qaqafz5xblvdhpwzlxxdxka941v364dqvjvi"; depends=[MeSHDbi]; }; - MeSH_Mmu_eg_db = derive2 { name="MeSH.Mmu.eg.db"; version="1.7.0"; sha256="0j7l3w697jbf8wx2shnvs5hirpck0cwa7ik298gsjm9d5hwmjkwa"; depends=[MeSHDbi]; }; - MeSH_Mtr_eg_db = derive2 { name="MeSH.Mtr.eg.db"; version="1.7.0"; sha256="0nssphb6qs81i0hay1lmyvvvsj055rxwr21p46x4zlrqy01m9qxq"; depends=[MeSHDbi]; }; - MeSH_Nle_eg_db = derive2 { name="MeSH.Nle.eg.db"; version="1.7.0"; sha256="0pn9hhs4h9i49kw64xc4rb25gfvrn72swncvhw33pbw5kdav3mmi"; depends=[MeSHDbi]; }; - MeSH_Oan_eg_db = derive2 { name="MeSH.Oan.eg.db"; version="1.7.0"; sha256="1mw04y6vdma7q8i456qbjga4ikswsrbg4r7l9k9dyq37rh53fqhj"; depends=[MeSHDbi]; }; - MeSH_Ocu_eg_db = derive2 { name="MeSH.Ocu.eg.db"; version="1.7.0"; sha256="16b5wgr5wfhrv64za39k9kkqg1drscvnf1s98jw7inrlk3hc7cx3"; depends=[MeSHDbi]; }; - MeSH_Oni_eg_db = derive2 { name="MeSH.Oni.eg.db"; version="1.7.0"; sha256="0g2czpb0d47yrq161fzvkmra5gmv7vqjllrhxd6v8vc65kmjkcjb"; depends=[MeSHDbi]; }; - MeSH_Osa_eg_db = derive2 { name="MeSH.Osa.eg.db"; version="1.7.0"; sha256="15k2ymcn65hwjmp47azf7wn7b8d1mb8g6b9wxrpv2jw7cazr14j2"; depends=[MeSHDbi]; }; - MeSH_PCR_db = derive2 { name="MeSH.PCR.db"; version="1.7.0"; sha256="04yw89mswnpi52hz1fa4y0ds5lykhwbwlgf52fyjhcbjw43ldais"; depends=[MeSHDbi]; }; - MeSH_Pab_eg_db = derive2 { name="MeSH.Pab.eg.db"; version="1.7.0"; sha256="09g0cgcbgyj59irvifqzbym9pyij3g4sqk95njd6xnlq57rw1awi"; depends=[MeSHDbi]; }; - MeSH_Pae_PAO1_eg_db = derive2 { name="MeSH.Pae.PAO1.eg.db"; version="1.7.0"; sha256="09yrm1skqvbs6jfn5a6s2ky7ij2b5nvs0p3vbjcv3pfh60n0zxdl"; depends=[MeSHDbi]; }; - MeSH_Pfa_3D7_eg_db = derive2 { name="MeSH.Pfa.3D7.eg.db"; version="1.7.0"; sha256="0h4g20ndpbrasaxml6in3wff6ckl5dy3h7wli9zamvrljzh0qdza"; depends=[MeSHDbi]; }; - MeSH_Pto_eg_db = derive2 { name="MeSH.Pto.eg.db"; version="1.7.0"; sha256="1ny0pqj05rz005fhi3nawixk0rj0jdnyd737359vbph79s82h4n5"; depends=[MeSHDbi]; }; - MeSH_Ptr_eg_db = derive2 { name="MeSH.Ptr.eg.db"; version="1.7.0"; sha256="0p62h8i0fx5vxac0xk54laibgsgmnpavpi5d6brjrddvxa4yqvx7"; depends=[MeSHDbi]; }; - MeSH_Rno_eg_db = derive2 { name="MeSH.Rno.eg.db"; version="1.7.0"; sha256="10f6kxzdgpidig3jc8wfgkan5yx1c8brxnf6w2y62ba3nq5nhj1j"; depends=[MeSHDbi]; }; - MeSH_Sau_USA300TCH1516_eg_db = derive2 { name="MeSH.Sau.USA300TCH1516.eg.db"; version="1.4.0"; sha256="109kvsdqvra8x392l82djbd46l8z4hv4z92785ivgdcnchsdjq7p"; depends=[MeSHDbi]; }; - MeSH_Sce_S288c_eg_db = derive2 { name="MeSH.Sce.S288c.eg.db"; version="1.7.0"; sha256="09df9issnh9adhwb5z6rxzll8d8gqpvg812p0xny7zx598hvjbyh"; depends=[MeSHDbi]; }; - MeSH_Sco_A32_eg_db = derive2 { name="MeSH.Sco.A32.eg.db"; version="1.7.0"; sha256="047v0h1jrxacw33hd2iclrwzi441s60aq107ynzh549066r44l26"; depends=[MeSHDbi]; }; - MeSH_Sil_eg_db = derive2 { name="MeSH.Sil.eg.db"; version="1.7.0"; sha256="19a6sq9yzc7q7515x7wxjdr74r3xxagfinzwgxvb13j2pcxl72qr"; depends=[MeSHDbi]; }; - MeSH_Spo_972h_eg_db = derive2 { name="MeSH.Spo.972h.eg.db"; version="1.7.0"; sha256="01m12jm4wwkdh9zkajl1fh9193pkys23m33q0zxahvqaknainv3b"; depends=[MeSHDbi]; }; - MeSH_Spu_eg_db = derive2 { name="MeSH.Spu.eg.db"; version="1.7.0"; sha256="08991vxjyqxybi91msicrxdxi60js6gynnhkxdybhcdn0rq3q03b"; depends=[MeSHDbi]; }; - MeSH_Ssc_eg_db = derive2 { name="MeSH.Ssc.eg.db"; version="1.7.0"; sha256="188jk2yx2xkyd9nr55jx0w2ki6fk5a10hc39zzs8c7ilb6azj973"; depends=[MeSHDbi]; }; - MeSH_Syn_eg_db = derive2 { name="MeSH.Syn.eg.db"; version="1.7.0"; sha256="0csch7hs1hvabrhpvm8hwv35iqhllisf3xr9j5b3lhysdxm9awha"; depends=[MeSHDbi]; }; - MeSH_Tbr_9274_eg_db = derive2 { name="MeSH.Tbr.9274.eg.db"; version="1.7.0"; sha256="1qr5d4zf6778bqrmxynjzl0hjvfgfbk42wldw6c40cqa51caav5x"; depends=[MeSHDbi]; }; - MeSH_Tgo_ME49_eg_db = derive2 { name="MeSH.Tgo.ME49.eg.db"; version="1.7.0"; sha256="1cwb68y7sn8gnhwcm05dry9aaq2jjphvwfnl5yh0fddw7x31nsc6"; depends=[MeSHDbi]; }; - MeSH_Tgu_eg_db = derive2 { name="MeSH.Tgu.eg.db"; version="1.7.0"; sha256="0dbpxc3syrw5s59cwl36skzi9d5j557aacq0j5kcwahy8abb1pk9"; depends=[MeSHDbi]; }; - MeSH_Vvi_eg_db = derive2 { name="MeSH.Vvi.eg.db"; version="1.7.0"; sha256="06fckdyfrwdh3ijz6bcikr4fsd69adlcjb54brwqqaak14lf06w4"; depends=[MeSHDbi]; }; - MeSH_Xla_eg_db = derive2 { name="MeSH.Xla.eg.db"; version="1.7.0"; sha256="1wxh3lhbc8cy040dhkwjckxc2q6laxb8wrvzd1lg72vijzsnyvlg"; depends=[MeSHDbi]; }; - MeSH_Xtr_eg_db = derive2 { name="MeSH.Xtr.eg.db"; version="1.7.0"; sha256="1fz9l962w0mi8a6ch54xa4qn5v7kkva21n7q68yd4d4irm51dcac"; depends=[MeSHDbi]; }; - MeSH_Zma_eg_db = derive2 { name="MeSH.Zma.eg.db"; version="1.7.0"; sha256="0pfx33qs6m5m5i85ib8agbdg58w8g0af188rl0jdyxrfkbfaj9v9"; depends=[MeSHDbi]; }; - MeSH_db = derive2 { name="MeSH.db"; version="1.7.0"; sha256="0zinr1wbbw3q05zcaq5xaqn0gqx9z9rdhdc89g1pj6f13mhs7zz3"; depends=[MeSHDbi]; }; + MafDb_1Kgenomes_phase1_hs37d5 = derive2 { name="MafDb.1Kgenomes.phase1.hs37d5"; version="3.6.0"; sha256="19y1w2nk3xj4xkg46vhmfk045j8cg81x9a27irmgl2ym3pmcpn92"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_1Kgenomes_phase3_hs37d5 = derive2 { name="MafDb.1Kgenomes.phase3.hs37d5"; version="3.6.0"; sha256="02bwgqh4mx9yfsyr6cxglncdybkxq9rc0gir3919sjs2my3pa0yq"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_ESP6500SI_V2_SSA137_GRCh38 = derive2 { name="MafDb.ESP6500SI.V2.SSA137.GRCh38"; version="3.6.0"; sha256="07spwx7akc7i82s8il6mjkmyll07v2slkv6h6fy1rrsa0hrdrw8w"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_ESP6500SI_V2_SSA137_hs37d5 = derive2 { name="MafDb.ESP6500SI.V2.SSA137.hs37d5"; version="3.6.0"; sha256="1gr9gh355h1n426rwsr44wk4fgy0bvjfyaai2jj0qnp9zb94kr42"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_ExAC_r1_0_hs37d5 = derive2 { name="MafDb.ExAC.r1.0.hs37d5"; version="3.6.0"; sha256="1a2x86cdl6q3s9phb6dzblld4y43r10gh7323c5jnwiyirhs4hlc"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_ExAC_r1_0_nonTCGA_hs37d5 = derive2 { name="MafDb.ExAC.r1.0.nonTCGA.hs37d5"; version="3.6.0"; sha256="1zyp1hsqdcspnvlnqm3wp9xly8r6kjbglbdqsc8fxllivdzxs15f"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_TOPMed_freeze5_hg38 = derive2 { name="MafDb.TOPMed.freeze5.hg38"; version="3.6.0"; sha256="02hq5agpbqcc5cva6xa37kniwi0fi7h5d4cbpmlwfc502n0ahlx0"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_gnomAD_r2_0_1_hs37d5 = derive2 { name="MafDb.gnomAD.r2.0.1.hs37d5"; version="3.6.0"; sha256="0fjpm1lf8qz5vfd4k2sd50a0nkxx8jlf31c1xp87a2d5v7gyx9d4"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_gnomADex_r2_0_1_hs37d5 = derive2 { name="MafDb.gnomADex.r2.0.1.hs37d5"; version="3.6.0"; sha256="1jrzj9mw8xqxmw4qq9djs1f5slvd5l7151pcg9bqzj0162zcz8jb"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; }; + MeSH_AOR_db = derive2 { name="MeSH.AOR.db"; version="1.9.0"; sha256="0vlvfwr9bi229xwdjymclj0z2spxx8q96hpkgvqyndfpqchapl5q"; depends=[MeSHDbi]; }; + MeSH_Aca_eg_db = derive2 { name="MeSH.Aca.eg.db"; version="1.9.0"; sha256="1cx2yzx67fgqi0kmf1mk3ykvmqmprilxrjg6l51srjhi40p9q1wg"; depends=[MeSHDbi]; }; + MeSH_Aga_PEST_eg_db = derive2 { name="MeSH.Aga.PEST.eg.db"; version="1.9.0"; sha256="1gy4l1p0980blf91f57sxnn38gfyq99lmy3sfc141nm435abdh2l"; depends=[MeSHDbi]; }; + MeSH_Ame_eg_db = derive2 { name="MeSH.Ame.eg.db"; version="1.9.0"; sha256="1z2y8mdjyjclf0lqlhi9dq9gq8cqrm8m2m0rnyqgbadsxviwg447"; depends=[MeSHDbi]; }; + MeSH_Aml_eg_db = derive2 { name="MeSH.Aml.eg.db"; version="1.9.0"; sha256="15393b8pyh8xclbi43q3iv6lvza7az7zyc2zcmj2wnqx8x9nn50p"; depends=[MeSHDbi]; }; + MeSH_Ana_eg_db = derive2 { name="MeSH.Ana.eg.db"; version="1.9.0"; sha256="0r1q383f5p92f238m7w0gxalfr8w638ij4dj8zm1b20qakwb8bk6"; depends=[MeSHDbi]; }; + MeSH_Ani_FGSC_eg_db = derive2 { name="MeSH.Ani.FGSC.eg.db"; version="1.9.0"; sha256="1fv6hfqx562qiy87h7bjym72ffygfgdfx0miwbnwd1wblbrs4m23"; depends=[MeSHDbi]; }; + MeSH_Ath_eg_db = derive2 { name="MeSH.Ath.eg.db"; version="1.9.0"; sha256="0m78hqfcpnfbq7dm28l24ckhz91sbq3mgi0qdkn6l69rg19l5xwr"; depends=[MeSHDbi]; }; + MeSH_Bfl_eg_db = derive2 { name="MeSH.Bfl.eg.db"; version="1.9.0"; sha256="1s180b36nz4g7w2c49c4dddz4362ps45fjbs8q07s8d5r826wil0"; depends=[MeSHDbi]; }; + MeSH_Bsu_168_eg_db = derive2 { name="MeSH.Bsu.168.eg.db"; version="1.9.0"; sha256="0s0bskw9y5gbf80xf7sh43csa8mwi0h4ka2dai6jm763jdal645s"; depends=[MeSHDbi]; }; + MeSH_Bta_eg_db = derive2 { name="MeSH.Bta.eg.db"; version="1.9.0"; sha256="1nfy0fa7jnlsq823jq1im6zimnanqx6hc4z9sa2mhpn8yw3hrzcy"; depends=[MeSHDbi]; }; + MeSH_Cal_SC5314_eg_db = derive2 { name="MeSH.Cal.SC5314.eg.db"; version="1.9.0"; sha256="111q80xyfnz9p8230wnm0xkam2p25drbcb2nyr68lpz3l02m9c72"; depends=[MeSHDbi]; }; + MeSH_Cbr_eg_db = derive2 { name="MeSH.Cbr.eg.db"; version="1.9.0"; sha256="0xpm52xshhjw0lazfz9zhk3wiqas88aabin58iqykbyivnaxgiw8"; depends=[MeSHDbi]; }; + MeSH_Cel_eg_db = derive2 { name="MeSH.Cel.eg.db"; version="1.9.0"; sha256="1ni1w608mr28fapxhxj5icf1yjq6wrnqfhxc8bf5q5qqpnb34k16"; depends=[MeSHDbi]; }; + MeSH_Cfa_eg_db = derive2 { name="MeSH.Cfa.eg.db"; version="1.9.0"; sha256="0c1rxpsavj4j9sndr2bigyxsdg7hm3ckbk2rai2gz125vwlfy9ll"; depends=[MeSHDbi]; }; + MeSH_Cin_eg_db = derive2 { name="MeSH.Cin.eg.db"; version="1.9.0"; sha256="10zxx8hpd72dad1ais9qr1ahkrqygmrzj2zph8n7zwvcys3mqqqg"; depends=[MeSHDbi]; }; + MeSH_Cja_eg_db = derive2 { name="MeSH.Cja.eg.db"; version="1.9.0"; sha256="0g8dafmjls4lafbg3a484iym0df173szvnzfqz272sh32a69ikgb"; depends=[MeSHDbi]; }; + MeSH_Cpo_eg_db = derive2 { name="MeSH.Cpo.eg.db"; version="1.9.0"; sha256="0r4yrxflppzf21zfiyq1hxsjjgm7a3akj18qly8576nl94py0h16"; depends=[MeSHDbi]; }; + MeSH_Cre_eg_db = derive2 { name="MeSH.Cre.eg.db"; version="1.9.0"; sha256="1aicx7f7mpawq9mbrdkpach2n8yz2isqfqxcqx355js8csdnai6y"; depends=[MeSHDbi]; }; + MeSH_Dan_eg_db = derive2 { name="MeSH.Dan.eg.db"; version="1.9.0"; sha256="1d829frcmx9h0yn4dk2ddhqjjf4kz6n0c8nag31n5viaj0jrxhz9"; depends=[MeSHDbi]; }; + MeSH_Dda_3937_eg_db = derive2 { name="MeSH.Dda.3937.eg.db"; version="1.9.0"; sha256="0zx7s0xbqxl2xs1xhv5q3ppr33zfyjs4c5cmfp904k21fp1gyxk0"; depends=[MeSHDbi]; }; + MeSH_Ddi_AX4_eg_db = derive2 { name="MeSH.Ddi.AX4.eg.db"; version="1.9.0"; sha256="1sahvwvh29m2icqi3l4ain817cmlajklmc6w32ay5ydbxdl2k2aq"; depends=[MeSHDbi]; }; + MeSH_Der_eg_db = derive2 { name="MeSH.Der.eg.db"; version="1.9.0"; sha256="0g8z6cdz5wad9fhzd0f7p7961kjv1icfwxfskgimrb0dqn0vwngz"; depends=[MeSHDbi]; }; + MeSH_Dgr_eg_db = derive2 { name="MeSH.Dgr.eg.db"; version="1.9.0"; sha256="1g68dv597h62kidkaxmyj67jpz49aklr77hf0zy0n556whb0gjw0"; depends=[MeSHDbi]; }; + MeSH_Dme_eg_db = derive2 { name="MeSH.Dme.eg.db"; version="1.9.0"; sha256="18r1mfmszsypp6iwdfcdlxzbz2ym53q160y5740d20nf18jwdkyl"; depends=[MeSHDbi]; }; + MeSH_Dmo_eg_db = derive2 { name="MeSH.Dmo.eg.db"; version="1.9.0"; sha256="09r83x7c3ascv5k10izbsybbchng578f88cqcc34a71h01ccvbgl"; depends=[MeSHDbi]; }; + MeSH_Dpe_eg_db = derive2 { name="MeSH.Dpe.eg.db"; version="1.9.0"; sha256="0c6yi84drl1kp270ifhkha6s5555pmx122r3zsh5lqip4pf36ik0"; depends=[MeSHDbi]; }; + MeSH_Dre_eg_db = derive2 { name="MeSH.Dre.eg.db"; version="1.9.0"; sha256="0za05dgsy67sl1rg827mn4iir2fcwqgnmmifppdkmg5bcqvh3sli"; depends=[MeSHDbi]; }; + MeSH_Dse_eg_db = derive2 { name="MeSH.Dse.eg.db"; version="1.9.0"; sha256="1m8vszsdql5vnbavrdazrf0d88nq8c08bz9fggr1799fmh9ivppi"; depends=[MeSHDbi]; }; + MeSH_Dsi_eg_db = derive2 { name="MeSH.Dsi.eg.db"; version="1.9.0"; sha256="1sjm22yl4a9lwv6j5hhs16zs39fv9xvaga2bgb55rv6i1zbw514v"; depends=[MeSHDbi]; }; + MeSH_Dvi_eg_db = derive2 { name="MeSH.Dvi.eg.db"; version="1.9.0"; sha256="0lll6xsxccxg04nnbchkq3rskzqj70czky27yhn99dpnb7cl2gpk"; depends=[MeSHDbi]; }; + MeSH_Dya_eg_db = derive2 { name="MeSH.Dya.eg.db"; version="1.9.0"; sha256="0fny3nxwpihh505h54b82bf22p74xhf89xns9n7wgsg6j7zr1q49"; depends=[MeSHDbi]; }; + MeSH_Eco_55989_eg_db = derive2 { name="MeSH.Eco.55989.eg.db"; version="1.9.0"; sha256="0jklkvqwajnprs951ws5fxjxkx1dqmi7nldb854wciyanya7srbz"; depends=[MeSHDbi]; }; + MeSH_Eco_ED1a_eg_db = derive2 { name="MeSH.Eco.ED1a.eg.db"; version="1.9.0"; sha256="0gmjpbqcrg700fi4qgg9cxny8rwclpg9sbrg2yqpnpiwfp3m1xp9"; depends=[MeSHDbi]; }; + MeSH_Eco_IAI39_eg_db = derive2 { name="MeSH.Eco.IAI39.eg.db"; version="1.9.0"; sha256="126xn0dgw08xdjw0sqm80v3pwqlmjzarifq1s3s81qkd814pij2y"; depends=[MeSHDbi]; }; + MeSH_Eco_K12_MG1655_eg_db = derive2 { name="MeSH.Eco.K12.MG1655.eg.db"; version="1.9.0"; sha256="1zfq3h886x9kyislnl4mj6ksfmr4slmayw2f63wp3vhlqc8xlp6m"; depends=[MeSHDbi]; }; + MeSH_Eco_O157_H7_Sakai_eg_db = derive2 { name="MeSH.Eco.O157.H7.Sakai.eg.db"; version="1.9.0"; sha256="18n2aajv2m1s3y13w88jnxiwzmmqiplmp2la1fh6f34ywsc8vcf2"; depends=[MeSHDbi]; }; + MeSH_Eco_UMN026_eg_db = derive2 { name="MeSH.Eco.UMN026.eg.db"; version="1.9.0"; sha256="1qhw2zbldsxr9mii73n5l2l3xgnnmfcdm5zlnj8q6maz0rg8npvc"; depends=[MeSHDbi]; }; + MeSH_Eqc_eg_db = derive2 { name="MeSH.Eqc.eg.db"; version="1.9.0"; sha256="0siyszvzgy61f44mk6hgg215jin92i1bpyld932f3ydkb2cg1vii"; depends=[MeSHDbi]; }; + MeSH_Gga_eg_db = derive2 { name="MeSH.Gga.eg.db"; version="1.9.0"; sha256="1r5ighzpbw3rbi9pv75xgdxz34yl7d4nimc3423fva6m25bl14f1"; depends=[MeSHDbi]; }; + MeSH_Gma_eg_db = derive2 { name="MeSH.Gma.eg.db"; version="1.9.0"; sha256="0m3f9vkl97drciv68qvb6b1zxg4376sgrxd5fn7r8v6jnk3764h6"; depends=[MeSHDbi]; }; + MeSH_Hsa_eg_db = derive2 { name="MeSH.Hsa.eg.db"; version="1.9.0"; sha256="0kbf04jgy9sdq99x7c3j6fk1d1p746sm5h0wgcc496hmj9f3d7xq"; depends=[MeSHDbi]; }; + MeSH_Laf_eg_db = derive2 { name="MeSH.Laf.eg.db"; version="1.9.0"; sha256="1s96nh30gg3q6agvd75h8wkmsna753wlhh79fb563plkhynila3j"; depends=[MeSHDbi]; }; + MeSH_Lma_eg_db = derive2 { name="MeSH.Lma.eg.db"; version="1.9.0"; sha256="0f49mvvrigq06m6wsf2bn5b2k06c5azfnzks8z8h91h7p1cdn239"; depends=[MeSHDbi]; }; + MeSH_Mdo_eg_db = derive2 { name="MeSH.Mdo.eg.db"; version="1.9.0"; sha256="1nlqqgwcaic49lr7qknm4fnr28iy5a5g8pln9ay5c94d82ihaanj"; depends=[MeSHDbi]; }; + MeSH_Mes_eg_db = derive2 { name="MeSH.Mes.eg.db"; version="1.9.0"; sha256="0s8hfixk8axy155rhv9frnvdannm7fwv8xbnn4yqrqz97s0w3l8x"; depends=[MeSHDbi]; }; + MeSH_Mga_eg_db = derive2 { name="MeSH.Mga.eg.db"; version="1.9.0"; sha256="0kc1zv1rlw6sg72z5if2ljyyb99nn9jj67z0x77zpjil15igjq0f"; depends=[MeSHDbi]; }; + MeSH_Miy_eg_db = derive2 { name="MeSH.Miy.eg.db"; version="1.9.0"; sha256="07n81wg4g7r554xs4ziv637mz22ycmn5h03v2a1bl4gfagmp2wga"; depends=[MeSHDbi]; }; + MeSH_Mml_eg_db = derive2 { name="MeSH.Mml.eg.db"; version="1.9.0"; sha256="1sss6f5c039vic2kbxf5zchxx6qqdpysbwfb04xqn7vb0h5xs9aa"; depends=[MeSHDbi]; }; + MeSH_Mmu_eg_db = derive2 { name="MeSH.Mmu.eg.db"; version="1.9.0"; sha256="1lmy5rqpsxrmcc1zshj2dygdyrw5i95bmp9d31686h2pf7rxjxa7"; depends=[MeSHDbi]; }; + MeSH_Mtr_eg_db = derive2 { name="MeSH.Mtr.eg.db"; version="1.9.0"; sha256="1j892b88xpf1lcz6lv7n0b2lmqda3j6na6lm18qrmnydvihsrglz"; depends=[MeSHDbi]; }; + MeSH_Nle_eg_db = derive2 { name="MeSH.Nle.eg.db"; version="1.9.0"; sha256="0mnyhj6cfzgar0rsfzza9vydh3kiimyix732zm80gsj7xq844hs4"; depends=[MeSHDbi]; }; + MeSH_Oan_eg_db = derive2 { name="MeSH.Oan.eg.db"; version="1.9.0"; sha256="1gmlg22jdspcv6056iax16hk6vry739s7px1c0vpgmsblj8blzjv"; depends=[MeSHDbi]; }; + MeSH_Ocu_eg_db = derive2 { name="MeSH.Ocu.eg.db"; version="1.9.0"; sha256="05qsamqm7dimvghka10z03shchx08gxaf7bv488djia9msw04l3w"; depends=[MeSHDbi]; }; + MeSH_Oni_eg_db = derive2 { name="MeSH.Oni.eg.db"; version="1.9.0"; sha256="0h0027wgxm5ngk7087hcw1n2xx04q0sgfcpgmv2wn3f88mh42r9l"; depends=[MeSHDbi]; }; + MeSH_Osa_eg_db = derive2 { name="MeSH.Osa.eg.db"; version="1.9.0"; sha256="1cgbalyamgf1aj48ndhby8x3mzdwn8aiv9nrh8mpyz9zssl0ywdm"; depends=[MeSHDbi]; }; + MeSH_PCR_db = derive2 { name="MeSH.PCR.db"; version="1.9.0"; sha256="0wwnjqc0rvymh9fzh8l9hnlmaymchp54v9fqavxl3cwr2jjyyxis"; depends=[MeSHDbi]; }; + MeSH_Pab_eg_db = derive2 { name="MeSH.Pab.eg.db"; version="1.9.0"; sha256="0s869r4pz02d9k4dcg7qxy75h44x6lli8hxm3f9fjmmvv6cv18zs"; depends=[MeSHDbi]; }; + MeSH_Pae_PAO1_eg_db = derive2 { name="MeSH.Pae.PAO1.eg.db"; version="1.9.0"; sha256="07krh3k6d1q9dadphs07sapyv3dfmlhdmgcfrrramixx7paqqd1a"; depends=[MeSHDbi]; }; + MeSH_Pfa_3D7_eg_db = derive2 { name="MeSH.Pfa.3D7.eg.db"; version="1.9.0"; sha256="03bs083cvgd5gwy0n2hqq08r8fzw426a4fjx7yg9ypp6316bp03b"; depends=[MeSHDbi]; }; + MeSH_Pto_eg_db = derive2 { name="MeSH.Pto.eg.db"; version="1.9.0"; sha256="0snydy5c7y0437qndc7ki3nswbr3jfj2fssdiqa3yfrbd4dgl8fs"; depends=[MeSHDbi]; }; + MeSH_Ptr_eg_db = derive2 { name="MeSH.Ptr.eg.db"; version="1.9.0"; sha256="1g6q20hk4v2kwjj9shrwyrf068qv8zrz4dlv58id1im0h6kzi1bq"; depends=[MeSHDbi]; }; + MeSH_Rno_eg_db = derive2 { name="MeSH.Rno.eg.db"; version="1.9.0"; sha256="0wdwy7jqy47flyk25fv51l2acg7lisf240sli9snf0hl4rg2m8sh"; depends=[MeSHDbi]; }; + MeSH_Sce_S288c_eg_db = derive2 { name="MeSH.Sce.S288c.eg.db"; version="1.9.0"; sha256="193amf74qwglzdpgc4b9f2g0jxs2s5ilfwzk5gpzzsyr6z19m8sx"; depends=[MeSHDbi]; }; + MeSH_Sco_A32_eg_db = derive2 { name="MeSH.Sco.A32.eg.db"; version="1.9.0"; sha256="1wpl49hsz2la272mp836cgqnncyddknrfbfalikwrbydcpdflmqj"; depends=[MeSHDbi]; }; + MeSH_Sil_eg_db = derive2 { name="MeSH.Sil.eg.db"; version="1.9.0"; sha256="0x1s4qs17sy7pz1bhlgfzgvixf50h4wcpa885600f5jv80piz10w"; depends=[MeSHDbi]; }; + MeSH_Spo_972h_eg_db = derive2 { name="MeSH.Spo.972h.eg.db"; version="1.9.0"; sha256="0959hmphr884az46y6zvsmi28vsz66y3jf09f2hki6cwg7gp28l2"; depends=[MeSHDbi]; }; + MeSH_Spu_eg_db = derive2 { name="MeSH.Spu.eg.db"; version="1.9.0"; sha256="1fdwj5dpfpm8cbq5i1wk3n5qq0ygw876shpxiqlj7i7a8yrnikqg"; depends=[MeSHDbi]; }; + MeSH_Ssc_eg_db = derive2 { name="MeSH.Ssc.eg.db"; version="1.9.0"; sha256="1mrmxpi4zkj77qnr5gsx7nnmhz3h7w07mji0khahd1cnkdqb455g"; depends=[MeSHDbi]; }; + MeSH_Syn_eg_db = derive2 { name="MeSH.Syn.eg.db"; version="1.9.0"; sha256="04wrimmnwhzqhk88jp059h5wpj0wh35ilgzfmn7m66igbiywsyiq"; depends=[MeSHDbi]; }; + MeSH_Tbr_9274_eg_db = derive2 { name="MeSH.Tbr.9274.eg.db"; version="1.9.0"; sha256="1wida7bmggiamd8bw7sx3sc84rjhpa6c7kgbz7ppf5z5zzabxwj8"; depends=[MeSHDbi]; }; + MeSH_Tgo_ME49_eg_db = derive2 { name="MeSH.Tgo.ME49.eg.db"; version="1.9.0"; sha256="0s7792dcgh5ilanr4nnkfcf95j4yndsncr63ybw8g5kp14qw3b6i"; depends=[MeSHDbi]; }; + MeSH_Tgu_eg_db = derive2 { name="MeSH.Tgu.eg.db"; version="1.9.0"; sha256="19g80bjw7h0f4w3mlrj56xmsdf46bjvs2bykf7hbz911qblkmd08"; depends=[MeSHDbi]; }; + MeSH_Vvi_eg_db = derive2 { name="MeSH.Vvi.eg.db"; version="1.9.0"; sha256="0x5amvf092r97zkzivsks99q4iaw9cnwpk2mjq8qjfrj2fg9mghc"; depends=[MeSHDbi]; }; + MeSH_Xla_eg_db = derive2 { name="MeSH.Xla.eg.db"; version="1.9.0"; sha256="0h2kndx4xva57hhapzkwnk4by05vpcrgqakc5cpil11in9wwm4gw"; depends=[MeSHDbi]; }; + MeSH_Xtr_eg_db = derive2 { name="MeSH.Xtr.eg.db"; version="1.9.0"; sha256="11gssp2rm9jln3bhallxhscn1vlp62yv1dqsshswzhda230pwsk8"; depends=[MeSHDbi]; }; + MeSH_Zma_eg_db = derive2 { name="MeSH.Zma.eg.db"; version="1.9.0"; sha256="1pn4v8hp2g9i6d0wn7yj28fg6nfrlxi2zw7svmqlqf0n15sj4g91"; depends=[MeSHDbi]; }; + MeSH_db = derive2 { name="MeSH.db"; version="1.9.0"; sha256="1vljxgv6x7417sash10mjmwdqs6xmqhwxdsf5n8nn3bw283k0jkv"; depends=[MeSHDbi]; }; MmAgilentDesign026655_db = derive2 { name="MmAgilentDesign026655.db"; version="3.2.3"; sha256="00d0yjcb5id7zacx4bzdwy4q6f4qvnnx8ph4d4xz1fmcbspz2qiz"; depends=[AnnotationDbi org_Mm_eg_db]; }; MoExExonProbesetLocation = derive2 { name="MoExExonProbesetLocation"; version="1.15.0"; sha256="0bvj3bji4bwwmxjz4b57n1aqypdibdmry30rfwmlxss1hav96sl7"; depends=[AnnotationDbi]; }; Mu15v1_db = derive2 { name="Mu15v1.db"; version="3.2.3"; sha256="0qchqkbx6ybijab8qhflxj33kwksfll1d3d3917vydjac9fzw1lz"; depends=[AnnotationDbi org_Mm_eg_db]; }; @@ -233,8 +230,8 @@ in with self; { Mus_musculus = derive2 { name="Mus.musculus"; version="1.3.1"; sha256="143zdf83gbfqhy8jm9df7gzhw5q3a64jrjrxrzjf0zd76j8s8j6y"; depends=[AnnotationDbi GenomicFeatures GO_db org_Mm_eg_db OrganismDbi TxDb_Mmusculus_UCSC_mm10_knownGene]; }; Norway981_db = derive2 { name="Norway981.db"; version="3.2.3"; sha256="04ngc2hilqi9m7933mnm7jcvkxlz68vqqh5b628db575vcxql9b9"; depends=[AnnotationDbi org_Hs_eg_db]; }; OperonHumanV3_db = derive2 { name="OperonHumanV3.db"; version="3.2.3"; sha256="082gff88cwk2p50q8g9bixggacaclgqcvk6w5dc11h9fkgvd160i"; depends=[AnnotationDbi org_Hs_eg_db]; }; - PANTHER_db = derive2 { name="PANTHER.db"; version="1.0.3"; sha256="1vsfhradfhk087vzi0jzkd7qab72g0v0x9s1rr7wblw7wjz48299"; depends=[AnnotationDbi RSQLite]; }; - PFAM_db = derive2 { name="PFAM.db"; version="3.4.0"; sha256="1s50z6g6azm9jbxbfq2qlciapm31pv5rsylgpy4p0wsc9dbxh723"; depends=[AnnotationDbi]; }; + PANTHER_db = derive2 { name="PANTHER.db"; version="1.0.4"; sha256="1vl8anixkhcb9axlszk479yaw48bz1hhgmff41nqk8k8w4jkyn1y"; depends=[AnnotationDbi RSQLite]; }; + PFAM_db = derive2 { name="PFAM.db"; version="3.5.0"; sha256="14c85j6ms6cqfifpsihn6ajk6b317gw2b904skv4dqclbgcg6ymx"; depends=[AnnotationDbi]; }; POCRCannotation_db = derive2 { name="POCRCannotation.db"; version="3.2.3"; sha256="0ybvs4hrxpivdkhm0fxpib11vlxqqdk8prlyj78vj5qzyb3iy89d"; depends=[AnnotationDbi org_Hs_eg_db]; }; PartheenMetaData_db = derive2 { name="PartheenMetaData.db"; version="3.2.3"; sha256="0d37c5b7s3fgkkvg7sj7gl9ksrjk5pyyv54vkys8w3qwgsm8yrdz"; depends=[AnnotationDbi org_Hs_eg_db]; }; PolyPhen_Hsapiens_dbSNP131 = derive2 { name="PolyPhen.Hsapiens.dbSNP131"; version="1.0.2"; sha256="1kikygkli41sn3rqihz0924prmqg2264ifj29vmg1a7qccm0kf7c"; depends=[AnnotationDbi RSQLite VariantAnnotation]; }; @@ -247,42 +244,41 @@ in with self; { SHDZ_db = derive2 { name="SHDZ.db"; version="3.2.3"; sha256="077xy2zx3f4c01di18ki32xmrwgsc1qjci3wj33nmgsy5925zdxs"; depends=[AnnotationDbi org_Hs_eg_db]; }; SIFT_Hsapiens_dbSNP132 = derive2 { name="SIFT.Hsapiens.dbSNP132"; version="1.0.2"; sha256="1akqhmv9hp41q2jrvz4xvpdi30c4c6v4xbz6ykn6pdf0217p7xry"; depends=[AnnotationDbi RSQLite VariantAnnotation]; }; SIFT_Hsapiens_dbSNP137 = derive2 { name="SIFT.Hsapiens.dbSNP137"; version="1.0.0"; sha256="1472abqanbwziyynr851xzhg7ck8w1n98ymmggg7s46hzix5mlj8"; depends=[AnnotationDbi RSQLite VariantAnnotation]; }; - SNPlocs_Hsapiens_dbSNP_20090506 = derive2 { name="SNPlocs.Hsapiens.dbSNP.20090506"; version="0.99.9"; sha256="10943wbc56mz8ywcd71ndbdz7h3a9a17mzfdvj237wsgp62arfh6"; depends=[BSgenome GenomicRanges IRanges]; }; - SNPlocs_Hsapiens_dbSNP_20100427 = derive2 { name="SNPlocs.Hsapiens.dbSNP.20100427"; version="0.99.7"; sha256="16m15sqxnczb399bcy7nll804h4955f6w8mag5jlda6h11yh732z"; depends=[GenomicRanges IRanges S4Vectors]; }; SNPlocs_Hsapiens_dbSNP_20101109 = derive2 { name="SNPlocs.Hsapiens.dbSNP.20101109"; version="0.99.7"; sha256="1r1gvx563gv1lidi099yw7lvf8c0983yck9yf8r8iypiz1d4az73"; depends=[GenomicRanges IRanges S4Vectors]; }; - SNPlocs_Hsapiens_dbSNP_20110815 = derive2 { name="SNPlocs.Hsapiens.dbSNP.20110815"; version="0.99.7"; sha256="0nvpa44xy7zb9q63max1q0pmfibh976blmnirryxcca20j41f8ic"; depends=[GenomicRanges IRanges S4Vectors]; }; - SNPlocs_Hsapiens_dbSNP_20111119 = derive2 { name="SNPlocs.Hsapiens.dbSNP.20111119"; version="0.99.7"; sha256="1znblqzb1hx5yjs2g387l3az8dga51si5blpwngvs0zbbdypgww8"; depends=[GenomicRanges IRanges S4Vectors]; }; - SNPlocs_Hsapiens_dbSNP_20120608 = derive2 { name="SNPlocs.Hsapiens.dbSNP.20120608"; version="0.99.10"; sha256="10crnx5jk2790h936j515jgdf2mirzzmlnvn6pbp81fd5imkvdpd"; depends=[BSgenome GenomicRanges IRanges]; }; - SNPlocs_Hsapiens_dbSNP141_GRCh38 = derive2 { name="SNPlocs.Hsapiens.dbSNP141.GRCh38"; version="0.99.10"; sha256="1a8ic2naa6bqc1fcylxc81j51xmc249fn40nk4yrvpjz59d6h381"; depends=[BSgenome GenomicRanges IRanges S4Vectors]; }; + SNPlocs_Hsapiens_dbSNP_20120608 = derive2 { name="SNPlocs.Hsapiens.dbSNP.20120608"; version="0.99.11"; sha256="0a1nyni8h3a7sq2sj5jfn3w6abkl5lwzbzhb8kg74v4359albcgm"; depends=[BSgenome GenomicRanges IRanges]; }; + SNPlocs_Hsapiens_dbSNP141_GRCh38 = derive2 { name="SNPlocs.Hsapiens.dbSNP141.GRCh38"; version="0.99.11"; sha256="1dl5gs9iqdvaplvggpngp37pzgbjaavw98qppv2cp65ih9rn0wc0"; depends=[BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; SNPlocs_Hsapiens_dbSNP142_GRCh37 = derive2 { name="SNPlocs.Hsapiens.dbSNP142.GRCh37"; version="0.99.5"; sha256="13kmgfwzwmbrwd2g24a3cbp634jih7jigzhzq55bzzf3js48h3n3"; depends=[BSgenome GenomeInfoDb GenomicRanges IRanges]; }; - SNPlocs_Hsapiens_dbSNP144_GRCh37 = derive2 { name="SNPlocs.Hsapiens.dbSNP144.GRCh37"; version="0.99.11"; sha256="069fkjplii6p63w8b3fjk87ynl5xv7d5bgnr78ia2n95yv6iqzjw"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; - SNPlocs_Hsapiens_dbSNP144_GRCh38 = derive2 { name="SNPlocs.Hsapiens.dbSNP144.GRCh38"; version="0.99.11"; sha256="1wzxb7d8v3yx8fvra4yy1zyvvh0l53ad87ksp3i1xj413cvph671"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; + SNPlocs_Hsapiens_dbSNP144_GRCh37 = derive2 { name="SNPlocs.Hsapiens.dbSNP144.GRCh37"; version="0.99.20"; sha256="1z8kx43ki1jvj7ms7pcybakcdimfwr6zpjvspkjmma97bdz093iz"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; + SNPlocs_Hsapiens_dbSNP144_GRCh38 = derive2 { name="SNPlocs.Hsapiens.dbSNP144.GRCh38"; version="0.99.20"; sha256="0yxmsnxncr7w30r0d7bg5i96pclm2vf40p9jdqa02rc67a6sximn"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; + SNPlocs_Hsapiens_dbSNP149_GRCh38 = derive2 { name="SNPlocs.Hsapiens.dbSNP149.GRCh38"; version="0.99.20"; sha256="17bv25p1261hn9d7mxfp6pvivj15pxyvr92gms8a8msfqg9y0xkb"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; + SNPlocs_Hsapiens_dbSNP150_GRCh38 = derive2 { name="SNPlocs.Hsapiens.dbSNP150.GRCh38"; version="0.99.20"; sha256="0jkwwgxxpm9ry8kizq8hs70sky41pks1ag40y5aqq91yjbpqlckj"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; TxDb_Athaliana_BioMart_plantsmart22 = derive2 { name="TxDb.Athaliana.BioMart.plantsmart22"; version="3.0.1"; sha256="0j2zr4cddad7z1lxx9m9kfgyy7jajjnblpk9j8igd39ia3ixrpzc"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Athaliana_BioMart_plantsmart25 = derive2 { name="TxDb.Athaliana.BioMart.plantsmart25"; version="3.1.3"; sha256="0a6v0l6p13zmiysi3k8dxzdlxng552qqj9rnlbdavdiidla0pvm3"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Athaliana_BioMart_plantsmart28 = derive2 { name="TxDb.Athaliana.BioMart.plantsmart28"; version="3.2.2"; sha256="1yjyvrbx55y024lqg3b2rlf8pngqw5xi3p83j5ipan05wf0aq6ir"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Btaurus_UCSC_bosTau8_refGene = derive2 { name="TxDb.Btaurus.UCSC.bosTau8.refGene"; version="3.4.0"; sha256="1grg9vjsvlrcfdnn25q5rnr2d92ff73xfpv9fh215r23b552a5f5"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Celegans_UCSC_ce11_refGene = derive2 { name="TxDb.Celegans.UCSC.ce11.refGene"; version="3.4.0"; sha256="0sz0jd08kh604kq830h4k5g7f3dpqq0dypz0jyc1hp7mf367h16b"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Btaurus_UCSC_bosTau8_refGene = derive2 { name="TxDb.Btaurus.UCSC.bosTau8.refGene"; version="3.4.2"; sha256="1p7yhxdlmr4fbp4mxakdwp2xf609ws6pyrjl8xq3ilzhf6fyypim"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Celegans_UCSC_ce11_refGene = derive2 { name="TxDb.Celegans.UCSC.ce11.refGene"; version="3.4.2"; sha256="0g4l5r6mqvjsvq3q6kzlvi0w75hm2bxdq0p0pbdpdm8lf9d5aca3"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Celegans_UCSC_ce6_ensGene = derive2 { name="TxDb.Celegans.UCSC.ce6.ensGene"; version="3.2.2"; sha256="1sgppva33cdy4isj2is8mfalj5gmmkpbkq9w1d83a4agcq31mi90"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Cfamiliaris_UCSC_canFam3_refGene = derive2 { name="TxDb.Cfamiliaris.UCSC.canFam3.refGene"; version="3.3.0"; sha256="0h0n3yqdzqip1ikqq396pziyn0l5651yg87bb0cgc3gy2ldsrl74"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Cfamiliaris_UCSC_canFam3_refGene = derive2 { name="TxDb.Cfamiliaris.UCSC.canFam3.refGene"; version="3.4.2"; sha256="19vr9wi2hspsij7gwq7wnlg94zlcqvn639z3jr8s3yngr89d9mnj"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Dmelanogaster_UCSC_dm3_ensGene = derive2 { name="TxDb.Dmelanogaster.UCSC.dm3.ensGene"; version="3.2.2"; sha256="1337x23rdmiiza83ms225kri37h16q5hw1lw0m577abcgip3d7c7"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Dmelanogaster_UCSC_dm6_ensGene = derive2 { name="TxDb.Dmelanogaster.UCSC.dm6.ensGene"; version="3.3.0"; sha256="1kgwb63z37zq5mspqzf2rb09vl8b71kn8aa3fsmyn8phmhay98zw"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Drerio_UCSC_danRer10_refGene = derive2 { name="TxDb.Drerio.UCSC.danRer10.refGene"; version="3.4.0"; sha256="0vgvjb6jqzqgmnnqjx9qdn2by01p1pfrqd1ks91q2db6wqcm5jjv"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Ggallus_UCSC_galGal4_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal4.refGene"; version="3.4.0"; sha256="07d21x4sw4gwszi32wjli9hczgr1g579pq0zyzndwvkibqawvdwh"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Dmelanogaster_UCSC_dm6_ensGene = derive2 { name="TxDb.Dmelanogaster.UCSC.dm6.ensGene"; version="3.4.1"; sha256="0sdw0gbk84lfjmiyy2x4q01zh1vbjq3vfziwxkb4h0v6nab63k01"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Drerio_UCSC_danRer10_refGene = derive2 { name="TxDb.Drerio.UCSC.danRer10.refGene"; version="3.4.2"; sha256="1cqc7vlv2jrznh9s0yb70nwy0a2pa7iswr4m253zx6p197igf33l"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Ggallus_UCSC_galGal4_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal4.refGene"; version="3.4.2"; sha256="0d7wqrg69kj65rga9m473ji1s9251gvz6l071ibqmga31imrgb9l"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Ggallus_UCSC_galGal5_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal5.refGene"; version="3.4.2"; sha256="1j68yqfbnas21za7y63p1kpi85jbxb7l3m6i50ig9mp6mmvy7i26"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Hsapiens_BioMart_igis = derive2 { name="TxDb.Hsapiens.BioMart.igis"; version="2.3.2"; sha256="0590a2hkrpm33hmjg5g0gm6sig3xvc09m0q6lwmafgaajf90h6ky"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Hsapiens_UCSC_hg18_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg18.knownGene"; version="3.2.2"; sha256="1yk9ggclkqqfzrdp8gcqyplvif824pa7df54ck5gb1xb9q5s975w"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Hsapiens_UCSC_hg19_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg19.knownGene"; version="3.2.2"; sha256="1sajhcqqwazgz2lqbik7rd935i7kpnh08zxbp2ra10j72yqy4g86"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Hsapiens_UCSC_hg19_lincRNAsTranscripts = derive2 { name="TxDb.Hsapiens.UCSC.hg19.lincRNAsTranscripts"; version="3.2.2"; sha256="0bmbp7kydvviczw8axgxq2wdlwq6fdas90jk9bg56avjq5syws2g"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Hsapiens_UCSC_hg38_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg38.knownGene"; version="3.4.0"; sha256="0i0xw0mcn403r911ijqdnrwg9k5bspdnjibfjvnhxq4h8vcfprn5"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Mmulatta_UCSC_rheMac3_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac3.refGene"; version="3.4.0"; sha256="0ap8qn2bza0j9ismnpv2l64wdbzc9i0q6sb1w195134hwq9cr51y"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Mmulatta_UCSC_rheMac8_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac8.refGene"; version="3.4.0"; sha256="1d61p9aj2wv4gdx2q5g33j7hipzfj1a4zi6apn058cffy1clyrn9"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Mmulatta_UCSC_rheMac3_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac3.refGene"; version="3.4.2"; sha256="1k2kaik3zvnx3giia1dps06073xkbvd4dva6npskkvzhvqpfxq41"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Mmulatta_UCSC_rheMac8_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac8.refGene"; version="3.4.2"; sha256="1wma6pm5v9qv29h76p7aj7kwq0l857as0wgya3ryj3mynhsf9j9j"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Mmusculus_UCSC_mm10_ensGene = derive2 { name="TxDb.Mmusculus.UCSC.mm10.ensGene"; version="3.4.0"; sha256="0saxi1fdiwd38sfvy1rynd3v44rbp158jv6sjqcivvaqnd84zg9s"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Mmusculus_UCSC_mm10_knownGene = derive2 { name="TxDb.Mmusculus.UCSC.mm10.knownGene"; version="3.4.0"; sha256="08gava9wsvpcqz51k2sni3pj03n5155v32d9riqbf305nbirqbkb"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Mmusculus_UCSC_mm9_knownGene = derive2 { name="TxDb.Mmusculus.UCSC.mm9.knownGene"; version="3.2.2"; sha256="16bjxy00363hf91ik2mqlqls86i07gia72qh92xc3l1ncch61mx2"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Ptroglodytes_UCSC_panTro4_refGene = derive2 { name="TxDb.Ptroglodytes.UCSC.panTro4.refGene"; version="3.4.0"; sha256="08kihk3sl1hw32rf8122y03grbg1xdbc84z1b2ldnf752xr4zn9x"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Ptroglodytes_UCSC_panTro4_refGene = derive2 { name="TxDb.Ptroglodytes.UCSC.panTro4.refGene"; version="3.4.2"; sha256="0gqrv5n1c63p5cdl1c0l866x9qgfqf6w23p6m12zaxn8riacdnyi"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Rnorvegicus_BioMart_igis = derive2 { name="TxDb.Rnorvegicus.BioMart.igis"; version="2.3.2"; sha256="1099vkk8g3lxbgjxsm1p1m3mjj08nsw282mqxgzpnrxf7m6jll76"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Rnorvegicus_UCSC_rn4_ensGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn4.ensGene"; version="3.2.2"; sha256="0gv8bynfxxa471ap069mjvfrb1d7a0c4w5k8hxkr4hnsm44mschm"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Rnorvegicus_UCSC_rn5_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn5.refGene"; version="3.4.0"; sha256="1p3m7g24x7pvavwix5r5kyqsklv7hxav23nz36cs7gsqh1ifizaq"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Rnorvegicus_UCSC_rn6_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn6.refGene"; version="3.4.0"; sha256="1f1b16ya35x7x5x2j7a62qlg2ka5wd3521kfbk2xp4dr8h5ah6mx"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Rnorvegicus_UCSC_rn5_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn5.refGene"; version="3.4.2"; sha256="11yxvr20dmjjxw4pyxfnxy8znlxr48xqq9hb6k95y9dyqnir0vik"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Rnorvegicus_UCSC_rn6_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn6.refGene"; version="3.4.1"; sha256="08w4279c5aq5pazbbdji344lxz113n763q8j2mlagcwfs9r5k9sk"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Scerevisiae_UCSC_sacCer2_sgdGene = derive2 { name="TxDb.Scerevisiae.UCSC.sacCer2.sgdGene"; version="3.2.2"; sha256="0l5gcwhbvzx60p9hjhd31angamb0hkgdg2avga7341j77rd5pwza"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Scerevisiae_UCSC_sacCer3_sgdGene = derive2 { name="TxDb.Scerevisiae.UCSC.sacCer3.sgdGene"; version="3.2.2"; sha256="1sjwl7fb3l3zxxbk8gkvzxwdsind0xjj7kmh7dachm6fi17hpb3d"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Sscrofa_UCSC_susScr3_refGene = derive2 { name="TxDb.Sscrofa.UCSC.susScr3.refGene"; version="3.4.0"; sha256="0jpvb3phw0967my7afk8scsjzpq1x0i2za534ndizzql3cp45yh7"; depends=[AnnotationDbi GenomicFeatures]; }; @@ -294,22 +290,22 @@ in with self; { agcdf = derive2 { name="agcdf"; version="2.18.0"; sha256="07hq41dwqs7yy2sck8p7zl3v9x4bgl35kkycpazz5ql2g5zy6b7j"; depends=[AnnotationDbi]; }; agprobe = derive2 { name="agprobe"; version="2.18.0"; sha256="1vnawamcpz16na8nmlq2czfxcr325fwdnngxl65mmnbd0f4lmy3k"; depends=[AnnotationDbi]; }; alternativeSplicingEvents_hg19 = derive2 { name="alternativeSplicingEvents.hg19"; version="1.0.0"; sha256="1bcqn20a963l49ah3j59nmd5qd15qad56p7k3880q4cp7qza2xsw"; depends=[AnnotationHub]; }; - anopheles_db0 = derive2 { name="anopheles.db0"; version="3.4.1"; sha256="0pzd8yij4ixdp48sr0ksjdmx3mw9gaizgj1rx33375a7091580yf"; depends=[AnnotationDbi]; }; - arabidopsis_db0 = derive2 { name="arabidopsis.db0"; version="3.4.1"; sha256="0rcpiaf0157c8v433a7khnam6g15siai1xbmf4gviw5vgw8l5a9l"; depends=[AnnotationDbi]; }; + anopheles_db0 = derive2 { name="anopheles.db0"; version="3.5.0"; sha256="0ycprvhry525p4hmxng2swcf92m9fsyqcj8na13q9i5p6s1sl5b2"; depends=[AnnotationDbi]; }; + arabidopsis_db0 = derive2 { name="arabidopsis.db0"; version="3.5.0"; sha256="0xpa7d15av8pa2l5ksx8mcabhyfdxyk1hw2sd1gdyhyfcn7mjxky"; depends=[AnnotationDbi]; }; ath1121501_db = derive2 { name="ath1121501.db"; version="3.2.3"; sha256="1zrf26cfhlmrb5pyfawwk4v8l1mflx8c43zsxrwkbmxzc1jnc7dv"; depends=[AnnotationDbi org_At_tair_db]; }; ath1121501cdf = derive2 { name="ath1121501cdf"; version="2.18.0"; sha256="1naq8f8dwgbmndx178nm2pw6hjx5ljx0w1wb4dfjifnl4bs5rqcc"; depends=[AnnotationDbi]; }; ath1121501probe = derive2 { name="ath1121501probe"; version="2.18.0"; sha256="0a2nd8zhp3ybis780l3rrmwcxskbl3a111g8w6m8qfwsw5vnlqg1"; depends=[AnnotationDbi]; }; barley1cdf = derive2 { name="barley1cdf"; version="2.18.0"; sha256="0rbij5cqr2sz33y5waybv85nrcgf70iwj5gk13g0xn9p1l1zxyn2"; depends=[AnnotationDbi]; }; barley1probe = derive2 { name="barley1probe"; version="2.18.0"; sha256="1kh5r748b4vkmvlfaclmrh07ypbrzgxn90liqfz1rwkabh6rfk71"; depends=[AnnotationDbi]; }; bovine_db = derive2 { name="bovine.db"; version="3.2.3"; sha256="1i8mgk60hlmvngb4c727wajix9mca9gfg0pzxrnfcjwi87rpw7fy"; depends=[AnnotationDbi org_Bt_eg_db]; }; - bovine_db0 = derive2 { name="bovine.db0"; version="3.4.1"; sha256="113pi0dr4jc0vr2gfm8pkavz72s16bw3l6ml3hmvzjy89yg9r0s0"; depends=[AnnotationDbi]; }; + bovine_db0 = derive2 { name="bovine.db0"; version="3.5.0"; sha256="0h02wrj18c24rgkbdnva5qc3znn30i5357c9rzww7y4brhhww8ma"; depends=[AnnotationDbi]; }; bovinecdf = derive2 { name="bovinecdf"; version="2.18.0"; sha256="13mf0yy0dypkm5n2ghl04xm6ayb9bn9qijqhgynksghi7s2k34mb"; depends=[AnnotationDbi]; }; bovineprobe = derive2 { name="bovineprobe"; version="2.18.0"; sha256="0i4afa5dksnir2nfrfh2cynjm59sm6vfaqa9wyag8cxg7c2nlm1i"; depends=[AnnotationDbi]; }; bsubtiliscdf = derive2 { name="bsubtiliscdf"; version="2.18.0"; sha256="1rihrjim37b49rhqr4nxga8sp67qri9xqlqc141mhbngh6cw3iyl"; depends=[AnnotationDbi]; }; bsubtilisprobe = derive2 { name="bsubtilisprobe"; version="2.18.0"; sha256="0k99hvgaswn96x4yanvr9cy8bdy69sd5q7yp6dj9synxj7s1fcw9"; depends=[AnnotationDbi]; }; cMAP = derive2 { name="cMAP"; version="1.15.1"; sha256="0pzizm27rgcaic7wsh52z30v1jwarmz4cwh1mksbygp63k54mwiv"; depends=[]; }; canine_db = derive2 { name="canine.db"; version="3.2.3"; sha256="0wbyzhk827l49yxzimvznx9z6yag5nd4djm2hddysf5nk1ndapqs"; depends=[AnnotationDbi org_Cf_eg_db]; }; - canine_db0 = derive2 { name="canine.db0"; version="3.4.1"; sha256="11imzg70ffkfnb1q6i9q3mj033ncl9pmzpkv2wp3nc3l5nz8z2sg"; depends=[AnnotationDbi]; }; + canine_db0 = derive2 { name="canine.db0"; version="3.5.0"; sha256="1a7qn0jg1yw8222k72058ymbws14fs0y6m4girxzs3v8xbyxji7v"; depends=[AnnotationDbi]; }; canine2_db = derive2 { name="canine2.db"; version="3.2.3"; sha256="1gzd2x23dkfiwnwqz9pdn5lp4l8aby525mhscn3xakw633si4dvz"; depends=[AnnotationDbi org_Cf_eg_db]; }; canine2cdf = derive2 { name="canine2cdf"; version="2.18.0"; sha256="077cmmnhjdk0vxjzm1kqf3q5kgx6chwkm59dr4s5dy019rqb6sqr"; depends=[AnnotationDbi]; }; canine2probe = derive2 { name="canine2probe"; version="2.18.0"; sha256="1l849a1dqy4kpcsxs0lvb48ag81i0f0ys0w4757rw4kp8ry59z4b"; depends=[AnnotationDbi]; }; @@ -319,20 +315,20 @@ in with self; { celeganscdf = derive2 { name="celeganscdf"; version="2.18.0"; sha256="0a6w0a48azg0i21j3aqb7fnxck3ff9w3gsi89bnlfh0zx6pknx7p"; depends=[AnnotationDbi]; }; celegansprobe = derive2 { name="celegansprobe"; version="2.18.0"; sha256="05k7si3f8pzkyb8jv0r2vkavbrqxsn4nawl92gcphfsylrwcddqb"; depends=[AnnotationDbi]; }; chicken_db = derive2 { name="chicken.db"; version="3.2.3"; sha256="1rq9afkpcpv8qi75shvnsw8di3ycai4ylv7jq9zwj51zlwlw9cpq"; depends=[AnnotationDbi org_Gg_eg_db]; }; - chicken_db0 = derive2 { name="chicken.db0"; version="3.4.1"; sha256="0gfd9nrkdnjymqdssijp5r9mdj2r6bmnkf6y4xh6ri90b02d1xpf"; depends=[AnnotationDbi]; }; + chicken_db0 = derive2 { name="chicken.db0"; version="3.5.0"; sha256="134ch8bgzjdra9pycs49lmak380qgx71dbmr1s276pyf3h67fzxp"; depends=[AnnotationDbi]; }; chickencdf = derive2 { name="chickencdf"; version="2.18.0"; sha256="09hhim5s9xj7n2b5rhn1svf5qly2mn0rr2v2ls25hfzyrqcbxlz1"; depends=[AnnotationDbi]; }; chickenprobe = derive2 { name="chickenprobe"; version="2.18.0"; sha256="1fdsiwfyg7fwslrr7xs3gny7sw24bzg5k1fvlyzb1477sgj0pid3"; depends=[AnnotationDbi]; }; - chimp_db0 = derive2 { name="chimp.db0"; version="3.4.1"; sha256="06z4kmpnsj98mi5j0ahz57grlbdqb8ycl8rf592561lvmzzdfs8h"; depends=[AnnotationDbi]; }; + chimp_db0 = derive2 { name="chimp.db0"; version="3.5.0"; sha256="12smymvq4l7aw454lah9gd0rywgi3bcbd3vf8h6a93y2mnhdxz9q"; depends=[AnnotationDbi]; }; citruscdf = derive2 { name="citruscdf"; version="2.18.0"; sha256="1326mj1xf3k4v5iyyn46whx24qfng0x3cv6rvckdr1ycc1v887dn"; depends=[AnnotationDbi]; }; citrusprobe = derive2 { name="citrusprobe"; version="2.18.0"; sha256="0bf1wic136cxwgs4j13wsyqasnyvr0jw1hzg6qizndmy7g8hrb87"; depends=[AnnotationDbi]; }; - clariomdhumanprobeset_db = derive2 { name="clariomdhumanprobeset.db"; version="8.5.0"; sha256="0hb3bsdh79aajgb9vk34kpd61py6rxv4vm8ygzm531nrh44s7a33"; depends=[AnnotationDbi org_Hs_eg_db]; }; - clariomdhumantranscriptcluster_db = derive2 { name="clariomdhumantranscriptcluster.db"; version="8.5.0"; sha256="1kfv4f0jbd4a63mk83jhpbhfhlyka9hwfik7i52kszkb8grgz48d"; depends=[AnnotationDbi org_Hs_eg_db]; }; - clariomshumanhttranscriptcluster_db = derive2 { name="clariomshumanhttranscriptcluster.db"; version="8.5.0"; sha256="07x7gl4p9dyrk41hx6d5ddsj3raz7gqimc79irfia2ismazwvd95"; depends=[AnnotationDbi org_Hs_eg_db]; }; - clariomshumantranscriptcluster_db = derive2 { name="clariomshumantranscriptcluster.db"; version="8.5.0"; sha256="0h4i35pglq6mwxxflg7l09f8a1xvhnrjygns54bnv8cyj97vq2a3"; depends=[AnnotationDbi org_Hs_eg_db]; }; - clariomsmousehttranscriptcluster_db = derive2 { name="clariomsmousehttranscriptcluster.db"; version="8.5.0"; sha256="1qvn0dpakh7g43wrssg2wyy5zi5axs7bqfmc97d8jgk56rwyzh46"; depends=[AnnotationDbi org_Mm_eg_db]; }; - clariomsmousetranscriptcluster_db = derive2 { name="clariomsmousetranscriptcluster.db"; version="8.5.0"; sha256="17y506pcfq8x9g4xl6wm9di545bgbzc54mjlybmz19c56456z5w9"; depends=[AnnotationDbi org_Mm_eg_db]; }; - clariomsrathttranscriptcluster_db = derive2 { name="clariomsrathttranscriptcluster.db"; version="8.5.0"; sha256="18dxnpvck3qfw660mx70d8psa1grzv9h43zf36qa6m958ybmcq19"; depends=[AnnotationDbi org_Rn_eg_db]; }; - clariomsrattranscriptcluster_db = derive2 { name="clariomsrattranscriptcluster.db"; version="8.5.0"; sha256="1ds9vssyg9zpp99zzd6110k1x9v2ji455k7xmk4nd699y1vfc67x"; depends=[AnnotationDbi org_Rn_eg_db]; }; + clariomdhumanprobeset_db = derive2 { name="clariomdhumanprobeset.db"; version="8.7.0"; sha256="039bsywnim0nr8b3w6vkj4m20j0pggnm6ajjz24bnlikm9zzrs6l"; depends=[AnnotationDbi org_Hs_eg_db]; }; + clariomdhumantranscriptcluster_db = derive2 { name="clariomdhumantranscriptcluster.db"; version="8.7.0"; sha256="0lp6qb4f3qsm3krcagl5fd403i5yz5apimf57wlrj99r8zrax4s2"; depends=[AnnotationDbi org_Hs_eg_db]; }; + clariomshumanhttranscriptcluster_db = derive2 { name="clariomshumanhttranscriptcluster.db"; version="8.7.0"; sha256="1f9lqyr0slynb317vp4bys3s9y9ivxnyayy6zh8cilsdz64glzmj"; depends=[AnnotationDbi org_Hs_eg_db]; }; + clariomshumantranscriptcluster_db = derive2 { name="clariomshumantranscriptcluster.db"; version="8.7.0"; sha256="0f6g20zymxnamhspv18cz32qd842nxwyf8mwznsn5yhf3brab437"; depends=[AnnotationDbi org_Hs_eg_db]; }; + clariomsmousehttranscriptcluster_db = derive2 { name="clariomsmousehttranscriptcluster.db"; version="8.7.0"; sha256="0xzzyy8ppwgii0ymkg4agrhw84qgb6hdr8pyh8flyqyd2xbih9xa"; depends=[AnnotationDbi org_Mm_eg_db]; }; + clariomsmousetranscriptcluster_db = derive2 { name="clariomsmousetranscriptcluster.db"; version="8.7.0"; sha256="1rf06mj4s6dqi77982wjjs0ssb53j4rk7q4k9wq6iwj4xgz29npk"; depends=[AnnotationDbi org_Mm_eg_db]; }; + clariomsrathttranscriptcluster_db = derive2 { name="clariomsrathttranscriptcluster.db"; version="8.7.0"; sha256="10qh0cz0jyy88nh43p3f0i588r0d8xqkgjr6s62i1273bkrpijr4"; depends=[AnnotationDbi org_Rn_eg_db]; }; + clariomsrattranscriptcluster_db = derive2 { name="clariomsrattranscriptcluster.db"; version="8.7.0"; sha256="1gh3jimr6jjkgh3zgvw9s1gynyawz8gckm9xghwsl9rii7vzy135"; depends=[AnnotationDbi org_Rn_eg_db]; }; cottoncdf = derive2 { name="cottoncdf"; version="2.18.0"; sha256="0xfwwla941fbxddykgizpar8dh8q459src7kc5wyrsd3swp3zyp5"; depends=[AnnotationDbi]; }; cottonprobe = derive2 { name="cottonprobe"; version="2.18.0"; sha256="04mfjd3a7ikif4pv46s6h9dj2s912w8ihg4yyiii7s3jlmvy62ah"; depends=[AnnotationDbi]; }; cyp450cdf = derive2 { name="cyp450cdf"; version="2.18.0"; sha256="1mbqn9940sxc0ksvykdk3i4jvnkv9q91igwn1rwmv2z18hz18qf0"; depends=[AnnotationDbi]; }; @@ -345,43 +341,19 @@ in with self; { ecoli2_db = derive2 { name="ecoli2.db"; version="3.2.3"; sha256="07vc5fl2zq2f65ndcldyzvwfpl65snp6ygvw658j4036lbb7cpjl"; depends=[AnnotationDbi org_EcK12_eg_db]; }; ecoli2cdf = derive2 { name="ecoli2cdf"; version="2.18.0"; sha256="1rkxrwadq9kg9685z9pg6rgc4bblkx5p3c6snsl4gv2k188dva9r"; depends=[AnnotationDbi]; }; ecoli2probe = derive2 { name="ecoli2probe"; version="2.18.0"; sha256="11q4ka0ncjapahic49xdl9919vm9frrwlqgj101krgkg262lfm8n"; depends=[AnnotationDbi]; }; - ecoliK12_db0 = derive2 { name="ecoliK12.db0"; version="3.4.1"; sha256="1v9qa6pxwwc3ykh8nasi42vld07c9il0j72vfc8lpsxi9v56l5cs"; depends=[AnnotationDbi]; }; - ecoliSakai_db0 = derive2 { name="ecoliSakai.db0"; version="3.4.1"; sha256="18shfvqbv925xi694zv8c1mfxndrnsmkxdncncld11ra17wqs6cp"; depends=[AnnotationDbi]; }; + ecoliK12_db0 = derive2 { name="ecoliK12.db0"; version="3.5.0"; sha256="0g11rjb0373dc3a5m4padk43p4l204yw4lmvasnvk0p6cl0c4zlw"; depends=[AnnotationDbi]; }; + ecoliSakai_db0 = derive2 { name="ecoliSakai.db0"; version="3.5.0"; sha256="1cwafxgai0lfwv7fdicrla3lj6k5lv7wz3vz6a0vqzhna3wb3ajz"; depends=[AnnotationDbi]; }; ecoliasv2cdf = derive2 { name="ecoliasv2cdf"; version="2.18.0"; sha256="16i6has9qgmzakcy24racc1h9j331wndv5c87qp5r1zrai61zyav"; depends=[AnnotationDbi]; }; ecoliasv2probe = derive2 { name="ecoliasv2probe"; version="2.18.0"; sha256="1hfrnal170cdigc2fmnynb75jjsiq77p4x6ws9gah558hvx87nk3"; depends=[AnnotationDbi]; }; ecolicdf = derive2 { name="ecolicdf"; version="2.18.0"; sha256="18g5prjykn356k35m131ifn128k5mhij2x26balqav0azigzjqsn"; depends=[AnnotationDbi]; }; ecoliprobe = derive2 { name="ecoliprobe"; version="2.18.0"; sha256="17g5zxfzsak7a0w51irc0w1w2i5ngdkx9db6rhv1fyp8mfjgaphd"; depends=[AnnotationDbi]; }; - fitCons_UCSC_hg19 = derive2 { name="fitCons.UCSC.hg19"; version="3.4.0"; sha256="1nlbmzngg077p1bz462qsyvhc9k6pn2vzmvmsqs0hwrxsk2myvgq"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; }; - fly_db0 = derive2 { name="fly.db0"; version="3.4.1"; sha256="10bh5mrl163w433fr8g8n5b190wqcldxvxdamw13gwn79hymbjr4"; depends=[AnnotationDbi]; }; - gahgu133a_db = derive2 { name="gahgu133a.db"; version="2.2.0"; sha256="1ikyvj1gi39qbakpn5wl0823ljavng1k33zvpf2k24jdhdw927qb"; depends=[AnnotationDbi]; }; - gahgu133acdf = derive2 { name="gahgu133acdf"; version="2.2.1"; sha256="0hvd4iwj2fjiqp1jzbz68i1w6jn77nrsih316jlj85bhb35f7cyv"; depends=[]; }; - gahgu133aprobe = derive2 { name="gahgu133aprobe"; version="2.2.1"; sha256="108lki2bg55ysh485shxxsz1imm26g5a3grgcmxbfs4pgna3g4h0"; depends=[AnnotationDbi]; }; - gahgu133b_db = derive2 { name="gahgu133b.db"; version="2.2.0"; sha256="06hyjnr387wk40jjdk8gzqpfp4afjzva9fky3l4qs249ycy4snic"; depends=[AnnotationDbi]; }; - gahgu133bcdf = derive2 { name="gahgu133bcdf"; version="2.2.1"; sha256="0qbqirflzjy0is3m9zca1660aszxf947fa7d26baw6vm2b37qg4q"; depends=[]; }; - gahgu133bprobe = derive2 { name="gahgu133bprobe"; version="2.2.1"; sha256="1i8wcnp8434f6zxib86yhpm904clwg907x1hgjfsgy4viqa4jbqv"; depends=[AnnotationDbi]; }; - gahgu133plus2_db = derive2 { name="gahgu133plus2.db"; version="2.2.0"; sha256="1p48q1zqrjdvv6qq5br9v24fpryp2zy3z079nkgrgr4d2brvhab8"; depends=[AnnotationDbi]; }; - gahgu133plus2cdf = derive2 { name="gahgu133plus2cdf"; version="2.2.1"; sha256="1fmv6rrjbii1g5grcvgl13w814mbqqyqyav0wi82d30v4ijz58g9"; depends=[]; }; - gahgu133plus2probe = derive2 { name="gahgu133plus2probe"; version="2.2.1"; sha256="0r3vizwmvy0jmsqbplagkincj5xs71dk7csgwwv4arx80kbl9l9l"; depends=[AnnotationDbi]; }; - gahgu95av2_db = derive2 { name="gahgu95av2.db"; version="2.2.0"; sha256="1c1hc79rjisx7jd7sdlr2d1lnk621y8azshriia12b5z0l5j9m4h"; depends=[AnnotationDbi]; }; - gahgu95av2cdf = derive2 { name="gahgu95av2cdf"; version="2.2.1"; sha256="1ckcjlb4v9x9zynf5w1h5fgmdr4ck22h9bjfwz3n184v48wgi39r"; depends=[]; }; - gahgu95av2probe = derive2 { name="gahgu95av2probe"; version="2.2.1"; sha256="033zk49kp4r5in6yk3za8ll5wrchiklfrzc10c8lgqhpm6y8y5k2"; depends=[AnnotationDbi]; }; - gahgu95b_db = derive2 { name="gahgu95b.db"; version="2.2.0"; sha256="0v4lpbqqhm6mvpm0biykcq0ym1rb968zcwp9rg1lv6zka5arj9fq"; depends=[AnnotationDbi]; }; - gahgu95bcdf = derive2 { name="gahgu95bcdf"; version="2.2.1"; sha256="1f8yp4g3cjbl11x0wajln7bms3jhy6cbyh0bggm38gbb18gws4wg"; depends=[]; }; - gahgu95bprobe = derive2 { name="gahgu95bprobe"; version="2.2.1"; sha256="1lr91f57ym3lxz5bi9xm3g63vskw5js991h5zk4c2i2npi0x22gm"; depends=[AnnotationDbi]; }; - gahgu95c_db = derive2 { name="gahgu95c.db"; version="2.2.0"; sha256="1psjf511agrv7nma4wa39jgd82z82df42d5g8jvwjrm2wb6l2v4l"; depends=[AnnotationDbi]; }; - gahgu95ccdf = derive2 { name="gahgu95ccdf"; version="2.2.1"; sha256="1lcal0y48vhafikkrn744l1gxrnlhkh7jmmhb7pglc9ldh7x9azh"; depends=[]; }; - gahgu95cprobe = derive2 { name="gahgu95cprobe"; version="2.2.1"; sha256="155vnch85m6ph7av8j4ylrqajm3vc2v623qpkixqh06l4fy59pck"; depends=[AnnotationDbi]; }; - gahgu95d_db = derive2 { name="gahgu95d.db"; version="2.2.0"; sha256="0k0ricb8cl3xh93nq8rr3206w18b91ca67992cc5b2fbaf8lxlba"; depends=[AnnotationDbi]; }; - gahgu95dcdf = derive2 { name="gahgu95dcdf"; version="2.2.1"; sha256="181h5i9ywpn6vwdvcd2sq5yxkx41h09plgqsdfigw5w7816524k6"; depends=[]; }; - gahgu95dprobe = derive2 { name="gahgu95dprobe"; version="2.2.1"; sha256="0znll2h3cm1sbyzjk121fxizs4qv5jd80kslr5zhdd73dkdlzlbm"; depends=[AnnotationDbi]; }; - gahgu95e_db = derive2 { name="gahgu95e.db"; version="2.2.0"; sha256="1qbsshgvzfavpjrawn3lbl0pcfwl0g7n8vr1109gvax6gj00la7n"; depends=[AnnotationDbi]; }; - gahgu95ecdf = derive2 { name="gahgu95ecdf"; version="2.2.1"; sha256="1bsh380h7ai4l6j8jjz8yzfdwgxyhpnqm5fnb6mgma76xbiwab4b"; depends=[]; }; - gahgu95eprobe = derive2 { name="gahgu95eprobe"; version="2.2.1"; sha256="0c4zx8d7qsb3xhy0prfh7l6xbklgpxbbznqhq9mmgjb8qh5g9ygz"; depends=[AnnotationDbi]; }; + fitCons_UCSC_hg19 = derive2 { name="fitCons.UCSC.hg19"; version="3.6.0"; sha256="08wfrcmbpgbgfzfr9gpg25073905fhz14s8jz2wckdmhwjlgavky"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; }; + fly_db0 = derive2 { name="fly.db0"; version="3.5.0"; sha256="18r1m5b6v4km9cdyd0pkxvargh2bcz876y8iwqhbxkf16b9d70qj"; depends=[AnnotationDbi]; }; genomewidesnp5Crlmm = derive2 { name="genomewidesnp5Crlmm"; version="1.0.6"; sha256="06dmwnjy3gb53y6nr02dmp22qzfl5d63wppazrabcqbzwimhnvp8"; depends=[]; }; genomewidesnp6Crlmm = derive2 { name="genomewidesnp6Crlmm"; version="1.0.7"; sha256="16qcxa32fmbdcv5dck0grsnqyfcqql7wpxa1l6andv9hrvabv2jx"; depends=[]; }; gp53cdf = derive2 { name="gp53cdf"; version="2.18.0"; sha256="11p69rxia8bqajix3jg34vnhczyxgpq50k5kdh878h7bn0mpg6bj"; depends=[AnnotationDbi]; }; - grasp2db = derive2 { name="grasp2db"; version="0.1.14"; sha256="14y25k1fwh0272ws83rcpi25wc97r4z5mpmck8q9i9nshd5dmym4"; depends=[AnnotationHub digest dplyr GenomeInfoDb RSQLite]; }; - greengenes13_5MgDb = derive2 { name="greengenes13.5MgDb"; version="0.99.0"; sha256="1ssh015yspl470wq5rnkxkb7xid27gzvga3hx9a9vj08iqal3rbq"; depends=[metagenomeFeatures]; }; + grasp2db = derive2 { name="grasp2db"; version="1.1.0"; sha256="1aq19myhcl9kdmzy8f4c3ilf0s0ng99rl58jja2xlmqsm2hik7ya"; depends=[AnnotationHub dbplyr digest dplyr GenomeInfoDb RSQLite]; }; + greengenes13_5MgDb = derive2 { name="greengenes13.5MgDb"; version="1.0.0"; sha256="0y9570c7cchwv9d5rgwhfz6k5qmi11g2smqq8q23z66iv333kii1"; depends=[metagenomeFeatures]; }; h10kcod_db = derive2 { name="h10kcod.db"; version="3.4.0"; sha256="0f30n339ib8q478a7axjdh8hzrqws762m680ha0sxm3a0nxwapgg"; depends=[AnnotationDbi org_Hs_eg_db]; }; h20kcod_db = derive2 { name="h20kcod.db"; version="3.4.0"; sha256="0csh59bgpn5xyaw6bfg7nvi9vcvjd4f66f0dr3xh7c6316835mnx"; depends=[AnnotationDbi org_Hs_eg_db]; }; hapmap370k = derive2 { name="hapmap370k"; version="1.0.1"; sha256="0n6rmrqcbl665a1l6jxk1gn6518x4gxadzy5dc9k9v01cbh3qzmw"; depends=[]; }; @@ -452,8 +424,8 @@ in with self; { hom_Sc_inp_db = derive2 { name="hom.Sc.inp.db"; version="3.1.2"; sha256="0l9nly3k7jnf6g1qnwyw22ga1hdyjdvn3hrlway8pb9rv7279bil"; depends=[AnnotationDbi]; }; hs25kresogen_db = derive2 { name="hs25kresogen.db"; version="2.5.0"; sha256="1yp25ifm3bwzkzm8vimlxw5slini7drhvmh5ggh0z80sfrjyndyf"; depends=[AnnotationDbi org_Hs_eg_db]; }; hspeccdf = derive2 { name="hspeccdf"; version="0.99.1"; sha256="07azl9zpg552ic7li14p6n09ba3jbqqclwffjfpd2vc249x0n4fw"; depends=[AnnotationDbi]; }; - hta20probeset_db = derive2 { name="hta20probeset.db"; version="8.5.0"; sha256="0d1gydcxgcxgchg7imlbkc6acz6py894v6m2i7wl6mpm793az7r6"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hta20transcriptcluster_db = derive2 { name="hta20transcriptcluster.db"; version="8.5.0"; sha256="114l2jh1zg4jiirw2gp5djp7x4yf9l9x4hrxfflzzk2b0gc66fwk"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hta20probeset_db = derive2 { name="hta20probeset.db"; version="8.7.0"; sha256="12m58w0av2b806w75df7spg72d0v7mr7vlhsgdc9h221r0g06vgx"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hta20transcriptcluster_db = derive2 { name="hta20transcriptcluster.db"; version="8.7.0"; sha256="1aipxv8c6dwhhhxp0r75j79k038qk4jkmxcdzqiph3k0ylpikmb8"; depends=[AnnotationDbi org_Hs_eg_db]; }; hthgu133a_db = derive2 { name="hthgu133a.db"; version="3.2.3"; sha256="0sgi7pbkndcpl775qn36rdlsm4j6ip2lfk0cmkh8zqryrj3yq6hh"; depends=[AnnotationDbi org_Hs_eg_db]; }; hthgu133acdf = derive2 { name="hthgu133acdf"; version="2.18.0"; sha256="1a5b421lx0nxy3mrrxjxifwjpnv289c5q2a89xhnkwlcfhqlzqrp"; depends=[AnnotationDbi]; }; hthgu133afrmavecs = derive2 { name="hthgu133afrmavecs"; version="1.3.0"; sha256="0466xgi67r5rpp7cs06ib0cr6vvx8d881g5l96b8sh9948pbn4ss"; depends=[]; }; @@ -493,20 +465,20 @@ in with self; { hu6800subccdf = derive2 { name="hu6800subccdf"; version="2.18.0"; sha256="1xir2k62whqf39g7g5rm646nz6hxq83nldrrc3cyzch85723a55p"; depends=[AnnotationDbi]; }; hu6800subdcdf = derive2 { name="hu6800subdcdf"; version="2.18.0"; sha256="1caiyyna5ffnnx85h9f62h2fwd42wwi187g9igspcy8mn2hakpfw"; depends=[AnnotationDbi]; }; huex_1_0_st_v2frmavecs = derive2 { name="huex.1.0.st.v2frmavecs"; version="1.1.0"; sha256="0fnadflyg615v7w071jilg42w8w5fvnac7rm0wg33klvzx9c9knx"; depends=[]; }; - huex10stprobeset_db = derive2 { name="huex10stprobeset.db"; version="8.5.0"; sha256="0yrc5hf2yhxr33xr7mlrljbndbxl1mcv1ylnfak8wnhkzlbz5ir1"; depends=[AnnotationDbi org_Hs_eg_db]; }; - huex10sttranscriptcluster_db = derive2 { name="huex10sttranscriptcluster.db"; version="8.5.0"; sha256="1ybxzqqpxfdjpw7mkyn1ydyghgsv5yfp27byi3yifpjz3ymm0lzi"; depends=[AnnotationDbi org_Hs_eg_db]; }; + huex10stprobeset_db = derive2 { name="huex10stprobeset.db"; version="8.7.0"; sha256="14m5rkn9nksn84dlcl29wpahxsxhaswkcnc75mbsfagk5fh2qybj"; depends=[AnnotationDbi org_Hs_eg_db]; }; + huex10sttranscriptcluster_db = derive2 { name="huex10sttranscriptcluster.db"; version="8.7.0"; sha256="1xdsrx34625ad6sjkq166i8xlmwdwhsisi8dbjj6zkazg4mbxhd0"; depends=[AnnotationDbi org_Hs_eg_db]; }; hugene_1_0_st_v1frmavecs = derive2 { name="hugene.1.0.st.v1frmavecs"; version="1.1.0"; sha256="0jwk5mm37fil3h9h1hrc4bm3sxfdzywbmsqm1blvrvb5q6jgl50a"; depends=[]; }; - hugene10stprobeset_db = derive2 { name="hugene10stprobeset.db"; version="8.5.0"; sha256="1sh6ca1abnd5a09rcpa99gfpcnl0vjk49v8hnkbrzlrm8b6z603a"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hugene10sttranscriptcluster_db = derive2 { name="hugene10sttranscriptcluster.db"; version="8.5.0"; sha256="0ydqq477ms68q8g7k8zj5mz609cdyk5ly5mxvvkzpbfrw7r663jd"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hugene10stprobeset_db = derive2 { name="hugene10stprobeset.db"; version="8.7.0"; sha256="170fdxmhbi6k115gbmvsmmq6hphbmj7yw23ycsjr9v963pwjk0ml"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hugene10sttranscriptcluster_db = derive2 { name="hugene10sttranscriptcluster.db"; version="8.7.0"; sha256="11wr9d6bp7yf66hdfx3vnp88brwkxwbxvfdnwyyffdpcaa92c6s3"; depends=[AnnotationDbi org_Hs_eg_db]; }; hugene10stv1cdf = derive2 { name="hugene10stv1cdf"; version="2.18.0"; sha256="1drsclrcf344z4m61qxd1a1lg2qrd2h7s3y6kk7xcy76s2mqjx2f"; depends=[AnnotationDbi]; }; hugene10stv1probe = derive2 { name="hugene10stv1probe"; version="2.18.0"; sha256="1cn6hdw1mj0i4f0syvx8g1r02bbki994y3s9hrdps3kvcbaw6brd"; depends=[AnnotationDbi]; }; - hugene11stprobeset_db = derive2 { name="hugene11stprobeset.db"; version="8.5.0"; sha256="1akfj1z69s5kda10rybbpx0gl1ziwjq8nf0vr0sd24vzn3z0ml34"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hugene11sttranscriptcluster_db = derive2 { name="hugene11sttranscriptcluster.db"; version="8.5.0"; sha256="1shmhzqy5zjaj564j6gfhs5plg3rhiz46qk2mkm7xyysgkjwwq90"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hugene20stprobeset_db = derive2 { name="hugene20stprobeset.db"; version="8.5.0"; sha256="1bxhlz983ar0m72rlv3vyqkl9gyqkndyv896yyim09ah8hpln24k"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hugene20sttranscriptcluster_db = derive2 { name="hugene20sttranscriptcluster.db"; version="8.5.0"; sha256="1cz6080w523j1dvbrgslkw1qs9bspci7086azz0xn4pmqjrkr78i"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hugene21stprobeset_db = derive2 { name="hugene21stprobeset.db"; version="8.5.0"; sha256="0wcjldj9vxf73c2j9wmkra4kfd3n34yhicj53svgkcb2s9ldj8mq"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hugene21sttranscriptcluster_db = derive2 { name="hugene21sttranscriptcluster.db"; version="8.5.0"; sha256="0ndcpkkqa5bq8g70bf1119vs1pj0hzkqlmm1bxy3zw86by06gass"; depends=[AnnotationDbi org_Hs_eg_db]; }; - human_db0 = derive2 { name="human.db0"; version="3.4.1"; sha256="0dpxa3ifmqsg63rzcz333iqkhg8hjipfyvl18899d11cxxcm9wh7"; depends=[AnnotationDbi]; }; + hugene11stprobeset_db = derive2 { name="hugene11stprobeset.db"; version="8.7.0"; sha256="0nnq0mm04qlzfdslmwhjdww76h2zww4bdqfvs53580qzxnsbw2nl"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hugene11sttranscriptcluster_db = derive2 { name="hugene11sttranscriptcluster.db"; version="8.7.0"; sha256="11m9nc1l4rm8mwsnkiak7wdh6593q5x982k7iva4id8qrafykddx"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hugene20stprobeset_db = derive2 { name="hugene20stprobeset.db"; version="8.7.0"; sha256="047jc40r5z13xwxi1g64xvv8jkdx4k2xn53fqc87nm0qrcz4h1rm"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hugene20sttranscriptcluster_db = derive2 { name="hugene20sttranscriptcluster.db"; version="8.7.0"; sha256="0ba3yvizj9ya61rr9ik2hdxhy0q67908x16n58jjjfq8wf96h7sp"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hugene21stprobeset_db = derive2 { name="hugene21stprobeset.db"; version="8.7.0"; sha256="0chkxxpfl696qqiai3i30ylpsihyicbs0hbcni6nmnhfz9k5800g"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hugene21sttranscriptcluster_db = derive2 { name="hugene21sttranscriptcluster.db"; version="8.7.0"; sha256="0wk2lg74zkgxh6frmikhk4bxndiyvc1j7mhvz65w8fxfqiwfyf5i"; depends=[AnnotationDbi org_Hs_eg_db]; }; + human_db0 = derive2 { name="human.db0"; version="3.5.0"; sha256="0n1qrah9h7n4cjpvhqrimcl42p413i2wmkw6iglqg1gcbkbrihvh"; depends=[AnnotationDbi]; }; human1mduov3bCrlmm = derive2 { name="human1mduov3bCrlmm"; version="1.0.4"; sha256="1p7qpzk6svafgdafljhh4k0z7pcs78qmwwfd80r0a1yhkssmp0v9"; depends=[]; }; human1mv1cCrlmm = derive2 { name="human1mv1cCrlmm"; version="1.0.3"; sha256="1qlph3qrjv52ddzlj8pwa93zzh70x4mbdrdr7q9pan427lpck9gx"; depends=[]; }; human370quadv3cCrlmm = derive2 { name="human370quadv3cCrlmm"; version="1.0.3"; sha256="1chjx9vsmqz2whslw1l7jn7nfn7zx6pcjfmqqm9mh81i74rzrdik"; depends=[]; }; @@ -544,7 +516,7 @@ in with self; { m20kcod_db = derive2 { name="m20kcod.db"; version="3.4.0"; sha256="1p2sm5j4b50iqzwcb984qrh74c3hf6yml7b8mvxlhhhvxz4iy1np"; depends=[AnnotationDbi org_Mm_eg_db]; }; maizecdf = derive2 { name="maizecdf"; version="2.18.0"; sha256="0yfz5gjhsq4wz6j63s1b1hxjz03gsmrlfs2cdc8smq6azp3zdid4"; depends=[AnnotationDbi]; }; maizeprobe = derive2 { name="maizeprobe"; version="2.18.0"; sha256="01h5dv5i0zaqlphkii9ipxy9wswv1srgprrpr5vmi01c9d98qsk0"; depends=[AnnotationDbi]; }; - malaria_db0 = derive2 { name="malaria.db0"; version="3.4.1"; sha256="041qsj8dkpavjs444v5fyhfzl7p6s2fx6ny16m36ak3g0w528bnf"; depends=[AnnotationDbi]; }; + malaria_db0 = derive2 { name="malaria.db0"; version="3.5.0"; sha256="1q6m85ck84qg3fksmfmcrqd0s2yll9n6c3rcknh5ndmy30wdn9pl"; depends=[AnnotationDbi]; }; medicagocdf = derive2 { name="medicagocdf"; version="2.18.0"; sha256="1clz679cc887x98c6jk93cphijkbg5r2nd9idrj5901yvh6p9n5q"; depends=[AnnotationDbi]; }; medicagoprobe = derive2 { name="medicagoprobe"; version="2.18.0"; sha256="0w6j1pfkvb3npc8srpjifq2ywnqxhc9q090jqzmkx22x36cw9cl5"; depends=[AnnotationDbi]; }; mgu74a_db = derive2 { name="mgu74a.db"; version="3.2.3"; sha256="0xd2gbvry061409kiwq99i13641g8x6m9kbgg4yr0x6m9dh7hxa8"; depends=[AnnotationDbi org_Mm_eg_db]; }; @@ -585,20 +557,20 @@ in with self; { moe430b_db = derive2 { name="moe430b.db"; version="3.2.3"; sha256="0hb6pa07j5hdirpprcm9vdszbh5bkgf38gyp3g0gqvlc32nklv58"; depends=[AnnotationDbi org_Mm_eg_db]; }; moe430bcdf = derive2 { name="moe430bcdf"; version="2.18.0"; sha256="0yl5pkqj37188k2yvvsqhnhm2vx523r11sry976bwzcadlicfhvb"; depends=[AnnotationDbi]; }; moe430bprobe = derive2 { name="moe430bprobe"; version="2.18.0"; sha256="1nziw3pj4picz0aazblpqkbw82wq3vdajh9i78yfvlz1bwb2vpfi"; depends=[AnnotationDbi]; }; - moex10stprobeset_db = derive2 { name="moex10stprobeset.db"; version="8.5.0"; sha256="15i8fqp6r5q39pyhnpfqcwpqw4iar1yf9id391js0fbpz01n0hq1"; depends=[AnnotationDbi org_Mm_eg_db]; }; - moex10sttranscriptcluster_db = derive2 { name="moex10sttranscriptcluster.db"; version="8.5.0"; sha256="0idxw02vyyspkbcd80al8h3l991v9n93d5cfag9f54hriz6ra5q8"; depends=[AnnotationDbi org_Mm_eg_db]; }; + moex10stprobeset_db = derive2 { name="moex10stprobeset.db"; version="8.7.0"; sha256="18cgynzjvfwj65v06b0fmxk1b13jlpd7ljaif9hp74hk6hs6gha9"; depends=[AnnotationDbi org_Mm_eg_db]; }; + moex10sttranscriptcluster_db = derive2 { name="moex10sttranscriptcluster.db"; version="8.7.0"; sha256="1nmswvrbh9awp2bk2lbklasng9m74d12yqhxy502wnlc8s18h482"; depends=[AnnotationDbi org_Mm_eg_db]; }; mogene_1_0_st_v1frmavecs = derive2 { name="mogene.1.0.st.v1frmavecs"; version="1.1.0"; sha256="00lyakg7dhsm3jkh011mfq1vy439mds64zpm6fgyq592x3k9w2ah"; depends=[]; }; - mogene10stprobeset_db = derive2 { name="mogene10stprobeset.db"; version="8.5.0"; sha256="08nc0qn8kn4nfsxv0nxyrs9d3rw4schgl1k9sfhav1a0zp9gak5a"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mogene10sttranscriptcluster_db = derive2 { name="mogene10sttranscriptcluster.db"; version="8.5.0"; sha256="005ahfhnhdxfivhwk1qifph9civ4411clq9h7km9m4ldn0bsg23r"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mogene10stprobeset_db = derive2 { name="mogene10stprobeset.db"; version="8.7.0"; sha256="1yxl29fpp37h2w3sq2v9lmiks4m9ip9hlmasisxmqd5cvs2wnpmj"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mogene10sttranscriptcluster_db = derive2 { name="mogene10sttranscriptcluster.db"; version="8.7.0"; sha256="1k96334hvb17kxfvgiwih3pp2474fdcck9yv3h9jaf2mbbzg2q6z"; depends=[AnnotationDbi org_Mm_eg_db]; }; mogene10stv1cdf = derive2 { name="mogene10stv1cdf"; version="2.18.0"; sha256="1zhq08zsghck39ly7ymcjanzgw3xy1hqw435hwcrrlipv6i4lbmj"; depends=[AnnotationDbi]; }; mogene10stv1probe = derive2 { name="mogene10stv1probe"; version="2.18.0"; sha256="1qjnsf6cv23gnqdpcy1xqxy807y91fnaiyh95hg99v932pvika6a"; depends=[AnnotationDbi]; }; - mogene11stprobeset_db = derive2 { name="mogene11stprobeset.db"; version="8.5.0"; sha256="1zkhix305yn3s3a9bvngi62gcnmr516cr48i9mcfc4wm32vlvqwx"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mogene11sttranscriptcluster_db = derive2 { name="mogene11sttranscriptcluster.db"; version="8.5.0"; sha256="0ginnqn5p5gqha2w888i3v62qr1as4vfa3ffid3g6ylc7wr8q57c"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mogene20stprobeset_db = derive2 { name="mogene20stprobeset.db"; version="8.5.0"; sha256="1wlnbz5lycwpcj152yf683gvidymr9clyrq3sknkskdqkk6m0k11"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mogene20sttranscriptcluster_db = derive2 { name="mogene20sttranscriptcluster.db"; version="8.5.0"; sha256="1pk5z46pgj1fknknsl0cxpfmrnkss69c9apw5nxvg3kjm4m3zsyv"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mogene21stprobeset_db = derive2 { name="mogene21stprobeset.db"; version="8.5.0"; sha256="04j1ga7jfgp72pwa99p5yd7g4vk0k5964srdrpr7p9xi5664ac4r"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mogene21sttranscriptcluster_db = derive2 { name="mogene21sttranscriptcluster.db"; version="8.5.0"; sha256="175h9jaqjqhabxi3ydrmr8ykwyzw078frqj93p55b8gdwccbngzb"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mouse_db0 = derive2 { name="mouse.db0"; version="3.4.1"; sha256="1b03kqwpnwhnmv6x0cgn24qsl75hvcqmqpc1mlw8ms7hlbvaiijg"; depends=[AnnotationDbi]; }; + mogene11stprobeset_db = derive2 { name="mogene11stprobeset.db"; version="8.7.0"; sha256="02lfkn65r4ylmjz1gy9qm63ia3javj601vm2yw06vpn9r0mkw74v"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mogene11sttranscriptcluster_db = derive2 { name="mogene11sttranscriptcluster.db"; version="8.7.0"; sha256="09fw9fsk0nqmyinhfjf8aqkfix7m7kjnf27xq85x4zf1vgbw2kl9"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mogene20stprobeset_db = derive2 { name="mogene20stprobeset.db"; version="8.7.0"; sha256="0a56rxqrv1vyykv8nmnq6682s3sxzwyrcjr29h585zy5w0gnvygp"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mogene20sttranscriptcluster_db = derive2 { name="mogene20sttranscriptcluster.db"; version="8.7.0"; sha256="1s7cdjglrc9qqf3gsmhsyycfa0h5qrbk28i4z3z4mb9g6242r1r4"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mogene21stprobeset_db = derive2 { name="mogene21stprobeset.db"; version="8.7.0"; sha256="0l8y2zbhykzqs9hbjhj1cys1mzdjhmi4rjv4l3v0sv5969h6sl96"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mogene21sttranscriptcluster_db = derive2 { name="mogene21sttranscriptcluster.db"; version="8.7.0"; sha256="1mkw3997mqr7ssa60zpwhlyajda51smcrnlnxwif78g99yj0nrxb"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mouse_db0 = derive2 { name="mouse.db0"; version="3.5.0"; sha256="1plw9bjk75qyn5lb2ybvwbq2hrq67fvx0mf2m4dhr88wlncfynl3"; depends=[AnnotationDbi]; }; mouse4302_db = derive2 { name="mouse4302.db"; version="3.2.3"; sha256="1wdgqawqzkr39xwl32cap4ksr59p7r7i83g82h1ss4q3lm58gxpm"; depends=[AnnotationDbi org_Mm_eg_db]; }; mouse4302cdf = derive2 { name="mouse4302cdf"; version="2.18.0"; sha256="1mpyma4x8zfs2fmmx57xw4cfs2cf9lhw71nc3icl72d7vmwidswc"; depends=[AnnotationDbi]; }; mouse4302frmavecs = derive2 { name="mouse4302frmavecs"; version="1.5.0"; sha256="04clwkfz1gqqwrnqbavkka3hv480w6vi6c4q947qqnhw8j5jjp7s"; depends=[]; }; @@ -609,8 +581,8 @@ in with self; { mouse430a2probe = derive2 { name="mouse430a2probe"; version="2.18.0"; sha256="1f7a6mvcpv57h7kfj1qzkcwh7mdl2w9z6ysmrgan9037rd0652sz"; depends=[AnnotationDbi]; }; mouseCHRLOC = derive2 { name="mouseCHRLOC"; version="2.1.6"; sha256="0xylgnz43xmjnqdwv7pn034wfs61va21lvcpn9igdik2s42ykpp2"; depends=[]; }; mpedbarray_db = derive2 { name="mpedbarray.db"; version="3.2.3"; sha256="04pwchivzb19awnnqr9an0nl49rgdva58ip1fkgbavp3vlirxv4i"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mta10probeset_db = derive2 { name="mta10probeset.db"; version="8.5.0"; sha256="0k7mpqbd02hyc77kiacxzrq661bc27hdfj04lsdg2szm9ij14c11"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mta10transcriptcluster_db = derive2 { name="mta10transcriptcluster.db"; version="8.5.0"; sha256="1qbj0ac3xfbl0xw0xj4xix2spswgdp91qqqck8arlafpyacjc71b"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mta10probeset_db = derive2 { name="mta10probeset.db"; version="8.7.0"; sha256="1bszj4wx7x8x4vdy1np755nx4m94hqwx43mg3ymbjb1hwfjv2cdr"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mta10transcriptcluster_db = derive2 { name="mta10transcriptcluster.db"; version="8.7.0"; sha256="1vsv943xwn7y1ghw4bcyyywl4m4y0gsckdxkfyd8lg36b2gq08q9"; depends=[AnnotationDbi org_Mm_eg_db]; }; mu11ksuba_db = derive2 { name="mu11ksuba.db"; version="3.2.3"; sha256="188ld7awcgrbqxkwqyr98739x4ihmcawv3lv2ybrc0khqifylzj3"; depends=[AnnotationDbi org_Mm_eg_db]; }; mu11ksubacdf = derive2 { name="mu11ksubacdf"; version="2.18.0"; sha256="09xm3ah3zlssclblx663rlwrnmx3niabd5nf7zf7krhbpgcwhyim"; depends=[AnnotationDbi]; }; mu11ksubaprobe = derive2 { name="mu11ksubaprobe"; version="2.18.0"; sha256="1p3kc06h83ivh06a8qqcbpgbsbdfp9nnwvqfxr6d1gdn15qcp96k"; depends=[AnnotationDbi]; }; @@ -635,28 +607,25 @@ in with self; { nugomm1a520177cdf = derive2 { name="nugomm1a520177cdf"; version="3.4.0"; sha256="0skd5b76si0vydzk5qhg4f1a1j655alxflm9sqci8fi8safwj96a"; depends=[AnnotationDbi]; }; nugomm1a520177probe = derive2 { name="nugomm1a520177probe"; version="3.4.0"; sha256="1n70k0mhv146983myjgk1cgkr9rmmcpqdv8wpkcr320qcvgf9bn7"; depends=[AnnotationDbi]; }; oligoData = derive2 { name="oligoData"; version="1.8.0"; sha256="1d1yfms3jv2c4s255xnh8yxwijrj35skw3nxds7l46y88lg3qn8y"; depends=[oligo]; }; - org_Ag_eg_db = derive2 { name="org.Ag.eg.db"; version="3.4.0"; sha256="1rp0pipdfwwacfnznj65di2xny8ccjdfll882jp73yrpk8x6g9w5"; depends=[AnnotationDbi]; }; - org_At_tair_db = derive2 { name="org.At.tair.db"; version="3.4.0"; sha256="0176yrpjxdn83nvqlp24ad65fwqdfwk010lmygl0anjgnskxb3y2"; depends=[AnnotationDbi]; }; - org_Bt_eg_db = derive2 { name="org.Bt.eg.db"; version="3.4.0"; sha256="1cazky0p9rj8islivfhrmqal4q39h9hiq48mpmycpkh8qrrl7nyy"; depends=[AnnotationDbi]; }; - org_Ce_eg_db = derive2 { name="org.Ce.eg.db"; version="3.4.0"; sha256="12llfzrrc09kj2wzbisdspv38qzkzgpsbn8kv7qkwg746k3pq436"; depends=[AnnotationDbi]; }; - org_Cf_eg_db = derive2 { name="org.Cf.eg.db"; version="3.4.0"; sha256="07h339h4vh9dwb6jdr7hczcc1bka5gibi5g7b97jlpykn5qzqjrx"; depends=[AnnotationDbi]; }; - org_Dm_eg_db = derive2 { name="org.Dm.eg.db"; version="3.4.0"; sha256="1vzbphbrh1cf7xi5cksia9xy9a9l42js2z2qsajvjxvddiphrb7j"; depends=[AnnotationDbi]; }; - org_Dr_eg_db = derive2 { name="org.Dr.eg.db"; version="3.4.0"; sha256="0c1q78gbqgv915daalsgmm58xxqw4zsd3xf99m9kzfv7qd11c0nk"; depends=[AnnotationDbi]; }; - org_EcK12_eg_db = derive2 { name="org.EcK12.eg.db"; version="3.4.0"; sha256="14bv6gbznmdf3yhz2r4pqfbxc5ql7h2wv6n5alyir1fyy1gdyf0m"; depends=[AnnotationDbi]; }; - org_EcSakai_eg_db = derive2 { name="org.EcSakai.eg.db"; version="3.4.0"; sha256="1cgb7fg0c7z3f7x17b0ir8zzgvi4k1d64ryqy9mmfk9bg5n1f9y1"; depends=[AnnotationDbi]; }; - org_Gg_eg_db = derive2 { name="org.Gg.eg.db"; version="3.4.0"; sha256="0swfc1krsfgjhxgkhdnhq4x5ikviixk0pyacvl7f20gbyqlgxpsf"; depends=[AnnotationDbi]; }; - org_Hs_eg_db = derive2 { name="org.Hs.eg.db"; version="3.4.0"; sha256="19mg64pw8zcvb9yxzzyf7caz1kvdrkfsj1hd84bzq7crrh8kc4y6"; depends=[AnnotationDbi]; }; - org_Hs_ipi_db = derive2 { name="org.Hs.ipi.db"; version="1.3.0"; sha256="06nkcjcavzwgnxzmbj05i4dapszf2wq7m5s0g8d6hm7kxz5wxddy"; depends=[AnnotationDbi PAnnBuilder]; }; - org_Mm_eg_db = derive2 { name="org.Mm.eg.db"; version="3.4.0"; sha256="1lykjqjaf01fmgg3cvfcvwd5xjq6zc5vbxnm5r4l32fzvl89q50c"; depends=[AnnotationDbi]; }; - org_Mmu_eg_db = derive2 { name="org.Mmu.eg.db"; version="3.4.0"; sha256="0ba5z4fvv69bsw62wcx4smsz9fdlk01sql7scgi799ij9qzzd13v"; depends=[AnnotationDbi]; }; - org_Pf_plasmo_db = derive2 { name="org.Pf.plasmo.db"; version="3.4.0"; sha256="0miw8n5lqijfxw2q7lyxkp2srdf1rdfxyx8k87r279x23wxqgz12"; depends=[AnnotationDbi]; }; - org_Pt_eg_db = derive2 { name="org.Pt.eg.db"; version="3.4.0"; sha256="1dqj2japcbdqkisdla6aca4cjf4hbigf4gb2gn8abx5n1di0h2pi"; depends=[AnnotationDbi]; }; - org_Rn_eg_db = derive2 { name="org.Rn.eg.db"; version="3.4.0"; sha256="04az0yf3ngrz7nlbmmy9k97i9i8gf4dxbmgvd03vrv59y0x47m11"; depends=[AnnotationDbi]; }; - org_Sc_sgd_db = derive2 { name="org.Sc.sgd.db"; version="3.4.0"; sha256="01zc0kx0jrmcwly4bb3cy69x3zm7mkrffzx720mwphn61gzngz3z"; depends=[AnnotationDbi]; }; - org_Sco_eg_db = derive2 { name="org.Sco.eg.db"; version="2.4.2"; sha256="1ppjl55059gk9jbh8c8xbsn2jlqz1hm650vm9gxnbd8hpnk63vgz"; depends=[AnnotationDbi]; }; - org_Ss_eg_db = derive2 { name="org.Ss.eg.db"; version="3.4.0"; sha256="17j0lvwp212zaxw5dx8488884v6b7l4hhzn2d14wisf8s3w1djig"; depends=[AnnotationDbi]; }; - org_Tgondii_eg_db = derive2 { name="org.Tgondii.eg.db"; version="1.0"; sha256="1vq3qbk6jswfffj5lfwsic71h8ga7a6gqf6wfa7qcda3gvfhnwlc"; depends=[AnnotationDbi]; }; - org_Xl_eg_db = derive2 { name="org.Xl.eg.db"; version="3.4.0"; sha256="1sbzmnxi9gvq3x86w6jw49qgzd7g58ilh1xmnvr840pz50b3n8j6"; depends=[AnnotationDbi]; }; + org_Ag_eg_db = derive2 { name="org.Ag.eg.db"; version="3.5.0"; sha256="0dzd281yi2vikzr4civf38wy8gpsdr9k2ks9j6sa2rnsnpf1hnh9"; depends=[AnnotationDbi]; }; + org_At_tair_db = derive2 { name="org.At.tair.db"; version="3.5.0"; sha256="1vpzciar4lwq5r8faz1mh9y085i71q0gcxz5c2gn9469qbi5ymmp"; depends=[AnnotationDbi]; }; + org_Bt_eg_db = derive2 { name="org.Bt.eg.db"; version="3.5.0"; sha256="1qcl4px85qhim5nndj4j1ajyvby8ldbr0g0pml2q54wnjs9f8a8f"; depends=[AnnotationDbi]; }; + org_Ce_eg_db = derive2 { name="org.Ce.eg.db"; version="3.5.0"; sha256="02ggchixlmzywhsbr0h2ms4dravv7m5964cjxqcjxqs16vjwlbk9"; depends=[AnnotationDbi]; }; + org_Cf_eg_db = derive2 { name="org.Cf.eg.db"; version="3.5.0"; sha256="0rdiffd9v6g6cwrd23jspj0bxyds9l977pv27azagw1f7bkdqgbk"; depends=[AnnotationDbi]; }; + org_Dm_eg_db = derive2 { name="org.Dm.eg.db"; version="3.5.0"; sha256="033qak1d3wwz17va0bh8z8p8arx0aw2va6gm1qfwsvdkj9cd9d7d"; depends=[AnnotationDbi]; }; + org_Dr_eg_db = derive2 { name="org.Dr.eg.db"; version="3.5.0"; sha256="0854rqanjzscvlq7rj6bvlxcfyhwiqwi4lnw7abzvv0zcwvf07i0"; depends=[AnnotationDbi]; }; + org_EcK12_eg_db = derive2 { name="org.EcK12.eg.db"; version="3.5.0"; sha256="0cydh8rj9r2g6wzs42sh6cf77fs0nrgww4jsy3x61aa0b8lngjxj"; depends=[AnnotationDbi]; }; + org_EcSakai_eg_db = derive2 { name="org.EcSakai.eg.db"; version="3.5.0"; sha256="00s7p7wrjd57wvwxyhb2m603kms2pm67rr3m83dp2s0pa4ffggmr"; depends=[AnnotationDbi]; }; + org_Gg_eg_db = derive2 { name="org.Gg.eg.db"; version="3.5.0"; sha256="1q5g9ka4fxjq5jp0mg6x8j44995y2r9hvs91qaan8xcmsa900q3q"; depends=[AnnotationDbi]; }; + org_Hs_eg_db = derive2 { name="org.Hs.eg.db"; version="3.5.0"; sha256="1v6wa5613cjq59xd7x1qz8lr9nb2abm9abl2cci1khrnrlpla927"; depends=[AnnotationDbi]; }; + org_Mm_eg_db = derive2 { name="org.Mm.eg.db"; version="3.5.0"; sha256="11q21p3ki4bn4hb3aix0g775l45l66jmas6m94nfhqqnpjhv4d6g"; depends=[AnnotationDbi]; }; + org_Mmu_eg_db = derive2 { name="org.Mmu.eg.db"; version="3.5.0"; sha256="13ia5ipyif6cxj4gmw4jl0j84iwj4289k69qgfm6qsw4xdc8amln"; depends=[AnnotationDbi]; }; + org_Pf_plasmo_db = derive2 { name="org.Pf.plasmo.db"; version="3.5.0"; sha256="08pldh0j1z9csbyzxn89xk9ir1av1dd4jbh79l04g4s34x13m8l8"; depends=[AnnotationDbi]; }; + org_Pt_eg_db = derive2 { name="org.Pt.eg.db"; version="3.5.0"; sha256="1sbimln1v575pxzsgx4sw5712nwfy8n188limrnhwg7brj893wrl"; depends=[AnnotationDbi]; }; + org_Rn_eg_db = derive2 { name="org.Rn.eg.db"; version="3.5.0"; sha256="11vnia08kblh3v4jypl6sw94p1n6702zskxj0gv4ijygaq61m5x4"; depends=[AnnotationDbi]; }; + org_Sc_sgd_db = derive2 { name="org.Sc.sgd.db"; version="3.5.0"; sha256="1h3wa5g65hg9fdg722w520gb6c16zgccg62vxgd37gj9bdnywg5w"; depends=[AnnotationDbi]; }; + org_Ss_eg_db = derive2 { name="org.Ss.eg.db"; version="3.5.0"; sha256="1wizm4dx6an2pfi322aykis41a6skhgv8yjyfl2pdi0kizlvw26c"; depends=[AnnotationDbi]; }; + org_Xl_eg_db = derive2 { name="org.Xl.eg.db"; version="3.5.0"; sha256="1rhz86d0ly7z79pbaf7s8kw1sx9ys8bawfrcgs33km2dd2cgzzi0"; depends=[AnnotationDbi]; }; paeg1acdf = derive2 { name="paeg1acdf"; version="2.18.0"; sha256="127pgxxp5wp3hgmafbzdzsk4gqnllq1m1gcsfyzkvpkvmbn4aa9n"; depends=[AnnotationDbi]; }; paeg1aprobe = derive2 { name="paeg1aprobe"; version="2.18.0"; sha256="0hbyd402wf9nzy2g93nhnf2zsi9jvhgfk0llxlyfk0kqxs0y4byy"; depends=[AnnotationDbi]; }; pd_081229_hg18_promoter_medip_hx1 = derive2 { name="pd.081229.hg18.promoter.medip.hx1"; version="0.99.4"; sha256="1h4925dmw0vfsnhllg55gswq3sxfmx9rcjzifdvgs9y27399psrr"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite]; }; @@ -830,10 +799,10 @@ in with self; { pd_zebrafish = derive2 { name="pd.zebrafish"; version="3.12.0"; sha256="0gg7y7w51pv0vf39qzyaf09wl3vxy222nr69zgxg7cylwxmaky7v"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; pedbarrayv10_db = derive2 { name="pedbarrayv10.db"; version="3.2.3"; sha256="01sn7qh5r2c2ph7gqirlzlplxscsmczf7ajffd9rsx59932f71kx"; depends=[AnnotationDbi org_Hs_eg_db]; }; pedbarrayv9_db = derive2 { name="pedbarrayv9.db"; version="3.2.3"; sha256="0x9m9m4nmdhc0j5244avmlfwljcpw0sh44l1b00cx05swi3vmjlp"; depends=[AnnotationDbi org_Hs_eg_db]; }; - phastCons100way_UCSC_hg19 = derive2 { name="phastCons100way.UCSC.hg19"; version="3.4.0"; sha256="1xkrm9s3x301g8kf0p60dcgx3irmsl8jfaayxbw3zgfyyr0nb1mw"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; }; - phastCons100way_UCSC_hg38 = derive2 { name="phastCons100way.UCSC.hg38"; version="3.4.0"; sha256="0d99mmih14s7mw0qsp2izdhi6fc59aamz160p0p9jpfbd8v4fz0g"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; }; - phastCons7way_UCSC_hg38 = derive2 { name="phastCons7way.UCSC.hg38"; version="3.4.0"; sha256="0r0wb1yj0ahkhql45n4jcqc2jgac5nshrjk3vn0w8sn80mxzialj"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; }; - pig_db0 = derive2 { name="pig.db0"; version="3.4.1"; sha256="1rkkbxk33nj8n2cijsh109xa49dw3b8hj05h396z0g6k2rflkxhx"; depends=[AnnotationDbi]; }; + phastCons100way_UCSC_hg19 = derive2 { name="phastCons100way.UCSC.hg19"; version="3.6.0"; sha256="09gnsrv37pzpbyx98vjcsi1kavazz4hkf7r48dggdad9lqg0fqnm"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; }; + phastCons100way_UCSC_hg38 = derive2 { name="phastCons100way.UCSC.hg38"; version="3.6.0"; sha256="1g0yd623sb73h3nf1mszchiyw5mk4dlz2h7mqix9d8xdsqmrc81l"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; }; + phastCons7way_UCSC_hg38 = derive2 { name="phastCons7way.UCSC.hg38"; version="3.6.0"; sha256="1p2kx6zrgc9yzkvmizzrlhhc75mnxpjgslpxm3kcmvsg12qd4zmz"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; }; + pig_db0 = derive2 { name="pig.db0"; version="3.5.0"; sha256="0xga9i0bicxbbc9rypwjw376qqg401smwwqjgkdgf4i5lrds0xi7"; depends=[AnnotationDbi]; }; plasmodiumanophelescdf = derive2 { name="plasmodiumanophelescdf"; version="2.18.0"; sha256="1vs36091djinn3g6rjhmy9xfdyi58365zbcjc9mf50adnp2i5fq9"; depends=[AnnotationDbi]; }; plasmodiumanophelesprobe = derive2 { name="plasmodiumanophelesprobe"; version="2.18.0"; sha256="03hfq51nrpmx8ihc48jiih6bk99irrgal9x7i7mgcv8xd508gcsy"; depends=[AnnotationDbi]; }; poplarcdf = derive2 { name="poplarcdf"; version="2.18.0"; sha256="0j28czs936j2wgwp63qbwl1mjcflcrx7ir88jzxkkw7411ch1gl1"; depends=[AnnotationDbi]; }; @@ -850,26 +819,26 @@ in with self; { rae230b_db = derive2 { name="rae230b.db"; version="3.2.3"; sha256="0rjs9lijabhxfrs6m9qri7a1c10zm1mxqx7bbip366cw069f5dx4"; depends=[AnnotationDbi org_Rn_eg_db]; }; rae230bcdf = derive2 { name="rae230bcdf"; version="2.18.0"; sha256="1j2i49cp042nk3rkf8q6gxcnwd5cihz1nyg8r6yndkja51r41pi8"; depends=[AnnotationDbi]; }; rae230bprobe = derive2 { name="rae230bprobe"; version="2.18.0"; sha256="1smqs93fks4rd5g9kk7cacnpsnj4rjr0d6fl2i01mdiihfi3csny"; depends=[AnnotationDbi]; }; - raex10stprobeset_db = derive2 { name="raex10stprobeset.db"; version="8.5.0"; sha256="15i8inp73n8acjrs6z0hk88lgzjrcqd9vr5cv4vnsdzmzbnhrxdd"; depends=[AnnotationDbi org_Rn_eg_db]; }; - raex10sttranscriptcluster_db = derive2 { name="raex10sttranscriptcluster.db"; version="8.5.0"; sha256="1r0rg2ifiswbf5a2zahm9823vnahii9s2vrhprbj87rbl7wm19xl"; depends=[AnnotationDbi org_Rn_eg_db]; }; - ragene10stprobeset_db = derive2 { name="ragene10stprobeset.db"; version="8.5.0"; sha256="0zywhbxajqcmfl90r95r2ghas4zrla92rjc5qa7vf57cas40pk1s"; depends=[AnnotationDbi org_Rn_eg_db]; }; - ragene10sttranscriptcluster_db = derive2 { name="ragene10sttranscriptcluster.db"; version="8.5.0"; sha256="1wiichdhfi20lav0vqi80jw0k8i6pbsrdlark8x397sn1acynn3q"; depends=[AnnotationDbi org_Rn_eg_db]; }; + raex10stprobeset_db = derive2 { name="raex10stprobeset.db"; version="8.7.0"; sha256="1i5f6ygg3jq6msqacd1npnvcb3pp5a1c95na7rdd3818h27pj4vf"; depends=[AnnotationDbi org_Rn_eg_db]; }; + raex10sttranscriptcluster_db = derive2 { name="raex10sttranscriptcluster.db"; version="8.7.0"; sha256="18y7fkpg34d18xczc5xz5hcigfkd4fxzlhd1cvfadxjhjyaj5fhk"; depends=[AnnotationDbi org_Rn_eg_db]; }; + ragene10stprobeset_db = derive2 { name="ragene10stprobeset.db"; version="8.7.0"; sha256="0ignrscm098xpnrp60lhnakgh4rwypzk6a5nh7miacxbs2mcy1lr"; depends=[AnnotationDbi org_Rn_eg_db]; }; + ragene10sttranscriptcluster_db = derive2 { name="ragene10sttranscriptcluster.db"; version="8.7.0"; sha256="12w77ajis8ll25knmjm8cvnxjlgpj6n7j66lmww21y7dvg33gwlr"; depends=[AnnotationDbi org_Rn_eg_db]; }; ragene10stv1cdf = derive2 { name="ragene10stv1cdf"; version="2.18.0"; sha256="0fm2yj6nn3v1wiscjb53hm4ylh5cgxvs7qgc9sbsbpv7agr0bzng"; depends=[AnnotationDbi]; }; ragene10stv1probe = derive2 { name="ragene10stv1probe"; version="2.18.0"; sha256="0cb3a908hixcakl41ay4yyfm9r97ln8gjidn4rs1hr7qaplfj1mh"; depends=[AnnotationDbi]; }; - ragene11stprobeset_db = derive2 { name="ragene11stprobeset.db"; version="8.5.0"; sha256="1qsrj2r0j4819rx2m6ahxz8fhpwz5cv6srysl585igipjy1caq43"; depends=[AnnotationDbi org_Rn_eg_db]; }; - ragene11sttranscriptcluster_db = derive2 { name="ragene11sttranscriptcluster.db"; version="8.5.0"; sha256="17np61fr5n545ilr4xlwsc559ni7rc38ns67x41lj6gnaz8cpmiy"; depends=[AnnotationDbi org_Rn_eg_db]; }; - ragene20stprobeset_db = derive2 { name="ragene20stprobeset.db"; version="8.5.0"; sha256="08g7wnfmxai9klscb7yywj6p8yfnid8px3qqwkn2s2r1iwi46azg"; depends=[AnnotationDbi org_Rn_eg_db]; }; - ragene20sttranscriptcluster_db = derive2 { name="ragene20sttranscriptcluster.db"; version="8.5.0"; sha256="09qcsbhl81j4wiz90fw6ldy97x821w72wywqik6rrsw1qhyaizkg"; depends=[AnnotationDbi org_Rn_eg_db]; }; - ragene21stprobeset_db = derive2 { name="ragene21stprobeset.db"; version="8.5.0"; sha256="15920i2wdyn5j0gn8nxdv1dvwhkmh1swzkazj5zqrg304xhrv1ki"; depends=[AnnotationDbi org_Rn_eg_db]; }; - ragene21sttranscriptcluster_db = derive2 { name="ragene21sttranscriptcluster.db"; version="8.5.0"; sha256="08gzlnbng7vhc3kw72lvrzp8f6799vr8b4c4vkdzwsrhd4hs60hf"; depends=[AnnotationDbi org_Rn_eg_db]; }; - rat_db0 = derive2 { name="rat.db0"; version="3.4.1"; sha256="0zzf91wbincgp75mwjx6q13xayb46giqv8vrz1wx8pmw2halqiy4"; depends=[AnnotationDbi]; }; + ragene11stprobeset_db = derive2 { name="ragene11stprobeset.db"; version="8.7.0"; sha256="0cc6cch0r2dlk689gsphcsf5ikbgyczslmq7r20q1cvgqxbzj6kp"; depends=[AnnotationDbi org_Rn_eg_db]; }; + ragene11sttranscriptcluster_db = derive2 { name="ragene11sttranscriptcluster.db"; version="8.7.0"; sha256="195dx0splkvdwqn4h6nvmm3zd0sv3vhcjz1bp1qxgi6d5iakvkry"; depends=[AnnotationDbi org_Rn_eg_db]; }; + ragene20stprobeset_db = derive2 { name="ragene20stprobeset.db"; version="8.7.0"; sha256="1p8qiqwxpkq2784ixzdd9pq38nrb4x8qwfmk5alr225br4vv0k2q"; depends=[AnnotationDbi org_Rn_eg_db]; }; + ragene20sttranscriptcluster_db = derive2 { name="ragene20sttranscriptcluster.db"; version="8.7.0"; sha256="135cgn92raa6f9yiw4k25rn04rpg5mdnf969l66x4s1jcc0rwscq"; depends=[AnnotationDbi org_Rn_eg_db]; }; + ragene21stprobeset_db = derive2 { name="ragene21stprobeset.db"; version="8.7.0"; sha256="0lp4prymrm3cp8yq1hba9bylw22hcvlx7piqpvjx51hj79yrwdig"; depends=[AnnotationDbi org_Rn_eg_db]; }; + ragene21sttranscriptcluster_db = derive2 { name="ragene21sttranscriptcluster.db"; version="8.7.0"; sha256="1b7s2r4w1yy2v3srs6n931zc64qf58nq4apmq2ag5nx50wspima1"; depends=[AnnotationDbi org_Rn_eg_db]; }; + rat_db0 = derive2 { name="rat.db0"; version="3.5.0"; sha256="09kbsaksmas6avcdlvbg6kvdw6cf156i7qip9l0mhv6qyqhl0p36"; depends=[AnnotationDbi]; }; rat2302_db = derive2 { name="rat2302.db"; version="3.2.3"; sha256="0vj4vkx091m34xqjh6gv6m2iqszvn5rq3kvnpyq3fin5v42wrsr1"; depends=[AnnotationDbi org_Rn_eg_db]; }; rat2302cdf = derive2 { name="rat2302cdf"; version="2.18.0"; sha256="1748rc6yypd7y8wgr1qg632pcsxx0fkxjz6b3z4fhblgdllhy9wk"; depends=[AnnotationDbi]; }; rat2302probe = derive2 { name="rat2302probe"; version="2.18.0"; sha256="1zwjgbcb9d4ib6z1iyjz8x11lq0b5gqs08y6j3idb5wf3i2p521v"; depends=[AnnotationDbi]; }; ratCHRLOC = derive2 { name="ratCHRLOC"; version="2.1.6"; sha256="0mgk6lwvvdwjzjh4r1q1q6nfnx4vqx9iy6gmbrb9f31jf30hqnsb"; depends=[]; }; rattoxfxcdf = derive2 { name="rattoxfxcdf"; version="2.18.0"; sha256="0q84lfaxnnj2zbm5q8xswa1md15fjj4i0djnqr835ixzn7px4yqn"; depends=[AnnotationDbi]; }; rattoxfxprobe = derive2 { name="rattoxfxprobe"; version="2.18.0"; sha256="1kp159553rkcn9yh6x3yph3yjz2ja21wi9j5ax03qnhwlsl1x8ik"; depends=[AnnotationDbi]; }; - reactome_db = derive2 { name="reactome.db"; version="1.58.0"; sha256="191bz92rr446g8w4m4wr9c51ykfqaj65vp7adb56wch7r8llawrl"; depends=[AnnotationDbi]; }; + reactome_db = derive2 { name="reactome.db"; version="1.62.0"; sha256="097na9ms80lxpc4qaagaqlxs7kjsjpkq649f2jqbav0mkph52bdh"; depends=[AnnotationDbi]; }; rgu34a_db = derive2 { name="rgu34a.db"; version="3.2.3"; sha256="1s2sd5bqlj4qhamhrnb9byxn8nc7z265mqy7zzkgxcd6a2k472vp"; depends=[AnnotationDbi org_Rn_eg_db]; }; rgu34acdf = derive2 { name="rgu34acdf"; version="2.18.0"; sha256="08z9f16xp1m2mwl9vlmbffxl4zyyl8cgzf6wp66rrm32lvl0nbwq"; depends=[AnnotationDbi]; }; rgu34aprobe = derive2 { name="rgu34aprobe"; version="2.18.0"; sha256="1gjxyq9128jgv3ic386f84rajgf3wz7yi2dja80y0ff4m0a48dlh"; depends=[AnnotationDbi]; }; @@ -883,7 +852,7 @@ in with self; { rgug4105a_db = derive2 { name="rgug4105a.db"; version="3.2.3"; sha256="0lq8k95qm0q7j65nf16p3f09dn9zs87n3k561wxrgi2lb0pf6j40"; depends=[AnnotationDbi org_Rn_eg_db]; }; rgug4130a_db = derive2 { name="rgug4130a.db"; version="3.2.3"; sha256="0zlcn9spw23bj3px9z1l2f5afn09zbr6rv0nbd2h6dd12wrvy1zk"; depends=[AnnotationDbi org_Rn_eg_db]; }; rgug4131a_db = derive2 { name="rgug4131a.db"; version="3.2.3"; sha256="1r272jf9cflf1yf4bznp4d59h7bd7adh1i3rf890h5ffc0xzf5cq"; depends=[AnnotationDbi org_Rn_eg_db]; }; - rhesus_db0 = derive2 { name="rhesus.db0"; version="3.4.1"; sha256="16p3zsx6sr466xzf0yd667an21br21n13agacsysf9g1vw4gc7cx"; depends=[AnnotationDbi]; }; + rhesus_db0 = derive2 { name="rhesus.db0"; version="3.5.0"; sha256="09i0f2ddss092awdmhshnndniyy3pzfj56nfbkgrj0y22lgfw875"; depends=[AnnotationDbi]; }; rhesuscdf = derive2 { name="rhesuscdf"; version="2.18.0"; sha256="0q2alkxm80wkzaf0q80df27q30qkswybavz05x6ywsihbs9h0nb8"; depends=[AnnotationDbi]; }; rhesusprobe = derive2 { name="rhesusprobe"; version="2.18.0"; sha256="0fd8pvwvpcmx41k80nbccjxllh39fvjf7l9dr8facisl1x7gsfil"; depends=[AnnotationDbi]; }; ri16cod_db = derive2 { name="ri16cod.db"; version="3.4.0"; sha256="1xz533vxjdyxx1wkks0kgk6b90sxs44iqcsvyds0xcm573bx8c6q"; depends=[AnnotationDbi org_Rn_eg_db]; }; @@ -892,8 +861,8 @@ in with self; { rnu34_db = derive2 { name="rnu34.db"; version="3.2.3"; sha256="0ahridq75rmjyaivmlhn428wg712zv3003cbzzrajm9w6nibbfgk"; depends=[AnnotationDbi org_Rn_eg_db]; }; rnu34cdf = derive2 { name="rnu34cdf"; version="2.18.0"; sha256="1snb89530zxdbsfs1vgw30b1wdc5sdr1q46bmvz5m9g57gyficr0"; depends=[AnnotationDbi]; }; rnu34probe = derive2 { name="rnu34probe"; version="2.18.0"; sha256="1rzjha1v453fxiwqs2zgwcbrvz6w96biz2jny0hrh5s86d5f6xpb"; depends=[AnnotationDbi]; }; - rta10probeset_db = derive2 { name="rta10probeset.db"; version="8.5.0"; sha256="039klpv3v3npb9i9pw4sjh2jwyv8ffk83360h41lxmmy17fdzlmh"; depends=[AnnotationDbi org_Rn_eg_db]; }; - rta10transcriptcluster_db = derive2 { name="rta10transcriptcluster.db"; version="8.5.0"; sha256="0q0szasa6c1klhhzdp08sv598m7njf1xql9h710xajbyksq0accy"; depends=[AnnotationDbi org_Rn_eg_db]; }; + rta10probeset_db = derive2 { name="rta10probeset.db"; version="8.7.0"; sha256="02hcq8zflfixiqwsjr7bsllcqh3hh910n00hzlqry07mwwxbv356"; depends=[AnnotationDbi org_Rn_eg_db]; }; + rta10transcriptcluster_db = derive2 { name="rta10transcriptcluster.db"; version="8.7.0"; sha256="1al9npm4skccr7369gpg0hxsw3nmngsl6z06c27n3ymdavsd2dyj"; depends=[AnnotationDbi org_Rn_eg_db]; }; rtu34_db = derive2 { name="rtu34.db"; version="3.2.3"; sha256="119l36gbzdi52na2lkjbpb5r2d9pp5rz2zpzfj7isw07an6h8wmh"; depends=[AnnotationDbi org_Rn_eg_db]; }; rtu34cdf = derive2 { name="rtu34cdf"; version="2.18.0"; sha256="10f5wnvk820c8brl2qqs7mv6jcn1v6pmz680kvlpyz9s2sz16936"; depends=[AnnotationDbi]; }; rtu34probe = derive2 { name="rtu34probe"; version="2.18.0"; sha256="0mcp9lmc65j3ds73gyak72pkshnx6km0d2cm324yaxlp9bqzfchw"; depends=[AnnotationDbi]; }; @@ -920,8 +889,8 @@ in with self; { vitisviniferaprobe = derive2 { name="vitisviniferaprobe"; version="2.18.0"; sha256="1ggz1s37dwvrkhj4vx2civyhap7bgqsshy33lk14z4fjsayfi39a"; depends=[AnnotationDbi]; }; wheatcdf = derive2 { name="wheatcdf"; version="2.18.0"; sha256="1gmbrdilqvm54h6nkb1cm01ki8aipiywd4qj8gpwlm2hqrimr8kr"; depends=[AnnotationDbi]; }; wheatprobe = derive2 { name="wheatprobe"; version="2.18.0"; sha256="1fifi3pvzdrg356idwz0kx7qlf5mssdxlyvwpn3cjgw0z7n7cnw8"; depends=[AnnotationDbi]; }; - worm_db0 = derive2 { name="worm.db0"; version="3.4.1"; sha256="0r76ck6b2zkf38z59n9m3frc2d6v27frrbryvyk6lv4bnnwa1p2n"; depends=[AnnotationDbi]; }; - xenopus_db0 = derive2 { name="xenopus.db0"; version="3.4.1"; sha256="0953cf597hxd2h28p7bqrv5xxs96y3bxr4x1hp8bm1v0l8l37d13"; depends=[AnnotationDbi]; }; + worm_db0 = derive2 { name="worm.db0"; version="3.5.0"; sha256="05r29cqswz3ph3adymdigayv5ci19cd02y26kjbgwrh38xha5cg0"; depends=[AnnotationDbi]; }; + xenopus_db0 = derive2 { name="xenopus.db0"; version="3.5.0"; sha256="136yrk7qlbzy717xy1abpn5l42j0qzal72y0p20wwxw60xhpx1rv"; depends=[AnnotationDbi]; }; xenopuslaeviscdf = derive2 { name="xenopuslaeviscdf"; version="2.18.0"; sha256="1bcz1hr7gxw6ac4qvw0giph6hfcf5i9b11s274ypq512qc1d32iq"; depends=[AnnotationDbi]; }; xenopuslaevisprobe = derive2 { name="xenopuslaevisprobe"; version="2.18.0"; sha256="0prb14zn2gvgxq8w0y21x1ng51cn3bgjhkppf7zkmnq1xkzvq0pw"; depends=[AnnotationDbi]; }; xlaevis_db = derive2 { name="xlaevis.db"; version="3.2.3"; sha256="0cdi71c8pflb8n4yfxc0wmfi51w6z0dlz7nw5hv0hkx547v79d53"; depends=[AnnotationDbi org_Xl_eg_db]; }; @@ -933,7 +902,7 @@ in with self; { ye6100subbcdf = derive2 { name="ye6100subbcdf"; version="2.18.0"; sha256="1169hv56981b915rlr5w5sn6ppyjd8as7f4k1hbjzadrdrl3glwp"; depends=[AnnotationDbi]; }; ye6100subccdf = derive2 { name="ye6100subccdf"; version="2.18.0"; sha256="0mhr4zd33gfvvivc17k7fb6nvmhq6h3q0xbx2zl09zd6qk09kizm"; depends=[AnnotationDbi]; }; ye6100subdcdf = derive2 { name="ye6100subdcdf"; version="2.18.0"; sha256="11b1fflgc34lrj4yf1p7way5n83cm9c7znsbxpzlwddwyy8qib30"; depends=[AnnotationDbi]; }; - yeast_db0 = derive2 { name="yeast.db0"; version="3.4.1"; sha256="0d9p474891jshxynmwa63xg7kb01s6vb1dll3hns9ps0bpm6d8r3"; depends=[AnnotationDbi]; }; + yeast_db0 = derive2 { name="yeast.db0"; version="3.5.0"; sha256="00rp099g5302hy4g4h6j11nslc2j6p58ax80mnswhzvfr37sb99f"; depends=[AnnotationDbi]; }; yeast2_db = derive2 { name="yeast2.db"; version="3.2.3"; sha256="1xns0129ifklipbardybkjyxfwnlklavq0k6s15wk2iwk7vxa33s"; depends=[AnnotationDbi org_Sc_sgd_db]; }; yeast2cdf = derive2 { name="yeast2cdf"; version="2.18.0"; sha256="0c68val9x8bfnv4xx0vag9dxwsx5q8dzbj0dpha3nshh12jw48w9"; depends=[AnnotationDbi]; }; yeast2probe = derive2 { name="yeast2probe"; version="2.18.0"; sha256="125nif693qcmxc0nnnz917f9avggcdr8g9rfvx2qdc54a2l7vdb7"; depends=[AnnotationDbi]; }; @@ -942,7 +911,7 @@ in with self; { ygs98frmavecs = derive2 { name="ygs98frmavecs"; version="1.3.0"; sha256="1xrm1209xnknwvad7nvg1a0mbxz15z12yd4x5bia3cq03zcmzf9m"; depends=[]; }; ygs98probe = derive2 { name="ygs98probe"; version="2.18.0"; sha256="0awf6z4j2vb2jk9a9j2r512yd3m31660y68pasa9mp488m270a3q"; depends=[AnnotationDbi]; }; zebrafish_db = derive2 { name="zebrafish.db"; version="3.2.3"; sha256="1n6p04hlm5c32fnficx294s7n7izy5460avagw8hx1g5xryhdzqk"; depends=[AnnotationDbi org_Dr_eg_db]; }; - zebrafish_db0 = derive2 { name="zebrafish.db0"; version="3.4.1"; sha256="12a1qk7wjjsclrj2nbf02hwk9pakzkgzgy4l2893bnwyf0c30ffb"; depends=[AnnotationDbi]; }; + zebrafish_db0 = derive2 { name="zebrafish.db0"; version="3.5.0"; sha256="1mkyhf1vz0n98zs941v5f7nl0cg0s873ny3m6vdpj5c9nyqc8hxs"; depends=[AnnotationDbi]; }; zebrafishcdf = derive2 { name="zebrafishcdf"; version="2.18.0"; sha256="0sq1xqhblbilvaiabhqyl9gxdj3jg576vgq8v0cls1zvvx0isrx0"; depends=[AnnotationDbi]; }; zebrafishprobe = derive2 { name="zebrafishprobe"; version="2.18.0"; sha256="1pb8z2rdhq11hq391xyi236scyafbp56kbhhwsnha36yygz5drw0"; depends=[AnnotationDbi]; }; } diff --git a/pkgs/development/r-modules/bioc-experiment-packages.nix b/pkgs/development/r-modules/bioc-experiment-packages.nix index fe446610c4eb..220ac60486b8 100644 --- a/pkgs/development/r-modules/bioc-experiment-packages.nix +++ b/pkgs/development/r-modules/bioc-experiment-packages.nix @@ -4,314 +4,332 @@ # Rscript generate-r-packages.R bioc-experiment >new && mv new bioc-experiment-packages.nix { self, derive }: -let derive2 = derive { rVersion = "3.4"; }; +let derive2 = derive { biocVersion = "3.6"; }; in with self; { - ABAData = derive2 { name="ABAData"; version="1.4.0"; sha256="1xlr9ps6s6xy95wh4c0m09rl2hkp9rms2gbfgsf0y46j1jak4ick"; depends=[]; }; - ALL = derive2 { name="ALL"; version="1.16.0"; sha256="01b0ksakw06l8q9a1ihb56sm0p8v78d2n4aji8yj1nnfi2kcgr3m"; depends=[Biobase]; }; - ALLMLL = derive2 { name="ALLMLL"; version="1.14.0"; sha256="1hza3ckxlc9k6mrdxc94r8yrsnj51ywcpinslrfyhanibrjvi8yc"; depends=[affy]; }; - ARRmData = derive2 { name="ARRmData"; version="1.10.0"; sha256="0f5my7jbp0x8r7hcj5rvnfa3swxh39apfby7rlqmkznr175jmsa8"; depends=[]; }; - Affyhgu133A2Expr = derive2 { name="Affyhgu133A2Expr"; version="1.10.0"; sha256="038yspp7l837i8lqv99alj1jsb51b27c84m4nvglpy3pzwvbqda7"; depends=[]; }; - Affyhgu133Plus2Expr = derive2 { name="Affyhgu133Plus2Expr"; version="1.8.0"; sha256="070iv3jschvz36fa6q8d4s6prlbmwj4m07f69yhfv4mlb30nz6gk"; depends=[]; }; - Affyhgu133aExpr = derive2 { name="Affyhgu133aExpr"; version="1.12.0"; sha256="1z6bn6sqdqd152gn2bzppy6g57n281mwmp5vvv901mb3w1i3yvgl"; depends=[]; }; - AffymetrixDataTestFiles = derive2 { name="AffymetrixDataTestFiles"; version="0.12.0"; sha256="0dqbf9rvha6cq0ipf9rjwx6akmcapsrh1k2p5kws3i0i2nw2kr3v"; depends=[]; }; - Affymoe4302Expr = derive2 { name="Affymoe4302Expr"; version="1.12.0"; sha256="1yx8pri6zdvv4hr4w43axb10d1y2bmqfp5mhhn9j286wxal7qgh0"; depends=[]; }; - AmpAffyExample = derive2 { name="AmpAffyExample"; version="1.14.0"; sha256="0prmpqyklxl47wna3kdh27bnrw9saa0s48xidmybs1nzgvizs5s4"; depends=[affy]; }; - AneuFinderData = derive2 { name="AneuFinderData"; version="1.2.0"; sha256="1bcr57mpvvxlryrhcpwzagv9gdirhfdmyc4rsv6giixqsj2d2m9v"; depends=[]; }; - AshkenazimSonChr21 = derive2 { name="AshkenazimSonChr21"; version="1.4.0"; sha256="0hc5zqdajra3qy76z65qccllksz268vpnrn35232zp6w3i1zljx6"; depends=[]; }; - BeadArrayUseCases = derive2 { name="BeadArrayUseCases"; version="1.12.0"; sha256="1dvy6bg0949cx12smpzkndh1mq32jy0hfq7aaiixziqbxb32gggm"; depends=[beadarray GEOquery limma]; }; - CCl4 = derive2 { name="CCl4"; version="1.12.0"; sha256="19f1zmicl6i90l11sq6ly9913v2913s37c5jz5341p822shf8knz"; depends=[Biobase limma]; }; - CLL = derive2 { name="CLL"; version="1.14.0"; sha256="078avwbs42nnaqxa1k4769rgxign1xmwv2s1irjgd9dkxqq2ha0n"; depends=[affy Biobase]; }; - COHCAPanno = derive2 { name="COHCAPanno"; version="1.10.0"; sha256="1jf4wrbwbzbn4rwjkn936zg1cddd1s96a8m8r9bx2z2zm49vc5bp"; depends=[]; }; - CONFESSdata = derive2 { name="CONFESSdata"; version="1.2.0"; sha256="0p8v2qxg2hj1q3r8pwpp46zfbwjyiilq85kmzxl8v2flcw9n3brv"; depends=[]; }; - COPDSexualDimorphism_data = derive2 { name="COPDSexualDimorphism.data"; version="1.10.0"; sha256="1yd8k5pacs37yvb1bbpb46h9s3h1r8kb01r1hiwr73m1rbsg3qdl"; depends=[]; }; - COSMIC_67 = derive2 { name="COSMIC.67"; version="1.10.0"; sha256="0mw0q9s2dsqvc5qb5p57624raki7dgs0qc1anr2vaw1pi1gvfgib"; depends=[GenomicRanges SummarizedExperiment VariantAnnotation]; }; - CRCL18 = derive2 { name="CRCL18"; version="0.108.0"; sha256="12m13kv1f1cxynlar59m5s0ihz92ff52j80dqz5m8dzsynbjckbz"; depends=[Biobase]; }; - CardinalWorkflows = derive2 { name="CardinalWorkflows"; version="1.6.0"; sha256="0zjc5h348h94h2vm926z592f1zibv000nvx039662ydhsxn58mp2"; depends=[Cardinal]; }; - CellMapperData = derive2 { name="CellMapperData"; version="1.0.0"; sha256="12nkc500mqzfrg5yksfwf4f4kv2flk4l7lxx6ws0kw2hgrnm9yz1"; depends=[CellMapper ExperimentHub]; }; - ChAMPdata = derive2 { name="ChAMPdata"; version="2.6.0"; sha256="1hkwwkz2k4dnsl2sshr33as16x0dh98xvsnpf0zll2vkjkjw44v4"; depends=[BiocGenerics GenomicRanges]; }; - ChIPXpressData = derive2 { name="ChIPXpressData"; version="1.12.0"; sha256="1hb4ay5a9z2c5zmjhlbbkcbycvmk27qimrpb6rvxkh3lprap2lv2"; depends=[bigmemory]; }; - ChimpHumanBrainData = derive2 { name="ChimpHumanBrainData"; version="1.12.0"; sha256="0wg9bsb1264wif23rqv2c863rr72crxb4n640q37ayf5zw7p6jgh"; depends=[affy hexbin limma qvalue statmod]; }; - ConnectivityMap = derive2 { name="ConnectivityMap"; version="1.10.0"; sha256="0v34kfkdpw8zmg1hkxbdjvk58m18ldxvsirz7s3i2vaf8k1g4r53"; depends=[]; }; - CopyNumber450kData = derive2 { name="CopyNumber450kData"; version="1.10.0"; sha256="1rblm57ljkq1dmzsbcmwm6p9gp0mgpgm2bbjczy0dppbhhr34m2c"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; }; - CopyhelpeR = derive2 { name="CopyhelpeR"; version="1.6.0"; sha256="0x7cyynjmxls9as2gg0iyp9x5fpalxmdjq914ss7i84i9zyk5bhq"; depends=[]; }; - DAPARdata = derive2 { name="DAPARdata"; version="1.2.0"; sha256="1pc26xa2hx6vsl0xpfwhrgvnnrbxgr5cnzpygayrzh3hs4ryi987"; depends=[knitr MSnbase]; }; - DLBCL = derive2 { name="DLBCL"; version="1.14.0"; sha256="0baxgyvy07k502ndf81p2v51wrlb1p9fy0zxlx6faf0g80kghx7l"; depends=[Biobase]; }; - DMRcatedata = derive2 { name="DMRcatedata"; version="1.10.1"; sha256="10z534ffv975x08hxdfv871lm1ngg9qmgakfhamqcdlbc02y1j93"; depends=[GenomicRanges]; }; - DREAM4 = derive2 { name="DREAM4"; version="1.10.0"; sha256="0swyywaja7cfvn370wx6cbh5pda724v3rd5iy4rhvm7i1pg3m4l7"; depends=[SummarizedExperiment]; }; - DeSousa2013 = derive2 { name="DeSousa2013"; version="1.10.0"; sha256="0hx68nzhjb7sqrc2zzn37n0aby388bvbxr6ads7k9rckz50lha19"; depends=[affy AnnotationDbi Biobase cluster ConsensusClusterPlus frma frmaTools gplots hgu133plus2_db hgu133plus2frmavecs pamr rgl ROCR siggenes survival sva]; }; - DmelSGI = derive2 { name="DmelSGI"; version="1.6.0"; sha256="0n3ald8rg5yp5a27bwdfhdrl0rns50bmn7yi3z38qcvk6iiq9v70"; depends=[abind gplots igraph knitr limma rhdf5 TSP]; }; - DonaPLLP2013 = derive2 { name="DonaPLLP2013"; version="1.12.0"; sha256="0944p9gk4vazb2gqn5s2mij0b2vyvgs050h61d1g2iv11156wc6v"; depends=[EBImage]; }; - DrugVsDiseasedata = derive2 { name="DrugVsDiseasedata"; version="1.10.0"; sha256="0vvzvxkvg6l0q143jjh74mx4xam3q4xc9wlxbl693aipz0kpicql"; depends=[]; }; - DvDdata = derive2 { name="DvDdata"; version="1.10.0"; sha256="0rz5yhfcammg17rx15dnkcg43cwqbwi8ipkkqmlfkr3kb4km731v"; depends=[]; }; - EGSEAdata = derive2 { name="EGSEAdata"; version="1.2.0"; sha256="1rm3yjsngjrn86l2rdx0cz1kz9ki8h16znhag854l9yfahh9sr35"; depends=[]; }; - ELMER_data = derive2 { name="ELMER.data"; version="1.4.0"; sha256="0l12m881b5j0i7dw2wz868p0mqlfgfz3y5yyhj6kyzvwaj677p0a"; depends=[GenomicRanges]; }; - EatonEtAlChIPseq = derive2 { name="EatonEtAlChIPseq"; version="0.12.0"; sha256="16q9f1p21xdh00mzb3vc2zpmyry9cfb884y2vp60gpq930vs3fsj"; depends=[GenomicRanges rtracklayer ShortRead]; }; - FANTOM3and4CAGE = derive2 { name="FANTOM3and4CAGE"; version="1.10.0"; sha256="0k0wajjj340wpc3zlcd9kylllfa3ly5cbfg8i38dc5g88hz5nvkr"; depends=[]; }; - FIs = derive2 { name="FIs"; version="1.2.0"; sha256="0hw83rnb5bl4a390h2x413zlss52bkbmfyq0md69zx1rlvxpdprp"; depends=[]; }; - Fletcher2013a = derive2 { name="Fletcher2013a"; version="1.10.0"; sha256="14ph3ll6xli84bpg9s43hmigwbnyprzfgmr4yifw77ssqkj0r3wx"; depends=[Biobase gplots limma VennDiagram]; }; - Fletcher2013b = derive2 { name="Fletcher2013b"; version="1.10.0"; sha256="1wilz0mwizar8491wkym5x3xwxfxmyd9r1djh3xnc9gnq88df0dy"; depends=[Fletcher2013a igraph RColorBrewer RedeR RTN]; }; - FlowSorted_Blood_450k = derive2 { name="FlowSorted.Blood.450k"; version="1.12.0"; sha256="0q06szq9vs46frgax6896wkrxw5rb89854vnib68kaxkmyqrs4rp"; depends=[minfi]; }; - FlowSorted_CordBlood_450k = derive2 { name="FlowSorted.CordBlood.450k"; version="1.2.0"; sha256="1d4caj4zrjlwkpbiclqxjyzzz3vg97p61hkmrxa18hbq8v9c67z1"; depends=[minfi]; }; - FlowSorted_CordBloodNorway_450k = derive2 { name="FlowSorted.CordBloodNorway.450k"; version="1.0.0"; sha256="0z966py4bgxnifly56mlyqvi5v4mh1ay5nhfb7fd9qciq42jclzf"; depends=[minfi]; }; - FlowSorted_DLPFC_450k = derive2 { name="FlowSorted.DLPFC.450k"; version="1.10.0"; sha256="1dgaylgx19cbvvcrdr3wwr9rp3jdx89mlxzc4fivnzllmf1dyyqa"; depends=[minfi]; }; - FunciSNP_data = derive2 { name="FunciSNP.data"; version="1.10.0"; sha256="0r0iv8hp25ld9vpyij9lrk0xphaxcz4j4panyc83i18d6s9jw51s"; depends=[IRanges rtracklayer]; }; - GGdata = derive2 { name="GGdata"; version="1.12.0"; sha256="0h564577s3aklgg2a34026nacfzq3mpfmwmsl19dcmk7all5i100"; depends=[AnnotationDbi Biobase GGBase illuminaHumanv1_db snpStats]; }; - GSBenchMark = derive2 { name="GSBenchMark"; version="0.108.0"; sha256="13lc52xdv0mk4mr54i33k8rwb19496f8g8dj7xhh9vvx3dkcrl5k"; depends=[]; }; - GSE62944 = derive2 { name="GSE62944"; version="1.2.0"; sha256="0y8f1cq8bwkjr79vias3snclqcddd8bmh3rl041s4pv5adxgddgn"; depends=[Biobase GEOquery]; }; - GSVAdata = derive2 { name="GSVAdata"; version="1.10.0"; sha256="0lbh07ygyns6db3g0208691q7ry0mjg2lhis4pqw6rr122mvhh4l"; depends=[Biobase GSEABase hgu95a_db]; }; - GWASdata = derive2 { name="GWASdata"; version="1.12.0"; sha256="0ygkrm7gybfj4wb8rc56zrwyfbpgl1kz50dyrz5glwkgzxqn00dq"; depends=[GWASTools]; }; - GeuvadisTranscriptExpr = derive2 { name="GeuvadisTranscriptExpr"; version="1.2.0"; sha256="0jlmkqkjrffspny20w6yci319ry63sjnsychz6z9gwacy72fz14y"; depends=[]; }; - HD2013SGI = derive2 { name="HD2013SGI"; version="1.14.0"; sha256="0whm9irlfmjamsjcjbxb1c574g60iscx10f498l9vh857iv1q8vl"; depends=[EBImage geneplotter gplots limma LSD RColorBrewer splots vcd]; }; - HEEBOdata = derive2 { name="HEEBOdata"; version="1.12.0"; sha256="1j79sxx3ig61ny8r0j40m4fba5rf61k8rq23b5w6rcq6zwysymh6"; depends=[]; }; - HIVcDNAvantWout03 = derive2 { name="HIVcDNAvantWout03"; version="1.14.0"; sha256="0h42jvnmfdr14glnlspgiznxx5qh19pn6abw4qyf2q24yps5hrpd"; depends=[]; }; - HSMMSingleCell = derive2 { name="HSMMSingleCell"; version="0.108.0"; sha256="0i48h84qpcwraj8rhmisk6g7l6m9wf5a4p5pl6kr0ipfpr6fnh2b"; depends=[]; }; - HarmanData = derive2 { name="HarmanData"; version="1.2.0"; sha256="0xlqp2fx8glhykdnc38mjsxjc78bb3q72jx168djq2r0z3gxivai"; depends=[]; }; - HelloRangesData = derive2 { name="HelloRangesData"; version="1.0.0"; sha256="0lcmww0pyx3pjqnhvkdz9zv5s0cbrgxd7hvf0fz7hkcqn3sdw2p6"; depends=[]; }; - HiCDataHumanIMR90 = derive2 { name="HiCDataHumanIMR90"; version="0.108.0"; sha256="1sw1i7i5hi1kx7h9nqbnxb6h4wl97yfirsfw4m9sb879ycbwq58p"; depends=[]; }; - HiCDataLymphoblast = derive2 { name="HiCDataLymphoblast"; version="1.10.0"; sha256="1mka0is34lxg7cyrsdahkm11xnvlz17qk7bs8bwlkxc7gz90aj3j"; depends=[]; }; - Hiiragi2013 = derive2 { name="Hiiragi2013"; version="1.10.0"; sha256="0lirsd1875v3qkmszj2pbaj8r552ndlvxhfhbl62rwsia5g5i356"; depends=[affy Biobase boot clue cluster genefilter geneplotter gplots gtools KEGGREST lattice latticeExtra MASS mouse4302_db RColorBrewer xtable]; }; - HumanAffyData = derive2 { name="HumanAffyData"; version="1.0.0"; sha256="03cxc5bs8q27n8jrclnndgw02mjqf9wn4gc8z39x2bd4gwhjjvpv"; depends=[Biobase ExperimentHub]; }; - IHWpaper = derive2 { name="IHWpaper"; version="1.2.0"; sha256="0d0rns36wb57vizgmjwsjmgb3qgp8ng31d81n1z0wzhdwrdir9vv"; depends=[Biobase BiocGenerics BiocParallel cowplot DESeq2 dplyr fdrtool genefilter ggplot2 IHW qvalue Rcpp SummarizedExperiment]; }; - ITALICSData = derive2 { name="ITALICSData"; version="2.12.0"; sha256="1l3xvgav4k3d5xn0wa0046dx2i395gndvwh8ni1452dx98wj8xlw"; depends=[]; }; - Illumina450ProbeVariants_db = derive2 { name="Illumina450ProbeVariants.db"; version="1.10.0"; sha256="17mcl8850pzfr5lmdis8659kfbfy63qgp61h3wrd1nbqn0skk5q8"; depends=[]; }; - IlluminaDataTestFiles = derive2 { name="IlluminaDataTestFiles"; version="1.12.0"; sha256="1d4ycz9di7nqqpf2kcjaldg49s8jfvyfgb5q5i1ni68grzfi6p4k"; depends=[]; }; - Iyer517 = derive2 { name="Iyer517"; version="1.16.0"; sha256="0gs7793q5zbgiynpvkq46l0yc862sfy87090jkvw1m6mlci89qkk"; depends=[Biobase]; }; - JASPAR2014 = derive2 { name="JASPAR2014"; version="1.10.0"; sha256="1cbqrn54fb7jqfaswlvq4ljshfwg08ra07sh1g4dpv0nb2kkgv18"; depends=[Biostrings]; }; - JASPAR2016 = derive2 { name="JASPAR2016"; version="1.2.0"; sha256="0j0ilzml2i0j7bql2qly14h1xnrvdar65fkaxkvv2ncbyxgisiky"; depends=[]; }; - JctSeqData = derive2 { name="JctSeqData"; version="1.4.0"; sha256="0gw78wm9s8mz87zidfm49ly79gws8xfd7y4my4k39l1caqhlzbdd"; depends=[]; }; - KEGGandMetacoreDzPathwaysGEO = derive2 { name="KEGGandMetacoreDzPathwaysGEO"; version="0.108.0"; sha256="1q209v42ncczqwfmc71i0s3x6axlzqi3k474xccnhpsxcaz3s0a6"; depends=[Biobase BiocGenerics]; }; - KEGGdzPathwaysGEO = derive2 { name="KEGGdzPathwaysGEO"; version="1.12.0"; sha256="05mplbzvwfqnn8ffdha1s99bhkq537vsmk46zq217cn0cl4csqrl"; depends=[Biobase BiocGenerics]; }; - KOdata = derive2 { name="KOdata"; version="1.0.0"; sha256="1ggr9ayhz3h2x7g4n3l3pnnhdznw1iyp45n8sixp90ha9133hv9b"; depends=[]; }; - LiebermanAidenHiC2009 = derive2 { name="LiebermanAidenHiC2009"; version="0.12.0"; sha256="101xq53ra360fhifn274nmdsbbj7pralhhgzzy0pr00a48x68lwc"; depends=[IRanges KernSmooth]; }; - ListerEtAlBSseq = derive2 { name="ListerEtAlBSseq"; version="1.6.0"; sha256="05g6qn1zkbk6daps9nnzqnn748qxda0avi2mbzsrcfqp231dkhs8"; depends=[methylPipe]; }; - LungCancerACvsSCCGEO = derive2 { name="LungCancerACvsSCCGEO"; version="1.10.0"; sha256="13x5hj6503aavyv4bygf26krvj8ppwaalrhizwylkdn4zglv4nv1"; depends=[]; }; - LungCancerLines = derive2 { name="LungCancerLines"; version="0.12.0"; sha256="1xsas3d0n6h5xy03ybqy82cfh1gq97lim33mi163j598yhd1c6zs"; depends=[Rsamtools]; }; - M3DExampleData = derive2 { name="M3DExampleData"; version="1.0.0"; sha256="07awll0dmi7wnr5w7nc89g1mqf6b9r2mw858x0vzwkwf58qixqh0"; depends=[]; }; - MAQCsubset = derive2 { name="MAQCsubset"; version="1.12.0"; sha256="1gngz2a17n4lmcy59wcxywlgarp9h985wzmxz59vymx9n3in5lj5"; depends=[affy Biobase lumi]; }; - MAQCsubsetAFX = derive2 { name="MAQCsubsetAFX"; version="1.12.0"; sha256="1ic7xdlfw0mikgmq961dc58sqfiyq2464q9w49hblcl25gf2pxi0"; depends=[affy Biobase]; }; - MAQCsubsetILM = derive2 { name="MAQCsubsetILM"; version="1.12.0"; sha256="1jiydpacyvdvlynlhcqrnc9xysbvn755lzrcz8pm2h79wanpcpsp"; depends=[Biobase lumi]; }; - MEALData = derive2 { name="MEALData"; version="1.4.0"; sha256="01pn75kkvk6w1xim9hwqqpjv9gb1g7a4f4110hhllabhih3ygjlv"; depends=[]; }; - MEDIPSData = derive2 { name="MEDIPSData"; version="1.10.0"; sha256="1vdmh5rlygjmrkzy599rcr90anci3dzzz666b87b2w3z04vvyyqp"; depends=[]; }; - MEEBOdata = derive2 { name="MEEBOdata"; version="1.12.0"; sha256="0c4b69dhpkxarbna63dzacm81kizfdm425xmcb4xs0zs6jv6kj4j"; depends=[]; }; - MMDiffBamSubset = derive2 { name="MMDiffBamSubset"; version="1.10.0"; sha256="0yilicgglvb22gl5zv7rdjc5yczfz7kvzysnajb0qgpw94ha1wjx"; depends=[]; }; - MSBdata = derive2 { name="MSBdata"; version="0.12.0"; sha256="1g0piddp8qpqf8nncsv73zymad5qmf2hxam44sn1m6227m4r8xdc"; depends=[]; }; - MUGAExampleData = derive2 { name="MUGAExampleData"; version="0.108.0"; sha256="0hw4f6syk1m4zxr423cx7asahq1lkbi7pnhspda7m5127fs5ikxa"; depends=[]; }; - MethylAidData = derive2 { name="MethylAidData"; version="1.6.0"; sha256="1ws6vn9pg1hmcyajrvyg645glj2khg43v75ppn72ylfysx8h86yl"; depends=[MethylAid]; }; - Mulder2012 = derive2 { name="Mulder2012"; version="0.14.0"; sha256="0ah5digpg8j3dwhqx0gqf0r46vwpqmglk89k4h504vn18ff99vbi"; depends=[HTSanalyzeR igraph KEGG_db MASS org_Hs_eg_db PANR pvclust RedeR]; }; - NCIgraphData = derive2 { name="NCIgraphData"; version="1.10.0"; sha256="1pdm201xvhhbdd2blrg2yxjhm00pqvkxk0x1saykb6rrdq2zl16w"; depends=[]; }; - NGScopyData = derive2 { name="NGScopyData"; version="0.108.0"; sha256="0bk50jfmbq8p8c81jmcy85xqnqrw2amsa3f7hdnkj36k2gmqzzyf"; depends=[]; }; - Neve2006 = derive2 { name="Neve2006"; version="0.12.0"; sha256="0s0brv5k92bhls8flbq8qbxs53gnsgibr9mqb3jkhjz039ir749s"; depends=[annotate Biobase hgu133a_db]; }; - PCHiCdata = derive2 { name="PCHiCdata"; version="1.2.0"; sha256="1bksxvax6j9wxjszkq0cx7jx84i14qb9dqlgjahjr559slkqbzmh"; depends=[Chicago]; }; - PGPC = derive2 { name="PGPC"; version="1.2.0"; sha256="0im1s07l3rbcwmglm1vw5yq8qp307bbbkij851cbs639wlq7s22w"; depends=[ChemmineR EBImage geneplotter ggplot2 gplots imageHTS limma plyr RColorBrewer reshape2 SearchTrees splots]; }; - PREDAsampledata = derive2 { name="PREDAsampledata"; version="0.14.1"; sha256="0p898qdp5fnfads1n6rlwi6c2zp332m0jqdw21fsr3lx59d3s8jv"; depends=[affy annotate Biobase gahgu133plus2_db gahgu133plus2cdf PREDA]; }; - PWMEnrich_Dmelanogaster_background = derive2 { name="PWMEnrich.Dmelanogaster.background"; version="4.8.0"; sha256="19b2q9p76cyjl8dgmjagdr9zxr2xfinpp4qr26772s7bsxwq0rll"; depends=[PWMEnrich]; }; - PWMEnrich_Hsapiens_background = derive2 { name="PWMEnrich.Hsapiens.background"; version="4.8.0"; sha256="0g2mjiyv415n0cl0nrj5va61f5pf9wdv27q92xsbzp0fgybjd4hy"; depends=[PWMEnrich]; }; - PWMEnrich_Mmusculus_background = derive2 { name="PWMEnrich.Mmusculus.background"; version="4.8.0"; sha256="0zhrvynj3my4pdd57nybw62jkaqm039i7vm9v253qzdaf8h0xs3w"; depends=[PWMEnrich]; }; - PasillaTranscriptExpr = derive2 { name="PasillaTranscriptExpr"; version="1.2.0"; sha256="1i2qa0rd0ncx77cr1d3f4wb939na5ycpli3q3d8k2l027nl4rjks"; depends=[]; }; - PathNetData = derive2 { name="PathNetData"; version="1.10.0"; sha256="16k9nvxhs80vfcvjhr3dssxjq53zlm1802dkr24icngpnfmlwnj2"; depends=[]; }; - ProData = derive2 { name="ProData"; version="1.12.0"; sha256="14mrgfxk3jrzy3ghdcrh8flfkm4b6xi42sjb8sws57jfcda0zd2v"; depends=[Biobase]; }; - PtH2O2lipids = derive2 { name="PtH2O2lipids"; version="1.0.0"; sha256="1gsz60vg8h0w13v29bkj3pczivn7cpkg515rl5rj42vjxbw4mnsh"; depends=[CAMERA LOBSTAHS xcms]; }; - QDNAseq_hg19 = derive2 { name="QDNAseq.hg19"; version="1.4.0"; sha256="1l0m384swvnxz4jrcgzc0a4fr03g12by1b5y9ncwdkwrz8imr52q"; depends=[QDNAseq]; }; - QDNAseq_mm10 = derive2 { name="QDNAseq.mm10"; version="1.4.0"; sha256="1sp8jsjy0gji38sx44qdrp9v0s0inw0r7hrgwbjvr6vn6xmifg6i"; depends=[QDNAseq]; }; - QUBICdata = derive2 { name="QUBICdata"; version="1.2.0"; sha256="148rgjgj1fkvc4nw7mszhc2dagljhx672vpyvldjr4cnkwwd9vwz"; depends=[]; }; - RIPSeekerData = derive2 { name="RIPSeekerData"; version="1.10.0"; sha256="0bfpr197gjhwszpmvdfkmfa92yrc9jp567h5whzl0mb687k6ax3n"; depends=[RIPSeeker]; }; - RMassBankData = derive2 { name="RMassBankData"; version="1.12.0"; sha256="1fzylbwhqn5al98c1jmdj7bzn7np233h617hbzcxblknaglafv0m"; depends=[]; }; - RNAinteractMAPK = derive2 { name="RNAinteractMAPK"; version="1.12.0"; sha256="0dv23vr84xr3rjk0syx9d1x9zj2d42rl3yfsbh2aaf1rcrjafc14"; depends=[fields gdata genefilter MASS RNAinteract sparseLDA]; }; - RNAseqData_HNRNPC_bam_chr14 = derive2 { name="RNAseqData.HNRNPC.bam.chr14"; version="0.12.0"; sha256="13pb2ljr4mq741vc443r573ynbynjsrhmas5gf2qnyn4j4wj5bra"; depends=[]; }; - RRBSdata = derive2 { name="RRBSdata"; version="0.108.0"; sha256="0sjw006kzikck8kdfvpqyx8bkhmfcbz363imgm72avzdqn7z5430"; depends=[BiSeq]; }; - RTCGA_CNV = derive2 { name="RTCGA.CNV"; version="1.2.0"; sha256="0gf5l0mzihhl4rhfqd81g4ql8pvwm2lgj9qjybfp94pr3h9kkfvx"; depends=[RTCGA]; }; - RTCGA_PANCAN12 = derive2 { name="RTCGA.PANCAN12"; version="1.2.0"; sha256="0kkg0ds8p5rrjcdzq81g1bplxl685k5iki9w11kwpkmnnxslf5f8"; depends=[RTCGA]; }; - RTCGA_RPPA = derive2 { name="RTCGA.RPPA"; version="1.2.0"; sha256="0088cm640mzbzbyj1pmvi35l0s2zpl5x2pmhj2lz2zjp4dis2g3p"; depends=[RTCGA]; }; - RTCGA_clinical = derive2 { name="RTCGA.clinical"; version="20151101.4.0"; sha256="0qhg1dx77xarjzb41dpvhlvl9aqwsyscavk3n3w33zpn1r087v33"; depends=[RTCGA]; }; - RTCGA_mRNA = derive2 { name="RTCGA.mRNA"; version="1.2.0"; sha256="1grrcrd8lsjfk056r018y2rkn2zr31k4jc854mllh7sgpg0jr6br"; depends=[RTCGA]; }; - RTCGA_methylation = derive2 { name="RTCGA.methylation"; version="1.2.0"; sha256="1c7j35jn0076v3pv0h2yiphl2b9ga8hq0d6xb6hm7jasgq4i4w25"; depends=[RTCGA]; }; - RTCGA_miRNASeq = derive2 { name="RTCGA.miRNASeq"; version="1.2.0"; sha256="1mfbq20s2zp234arkqy0g5km7y8jnymwnm4vl13vxqqcv12f3kr8"; depends=[RTCGA]; }; - RTCGA_mutations = derive2 { name="RTCGA.mutations"; version="20151101.4.0"; sha256="0jxr2g8x5z4vyhs9n3ciiis45bs3jg3vg1v4mwxl4v4gys8p3i9b"; depends=[RTCGA]; }; - RTCGA_rnaseq = derive2 { name="RTCGA.rnaseq"; version="20151101.4.0"; sha256="0ag3kmh2zfg9rqpmiih686klpcqd05l2cf5zfvg0vjwcim30xph2"; depends=[RTCGA]; }; - RUVnormalizeData = derive2 { name="RUVnormalizeData"; version="0.108.0"; sha256="134ixgi809nmp54p7h94878pl61w3djrizvb32cb228a6djc1aj4"; depends=[Biobase]; }; - RforProteomics = derive2 { name="RforProteomics"; version="1.12.0"; sha256="1hzgq16mhrd0n7myav91ykmbvi3r71g625x52lvi61shjism5jp7"; depends=[Biobase BiocInstaller biocViews interactiveDisplay MSnbase R_utils rpx shiny]; }; - RnBeads_hg19 = derive2 { name="RnBeads.hg19"; version="1.6.0"; sha256="1dssr1d9md7xl7fm1b537wxsa1bqqwjvb8mnrmqwl3ish0asy525"; depends=[GenomicRanges]; }; - RnBeads_hg38 = derive2 { name="RnBeads.hg38"; version="1.6.0"; sha256="172rbvi4gqsygb7fhdymzm0a2r4wyikgzfaxgjj4bwkl24lss6ac"; depends=[GenomicRanges]; }; - RnBeads_mm10 = derive2 { name="RnBeads.mm10"; version="1.6.0"; sha256="100dzzmmvmb5s43hckn286waja0qkd5rhba0cas3ifg5n21inbyc"; depends=[GenomicRanges]; }; - RnBeads_mm9 = derive2 { name="RnBeads.mm9"; version="1.6.0"; sha256="1jdr4vz4dp4q1ifjz38s5i6lwdvaws29176679m0xsckmvw8rlf8"; depends=[GenomicRanges]; }; - RnBeads_rn5 = derive2 { name="RnBeads.rn5"; version="1.6.0"; sha256="0bfcs51lmrm5ydd5zbkpkaw69ziq3yg00hi0kkcjrhk7nn1kjp66"; depends=[GenomicRanges]; }; - RnaSeqSampleSizeData = derive2 { name="RnaSeqSampleSizeData"; version="1.6.0"; sha256="01vwk652hhh6rc6l0q0ylnzh0ng5ck91kki37qib7c714fy6f1fa"; depends=[edgeR]; }; - RnaSeqTutorial = derive2 { name="RnaSeqTutorial"; version="0.12.0"; sha256="07jkzxavpyg54ddh4xmzxsilcrr8x8w7lj6c4s02s8j23rxzxi2h"; depends=[easyRNASeq]; }; - SCLCBam = derive2 { name="SCLCBam"; version="1.6.0"; sha256="1lhc5c6icys4qnsbc2ixck3h63fsa8pnypam5k6wbvw79afr4xnm"; depends=[]; }; - SNAData = derive2 { name="SNAData"; version="1.20.0"; sha256="1ny0fdgx2kv6hs0rqnc70aixsa2cs7i2r17dklv529iks49i3n2n"; depends=[graph]; }; - SNAGEEdata = derive2 { name="SNAGEEdata"; version="1.10.0"; sha256="182agiw245zrb7lbyn1c38w1kljqs73lkvhvrlrilww1bfhwlrwc"; depends=[]; }; - SNPhoodData = derive2 { name="SNPhoodData"; version="1.4.0"; sha256="1w36157kdn1fji5pgj75bf88isfhvavpgyxnm9dfnzz5r1qaxx79"; depends=[]; }; - SVM2CRMdata = derive2 { name="SVM2CRMdata"; version="1.6.0"; sha256="1rsagb2nlc8airrdql7sa4rl1h34nhmds4lz0yx5i3dca8jzqn61"; depends=[]; }; - Single_mTEC_Transcriptomes = derive2 { name="Single.mTEC.Transcriptomes"; version="1.2.1"; sha256="143qp77bhrrclfvqqsk86cz7xqsnn5wfi41z9hp4klai0dhgk68g"; depends=[]; }; - SomatiCAData = derive2 { name="SomatiCAData"; version="1.12.0"; sha256="1cqbprdlrz3yz1zjjrd33wy4ybhkfq943pv3pi0bx4yz9gqc5625"; depends=[]; }; - SomaticCancerAlterations = derive2 { name="SomaticCancerAlterations"; version="1.10.0"; sha256="0sqdgmqs3ds3hnfn7nmmzhs8m5if8wy8rrfp7q76qhz7winqmqxh"; depends=[exomeCopy GenomicRanges IRanges S4Vectors stringr]; }; - SpikeIn = derive2 { name="SpikeIn"; version="1.16.0"; sha256="0nvxix2hsamcffdg6zqlvavx6l41qmfz7q1ycq99rjmv4rznl1z1"; depends=[affy]; }; - SpikeInSubset = derive2 { name="SpikeInSubset"; version="1.14.0"; sha256="16yisl8m9ggb995snsbhsfxxnqr2v2d5k8ay9w2hipkacaiskwcm"; depends=[affy Biobase]; }; - TBX20BamSubset = derive2 { name="TBX20BamSubset"; version="1.10.0"; sha256="1008i15x17k20596da1ai2dxqhyqi9v6bpskd0c66xvhnifmzpna"; depends=[Rsamtools xtable]; }; - TCGAMethylation450k = derive2 { name="TCGAMethylation450k"; version="1.10.0"; sha256="089ddz2w5kqn3zc07ji9lb7k6msd7r4a6j6aymkx59d10qlx97f6"; depends=[]; }; - TCGAcrcmRNA = derive2 { name="TCGAcrcmRNA"; version="0.108.0"; sha256="0zkawybz6fyfcsga92vw6mx1y1qb6nrp9qcmjvd8ki9phhg7k8yb"; depends=[Biobase]; }; - TCGAcrcmiRNA = derive2 { name="TCGAcrcmiRNA"; version="0.108.0"; sha256="13ipkl1rd2s0vdz32jp30hz3fz7d9hmhfx626jy9q576iqpqb94j"; depends=[Biobase]; }; - TargetScoreData = derive2 { name="TargetScoreData"; version="1.10.0"; sha256="1jw9nhylj82g5gmhl1a6pirf4jyb1i79mm9a3afqrcgv55a5ksvp"; depends=[]; }; - TargetSearchData = derive2 { name="TargetSearchData"; version="1.12.0"; sha256="0acijg56wx91xqrmgqp1pk8cwl3wf5j4f8csdd9p46frlfa5iw8c"; depends=[TargetSearch]; }; - TimerQuant = derive2 { name="TimerQuant"; version="1.4.0"; sha256="1pihpj8q0vrhwip6c35lnv78r3nqcs1p18npb26bxhv02hb8cc6i"; depends=[deSolve dplyr ggplot2 gridExtra locfit shiny]; }; - WES_1KG_WUGSC = derive2 { name="WES.1KG.WUGSC"; version="1.6.0"; sha256="0lpmrqmgcv96rbfylgsaffwwp5qqnj7kmfniahhj4zsxyjsy90fg"; depends=[]; }; - XhybCasneuf = derive2 { name="XhybCasneuf"; version="1.12.0"; sha256="00pdinf4mnl5mbwlzh7vwqw775ag2v2g5b5lqnhmxsnyfqsxgpb5"; depends=[affy ath1121501cdf RColorBrewer tinesath1cdf]; }; - affycompData = derive2 { name="affycompData"; version="1.12.0"; sha256="1yz3y8y169qla8x194zlc3im43827a7233gla6arv552yg3fj703"; depends=[affycomp Biobase]; }; - affydata = derive2 { name="affydata"; version="1.22.0"; sha256="1zizi0p3r3y9h6kk2a1hci9x23i2wbq1krvl9nxd6jzx09fq25sv"; depends=[affy]; }; - airway = derive2 { name="airway"; version="0.108.0"; sha256="00vxi6i9c5c14gfqm5w9q6lg0h1hb96rfm8jqsvw81lpqqlnyjgd"; depends=[SummarizedExperiment]; }; - alpineData = derive2 { name="alpineData"; version="1.0.0"; sha256="0s3xls7b71xn6f9fsqim79cnv4mf5xz1dli9rr4ralzllvh9hm9d"; depends=[AnnotationHub ExperimentHub ExperimentHubData]; }; - antiProfilesData = derive2 { name="antiProfilesData"; version="1.10.0"; sha256="1fzjic8prjwpx43imm73g0znzry42rlziyzr5n6zkbgqx44kh398"; depends=[Biobase]; }; - aracne_networks = derive2 { name="aracne.networks"; version="1.0.0"; sha256="1y2n3xdaccfmij7jaxgzjh1bwvaczp8wsd6757fm8mn1qgalgjdc"; depends=[viper]; }; - bcellViper = derive2 { name="bcellViper"; version="1.10.0"; sha256="1pc4av4i0iwxg0v5aqb9rn0m2z8vnqqwxs57x3nsdirhl7pv92qm"; depends=[Biobase]; }; - beadarrayExampleData = derive2 { name="beadarrayExampleData"; version="1.12.0"; sha256="1kknkispmbxhwikhl0b3g2p0885gm82h3bdl6id4rwxvli86db8s"; depends=[beadarray Biobase]; }; - beta7 = derive2 { name="beta7"; version="1.12.0"; sha256="0lm2lz36lmz6kxp1ia7cfd129kif9a2vyn2cngjsvhvm2pxplrl5"; depends=[marray]; }; - bladderbatch = derive2 { name="bladderbatch"; version="1.12.0"; sha256="0dsz57a9si7i06nwvmvn0l65jhc1xbc3ywjh1z32smm8rvn8x90b"; depends=[Biobase]; }; - blimaTestingData = derive2 { name="blimaTestingData"; version="0.108.0"; sha256="02fksg7kpb9knj7f47l0dbc016min91xf9d5xccpa833wylylyjj"; depends=[]; }; - breastCancerMAINZ = derive2 { name="breastCancerMAINZ"; version="1.12.0"; sha256="0smmvhb38z6wa7inbg5y8skl10p7yybq9qh2847xpzdnivldxfwa"; depends=[]; }; - breastCancerNKI = derive2 { name="breastCancerNKI"; version="1.12.0"; sha256="0bznvksrmpxp0ba9md96ch2qsk67jyda33b74bzk0hrxkijhm1i4"; depends=[]; }; - breastCancerTRANSBIG = derive2 { name="breastCancerTRANSBIG"; version="1.12.0"; sha256="0sghqg2fs7khb54x2p3mlc7mynbp417bccszcij9gq43njwfdra0"; depends=[]; }; - breastCancerUNT = derive2 { name="breastCancerUNT"; version="1.12.0"; sha256="0pg862q0m9m51iqk85gx9ihl17ld0x7i7j39g0y7bcvr7cy1djrd"; depends=[]; }; - breastCancerUPP = derive2 { name="breastCancerUPP"; version="1.12.0"; sha256="0pidz7safi6z2nbrz2wrjqx1ygyxg6ggagv4sfdy53ym07lwfdz3"; depends=[]; }; - breastCancerVDX = derive2 { name="breastCancerVDX"; version="1.12.0"; sha256="197g42apvsp9vaipj4zf3kma90j8zsvx9b8q4crdl5czvkzmpixa"; depends=[]; }; - bronchialIL13 = derive2 { name="bronchialIL13"; version="1.12.0"; sha256="0amg5fn0dprnz5wwjacm73xbih1bbw04f0vm3rfplpiwqh83cq1g"; depends=[affy]; }; - bsseqData = derive2 { name="bsseqData"; version="0.12.0"; sha256="0m0dj3rd7m80la8h58s1lfxfkmz3a242vp3i1yiv9y6c0hca7yq4"; depends=[bsseq]; }; - cMap2data = derive2 { name="cMap2data"; version="1.10.0"; sha256="0l7hnr6w5g0n0ma24xm57dlqdrrlrhm6a4cw4p65hwn9djxxiz1m"; depends=[]; }; - cancerdata = derive2 { name="cancerdata"; version="1.12.0"; sha256="0rzp8a210vk8j9nlf1g228jsccdbabl99jbd27qi90bbs0kdnkp3"; depends=[Biobase]; }; - ccTutorial = derive2 { name="ccTutorial"; version="1.12.0"; sha256="17r030iajkaash8jfzfdb7d2xfd5mn9q27mkc11dycpqbji61q1q"; depends=[affy Biobase Ringo topGO]; }; - ccdata = derive2 { name="ccdata"; version="1.0.0"; sha256="05raawlm17vhiap34z812g1ri5yc77h7qs4lj1gfk1kkcpj2knsf"; depends=[]; }; - ceu1kg = derive2 { name="ceu1kg"; version="0.12.0"; sha256="09xi5fvr7cigs1qs98phcapzqi8jam34gky2pxksi9gkw2n9j451"; depends=[Biobase GGBase GGtools]; }; - ceu1kgv = derive2 { name="ceu1kgv"; version="0.16.0"; sha256="11hyhddf395hyypxsl8na23pwcwlnmr639c927wxqibxxp1lfqsk"; depends=[Biobase GGBase]; }; - ceuhm3 = derive2 { name="ceuhm3"; version="0.12.0"; sha256="03qkfk9mxz510lmr9spv74d3138bvfcpsgp0qnjw3jj2xiwn4jqq"; depends=[Biobase GGBase GGtools]; }; - cgdv17 = derive2 { name="cgdv17"; version="0.12.0"; sha256="1cl725dhyh81rsxgv2icfljczbcgsnqba383gjfyf06d2qarby1y"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors VariantAnnotation]; }; - charmData = derive2 { name="charmData"; version="1.10.0"; sha256="1v760z5br1cj5dj97ayl68dv202086v2mcnhn6bpv0kf62q9mia2"; depends=[charm pd_charm_hg18_example]; }; - cheung2010 = derive2 { name="cheung2010"; version="0.12.0"; sha256="15z6p2kfrbs9wbsf7rqmg53k5i6gja5hix97sl9bj7y3jkxws62b"; depends=[AnnotationDbi Biobase GenomicRanges GGtools hgfocus_db]; }; - chipenrich_data = derive2 { name="chipenrich.data"; version="1.10.0"; sha256="0zcj4pa03ny4b1rng4ima23jc6sqvsznp52d59vipnqd4jg1ic95"; depends=[BiocGenerics GenomicRanges IRanges]; }; - chromstaRData = derive2 { name="chromstaRData"; version="1.0.0"; sha256="0d0g20mg36mxldl9f0bzqbz9vzp526pqy501k0g7bmj5sbgd2p3s"; depends=[]; }; - cnvGSAdata = derive2 { name="cnvGSAdata"; version="1.10.0"; sha256="04bkk8360pc0sp8n1z16smj888gbglgghklciwpzk2d513wwapdr"; depends=[cnvGSA]; }; - colonCA = derive2 { name="colonCA"; version="1.16.0"; sha256="1kjlw5qi6yvk6amvnmjjnr5ypvqmslmm9lmkgdgab3s38hyddj2a"; depends=[Biobase]; }; - curatedBladderData = derive2 { name="curatedBladderData"; version="1.10.0"; sha256="1k957gad0xlv0nzcimypf32dpqvldc1w8lj2a274y8spb66imfnw"; depends=[affy]; }; - curatedBreastData = derive2 { name="curatedBreastData"; version="2.0.1"; sha256="1l767mg3bknp91is7mqb13w2kpdihf4vbphwhqyvmzsl5rv2vc7y"; depends=[Biobase BiocStyle ggplot2 impute XML]; }; - curatedCRCData = derive2 { name="curatedCRCData"; version="2.6.0"; sha256="1l1lzkyrvpz334xda4z3mxh2ql3zhhmc376znrjfryzi5jbypnh4"; depends=[BiocGenerics nlme]; }; - curatedMetagenomicData = derive2 { name="curatedMetagenomicData"; version="1.0.4"; sha256="0xpq25rmg8bxwsvm35qm20l6b7a3kg5p9ngvj2dvnf00jn7vv2bj"; depends=[AnnotationHub Biobase BiocInstaller dplyr ExperimentHub magrittr phyloseq tidyr]; }; - curatedOvarianData = derive2 { name="curatedOvarianData"; version="1.12.0"; sha256="1qjmmxh0cb4y418rl5wg8inkj5cffniw7jd6vjj3j2yiaq9b5d6l"; depends=[affy BiocGenerics]; }; - davidTiling = derive2 { name="davidTiling"; version="1.14.0"; sha256="0n7invq1j0lmrylzrggmlndj4ag196rhyn0lvi746p8sxzdapfaf"; depends=[Biobase GO_db tilingArray]; }; - derfinderData = derive2 { name="derfinderData"; version="0.108.0"; sha256="041yq05x9d09n82c9wnwqa1rakkf4p1q3rs9vlacl45bdqdbdsa4"; depends=[]; }; - diffloopdata = derive2 { name="diffloopdata"; version="1.2.0"; sha256="0vvkgfixvs76cymz0nlyzp7sh9jzd1mcbl5pbnnziybwn5fdpw3g"; depends=[]; }; - diggitdata = derive2 { name="diggitdata"; version="1.6.0"; sha256="0xyvd8jdpn3y9s88z489cinacb4bnnp1jqg2aj7h9hhaj95pywsq"; depends=[Biobase viper]; }; - dressCheck = derive2 { name="dressCheck"; version="0.12.0"; sha256="1mm8hlivhcf9f01aqdcipq4wz7x3ga8znpcpi69jgh3iadf5x2xq"; depends=[Biobase]; }; - dsQTL = derive2 { name="dsQTL"; version="0.12.0"; sha256="00nry3qf9r79x65scyfghjyj2qbc6ji0l7c1rayrk5s6pxj0v0hw"; depends=[Biobase GGBase SummarizedExperiment]; }; - dyebiasexamples = derive2 { name="dyebiasexamples"; version="1.14.0"; sha256="18ghl3l7ps6xz90gyrnz3zc0rba99yg8ry9fpfbv7yni888hl9bx"; depends=[GEOquery marray]; }; - ecoliLeucine = derive2 { name="ecoliLeucine"; version="1.14.0"; sha256="1s03jpb83j8xgwxdr5z7233175jhd4w7vikalxvh1mvk9bqa8rmk"; depends=[affy ecolicdf]; }; - estrogen = derive2 { name="estrogen"; version="1.20.2"; sha256="19f1gjppzfg21ci6jdxgwv7h14mm89spnj4qr71pwid0a4kiq6gn"; depends=[]; }; - etec16s = derive2 { name="etec16s"; version="1.2.0"; sha256="11c1swf7n9g1vnvidmcjpvzj3hgv4dgx6civv3plvamzfcz3jk29"; depends=[Biobase metagenomeSeq]; }; - faahKO = derive2 { name="faahKO"; version="1.14.0"; sha256="1yxrmnbpi706q23n6jc3hngl378w41dkhzcy4gqlbcgwdhbi9yq5"; depends=[xcms]; }; - fabiaData = derive2 { name="fabiaData"; version="1.12.0"; sha256="1ws09sp07i26ky6pwambw3bvnd2qx2rsvm055hp1j3vrc7qvawwb"; depends=[Biobase]; }; - facopy_annot = derive2 { name="facopy.annot"; version="0.108.0"; sha256="1wxprfj0420qfbls1jd58raa7ff98fhnna804slagrs8r2ka7kqb"; depends=[]; }; - facsDorit = derive2 { name="facsDorit"; version="1.16.0"; sha256="1dla6vv0had55afsv2h8hizkqbng7schadb5w5nbk3va7hzbnjzb"; depends=[prada]; }; - ffpeExampleData = derive2 { name="ffpeExampleData"; version="1.12.0"; sha256="16n6kfcq33byrn0xx43bn52c0rbzw3ars9wxg9yd9rfnf23scmbb"; depends=[lumi]; }; - fibroEset = derive2 { name="fibroEset"; version="1.16.0"; sha256="1sr672f6x52rhic69i8cii04cd204ra0lhpxh0dqm78yxkp5mqxc"; depends=[Biobase]; }; - fission = derive2 { name="fission"; version="0.108.0"; sha256="0fdsaymwv057sb0bddkaqz320wm6bk1hikwy9js4pc5mbi2r9q1w"; depends=[SummarizedExperiment]; }; - flowFitExampleData = derive2 { name="flowFitExampleData"; version="1.10.0"; sha256="1z2q9h4arv8a89a5g5j5pzp1k02kmz1h6g0zrvgvz04ys411phv3"; depends=[flowCore]; }; - flowPloidyData = derive2 { name="flowPloidyData"; version="1.0.0"; sha256="16sgzy2xpjnlm22ca3fvdcfzlfyylsxpjzbv8xaz3lmb7gf8fqix"; depends=[]; }; - flowQBData = derive2 { name="flowQBData"; version="1.0.0"; sha256="1lyj5xkc70l3szxspa6gasnx5g4sv6azwzs0b1cvs5y5kngxpns3"; depends=[]; }; - flowWorkspaceData = derive2 { name="flowWorkspaceData"; version="2.10.0"; sha256="1pfy1f0flkf22a7ijb2xay6za80y9ny5ja2dy6p4z9w8cqyk8vqp"; depends=[]; }; - frmaExampleData = derive2 { name="frmaExampleData"; version="1.10.0"; sha256="1iznkg12c50lzj0xj1fz92ybqap09fysx0f71g84qpmdh7df5aap"; depends=[]; }; - furrowSeg = derive2 { name="furrowSeg"; version="1.2.0"; sha256="0h596g0j6by70ijpli9m2wnxnj7g6gz92vv2dl68s7jnya4n88s9"; depends=[abind dplyr EBImage locfit tiff]; }; - gageData = derive2 { name="gageData"; version="2.12.0"; sha256="1fn4by56fqa9dfyb5a7pjv5f6nsp8gybgp572dyl3jq7bp9imr3j"; depends=[]; }; - gaschYHS = derive2 { name="gaschYHS"; version="1.12.0"; sha256="1cwnik2znx13i4p8g3wxyk19r9pd3flxha04b0y4404pvwxa7gac"; depends=[Biobase]; }; - gatingMLData = derive2 { name="gatingMLData"; version="2.14.0"; sha256="0yshv46pj4fjyz49azbrzdqjzppkx4548fsb2k77dvypim6hiiwm"; depends=[]; }; - gcspikelite = derive2 { name="gcspikelite"; version="1.12.0"; sha256="0a5gmf667wr1vx2qalz4fvk0c49m6590mvv96ijnrdd9p6k1g450"; depends=[]; }; - geneLenDataBase = derive2 { name="geneLenDataBase"; version="1.10.0"; sha256="1a4qqpcid9g1zx5zrpcshlwm8xk1bbppanyfpx077sa0ifpjcxny"; depends=[GenomicFeatures rtracklayer]; }; - genomationData = derive2 { name="genomationData"; version="1.6.0"; sha256="16dqwb7wx1igx77zdbcskx5m1hs4g4gp2hl56zzm70hcagnlkz8y"; depends=[]; }; - geuvPack = derive2 { name="geuvPack"; version="1.6.0"; sha256="17yr9zm3kk7744sdiyyls4g1n6fhwfq1gafj1713viygk46ff0ps"; depends=[SummarizedExperiment]; }; - geuvStore2 = derive2 { name="geuvStore2"; version="1.4.0"; sha256="1vrb5a62p6wm9vsf7q9hwjr0n5yv5cqr3z50jd6ymwxb9jy3f4vg"; depends=[BatchJobs GenomicRanges gQTLBase]; }; - golubEsets = derive2 { name="golubEsets"; version="1.16.0"; sha256="13lhfhagnc17yva53ax0847mzrlp65bsn8b9haq678kjmd0ry25k"; depends=[Biobase]; }; - grndata = derive2 { name="grndata"; version="1.6.0"; sha256="0hqli6f9x7amhlwgszhhvrhbazb3ga0r31107n5v5nxfwqmbmgwg"; depends=[]; }; - gskb = derive2 { name="gskb"; version="1.6.1"; sha256="1az4dw0hwh2ba1v9k5zajgcicxihmr668cvw5qqka14mvh1im30h"; depends=[]; }; - h5vcData = derive2 { name="h5vcData"; version="1.108.0"; sha256="13rh4bk47q2nkfgj6sbwbifcidmf34i7s4dhymr8gabplxfcy9mj"; depends=[]; }; - hapmap100khind = derive2 { name="hapmap100khind"; version="1.16.0"; sha256="1aaiszx3dhphx62g246w9qngadqj9azkyk7k49igsng329mz8836"; depends=[]; }; - hapmap100kxba = derive2 { name="hapmap100kxba"; version="1.16.0"; sha256="1awqvkxcnb3zmi5cds6krs4hc4q90q7kn592ir9a3ypsqsbva4dz"; depends=[]; }; - hapmap500knsp = derive2 { name="hapmap500knsp"; version="1.16.0"; sha256="0cgwy7fqmhg947vfhl4cymj5ssb7avdj330cj7cjil2zilcg3a52"; depends=[]; }; - hapmap500ksty = derive2 { name="hapmap500ksty"; version="1.16.0"; sha256="11y06piiwgh1v6c489fkjxf8yw9zfc0llrhhnx2syhscfdgw94md"; depends=[]; }; - hapmapsnp5 = derive2 { name="hapmapsnp5"; version="1.16.0"; sha256="1a0x1prw77d1lddlbdnvqank98xx8gd7a1a8n6c6fwkjynxn32ha"; depends=[]; }; - hapmapsnp6 = derive2 { name="hapmapsnp6"; version="1.16.0"; sha256="0rppn6x3f2fpr369mv04pg6pvbmp0j4lnyj84l0vvmqrjyij3vqz"; depends=[]; }; - harbChIP = derive2 { name="harbChIP"; version="1.12.0"; sha256="01spjp27icgfjwf3cjvz8w5kg6gpqmlkfxdm3j2irn9qvpphw186"; depends=[Biobase Biostrings IRanges]; }; - healthyFlowData = derive2 { name="healthyFlowData"; version="1.12.0"; sha256="1dfcc1v22wbzbbsrkjvy8mhv6brxisz5yv1g7zrpswnmchbqxkvd"; depends=[flowCore]; }; - hgu133abarcodevecs = derive2 { name="hgu133abarcodevecs"; version="1.12.0"; sha256="1ig7myihlmcd39g6qqmbb8fm59vpizfxps4x8pbj676p1578iaw9"; depends=[]; }; - hgu133plus2barcodevecs = derive2 { name="hgu133plus2barcodevecs"; version="1.12.0"; sha256="0bnl9z34xn4frqlc9pvnvp4ng1ky0vn5zvjwjv6hc6dki14cgfxp"; depends=[]; }; - hgu2beta7 = derive2 { name="hgu2beta7"; version="1.14.0"; sha256="115zgss29249az653hw2cd02skmr9fbivsh6zj837m4scnbjwpqz"; depends=[]; }; - hmyriB36 = derive2 { name="hmyriB36"; version="1.10.0"; sha256="1whpk1479qhlxmd44bhpsm1xlz2z4pxn918kpwis9mn1inwbmwp0"; depends=[Biobase GGBase]; }; - humanStemCell = derive2 { name="humanStemCell"; version="0.14.0"; sha256="16ad8syrainj8zpp9mhqfxq8xsn9jfdiyf29zjhdb4pnci3rqf7i"; depends=[Biobase hgu133plus2_db]; }; - iontreeData = derive2 { name="iontreeData"; version="1.10.0"; sha256="187d9mdamp3kb1nvp0ckhza6ws4ga9c4fw35isnc1jsssag1pf7j"; depends=[]; }; - kidpack = derive2 { name="kidpack"; version="1.16.0"; sha256="10cab09hdyrndnjgazbvlm3c89qmmj458nbvdd8liiipq1r6f3qv"; depends=[Biobase]; }; - leeBamViews = derive2 { name="leeBamViews"; version="1.10.0"; sha256="0s9brwvhmmylbs7fjkg4g72kd6kdycy0qmk5hgldz3n266pna293"; depends=[Biobase BSgenome GenomicAlignments GenomicRanges Rsamtools]; }; - leukemiasEset = derive2 { name="leukemiasEset"; version="1.10.0"; sha256="1n3np631cbdvd809af4s9ngrz2lrvclb313dwz6zhjsp0y0gs6n9"; depends=[Biobase]; }; - lumiBarnes = derive2 { name="lumiBarnes"; version="1.14.0"; sha256="1bagqlq1j6z578zal05xxvvqnfi33rrlgbdq7sj484wyr6jbgxim"; depends=[Biobase lumi]; }; - lungExpression = derive2 { name="lungExpression"; version="0.12.0"; sha256="1lqc2rcsyqzn9799ak61dgrb917f9cfgn7x7ck0d4629sdczm7x7"; depends=[Biobase]; }; - lydata = derive2 { name="lydata"; version="1.0.0"; sha256="1c1g17q3ffc4k82ppb1vzi3567wza2q8p06ahd9xnni5hmb5v8jv"; depends=[]; }; - mAPKLData = derive2 { name="mAPKLData"; version="1.6.0"; sha256="02vx2v0sdzgwzpcgcnszs8q4jdimsis6lyfq6f4pm4b7fccy1as3"; depends=[]; }; - mammaPrintData = derive2 { name="mammaPrintData"; version="1.10.0"; sha256="1pn0i0bhjs2kyrafafhh8kfgvs0x6nnny8p6zpnivyn4y8hjh5lf"; depends=[]; }; - maqcExpression4plex = derive2 { name="maqcExpression4plex"; version="1.18.0"; sha256="1ijr4856mdfapcpbmndxhllsvmhih1cra8zm6k9wz1id29b12s2g"; depends=[]; }; - metaMSdata = derive2 { name="metaMSdata"; version="1.10.0"; sha256="1f2f7798j1pc74414mvx48w6bbxbsk2rm7l1298sfl1av914yl7a"; depends=[]; }; - miRNATarget = derive2 { name="miRNATarget"; version="1.12.0"; sha256="0k5vgccwfnybbwngbzyz1j98h9jwidv3ypfymz01yjr6cahn5fgv"; depends=[Biobase]; }; - miRcompData = derive2 { name="miRcompData"; version="1.4.0"; sha256="1gabbbvnmw38snv2zn3i3763n4r38zr9rv854snmy9fhykry0rlq"; depends=[]; }; - minfiData = derive2 { name="minfiData"; version="0.20.0"; sha256="1gg2dg3s92vqnigdg56j91zifv2kl9asiqrrbjmac0pyd0vi555c"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; }; - minfiDataEPIC = derive2 { name="minfiDataEPIC"; version="1.0.0"; sha256="1dmjdfnwia8ka2lya1fin4kj6anjn9szhphnypzhaxxzmli11x2a"; depends=[IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest minfi]; }; - minionSummaryData = derive2 { name="minionSummaryData"; version="1.4.0"; sha256="19xlsnfcr9fh7f3nmd0aj6sd03c0bd6ibfbx4rkxsmgfsdfvidzh"; depends=[]; }; - mitoODEdata = derive2 { name="mitoODEdata"; version="1.10.0"; sha256="1br92nqvfhc67dsz2b10mzp19rk8bbfb9zaawk6n4pyfn4pdcn4w"; depends=[]; }; - mosaicsExample = derive2 { name="mosaicsExample"; version="1.12.0"; sha256="0fgb8ifaygs31ck0xybwr5p85zvkw236lilzcsn9hnsdp2zckkff"; depends=[]; }; - mouse4302barcodevecs = derive2 { name="mouse4302barcodevecs"; version="1.12.0"; sha256="0g2g5kpgpv436k09n43jilzb539faqvp9k41h3xfgw8kqsln10fp"; depends=[]; }; - msPurityData = derive2 { name="msPurityData"; version="1.0.0"; sha256="08kz9ihbjxfi64sds5s04ay9g8y1y6fjyaxvd2mvqvzwd3hykzqh"; depends=[]; }; - msd16s = derive2 { name="msd16s"; version="0.108.0"; sha256="0gcs6r3z40lc8rsnlnkf01qbnws7bcvi19gx6r2jrlbma14sb22f"; depends=[Biobase metagenomeSeq]; }; - msdata = derive2 { name="msdata"; version="0.14.0"; sha256="0330ahsx2a5rbqp8kswrq5r85kj5mvv9j5w0bx648isya6j5fzsq"; depends=[]; }; - msqc1 = derive2 { name="msqc1"; version="1.2.0"; sha256="03f3jlpl2q9kkb1q2bzxda5yddgpwhhnbb5y209j101yf2z1qv4b"; depends=[lattice]; }; - mtbls2 = derive2 { name="mtbls2"; version="1.4.0"; sha256="02dzwsjagrwgnrsp16h72x3sgl5gms8xnv0vjbfm9m6ynjcfr2y2"; depends=[]; }; - mvoutData = derive2 { name="mvoutData"; version="1.10.0"; sha256="1hmsk9zlxrqf5znf0rlj1rmsdzdwvr8xnxz6q85ggrr1l9n76g3c"; depends=[affy Biobase lumi]; }; - pRolocdata = derive2 { name="pRolocdata"; version="1.12.0"; sha256="09wisspjxaim23w0lhbk5sczghfjsn00f7qc6zp8d7rvp511c56k"; depends=[Biobase MSnbase]; }; - parathyroidSE = derive2 { name="parathyroidSE"; version="1.12.0"; sha256="1ibf9wia8vn0vmg46rln7lkpd1mm5ahc3cb2kxkzinmsvmqbi2nn"; depends=[SummarizedExperiment]; }; - pasilla = derive2 { name="pasilla"; version="1.2.0"; sha256="0qhmrx4gxprjyd79y3jrx3s8ya6f64jq69lf8ykwgr21h7nsacbl"; depends=[]; }; - pasillaBamSubset = derive2 { name="pasillaBamSubset"; version="0.12.0"; sha256="0ib1n90k231qckd4kv2wjkw7xxc88gc8h651r06rqalgmldfxg8r"; depends=[]; }; - pcaGoPromoter_Hs_hg19 = derive2 { name="pcaGoPromoter.Hs.hg19"; version="1.10.0"; sha256="1n6dbsq6nbalv4iil2qycwzx84710sz16m2qqq44cgjw2pqmp8ki"; depends=[]; }; - pcaGoPromoter_Mm_mm9 = derive2 { name="pcaGoPromoter.Mm.mm9"; version="1.10.0"; sha256="0gr4xc1kah9n9j8q2yq3an780p8l8qgrba06vc8yw28q9s14lcic"; depends=[]; }; - pcaGoPromoter_Rn_rn4 = derive2 { name="pcaGoPromoter.Rn.rn4"; version="1.10.0"; sha256="0xr0qw6z7dm7brp118bdjh53j83pgxgsbfyl2b1s4qdcqp0b0j5i"; depends=[]; }; - pd_atdschip_tiling = derive2 { name="pd.atdschip.tiling"; version="0.12.0"; sha256="0lv60jkg8zqhbz1hnc206zmxpvz961plgj3s2zxl925pzqgw3jdf"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; - pepDat = derive2 { name="pepDat"; version="0.108.0"; sha256="01biimjr6j6z1plgsbq9qxk4bzg6mc5v0f5lzwwid8r0n6aq9nfk"; depends=[GenomicRanges]; }; - plasFIA = derive2 { name="plasFIA"; version="1.0.0"; sha256="1qqs5n1zbp94p9g87rah3ikdl7gir0m76nyd7ccd232dxkzyl25r"; depends=[proFIA]; }; - ppiData = derive2 { name="ppiData"; version="0.12.0"; sha256="05cg5hiv314a88wfwnd9milfcin0xmsvvn1zzxqhrj8k7j0smxq9"; depends=[AnnotationDbi graph]; }; - prebsdata = derive2 { name="prebsdata"; version="1.10.0"; sha256="01z22jg4l2l55nrb547xih5ra3rcla4k66j1f210rrsl4r5j89wn"; depends=[]; }; - prostateCancerCamcap = derive2 { name="prostateCancerCamcap"; version="1.2.0"; sha256="0xg4xwj0m892lsix27bmi23dssl6fx3y93g14mwnlpq430135j96"; depends=[Biobase]; }; - prostateCancerGrasso = derive2 { name="prostateCancerGrasso"; version="1.2.0"; sha256="189iyjfaylck58w0pg3xnrpg6yld304dgprpsvfjhmrc306v1q79"; depends=[Biobase]; }; - prostateCancerStockholm = derive2 { name="prostateCancerStockholm"; version="1.2.0"; sha256="0h9909wl798nalf1x8qc4p0yx6851r4pda24y7vyxvy2jrrah3kq"; depends=[Biobase]; }; - prostateCancerTaylor = derive2 { name="prostateCancerTaylor"; version="1.2.0"; sha256="1ncri2z1sz4kb0a080y4xhf7ah3szp890h6b3xvmc5c6i8h2pysz"; depends=[Biobase]; }; - prostateCancerVarambally = derive2 { name="prostateCancerVarambally"; version="1.2.0"; sha256="1kffm7b9rhb6jqsz354almakc2dc5zxczhzg9l2wj59knw6527js"; depends=[Biobase]; }; - pumadata = derive2 { name="pumadata"; version="2.10.0"; sha256="03xx41j8w6lip7rsj0fpnq4jrlmhki63wqnmfh9816gc8g7a5yrh"; depends=[affy Biobase oligo puma]; }; - rRDPData = derive2 { name="rRDPData"; version="0.108.0"; sha256="05a42rayxnyzajzabvgzrbj56x7sax96g090r529fd4055582s52"; depends=[rRDP]; }; - rcellminerData = derive2 { name="rcellminerData"; version="1.6.0"; sha256="1c95166shc6yflpgl0wfq26mmr5qypiwhidf0vfkgpp0zk30hfd2"; depends=[Biobase]; }; - rheumaticConditionWOLLBOLD = derive2 { name="rheumaticConditionWOLLBOLD"; version="1.12.0"; sha256="1gc5vpxjgnjpar757x7i5sk7kqy5jhvd11kad1liwfnz694zgkn8"; depends=[]; }; - scRNAseq = derive2 { name="scRNAseq"; version="1.0.0"; sha256="0zh3bashqamivddjahaisl92d8ipzahki10wq8sz6myrb57iavlx"; depends=[SummarizedExperiment]; }; - seq2pathway_data = derive2 { name="seq2pathway.data"; version="1.6.0"; sha256="057rs9s9lf6z3z3k1671r0fzk24jl8pmn1zn0a8x2n66d3bpqv4d"; depends=[]; }; - seqCNA_annot = derive2 { name="seqCNA.annot"; version="1.10.0"; sha256="1g350lys9gdrfkwsmb460y9pbjkzcgxwn22xfsl430mblh09ryhm"; depends=[]; }; - seqc = derive2 { name="seqc"; version="1.8.0"; sha256="0fik3w4qs9a01x54im5ckjwywvr1w0jvcmb0x2ym0xba4q4ypvlv"; depends=[]; }; - serumStimulation = derive2 { name="serumStimulation"; version="1.10.0"; sha256="1nl0qi64kihvvp7kkc7y7zl3m938n7mrkw4vrmdshc00j3ydl1k0"; depends=[]; }; - seventyGeneData = derive2 { name="seventyGeneData"; version="1.10.0"; sha256="1c7zkhv1ijxxy3qiq6rwniay10kqybfqzqysfb94wasp688dixwp"; depends=[]; }; - shinyMethylData = derive2 { name="shinyMethylData"; version="0.108.0"; sha256="13b3c66ijax8d3cw26wjmx2cjnh06z8dx2ahq0xwic3rj2r8ax61"; depends=[]; }; - simpIntLists = derive2 { name="simpIntLists"; version="1.10.0"; sha256="1k8rck49bpp7h2why7fl6bvhv67krzhc4c0ppily3ah2s9vyxm0a"; depends=[]; }; - stemHypoxia = derive2 { name="stemHypoxia"; version="1.10.0"; sha256="1vb3c0k3zrkng95ym4h17y48bcq6xb4izj326w4blajcfyil7kdc"; depends=[]; }; - stjudem = derive2 { name="stjudem"; version="1.14.0"; sha256="09gi8z5ay7hyikqr26npyhim4dzi2hkidnis46ckzfqx9dlar94h"; depends=[]; }; - synapterdata = derive2 { name="synapterdata"; version="1.12.0"; sha256="1ynqzxn8a76788chcfq1vw7mrsm7c39qdjzjr42x4lvabr32gd9p"; depends=[synapter]; }; - systemPipeRdata = derive2 { name="systemPipeRdata"; version="1.4.0"; sha256="1wbf4488b6zmh72m3zpq5la8qybn6gfr89k7r4572i0awgyxccws"; depends=[BiocGenerics]; }; - tinesath1cdf = derive2 { name="tinesath1cdf"; version="1.12.0"; sha256="1gbab6zlzc7f2ywsv198yyf9fr2yq2a7y942mjclfg7ji0zf81kw"; depends=[]; }; - tinesath1probe = derive2 { name="tinesath1probe"; version="1.12.0"; sha256="06r5vxqqglrgpqyf3837kxl6rb5qcxk61b1g1vyi15kb7rzz0qyp"; depends=[AnnotationDbi]; }; - tofsimsData = derive2 { name="tofsimsData"; version="1.2.0"; sha256="1786gqxz4vhvjc0cxc2gi5hz9wnvspb3kmmap1nssjnd44cq8ypa"; depends=[]; }; - tweeDEseqCountData = derive2 { name="tweeDEseqCountData"; version="1.12.0"; sha256="0a6g2lnj5m958yagnkn3fl4x0fw6m4gp9xq0jsv6z7ixs2p73xin"; depends=[Biobase]; }; - tximportData = derive2 { name="tximportData"; version="1.2.0"; sha256="0618jzzacpl7cipcby5v3rd2rb3x9vqiaf9i1arn83h4znwlnykh"; depends=[]; }; - waveTilingData = derive2 { name="waveTilingData"; version="1.10.0"; sha256="1ndqbqisfr2vnfqlmjxvwvkcbs042rqvsqhlpa4pg9l18nfv3zqh"; depends=[]; }; - yeastCC = derive2 { name="yeastCC"; version="1.14.0"; sha256="1sjy4c6jvhpjpr47l0mpa7mms65jj7c1fhv2dxiqxap5pcxl9s40"; depends=[Biobase]; }; - yeastExpData = derive2 { name="yeastExpData"; version="0.20.0"; sha256="17bassc4xn9amlsa33rscgbkk50xwrz3i3vlh9ym1184wq14jmp8"; depends=[graph]; }; - yeastGSData = derive2 { name="yeastGSData"; version="0.12.0"; sha256="0s3458lvcn7xpnwkygl426zqm7h35cl59r0rlp0znnrjvr3f16k3"; depends=[]; }; - yeastNagalakshmi = derive2 { name="yeastNagalakshmi"; version="1.10.0"; sha256="1085snsd7wsi9sjsqm551i2bnv8pf234vvz6xpw9fz0inr6m5wqq"; depends=[]; }; - yeastRNASeq = derive2 { name="yeastRNASeq"; version="0.12.0"; sha256="1rym01mbpn0h70q1c7alhnrqa0c2hb7xmr17qbsh130gqp67c3mq"; depends=[]; }; - yri1kgv = derive2 { name="yri1kgv"; version="0.16.0"; sha256="0xqlqi665ww3w00g5wv089ydjs74iy07xqzbn19bpdqnkypm83rx"; depends=[Biobase GGBase]; }; - yriMulti = derive2 { name="yriMulti"; version="0.4.1"; sha256="1s1riipq4ck655m3cds6ffvzr7hg0aa2fhm8gax2b7hwgqr4xmiz"; depends=[dsQTL GenomicRanges geuvPack gQTLBase Homo_sapiens MultiAssayExperiment SummarizedExperiment]; }; - zebrafishRNASeq = derive2 { name="zebrafishRNASeq"; version="0.108.0"; sha256="04pbkfqb6l8qgxl1263jhhd7gm8hz908c47q5s1f1nvc3403dlbp"; depends=[]; }; + ABAData = derive2 { name="ABAData"; version="1.8.0"; sha256="035h4yrna11d2g3iqnn52sv07ydgpa2my4bwcs4a9di0pf9rbm06"; depends=[]; }; + ALL = derive2 { name="ALL"; version="1.20.0"; sha256="1kz3k99dxam9zqpf1hg4z049f7dliyw3kg9cms1sma2yl5l7nj2y"; depends=[Biobase]; }; + ALLMLL = derive2 { name="ALLMLL"; version="1.18.0"; sha256="051hhfrz4fx28hbi7fycqqbnij9lxh6spj2xqj37nmqc8wx2qfs1"; depends=[affy]; }; + ARRmData = derive2 { name="ARRmData"; version="1.14.0"; sha256="0pxwvghyvd3c717lqixkadh79jrv0r0dl80ds688gxgw2pfcwr6y"; depends=[]; }; + Affyhgu133A2Expr = derive2 { name="Affyhgu133A2Expr"; version="1.14.0"; sha256="1ynwl9rfc0hdacvdmfdm97ya14jqf8q8w93m2vd58nh62p1jmprp"; depends=[]; }; + Affyhgu133Plus2Expr = derive2 { name="Affyhgu133Plus2Expr"; version="1.12.0"; sha256="0bbslhfipz0s5ill8p8wfr47ikx2lg1vi9h71rn0wx1v76q5sgpf"; depends=[]; }; + Affyhgu133aExpr = derive2 { name="Affyhgu133aExpr"; version="1.16.0"; sha256="06q8ixh2zwk4143ppnrdcvgaagzy33swsrlp8l3lqp943fnn2hil"; depends=[]; }; + AffymetrixDataTestFiles = derive2 { name="AffymetrixDataTestFiles"; version="0.16.0"; sha256="1nqdxp33xl2lwcf5lq1v1k2qnid5pf7wxbxldmr0rl6jxlm1r5va"; depends=[]; }; + Affymoe4302Expr = derive2 { name="Affymoe4302Expr"; version="1.16.0"; sha256="1j4czciqiaj2fqf7v5yd41ln31gl6sqs6s07i9pwyclhw66f3y56"; depends=[]; }; + AmpAffyExample = derive2 { name="AmpAffyExample"; version="1.18.0"; sha256="0bc2cdqvqdalq5hqhnnzayh2klnzqaw6micgsk35mai0lak34rpd"; depends=[affy]; }; + AneuFinderData = derive2 { name="AneuFinderData"; version="1.6.0"; sha256="0cbgmfciy9v81jfn60mw98csxxdmm3hfqdwyaigbagj949alnbcm"; depends=[]; }; + AshkenazimSonChr21 = derive2 { name="AshkenazimSonChr21"; version="1.8.0"; sha256="1z7kcl25hpl7r7pshz14cm5j635qj451df1pfd9giygn7y9kpf93"; depends=[]; }; + BeadArrayUseCases = derive2 { name="BeadArrayUseCases"; version="1.16.0"; sha256="1yslwgw504xbplq16xnf610rs994p23xm9qcyaa9f0lzhqgkksap"; depends=[beadarray GEOquery limma]; }; + CCl4 = derive2 { name="CCl4"; version="1.16.0"; sha256="0w1mxf7w1yk7kjqam7xdb11aj16pddk9wyfd1ps0nqagzvjsn1qv"; depends=[Biobase limma]; }; + CLL = derive2 { name="CLL"; version="1.18.0"; sha256="1zhkf75bhx8z0s4wpjyc0xdv9aifng25gpb8fkvncpd8lmmdg6gd"; depends=[affy Biobase]; }; + COHCAPanno = derive2 { name="COHCAPanno"; version="1.14.0"; sha256="082cwdyzq3h1sl39pn2c3ix5cp6mjczbvvdh6gii54181qkg8r2h"; depends=[]; }; + CONFESSdata = derive2 { name="CONFESSdata"; version="1.6.0"; sha256="1ln3s3zk4yi7qjjqnvxg12x7qlnz77k29nbjv5zbpdxdjyisnq4g"; depends=[]; }; + COPDSexualDimorphism_data = derive2 { name="COPDSexualDimorphism.data"; version="1.14.0"; sha256="1qi0l4rf62gzqg14zalcrisklfgbzahhzahyyd5q898r57xgif7b"; depends=[]; }; + COSMIC_67 = derive2 { name="COSMIC.67"; version="1.14.0"; sha256="11ir7v1xlxwjxjj1dz3i7j1fmq9xnhd3qc7cxippr0w4867cw8pc"; depends=[GenomicRanges SummarizedExperiment VariantAnnotation]; }; + CRCL18 = derive2 { name="CRCL18"; version="0.112.0"; sha256="1c6lvzjddm2sxxjz452nmaadhvaz684i3gyvmlibhqaxc9vr09mx"; depends=[Biobase]; }; + CardinalWorkflows = derive2 { name="CardinalWorkflows"; version="1.10.0"; sha256="0jlikfjgmjiizm28srbws7sq1b7h45gb22m4q19il13rdpn6rfls"; depends=[Cardinal]; }; + CellMapperData = derive2 { name="CellMapperData"; version="1.4.0"; sha256="064hbkwxfl2sb4vvvmm44skd34g87vgw6nv0ml8vyhba5mmszf84"; depends=[CellMapper ExperimentHub]; }; + ChAMPdata = derive2 { name="ChAMPdata"; version="2.10.0"; sha256="0cjwyapqv4d6mncg4jy1x5qfz7sim9vqv6m007d0n05ly02qn4vd"; depends=[BiocGenerics GenomicRanges]; }; + ChIPXpressData = derive2 { name="ChIPXpressData"; version="1.16.0"; sha256="0bj7j6qzqq6zy87r1sxdnlfqvl5r6rwjm5pd09jf9b27r6bf1r44"; depends=[bigmemory]; }; + ChIPexoQualExample = derive2 { name="ChIPexoQualExample"; version="1.2.0"; sha256="1f1dwqylch21kch88y96h41ma949y1xvfhj5ldqkn4fidb2f90kp"; depends=[]; }; + ChimpHumanBrainData = derive2 { name="ChimpHumanBrainData"; version="1.16.0"; sha256="1ppybav3ag2x75i1w58prnxvrmjp754ywwgm38kfw3vs55l0ijv4"; depends=[affy hexbin limma qvalue statmod]; }; + ConnectivityMap = derive2 { name="ConnectivityMap"; version="1.14.0"; sha256="02xffm790lchv78qwxgi0rfmk496hdc2970mm1maa7agy9wk56f8"; depends=[]; }; + CopyhelpeR = derive2 { name="CopyhelpeR"; version="1.10.0"; sha256="1gbvk32kcax4w143ry8w376gfglqm128sas0pnim4nc1ikd7b7j7"; depends=[]; }; + DAPARdata = derive2 { name="DAPARdata"; version="1.8.0"; sha256="0rkf6gwcvccci7hal5cxb04b7g8cx46ivvzplgfn5sn4idzj187f"; depends=[knitr MSnbase]; }; + DLBCL = derive2 { name="DLBCL"; version="1.18.0"; sha256="19bxaapggfx148qvi1jp82026psiv669iga370bqva4dhawgmc8a"; depends=[Biobase]; }; + DMRcatedata = derive2 { name="DMRcatedata"; version="1.14.0"; sha256="1i1cf4avmq6rrcvskj17gmplfa647fvmml86wkr8skhsj03z5s63"; depends=[GenomicRanges]; }; + DREAM4 = derive2 { name="DREAM4"; version="1.14.0"; sha256="1z1cddkk8jspnm3h1d4fdc6v14sqflzryqzvvzd0z3fp4lr46vkb"; depends=[SummarizedExperiment]; }; + DeSousa2013 = derive2 { name="DeSousa2013"; version="1.14.0"; sha256="0jwddzfqfiimcfmz9jwari493dppyxnyf0fp2k2s1bp98d50bnfb"; depends=[affy AnnotationDbi Biobase cluster ConsensusClusterPlus frma frmaTools gplots hgu133plus2_db hgu133plus2frmavecs pamr rgl ROCR siggenes survival sva]; }; + DmelSGI = derive2 { name="DmelSGI"; version="1.10.0"; sha256="066davl2ga9pjl12zcgchmsprx3hz6zsb2zpnrpbijd0yqv8fjih"; depends=[abind gplots igraph knitr limma rhdf5 TSP]; }; + DonaPLLP2013 = derive2 { name="DonaPLLP2013"; version="1.16.0"; sha256="1za9anbfb36c1js2qhgqgxsjmkxfhkzyfyizzvqn1v31r101hsq7"; depends=[EBImage]; }; + DrugVsDiseasedata = derive2 { name="DrugVsDiseasedata"; version="1.14.0"; sha256="0315kbc8fsn95325jlr2b83094f4mnk4pc5sihw0n0637nfpy7ks"; depends=[]; }; + DvDdata = derive2 { name="DvDdata"; version="1.14.0"; sha256="0chiajirlaf8b28nhr315429hp2x7mfff7fkax9kqrfz308xbcv1"; depends=[]; }; + EGSEAdata = derive2 { name="EGSEAdata"; version="1.6.0"; sha256="1fvfs8bnf41fz2skahj4gxczqkgspnga84rlsrgd0shhrkmns9hx"; depends=[]; }; + ELMER_data = derive2 { name="ELMER.data"; version="2.2.2"; sha256="1w1zs37bsj1c6ywvdbjqilg5wndnmysb0w6sbaashd39z6w9iwpa"; depends=[GenomicRanges]; }; + EatonEtAlChIPseq = derive2 { name="EatonEtAlChIPseq"; version="0.16.0"; sha256="19id2z2mzjjnxa956ppjhjq1a4gk916cd7k9cqs39lsbxvknp7nr"; depends=[GenomicRanges rtracklayer ShortRead]; }; + FANTOM3and4CAGE = derive2 { name="FANTOM3and4CAGE"; version="1.14.0"; sha256="1bkgj1czb6ap7xx53bzwrd4azbfkpxcznmdvl4q7jgd34l1ms78a"; depends=[]; }; + FIs = derive2 { name="FIs"; version="1.6.0"; sha256="1b6cvzljgcpq9vzs92yjnnxm741ypjw13c9lnzh3qjv73nfgp5l9"; depends=[]; }; + Fletcher2013a = derive2 { name="Fletcher2013a"; version="1.14.0"; sha256="1c0zdhk81g30v7yq6xvhanmb550xdaann6f4sskbvy5fa6kb04gz"; depends=[Biobase gplots limma VennDiagram]; }; + Fletcher2013b = derive2 { name="Fletcher2013b"; version="1.14.0"; sha256="081ki0yjdqngsdibpjnjs8lk10wfvgr9i5i99c837hl9wgfwd9v4"; depends=[Fletcher2013a igraph RColorBrewer RedeR RTN]; }; + FlowSorted_Blood_450k = derive2 { name="FlowSorted.Blood.450k"; version="1.16.0"; sha256="09sb67dnv97ijljayiny3p45ddd2c01pd8pjj15sjjk8717lf65v"; depends=[minfi]; }; + FlowSorted_CordBlood_450k = derive2 { name="FlowSorted.CordBlood.450k"; version="1.6.0"; sha256="16wvbfym2mz9ypmym2j3j5f36vdj100anc5hpwvpzh9ing62b00r"; depends=[minfi]; }; + FlowSorted_CordBloodNorway_450k = derive2 { name="FlowSorted.CordBloodNorway.450k"; version="1.4.0"; sha256="06f2zmkqzkrhwdx58pxzcvkqbckzg9k6qjlngbmgnnb9mi0hx8l3"; depends=[minfi]; }; + FlowSorted_DLPFC_450k = derive2 { name="FlowSorted.DLPFC.450k"; version="1.14.0"; sha256="19h4xvlsl61bpkdqqfrqw4iz9v0pnfxp1q8z9nn9m9wqf9cc3rkc"; depends=[minfi]; }; + FunciSNP_data = derive2 { name="FunciSNP.data"; version="1.14.0"; sha256="0zsffyhd9nxsg3a34sd2mycbvs8dsw96pqn1jj7zw5whldjihjwh"; depends=[IRanges rtracklayer]; }; + GGdata = derive2 { name="GGdata"; version="1.16.0"; sha256="0s5wh3nxynxx4skgyxvbm4l7lk6rphcgwh71nr24a0a4jid0jisp"; depends=[AnnotationDbi Biobase GGBase illuminaHumanv1_db snpStats]; }; + GSBenchMark = derive2 { name="GSBenchMark"; version="0.112.0"; sha256="10f5g78mqlzm3ygix8h08134k41c7k9l3j39q656jpdwmf3plkh0"; depends=[]; }; + GSE62944 = derive2 { name="GSE62944"; version="1.6.0"; sha256="031x9w6xcgk30ihmgxxlxrn0xjm076s34cfyhw5pap6f3f0x8hi6"; depends=[Biobase GEOquery]; }; + GSVAdata = derive2 { name="GSVAdata"; version="1.14.0"; sha256="1zqm9g1vib9r6rsj7wim2pkv17pl1136k3k5rxmyvgx7rl1sb5li"; depends=[Biobase GSEABase hgu95a_db]; }; + GWASdata = derive2 { name="GWASdata"; version="1.16.0"; sha256="15zki8i7mv59xr6rgfmf0x33mkvf8fv6h5ya35iydx5409lyaxm8"; depends=[GWASTools]; }; + GeuvadisTranscriptExpr = derive2 { name="GeuvadisTranscriptExpr"; version="1.6.0"; sha256="02vwxdb4dsmx3iw3p8hfvigw67hrggycdxkqpkr1n03z6g50vbcv"; depends=[]; }; + HD2013SGI = derive2 { name="HD2013SGI"; version="1.18.0"; sha256="102hv9ivrmdjfrqnyg9g3qi4y2i9kdby9xswlq5l7l14vbgqxn6b"; depends=[EBImage geneplotter gplots limma LSD RColorBrewer splots vcd]; }; + HEEBOdata = derive2 { name="HEEBOdata"; version="1.16.0"; sha256="1spmx6lc0cpcwcna2sm5mn27n66rxpzw30biq11ca2j7ax0phh8v"; depends=[]; }; + HIVcDNAvantWout03 = derive2 { name="HIVcDNAvantWout03"; version="1.18.0"; sha256="12gi6idn1vgl13ir93ig60mmgfak5l35bgzc75paa167iqvfswff"; depends=[]; }; + HSMMSingleCell = derive2 { name="HSMMSingleCell"; version="0.112.0"; sha256="0wz7kfj2mkrg4q53w3ddj2l4didlmckkck5a80vk51pflfvxrdhi"; depends=[]; }; + HarmanData = derive2 { name="HarmanData"; version="1.6.0"; sha256="104ws2bpy865m2hjfgj1bha4ix6kk96ml085lksz9vszkxhi7al9"; depends=[]; }; + HarmonizedTCGAData = derive2 { name="HarmonizedTCGAData"; version="1.0.0"; sha256="03czwi1ps7lpjppn5mpfa013rna0z3ywb783a31yv7g93r97gqna"; depends=[ExperimentHub]; }; + HelloRangesData = derive2 { name="HelloRangesData"; version="1.4.0"; sha256="1c7gfhwr9g6hv0p3s4yd8v9rhjp3jmrnzsqsqq4ysc2i24nf7drr"; depends=[]; }; + HiCDataHumanIMR90 = derive2 { name="HiCDataHumanIMR90"; version="0.112.0"; sha256="1qxg7650lbfbjl9p75clrybsdbzd0yzpi8pi2biv83jgqkkjrd0b"; depends=[]; }; + HiCDataLymphoblast = derive2 { name="HiCDataLymphoblast"; version="1.14.0"; sha256="0708xgm495a330h70yi2qd494h6gf0n46j016mw9bc4gzbb7aq9p"; depends=[]; }; + Hiiragi2013 = derive2 { name="Hiiragi2013"; version="1.14.0"; sha256="0lah9l8gd5gs1wj68l9hqakcwha0rl88dg2p0zk92nff64jxn3pj"; depends=[affy Biobase boot clue cluster genefilter geneplotter gplots gtools KEGGREST lattice latticeExtra MASS mouse4302_db RColorBrewer xtable]; }; + HumanAffyData = derive2 { name="HumanAffyData"; version="1.4.0"; sha256="0xgb3rrvgrx6sdwbb8gb1q8mgf0s2giih8l8d3hzvnxazh80qs8b"; depends=[Biobase ExperimentHub]; }; + IHWpaper = derive2 { name="IHWpaper"; version="1.6.0"; sha256="08gkdi1lra9mn1cbsqddqn3pwj3pfy2yfgzay5igr7n1akfmgh7k"; depends=[Biobase BiocGenerics BiocParallel cowplot DESeq2 dplyr fdrtool genefilter ggplot2 IHW qvalue Rcpp SummarizedExperiment]; }; + ITALICSData = derive2 { name="ITALICSData"; version="2.16.0"; sha256="1rrfxc3hzlq2i0z5j432w3s33ln56i91a06q49piisz06vviz6yv"; depends=[]; }; + Illumina450ProbeVariants_db = derive2 { name="Illumina450ProbeVariants.db"; version="1.14.0"; sha256="12mdy4rb8gzhgdqdwvf96lcxmi37wysyanpw1dym03vq6fxmcfrq"; depends=[]; }; + IlluminaDataTestFiles = derive2 { name="IlluminaDataTestFiles"; version="1.16.0"; sha256="149ip8wvbiz2k94rj6n1ims4iq7zkgicrxrkn059bvxgj5gm6pvq"; depends=[]; }; + Iyer517 = derive2 { name="Iyer517"; version="1.20.0"; sha256="1s4ya32pfmz3fil7v3r8zm13f80cx5zny0ywvh6ln27a7hr10ida"; depends=[Biobase]; }; + JASPAR2014 = derive2 { name="JASPAR2014"; version="1.14.0"; sha256="03mrbgyx3jf4ccapyj04akf40aqbmky03fgicgcaff724kwda8rl"; depends=[Biostrings]; }; + JASPAR2016 = derive2 { name="JASPAR2016"; version="1.6.0"; sha256="0ki62mfjk7a6nsk0079xf3w8c8an3syy5rhlqcmyynwab344mqm6"; depends=[]; }; + JctSeqData = derive2 { name="JctSeqData"; version="1.8.0"; sha256="1zd270pxiy1d5jr9akgvf77jbllw82flrhx3q1z1m0kds7xlb398"; depends=[]; }; + KEGGandMetacoreDzPathwaysGEO = derive2 { name="KEGGandMetacoreDzPathwaysGEO"; version="0.112.0"; sha256="0w1x4ab9i40y8jp3yhwcv0lyh83g926cwav77m179mg7n9l6c3lv"; depends=[Biobase BiocGenerics]; }; + KEGGdzPathwaysGEO = derive2 { name="KEGGdzPathwaysGEO"; version="1.16.0"; sha256="034j38cd81fkay7h7fjjk56ywhvbq6pdc0ldxizrfw3z8hhacy85"; depends=[Biobase BiocGenerics]; }; + KOdata = derive2 { name="KOdata"; version="1.4.0"; sha256="1difb3nsalc5rl9bbaj0g99d5sl3sjlmcy4qq0mddaagw4b5lyrr"; depends=[]; }; + LiebermanAidenHiC2009 = derive2 { name="LiebermanAidenHiC2009"; version="0.16.0"; sha256="1z86ll0kpmd9jq5nq7fi2yhvp3ifqfmjk7gfpgd2mq28zw8rwn47"; depends=[IRanges KernSmooth]; }; + ListerEtAlBSseq = derive2 { name="ListerEtAlBSseq"; version="1.10.0"; sha256="18k3m8k0jdry8qih7nrd7sxlvpcv1yfjj1a6y6a2ifmjq23ymcsl"; depends=[methylPipe]; }; + LungCancerACvsSCCGEO = derive2 { name="LungCancerACvsSCCGEO"; version="1.14.0"; sha256="0x0rl6iibspl9w82kbbv7bf9mfhs60j8ly7cxm908x5xfzwmms05"; depends=[]; }; + LungCancerLines = derive2 { name="LungCancerLines"; version="0.16.0"; sha256="12k305wv38grgdkypr7bvhxd1ca1vsxmyz7487yfv1nl72sla36a"; depends=[Rsamtools]; }; + M3DExampleData = derive2 { name="M3DExampleData"; version="1.4.0"; sha256="0wq5vmk8p3ng8snljrlkwx6vl38fnwq8fn5flymfnq1snvci22h2"; depends=[]; }; + MAQCsubset = derive2 { name="MAQCsubset"; version="1.16.0"; sha256="06vmzicndnyb4banfjv2mgy77cqqbdrx0y7pxyvvpfy5xl1kk3ii"; depends=[affy Biobase lumi]; }; + MAQCsubsetAFX = derive2 { name="MAQCsubsetAFX"; version="1.16.0"; sha256="0jfq8pc2arpp5kcdhsgvz08nm7sjambh7sx1n204glqm61mv5rqw"; depends=[affy Biobase]; }; + MAQCsubsetILM = derive2 { name="MAQCsubsetILM"; version="1.16.0"; sha256="14p1ifaadmkpykgh675gk03aspc1159k8s9ksz17p6bxkwy2sb6v"; depends=[Biobase lumi]; }; + MEALData = derive2 { name="MEALData"; version="1.8.0"; sha256="0r4c7vx2cpix5ryjv7314zf30ifivad7yj1wi7a0pck6rjbny81j"; depends=[]; }; + MEDIPSData = derive2 { name="MEDIPSData"; version="1.14.0"; sha256="175bzk0yrwhkwagpkvi8y87l8zfhgr44xkpkw4jii3whpyxgaiyx"; depends=[]; }; + MEEBOdata = derive2 { name="MEEBOdata"; version="1.16.0"; sha256="1110sgklk2lmvjggvcm3wzfipij6nj8brq7bdc9dbjwhiiqdv0m1"; depends=[]; }; + MIGSAdata = derive2 { name="MIGSAdata"; version="1.2.0"; sha256="0vx8p949sxsfp9ajs4dwh2yf01l9lclngr7ync3r962knmd74yc6"; depends=[]; }; + MMDiffBamSubset = derive2 { name="MMDiffBamSubset"; version="1.14.0"; sha256="1s0fraym521bv35q2ms1v6jv23bvfypwkhcy8ffhf6k1lcr4q7gj"; depends=[]; }; + MSBdata = derive2 { name="MSBdata"; version="0.16.0"; sha256="0lygk817f55agf4rvb85k50ns0cy8wckbqvwqb3w22z4plixyjjf"; depends=[]; }; + MSstatsBioData = derive2 { name="MSstatsBioData"; version="1.0.0"; sha256="1hgwcd4r8x489hyz747psyw4jfbia6yw5mjrm745z1yl8y445mq9"; depends=[]; }; + MUGAExampleData = derive2 { name="MUGAExampleData"; version="0.112.0"; sha256="05gjfd4vvkp4mdrimsxjwa3mgps1cwdwr03w1il77awa23fvqp52"; depends=[]; }; + MethylAidData = derive2 { name="MethylAidData"; version="1.10.0"; sha256="1rklalmjckm5ysvfjy4arqafabjp8w4495v385mgwrlv6rqa5yv7"; depends=[MethylAid]; }; + Mulder2012 = derive2 { name="Mulder2012"; version="0.18.0"; sha256="1bpc74xiyh1az8nkgqpwk3pa2313r7qcxdzdqa7sr8drwhgj7hbi"; depends=[HTSanalyzeR igraph KEGG_db MASS org_Hs_eg_db PANR pvclust RedeR]; }; + NCIgraphData = derive2 { name="NCIgraphData"; version="1.14.0"; sha256="0764l9lxc64fjflzqqxyjckxrsjxk89k73g3kpdfmkvxdn7nchh7"; depends=[]; }; + NGScopyData = derive2 { name="NGScopyData"; version="0.112.0"; sha256="073g9krsmhdh3fygqd3rfxnakxn45nvxs0zr7k6xylq06yfy3gza"; depends=[]; }; + Neve2006 = derive2 { name="Neve2006"; version="0.16.0"; sha256="0dvdq54jp5q59iwny008m1qyj9s6gb4blmzjlsnz3505ivai2mgs"; depends=[annotate Biobase hgu133a_db]; }; + OnassisJavaLibs = derive2 { name="OnassisJavaLibs"; version="1.0.0"; sha256="1wffaljwgl0r051bj5vf0wjch2vg5y8pkwgbhdg6k6c97pf9gyd7"; depends=[rJava]; }; + PCHiCdata = derive2 { name="PCHiCdata"; version="1.6.0"; sha256="1dqhwz6jqgmnvias2hjlnj10c0chsvhj904rgvk0ch9y47v0f4yx"; depends=[Chicago]; }; + PGPC = derive2 { name="PGPC"; version="1.6.0"; sha256="1nfkj3ipl52xscz8qpmaspydvfzsjacrw89alhxpgsb71d59nbkj"; depends=[ChemmineR EBImage geneplotter ggplot2 gplots imageHTS limma plyr RColorBrewer reshape2 SearchTrees splots]; }; + PREDAsampledata = derive2 { name="PREDAsampledata"; version="0.18.0"; sha256="19528l0f53nfnq1sdsbp3y6z5zx933csz5f72mh43408a6d384rk"; depends=[affy annotate Biobase PREDA]; }; + PWMEnrich_Dmelanogaster_background = derive2 { name="PWMEnrich.Dmelanogaster.background"; version="4.12.0"; sha256="0s3dqm1yiy4svkb6cj6xf6i81cc0mai0xjlbl3jvqdpy7npl0a08"; depends=[PWMEnrich]; }; + PWMEnrich_Hsapiens_background = derive2 { name="PWMEnrich.Hsapiens.background"; version="4.12.0"; sha256="14wqs4lxq1zav24znvqmkzbbqfapplg7xib9kbcxnqxkr509x4fz"; depends=[PWMEnrich]; }; + PWMEnrich_Mmusculus_background = derive2 { name="PWMEnrich.Mmusculus.background"; version="4.12.0"; sha256="1zmrv53944s7a6cm96m2wgj6j9cfg5kjwgdfalkmii3vm400f6lr"; depends=[PWMEnrich]; }; + PasillaTranscriptExpr = derive2 { name="PasillaTranscriptExpr"; version="1.6.0"; sha256="0wxf6p5r7h9zaxkzg1bf294d837klwscbd0gcxms26hgdj7pv2d1"; depends=[]; }; + PathNetData = derive2 { name="PathNetData"; version="1.14.0"; sha256="1k5npvxijzf3f7fxkmljajmjmfpkd36q8a2zpn24c4v19vglnmzx"; depends=[]; }; + ProData = derive2 { name="ProData"; version="1.16.0"; sha256="0vgs9xnwrqfn8px4c4q0y3kxfwk5zldwpykdhkjn63ycamlfmq25"; depends=[Biobase]; }; + PtH2O2lipids = derive2 { name="PtH2O2lipids"; version="1.4.0"; sha256="1qilqzfmhb4fq2rkafy200s94gaj9ln6c0j8gw3q5ql6kzclkq2i"; depends=[CAMERA LOBSTAHS xcms]; }; + QDNAseq_hg19 = derive2 { name="QDNAseq.hg19"; version="1.8.0"; sha256="13b72z76z5nqb2snga4rn0jrsd12c13x4b1q9i15j2lxnklcw11w"; depends=[QDNAseq]; }; + QDNAseq_mm10 = derive2 { name="QDNAseq.mm10"; version="1.8.0"; sha256="17azrrn9fkiq1z4xxcg2afwh25iyvi93lq9p13zcpzg75fx5ccvc"; depends=[QDNAseq]; }; + QUBICdata = derive2 { name="QUBICdata"; version="1.6.0"; sha256="01i0n2sbi3l5gmkrvnc5r1c3fv57xli1fav7yal1x6vckqgma2ba"; depends=[]; }; + RIPSeekerData = derive2 { name="RIPSeekerData"; version="1.14.0"; sha256="0znhpk57bivhn94vd1czcrhcigi8wcascx9ycvbvfnbnibpwcsac"; depends=[RIPSeeker]; }; + RITANdata = derive2 { name="RITANdata"; version="1.2.0"; sha256="0jl1grvgmrvvv5f4p0s6ypcpfbdlrc1s0pqqib7fw1qi1hmik5rj"; depends=[]; }; + RMassBankData = derive2 { name="RMassBankData"; version="1.16.0"; sha256="15i1yy7vhwbz3vjkcdgybqaiwr3x7w9fplscachb3xpw6d5g52n0"; depends=[]; }; + RNAinteractMAPK = derive2 { name="RNAinteractMAPK"; version="1.16.0"; sha256="0z3ijyvkajpa08d6i1lb1bfkfwhqkjizwn17hrinps3k9bzymni6"; depends=[fields gdata genefilter MASS RNAinteract sparseLDA]; }; + RNAseqData_HNRNPC_bam_chr14 = derive2 { name="RNAseqData.HNRNPC.bam.chr14"; version="0.16.0"; sha256="06ja4rm3f310vj1sa473njsgaagmr3zz04pj3qp5cpq1pdcgsmfi"; depends=[]; }; + RRBSdata = derive2 { name="RRBSdata"; version="0.112.0"; sha256="1vjh1x652ll33sjahair95n1l98z847ks2907g84sbkwhvfzhkrm"; depends=[BiSeq]; }; + RTCGA_CNV = derive2 { name="RTCGA.CNV"; version="1.6.0"; sha256="0grqjfiwi9i6whgiz73xz2havcwzjf3r23rg5wvxhk1bapxidxgv"; depends=[RTCGA]; }; + RTCGA_PANCAN12 = derive2 { name="RTCGA.PANCAN12"; version="1.6.0"; sha256="02mr0kn5hf2nqi2s7lk440c6a3n34a8apb1j7rpi8nxp4lp757if"; depends=[RTCGA]; }; + RTCGA_RPPA = derive2 { name="RTCGA.RPPA"; version="1.6.0"; sha256="1mjxpdwziv0xy00hn0n7r0bvgh1gagrw77b5jnla3pz0nzhqwwhy"; depends=[RTCGA]; }; + RTCGA_clinical = derive2 { name="RTCGA.clinical"; version="20151101.8.0"; sha256="03m4rzzwmjzj1ijg10ir1d5nmix04l0mi2jkddiqgq8ryl231dk2"; depends=[RTCGA]; }; + RTCGA_mRNA = derive2 { name="RTCGA.mRNA"; version="1.6.0"; sha256="0v4z9hi9n8fxlk1gph7xapz2sgrakzm32xvl4qyjvqcfzmrvsjzy"; depends=[RTCGA]; }; + RTCGA_methylation = derive2 { name="RTCGA.methylation"; version="1.6.0"; sha256="1dcqjfkjncxa32j2dp1dlhfl7cjlr5gpzsxvbals420sqn6pbh0b"; depends=[RTCGA]; }; + RTCGA_miRNASeq = derive2 { name="RTCGA.miRNASeq"; version="1.6.0"; sha256="0iydym4bggbdwcnb916wqx9d8xxdm3aqbilknf31fvn7gyx76n5x"; depends=[RTCGA]; }; + RTCGA_mutations = derive2 { name="RTCGA.mutations"; version="20151101.8.0"; sha256="1jyg1h1g6bkz0rvpsb0y2ksx2k8s1lm6i9jrkj5b9p9sv28fdiz9"; depends=[RTCGA]; }; + RTCGA_rnaseq = derive2 { name="RTCGA.rnaseq"; version="20151101.8.0"; sha256="01s06w9aavgr19jf3kswxb2bg4v5r3j5md17j4qf698l82pjkigq"; depends=[RTCGA]; }; + RUVnormalizeData = derive2 { name="RUVnormalizeData"; version="0.112.0"; sha256="1sf4fbrgcmq4jy3g4kh8xlbmvvs6ww9s8p0z8cba2ga0v440nzk4"; depends=[Biobase]; }; + RforProteomics = derive2 { name="RforProteomics"; version="1.15.0"; sha256="1jjc0hs6nmx56l5gl5rgqkrpv3shdwl4qjvn25ayv6dbvxajifw3"; depends=[Biobase BiocInstaller biocViews interactiveDisplay MSnbase R_utils rpx shiny]; }; + RnBeads_hg19 = derive2 { name="RnBeads.hg19"; version="1.10.0"; sha256="0ixc2vhfm8y51p7iycr1mv98dacazj6f7bn5naffy607d9ryylb2"; depends=[GenomicRanges]; }; + RnBeads_hg38 = derive2 { name="RnBeads.hg38"; version="1.10.0"; sha256="14h4lqx8jymla7immhiisxkcch5pki26yk9ywgh2mwwkz5b3lmlr"; depends=[GenomicRanges]; }; + RnBeads_mm10 = derive2 { name="RnBeads.mm10"; version="1.10.0"; sha256="0adds1l1hp4cv98jzf4jp6rhwfyv63dnzcp7gzb91wq9wmmhh81w"; depends=[GenomicRanges]; }; + RnBeads_mm9 = derive2 { name="RnBeads.mm9"; version="1.10.0"; sha256="1a4389ds0kpq8q1brf7r7f368x7077qf1x53amixi4s15z3sqxzl"; depends=[GenomicRanges]; }; + RnBeads_rn5 = derive2 { name="RnBeads.rn5"; version="1.10.0"; sha256="1q7gqs3n9cv6fn95n79ir6p2jxccdx133az4f3ab198kxbdkn5bc"; depends=[GenomicRanges]; }; + RnaSeqSampleSizeData = derive2 { name="RnaSeqSampleSizeData"; version="1.10.0"; sha256="0mimmfhssjr1h2fb8h0m7gjaw5z80vsnzjlckx9cmirn9112z3iz"; depends=[edgeR]; }; + RnaSeqTutorial = derive2 { name="RnaSeqTutorial"; version="0.16.0"; sha256="0p11ykzr0ypxsn3y0dwpggm826dszl3jzplvpzs60xgplj178m20"; depends=[easyRNASeq]; }; + SCLCBam = derive2 { name="SCLCBam"; version="1.10.0"; sha256="1ivxp3pi9dskh2q331dfpc9vz8g3x82sickmhk86mnhr8zwbkx6w"; depends=[]; }; + SNAData = derive2 { name="SNAData"; version="1.24.0"; sha256="1384y6jj8w380qppd9n80s41vz2g7lrlmckjszga0csc1qxx8dd7"; depends=[graph]; }; + SNAGEEdata = derive2 { name="SNAGEEdata"; version="1.14.0"; sha256="08myr18h36rczaqvrg2ckhrkivayspcr8p6p4400ynmafk8ihkkz"; depends=[]; }; + SNPhoodData = derive2 { name="SNPhoodData"; version="1.8.0"; sha256="1v4cp21h05yi6n26by8nnwajk0kl7qjlh4n9c9r81g7m35qyz7ny"; depends=[]; }; + SVM2CRMdata = derive2 { name="SVM2CRMdata"; version="1.10.0"; sha256="1hf6lz6k6xvlda7pbp4k3y15a9bid5k3r1fv64slj2d7ahpcqzph"; depends=[]; }; + Single_mTEC_Transcriptomes = derive2 { name="Single.mTEC.Transcriptomes"; version="1.6.0"; sha256="01rm6rhi7izycsbf4qmpn8bnkklh6r7c19dnb3p4mrw14ykcxsf0"; depends=[]; }; + SomatiCAData = derive2 { name="SomatiCAData"; version="1.16.0"; sha256="118cdjbaydibr8vi7jgf3jys0izph8d7986gwnq9fawbswdbhpp8"; depends=[]; }; + SomaticCancerAlterations = derive2 { name="SomaticCancerAlterations"; version="1.14.0"; sha256="0nzvc808lr3yp1gs60ifyq6ig52fqp1wy1pxazjcdsrxajpm8hl4"; depends=[exomeCopy GenomicRanges IRanges S4Vectors stringr]; }; + SpikeIn = derive2 { name="SpikeIn"; version="1.20.0"; sha256="1i38m224mdak52cd469nnm7q7f7llmwym9h03ldcs2i9azxp5dix"; depends=[affy]; }; + SpikeInSubset = derive2 { name="SpikeInSubset"; version="1.18.0"; sha256="0byb8gh2s7wlfdcnq9fkr92w7lxwrz48nlzprxd5b4kj91j1fdq0"; depends=[affy Biobase]; }; + TBX20BamSubset = derive2 { name="TBX20BamSubset"; version="1.14.0"; sha256="1vdk2z4jljwy4kpiy0bkf5ymx0hrc16ardh5rg1xvkra58z79p2j"; depends=[Rsamtools xtable]; }; + TCGAMethylation450k = derive2 { name="TCGAMethylation450k"; version="1.14.0"; sha256="0nw9q0gkna2qja720hf766ppilxpi8m2plz68laxhzbc8bgq4g8v"; depends=[]; }; + TCGAWorkflowData = derive2 { name="TCGAWorkflowData"; version="1.2.1"; sha256="1ipl2lxwcp5ybzxw5hpa00c2syb5l8nnmdbdwchnbwj6j8gm97ly"; depends=[SummarizedExperiment]; }; + TCGAcrcmRNA = derive2 { name="TCGAcrcmRNA"; version="0.112.0"; sha256="1jpqpnyv3sc6pwh88gfpgc0dyypyi5fy1fim7ybggkc4zv2q69cf"; depends=[Biobase]; }; + TCGAcrcmiRNA = derive2 { name="TCGAcrcmiRNA"; version="0.112.0"; sha256="19965mwk4020xhs206n3gf8v85flf5qf2lnv6hsjfdsmi9clma4j"; depends=[Biobase]; }; + TargetScoreData = derive2 { name="TargetScoreData"; version="1.14.0"; sha256="1y39vdd7h90yw3rz68cbdv55hkw6a7d73ld0l8ihpy3l6ppqa2vz"; depends=[]; }; + TargetSearchData = derive2 { name="TargetSearchData"; version="1.16.0"; sha256="1zhwnpd2n5wydv7xi9ny8zx1riff3caj3lxr40g1fr1ps35vjdww"; depends=[TargetSearch]; }; + TimerQuant = derive2 { name="TimerQuant"; version="1.8.0"; sha256="0cryfc9qm6mnp0hnznqna372qi00cgjvc1793hrmnx9qkcyiszdf"; depends=[deSolve dplyr ggplot2 gridExtra locfit shiny]; }; + VariantToolsData = derive2 { name="VariantToolsData"; version="1.2.0"; sha256="0gp2ij4jbwmqhi76a2cnn7wrg227vzvdkwczcsdhawxdjkys8q7h"; depends=[BiocGenerics GenomicRanges VariantAnnotation]; }; + WES_1KG_WUGSC = derive2 { name="WES.1KG.WUGSC"; version="1.10.0"; sha256="0d3zixbpchvgzrrslsqgp784w3wswqlp50462ry8b871qaqvh16j"; depends=[]; }; + XhybCasneuf = derive2 { name="XhybCasneuf"; version="1.16.0"; sha256="0z9rfxr3w0rgd6hqp36i24590scng6hcs9k82am7hvnp54jd3zif"; depends=[affy ath1121501cdf RColorBrewer tinesath1cdf]; }; + affycompData = derive2 { name="affycompData"; version="1.16.0"; sha256="1l9mp2l41y1gbpv3yszq8bk5lrnbar8ga03ga14fsj1a4a3hzng9"; depends=[affycomp Biobase]; }; + affydata = derive2 { name="affydata"; version="1.26.0"; sha256="0ridqhk63d49wnsydf0iy5krnymgrjn3nxq7rnlzb85ryvcawqrx"; depends=[affy]; }; + airway = derive2 { name="airway"; version="0.112.0"; sha256="0b155g62xy39vr58ni6snskyssll8fv0zvn9jln41xacil7f5pmq"; depends=[SummarizedExperiment]; }; + alpineData = derive2 { name="alpineData"; version="1.4.0"; sha256="02fjs7liwh8m0n5hc0x51c7s718x3pv5a15qrf195bxsrx6qva47"; depends=[AnnotationHub ExperimentHub]; }; + antiProfilesData = derive2 { name="antiProfilesData"; version="1.14.0"; sha256="1255z9f75hbkzf6sbanck9rfm65z3vzg6kdjyyablh8wxbimjy2j"; depends=[Biobase]; }; + aracne_networks = derive2 { name="aracne.networks"; version="1.4.0"; sha256="1ahdk71ys4zf426swkyzmkaraz3lsjvn5dp4sdhxkxi5fmsx70mg"; depends=[viper]; }; + bcellViper = derive2 { name="bcellViper"; version="1.14.0"; sha256="1jw4lfh9p9m9q636jxq69lvjj859b6977k3jrdpjbr0nvr6phwkw"; depends=[Biobase]; }; + beadarrayExampleData = derive2 { name="beadarrayExampleData"; version="1.16.0"; sha256="0nbfxln9g8kl18ddzjsmcda1myymyk01ljm9x78cbjcnz6f4w3f5"; depends=[beadarray Biobase]; }; + beta7 = derive2 { name="beta7"; version="1.16.0"; sha256="0isvwy72d1764fq92h4315dxirvlp2crsgif9amcq13nv4rn40q6"; depends=[marray]; }; + biotmleData = derive2 { name="biotmleData"; version="1.2.0"; sha256="09vcahw61zz1pbydfl42c28da3y7002956vdb7nbssj6qnp62pqs"; depends=[]; }; + bladderbatch = derive2 { name="bladderbatch"; version="1.16.0"; sha256="0rmvlvhih00vvcjss8z31cfq5mqv7s7f2ysra7n9jrkb1hinzpmz"; depends=[Biobase]; }; + blimaTestingData = derive2 { name="blimaTestingData"; version="0.112.0"; sha256="1qqyv21bn5nf876f9l6xjmpx0jz1vrkk5swpp8wjkgsymcvni9fl"; depends=[]; }; + breastCancerMAINZ = derive2 { name="breastCancerMAINZ"; version="1.16.0"; sha256="0k5aqaiqzhxksfiwk2kzzwi7y0c07q8hm7fybn8i1zixvjd8iwfy"; depends=[]; }; + breastCancerNKI = derive2 { name="breastCancerNKI"; version="1.16.0"; sha256="1iw7apcpvivrqsircvxch1kh1xwqwf797d7psyz8iyckkd9kjwy0"; depends=[]; }; + breastCancerTRANSBIG = derive2 { name="breastCancerTRANSBIG"; version="1.16.0"; sha256="15l3x34xj07ja5xvwy9fsbsyccyfgqpxmghbcjvjl2j3lwfhfdb6"; depends=[]; }; + breastCancerUNT = derive2 { name="breastCancerUNT"; version="1.16.0"; sha256="098rjmq04ycfaj1yw116vgbll5656j5qk3xackidn4y0qkgqg9xy"; depends=[]; }; + breastCancerUPP = derive2 { name="breastCancerUPP"; version="1.16.0"; sha256="126w884byzkbafn1d1qjp7m27d6mck7d6l23daw41vlrcssxz236"; depends=[]; }; + breastCancerVDX = derive2 { name="breastCancerVDX"; version="1.16.0"; sha256="0pvn08jhfmnl530la1ldsks9681xci5ivrdawcq7ggh7bxld56q2"; depends=[]; }; + brgedata = derive2 { name="brgedata"; version="1.1.6"; sha256="0l2g7iwgm1jipz0vsik9dxsqslj7cv49y4mrxs4g9xsr2l9prm8i"; depends=[Biobase SummarizedExperiment]; }; + bronchialIL13 = derive2 { name="bronchialIL13"; version="1.16.0"; sha256="0v0k80zhjkilnj7f567zq6b994csyhqmmd1xbs3006jmnkbnf2ms"; depends=[affy]; }; + bsseqData = derive2 { name="bsseqData"; version="0.16.0"; sha256="11drh9nwk7af04nqgm4gn7lpsfxprg9z158l032jiclfv0dhkqgl"; depends=[bsseq]; }; + cMap2data = derive2 { name="cMap2data"; version="1.14.0"; sha256="002l5isc234cg6hs35rvl2iyql6azjvr7dc3rsp0z9nzh9gmzjrz"; depends=[]; }; + cancerdata = derive2 { name="cancerdata"; version="1.16.0"; sha256="15w2zy6cz4ivyw2j973x6alianqci1rqk2x3jzsjaadsij5bn6yd"; depends=[Biobase]; }; + ccTutorial = derive2 { name="ccTutorial"; version="1.16.0"; sha256="1k6f47hf18fwlmjk9k2rkym328q7kwam0yq7mlcavj3w59avydan"; depends=[affy Biobase Ringo topGO]; }; + ccdata = derive2 { name="ccdata"; version="1.4.0"; sha256="0srpibvjf89b8n8gf01njwg8gbi7a174y3fdcmxilfrfjqc9n2ib"; depends=[]; }; + ceu1kg = derive2 { name="ceu1kg"; version="0.16.0"; sha256="0dfbm2zyp140n57b9jn05li0bb3dz5cyilmdap2c28fjbyxrqdva"; depends=[Biobase GGBase GGtools]; }; + ceu1kgv = derive2 { name="ceu1kgv"; version="0.20.0"; sha256="1bl7b9ys59p9mk54vvsxravmq4xy9fxw3xadkbfdapyj79356r4p"; depends=[Biobase GGBase]; }; + ceuhm3 = derive2 { name="ceuhm3"; version="0.16.0"; sha256="0f8lcws55zixrpwi9m1cqcz0g9k2bvx67h09sxhswswaalqq83xv"; depends=[Biobase GGBase GGtools]; }; + cgdv17 = derive2 { name="cgdv17"; version="0.16.0"; sha256="1rq6dm0c1d395p7qixrnl7m3a7kzgih5bibxg65rngcs3fpjw3zh"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors VariantAnnotation]; }; + charmData = derive2 { name="charmData"; version="1.14.0"; sha256="1y3lrmc8pqdnn1kqzy7r1flqlhj8yjj74hlrj3m49bi9isbv1yip"; depends=[charm pd_charm_hg18_example]; }; + cheung2010 = derive2 { name="cheung2010"; version="0.16.1"; sha256="0xhv2zrzlhy4k828kq9rjw3slx1z30g0gwrnz2b9fgrnbd4f8fjd"; depends=[AnnotationDbi Biobase GenomicRanges GGtools hgfocus_db]; }; + chipenrich_data = derive2 { name="chipenrich.data"; version="2.2.0"; sha256="0iw4c60fpsixn6r5102s3422dlh1vxy4bdfnf8mf8l3893fgj0zc"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicRanges IRanges readr rtracklayer S4Vectors]; }; + chromstaRData = derive2 { name="chromstaRData"; version="1.4.0"; sha256="10ldrshic91rrjvrc7gi1lhqdnw9g3j00pz6vwhp6qnksr6lxdpi"; depends=[]; }; + cnvGSAdata = derive2 { name="cnvGSAdata"; version="1.14.0"; sha256="0j9jgjcsjr5vc0k0h7bjlvrln57zbl7pibdk7sxb1p56p49pngq4"; depends=[cnvGSA]; }; + colonCA = derive2 { name="colonCA"; version="1.20.0"; sha256="1b8kfpr2m5r286ah01jha8js4bvqxw0kk64k1gll96ydi1j6nx7d"; depends=[Biobase]; }; + curatedBladderData = derive2 { name="curatedBladderData"; version="1.14.0"; sha256="1xwg0m4iijvilhzc7sxspj06pm1ysldasv89yi2vskpilm5y1gci"; depends=[affy]; }; + curatedBreastData = derive2 { name="curatedBreastData"; version="2.6.0"; sha256="1x3wqxhafhbns7bngbbqzmjxw3rrb0a4xa2z7pdnlhxxij10mycd"; depends=[Biobase BiocStyle ggplot2 impute XML]; }; + curatedCRCData = derive2 { name="curatedCRCData"; version="2.10.0"; sha256="1h0wys79wr3csq93yvz6rzy964ydjyzfciwjp8099mxrbxsw538s"; depends=[BiocGenerics nlme]; }; + curatedMetagenomicData = derive2 { name="curatedMetagenomicData"; version="1.8.1"; sha256="1ip9v0v6lr7xg1j3zww99n0d5ar8l4d3c74mfhl9jg9c27vqcq95"; depends=[AnnotationHub Biobase dplyr ExperimentHub magrittr S4Vectors tidyr]; }; + curatedOvarianData = derive2 { name="curatedOvarianData"; version="1.16.0"; sha256="15d3g7snphvqh8cgry52lqz7v2l6icxznwcplvp73chkr8skqi38"; depends=[affy BiocGenerics]; }; + curatedTCGAData = derive2 { name="curatedTCGAData"; version="1.0.3"; sha256="19mm3psjmd6rzr34hcz1h5di8smqppnh73jqnqk6mnhgfy1i39ga"; depends=[AnnotationHub ExperimentHub MultiAssayExperiment S4Vectors]; }; + davidTiling = derive2 { name="davidTiling"; version="1.18.0"; sha256="1n7axspfh4ph911pj4x2r2dz1xmf6yk9hlnynx7pfmqlgzzcqcvy"; depends=[Biobase GO_db tilingArray]; }; + derfinderData = derive2 { name="derfinderData"; version="0.112.0"; sha256="0nv2n5417yp8bwdrswbpvni3fg58wl40425f58rdljm4rndk51if"; depends=[]; }; + diffloopdata = derive2 { name="diffloopdata"; version="1.6.0"; sha256="1ww6raiwr7ymjr4psrgf7q3f59vx32fcc0id9d414z5n8lr4krlr"; depends=[]; }; + diggitdata = derive2 { name="diggitdata"; version="1.10.0"; sha256="1w275zk4q5hfmjagdpmfa6xls82zkk34wz795lfnccg1bhvhvpj2"; depends=[Biobase viper]; }; + dressCheck = derive2 { name="dressCheck"; version="0.16.0"; sha256="0x5h4d0hpx1cdlbs2pmylvkhjl46j2vbw8m6za48iv5ksjaxh099"; depends=[Biobase]; }; + dsQTL = derive2 { name="dsQTL"; version="0.16.0"; sha256="02ha43xn2z085cyjq57d0n7919lj15bpy40kd0j9zwijyfrldz3s"; depends=[Biobase GGBase SummarizedExperiment]; }; + dyebiasexamples = derive2 { name="dyebiasexamples"; version="1.18.0"; sha256="07ggqj5bz8bna913ryb8wrb9jyr931nlpr5fggil35ms39xqf84f"; depends=[GEOquery marray]; }; + ecoliLeucine = derive2 { name="ecoliLeucine"; version="1.18.0"; sha256="0pk6livrn8wan6w44kxvhx2s5yjqf5x9gv5pj0mcldirr5fwkyh6"; depends=[affy ecolicdf]; }; + estrogen = derive2 { name="estrogen"; version="1.24.0"; sha256="0rjf95skgpznzwynfzc4mm5rs518x3ilqavz4250yp6g2yk81gdn"; depends=[]; }; + etec16s = derive2 { name="etec16s"; version="1.6.0"; sha256="0ms9f8925icf7ylrjz4akf147hii44qq9x3ddj0sy971a6ra8m1v"; depends=[Biobase metagenomeSeq]; }; + faahKO = derive2 { name="faahKO"; version="1.18.0"; sha256="0a43w7v0sn8z5qyjw0bdkn1jiwzsbxjhpjn9xr5lq1gba4wc15rh"; depends=[xcms]; }; + fabiaData = derive2 { name="fabiaData"; version="1.16.0"; sha256="0hrn14nwz7xvrd7v0s4b29s22kczj24jklc2yyvij5icjlnr436j"; depends=[Biobase]; }; + facopy_annot = derive2 { name="facopy.annot"; version="0.112.0"; sha256="0zd7li5yf6bl9vhpaj0sx8ilv7pqyaavscdrr1lw8y980qiggicm"; depends=[]; }; + facsDorit = derive2 { name="facsDorit"; version="1.20.0"; sha256="1ppmfkrsdcmd47vakd4kxr5y78387wjpyanlhv9pp741x1jiyf5m"; depends=[prada]; }; + ffpeExampleData = derive2 { name="ffpeExampleData"; version="1.16.0"; sha256="0jla2cblvkahm1qkszx14dmhsjbk5ywz7sbg14s4x5xf0rv537gk"; depends=[lumi]; }; + fibroEset = derive2 { name="fibroEset"; version="1.20.0"; sha256="1k32m49bhk30rbjryg77jhicjzga970p12wcy5bwzm0qxyj6wvqj"; depends=[Biobase]; }; + fission = derive2 { name="fission"; version="0.112.0"; sha256="0wgfb85pbs2q4wy59dqpnvvgw63kc9xr0smbjkp482nqv437vg15"; depends=[SummarizedExperiment]; }; + flowFitExampleData = derive2 { name="flowFitExampleData"; version="1.14.0"; sha256="02cziq2jskrz17s05myqj8w1dfd49crnsga9l19xi67n2gl0dl5k"; depends=[flowCore]; }; + flowPloidyData = derive2 { name="flowPloidyData"; version="1.4.0"; sha256="09gcy0qv1crz8vfk4s58x054sbhnnfv9mvh1k5vcmlckppimywwq"; depends=[]; }; + flowQBData = derive2 { name="flowQBData"; version="1.4.0"; sha256="1gvbykmmgl94vmd0g1fccdlshjycll5jvv8vg3h94kx7r3vq8ymi"; depends=[]; }; + flowWorkspaceData = derive2 { name="flowWorkspaceData"; version="2.14.0"; sha256="10q3nhcbmq75vk1z5zlqsp03d734qmkicsrc25nas2gnbzqmbhwx"; depends=[]; }; + frmaExampleData = derive2 { name="frmaExampleData"; version="1.14.0"; sha256="11h9hwif6hcc3jaipgf5dvjj3j2rcp61phhvxz45r563m494s83z"; depends=[]; }; + furrowSeg = derive2 { name="furrowSeg"; version="1.6.0"; sha256="0ds6x0a5qpp3c8776wbq1zbz17i5ymwxphf9zkxgsnrmjw3cpvvf"; depends=[abind dplyr EBImage locfit tiff]; }; + gageData = derive2 { name="gageData"; version="2.16.0"; sha256="18w5wdaq1j2mndyjfiflawf411zwh1hhjwcxaxrwqnl48p25vg5c"; depends=[]; }; + gaschYHS = derive2 { name="gaschYHS"; version="1.16.0"; sha256="1c9pq8b2mllpsvwyb7w0gwh66kkabrdfadsqd6hagszbyy9sw2v8"; depends=[Biobase]; }; + gatingMLData = derive2 { name="gatingMLData"; version="2.18.0"; sha256="1zlxzy9wzzqfm9brd70kdvki5d9r6lsqc22y0m469ybcxypzvan4"; depends=[]; }; + gcspikelite = derive2 { name="gcspikelite"; version="1.16.0"; sha256="0p0yxm9i4ynhcvshxywxf6d9lhcr32xp7677ywc6q0ikvr6733zp"; depends=[]; }; + geneLenDataBase = derive2 { name="geneLenDataBase"; version="1.14.0"; sha256="063ivzxw02j854ivv5yxdw7a637svadf9n2zwvc3783y4clkfqb6"; depends=[GenomicFeatures rtracklayer]; }; + genomationData = derive2 { name="genomationData"; version="1.10.0"; sha256="0h7g5x3kyb50qlblz5hc85lfm6n6f5nb68i146way3ggs04sqvla"; depends=[]; }; + geuvPack = derive2 { name="geuvPack"; version="1.10.0"; sha256="0lin7wz9xp7rx34wykpmsd5w7hf0jzzfbmnb4klrvlys1c5r9xr2"; depends=[SummarizedExperiment]; }; + geuvStore2 = derive2 { name="geuvStore2"; version="1.8.0"; sha256="1fhq0r3hnv6k4mfrdhjsaylfi96vwv7j74dkaad92li4pizcz04q"; depends=[BatchJobs GenomicRanges gQTLBase]; }; + golubEsets = derive2 { name="golubEsets"; version="1.20.0"; sha256="0zsylgc1ml9ddnd5r4magmhn7k3glz50aw9aqvf251zjycasncz5"; depends=[Biobase]; }; + grndata = derive2 { name="grndata"; version="1.10.0"; sha256="0gqxvngjbxjd40z855vcrc4lqhx9q3b4bgicc371dkglsls4rpgs"; depends=[]; }; + gskb = derive2 { name="gskb"; version="1.10.0"; sha256="0j36kbyxrrp5h2m7747kprdvhidpcmm14lmqkd1c97ykx5wnzhpr"; depends=[]; }; + h5vcData = derive2 { name="h5vcData"; version="1.112.0"; sha256="169sg12li7nzd2zv6rj28qc6xfh1l7l9ipybrqa8xyqlcjhpq85f"; depends=[]; }; + hapmap100khind = derive2 { name="hapmap100khind"; version="1.20.0"; sha256="02pyrd8i1agx31ww4sw6xcwmncibvhqbys072w80rlx3vbjymn3c"; depends=[]; }; + hapmap100kxba = derive2 { name="hapmap100kxba"; version="1.20.0"; sha256="0vp1wkbz4l9cxld9iazdi59mkrpvinjz6abf34rl7qzbqnckgygf"; depends=[]; }; + hapmap500knsp = derive2 { name="hapmap500knsp"; version="1.20.0"; sha256="1ddxp4adf5nlr96n89hqjv9f0jvm0zknmwpibp757ic6zrk262da"; depends=[]; }; + hapmap500ksty = derive2 { name="hapmap500ksty"; version="1.20.0"; sha256="07cmawlx9wdbyzjjj5wh2h1a32d3ascr9h8rpyg6z1pdriq8cahq"; depends=[]; }; + hapmapsnp5 = derive2 { name="hapmapsnp5"; version="1.20.0"; sha256="19wpwai8h0ix4cv17rgz4pz74b0qwby4jc5ry539fb8ls9rzvx1q"; depends=[]; }; + hapmapsnp6 = derive2 { name="hapmapsnp6"; version="1.20.0"; sha256="0qjfmjww0rdma3q2nh6ax64zl7adx4n9j0xhc9s19rz5drsdnifl"; depends=[]; }; + harbChIP = derive2 { name="harbChIP"; version="1.16.0"; sha256="1hzlxha4nlvqw8ml6pylcmb7y986718yg7ff8hn344yfcigpsqkb"; depends=[Biobase Biostrings IRanges]; }; + healthyFlowData = derive2 { name="healthyFlowData"; version="1.16.0"; sha256="00mjbla9cwj656s174xbfcdmi8gr1xs7vksazrx25m9yn3dw23jb"; depends=[flowCore]; }; + hgu133abarcodevecs = derive2 { name="hgu133abarcodevecs"; version="1.16.0"; sha256="1ffamwyl5fax5n6x4nc01gx4kazs73jsm239w943jkx2bwy5j2zf"; depends=[]; }; + hgu133plus2barcodevecs = derive2 { name="hgu133plus2barcodevecs"; version="1.16.0"; sha256="1blm93a5ll7pn1yhbrl8y6wb1yvfvfnc1zq96kr6id9wxi7bl9hl"; depends=[]; }; + hgu2beta7 = derive2 { name="hgu2beta7"; version="1.18.0"; sha256="15g6lmq6zfg2vkqliadqrmwivw2mldxlrf52myspmfl83scq973a"; depends=[]; }; + hmyriB36 = derive2 { name="hmyriB36"; version="1.14.0"; sha256="0g642694w0qsf27chdlw1g6924pm20kbgza4w57szcdnschabh52"; depends=[Biobase GGBase]; }; + humanStemCell = derive2 { name="humanStemCell"; version="0.18.0"; sha256="1nff23qa684xzy35d78sympkns7qa82c8cg21bgff3yhlw2ww2ws"; depends=[Biobase hgu133plus2_db]; }; + iontreeData = derive2 { name="iontreeData"; version="1.14.0"; sha256="1xj8psicl3yp17i7r6cg9v7rf1wvpz2kck7pbnhwppm7cshqang1"; depends=[]; }; + kidpack = derive2 { name="kidpack"; version="1.20.0"; sha256="007jlvpcwin2q09v4z79mnplz2176crgngana4mfpmx4sp4sh1lx"; depends=[Biobase]; }; + leeBamViews = derive2 { name="leeBamViews"; version="1.14.0"; sha256="1dvrfn3zwi5zl8fjp6kyqankqpzi2dhgzyj1dlp1bijy2y09lg7p"; depends=[Biobase BSgenome GenomicAlignments GenomicRanges Rsamtools]; }; + leukemiasEset = derive2 { name="leukemiasEset"; version="1.14.0"; sha256="1pya637a8yww5cm108w5l1ij2js9mx9mpq7d1miwqdqv2mi0liz6"; depends=[Biobase]; }; + lumiBarnes = derive2 { name="lumiBarnes"; version="1.18.0"; sha256="1jxk7abi7lkv8627vn9ydnmx6i4ycgicnl91j6r5gi0q3kffmmkq"; depends=[Biobase lumi]; }; + lungExpression = derive2 { name="lungExpression"; version="0.16.0"; sha256="09v9r6rmfcqprqd1rx53sa4dhjjmg6d9649vlhfhzkyc73yknwmb"; depends=[Biobase]; }; + lydata = derive2 { name="lydata"; version="1.4.0"; sha256="0dflfp14gdjgy7qf3my0vas5zbg77l16li7xgv1924cry11w2dxx"; depends=[]; }; + mAPKLData = derive2 { name="mAPKLData"; version="1.10.0"; sha256="1bfx4imb5yg17n0g1ag436zlks4jcp8ga0xj9wyh9bhx4miwyay4"; depends=[]; }; + mammaPrintData = derive2 { name="mammaPrintData"; version="1.14.0"; sha256="0ks72wnagdvnbilqcsvl5lbhgh64fhbfys0da03336f1z16f5lv9"; depends=[]; }; + maqcExpression4plex = derive2 { name="maqcExpression4plex"; version="1.22.0"; sha256="0hn20i11vl9x23mx283aki097r1a8rspagac821kmlwghyab1mxq"; depends=[]; }; + metaMSdata = derive2 { name="metaMSdata"; version="1.14.0"; sha256="1iygqxymvb98cm325bmdqb34n9b4k1vdzdyzcq8a0gh1dvs2m0iw"; depends=[]; }; + methyvimData = derive2 { name="methyvimData"; version="1.0.0"; sha256="1b2mvcawafkr15py8h9j10w5givifi99h9clbdmkgfyixbbh0m94"; depends=[minfi]; }; + miRNATarget = derive2 { name="miRNATarget"; version="1.16.0"; sha256="1ym4wg3g29z7yqmxfxq95yxwc5n048fw3m4bp7dwcq1agnjn5qa7"; depends=[Biobase]; }; + miRcompData = derive2 { name="miRcompData"; version="1.8.0"; sha256="0h4a3vwzbpzs7rnkn3qgpmfp08a8x8vyy78zb2zl0pgnni7yrdks"; depends=[]; }; + microRNAome = derive2 { name="microRNAome"; version="1.0.0"; sha256="13fwzf91hdy4vvxg47xkl78qk4jfgn9whj41gl3pqbgxkp7b3d2n"; depends=[SummarizedExperiment]; }; + minfiData = derive2 { name="minfiData"; version="0.24.0"; sha256="0j5f69k9s0mppb62cffj3kscvvmrrwhf6x3xsw3bc6qdk0f3sv67"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; }; + minfiDataEPIC = derive2 { name="minfiDataEPIC"; version="1.4.0"; sha256="12vxglizdyxk4hmj684cwfax4k1rwrz9lmm7khbqzhckzrgiqbny"; depends=[IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest minfi]; }; + minionSummaryData = derive2 { name="minionSummaryData"; version="1.8.0"; sha256="1dyr99wi3syzrr6vdxfcp7fjnx9p4gd6raj2r7x83r11g2rndpyn"; depends=[]; }; + mitoODEdata = derive2 { name="mitoODEdata"; version="1.14.0"; sha256="0vgmalrsnm616la3251p1fvcjpfg0wpv5zaxg20ikdc982zfk4sa"; depends=[]; }; + mosaicsExample = derive2 { name="mosaicsExample"; version="1.16.0"; sha256="0m2az0wv2lmdwa8c465cnfwmnmxmjz33ras984xbcvkh5a8i3gmw"; depends=[]; }; + mouse4302barcodevecs = derive2 { name="mouse4302barcodevecs"; version="1.16.0"; sha256="119z7vxd4yrfgjsd286iswklg0n07gzyckib3ivmm285hxphl79d"; depends=[]; }; + msPurityData = derive2 { name="msPurityData"; version="1.6.0"; sha256="1fpxy34gyngsz7rpr2ng77xb1bylj8s5i500mpbi765cva47lk11"; depends=[]; }; + msd16s = derive2 { name="msd16s"; version="0.112.0"; sha256="0ii7c6ynif55izkysw12vjphpkxyx3lvw0akfl18ypbiash3qf6h"; depends=[Biobase metagenomeSeq]; }; + msdata = derive2 { name="msdata"; version="0.18.0"; sha256="16wygr7g7vr3jsw9l6fzajid1cxffdww9pik5m4x55chdliq4f25"; depends=[]; }; + msqc1 = derive2 { name="msqc1"; version="1.6.0"; sha256="0csm35vzk9dp3gc8yfzli1rwanrah42yxsqssjfbvw5zcijs9npm"; depends=[lattice]; }; + mtbls2 = derive2 { name="mtbls2"; version="1.8.0"; sha256="1miqc8apjm8pvb9p4man688qnxpg04fqgidy7g9vr654hfc90gja"; depends=[]; }; + mvoutData = derive2 { name="mvoutData"; version="1.14.0"; sha256="0lwzsv8pmyyadnky9m0c3xf5dvm2qs8igkvrfaglsgl1wmymw86a"; depends=[affy Biobase lumi]; }; + pRolocdata = derive2 { name="pRolocdata"; version="1.16.0"; sha256="1pmz9vyvl3r8s6mfbd7k7vrz7qk1sv9136aykykvl139rsq7vwnz"; depends=[Biobase MSnbase]; }; + parathyroidSE = derive2 { name="parathyroidSE"; version="1.16.0"; sha256="1jd3fwri705b4i1wwnzx41idc2lvwai6mr7k78666wl6a8275hcn"; depends=[SummarizedExperiment]; }; + pasilla = derive2 { name="pasilla"; version="1.6.0"; sha256="0h6ll2csja5vnmylazb1qklz7ybk5hn0nxgkvxhhsmyqk9w7gk6m"; depends=[]; }; + pasillaBamSubset = derive2 { name="pasillaBamSubset"; version="0.16.0"; sha256="1rchf41zh44kzvim8iwvyfvgcfwv587p5p1yipgwf65hyc9sd0fv"; depends=[]; }; + pathprintGEOData = derive2 { name="pathprintGEOData"; version="1.4.0"; sha256="143an0hs22dbglmdc408mfch53zcskbf3a4jfgiajz3dml81flzl"; depends=[]; }; + pcaGoPromoter_Hs_hg19 = derive2 { name="pcaGoPromoter.Hs.hg19"; version="1.14.0"; sha256="137lj4j0hlz3mkwyf334xr3bpm9j2jg1cd2sw9203kx6hvk92i2z"; depends=[]; }; + pcaGoPromoter_Mm_mm9 = derive2 { name="pcaGoPromoter.Mm.mm9"; version="1.14.0"; sha256="0kb62bm1a8m88g59v6553qg69rmv0gh0wy4yfkqvn2sgz51zk4r4"; depends=[]; }; + pcaGoPromoter_Rn_rn4 = derive2 { name="pcaGoPromoter.Rn.rn4"; version="1.14.0"; sha256="0b3cak7nzd6qxr7gnly4246gjdhxyp8h0w5dr1xsgwd9zy1k0psw"; depends=[]; }; + pcxnData = derive2 { name="pcxnData"; version="1.0.0"; sha256="0bkzqac0b2x1f398bflv077dp6nb3ysdf75jcwxpj4nwyhcb7n4f"; depends=[]; }; + pd_atdschip_tiling = derive2 { name="pd.atdschip.tiling"; version="0.16.0"; sha256="1ilwm4nx232dll01xqqvagq3qi6qa060v84y20ihxhfwdm46z0ci"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; + pepDat = derive2 { name="pepDat"; version="0.112.0"; sha256="15v4yk9cpnz2k16ka4iyc61ji5ck9mlkabgzxalwfnz77ri23mk0"; depends=[GenomicRanges]; }; + plasFIA = derive2 { name="plasFIA"; version="1.6.0"; sha256="0p3pbjm5ww24ax7h72m38l0rcm01w5a4h8j5rsgynczvfv9jlwjq"; depends=[proFIA]; }; + ppiData = derive2 { name="ppiData"; version="0.16.0"; sha256="00wjgaihavx99qbcrx1sai2v35pm7kmkvybwdn7ndngvkzqixph5"; depends=[AnnotationDbi graph]; }; + prebsdata = derive2 { name="prebsdata"; version="1.14.0"; sha256="0rq90wrprj8xy60597dwq8ialjfyfcs8c2fgbskcm7ypba92brmp"; depends=[]; }; + prostateCancerCamcap = derive2 { name="prostateCancerCamcap"; version="1.6.0"; sha256="0f08mbwsac1nxvf4mwyjnwxd662rdibnzgrn8a0hcl1jmlsrkmg0"; depends=[Biobase]; }; + prostateCancerGrasso = derive2 { name="prostateCancerGrasso"; version="1.6.0"; sha256="0rk822avnfg3lydq9z995ki9zh7ch8ycg6nslxp8w5c3z4p447mk"; depends=[Biobase]; }; + prostateCancerStockholm = derive2 { name="prostateCancerStockholm"; version="1.6.0"; sha256="03min0za1paivvi45fl6nyksvhahpxlnqnkisj9312pb1x1gfm54"; depends=[Biobase]; }; + prostateCancerTaylor = derive2 { name="prostateCancerTaylor"; version="1.6.0"; sha256="01c519rp5jdphc9kqsdqcxsxkg00nhv3s82xlms6s0qdpibscx8m"; depends=[Biobase]; }; + prostateCancerVarambally = derive2 { name="prostateCancerVarambally"; version="1.6.0"; sha256="10qqsijkjwsw64am50vcjykxghgw51psq608yp9qj85l5d33kkmp"; depends=[Biobase]; }; + pumadata = derive2 { name="pumadata"; version="2.14.0"; sha256="0fsg1qcvfm2s7mpmwqih4pkgwphb4d1k8fah6gwvgc13q519ir2x"; depends=[affy Biobase oligo puma]; }; + rRDPData = derive2 { name="rRDPData"; version="0.112.0"; sha256="0305x1kkm5wbxcnw7kazrlhdjp91xrbxcvyypn6n0ga09ypk071l"; depends=[rRDP]; }; + rcellminerData = derive2 { name="rcellminerData"; version="2.0.0"; sha256="03j715sdprmdn1kazcyfy33nymz8kj52hxbv85a8bj3r2r1w6fzm"; depends=[Biobase]; }; + restfulSEData = derive2 { name="restfulSEData"; version="1.0.0"; sha256="1v7fvyabb8zjhzwpi1yamp0ch8zm32s820bfr366ir69dib66sa4"; depends=[ExperimentHub SummarizedExperiment]; }; + rheumaticConditionWOLLBOLD = derive2 { name="rheumaticConditionWOLLBOLD"; version="1.16.0"; sha256="06mfgsvzn2s30skrrqm4m76kb1bzp6aa52jfkz94gfam8ps1h1vf"; depends=[]; }; + sampleClassifierData = derive2 { name="sampleClassifierData"; version="1.2.0"; sha256="0bb4pjiljjixxvz9p59knwxmwr7g0334rs58r0j9w84v1g5prgwv"; depends=[SummarizedExperiment]; }; + scRNAseq = derive2 { name="scRNAseq"; version="1.4.0"; sha256="0jlcgna92mrcjz95r788falyhdpbfa75z2j7dy4jxdr0kd0gjrb6"; depends=[SummarizedExperiment]; }; + seq2pathway_data = derive2 { name="seq2pathway.data"; version="1.10.0"; sha256="01h6xhap2gbwgv3jwrzzciwd697x1vy6gaxmn0jlhvryy9qw9q05"; depends=[]; }; + seqCNA_annot = derive2 { name="seqCNA.annot"; version="1.14.0"; sha256="1g1lgzsrnf0j5yv2hlgilij1mzbz86pl3p3vd8pbkd61pdf4gxz2"; depends=[]; }; + seqc = derive2 { name="seqc"; version="1.12.0"; sha256="0dzfxx75lnrqh2ag9x7351c8xkkfrbvz8fqnigfslgrx01ydxs9y"; depends=[]; }; + serumStimulation = derive2 { name="serumStimulation"; version="1.14.0"; sha256="10pg5vp1np7n0n7maiizgx2kskm02ikfqvz6pxlz9mglhi1vss1l"; depends=[]; }; + seventyGeneData = derive2 { name="seventyGeneData"; version="1.14.0"; sha256="0643h4wlqmpsygawlh9mh1f889wp79adhlx9s1cqm2b5gggpsrli"; depends=[]; }; + shinyMethylData = derive2 { name="shinyMethylData"; version="0.112.0"; sha256="03y637yxglvy3jxydslwl9ivdc5r8ndph7anbzrmprzp6i481gj4"; depends=[]; }; + simpIntLists = derive2 { name="simpIntLists"; version="1.14.0"; sha256="1sdmcbx3yvgwhw8kilx3xa6ip0klyvia00plv1pyfwsl6ldnymvl"; depends=[]; }; + stemHypoxia = derive2 { name="stemHypoxia"; version="1.14.0"; sha256="0l6nfx1b97grxgq618zvb9ymysrl52r1ahr5ivav3znsnych0gl8"; depends=[]; }; + stjudem = derive2 { name="stjudem"; version="1.18.0"; sha256="1bxc1qzs6jcdfh87f6mzn9d1ih790i461267czzhsm9niha4q604"; depends=[]; }; + synapterdata = derive2 { name="synapterdata"; version="1.16.0"; sha256="1r1ldji1wnfsk772c00cwmx13xms90v9diqrqjilxbam9p30wr98"; depends=[synapter]; }; + systemPipeRdata = derive2 { name="systemPipeRdata"; version="1.6.0"; sha256="1j2kwczhqz26rf0ra34am32lbwp7rk13in1saf0kxd88m8qljksa"; depends=[BiocGenerics]; }; + tinesath1cdf = derive2 { name="tinesath1cdf"; version="1.16.0"; sha256="0a71k64y6yw4pxnbay478d27pfshnw96rslphvpkqaf48903b2fy"; depends=[]; }; + tinesath1probe = derive2 { name="tinesath1probe"; version="1.16.0"; sha256="088hrs6b65rxvw4d153fbk83w9p88mv5xfkwj4xziygibqy7lmpi"; depends=[AnnotationDbi]; }; + tofsimsData = derive2 { name="tofsimsData"; version="1.6.0"; sha256="030x882c38apa3n4vs9qj5a83sa8m183ifym60zqyms432k4xc70"; depends=[]; }; + topdownrdata = derive2 { name="topdownrdata"; version="1.0.0"; sha256="157vv89cidpcnliksfy4inds52j176724xydk0smykc6ny9wmas7"; depends=[topdownr]; }; + tweeDEseqCountData = derive2 { name="tweeDEseqCountData"; version="1.16.0"; sha256="17v27ir0a38y1h73nr8nib18bj8s2l6rbz5y15ly7pp2wkp5w0cm"; depends=[Biobase]; }; + tximportData = derive2 { name="tximportData"; version="1.6.0"; sha256="0l86z9nryhqzdqh6vn5krlkdhanhybr86z75l7lwg07k34nm8qcb"; depends=[]; }; + vulcandata = derive2 { name="vulcandata"; version="1.0.0"; sha256="0nka5sw9gp7nv09zdi4cq10k7k400padadq80xzxfzss91nwz23l"; depends=[]; }; + waveTilingData = derive2 { name="waveTilingData"; version="1.14.0"; sha256="0ndskrk78c8596gymcffdr5mbxi1x5046w8m83baa3vrd8csn282"; depends=[]; }; + yeastCC = derive2 { name="yeastCC"; version="1.18.0"; sha256="1qm0knin24bwpjsi4g9s6vdfydrjqvv19a2kjx1k51l2j46g0rni"; depends=[Biobase]; }; + yeastExpData = derive2 { name="yeastExpData"; version="0.24.0"; sha256="19v901c67kp8kfb6i2hv8mczf9kcy0pvr8y4w5brjp4lj6djcvid"; depends=[graph]; }; + yeastGSData = derive2 { name="yeastGSData"; version="0.16.0"; sha256="19c4293lzrw8d8az1bzfw5ipxyrzgh8kxi3km82nqzfcnxlq0b89"; depends=[]; }; + yeastNagalakshmi = derive2 { name="yeastNagalakshmi"; version="1.14.0"; sha256="0f7amg423236scpzxqi2jy2w4ppa0zqwn9m4mqjksk2klig9nx3g"; depends=[]; }; + yeastRNASeq = derive2 { name="yeastRNASeq"; version="0.16.0"; sha256="05pi5s91wivlc1nfnsnzgx8kdibi7a3k5dgqh0a0x98wiqynin41"; depends=[]; }; + yri1kgv = derive2 { name="yri1kgv"; version="0.20.0"; sha256="0hl53rl5yhmd3yxdjd2q0wj8mlcgdckiln0dym83b1249lnhwp9z"; depends=[Biobase GGBase]; }; + yriMulti = derive2 { name="yriMulti"; version="0.8.0"; sha256="0b48phy3jndplmi9yxbd0i5bn7jqf6fpb7qlqxvzibm1q50l9yx3"; depends=[dsQTL GenomeInfoDb GenomicFiles GenomicRanges geuvPack gQTLBase Homo_sapiens MultiAssayExperiment SummarizedExperiment VariantAnnotation]; }; + zebrafishRNASeq = derive2 { name="zebrafishRNASeq"; version="0.112.0"; sha256="1zpn3d4xmzq18hji93g5br1snw0d9wmvpjmbxnmiaqwr8mrx5zbn"; depends=[]; }; } diff --git a/pkgs/development/r-modules/bioc-packages.nix b/pkgs/development/r-modules/bioc-packages.nix index 070ff5e96ade..06f1d81d8a98 100644 --- a/pkgs/development/r-modules/bioc-packages.nix +++ b/pkgs/development/r-modules/bioc-packages.nix @@ -4,1300 +4,1483 @@ # Rscript generate-r-packages.R bioc >new && mv new bioc-packages.nix { self, derive }: -let derive2 = derive { rVersion = "3.4"; }; +let derive2 = derive { biocVersion = "3.6"; }; in with self; { - ABAEnrichment = derive2 { name="ABAEnrichment"; version="1.4.0"; sha256="1skhxyvyfgld2abiw8cl8wkqrq80jm2pm4p6l297v25cbsjmk3lz"; depends=[ABAData gplots Rcpp]; }; - ABSSeq = derive2 { name="ABSSeq"; version="1.20.4"; sha256="032j430z787j1jrm0c40nn6m33vbjyngiz9ln1jx2z222ybcxrd6"; depends=[limma locfit]; }; - ABarray = derive2 { name="ABarray"; version="1.42.0"; sha256="17vmy7419jdbrkzjll2ck2qvw3wdbba2cdazvji5zrflg9938hmj"; depends=[Biobase multtest]; }; - ACME = derive2 { name="ACME"; version="2.30.0"; sha256="1hhqdnv4dkck47yvp17y3b741d63dxnlhbmkylz5bdab2swffz4m"; depends=[Biobase BiocGenerics]; }; - ADaCGH2 = derive2 { name="ADaCGH2"; version="2.14.0"; sha256="0lvj93gy2x7c6fh2lv8mr17aglk97cmp8s7nwrhysxizbhpzf6mn"; depends=[aCGH bit cluster DNAcopy ff ffbase GLAD snapCGH tilingArray waveslim]; }; - AGDEX = derive2 { name="AGDEX"; version="1.22.0"; sha256="06zcc8zc5dz310wi1rp75f6015lf97dwaqgqrbxim2akrfrnhyzb"; depends=[Biobase GSEABase]; }; - AIMS = derive2 { name="AIMS"; version="1.6.0"; sha256="1z62cw3f803vl4mymaxaa0vkvrlsmc79idqcq92qw9iznpdl2jam"; depends=[Biobase e1071]; }; - ALDEx2 = derive2 { name="ALDEx2"; version="1.6.0"; sha256="1iiympsbj234nh7pdpgw6wiadj356i925j6in5d14jcqkq12jwpv"; depends=[BiocParallel GenomicRanges IRanges S4Vectors SummarizedExperiment]; }; - AMOUNTAIN = derive2 { name="AMOUNTAIN"; version="1.0.0"; sha256="0fh7086cdhpp05nwwj6bxwrzi9m6wkzirlb905c3g46afd9wxjrp"; depends=[]; }; - ARRmNormalization = derive2 { name="ARRmNormalization"; version="1.14.0"; sha256="1ikfh4sqzclhva92wz9xhlf835sw9isa6jflnsjwqilg5kivy9bp"; depends=[ARRmData]; }; - ASAFE = derive2 { name="ASAFE"; version="1.0.0"; sha256="0jcjd5gh8j9iwq1b97jw614cz69z2s2fxv1prqkx3alibsf8jr2x"; depends=[]; }; - ASEB = derive2 { name="ASEB"; version="1.18.0"; sha256="09kppm2lhhhd0kfy274xx6p387fxh7rfa3g4ajncnq6bspz8hvia"; depends=[]; }; - ASGSCA = derive2 { name="ASGSCA"; version="1.8.0"; sha256="0w8lwaaj51fh3ibrdcba74x1nfar4m30dz2rii63lk0ah2xb9amy"; depends=[MASS Matrix]; }; - ASSET = derive2 { name="ASSET"; version="1.12.0"; sha256="0vpyi5vpyys597ma8ig18hm1x2f86fwzd35wq5h68glnm3jm3vds"; depends=[MASS msm mvtnorm rmeta tmvnsim]; }; - ASSIGN = derive2 { name="ASSIGN"; version="1.10.0"; sha256="0ks2k8r650j95wd0s7bvxl4d8bgx6dzzb4bpqc68p6bmnx80vkqv"; depends=[gplots msm Rlab]; }; - ASpli = derive2 { name="ASpli"; version="1.0.0"; sha256="0cyq81f2ll9ygvq71p3mlmnvs8pm1582pldz1amlwwwdng7c4v36"; depends=[AnnotationDbi BiocGenerics DESeq2 DEXSeq edgeR GenomicAlignments GenomicFeatures GenomicRanges Gviz IRanges S4Vectors]; }; - AffyCompatible = derive2 { name="AffyCompatible"; version="1.34.0"; sha256="1275r14pgj33zq275yp9xqvmxl2nqi2cgylbyjy8i9xvbg4f4sfg"; depends=[Biostrings RCurl XML]; }; - AffyExpress = derive2 { name="AffyExpress"; version="1.40.0"; sha256="0ahj4fm2wdcza4w9m12vvfmzgl2f71xkhwf8mrwm69fp9n1s27lx"; depends=[affy limma]; }; - AffyRNADegradation = derive2 { name="AffyRNADegradation"; version="1.20.0"; sha256="03rsp23nzvzyswxziwf07x0q5w2f7lhsjpz1biz2pzv64g6xnkwi"; depends=[affy]; }; - AgiMicroRna = derive2 { name="AgiMicroRna"; version="2.24.0"; sha256="0jd78lh02kwxqll5qwnfkwrgfrm5scdc6p703r0vd8gl3cz8wdws"; depends=[affy affycoretools Biobase limma preprocessCore]; }; - AllelicImbalance = derive2 { name="AllelicImbalance"; version="1.12.0"; sha256="0a4bmv7fpd134vdixlwxszlz7lx8xab8122m6p92q6gpla5fb6hk"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gridExtra Gviz IRanges lattice latticeExtra Rsamtools S4Vectors seqinr SummarizedExperiment VariantAnnotation]; }; - AnalysisPageServer = derive2 { name="AnalysisPageServer"; version="1.8.1"; sha256="16x28f7lc5rn73m8l5z3jigkld5yf12pf5hv0mrq9l6fln1i002x"; depends=[Biobase graph log4r rjson]; }; - Anaquin = derive2 { name="Anaquin"; version="1.0.0"; sha256="1fcbxzl4jwcbkgn4v5x4g901fpvlij5hv5n0jfvhxi8wdwqi0xq6"; depends=[ggplot2 knitr locfit plyr qvalue ROCR]; }; - AneuFinder = derive2 { name="AneuFinder"; version="1.2.1"; sha256="1yicsbfj72qbzz03pn1wndmkmsa9i97a78cblhl3vhqgkfff8dx5"; depends=[AneuFinderData bamsignals BiocGenerics Biostrings cowplot DNAcopy doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggdendro ggplot2 ggrepel IRanges mclust ReorderCluster reshape2 Rsamtools S4Vectors]; }; - AnnotationDbi = derive2 { name="AnnotationDbi"; version="1.36.2"; sha256="0574lmyisn3nv9aicz9x3iivx990da4q2j4i0f1jz0mpj9v3vc2w"; depends=[Biobase BiocGenerics DBI IRanges RSQLite S4Vectors]; }; - AnnotationForge = derive2 { name="AnnotationForge"; version="1.16.1"; sha256="0l1g9hy88sh5g567svyfd8pnjvkyklkn6a3gjn8zalvh62qqjjq1"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl RSQLite S4Vectors XML]; }; - AnnotationFuncs = derive2 { name="AnnotationFuncs"; version="1.24.0"; sha256="1x8rwldmwiri0jk1ypc47bgwdq8nzbbxji9pphgs69g09dijsd0f"; depends=[AnnotationDbi DBI]; }; - AnnotationHub = derive2 { name="AnnotationHub"; version="2.6.5"; sha256="0ff2by5bw5ywxwasiq7z5zc5w7wwwjsvwkj26mjv35zvy7d33kd2"; depends=[AnnotationDbi BiocGenerics BiocInstaller httr interactiveDisplayBase RSQLite S4Vectors yaml]; }; - AnnotationHubData = derive2 { name="AnnotationHubData"; version="1.4.1"; sha256="16v6pqdicjsc9vr4mpjrczffw2dzfkzqp302n0c7m8q2hyw869yl"; depends=[AnnotationDbi AnnotationForge AnnotationHub Biobase BiocGenerics BiocInstaller Biostrings curl DBI futile_logger GenomeInfoDb GenomicFeatures GenomicRanges GEOquery httr IRanges jsonlite OrganismDbi rBiopaxParser Rsamtools RSQLite rtracklayer S4Vectors XML xml2]; }; - ArrayExpress = derive2 { name="ArrayExpress"; version="1.34.0"; sha256="00142sbwbxgwqqhizhjkv5c6jc3575r4s3wwmq4jl6xhlb6nmab6"; depends=[Biobase limma oligo XML]; }; - ArrayExpressHTS = derive2 { name="ArrayExpressHTS"; version="1.24.0"; sha256="13y4z76sf05ix9ca0pw058q49y5q1z9yisngwjwkmigcz2bwp6z2"; depends=[Biobase BiocGenerics biomaRt Biostrings bitops DESeq edgeR GenomicRanges Hmisc IRanges R2HTML RColorBrewer rJava Rsamtools sampling sendmailR ShortRead snow svMisc XML]; }; - ArrayTV = derive2 { name="ArrayTV"; version="1.12.0"; sha256="10dxj9p02lbh80s17yg3blkx1jha8a962949g733k4p6l25av4jx"; depends=[DNAcopy foreach oligoClasses S4Vectors]; }; - ArrayTools = derive2 { name="ArrayTools"; version="1.34.0"; sha256="02sbknh03k84ylbmmbby8f96dbnwyi2i7hl1p8akf7idg3skinma"; depends=[affy Biobase limma xtable]; }; - AtlasRDF = derive2 { name="AtlasRDF"; version="1.10.0"; sha256="1ar3ggivwc5nx22kyqapv1sb0ra91nq78c989prx5bli3cxfrkxg"; depends=[hash SPARQL]; }; - BAC = derive2 { name="BAC"; version="1.34.0"; sha256="0j7l177nc5c1imib2y1lnnza2b5824rjb10plbpa5knn15kql1l9"; depends=[]; }; - BADER = derive2 { name="BADER"; version="1.12.0"; sha256="0q62cyjqqb5v5cnbn9nm3mlfifz140wk6r27d75dshji4arwc60y"; depends=[]; }; - BAGS = derive2 { name="BAGS"; version="2.14.0"; sha256="0ajjbz3g09qwdl57ab2yhrdvmbw1d0hfcncglpsbf98pb6kda1br"; depends=[Biobase breastCancerVDX]; }; - BBCAnalyzer = derive2 { name="BBCAnalyzer"; version="1.4.0"; sha256="1q6msd8l3v10swx4cbc71ggihnw9p3pj87v2n5mgdzpc1nngygib"; depends=[Biostrings GenomicRanges IRanges Rsamtools SummarizedExperiment VariantAnnotation]; }; - BCRANK = derive2 { name="BCRANK"; version="1.36.0"; sha256="0jx6mp6ca4kwpyv341n485hlyzgqayynfrx6vl18dp6f0zkarkym"; depends=[Biostrings]; }; - BEAT = derive2 { name="BEAT"; version="1.12.0"; sha256="03wcm4ga5vsf7iqih7p0sw39ipjaygvhx2x153fnqfhg34a4k67z"; depends=[Biostrings BSgenome GenomicRanges ShortRead]; }; - BEclear = derive2 { name="BEclear"; version="1.6.0"; sha256="1z04ylm5821s7rgrv0bgx5mmy4f09d3a5n4r0mz82lnin7i8swab"; depends=[Matrix snowfall]; }; - BGmix = derive2 { name="BGmix"; version="1.34.0"; sha256="1zkylanfd9m35hswvyykjqz1rb84fhn51q18g32ilpk4yd78aqj2"; depends=[KernSmooth]; }; - BHC = derive2 { name="BHC"; version="1.26.0"; sha256="0xawsqh3drpw14c9a3sacd0rmk93p6gn2yfmqlf91a41sbpj0hpc"; depends=[]; }; - BPRMeth = derive2 { name="BPRMeth"; version="1.0.0"; sha256="0rn4q12bjy5k6g9wkghrxivfzw32qwc6sh4b2b6gaxqsq4rqbnmj"; depends=[assertthat data_table doParallel e1071 earth foreach GenomicRanges IRanges MASS randomForest S4Vectors]; }; - BRAIN = derive2 { name="BRAIN"; version="1.20.0"; sha256="1nj78v1z98mj1n6kyw4fgradn4yqbyd58db15xwlk8d23gs902wq"; depends=[Biostrings lattice PolynomF]; }; - BSgenome = derive2 { name="BSgenome"; version="1.42.0"; sha256="0hxwc02h5mzhkrk60d1jmlsfjf0ai9jxdc0128kj1sg4r2k1q94y"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools rtracklayer S4Vectors XVector]; }; - BUS = derive2 { name="BUS"; version="1.30.0"; sha256="144x8zl983vis1k0nba5j2i6pywrczmq2cqdg3bd1w1z9n69643k"; depends=[infotheo minet]; }; - BaalChIP = derive2 { name="BaalChIP"; version="1.0.0"; sha256="0dy3096078gfy9awyagqnbv63ib8bbgh36jf9zvfhilrz9d31xl5"; depends=[coda doBy doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges reshape2 Rsamtools scales]; }; - BadRegionFinder = derive2 { name="BadRegionFinder"; version="1.2.0"; sha256="09q1bqgz6amraslcdihjz81q7gndn158vp6wpzb1ky9fdd6akd0a"; depends=[biomaRt GenomicRanges Rsamtools S4Vectors VariantAnnotation]; }; - BaseSpaceR = derive2 { name="BaseSpaceR"; version="1.18.0"; sha256="03jpwdngyjs18pzkp17fdyy5vq6h0ccqw942a7nd60dsf27mw3pf"; depends=[RCurl RJSONIO]; }; - Basic4Cseq = derive2 { name="Basic4Cseq"; version="1.10.0"; sha256="0cgb4qn3gg7cgp81cblg9qkim729bjvygi7wlxsnsriqfjljsb5s"; depends=[Biostrings BSgenome_Ecoli_NCBI_20080805 caTools GenomicAlignments GenomicRanges RCircos]; }; - BasicSTARRseq = derive2 { name="BasicSTARRseq"; version="1.2.0"; sha256="0z7z6gnsczdb4x9277i0fyf5306gkn94j1j2i5aw1j990hrnb619"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges S4Vectors]; }; - BatchQC = derive2 { name="BatchQC"; version="1.2.1"; sha256="0gdxbn74zrbpgg0y9w0n8mbibh0f320ghgyw32ya1agc8maqkfzm"; depends=[corpcor d3heatmap ggvis gplots knitr limma matrixStats MCMCpack moments pander reshape2 rmarkdown shiny sva]; }; - BayesKnockdown = derive2 { name="BayesKnockdown"; version="1.0.0"; sha256="07zmkihvakhqxc6v6hh95d3wkg32vrvag1fbx9qxfmqnnicsrnin"; depends=[Biobase]; }; - BayesPeak = derive2 { name="BayesPeak"; version="1.26.0"; sha256="1hk31ic0r7zbvfz04h1ginkkhzbz85wdlsmym1aqbiz4x53j97wj"; depends=[IRanges]; }; - BeadDataPackR = derive2 { name="BeadDataPackR"; version="1.26.0"; sha256="0ms2wa4h81j4q6bwak217q8nkrkmj5zjm33i3gkifbzav2s1k5vf"; depends=[]; }; - BgeeDB = derive2 { name="BgeeDB"; version="2.0.0"; sha256="11az0sqnjrpfw3pnf0aqgz4kqd8gd1976s9zfyl10gyrfj7h9n49"; depends=[Biobase data_table digest dplyr graph RCurl tidyr topGO]; }; - BiGGR = derive2 { name="BiGGR"; version="1.10.0"; sha256="1h2ilx761cy3f4vd52kz4vyq74khln5jiwhllg3w4vs4kczvs32k"; depends=[hyperdraw hypergraph LIM limSolve rsbml stringr]; }; - BiRewire = derive2 { name="BiRewire"; version="3.6.0"; sha256="138q86h188nnwb4f0q1xw07n0v44cgmfzh5j9xvbkcp522lj0n92"; depends=[igraph Matrix slam tsne]; }; - BiSeq = derive2 { name="BiSeq"; version="1.14.0"; sha256="1bdgg8mb269hipp0n8bphdgrslzmc8ykcdx848vcgppgfb0dab7a"; depends=[betareg Biobase BiocGenerics Formula GenomeInfoDb GenomicRanges globaltest IRanges lokern rtracklayer S4Vectors SummarizedExperiment]; }; - BicARE = derive2 { name="BicARE"; version="1.32.0"; sha256="0mkdb2ijr8lb1j08nzd3vwr63vjlpfs739fwk5ay586a99n4qi0z"; depends=[Biobase GSEABase multtest]; }; - BioMVCClass = derive2 { name="BioMVCClass"; version="1.42.0"; sha256="1zd7s997dyhl85b99nzqy5a2ljdz7gh55l02y3qadgbfazfrfbfl"; depends=[Biobase graph MVCClass Rgraphviz]; }; - BioNet = derive2 { name="BioNet"; version="1.34.0"; sha256="1vjnlr7gasklb9dshz580bc8z8rkd98093rf0049vqf4z7d65m3j"; depends=[AnnotationDbi Biobase graph igraph RBGL]; }; - BioQC = derive2 { name="BioQC"; version="1.2.0"; sha256="0cjh945vjcgn8lxi3gd13m96vrp01pz96mjn0apcp7xbf2rcfmmx"; depends=[Biobase Rcpp]; }; - BioSeqClass = derive2 { name="BioSeqClass"; version="1.32.0"; sha256="1m0arhpckd2g48mwfm56av4fkgs6mcmwygxyci0jfh9hl78mp155"; depends=[Biobase Biostrings class e1071 foreign ipred klaR nnet party randomForest rpart scatterplot3d tree]; }; - Biobase = derive2 { name="Biobase"; version="2.34.0"; sha256="0js9j9wqls8f571ifl9ylllbb9a9hwf7b7drf2grwb1fl31ldazl"; depends=[BiocGenerics]; }; - BiocCaseStudies = derive2 { name="BiocCaseStudies"; version="1.36.0"; sha256="1qgf7hii9zhw8awqs7j89k35y34w45xb9k4sa8csd76h3y7av3q0"; depends=[Biobase]; }; - BiocCheck = derive2 { name="BiocCheck"; version="1.10.1"; sha256="197kpiycyl3qawm6801fxyxj81d2g57a00qxaqprapsf1d140l52"; depends=[BiocInstaller biocViews codetools graph httr optparse]; }; - BiocGenerics = derive2 { name="BiocGenerics"; version="0.20.0"; sha256="06szdz7dfs1iyv5zdl4fjzad18nnf1zf3wvglc6c6yd9mrqlf7vk"; depends=[]; }; - BiocInstaller = derive2 { name="BiocInstaller"; version="1.24.0"; sha256="0y1y5wmy6lzjqx3hdg15n91d417ccjj8dbvdkhmp99bs5aijwcpn"; depends=[]; }; - BiocParallel = derive2 { name="BiocParallel"; version="1.8.2"; sha256="18zpa0vl375n9pvxsgbid1k96m17nqqgv1g1sfnlmm7kj34jxg6v"; depends=[futile_logger snow]; }; - BiocStyle = derive2 { name="BiocStyle"; version="2.2.1"; sha256="0sl99xw940ixrm6v24lgaw3ljh56g59a6rdz7g160hx84z9f8n2n"; depends=[]; }; - BiocWorkflowTools = derive2 { name="BiocWorkflowTools"; version="1.0.0"; sha256="0asia6f2ff80g8a2w0fckkqhcydkj4ry67c7wlxsz0xzllp14gxl"; depends=[httr knitr rmarkdown stringr]; }; - Biostrings = derive2 { name="Biostrings"; version="2.42.1"; sha256="0vqgd9i6y3wj4zviqwgvwgd4qj6033fg01rmx1cw9bw5i8ans42d"; depends=[BiocGenerics IRanges S4Vectors XVector]; }; - BitSeq = derive2 { name="BitSeq"; version="1.18.0"; sha256="0kv2kk1flm6vbs7s2d6kya1jg8hajrxdg5ndihrsybaas5fby8mb"; depends=[IRanges Rsamtools S4Vectors zlibbioc]; }; - BrainStars = derive2 { name="BrainStars"; version="1.18.0"; sha256="0q0jx30baf2hnz4mplqj6jhl7mj5hncgb00cj1d6yijv9c9iiay7"; depends=[Biobase RCurl RJSONIO]; }; - BridgeDbR = derive2 { name="BridgeDbR"; version="1.8.0"; sha256="049a5bdjxp30jc5zgswk0bsyfvri58g4zrbkw258kwgsmk44l6f4"; depends=[RCurl rJava]; }; - BrowserViz = derive2 { name="BrowserViz"; version="1.6.0"; sha256="06a7sg26b0lwla9vzq9vnggvbhnnw5xh07r7yr258d5030nabpy3"; depends=[BiocGenerics httpuv jsonlite]; }; - BrowserVizDemo = derive2 { name="BrowserVizDemo"; version="1.6.0"; sha256="0v1l13i6xf8605xrmgfj0pi0r4w15jpzvz4inhpnm66rn0qv2r5q"; depends=[BiocGenerics BrowserViz httpuv jsonlite Rcpp]; }; - BubbleTree = derive2 { name="BubbleTree"; version="2.4.0"; sha256="16sy8yfbjr1shbd63g9354mzxsisqp4d9nfi6hxhj5c2r35x6bga"; depends=[Biobase BiocGenerics BiocStyle biovizBase dplyr e1071 GenomicRanges ggplot2 gridExtra gtable gtools IRanges limma magrittr plyr rainbow RColorBrewer WriteXLS]; }; - BufferedMatrix = derive2 { name="BufferedMatrix"; version="1.38.0"; sha256="04l2dqnf2akq4fhy63sywnmrcddz0r7da3gbd2zgp9fyn6m5ayv0"; depends=[]; }; - BufferedMatrixMethods = derive2 { name="BufferedMatrixMethods"; version="1.38.0"; sha256="0m7pwiyrk482g73aknmhpp09vc4yb5s3jb8bp3y9d494hdy7mijl"; depends=[BufferedMatrix]; }; - CAFE = derive2 { name="CAFE"; version="1.10.0"; sha256="0gw5c94fr1kzckai6bgyc5dkgizqir3k8zcc6mdpl5d07hwahsip"; depends=[affy annotate Biobase biovizBase GenomicRanges ggbio ggplot2 gridExtra IRanges]; }; - CAGEr = derive2 { name="CAGEr"; version="1.16.0"; sha256="1bbbj2bqc2xd5akmgi30w0h0rfn1n5sv626dz916alhjzhiqx52m"; depends=[beanplot BSgenome data_table GenomicRanges IRanges Rsamtools rtracklayer som VGAM]; }; - CALIB = derive2 { name="CALIB"; version="1.40.0"; sha256="0r0dz6vg3sx4bxajh6c8gc12wgnaahnz3yah82jsws1wzplqhkvi"; depends=[limma]; }; - CAMERA = derive2 { name="CAMERA"; version="1.30.0"; sha256="074ln7d0f5gqsk9cxsckmklbx8grzh9kqjlf8zcz6j7ypnzkhy57"; depends=[Biobase graph Hmisc igraph RBGL xcms]; }; - CAnD = derive2 { name="CAnD"; version="1.6.0"; sha256="14nq061i69hk8yrkiq35lk7nk58klpl7lmkjzfdd8789h87218b2"; depends=[ggplot2 reshape]; }; - CCPROMISE = derive2 { name="CCPROMISE"; version="1.0.0"; sha256="0cx58i42dypx6sqyrmbf4gw2c2213cgjbijkq2fxf9ah8fm4ss3p"; depends=[Biobase CCP GSEABase PROMISE]; }; - CFAssay = derive2 { name="CFAssay"; version="1.8.0"; sha256="0p91q4z8kip0pqn45kspczhffv9f6mwn1p07q2bwl5fdcbs2xp5p"; depends=[]; }; - CGEN = derive2 { name="CGEN"; version="3.10.0"; sha256="189bhjzgcag4n216h0jnq994y439nd052yalx7ll5q7nazhw5j8w"; depends=[mvtnorm survival]; }; - CGHbase = derive2 { name="CGHbase"; version="1.34.0"; sha256="1pb1paby9n9map71jk971qfpni2m23hcwrssqqjb7byjc9flnmf5"; depends=[Biobase marray]; }; - CGHcall = derive2 { name="CGHcall"; version="2.36.0"; sha256="0wnyslj7yn0yc57q60w2y644lmvvvih6rzm55rrad34lz2h39bsz"; depends=[Biobase CGHbase DNAcopy impute snowfall]; }; - CGHnormaliter = derive2 { name="CGHnormaliter"; version="1.28.0"; sha256="1bv8vivl9b0c1dp7ka9dh3gvk1z4zpcirifh7yq0p9g9yr22k0vb"; depends=[Biobase CGHbase CGHcall]; }; - CGHregions = derive2 { name="CGHregions"; version="1.32.0"; sha256="1cc2vz6k5lasvzj2dh8xm26j7zvvwwx8791pqhz6q2fisxq5vz1c"; depends=[Biobase CGHbase]; }; - CHRONOS = derive2 { name="CHRONOS"; version="1.2.1"; sha256="0hzj01dw4xwivy0ikyh55i2zkf61g03m6rm6xfdhc7a49y6fzxpr"; depends=[biomaRt circlize doParallel foreach graph openxlsx RBGL RCurl XML]; }; - CINdex = derive2 { name="CINdex"; version="1.2.0"; sha256="096qiz86rxfhcrjs0pf3mp5zqgi3j7i4agbw53ym5kwzg486y2r2"; depends=[bitops dplyr GenomeInfoDb GenomicRanges gplots gridExtra IRanges png S4Vectors som stringr]; }; - CMA = derive2 { name="CMA"; version="1.32.0"; sha256="0706k4xjakyid6mkca6z6r24kbsnkvw7qzzadqkm45sy11z0w5l8"; depends=[Biobase]; }; - CNAnorm = derive2 { name="CNAnorm"; version="1.20.0"; sha256="0dja320m9yiaj0kp9gmygpbqffnjdpi476wwcs2gwd6yixsldl6b"; depends=[DNAcopy]; }; - CNEr = derive2 { name="CNEr"; version="1.10.2"; sha256="12z2iza0mgw9yrpnlv7447mcsxn8h183712q66f1j4a779mhn5ii"; depends=[annotate BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 GO_db IRanges KEGGREST poweRlaw R_utils readr reshape2 RSQLite rtracklayer S4Vectors XVector]; }; - CNORdt = derive2 { name="CNORdt"; version="1.16.0"; sha256="086ynj0nb6799qxgj7zys9gzxf4lvhacsqxr2qzl2hw4y13gxxkp"; depends=[abind CellNOptR]; }; - CNORfeeder = derive2 { name="CNORfeeder"; version="1.14.0"; sha256="19x8xxra4n5ys8wjqwj49qs3lg5jq9y00c36avr7cckxi9kyqqhc"; depends=[CellNOptR graph]; }; - CNORfuzzy = derive2 { name="CNORfuzzy"; version="1.16.0"; sha256="03k246x3yi0c3bw8h0642767p6zbgx8d0ahvnv29lcrb7wp9qsi3"; depends=[CellNOptR nloptr]; }; - CNORode = derive2 { name="CNORode"; version="1.16.0"; sha256="1zsnig3r8yqa06nfxbd8czxjk72h5z7h0vd85cqkb181bwagl0r3"; depends=[CellNOptR genalg]; }; - CNPBayes = derive2 { name="CNPBayes"; version="1.4.0"; sha256="1ly0mh6k7x443i25g0j716aflc5q2rld0fqnyr86k1x06rh0ky8q"; depends=[BiocGenerics coda combinat GenomeInfoDb GenomicRanges gtools IRanges matrixStats RColorBrewer Rcpp S4Vectors SummarizedExperiment]; }; - CNTools = derive2 { name="CNTools"; version="1.30.0"; sha256="0wcny74g377741as9dw87n4vf6yi8yvxhxbf87x0y4zkf88aimcz"; depends=[genefilter]; }; - CNVPanelizer = derive2 { name="CNVPanelizer"; version="1.4.0"; sha256="00xgwf62cs9l6pnvbp33b442q1mgaibac5fw4n2qsypdfb2p1xn3"; depends=[exomeCopy foreach GenomicRanges ggplot2 IRanges NOISeq openxlsx plyr Rsamtools S4Vectors]; }; - CNVrd2 = derive2 { name="CNVrd2"; version="1.12.0"; sha256="1msjvq3200y637ybh2yb5g1c2z0aqk1bwjvrndrg36vlg7342b6y"; depends=[DNAcopy ggplot2 gridExtra IRanges rjags Rsamtools VariantAnnotation]; }; - CNVtools = derive2 { name="CNVtools"; version="1.68.0"; sha256="1lx2jhwfwya2hm8v9dkqkjhfbfp008k2k75r63wpph8yfxhyvvmz"; depends=[survival]; }; - CODEX = derive2 { name="CODEX"; version="1.6.0"; sha256="077cbv8n6mr8ksapxj2b837ms68kyzgjlk499c69q3dji456bgfw"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb IRanges Rsamtools S4Vectors]; }; - COHCAP = derive2 { name="COHCAP"; version="1.16.0"; sha256="14smbyviii5ghac3rhkrz87vhx6nxgv3n54k3rrzsdbrw8n0i773"; depends=[COHCAPanno gplots RColorBrewer WriteXLS]; }; - COMPASS = derive2 { name="COMPASS"; version="1.12.0"; sha256="1cmqqcsv32ixdmm9qybvafjca6lqzc652hp4jn9vy62ffb81r8i8"; depends=[abind clue data_table knitr pdist plyr RColorBrewer Rcpp scales]; }; - CONFESS = derive2 { name="CONFESS"; version="1.2.2"; sha256="1zw3sl5vzn6j8qppz39s2l11f9n2p5yzr4b17qgar6p41f83xffa"; depends=[changepoint cluster contrast EBImage ecp flexmix flowClust flowCore flowMeans flowMerge flowPeaks foreach ggplot2 limma MASS moments outliers plotrix raster readbitmap reshape2 SamSPECTRAL waveslim wavethresh zoo]; }; - CORREP = derive2 { name="CORREP"; version="1.40.0"; sha256="1wd8qq11xdyis0acnzlml10m0z8fazzhmvxxqa21h2wpq0yz9m19"; depends=[e1071]; }; - COSNet = derive2 { name="COSNet"; version="1.8.0"; sha256="07s72x0dbsnq340v1akl4jp8m63nnxck2nvivz12cvbq8hbhz6hf"; depends=[]; }; - CRISPRseek = derive2 { name="CRISPRseek"; version="1.14.1"; sha256="0l3blmszil8zr03wg9pwl59lkyxbn1pa3pz967nlbwffcv2lqfa0"; depends=[BiocGenerics BiocParallel Biostrings BSgenome data_table hash IRanges S4Vectors seqinr]; }; - CRImage = derive2 { name="CRImage"; version="1.22.0"; sha256="0km82x446b1r9b27z1cx65nd9lm8ppxkarzqwqs426hj59wpzxhf"; depends=[aCGH DNAcopy e1071 EBImage foreach MASS sgeostat]; }; - CSAR = derive2 { name="CSAR"; version="1.26.0"; sha256="15w6mmwd5pqb144x3dyhi6x2ni00n0ak94lfrw317rajq733zr0p"; depends=[GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; - CSSP = derive2 { name="CSSP"; version="1.12.0"; sha256="03gpl3w7iw79gcni4xchvbkrsp7v6i8zy6aqws54za4wimwqvsnf"; depends=[]; }; - CVE = derive2 { name="CVE"; version="1.0.0"; sha256="0xmy5mdw43db9d8pd3k6d73005hba72df24fsmgp9dv5sy9rg6p2"; depends=[ape ConsensusClusterPlus ggplot2 gplots jsonlite plyr RColorBrewer shiny WGCNA]; }; - CancerInSilico = derive2 { name="CancerInSilico"; version="1.0.0"; sha256="17jmyrcgs698g74hxp9mif7g4s175qdrfy5h1zz72fwcssmblh74"; depends=[BH Rcpp testthat]; }; - CancerMutationAnalysis = derive2 { name="CancerMutationAnalysis"; version="1.16.0"; sha256="1wzbrlw5zf0pmm5m41wqf73wlsidb11l7l9llrmidbg860j0jjs0"; depends=[AnnotationDbi limma qvalue]; }; - CancerSubtypes = derive2 { name="CancerSubtypes"; version="1.0.0"; sha256="1vja80lj16icp6jblw62b24daj7izgk9wbhbwprlbgcjvkppxfik"; depends=[cluster ConsensusClusterPlus iCluster impute limma NMF sigclust SNFtool survival]; }; - Cardinal = derive2 { name="Cardinal"; version="1.6.0"; sha256="1fwni0dwn1syz5j0961fpmnmifqb20hd23ysazfi3xvdq7pf1lw7"; depends=[Biobase BiocGenerics irlba lattice ProtGenerics signal sp]; }; - Category = derive2 { name="Category"; version="2.40.0"; sha256="16ncwz7b4y48k0p3fvbrbmvf7nfz63li9ysgcl8kp9kl4hg7llng"; depends=[annotate AnnotationDbi Biobase BiocGenerics genefilter graph GSEABase Matrix RBGL RSQLite]; }; - CausalR = derive2 { name="CausalR"; version="1.6.0"; sha256="0l0021qslqj0xvrkg1lpmfnwdvi03yc7y2k62iz83s7k77z0wj6c"; depends=[igraph]; }; - CellMapper = derive2 { name="CellMapper"; version="1.0.0"; sha256="1ixii9ppg7jhwvazzzjy3dq01x35yc3k81j698988dfrdls0plcv"; depends=[S4Vectors]; }; - CellNOptR = derive2 { name="CellNOptR"; version="1.20.0"; sha256="1awz7k09rx03f8dq5g9mmnlizpx6232vvc03ycah3r1wwzgfzlhd"; depends=[ggplot2 graph hash RBGL RCurl Rgraphviz XML]; }; - CexoR = derive2 { name="CexoR"; version="1.12.0"; sha256="110c7p0y3l7b491bvr78n5z8f4gmfgfjndbd8pnhn0k7abb9bvs9"; depends=[genomation GenomeInfoDb GenomicRanges idr IRanges RColorBrewer Rsamtools rtracklayer S4Vectors]; }; - ChAMP = derive2 { name="ChAMP"; version="2.6.4"; sha256="1f8ngnzp6yq4x746vid72ind2bi7l1wdfnipyj2wn0gsh2jpxa7c"; depends=[bumphunter ChAMPdata dendextend DMRcate DNAcopy doParallel FEM GenomicRanges goseq Illumina450ProbeVariants_db IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICmanifest impute isva limma marray matrixStats minfi plotly plyr preprocessCore quadprog qvalue RColorBrewer RefFreeEWAS RPMM shiny shinythemes sva wateRmelon]; }; - ChIPComp = derive2 { name="ChIPComp"; version="1.4.0"; sha256="0wr9qrw9mnjl28fw764vhjb2shif6fl3z0hbwkhrfiz1974rdw0v"; depends=[BiocGenerics BSgenome_Hsapiens_UCSC_hg19 BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicRanges IRanges limma Rsamtools rtracklayer S4Vectors]; }; - ChIPQC = derive2 { name="ChIPQC"; version="1.10.3"; sha256="1nabghyndp4bky6msb4k6gcxpgysz7rir545d5afrfi4gbk1rpfi"; depends=[Biobase BiocGenerics BiocParallel chipseq DiffBind GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gtools IRanges Nozzle_R1 reshape2 Rsamtools S4Vectors TxDb_Celegans_UCSC_ce6_ensGene TxDb_Dmelanogaster_UCSC_dm3_ensGene TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene TxDb_Rnorvegicus_UCSC_rn4_ensGene]; }; - ChIPXpress = derive2 { name="ChIPXpress"; version="1.16.0"; sha256="19lx482jhh4h97nic57lk198a0x1xc51cnx79l9h6r9r86ncxl0w"; depends=[affy biganalytics bigmemory Biobase ChIPXpressData frma GEOquery]; }; - ChIPpeakAnno = derive2 { name="ChIPpeakAnno"; version="3.8.9"; sha256="1wykx52xqnz9pcxgfzf5i0ckrw41jg0piwynx1v1ldjxajbdh904"; depends=[AnnotationDbi Biobase BiocGenerics BiocInstaller biomaRt Biostrings BSgenome DBI ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GO_db graph idr IRanges limma matrixStats multtest RBGL regioneR Rsamtools S4Vectors seqinr SummarizedExperiment VennDiagram]; }; - ChIPseeker = derive2 { name="ChIPseeker"; version="1.10.3"; sha256="00bv8i44c33ak2v6wzzk7s963wdhzb3c03ch2v8bkmnnb99sk0za"; depends=[AnnotationDbi BiocGenerics boot DOSE dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gplots gridBase gtools IRanges magrittr plotrix RColorBrewer rtracklayer S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene UpSetR]; }; - ChIPseqR = derive2 { name="ChIPseqR"; version="1.28.0"; sha256="0bv5anp4p220vh53khaqggwclp34k2402mfcj28wv9cfl7xhw4g3"; depends=[BiocGenerics Biostrings fBasics GenomicRanges HilbertVis IRanges S4Vectors ShortRead timsac]; }; - ChIPsim = derive2 { name="ChIPsim"; version="1.28.0"; sha256="06f00mviqxgqqli6lkybryl81hvf1ica94sj1zjc9bzm1aiva2fv"; depends=[Biostrings IRanges ShortRead XVector]; }; - ChemmineOB = derive2 { name="ChemmineOB"; version="1.12.0"; sha256="1f5wx3259v5whwy9h8jw7gs52n65gdby8q0lq1z9md0846i8cx6p"; depends=[BH BiocGenerics Rcpp zlibbioc]; }; - ChemmineR = derive2 { name="ChemmineR"; version="2.26.1"; sha256="1i3cdszdb4k0cj3sl1p2fll7vxk47w2fldjzwb3b24qab0xczyih"; depends=[BH BiocGenerics DBI digest ggplot2 Rcpp RCurl rjson]; }; - Chicago = derive2 { name="Chicago"; version="1.2.0"; sha256="1bxb35azi6sdlw0rl043h50cs20ysgmmydlscl5nn96ajk5ahs74"; depends=[data_table Delaporte Hmisc MASS matrixStats]; }; - ChromHeatMap = derive2 { name="ChromHeatMap"; version="1.28.0"; sha256="034cianqg08rkqi2gpw29q144hnnnjb8jrmw180lfsdqbms8hlq3"; depends=[annotate AnnotationDbi Biobase BiocGenerics GenomicRanges IRanges rtracklayer]; }; - ClassifyR = derive2 { name="ClassifyR"; version="1.8.2"; sha256="0mn5hmlyhln7yngqvq8k6ir63jhf71b1h6s3322pppbypq25njsz"; depends=[Biobase BiocParallel locfit ROCR]; }; - Clomial = derive2 { name="Clomial"; version="1.10.0"; sha256="0nabq2nng5hc1rpqhr8riav0gjckzhhfr6i35ff5dxb4md3bgsxm"; depends=[matrixStats permute]; }; - Clonality = derive2 { name="Clonality"; version="1.22.0"; sha256="0qi62476ix6vm0zr7n3zvh6msl8w3lcnk8bn8c7qvynkn82ky4j4"; depends=[DNAcopy]; }; - ClusterSignificance = derive2 { name="ClusterSignificance"; version="1.2.3"; sha256="169mi6xr5jslwgs9vyx0g90n2vp3za6v0hih714bamkk4vsjpzrv"; depends=[pracma princurve RColorBrewer scatterplot3d]; }; - CoCiteStats = derive2 { name="CoCiteStats"; version="1.46.0"; sha256="0jsgcgrr8nnw8mngxcvijri94k6aq2r8svzbrif22m1v7cpddhll"; depends=[AnnotationDbi org_Hs_eg_db]; }; - CoGAPS = derive2 { name="CoGAPS"; version="2.8.0"; sha256="1mbnyim02l1k77r2lchz7k42x9hpj1yvcq4qspyf2rh9d9p03zg6"; depends=[BH gplots RColorBrewer Rcpp]; }; - CoRegNet = derive2 { name="CoRegNet"; version="1.10.0"; sha256="1gh9nkgxm4b583rf33g4qziz989725l42nnfyrjasjcgwb996scz"; depends=[arules igraph shiny]; }; - CompGO = derive2 { name="CompGO"; version="1.10.0"; sha256="1walrgh7bczfzms8syi2vcmjzq1xigxl2jld9v9i7v139h4yvp6d"; depends=[GenomicFeatures ggplot2 pathview pcaMethods RDAVIDWebService reshape2 Rgraphviz rtracklayer TxDb_Mmusculus_UCSC_mm9_knownGene]; }; - ComplexHeatmap = derive2 { name="ComplexHeatmap"; version="1.12.0"; sha256="0r5d75lj0fbskizpmhbv0w4wscpfjfq9k3vbadyfs8wadmp9xvdh"; depends=[circlize colorspace dendextend GetoptLong GlobalOptions RColorBrewer]; }; - ConsensusClusterPlus = derive2 { name="ConsensusClusterPlus"; version="1.38.0"; sha256="0lw8j9gvm227yjh0ya05j4x87a9p6s95cr7sraza0zh6qc70vgzb"; depends=[ALL Biobase cluster]; }; - CopywriteR = derive2 { name="CopywriteR"; version="2.6.0"; sha256="1bwwnsyk7cpgwkagsnn5mv6fv233b0rkhjvbadrh70h8m4anawfj"; depends=[BiocParallel chipseq CopyhelpeR data_table DNAcopy futile_logger GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges matrixStats Rsamtools S4Vectors]; }; - CorMut = derive2 { name="CorMut"; version="1.16.0"; sha256="0c0wx7nldq0wsa5z6l398jnnpkxjkqj9yc490x15kyds9pyazm85"; depends=[igraph seqinr]; }; - Cormotif = derive2 { name="Cormotif"; version="1.20.0"; sha256="0wh5wj3z5q2yk9jw5wmd2adpwhl0vck19flzdwns55bfndz7s5xd"; depends=[affy limma]; }; - CountClust = derive2 { name="CountClust"; version="1.2.0"; sha256="14frvr84dxfp4ily2x40gr7phh8d39ljxnlkz0224cc7v2lnkjz7"; depends=[cowplot flexmix ggplot2 gtools limma maptpx picante plyr reshape2 slam]; }; - CoverageView = derive2 { name="CoverageView"; version="1.10.0"; sha256="1sfhir56rra207z8pl8px40qrc5hca8kf4zmrl2pk9zr7ksbd1z5"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors]; }; - CrispRVariants = derive2 { name="CrispRVariants"; version="1.2.0"; sha256="0dvzyz3rxwd5blfcaf05viy35w7n8681wzb2lr5zdc44nm92d3kz"; depends=[AnnotationDbi BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges reshape2 Rsamtools S4Vectors]; }; - CytoML = derive2 { name="CytoML"; version="1.0.1"; sha256="034ki5bi83m04c9l2m636vb5l1wj0nmvyphj1db7bhz8i0h8as7w"; depends=[base64enc Biobase data_table flowCore flowUtils flowWorkspace graph jsonlite ncdfFlow openCyto RBGL Rgraphviz XML]; }; - DAPAR = derive2 { name="DAPAR"; version="1.6.0"; sha256="0v176my80p7p26azczw75yqi9zdfvxjf35hjr5hprhm795bppavx"; depends=[Cairo cp4p doParallel foreach ggplot2 gplots impute imputeLCMD knitr lattice limma Matrix MSnbase norm openxlsx pcaMethods png preprocessCore RColorBrewer reshape2 scales tmvtnorm vioplot]; }; - DART = derive2 { name="DART"; version="1.22.0"; sha256="0ysi99wlhb6v98nfqd6vss0c14sh87p0v13099dll18ijifvfkqr"; depends=[igraph]; }; - DBChIP = derive2 { name="DBChIP"; version="1.18.0"; sha256="00jwf6163dbrglbq1fba3380ad7wxd8swj2xcm650m41i2nf2rqz"; depends=[DESeq edgeR]; }; - DChIPRep = derive2 { name="DChIPRep"; version="1.4.0"; sha256="0l31w5xs2g9bdyy191gpslp41m9k42pq5lzd86vpm1xw0792q9w0"; depends=[assertthat ChIPpeakAnno DESeq2 fdrtool GenomicRanges ggplot2 plyr purrr reshape2 S4Vectors smoothmest soGGi SummarizedExperiment tidyr]; }; - DECIPHER = derive2 { name="DECIPHER"; version="2.2.0"; sha256="07i9dgw4hck0jgxsj80sc68wf1d7d7zqxy8vbpf1ynf3m1zwkynp"; depends=[Biostrings DBI IRanges RSQLite S4Vectors XVector]; }; - DEDS = derive2 { name="DEDS"; version="1.48.0"; sha256="18bb887dhifdkcp0bgg4dfcx3nlwxnrakh0r000i856m5fn79zd5"; depends=[]; }; - DEFormats = derive2 { name="DEFormats"; version="1.2.0"; sha256="047cvxbzs0mg14y9005f40xjgj1pgik43jb3q5z1inipqgmj1sn4"; depends=[checkmate DESeq2 edgeR GenomicRanges SummarizedExperiment]; }; - DEGraph = derive2 { name="DEGraph"; version="1.26.0"; sha256="1s7gjraaqvndr590wbnvjq4wik6bmbdijl6l0ribd5d7r5zic0gm"; depends=[graph KEGGgraph lattice mvtnorm NCIgraph R_methodsS3 R_utils RBGL Rgraphviz rrcov]; }; - DEGreport = derive2 { name="DEGreport"; version="1.10.1"; sha256="0llhniqryz3fckgmkc89h89ipc7ambi323y2awwyqc080d7ph37p"; depends=[cluster coda dplyr edgeR ggplot2 gridExtra knitr logging Nozzle_R1 pheatmap quantreg reshape tidyr]; }; - DEGseq = derive2 { name="DEGseq"; version="1.28.0"; sha256="0p9m0bky2fa320nw22bfa270zj91aywmyp0vs67x3x4aimhirz7g"; depends=[qvalue samr]; }; - DESeq = derive2 { name="DESeq"; version="1.26.0"; sha256="18f0400pcmla88kc2prscw0skkf7bww0mnkrj6hhxyy79dhzdy86"; depends=[Biobase BiocGenerics genefilter geneplotter lattice locfit MASS RColorBrewer]; }; - DESeq2 = derive2 { name="DESeq2"; version="1.14.1"; sha256="1walwkqryn1gnwz7zryr5764a0p6ia7ag4w6w9n8fskg8dkg0fqs"; depends=[Biobase BiocGenerics BiocParallel genefilter geneplotter GenomicRanges ggplot2 Hmisc IRanges locfit Rcpp RcppArmadillo S4Vectors SummarizedExperiment]; }; - DEXSeq = derive2 { name="DEXSeq"; version="1.20.2"; sha256="1j3ll3417smxx1akbi3kk1r2p0m8jfrgfd35rhmr3q8b3lz3x9pw"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel biomaRt DESeq2 genefilter geneplotter GenomicRanges hwriter IRanges RColorBrewer Rsamtools S4Vectors statmod stringr SummarizedExperiment]; }; - DEsubs = derive2 { name="DEsubs"; version="1.0.2"; sha256="0v35x38sh6i69m7wjwzyyjhcx88wrrz3gr5w1r80cg5rvjl8bhch"; depends=[circlize DESeq DESeq2 EBSeq edgeR ggplot2 graph igraph jsonlite limma locfit Matrix NBPSeq pheatmap RBGL samr]; }; - DFP = derive2 { name="DFP"; version="1.32.0"; sha256="08jjhzqr4yv2zwdgn43r3bvh2hw0fsamicyzdwcfkamvw9p5ipxf"; depends=[Biobase]; }; - DMRcaller = derive2 { name="DMRcaller"; version="1.6.0"; sha256="196km32s5z881hsranycsmmqk1nxr3vdfhwdy9l1j179b64vz09w"; depends=[GenomicRanges IRanges Rcpp RcppRoll S4Vectors]; }; - DMRcate = derive2 { name="DMRcate"; version="1.10.10"; sha256="1snsq6j1na9z78mks43fhgz2iayizm4vd51kx4m8zikc198h3xw1"; depends=[DMRcatedata DSS GenomicRanges Gviz IRanges limma minfi missMethyl plyr S4Vectors]; }; - DMRforPairs = derive2 { name="DMRforPairs"; version="1.10.0"; sha256="0flr8a8bzhwcs4hhrcb8ilzr1pzlgic4d5nm8gsqnrgjdjh05np7"; depends=[GenomicRanges Gviz R2HTML]; }; - DNABarcodes = derive2 { name="DNABarcodes"; version="1.4.0"; sha256="13xc3abfm2yg7s1h0way99vcj3577p3j183jhqq4ii86c6y9c6k7"; depends=[BH Matrix Rcpp]; }; - DNAcopy = derive2 { name="DNAcopy"; version="1.48.0"; sha256="1idyvfvy7xx8k9vk00y4k3819qmip8iqm809j3vpxabmsn7r9zyh"; depends=[]; }; - DNAshapeR = derive2 { name="DNAshapeR"; version="1.2.0"; sha256="0zm1c989h34iqk0w9sgz7bdz3h0njns856yhc1q7n6vfqnhhygsz"; depends=[Biostrings fields GenomicRanges Rcpp]; }; - DOQTL = derive2 { name="DOQTL"; version="1.10.0"; sha256="0fn444vc1w274079a3yn79rnv6i1nhqp9jwyg0qkih53bg49519x"; depends=[annotate annotationTools Biobase BiocGenerics biomaRt BSgenome_Mmusculus_UCSC_mm10 corpcor doParallel foreach fpc GenomicRanges hwriter IRanges iterators mclust QTLRel regress rhdf5 Rsamtools RUnit VariantAnnotation XML]; }; - DOSE = derive2 { name="DOSE"; version="3.0.10"; sha256="13m5akx9hi11906sbrbcz8q36m9h8i0wqm5323bdnlprv217m8fq"; depends=[AnnotationDbi BiocParallel DO_db fgsea ggplot2 GOSemSim igraph qvalue reshape2 S4Vectors scales]; }; - DRIMSeq = derive2 { name="DRIMSeq"; version="1.2.0"; sha256="1iiqb3ccxh9y2sc913sw7lcd16bq54kj6z5hk6f7khsgwy84g5q6"; depends=[BiocGenerics BiocParallel edgeR GenomicRanges ggplot2 IRanges reshape2 S4Vectors]; }; - DSS = derive2 { name="DSS"; version="2.14.0"; sha256="09452x6cs16b2fxx7h74midxkla7cc46paqkxhilx82nf2yrjzrm"; depends=[Biobase bsseq]; }; - DTA = derive2 { name="DTA"; version="2.20.0"; sha256="16bp4gy8ifc3ag24d6npfzvwhv4by371qilqsxnmd677pq75ccx6"; depends=[LSD scatterplot3d]; }; - DeMAND = derive2 { name="DeMAND"; version="1.4.0"; sha256="03w9vcv8ji82hhyy70mh5smib565gzjdp4bl7i1h1y3wjmsrq760"; depends=[KernSmooth]; }; - DeconRNASeq = derive2 { name="DeconRNASeq"; version="1.16.0"; sha256="0p8vg1b8arpv01cdgq37c0mfmkd824b47cd8cpdzf7nhrhq53w65"; depends=[ggplot2 limSolve pcaMethods]; }; - DeepBlueR = derive2 { name="DeepBlueR"; version="1.0.11"; sha256="1zqr0bdsf4xlkdqrpg1ihc287gppw56p9p9smy97npm2dnqygw6f"; depends=[data_table diffr dplyr filehash foreach GenomeInfoDb GenomicRanges R_utils RCurl rjson rtracklayer settings stringr withr XML]; }; - DiffBind = derive2 { name="DiffBind"; version="2.2.12"; sha256="0w3dwhjkf0sc7bd3m13gwym03j3pyli3xy2y7dqsqn8mhm64bqcy"; depends=[amap BiocParallel DESeq2 dplyr edgeR GenomicAlignments GenomicRanges gplots IRanges lattice limma locfit RColorBrewer Rcpp Rsamtools S4Vectors SummarizedExperiment systemPipeR zlibbioc]; }; - DiffLogo = derive2 { name="DiffLogo"; version="1.4.0"; sha256="1pla3izw79il49vlrp21shyq13xvg6vbayrjs6kbhjih738x0i5j"; depends=[cba]; }; - Director = derive2 { name="Director"; version="1.0.0"; sha256="0g0z2pp4jk9a3sfcidq8abgwnki8za73wzvpm4xdzy5g6lrcf3y7"; depends=[htmltools]; }; - DirichletMultinomial = derive2 { name="DirichletMultinomial"; version="1.16.0"; sha256="0jrjragn40qjbrm7amg066jbl1ypxzs3h5cbd7vv35iwwvzgmgr3"; depends=[BiocGenerics IRanges S4Vectors]; }; - DriverNet = derive2 { name="DriverNet"; version="1.14.0"; sha256="19n396565sngzc3pk2dibqsza9pmp8dm1nrhlipv663r46s6j6kz"; depends=[]; }; - DrugVsDisease = derive2 { name="DrugVsDisease"; version="2.14.0"; sha256="0pbaa9dg8g0bwky2mjr3wjpavf82xd564c1wx813ivsdx8a69pnm"; depends=[affy annotate ArrayExpress BiocGenerics biomaRt cMap2data DrugVsDiseasedata GEOquery hgu133a_db hgu133a2_db hgu133plus2_db limma qvalue RUnit xtable]; }; - DupChecker = derive2 { name="DupChecker"; version="1.12.0"; sha256="0yrlx3w8ndij5ynfyjh0y5xyldsnsyhgw7ilnx728vfxp7zgw6fv"; depends=[R_utils RCurl]; }; - DynDoc = derive2 { name="DynDoc"; version="1.52.0"; sha256="0nd7873m3zgyx1ryyhy9bsvzzkvdvqggk5sbnai4aph2hy2lbk1a"; depends=[]; }; - EBImage = derive2 { name="EBImage"; version="4.16.0"; sha256="0gbl9waszvkavw68npsjq1c7yhqljgb2r0qx4f8i05cp8i0yr3rx"; depends=[abind BiocGenerics fftwtools jpeg locfit png tiff]; }; - EBSEA = derive2 { name="EBSEA"; version="1.2.0"; sha256="1ikkj4mmr1rdcxsy1anc3ik3vy1hn0v262h17751y64bk2djvycj"; depends=[edgeR gtools limma]; }; - EBSeq = derive2 { name="EBSeq"; version="1.14.0"; sha256="14ny417fijjnrkz5hjj8z8s6dbrqxx0cyi85585g06nrv8mm1hhl"; depends=[blockmodeling gplots testthat]; }; - EBSeqHMM = derive2 { name="EBSeqHMM"; version="1.8.0"; sha256="0ahmsxqixapdjpwsr1wnmk7lq5fnbqpq7vsbs9qk2a5pl2lxzqd0"; depends=[EBSeq]; }; - EBarrays = derive2 { name="EBarrays"; version="2.38.0"; sha256="1r00rdd5zlm29jc0yq3jns08cv67f9wk6lia56m52zscqcji6nvw"; depends=[Biobase cluster lattice]; }; - EBcoexpress = derive2 { name="EBcoexpress"; version="1.18.0"; sha256="0lhcvd49rhmcdbmxizivcn7wi9bv0av2p9mz4grpnb3a0r6hjgdm"; depends=[EBarrays mclust minqa]; }; - EDASeq = derive2 { name="EDASeq"; version="2.8.0"; sha256="0biwxx1ssqj3isc15i7crm05cyapm47ny4jks8wr9pqha715myai"; depends=[AnnotationDbi aroma_light Biobase BiocGenerics biomaRt Biostrings DESeq GenomicFeatures GenomicRanges IRanges Rsamtools ShortRead]; }; - EDDA = derive2 { name="EDDA"; version="1.12.0"; sha256="1ra5jdngpiif9wd322ncg72ik2wkapcn7z3raw6rb5ii8g5706fc"; depends=[baySeq DESeq edgeR Rcpp ROCR snow]; }; - EGAD = derive2 { name="EGAD"; version="1.2.0"; sha256="04zaykhl3dkaqy73dsgj0kqghisxgck2fjbwrvlc9j8rb2rggnmd"; depends=[affy arrayQualityMetrics Biobase GEOquery gplots igraph impute limma MASS Matrix plyr RColorBrewer RCurl zoo]; }; - EGSEA = derive2 { name="EGSEA"; version="1.2.0"; sha256="0wd4a89l8isbgqcyls8pw5h1l68qd4k1c7nxci7q4d86vrv3xzwd"; depends=[AnnotationDbi Biobase edgeR EGSEAdata gage ggplot2 globaltest gplots GSVA HTMLUtils hwriter limma metap org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db PADOG pathview RColorBrewer safe stringi topGO]; }; - ELBOW = derive2 { name="ELBOW"; version="1.10.0"; sha256="0x86czjfzpkxs9z6fn6siapwj6320f096bzg3bfjzaa387g89sk0"; depends=[]; }; - ELMER = derive2 { name="ELMER"; version="1.4.1"; sha256="1q60yi3wqjmm2y6dfl5qjgxzhdjd22vsdsnan8mw1fl2kljjlbdl"; depends=[BiocGenerics ELMER_data GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gridExtra Homo_sapiens IlluminaHumanMethylation450kanno_ilmn12_hg19 IRanges minfi reshape S4Vectors]; }; - EMDomics = derive2 { name="EMDomics"; version="2.4.0"; sha256="0fkyvmib34kwz4zzp3f0miw9bhn87hmbk0j94gla2fgxvxwby1sf"; depends=[BiocParallel CDFt emdist ggplot2 matrixStats preprocessCore]; }; - ENCODExplorer = derive2 { name="ENCODExplorer"; version="2.0.6"; sha256="0876lfyh5584nq6sqz3yyc4ixl1pfyx1wamhdfcyq6c86yi5prgp"; depends=[data_table dplyr DT jsonlite RCurl shiny shinythemes stringi stringr tidyr]; }; - ENVISIONQuery = derive2 { name="ENVISIONQuery"; version="1.22.0"; sha256="1h3nz1k2rl2b14hh61yqq3dng3h3k3qp48w8izfsdwjm9imxs3kb"; depends=[rJava XML]; }; - ENmix = derive2 { name="ENmix"; version="1.10.0"; sha256="17ppsfbl68fsck4nyda4x8k5sdymn52dgkvky1q4cri3xvn2kkpj"; depends=[Biobase doParallel foreach geneplotter impute MASS minfi preprocessCore sva wateRmelon]; }; - EWCE = derive2 { name="EWCE"; version="1.2.0"; sha256="1iq62cn389sa0h3y6rj61n51a1wkjcpnq9a3la2gavddd0iqsbl8"; depends=[biomaRt ggplot2 reshape2]; }; - EasyqpcR = derive2 { name="EasyqpcR"; version="1.16.0"; sha256="1hlhvpz18q6wfwmfj0fs8saacpyaild2p7qwmgmndcv2lqpmgcrh"; depends=[gWidgetsRGtk2 matrixStats plotrix plyr]; }; - EmpiricalBrownsMethod = derive2 { name="EmpiricalBrownsMethod"; version="1.2.0"; sha256="0l7dq2ww2vi39iipazfv71i0bw6j029x3llbnd15sf7lpsplc9df"; depends=[]; }; - EnrichedHeatmap = derive2 { name="EnrichedHeatmap"; version="1.4.0"; sha256="013y7iygzf7vy1g34c2ww55m4w1173mxbwi4pn6x75r1fmnmvkai"; depends=[ComplexHeatmap GenomicRanges GetoptLong IRanges locfit matrixStats]; }; - EnrichmentBrowser = derive2 { name="EnrichmentBrowser"; version="2.4.6"; sha256="1xijwplmlcdi2rqp8frsbwgxby6k2mnjbfv2dw560rgcmys7n395"; depends=[AnnotationDbi Biobase biocGraph ComplexHeatmap DESeq2 EDASeq edgeR geneplotter GO_db graph GSEABase hwriter KEGGgraph KEGGREST limma MASS pathview ReportingTools Rgraphviz S4Vectors safe SPIA SummarizedExperiment topGO]; }; - ExiMiR = derive2 { name="ExiMiR"; version="2.16.0"; sha256="11pr3jlzm8hm4bizpgwvmr1ylb41rd487mp71890paqwhv91abq1"; depends=[affy affyio Biobase limma preprocessCore]; }; - ExperimentHub = derive2 { name="ExperimentHub"; version="1.0.0"; sha256="15254v73vi7vr7cky29i58np5ljq7iawmffrb1vir54snpgw72q9"; depends=[AnnotationHub BiocGenerics BiocInstaller S4Vectors]; }; - ExperimentHubData = derive2 { name="ExperimentHubData"; version="1.0.0"; sha256="1i55z69idxk3zpiypid045mssvfbysbincxfp0z8sh5gf0dipj9d"; depends=[AnnotationHubData BiocCheck BiocGenerics BiocInstaller curl DBI ExperimentHub httr S4Vectors]; }; - ExpressionAtlas = derive2 { name="ExpressionAtlas"; version="1.2.0"; sha256="07asxjzplx05jkxm05lxny4np9yw0i9ir0pbhg76dxnx7k1x1bv4"; depends=[Biobase httr limma S4Vectors SummarizedExperiment XML xml2]; }; - ExpressionView = derive2 { name="ExpressionView"; version="1.26.0"; sha256="0fy2cay5s9ypbrdjj6v5n8l99pq0fggw6gl9xh451vr2j0c8cmr8"; depends=[AnnotationDbi bitops caTools eisa GO_db isa2 KEGG_db]; }; - FEM = derive2 { name="FEM"; version="3.2.0"; sha256="1ivhzap6hcdwpy8yf1sl4gh53c24nzm22br08z8g99wl3q3apsg0"; depends=[AnnotationDbi BiocGenerics corrplot graph igraph impute limma marray Matrix org_Hs_eg_db]; }; - FGNet = derive2 { name="FGNet"; version="3.8.0"; sha256="07v32575vws879745zc1c75rlwbdrybijhbc3hs7s4w4nz574lfc"; depends=[hwriter igraph plotrix png R_utils RColorBrewer reshape2 XML]; }; - FISHalyseR = derive2 { name="FISHalyseR"; version="1.8.0"; sha256="0fn92g2zzv35xhd28p5zb3qqhqy9hflz4d1sk3cjajpav26k9dnd"; depends=[abind EBImage]; }; - FRGEpistasis = derive2 { name="FRGEpistasis"; version="1.10.0"; sha256="0ccp7s4qg2mf0mnz9hvasscgc18nmqmjrfwj9k2x1nv6rhph51cv"; depends=[fda MASS]; }; - FamAgg = derive2 { name="FamAgg"; version="1.2.1"; sha256="16iaj8zn12kq89sksq5dqgfxyb5048vdfhvjqgvp455vi74jkx9z"; depends=[BiocGenerics gap igraph kinship2 Matrix survey]; }; - FindMyFriends = derive2 { name="FindMyFriends"; version="1.4.0"; sha256="1r2jqrsgsmrlz3fa8qp7pb4bxh6am2xmgafnk5xh679kyvdhp4dh"; depends=[Biobase BiocGenerics BiocParallel Biostrings digest dplyr filehash ggdendro ggplot2 gtable igraph IRanges kebabs Matrix Rcpp reshape2 S4Vectors]; }; - FitHiC = derive2 { name="FitHiC"; version="1.0.0"; sha256="1pzywxdn2qkkfkhnf1n4d9fnvz3kz4301kxqmszj3d10z2wlhzab"; depends=[data_table fdrtool Rcpp]; }; - FlowRepositoryR = derive2 { name="FlowRepositoryR"; version="1.6.0"; sha256="06z3wandk8vaabkbmm0w6jaknimysfm16r351alg28ajznxqiw1n"; depends=[jsonlite RCurl XML]; }; - FlowSOM = derive2 { name="FlowSOM"; version="1.6.0"; sha256="1lbyxhs59cc3mfqbgskgnx5vbly6rr2dswn3hwlw5nh2idpwnwfn"; depends=[BiocGenerics ConsensusClusterPlus flowCore flowUtils igraph tsne XML]; }; - FourCSeq = derive2 { name="FourCSeq"; version="1.8.0"; sha256="0n0zsmh48vy756wg3rmnsqsl0kyy8wl1sm97c0w1yp4wpak36qqp"; depends=[Biobase Biostrings DESeq2 fda GenomicAlignments GenomicRanges ggbio ggplot2 gtools LSD Matrix reshape2 Rsamtools rtracklayer SummarizedExperiment]; }; - FunChIP = derive2 { name="FunChIP"; version="1.0.0"; sha256="1l0hyg3scp0b1xsx7xl8x6629iaf155k50vykjk17kb6aand5p19"; depends=[doParallel fda foreach GenomeInfoDb GenomicAlignments GenomicRanges Rcpp Rsamtools shiny]; }; - FunciSNP = derive2 { name="FunciSNP"; version="1.18.0"; sha256="03wzrrdhnp6svf4vy907h6bbnpfgrbqhqabsah37qzld15qm2xs2"; depends=[Biobase BiocGenerics ChIPpeakAnno FunciSNP_data GenomicRanges ggplot2 IRanges plyr reshape Rsamtools rtracklayer S4Vectors scales snpStats TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; }; - GAprediction = derive2 { name="GAprediction"; version="1.0.0"; sha256="18675g9405x4bhbgk1y3lc011cz409qgqgmnsr9pg1cr1cpfcgqh"; depends=[glmnet Matrix]; }; - GEM = derive2 { name="GEM"; version="1.0.0"; sha256="12y8pnbvfmid0spid61nxlf79nnq64yd1q6as7mi95nqgf498lcb"; depends=[ggplot2]; }; - GENE_E = derive2 { name="GENE.E"; version="1.14.0"; sha256="07qc96cja92zbs87qmrpxl6jym96vazygybmjvkxzb3cmw8ivcrg"; depends=[RCurl rhdf5]; }; - GENESIS = derive2 { name="GENESIS"; version="2.4.0"; sha256="1gknm10fjgry5arz60y6yvkdpiwf1nkvyyxdgh2jbslz6ypgcy57"; depends=[Biobase gdsfmt graph GWASTools SeqArray SeqVarTools]; }; - GEOmetadb = derive2 { name="GEOmetadb"; version="1.34.0"; sha256="0gjzhx3x1945ny8wqp1w6gwgbx81wsqbgc9l7sd2wqnf85w5y513"; depends=[GEOquery RSQLite]; }; - GEOquery = derive2 { name="GEOquery"; version="2.40.0"; sha256="1p4dsmbibhrjdffkh8z1fff4j85jczwn4djnnpj2ifvz2x05q3vc"; depends=[Biobase httr RCurl XML]; }; - GEOsearch = derive2 { name="GEOsearch"; version="1.0.0"; sha256="1xz3mizjh1nfmc4726jjj38qdn5byjwlinwbd3j0k2qw5dvzmjaj"; depends=[org_Hs_eg_db org_Mm_eg_db RCurl]; }; - GEOsubmission = derive2 { name="GEOsubmission"; version="1.26.1"; sha256="0niagqjl5sqi4frjj23glgib0js1gf7p7lj4qbz8lvkg1arj2kba"; depends=[affy Biobase]; }; - GEWIST = derive2 { name="GEWIST"; version="1.18.0"; sha256="1faw43mvv3v9yl9lbllx0gj588i7r9rfm453mwq80v9adllrnnkw"; depends=[car]; }; - GGBase = derive2 { name="GGBase"; version="3.36.0"; sha256="1wmxv6wl6d050xjc0sc0z2i74y3xnnr6vmdynipcncbsrmsw91gv"; depends=[AnnotationDbi Biobase BiocGenerics digest genefilter GenomicRanges IRanges limma Matrix S4Vectors snpStats SummarizedExperiment]; }; - GGtools = derive2 { name="GGtools"; version="5.10.1"; sha256="1cngmdk9ggp38gbp3kqs74ixa5ak5cm1n09z1lrhg110byim79ry"; depends=[AnnotationDbi biglm Biobase BiocGenerics Biostrings bit data_table ff GenomeInfoDb GenomicRanges GGBase ggplot2 Gviz hexbin Homo_sapiens IRanges iterators reshape2 ROCR Rsamtools rtracklayer S4Vectors snpStats VariantAnnotation]; }; - GLAD = derive2 { name="GLAD"; version="2.38.0"; sha256="1din6jgb2n6qs6g10133mc506y3bmc2gpwdcj6q8fm3jwq3iw769"; depends=[]; }; - GMRP = derive2 { name="GMRP"; version="1.2.0"; sha256="17n77baq513wxnh0dh313h7bpj01jkfs4ybac1w5bmsqbafnakz8"; depends=[diagram GenomicRanges plotrix]; }; - GOFunction = derive2 { name="GOFunction"; version="1.22.0"; sha256="1gn9z2si5jg7db28ldmgj03b0acv9mq884srmgjyq3ar705hkvd9"; depends=[AnnotationDbi Biobase DBI GO_db graph Rgraphviz SparseM]; }; - GOSemSim = derive2 { name="GOSemSim"; version="2.0.4"; sha256="1ii12y5yb6mby76c193ampvjk0klsx3kl0h6qmr3359sdx9mcbiq"; depends=[AnnotationDbi GO_db Rcpp]; }; - GOSim = derive2 { name="GOSim"; version="1.12.0"; sha256="0539da5ljil1l158bdrj7xmgj7da33kwqk8ng5snwv9jzvmynrdn"; depends=[annotate AnnotationDbi cluster corpcor flexmix GO_db graph Matrix org_Hs_eg_db RBGL Rcpp topGO]; }; - GOTHiC = derive2 { name="GOTHiC"; version="1.10.0"; sha256="17n51iw61xyfiladvrz36ksvj6sdfgmhbxs9hx25g3j5biv0sxw0"; depends=[BiocGenerics Biostrings BSgenome data_table GenomicRanges ggplot2 IRanges Rsamtools rtracklayer S4Vectors ShortRead]; }; - GOexpress = derive2 { name="GOexpress"; version="1.8.1"; sha256="00gnznvyg2mpk6cv5jk842h71awikw3qbzg43vl72cxcb8iai7fj"; depends=[Biobase biomaRt ggplot2 gplots randomForest RColorBrewer RCurl stringr VennDiagram]; }; - GOpro = derive2 { name="GOpro"; version="1.0.0"; sha256="0wypc72p940b2jh8s83k4hs5m4flvpr724xgzscygcn3v25b23c7"; depends=[AnnotationDbi BH dendextend doParallel foreach GO_db IRanges MultiAssayExperiment org_Hs_eg_db Rcpp S4Vectors]; }; - GOstats = derive2 { name="GOstats"; version="2.40.0"; sha256="0g2czm94zhzx92z7y2r4mjfxhwml7bhab2db6820ks8nkw1zvr9n"; depends=[annotate AnnotationDbi AnnotationForge Biobase Category GO_db graph RBGL]; }; - GOsummaries = derive2 { name="GOsummaries"; version="2.8.0"; sha256="05aws7ln6jxisgmxkx3m3lfz87i8ayy8bdm8lgjyhhskf5gq7yzn"; depends=[ggplot2 gProfileR gtable limma plyr Rcpp reshape2]; }; - GRENITS = derive2 { name="GRENITS"; version="1.26.0"; sha256="1x1rxs3id7kbp7lf3a8460qh6p0mlhx1w33yyy20cd45y407xxji"; depends=[ggplot2 Rcpp RcppArmadillo reshape2]; }; - GRmetrics = derive2 { name="GRmetrics"; version="1.0.0"; sha256="0pviyq23gsivqxm9pzxa5d911f32m3p8gkav9hbsn2fm2x7g8k07"; depends=[drc ggplot2 plotly S4Vectors SummarizedExperiment]; }; - GSALightning = derive2 { name="GSALightning"; version="1.2.0"; sha256="0hxjlnzwk16s1qxnd1dsd8f9zbwqnpq7vyrr3ag6yq4xm6rksr9v"; depends=[data_table Matrix]; }; - GSAR = derive2 { name="GSAR"; version="1.8.0"; sha256="0wdz3jx1dnw6w71r3spfi09nqyndvb0f610qci50s824k593aglp"; depends=[igraph]; }; - GSCA = derive2 { name="GSCA"; version="2.4.0"; sha256="1fxc3s891flai43j8i7bp9q3v6ynkbd4yx6y5rgvf8360bl62s3z"; depends=[ggplot2 gplots RColorBrewer reshape2 rhdf5 shiny sp]; }; - GSEABase = derive2 { name="GSEABase"; version="1.36.0"; sha256="0l2x7yj7lfb0m2dmsav5ib026dikpgl4crdckrnj776yy08lgxpj"; depends=[annotate AnnotationDbi Biobase BiocGenerics graph XML]; }; - GSEAlm = derive2 { name="GSEAlm"; version="1.34.0"; sha256="0ykxpki36spgb562805k5hi2cyp984gjr2flq591vc8qhz87d1ry"; depends=[Biobase]; }; - GSRI = derive2 { name="GSRI"; version="2.22.0"; sha256="1dml01y75yc2f3ra65ha4ah991mvlzdnhkzllqxlah0gayvbhw52"; depends=[Biobase fdrtool genefilter GSEABase les]; }; - GSReg = derive2 { name="GSReg"; version="1.8.0"; sha256="0ccghcpdpaa3dfaxbg682jll7gj6yh6513adffyi7q9qif6rz4jx"; depends=[]; }; - GSVA = derive2 { name="GSVA"; version="1.22.4"; sha256="1v0znan5xyd1b3cr83ag83sk5ipnifn3882qcnfz6d26b5rq5cdz"; depends=[Biobase BiocGenerics GSEABase]; }; - GUIDEseq = derive2 { name="GUIDEseq"; version="1.4.1"; sha256="0n21pd96q9xj6ljamq40zld0276dj4raiwdak8l27y37n1xq5bna"; depends=[BiocGenerics BiocParallel Biostrings BSgenome ChIPpeakAnno CRISPRseek data_table GenomeInfoDb GenomicAlignments GenomicRanges hash IRanges limma matrixStats Rsamtools S4Vectors]; }; - GWASTools = derive2 { name="GWASTools"; version="1.20.0"; sha256="07ql1iihqvmks7pzlwab6hffsp7d6by8n7sq9mgi5zqwdy1kdyw3"; depends=[Biobase DBI DNAcopy gdsfmt GWASExactHW lmtest logistf ncdf4 quantsmooth RSQLite sandwich survival]; }; - GenRank = derive2 { name="GenRank"; version="1.2.0"; sha256="1sp43mr40dnfmxavqrn3bhbwkvrx229q7kvbwv4xbzl9980y2mwq"; depends=[matrixStats reshape2 survcomp]; }; - GenVisR = derive2 { name="GenVisR"; version="1.4.1"; sha256="0a4nnq7nkmza8kyx6jq321rzfh843cj9yjn36pqam2w3gkx4a5q2"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings DBI FField GenomicFeatures GenomicRanges ggplot2 gridExtra gtable gtools IRanges plyr reshape2 Rsamtools scales viridis]; }; - GeneAnswers = derive2 { name="GeneAnswers"; version="2.16.0"; sha256="164vas8gkrs1q9s3vhnb1f1lkqlndd5n2v7q0hb0rndjg0b08ryb"; depends=[annotate Biobase downloader Heatplus igraph MASS RBGL RColorBrewer RCurl RSQLite XML]; }; - GeneBreak = derive2 { name="GeneBreak"; version="1.4.0"; sha256="153a1ca44apavrf09fc8gwyvqbln6rwjpcjq6cxa2ixw714xvmk1"; depends=[CGHbase CGHcall GenomicRanges QDNAseq]; }; - GeneExpressionSignature = derive2 { name="GeneExpressionSignature"; version="1.20.0"; sha256="0v26wyibllqw1mwncb4h8m3bg0x8zm9iv6apadp7n91x0zaqflmd"; depends=[Biobase PGSEA]; }; - GeneGA = derive2 { name="GeneGA"; version="1.24.0"; sha256="19jr504whini0csk8cir3rs8fwccnrpf84kpnhphsc6j7ypy45qd"; depends=[hash seqinr]; }; - GeneGeneInteR = derive2 { name="GeneGeneInteR"; version="1.0.0"; sha256="15i67aqjvss9g8irh6ifr000y37irxg2glpg9qajm9kpwjvsr8kf"; depends=[data_table FactoMineR GenomicRanges GGtools igraph IRanges kernlab mvtnorm plspm rioja Rsamtools snpStats]; }; - GeneMeta = derive2 { name="GeneMeta"; version="1.46.0"; sha256="1zxn1wm8wzia561hgljdyp1djidr1bzzb5kxpb73jwpxb43j8pd5"; depends=[Biobase genefilter]; }; - GeneNetworkBuilder = derive2 { name="GeneNetworkBuilder"; version="1.16.0"; sha256="0mkd7ny0h0j53daxz7zwcbgnk85rmkpbsj0p4l205g3nfwa06iip"; depends=[graph plyr Rcpp]; }; - GeneOverlap = derive2 { name="GeneOverlap"; version="1.10.0"; sha256="1y8n4r2gps65sz1yhhzr1n0frv79vwm2j9vxvs75v6c3a236x4r0"; depends=[gplots RColorBrewer]; }; - GeneRegionScan = derive2 { name="GeneRegionScan"; version="1.30.0"; sha256="0ac6qqzlnl29hkxyxyn6rvffg8klfp9qps0bx9hgmmhj60iwzqdi"; depends=[affxparser Biobase Biostrings RColorBrewer S4Vectors]; }; - GeneSelectMMD = derive2 { name="GeneSelectMMD"; version="2.18.0"; sha256="04asjxn49vipaidammf568gf4gfck6d0300hdydxkpbzm8frpn0n"; depends=[Biobase limma MASS survival]; }; - GeneSelector = derive2 { name="GeneSelector"; version="2.24.0"; sha256="1d99hqmp5jrwaq08svzvliqfli9r4731gmj3d9ly6rqaiba003zf"; depends=[Biobase limma multtest samr siggenes]; }; - GeneticsDesign = derive2 { name="GeneticsDesign"; version="1.42.0"; sha256="0mx55dqrib9ik0nvh96l5nz80hslz7ihi2lri98nlfanm1ckmgjn"; depends=[gmodels gtools mvtnorm]; }; - GeneticsPed = derive2 { name="GeneticsPed"; version="1.36.0"; sha256="0z4zqni9sncigi89c2vvw7pian2zlni9rhbc9l39ig2970zyvh7s"; depends=[gdata genetics MASS]; }; - GenoGAM = derive2 { name="GenoGAM"; version="1.2.1"; sha256="04r18wff2zjkb0hh731ssl7jplb8kn4lrmls0zzfl6iqgh539vvf"; depends=[BiocParallel Biostrings data_table DESeq2 futile_logger GenomeInfoDb GenomicAlignments GenomicRanges IRanges mgcv reshape2 Rsamtools S4Vectors SummarizedExperiment]; }; - GenomeGraphs = derive2 { name="GenomeGraphs"; version="1.34.0"; sha256="0088s233lj2p0vy5wdw049zgakppvzk1zf07k628yaz8ckbgjg99"; depends=[biomaRt]; }; - GenomeInfoDb = derive2 { name="GenomeInfoDb"; version="1.10.3"; sha256="18g24cf6b3vi13w85ki2mam6i2gl4yxr1zchyga34xc3dkdngzrw"; depends=[BiocGenerics IRanges RCurl S4Vectors]; }; - GenomicAlignments = derive2 { name="GenomicAlignments"; version="1.10.1"; sha256="1dilghbsyf64iz5c0kib2c7if72x7almd5w3ali09a2b2ff2mcjk"; depends=[BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors SummarizedExperiment]; }; - GenomicFeatures = derive2 { name="GenomicFeatures"; version="1.26.4"; sha256="1y16lqach0v3ym5zhdhj4r2imfi0kpa0djlb51hj85yf7xkzwdlb"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings DBI GenomeInfoDb GenomicRanges IRanges RCurl RSQLite rtracklayer S4Vectors XVector]; }; - GenomicFiles = derive2 { name="GenomicFiles"; version="1.10.3"; sha256="03yqkl2yjdz999j1y7azcs16vg0vydrqs6sxcfkgn11fiwi6i3l2"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; - GenomicInteractions = derive2 { name="GenomicInteractions"; version="1.8.1"; sha256="1lqwyz6ms6iw8sl2l52xbaaag10lp3k8s03c9326hxhyy3ba7c5f"; depends=[Biobase BiocGenerics data_table dplyr GenomeInfoDb GenomicRanges ggplot2 gridExtra Gviz igraph InteractionSet IRanges Rsamtools rtracklayer S4Vectors stringr]; }; - GenomicRanges = derive2 { name="GenomicRanges"; version="1.26.4"; sha256="1789ycqzv20d8p1axkxrhsz9v0ww6w1dk2mfvm85p8j53zd1f67c"; depends=[BiocGenerics GenomeInfoDb IRanges S4Vectors XVector]; }; - GenomicTuples = derive2 { name="GenomicTuples"; version="1.8.3"; sha256="1wxcz06gywipyv0cnw8w7f9wccbn90l0h07zspwfd0l0d4rmqh1p"; depends=[BiocGenerics data_table GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; }; - Genominator = derive2 { name="Genominator"; version="1.28.0"; sha256="0aayjr0sw9xqy4y2xyfbmbk7cbc81c5f0kf6fhdiswxl1v5f43l4"; depends=[BiocGenerics DBI GenomeGraphs IRanges RSQLite]; }; - Glimma = derive2 { name="Glimma"; version="1.2.1"; sha256="0gqkm41rsdkgq15b3w2hv3n77kp85sirnypdav7g3lq00r8q69iv"; depends=[DESeq2 edgeR]; }; - GlobalAncova = derive2 { name="GlobalAncova"; version="3.42.0"; sha256="0wxs7l4jx4c54bafvif48c4rlnv5vgl658403j4gp6w2xapbi4dv"; depends=[annotate AnnotationDbi corpcor globaltest]; }; - GoogleGenomics = derive2 { name="GoogleGenomics"; version="1.6.0"; sha256="12jpp6j4pzx5agnshzxa42izxby9iwl5vpaj2c7bh1m07xn35qkg"; depends=[Biostrings GenomeInfoDb GenomicAlignments GenomicRanges httr IRanges rjson Rsamtools S4Vectors VariantAnnotation]; }; - GraphAT = derive2 { name="GraphAT"; version="1.46.0"; sha256="0gynda9y1px750ffgxprs8nlq85gxfkggvg9g0qdwsw32gn5s2nw"; depends=[graph MCMCpack]; }; - GraphAlignment = derive2 { name="GraphAlignment"; version="1.38.0"; sha256="1p6qswivfmapm0qh58r0chp9jqc0yljpx9c405viss36k2sxv7k0"; depends=[]; }; - GraphPAC = derive2 { name="GraphPAC"; version="1.16.0"; sha256="0xmcg6d5v7qzi9kxvgfigxz2zv0fgpsqrvwq3dckvziqpv214dyc"; depends=[igraph iPAC RMallow TSP]; }; - GreyListChIP = derive2 { name="GreyListChIP"; version="1.6.0"; sha256="16rv1z40j4wkhify0xf24afd7f40pmwjm1r1nq5zhrz4im7skc8r"; depends=[BSgenome GenomeInfoDb GenomicAlignments GenomicRanges MASS Rsamtools rtracklayer SummarizedExperiment]; }; - Guitar = derive2 { name="Guitar"; version="1.12.0"; sha256="1mfp56d4wqml5ki5mayq3cd4zidgm0jv1gxl9g04nxp7jzzcm6c1"; depends=[GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges Rsamtools rtracklayer]; }; - Gviz = derive2 { name="Gviz"; version="1.18.2"; sha256="0gdd1h474gyy7g5cwrjzy6dwddblpg9gqnig5gdcbdzl0ll8kpc4"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings biovizBase BSgenome digest GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges lattice latticeExtra matrixStats RColorBrewer Rsamtools rtracklayer S4Vectors XVector]; }; - HCsnip = derive2 { name="HCsnip"; version="1.14.0"; sha256="1vmh1j954pj6xfafcgwc6wfw066clqdggc79360anbr9rlfsmjkw"; depends=[Biobase clusterRepro coin fpc impute randomForestSRC sigaR sm survival]; }; - HDF5Array = derive2 { name="HDF5Array"; version="1.2.1"; sha256="07c4xp9v6rvi2zpg5r504rjp041h438djz4x1d28ryxpmp9sgj1a"; depends=[BiocGenerics IRanges rhdf5 S4Vectors]; }; - HDTD = derive2 { name="HDTD"; version="1.8.0"; sha256="0diq8m2qrv42hknyvhzgjxw17jykxaw1qifpm4k4fidp55dgd9qf"; depends=[]; }; - HELP = derive2 { name="HELP"; version="1.32.0"; sha256="0qypbj5vvv0r75izdarh48y94jc1b0msn7rnhkcqkpqcwpdfxgpl"; depends=[Biobase]; }; - HEM = derive2 { name="HEM"; version="1.46.0"; sha256="0gsqfpg10ywskcn782h7saqqhd8y72x4cxd3z9vhwdz3rkf99maf"; depends=[Biobase]; }; - HIBAG = derive2 { name="HIBAG"; version="1.10.0"; sha256="18dr6y6fw85hip4njzaax9sjr02xbwcicjmrxsdq4g8gx5r0rrsh"; depends=[]; }; - HMMcopy = derive2 { name="HMMcopy"; version="1.16.0"; sha256="1syy98jgim2adchcc4ni1xji3ssixbawqafrkzq68fspsh467yc6"; depends=[geneplotter IRanges]; }; - HTSFilter = derive2 { name="HTSFilter"; version="1.14.1"; sha256="145lbxcv0fqqby9y5fzrijvmm6rhmqr0a6n49n8syq03ibg1pa04"; depends=[Biobase BiocParallel DESeq DESeq2 edgeR]; }; - HTSanalyzeR = derive2 { name="HTSanalyzeR"; version="2.26.0"; sha256="0zh3zlkgiwk1bsxv3j4bwf300531ifpg5hyniwal732zm7xbbiq3"; depends=[AnnotationDbi biomaRt BioNet cellHTS2 graph GSEABase igraph RankProd]; }; - HTSeqGenie = derive2 { name="HTSeqGenie"; version="4.4.0"; sha256="121z3hmpgv3bhg28ns1k570s11gicmsrp4a2y4jndarxrzdi5f7k"; depends=[BiocGenerics BiocParallel Biostrings Cairo chipseq GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gmapR hwriter IRanges Rsamtools rtracklayer S4Vectors ShortRead SummarizedExperiment VariantAnnotation VariantTools]; }; - HTqPCR = derive2 { name="HTqPCR"; version="1.28.0"; sha256="19gfjgf7d2xqb9vr5sg45yp2d0jmqx3s2s2y71wdg48508xf3990"; depends=[affy Biobase gplots limma RColorBrewer]; }; - Harman = derive2 { name="Harman"; version="1.2.0"; sha256="0hdravpr71mp34ix486nx7czrfz9pqg045m4c7rs7d10p0vb76cn"; depends=[Rcpp]; }; - Harshlight = derive2 { name="Harshlight"; version="1.46.0"; sha256="069826gdbb4xzdbizxzfn8z681vvrchk20k8awd7r7n3i01gbz5f"; depends=[affy altcdfenvs Biobase]; }; - Heatplus = derive2 { name="Heatplus"; version="2.20.0"; sha256="0svmlq531jasggndz1n8b6sh97k9pj1i9a0w2k5iz17cpg89w9sp"; depends=[RColorBrewer]; }; - HelloRanges = derive2 { name="HelloRanges"; version="1.0.1"; sha256="11z2d0d98l0wgxd0dicrph6ldrgvdrngibhgkknfshzcs4c6yqkv"; depends=[BiocGenerics Biostrings BSgenome docopt GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; - HiTC = derive2 { name="HiTC"; version="1.18.1"; sha256="0l3a7f4caj2ijd54swjgz9893hy5yn2bv0gp9mjibj5x0hgrwbmf"; depends=[Biostrings GenomeInfoDb GenomicRanges IRanges Matrix RColorBrewer rtracklayer]; }; - HilbertCurve = derive2 { name="HilbertCurve"; version="1.4.0"; sha256="132dn6l3g70wfznwfqg33f7saqn8av2p8nbrbymipavy5jmaki1s"; depends=[circlize GenomicRanges HilbertVis IRanges png]; }; - HilbertVis = derive2 { name="HilbertVis"; version="1.32.0"; sha256="1k2lmvjvzfj73fpfd3ri4ifwvb30kd5k55cssr0cz2fx37rd8hiv"; depends=[lattice]; }; - HilbertVisGUI = derive2 { name="HilbertVisGUI"; version="1.32.0"; sha256="1v0s125k56nmjpmk4352ygyzi0w8is8ispqgyjcgyfhzn4fs46aw"; depends=[HilbertVis]; }; - HybridMTest = derive2 { name="HybridMTest"; version="1.18.0"; sha256="0g62cgmy6g150fhjx2v4xk8mg6c5glz2h6ry89dr8pk5czfxqwcj"; depends=[Biobase fdrtool MASS survival]; }; - IHW = derive2 { name="IHW"; version="1.2.0"; sha256="1m8m7zhj0hwdnb4z93dh918jynp3amnxwv0yl9zflf54nwg0p8y0"; depends=[BiocGenerics fdrtool lpsymphony slam]; }; - IMPCdata = derive2 { name="IMPCdata"; version="1.8.0"; sha256="15gskfs84anw2x902zhldsh8hzfhyrv9vjlb8qplkmd7prskjs48"; depends=[rjson]; }; - INPower = derive2 { name="INPower"; version="1.10.0"; sha256="135xlhcv3h1rkipdy7vp2knr8gqgcfcsadcrl9a477iaps1ljfg1"; depends=[mvtnorm]; }; - INSPEcT = derive2 { name="INSPEcT"; version="1.4.0"; sha256="15bn5x42igdxrj1fg9fzi2rgy1c24nxgwpqxxipqkippr985ybvg"; depends=[Biobase BiocGenerics BiocParallel deSolve GenomicAlignments GenomicFeatures GenomicRanges IRanges preprocessCore pROC rootSolve Rsamtools S4Vectors]; }; - IONiseR = derive2 { name="IONiseR"; version="1.4.4"; sha256="09vv5h8zwwlkc3azw1hb166wbhafdz9q7pd0xxcckwm596sbpnc6"; depends=[BiocGenerics Biostrings data_table dplyr ggplot2 magrittr rhdf5 ShortRead tidyr XVector]; }; - IPO = derive2 { name="IPO"; version="1.0.0"; sha256="05g41kx40n7kv8cc51khg6wql7i8p5h53g873xvccld5vpc8dish"; depends=[CAMERA rsm xcms]; }; - IPPD = derive2 { name="IPPD"; version="1.22.0"; sha256="1p0c5wr7lcarmlchfglmjd7d8r38mm262g8wyj7dljknlbw1p2n1"; depends=[bitops digest MASS Matrix XML]; }; - IRanges = derive2 { name="IRanges"; version="2.8.2"; sha256="0x8h74ik3xwdnwrkn89hq5ll0qa1lp9jgzlbmpa02dpws7snfwyr"; depends=[BiocGenerics S4Vectors]; }; - ISoLDE = derive2 { name="ISoLDE"; version="1.2.0"; sha256="1j9ckl0xq10scrrc0nr7522pz39bd5wapmpkgnlz93rflf90jq3g"; depends=[]; }; - ITALICS = derive2 { name="ITALICS"; version="2.34.0"; sha256="1i4b94wngb6306dq5mx9vnmv69i6pl19c7kwrwmdfiq8hsl47wq1"; depends=[affxparser DBI GLAD ITALICSData oligo oligoClasses pd_mapping50k_xba240]; }; - IVAS = derive2 { name="IVAS"; version="1.6.0"; sha256="04qa9i4jkq3w040y3pzklld5p8v1qirr5vpglj3r8i01mj5r7krf"; depends=[AnnotationDbi BiocGenerics doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges IRanges lme4 Matrix S4Vectors]; }; - Icens = derive2 { name="Icens"; version="1.46.0"; sha256="0mfz0k2p2jsbm1rchylrl2k222p96xjdplnl0zgkhv32747svpv8"; depends=[survival]; }; - IdMappingAnalysis = derive2 { name="IdMappingAnalysis"; version="1.18.0"; sha256="1v98zqp5hyix49rlzvpiv289fsivcs602xi9bfhs15p9z33599qy"; depends=[Biobase boot mclust R_oo rChoiceDialogs RColorBrewer]; }; - IdMappingRetrieval = derive2 { name="IdMappingRetrieval"; version="1.22.0"; sha256="0kvs65qny43q4s0nkm9g8giv4d5qajpr12620208jhwbrm6jpg99"; depends=[AffyCompatible biomaRt ENVISIONQuery R_methodsS3 R_oo rChoiceDialogs RCurl XML]; }; - IdeoViz = derive2 { name="IdeoViz"; version="1.8.0"; sha256="1irxfpdf8i5zx96bw1v9pz5v0lrjb2z5gxzmfyibgivfp6dl9xj6"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges RColorBrewer rtracklayer]; }; - Imetagene = derive2 { name="Imetagene"; version="1.4.0"; sha256="0h80hwa8ksqwbhrwfvqp09yzlfqncrg0s6j48h9p4rhzf8958k6p"; depends=[d3heatmap ggplot2 metagene shiny shinyBS shinyFiles shinythemes]; }; - ImmuneSpaceR = derive2 { name="ImmuneSpaceR"; version="1.2.0"; sha256="1nw7swi6mq2gs8qc8k8psfzfrkxcbdkmc7vz8shsiszxp5idfy8b"; depends=[Biobase data_table ggplot2 gplots gtools pheatmap RCurl reshape2 Rlabkey scales]; }; - ImpulseDE = derive2 { name="ImpulseDE"; version="1.0.0"; sha256="0qaq5gb19zdp4z2vhmn0gm3f1ccc8939nvcmaca34w51g4l1i4c0"; depends=[amap boot]; }; - InPAS = derive2 { name="InPAS"; version="1.6.0"; sha256="1mkp059xzx0r1a3jv59pbwnwwkcg2kyrd2amxblgd27418j3g0mp"; depends=[AnnotationDbi Biobase BiocParallel BSgenome cleanUpdTSeq depmixS4 GenomeInfoDb GenomicFeatures GenomicRanges Gviz IRanges limma preprocessCore S4Vectors seqinr]; }; - InteractionSet = derive2 { name="InteractionSet"; version="1.2.1"; sha256="0ax3qlsvm6zqfgli6dm68d1ip1cr74db8xbhs63mb6l84nni14y5"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges Matrix S4Vectors SummarizedExperiment]; }; - IsoGeneGUI = derive2 { name="IsoGeneGUI"; version="2.10.0"; sha256="17z67xxq9vs80nl69bv4n9932dvwhsvra7k2wyj4gj1mmh11v6gg"; depends=[Biobase ff geneplotter goric Iso IsoGene jpeg multtest ORCME ORIClust orQA RColorBrewer Rcpp relimp tkrplot xlsx]; }; - JunctionSeq = derive2 { name="JunctionSeq"; version="1.4.0"; sha256="1x7ngcyhcyi5aynp2zig24rpkkmc8bc8b5f4zlfvkxq3igh8gyri"; depends=[Biobase BiocGenerics BiocParallel DESeq2 genefilter geneplotter GenomicRanges Hmisc IRanges locfit plotrix S4Vectors statmod stringr SummarizedExperiment]; }; - KCsmart = derive2 { name="KCsmart"; version="2.32.0"; sha256="1ppvnd6rs4bwxjr6qhhz5wd4fx9r3xg2mr0zjs8y7srm3k6k2djl"; depends=[BiocGenerics KernSmooth multtest siggenes]; }; - KEGGREST = derive2 { name="KEGGREST"; version="1.14.1"; sha256="0dcdmbkqxy0d4gg8lqlaflmjljzl9h1p2mlxnmvwgx34vnpx386y"; depends=[Biostrings httr png]; }; - KEGGgraph = derive2 { name="KEGGgraph"; version="1.32.0"; sha256="1r5ib197swfr38ia0g23d78kx0dkgjssjmi5fc18z3nfparhkxdq"; depends=[graph XML]; }; - KEGGlincs = derive2 { name="KEGGlincs"; version="1.0.0"; sha256="0jrfzx0s3xkk19pzm7iffk2cx6njihrclrn3iw2d3zvd015k47l3"; depends=[AnnotationDbi gtools hgu133a_db httr igraph KEGGgraph KEGGREST KOdata org_Hs_eg_db plyr RJSONIO]; }; - KEGGprofile = derive2 { name="KEGGprofile"; version="1.16.0"; sha256="1ir3vma3n9bh8bkym0h5p2s6wbi7cjsvlz99mc34nkzqn0jxm0yl"; depends=[AnnotationDbi biomaRt KEGG_db KEGGREST png TeachingDemos XML]; }; - LBE = derive2 { name="LBE"; version="1.42.0"; sha256="103m1j86mlqrrjzy9w5zms0hksqjbn20jqnrf83fga4z958w32fa"; depends=[]; }; - LEA = derive2 { name="LEA"; version="1.6.0"; sha256="1ckygk393awmd963g7jykmfzcpysgi4d29psc5iqdz0h2cxrczjd"; depends=[]; }; - LINC = derive2 { name="LINC"; version="1.2.0"; sha256="0658n1pqm9ccq0s3al7xiljysfqg06wsr0zn9hqb4bafr7amycnf"; depends=[ape Biobase clusterProfiler DOSE ggplot2 ggtree gridExtra org_Hs_eg_db png Rcpp ReactomePA reshape2 sva]; }; - LMGene = derive2 { name="LMGene"; version="2.30.0"; sha256="07dchmzvdp2m2ky2f0vs32ch7cg2fgibmfwsw0din0rx96q0g3y9"; depends=[affy Biobase multtest survival]; }; - LOBSTAHS = derive2 { name="LOBSTAHS"; version="1.0.0"; sha256="0cbr5124rix2lib3gscx7ci1ir4mj4dy5npmxi506804a27rs6z8"; depends=[CAMERA xcms]; }; - LOLA = derive2 { name="LOLA"; version="1.4.0"; sha256="175k4j4yj3j95gy2h7n3yinqf95l8g2vvhpsqc0j9wrpj0wwqyix"; depends=[BiocGenerics data_table GenomicRanges IRanges S4Vectors]; }; - LPE = derive2 { name="LPE"; version="1.48.0"; sha256="1r86lj75qk9inhslh6m6cvk4d57yqxyxssp85hci3w48axz9gnfg"; depends=[]; }; - LPEadj = derive2 { name="LPEadj"; version="1.34.0"; sha256="0fa4cq3yph30mdlx9wk8k90hwy2plflfz2sahighl0ahx98b7mij"; depends=[LPE]; }; - LVSmiRNA = derive2 { name="LVSmiRNA"; version="1.24.0"; sha256="102r6v36q2m03jfc65l5az4570nf3f30klkhqbsb00w0fqhmyi97"; depends=[affy Biobase BiocGenerics limma MASS quantreg SparseM vsn zlibbioc]; }; - LedPred = derive2 { name="LedPred"; version="1.8.0"; sha256="1hi6y7h7yxw5dgj6aq2z48wf8qaxz9q5qd68m41myicwzgva7b8j"; depends=[akima e1071 ggplot2 irr jsonlite plot3D plyr RCurl ROCR testthat]; }; - Linnorm = derive2 { name="Linnorm"; version="1.2.11"; sha256="07cgs6q6svkf9l9qn41702mzank6v1hm4z3isz9cdxlhz586r4cp"; depends=[amap apcluster ellipse fastcluster fpc ggdendro ggplot2 igraph limma MASS mclust Rcpp RcppArmadillo statmod vegan zoo]; }; - LiquidAssociation = derive2 { name="LiquidAssociation"; version="1.28.0"; sha256="1pwcdy4gp1vhdx6kgcligmr5pha5hx03yf3r0lidskcrzydk4sms"; depends=[Biobase geepack org_Sc_sgd_db yeastCC]; }; - LowMACA = derive2 { name="LowMACA"; version="1.6.0"; sha256="07lgl3hcgdiin1r7ws5g7s0jw371v6qlzici0myjz9hw8p9p8gwf"; depends=[BiocParallel Biostrings cgdsr data_table LowMACAAnnotation motifStack RColorBrewer reshape2 stringr]; }; - LymphoSeq = derive2 { name="LymphoSeq"; version="1.2.0"; sha256="0mi82fgkl9bn9x9mhx4zw8cg0acmqsmw22v824xd2ik6c3q017pv"; depends=[circlize data_table dplyr ggplot2 ineq LymphoSeqDB plyr RColorBrewer reshape VennDiagram]; }; - M3D = derive2 { name="M3D"; version="1.8.2"; sha256="06hxxvbk2jpbsyksvl7blll70hg2qb1kg44yv0vaa4a12cq8a1k1"; depends=[BiocGenerics BiSeq GenomicRanges IRanges Rcpp S4Vectors SummarizedExperiment]; }; - M3Drop = derive2 { name="M3Drop"; version="1.0.0"; sha256="0adfklx4nzsy2xvz2gngqlyda4a0avdj3yal9brdk27826s2hyqf"; depends=[bbmle gplots numDeriv RColorBrewer statmod]; }; - MADSEQ = derive2 { name="MADSEQ"; version="1.0.0"; sha256="1m4mfrijyin27v0wxvv9p5i6zxiwkc0hmsriccs58qq9x4zi52ik"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 coda GenomeInfoDb GenomicAlignments GenomicRanges IRanges preprocessCore rjags Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation VGAM zlibbioc]; }; - MAIT = derive2 { name="MAIT"; version="1.8.0"; sha256="085yih04ah4rbbzcchr6qvb69bbvbwsxbfmzd8wfvjdg9r6z3j8v"; depends=[agricolae CAMERA caret class e1071 gplots MASS pls plsgenomics Rcpp xcms]; }; - MANOR = derive2 { name="MANOR"; version="1.46.0"; sha256="101rdapxpvjd383mykx1l6n3h3xvh6z1q60mxwbndwfl429fypy9"; depends=[GLAD]; }; - MAST = derive2 { name="MAST"; version="1.0.5"; sha256="1462b82alj0lbjl1zpfq8i2h3zxj38r82dvanyipg4m468ynmws7"; depends=[abind Biobase BiocGenerics data_table ggplot2 plyr reshape2 S4Vectors stringr SummarizedExperiment]; }; - MBASED = derive2 { name="MBASED"; version="1.8.0"; sha256="0isvf0n0zy7q5vhixnijrmyhdb0zpn74ddqdczgp3j93ripnb04q"; depends=[BiocGenerics BiocParallel GenomicRanges RUnit SummarizedExperiment]; }; - MBAmethyl = derive2 { name="MBAmethyl"; version="1.8.0"; sha256="0l3crgq2i263wq5l91dzbj472bp0y4khlxklikfir1793sgzhwi7"; depends=[]; }; - MBCB = derive2 { name="MBCB"; version="1.28.0"; sha256="0n6f61w5dq1hz80s434zzn78nipi75jn8zwaisgi77kb5k2xrss9"; depends=[preprocessCore tcltk2]; }; - MBttest = derive2 { name="MBttest"; version="1.2.0"; sha256="12yqdgw3wzmzvvfdvf8lb5lyif4cpchdk21ik2k7r7qsvfwkcqnd"; depends=[gplots gtools]; }; - MCRestimate = derive2 { name="MCRestimate"; version="2.30.0"; sha256="0sc3grx8l97cdwxvjvbmb7a3hnqbi1f9lqd4a12n2zcwcv6xr8ly"; depends=[Biobase e1071 golubEsets pamr randomForest RColorBrewer]; }; - MEAL = derive2 { name="MEAL"; version="1.4.2"; sha256="05gk7gs70i36xw4sxzrwlcdkbr9bprqgg0hlqwcynyl3x816s3qr"; depends=[Biobase BiocGenerics DMRcate doParallel GenomicRanges ggplot2 IRanges limma minfi MultiDataSet permute S4Vectors SNPassoc snpStats sva vegan]; }; - MEDIPS = derive2 { name="MEDIPS"; version="1.24.0"; sha256="1gincnn8ay83rzdm3rgd8h9fgg7s1j8i8s22pn1rp073pph582yf"; depends=[biomaRt Biostrings BSgenome DNAcopy edgeR GenomicRanges gtools IRanges preprocessCore Rsamtools rtracklayer]; }; - MEDME = derive2 { name="MEDME"; version="1.34.0"; sha256="1zrxd0bqayxbbgmpqj77lij58a4szsr3y064mmn4manhmij3hbml"; depends=[Biostrings drc MASS]; }; - MEIGOR = derive2 { name="MEIGOR"; version="1.8.0"; sha256="0m4g0np2f5yab1h1j8swfhkgnl1s2a0xw5cvbg7l5pbmzs2fkxa1"; depends=[CNORode deSolve Rsolnp snowfall]; }; - MGFM = derive2 { name="MGFM"; version="1.8.0"; sha256="0i05pcgk5axjr1piwm5g6wb7zh4hwya1zbvvrfr4v8rwilsyq27z"; depends=[annotate AnnotationDbi]; }; - MGFR = derive2 { name="MGFR"; version="1.0.0"; sha256="0qbmndrvn19h8vnx2qhcpa175hvid1vlnzzi9177x73naj2lyyv3"; depends=[annotate biomaRt]; }; - MIMOSA = derive2 { name="MIMOSA"; version="1.12.0"; sha256="0nzl95cnhf9d38v8gaxy2hlqgxbzzllvh71k5sa335zfr0p1lzr8"; depends=[Biobase coda data_table Formula ggplot2 Kmisc MASS MCMCpack modeest plyr pracma Rcpp RcppArmadillo reshape scales testthat]; }; - MLInterfaces = derive2 { name="MLInterfaces"; version="1.54.0"; sha256="1fg8l1digl14ijr53bwarbqwcaj5374vmqdkvy5jfg2s06iwdkym"; depends=[annotate Biobase BiocGenerics cluster fpc gbm gdata genefilter ggvis hwriter MASS mlbench pls RColorBrewer rda rpart sfsmisc shiny threejs]; }; - MLP = derive2 { name="MLP"; version="1.22.0"; sha256="0awiqvhzzvgqmacks3yxl4a6savc39dv6brf8m0lz9rcl6cgzsza"; depends=[affy AnnotationDbi gdata gmodels gplots gtools plotrix]; }; - MLSeq = derive2 { name="MLSeq"; version="1.14.1"; sha256="1wdh4rpsfnv1nzypgqm4y9c4vzv9z8snrb0nh2s9ssbcc7cwkpl7"; depends=[Biobase caret DESeq2 edgeR limma randomForest]; }; - MMDiff2 = derive2 { name="MMDiff2"; version="1.2.0"; sha256="1zy8whabpqbl1cfhh6bjax97snyy6pqfd8dqa7w21s6y4wg9krzd"; depends=[Biobase Biostrings BSgenome GenomicRanges ggplot2 locfit RColorBrewer Rsamtools S4Vectors shiny]; }; - MODA = derive2 { name="MODA"; version="1.0.0"; sha256="1fh26d0gfisif8v1ms321mj08202kfqngvghpg1xzr28cp59h9c8"; depends=[dynamicTreeCut igraph WGCNA]; }; - MPFE = derive2 { name="MPFE"; version="1.10.0"; sha256="1d2b3mhcjxvdq99iqj96gygq9bivg95n2n7jxscy3gdkzpf70336"; depends=[]; }; - MSGFgui = derive2 { name="MSGFgui"; version="1.8.0"; sha256="0g8pygqqxb4g5hh47n9jwikim8hakrbppn85ydzq4hvrsjysjdxz"; depends=[MSGFplus mzID mzR shiny shinyFiles xlsx]; }; - MSGFplus = derive2 { name="MSGFplus"; version="1.8.0"; sha256="104h4f0jnhswn4sbr5r1ivd7g1r4gdrrjj3a0kd7p3ckl542vwcq"; depends=[mzID]; }; - MSnID = derive2 { name="MSnID"; version="1.8.0"; sha256="0fkk3za39cxi0jyxmagmycjdslr2xf6vg3ylz14jyffqi0blw9d5"; depends=[Biobase data_table doParallel dplyr foreach iterators MSnbase mzID mzR ProtGenerics R_cache Rcpp reshape2]; }; - MSnbase = derive2 { name="MSnbase"; version="2.0.2"; sha256="0jjjs29dcwsjaxzfqxy98ycpg3rwxzzchkj77my3cjgdc00sm66n"; depends=[affy Biobase BiocGenerics BiocParallel digest ggplot2 impute IRanges lattice MALDIquant mzID mzR pcaMethods plyr preprocessCore ProtGenerics Rcpp reshape2 S4Vectors vsn XML]; }; - MSstats = derive2 { name="MSstats"; version="3.6.0"; sha256="1p9000y7ca94vingg1gdd6sdxy3p0njqdinxhy3raf4gb4hmnv7y"; depends=[data_table ggplot2 ggrepel gplots limma lme4 marray minpack_lm MSnbase preprocessCore Rcpp reshape reshape2 survival]; }; - MVCClass = derive2 { name="MVCClass"; version="1.48.0"; sha256="1jd2vh63j4jj0q4x05drrwfkn7qddxq96403ambkavcxcxs3z0x7"; depends=[]; }; - MantelCorr = derive2 { name="MantelCorr"; version="1.44.0"; sha256="1r1lb71mw7fqlmfai7d2lbij3n9pjpvvng8lx0fpbzaxghrbcd37"; depends=[]; }; - MassArray = derive2 { name="MassArray"; version="1.26.0"; sha256="152wy0h3zrfqyf444m7mcp6gvnx4q10ahj5nziwdp26k7zjm4jx9"; depends=[]; }; - MassSpecWavelet = derive2 { name="MassSpecWavelet"; version="1.40.0"; sha256="0c734mvynmyir7pcfy8igvvxk8y3hvcpkazsjljykfjvjs47x49p"; depends=[waveslim]; }; - MatrixRider = derive2 { name="MatrixRider"; version="1.6.0"; sha256="0khdgn3kcj1mw5z8d2cz781n56myqgxalycg9317dap6r2hng11x"; depends=[Biostrings IRanges S4Vectors TFBSTools XVector]; }; - MeSHDbi = derive2 { name="MeSHDbi"; version="1.10.0"; sha256="1jyz50q4svakq8ckwnrfyc568ryhg3jxl920v7s477nxj2854pa1"; depends=[AnnotationDbi Biobase BiocGenerics RSQLite]; }; - MeSHSim = derive2 { name="MeSHSim"; version="1.6.0"; sha256="1ab92abmyw469v4gzk6ki95j5m9ivdwr7v74hgh8jr5zw674gfzp"; depends=[RCurl XML]; }; - MeasurementError_cor = derive2 { name="MeasurementError.cor"; version="1.46.0"; sha256="046yc0bvqxxh5x83zy7qq6b5cyhzkcg78bgyzz9w7lb7sim0h491"; depends=[]; }; - MergeMaid = derive2 { name="MergeMaid"; version="2.46.0"; sha256="07ann5kkbp0kz2cplks934yy20ixnqjz1fnhd292lbsq493www1x"; depends=[Biobase MASS survival]; }; - Mergeomics = derive2 { name="Mergeomics"; version="1.2.0"; sha256="187w71dr1brjz6fhdlxxvanipn9rmkyfrp5ij943y3jca0iibbij"; depends=[]; }; - MetCirc = derive2 { name="MetCirc"; version="1.0.1"; sha256="09mw5nqvp5pj8dma7fqdiiw5qqxm3m51s2r4ji3shiliq961bkw4"; depends=[amap circlize scales shiny]; }; - Metab = derive2 { name="Metab"; version="1.8.0"; sha256="1kb41ld1fxggmwa4chzpwnfy6473jhs79386k0py9i7z9myaf7pj"; depends=[pander svDialogs xcms]; }; - MetaboSignal = derive2 { name="MetaboSignal"; version="1.4.0"; sha256="08j76zdkzg42j3x1h5dzw7qkx44fcj7bwigrv452s6frkanhb5ij"; depends=[AnnotationDbi biomaRt hpar igraph KEGGgraph KEGGREST mygene org_Hs_eg_db RCurl]; }; - MethPed = derive2 { name="MethPed"; version="1.2.0"; sha256="0phja8mf6vi913kjypbyx25j9bgqj25iis4jz1y7hbafvy3vx4x8"; depends=[Biobase randomForest]; }; - MethTargetedNGS = derive2 { name="MethTargetedNGS"; version="1.6.0"; sha256="15vbqsci33fbcz94va64w53qnzx4hqzv2ss4myhy9kavk4h5ma07"; depends=[Biostrings gplots seqinr stringr]; }; - MethylAid = derive2 { name="MethylAid"; version="1.8.0"; sha256="0c2y6r72ypgc9rjyk4779l0s3x3wpdm88ygab5zdfi9sgy108r4x"; depends=[Biobase BiocGenerics BiocParallel ggplot2 gridBase hexbin matrixStats minfi RColorBrewer shiny]; }; - MethylMix = derive2 { name="MethylMix"; version="2.0.0"; sha256="06zq28ns2h2l6zlrwhgrf80ac679fq3qbrlcn0rshwz2vwbk6xha"; depends=[data_table digest foreach ggplot2 impute limma R_matlab RColorBrewer RCurl RPMM]; }; - MethylSeekR = derive2 { name="MethylSeekR"; version="1.14.0"; sha256="06kixgxrla3rvxf6xsg4r4yxi9qld6kx82p9xv2x978qsx717frr"; depends=[BSgenome geneplotter GenomicRanges IRanges mhsmm rtracklayer]; }; - Mfuzz = derive2 { name="Mfuzz"; version="2.34.0"; sha256="1bzi6kwpbkr8g4zqxw517grl2sc4pq6ph4m4vb4hmn6x6qxlijlr"; depends=[Biobase e1071 tkWidgets]; }; - MiChip = derive2 { name="MiChip"; version="1.28.0"; sha256="0lxdcmfy1gpfpmnagg2649dbq9rj13rggv43n79l2f033awbpsp8"; depends=[Biobase]; }; - MiPP = derive2 { name="MiPP"; version="1.46.0"; sha256="1280c04222l2hbapbw7k6rnsi8hrbpd0w49gvx50sl0mkl3zq5gh"; depends=[Biobase e1071 MASS]; }; - MiRaGE = derive2 { name="MiRaGE"; version="1.16.0"; sha256="17ys0qwz8y4ka81ynzp46fcy5qi6mw7y7vsffqvgnsf587bdj9ia"; depends=[AnnotationDbi Biobase BiocGenerics S4Vectors]; }; - MineICA = derive2 { name="MineICA"; version="1.14.0"; sha256="0si7l560d14vhz4k8p0c1fqmr85f91zcfz3vh0fbnyg3m4rh8yz2"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt cluster colorspace fastICA foreach fpc ggplot2 GOstats graph gtools Hmisc igraph JADE lumi lumiHumanAll_db marray mclust plyr RColorBrewer Rgraphviz scales xtable]; }; - MinimumDistance = derive2 { name="MinimumDistance"; version="1.18.0"; sha256="1zl8ravn0dpb6ca3f9k92p7wdhz7afjy7cx28nx0hv71aqk1q5i8"; depends=[Biobase BiocGenerics data_table DNAcopy ff foreach GenomeInfoDb GenomicRanges IRanges lattice matrixStats oligoClasses S4Vectors SummarizedExperiment VanillaICE]; }; - Mirsynergy = derive2 { name="Mirsynergy"; version="1.10.0"; sha256="1w98swg02n1gfk1cgjvzi09wwymn8v6v3gjlm58sgj0j47h8l4c6"; depends=[ggplot2 gridExtra igraph Matrix RColorBrewer reshape scales]; }; - MmPalateMiRNA = derive2 { name="MmPalateMiRNA"; version="1.24.0"; sha256="1g6wlk8qlszc42jqrdlwa340p69h7fk7nmdrk0k0rdl1mmjsmcs9"; depends=[Biobase lattice limma statmod vsn xtable]; }; - MoPS = derive2 { name="MoPS"; version="1.8.0"; sha256="1z0m6c61sp6cljaibskrk8xywpkgx4m3d2s8rdq3hs99x6w1f200"; depends=[Biobase]; }; - MoonlightR = derive2 { name="MoonlightR"; version="1.0.0"; sha256="10r0vnyig561d5hrvhbb3srr6v1lndgjxabj03adhmn7nbv4iija"; depends=[Biobase circlize clusterProfiler doParallel DOSE foreach GEOquery gplots HiveR limma parmigene randomForest RColorBrewer RISmed SummarizedExperiment TCGAbiolinks]; }; - MotIV = derive2 { name="MotIV"; version="1.30.0"; sha256="1zq22llziicgfsh9ykf8blf9593h4yw3nhr58alvvp5hjjh2pz3r"; depends=[BiocGenerics Biostrings IRanges lattice rGADEM S4Vectors]; }; - MotifDb = derive2 { name="MotifDb"; version="1.16.1"; sha256="105a320znvrdkwvsixv1ddaiax1ay87wr4675pv4j79xdjh7by2z"; depends=[BiocGenerics Biostrings IRanges rtracklayer S4Vectors]; }; - Mulcom = derive2 { name="Mulcom"; version="1.24.0"; sha256="0mlmb9lk71676dz45812ni72vbid2hv2v9b1i437dr69qnppm126"; depends=[Biobase fields]; }; - MultiAssayExperiment = derive2 { name="MultiAssayExperiment"; version="1.0.1"; sha256="0vq7xfw3wv7i07v57qz2b3v599mfp27p6fxadlsqjql9v5jy6kk6"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors shiny shinydashboard SummarizedExperiment]; }; - MultiDataSet = derive2 { name="MultiDataSet"; version="1.2.0"; sha256="04hrqi8x2fsfnpyk344kfrvfl66mv1lx3kdqs7ga9wnfq98b82b2"; depends=[Biobase BiocGenerics GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IRanges minfi S4Vectors SummarizedExperiment]; }; - MultiMed = derive2 { name="MultiMed"; version="1.8.0"; sha256="1185flg1grb14m00km2v6z4ypl5lh6p4p05wsxq231g255aljq64"; depends=[]; }; - MutationalPatterns = derive2 { name="MutationalPatterns"; version="1.0.0"; sha256="1a3c2bm0xx0q4gf98jiw74msmdf2fr8rbsdysd5ww9kqlzmsbr17"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges NMF plyr pracma reshape2 SummarizedExperiment VariantAnnotation]; }; - NCIgraph = derive2 { name="NCIgraph"; version="1.22.0"; sha256="1dbbnlbbjqvmb8adppkacl7qrxic4gavvcmh0cafpvsm3ybs4zvb"; depends=[graph KEGGgraph R_methodsS3 RBGL RCytoscape]; }; - NGScopy = derive2 { name="NGScopy"; version="1.8.0"; sha256="0hc103pa3qbd6pd4578wdrczd4sljhb408lclkjlv3abdc6x7247"; depends=[changepoint rbamtools Xmisc]; }; - NOISeq = derive2 { name="NOISeq"; version="2.18.0"; sha256="0iw4zy01a0lk6n60q4kw3jmgha41dxchidzg9rbsbsci3ysnl3h5"; depends=[Biobase Matrix]; }; - NTW = derive2 { name="NTW"; version="1.24.0"; sha256="0cqc8rgkx9gqhkc62csyws7c23nf94pwigiq5myirgamga314cqb"; depends=[mvtnorm]; }; - NanoStringDiff = derive2 { name="NanoStringDiff"; version="1.4.0"; sha256="06zln140q6r00mhi820hzgw5zincr1kg56h3387iikyw4hyq53s2"; depends=[Biobase matrixStats]; }; - NanoStringQCPro = derive2 { name="NanoStringQCPro"; version="1.6.0"; sha256="0848h8dmbk0gj4w0p77bi6byqil76ggaikqqdxflyzv39zkw28sc"; depends=[AnnotationDbi Biobase knitr NMF org_Hs_eg_db png RColorBrewer]; }; - NarrowPeaks = derive2 { name="NarrowPeaks"; version="1.18.0"; sha256="02g8rbqaddcy4w9i2ma0xmzdb84bykba3p3zmv1lylh77knmxdrw"; depends=[BiocGenerics CSAR fda GenomeInfoDb GenomicRanges ICSNP IRanges S4Vectors]; }; - NetPathMiner = derive2 { name="NetPathMiner"; version="1.10.0"; sha256="0ssbmp0qkvnvii646zj2qiwzrn8cyi6jvg7h937vbr6vnzv643cg"; depends=[igraph]; }; - NetSAM = derive2 { name="NetSAM"; version="1.14.0"; sha256="1jzlpnnry9lbnfvrks5fz14nwkvg3r8pp8f5lw63izg0fx1m5ypm"; depends=[graph igraph seriation]; }; - NormqPCR = derive2 { name="NormqPCR"; version="1.20.0"; sha256="1qik5gvzvj4zzfllj5p9cryfwq8z33jziv6p5gyfndyn5b9p2sq6"; depends=[Biobase qpcR RColorBrewer ReadqPCR]; }; - NuPoP = derive2 { name="NuPoP"; version="1.24.0"; sha256="1aqw86yn9pq1901qzqjvjw9sfqpnnqn29pagdrxqd6858x034w6n"; depends=[]; }; - OCplus = derive2 { name="OCplus"; version="1.48.2"; sha256="04drljh5m46v9gpvfgwgajq9kn1ycb7fhbxxk6j4xq89ddlz1dk7"; depends=[akima multtest]; }; - OGSA = derive2 { name="OGSA"; version="1.4.0"; sha256="0i2w0g4310sg1zy4z7bc9ajr4yizf313bpzwgzjngx51hsyjk9ws"; depends=[Biobase gplots limma]; }; - OLIN = derive2 { name="OLIN"; version="1.52.0"; sha256="1q0p8jry2nw3w1a4zan0kwgc87nk2v2psnw00m5m6m0a1j9drryd"; depends=[limma locfit marray]; }; - OLINgui = derive2 { name="OLINgui"; version="1.48.0"; sha256="168bbsacsj74ah84zbfi7h2bpnz7zclbykl9rwaic8gr4ymgz1qw"; depends=[marray OLIN tkWidgets widgetTools]; }; - OSAT = derive2 { name="OSAT"; version="1.22.0"; sha256="0f4lz86g8205hbbdka50a6s1gbdb19zqjna4gwakb4w3ni53gqhg"; depends=[]; }; - OTUbase = derive2 { name="OTUbase"; version="1.24.0"; sha256="0xxha9f2f2qfzb8cv4m59grbyv011w9f27zm3cq64affgzwnb5r2"; depends=[Biobase Biostrings IRanges S4Vectors ShortRead vegan]; }; - OmicCircos = derive2 { name="OmicCircos"; version="1.12.0"; sha256="0q6ngrf5cyy6hyvhhhrx6ldbij7b051fgdsknm7qb4xzbsk5i75k"; depends=[GenomicRanges]; }; - OmicsMarkeR = derive2 { name="OmicsMarkeR"; version="1.8.1"; sha256="0y38441v5lnj25w3qw5d4f6bijf3c9jzxp57jjhhj12vxqmrdajy"; depends=[assertive assertive_base caret caTools data_table DiscriMiner e1071 foreach gbm glmnet pamr permute plyr randomForest]; }; - OncoScore = derive2 { name="OncoScore"; version="1.2.1"; sha256="1f8nx3p8dik5b8yvpn7pvk5iy5vyy5fjgy49d3czkfwp1dzis49d"; depends=[biomaRt]; }; - OncoSimulR = derive2 { name="OncoSimulR"; version="2.4.0"; sha256="0a1m54x14f6rz9sz9m1kwlxl8xl3vlxqz3iq5qrs8n36crqbx3nj"; depends=[car data_table dplyr ggplot2 ggrepel graph gtools igraph RColorBrewer Rcpp Rgraphviz smatr]; }; - OperaMate = derive2 { name="OperaMate"; version="1.6.0"; sha256="152qxkf4qnkjj4grk0jsysh80daybgw6ywwm1h8l6lk64q0dhl6w"; depends=[fBasics ggplot2 gProfileR gridExtra pheatmap reshape2 stabledist]; }; - OrderedList = derive2 { name="OrderedList"; version="1.46.0"; sha256="1wfpypaimvzisv032irbsmk766zxq1xqh8q0qn9ipqp9hrp7mrlb"; depends=[Biobase twilight]; }; - OrganismDbi = derive2 { name="OrganismDbi"; version="1.16.0"; sha256="0pj1qfz015203dkkik49i00jlvbbzh1p4lz2jgpk2iqx8n0yx923"; depends=[AnnotationDbi Biobase BiocGenerics BiocInstaller GenomicFeatures GenomicRanges graph IRanges RBGL RSQLite S4Vectors]; }; - Oscope = derive2 { name="Oscope"; version="1.4.0"; sha256="1cxmz482wlqvkcz9x3riwn01kz5flyzyg41ygs0flkjml64dp7hj"; depends=[BiocParallel cluster EBSeq testthat]; }; - OutlierD = derive2 { name="OutlierD"; version="1.38.0"; sha256="10lwi35l9iv2hx7hra43i0b6n1r853rdzcbwir4m34iijjxjx9db"; depends=[Biobase quantreg]; }; - PAA = derive2 { name="PAA"; version="1.8.0"; sha256="0kv6mxczp0mwmhyqlq2qxzzhzapl2ijmr6063aw6klsh03q1n73m"; depends=[e1071 gplots gtools limma MASS mRMRe randomForest Rcpp ROCR sva]; }; - PADOG = derive2 { name="PADOG"; version="1.16.0"; sha256="0f0rl44sclmbcqfsw086nalhzxrjc04yml89xwgnjny4f5kh7sri"; depends=[AnnotationDbi Biobase doRNG foreach GSA hgu133a_db hgu133plus2_db KEGG_db KEGGdzPathwaysGEO limma nlme]; }; - PANR = derive2 { name="PANR"; version="1.20.0"; sha256="0ml99gy3fi55qqj6k9hbs5hwvf51344k0anwx30hnpk1xsxvcjy0"; depends=[igraph MASS pvclust RedeR]; }; - PAPi = derive2 { name="PAPi"; version="1.14.0"; sha256="18mnm303ryyz912m6yqnc2fbdhkin1v45jb55dxaplpzh57hmsxg"; depends=[KEGGREST svDialogs]; }; - PAnnBuilder = derive2 { name="PAnnBuilder"; version="1.38.0"; sha256="0sws413s9gy9zkaj007wbbgkk8ghh38kzr28kmpjwviga09142zr"; depends=[AnnotationDbi Biobase DBI RSQLite]; }; - PCAN = derive2 { name="PCAN"; version="1.2.1"; sha256="07yhqzvvmhldlvg7d2zg3shwlhnpm381rwrbfcrazhf2bgysd9kd"; depends=[BiocParallel]; }; - PCpheno = derive2 { name="PCpheno"; version="1.36.0"; sha256="08pxms6hs82ngjh7vcjqh7m5jchznss4i7izm37dwxp1nmy83bhy"; depends=[annotate AnnotationDbi Biobase Category GO_db graph GSEABase KEGG_db ppiData ppiStats ScISI SLGI]; }; - PECA = derive2 { name="PECA"; version="1.10.0"; sha256="1g91z0ywbm7ck9bi9a2v75hx98hvxvi1b6h8wlzv6gjjsv2z849a"; depends=[affy aroma_affymetrix aroma_core genefilter limma preprocessCore ROTS]; }; - PGA = derive2 { name="PGA"; version="1.4.0"; sha256="12fwd2c7psp5ffmi7z81a33ynjg0khikccp5qjyin76bvnqxx7sw"; depends=[AnnotationDbi biomaRt Biostrings customProDB data_table GenomicFeatures GenomicRanges ggplot2 IRanges Nozzle_R1 pheatmap RCurl Rsamtools RSQLite rTANDEM rtracklayer S4Vectors stringr VariantAnnotation]; }; - PGSEA = derive2 { name="PGSEA"; version="1.48.0"; sha256="0yn1ayvf6g8g3w5lakp3224qm3h2h984zii7n7cqnzl8gciwxyb4"; depends=[annaffy AnnotationDbi Biobase GO_db KEGG_db]; }; - PICS = derive2 { name="PICS"; version="2.18.0"; sha256="1vzsrmyk4l19z0a7i9gzmrymks3jh2c8rfib6g7kn9z5pwbw56l1"; depends=[BiocGenerics GenomicAlignments GenomicRanges IRanges Rsamtools S4Vectors]; }; - PING = derive2 { name="PING"; version="2.18.0"; sha256="0rlx8dasj51xnj3nwvx4sjia7di9q3sawmz5zhp6a2kfacgss0lc"; depends=[BiocGenerics BSgenome chipseq fda GenomicRanges Gviz IRanges PICS S4Vectors]; }; - PLPE = derive2 { name="PLPE"; version="1.34.0"; sha256="1d2m9xxhvmgjn92dv1i8x7yzam377hzj6ibb3d4rmqmbjs446cdk"; depends=[Biobase LPE MASS]; }; - PREDA = derive2 { name="PREDA"; version="1.20.0"; sha256="07477ps2whj4h0ph5kdjra4x6jlc0xyii2yp338jhgrhdnpxwjqx"; depends=[annotate Biobase lokern multtest]; }; - PROMISE = derive2 { name="PROMISE"; version="1.26.0"; sha256="1ybgzw043fm0lzayq4ddqwgr6j5bd3a0r73aica5bg8hzr5x1pll"; depends=[Biobase GSEABase]; }; - PROPER = derive2 { name="PROPER"; version="1.6.0"; sha256="15xqwbn098vv0h8f0cz8nzxb5swf83idb2gd25k1vzh4nv34vr4m"; depends=[edgeR]; }; - PROcess = derive2 { name="PROcess"; version="1.50.0"; sha256="1l0kbd0b2xarw7wc4mkvyb0ixkky7slqd3w5r41isppa4wanvvjn"; depends=[Icens]; }; - PSEA = derive2 { name="PSEA"; version="1.8.0"; sha256="0rkf4w35xgkwa2mc5h65nf5kc61cv1p3xmyz0pg0cim8q50y5wsh"; depends=[Biobase MASS]; }; - PSICQUIC = derive2 { name="PSICQUIC"; version="1.12.1"; sha256="1948cs1ygx16kj9kj1ip2l7k2za51zkknc1sm2n51zhl7ywk9dnv"; depends=[BiocGenerics biomaRt httr IRanges plyr RCurl]; }; - PWMEnrich = derive2 { name="PWMEnrich"; version="4.10.0"; sha256="152vkwaabwsyrgh2hdkp63gac418k4yl1iwvli45ax6cv2mb1c81"; depends=[BiocGenerics Biostrings evd gdata seqLogo]; }; - PanVizGenerator = derive2 { name="PanVizGenerator"; version="1.2.0"; sha256="09x527v5iwhnn4gn52xlk40553lzcgfwrmrc2qn9kv791rf7k743"; depends=[FindMyFriends igraph jsonlite pcaMethods shiny]; }; - Path2PPI = derive2 { name="Path2PPI"; version="1.4.0"; sha256="0y3pz6sdrv0szi068w78kdpksxqa6dqjg3vy5sqdvj0y4sr0ss0w"; depends=[igraph]; }; - PathNet = derive2 { name="PathNet"; version="1.14.0"; sha256="1hj9k43sb9vjryphma140g1fmqnrgj2dkcy11b0dksd9mdlldwvg"; depends=[]; }; - PathoStat = derive2 { name="PathoStat"; version="1.0.0"; sha256="01vn24q4l7rbwksbdk0srac2rr352912bmr0brdjjfh3y9v26j8p"; depends=[alluvial ape BatchQC BiocStyle corpcor dplyr DT ggplot2 gtools knitr limma matrixStats MCMCpack pander phyloseq plyr rentrez reshape2 rmarkdown scales shiny tidyr XML]; }; - Pbase = derive2 { name="Pbase"; version="0.14.0"; sha256="0r42974jfylqf51i00n9b1axzmqb3kv9idj6p4dz5hq223r18x1j"; depends=[Biobase BiocGenerics biomaRt Biostrings cleaver GenomicRanges Gviz IRanges MSnbase mzID mzR Pviz Rcpp rtracklayer S4Vectors]; }; - PharmacoGx = derive2 { name="PharmacoGx"; version="1.4.3"; sha256="1cfly0xfd7sgiv65kmmb3899glvzzypb8za9prv569d7h6vz9yq8"; depends=[Biobase caTools downloader lsa magicaxis piano RColorBrewer]; }; - PhenStat = derive2 { name="PhenStat"; version="2.8.0"; sha256="1cmpkv11s55ackgdvqmhidijznnvy1xpfhqdw3h0b11vrwi17d1a"; depends=[car logistf MASS nlme nortest]; }; - Pi = derive2 { name="Pi"; version="1.2.1"; sha256="0b79qf119n3737n1bifnc3qb36jsyh4c9h76svqy1rpkh68pairi"; depends=[dnet GenomeInfoDb GenomicRanges ggbio ggplot2 ggrepel igraph MASS Matrix randomForest ROCR scales supraHex XGR]; }; - Pigengene = derive2 { name="Pigengene"; version="1.0.0"; sha256="16s46alh0vm31crn3dzsf91k53v3j2hgn0rqzm1wvyw61y05la26"; depends=[bnlearn C50 GO_db graph impute MASS matrixStats partykit pheatmap preprocessCore Rgraphviz WGCNA]; }; - Polyfit = derive2 { name="Polyfit"; version="1.8.0"; sha256="0r87xv86mivdgyifvp9snmxswsyvmsif4zkzp24wycypza7wr3l3"; depends=[DESeq]; }; - Prize = derive2 { name="Prize"; version="1.5.1"; sha256="11rzkwrkq329g2a6wzbk9yxbjza2qihdxk9l35fd39vmdw6ykfr5"; depends=[diagram ggplot2 gplots matrixcalc reshape2 stringr]; }; - ProCoNA = derive2 { name="ProCoNA"; version="1.12.0"; sha256="0k7nb2cq1xn64m96wjvn5g18kbpigslcf99hyv03ib7r790h32qy"; depends=[BiocGenerics flashClust GOstats MSnbase WGCNA]; }; - Prostar = derive2 { name="Prostar"; version="1.6.1"; sha256="1gj9d425wxk57rf0qk8m9k9xxgmv02wbwjg1h4nl9q7c23vmxsbg"; depends=[DAPAR DAPARdata data_table DT rhandsontable shiny shinyAce shinyjs sm]; }; - ProtGenerics = derive2 { name="ProtGenerics"; version="1.6.0"; sha256="0hb3vrrvfx6lcfalmjxm8dmigfmi5nba0pzjfgsrzd35c8mbfc6f"; depends=[]; }; - ProteomicsAnnotationHubData = derive2 { name="ProteomicsAnnotationHubData"; version="1.4.0"; sha256="0iwcsnv05g83plsb8wdgpa9lzp136pfl7qyp3yqik1fn62s32fj4"; depends=[AnnotationHub AnnotationHubData Biobase BiocInstaller Biostrings GenomeInfoDb MSnbase mzR RCurl]; }; - PureCN = derive2 { name="PureCN"; version="1.2.3"; sha256="0h3w3d1dnr8ng0cg54jp02v1v6zhn8csrli9cpbszjgrn9dfxybx"; depends=[Biostrings data_table DNAcopy GenomeInfoDb GenomicRanges IRanges RColorBrewer Rsamtools S4Vectors SummarizedExperiment VariantAnnotation]; }; - Pviz = derive2 { name="Pviz"; version="1.8.0"; sha256="1m2s37bzlxkih4c868wq3n8y3mg161laxh5p1789k3w32nlli89c"; depends=[Biostrings biovizBase data_table GenomicRanges Gviz IRanges]; }; - QDNAseq = derive2 { name="QDNAseq"; version="1.10.0"; sha256="0pa9r9pndk2viv7xcy961c26vx2afpc4rr7dl5zihsgb4y2az8vc"; depends=[Biobase CGHbase CGHcall DNAcopy GenomicRanges IRanges matrixStats R_utils Rsamtools]; }; - QUALIFIER = derive2 { name="QUALIFIER"; version="1.18.0"; sha256="06aamgjl3bay76wdjzqfkwcmj9bwkvbrgv542zwqppv059an9wxf"; depends=[Biobase data_table flowCore flowViz flowWorkspace hwriter lattice latticeExtra MASS ncdfFlow reshape XML]; }; - QUBIC = derive2 { name="QUBIC"; version="1.2.1"; sha256="15mqx8aqhk7hhhlingri1l27dydfv3vaqjvjmpa4lh7a0p9ac2rg"; depends=[biclust Matrix Rcpp RcppArmadillo]; }; - QuartPAC = derive2 { name="QuartPAC"; version="1.6.0"; sha256="0mh2rzh3cp0n0ky133iiy1zgv1q90ilqspi4l8r5d3mqi2bs056n"; depends=[data_table GraphPAC iPAC SpacePAC]; }; - QuasR = derive2 { name="QuasR"; version="1.14.0"; sha256="1330vlvsfypr0pl7arawks4d80yjk2afn637ivcnbhrchkmicfdv"; depends=[Biobase BiocGenerics BiocInstaller BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges IRanges Rbowtie Rsamtools rtracklayer S4Vectors ShortRead zlibbioc]; }; - QuaternaryProd = derive2 { name="QuaternaryProd"; version="1.2.0"; sha256="0bnnh4p7ifj9kpx29x2scy7qshnbnwr9a2bzyi5npqss6nd68fpy"; depends=[Rcpp]; }; - R3CPET = derive2 { name="R3CPET"; version="1.6.0"; sha256="1f345ci24ff1fj5i509ar8900gf4850cc88b0h7w0wm14k76s6dk"; depends=[BiocGenerics clues clValid data_table GenomeInfoDb GenomicRanges ggbio ggplot2 Hmisc igraph IRanges pheatmap Rcpp RCurl reshape2 S4Vectors]; }; - R453Plus1Toolbox = derive2 { name="R453Plus1Toolbox"; version="1.24.0"; sha256="02s8rxcv1k41v2nzrpzhbh7l7hhyp94k61cic35kvbd84xs8bwvl"; depends=[Biobase BiocGenerics biomaRt Biostrings BSgenome GenomicRanges IRanges R2HTML Rsamtools S4Vectors ShortRead SummarizedExperiment TeachingDemos VariantAnnotation xtable XVector]; }; - R4RNA = derive2 { name="R4RNA"; version="1.2.0"; sha256="0hl5khn72nid1f9863nl8wyh98xgj2zx3yp0bf7q5ja5559kqnj7"; depends=[Biostrings]; }; - RBGL = derive2 { name="RBGL"; version="1.50.0"; sha256="1q14m8w6ih56v680kf3d9wh1qbgp7af33kz3cxafdf1vvzx9km08"; depends=[graph]; }; - RBM = derive2 { name="RBM"; version="1.6.0"; sha256="0h0qzn1hp5g167z5r5p9b445v8nqmvzg3ixyj709zh66y93nqcwx"; depends=[limma marray]; }; - RBioinf = derive2 { name="RBioinf"; version="1.34.0"; sha256="1q20v3h2zxxa5i655fdd6zyn3glga52mpq0dpmdrlx4yxb4pw3ms"; depends=[graph]; }; - RCAS = derive2 { name="RCAS"; version="1.0.2"; sha256="0rim13lnh1pc5ks33x1pa63mlrn64fmmpwy7d10ypplrvn7sq75a"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings BSgenome_Hsapiens_UCSC_hg19 data_table DT genomation GenomeInfoDb GenomicFeatures GenomicRanges knitr motifRG org_Hs_eg_db plotly rmarkdown rtracklayer S4Vectors topGO]; }; - RCASPAR = derive2 { name="RCASPAR"; version="1.20.0"; sha256="070j74bsjg3rq6bhi201r1vajcim8kzf99hpjcswq358q070ghbl"; depends=[]; }; - RCy3 = derive2 { name="RCy3"; version="1.5.2"; sha256="1jkjg6byb5rwny0q77xmsc2gnppxcym59rcdn5kpgvd33l7jwnbn"; depends=[graph httr RCurl RJSONIO]; }; - RCyjs = derive2 { name="RCyjs"; version="1.6.0"; sha256="1dh16hhm32hhk4nb12kw17gxpsg6513grvddialxhjzi21j2y698"; depends=[BiocGenerics BrowserViz graph httpuv igraph jsonlite Rcpp]; }; - RCytoscape = derive2 { name="RCytoscape"; version="1.24.1"; sha256="1al8w3nz19abxxsnifgzb9myciacws79z2i2ffx29yvfhcsk2z7s"; depends=[BiocGenerics graph]; }; - RDAVIDWebService = derive2 { name="RDAVIDWebService"; version="1.12.0"; sha256="1320ky26p0zq90qb5x2ysbzrz3ipcp04jz74r11qzivxzb1hzkrl"; depends=[Category ggplot2 GO_db GOstats graph RBGL rJava]; }; - RDRToolbox = derive2 { name="RDRToolbox"; version="1.24.0"; sha256="1z0p6wi6l0lg8y4ffi5mnlm6hxlv3rx2wrlvzdqrv7pbg6vnv2m2"; depends=[MASS rgl]; }; - REDseq = derive2 { name="REDseq"; version="1.20.0"; sha256="0wfmqanrjmrnj7prxvci3m5qaw8y8qqml6jwnbjn42b7qk57l8n6"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome BSgenome_Celegans_UCSC_ce2 ChIPpeakAnno IRanges multtest]; }; - RGSEA = derive2 { name="RGSEA"; version="1.8.0"; sha256="1fqlvshy4yp17v1cvjvgyiv23zcccrqs7l6mvapb2cs1q67bfhhx"; depends=[BiocGenerics]; }; - RGalaxy = derive2 { name="RGalaxy"; version="1.18.0"; sha256="13r07fhas3bqmblydrc1h7r2sz1knc082iay5n8zi94x7bb5vx8b"; depends=[Biobase BiocGenerics digest optparse roxygen2 XML]; }; - RGraph2js = derive2 { name="RGraph2js"; version="1.2.0"; sha256="0shkmaxsdj078vk2h3n80cfmibxnz50mlr55hbi6vf3awj81iy1x"; depends=[digest graph rjson whisker]; }; - RIPSeeker = derive2 { name="RIPSeeker"; version="1.14.0"; sha256="1yvn9d4psifkipv1mp42qi5h09a5023cbf7mhw6nmyqpkcw4bwjd"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; - RImmPort = derive2 { name="RImmPort"; version="1.2.0"; sha256="0pl2zd9y2skhxp1clnv0y7dyi4ib2pj5a6rbq9f0nqjcwqc251h0"; depends=[data_table DBI dplyr plyr reshape2 RSQLite sqldf]; }; - RLMM = derive2 { name="RLMM"; version="1.36.0"; sha256="0h7k448ajdpvqbq5vi0lx38sc581hv74224fi0grdrk9s56n3993"; depends=[MASS]; }; - RMassBank = derive2 { name="RMassBank"; version="2.2.1"; sha256="1jkn5y8bwic6nmcd9jhs8i5kfwmldxfylapassrmzjbfg7jil4gm"; depends=[Biobase digest MSnbase mzR rcdk Rcpp RCurl rjson S4Vectors XML yaml]; }; - RNASeqPower = derive2 { name="RNASeqPower"; version="1.14.0"; sha256="1yzd5z1dbav72w1df0z93810ym09hbmghwikkv7b8y0b2blkigcy"; depends=[]; }; - RNAinteract = derive2 { name="RNAinteract"; version="1.22.0"; sha256="0nlz20hwyrycya82wdkaj962q1zpgncf4sjawiczz7wagll61rsm"; depends=[abind Biobase cellHTS2 geneplotter gplots hwriter ICS ICSNP lattice latticeExtra limma locfit RColorBrewer splots]; }; - RNAither = derive2 { name="RNAither"; version="2.22.0"; sha256="0saq1yichxgr12wcb2d6xd5qixxisk992drza82gv31c1sq8i5vx"; depends=[biomaRt car geneplotter limma prada RankProd splots topGO]; }; - RNAprobR = derive2 { name="RNAprobR"; version="1.6.0"; sha256="1j6mrih9aqcy3d9xh05aj1p3a39ivnj0k6i482ax1l4cq7gvna7x"; depends=[BiocGenerics Biostrings GenomicAlignments GenomicFeatures GenomicRanges plyr Rsamtools rtracklayer]; }; - ROC = derive2 { name="ROC"; version="1.50.0"; sha256="0bm9vp0viyjr4xcar2b5dl0fbpy9fmnkrg0hzvhillrlh0xzzhwk"; depends=[]; }; - ROTS = derive2 { name="ROTS"; version="1.2.0"; sha256="1grfw0bxb5fv4sy9xbwa8ydppr6g77qw8q9rminjnfqdafpqkakk"; depends=[Biobase Rcpp]; }; - ROntoTools = derive2 { name="ROntoTools"; version="2.2.0"; sha256="0lq5al7g4r58wc0byyj2a49m9dcj1llcys9hdwlns1ahzvw6d76h"; depends=[boot graph KEGGgraph KEGGREST Rgraphviz]; }; - RPA = derive2 { name="RPA"; version="1.30.0"; sha256="0dq6g94jb6zam5fb667finkdn6mavvi5dnxws4dgvjw1qrlwg7vl"; depends=[affy BiocGenerics phyloseq]; }; - RRHO = derive2 { name="RRHO"; version="1.14.0"; sha256="0iwg3hjxc9avm8mysrx0ix03ncwik0iikph9j6jgd7y7dczq3y1j"; depends=[VennDiagram]; }; - RSVSim = derive2 { name="RSVSim"; version="1.14.0"; sha256="123fly20prx0g8bjbgqwfwrh73xjrq4xbl45rsp9q84kgi6w07i3"; depends=[Biostrings GenomicRanges IRanges ShortRead]; }; - RTCA = derive2 { name="RTCA"; version="1.26.0"; sha256="07kb4zh14g2lvqyicmig29wn50i4sz8bcxg4vq74019al2xj7fsv"; depends=[Biobase gtools RColorBrewer]; }; - RTCGA = derive2 { name="RTCGA"; version="1.4.0"; sha256="0y8d0y043n0ragn1saz0rw5lbx6g04ara7iggn4df5w5xzg6rm08"; depends=[assertthat data_table dplyr ggplot2 ggthemes knitr purrr rvest scales stringi survival survminer viridis XML xml2]; }; - RTCGAToolbox = derive2 { name="RTCGAToolbox"; version="2.4.0"; sha256="16p872nl9470f7yksdy73n5kwn4mlgsfjkndjg50z59sbbhc7h68"; depends=[data_table limma RCircos RCurl RJSONIO survival XML]; }; - RTN = derive2 { name="RTN"; version="1.12.0"; sha256="19rsyr07hq17jah063w74dck9c0yjn6s2i73afawbdjpcqzcrz1n"; depends=[car data_table ff igraph IRanges limma minet RedeR snow]; }; - RTopper = derive2 { name="RTopper"; version="1.20.0"; sha256="11vqgq594z3di5pa89irrnaiynxmi332g6d35za0glhpba3bj5bz"; depends=[Biobase limma multtest]; }; - RUVSeq = derive2 { name="RUVSeq"; version="1.8.0"; sha256="043dmg1ggfvkn8vjaz4k9qvkjrc4ncm4p74iarh02mk0pzx5m9f9"; depends=[Biobase EDASeq edgeR MASS]; }; - RUVcorr = derive2 { name="RUVcorr"; version="1.6.0"; sha256="13c9l874qlikk5qi8qbfdy9q749xsknf9rl7pz46n03j74afad86"; depends=[BiocParallel bladderbatch corrplot gridExtra lattice MASS psych reshape2 snowfall]; }; - RUVnormalize = derive2 { name="RUVnormalize"; version="1.8.0"; sha256="1hsw0y9s2890z6vim5xjp95p3gdxcy1x2paw276rrgwbz1xda1p1"; depends=[Biobase RUVnormalizeData]; }; - RamiGO = derive2 { name="RamiGO"; version="1.20.0"; sha256="0a61368vzjljqwk3zvd92fb8h6hgr1baiww28531kqadjf83f8nr"; depends=[graph gsubfn igraph png RCurl RCytoscape]; }; - RankProd = derive2 { name="RankProd"; version="3.0.0"; sha256="02k3977y55qph3jx86q4s4dkhndfsbcqq2xgk4xn1nglr64z4azv"; depends=[gmp Rmpfr]; }; - RareVariantVis = derive2 { name="RareVariantVis"; version="1.8.0"; sha256="1irnj6331sr6387k922x6548pk7727vwlzy15awjxcrqlzi5jmim"; depends=[BiocGenerics GenomeInfoDb GenomicRanges googleVis IRanges S4Vectors VariantAnnotation]; }; - Rariant = derive2 { name="Rariant"; version="1.10.0"; sha256="1sl9wxdkhac2s5sp93mavpxdmif6pkmki95xm1ci8rhms7jg66xr"; depends=[dplyr exomeCopy GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges reshape2 Rsamtools S4Vectors shiny SomaticSignatures VariantAnnotation VGAM]; }; - RbcBook1 = derive2 { name="RbcBook1"; version="1.42.0"; sha256="1plcslp68xmr0727wj9v82yyc7lf4n76ixnh6k9lnrrs1ayzz2i9"; depends=[Biobase graph rpart]; }; - Rbowtie = derive2 { name="Rbowtie"; version="1.14.0"; sha256="11sl03ljkq7hkm6ilw91bh4p2lz6iw35xn0f5fyh37i0j5nrmikh"; depends=[]; }; - Rcade = derive2 { name="Rcade"; version="1.16.0"; sha256="05jg13qmrg11d9gkm76d2c3drlzk5l7ld7c57f5fysakg49qbxsd"; depends=[baySeq GenomeInfoDb GenomicAlignments GenomicRanges IRanges plotrix rgl Rsamtools S4Vectors]; }; - Rchemcpp = derive2 { name="Rchemcpp"; version="2.12.0"; sha256="140hwsb7b0cdps5vzjjv4hjcli58g1mkbapxkd8692hjd6ncvpsj"; depends=[ChemmineR Rcpp]; }; - RchyOptimyx = derive2 { name="RchyOptimyx"; version="2.14.0"; sha256="0w4gzcml89ww8br6xqc903ygbkmzfl5xq13k4lngcbis7b7xmxpj"; depends=[flowType graph Rgraphviz sfsmisc]; }; - Rcpi = derive2 { name="Rcpi"; version="1.10.6"; sha256="0cqy9fr1dg85fwgkilyflwarqs0dp98xrx78xzysh0nckwbqj6mz"; depends=[Biostrings ChemmineR doParallel fmcsR foreach GOSemSim rcdk RCurl rjson]; }; - Rdisop = derive2 { name="Rdisop"; version="1.34.0"; sha256="0fvwv7mm771wa86by3clbrx9sh7hflp1kmcyjj3xnbilwyyglvsg"; depends=[Rcpp RcppClassic]; }; - ReQON = derive2 { name="ReQON"; version="1.20.0"; sha256="1bg7y50zh6zd6v8pmvzdzpd51nazl7ymdx57ydc5ngai372g6s0j"; depends=[rJava Rsamtools seqbias]; }; - ReactomePA = derive2 { name="ReactomePA"; version="1.18.1"; sha256="033cq1pjd03h543abz35mz6vdcxk9ai879b2f8jxppbrmhyi3jij"; depends=[AnnotationDbi DOSE graphite igraph reactome_db]; }; - ReadqPCR = derive2 { name="ReadqPCR"; version="1.20.0"; sha256="0rh42d2wskcmwx81266gb9npgl2gcfxsslz2drd74yvr19vc9wg2"; depends=[affy Biobase]; }; - RedeR = derive2 { name="RedeR"; version="1.22.0"; sha256="0si80xqv3sgyjflrc4h8sq4babcd5pqr2h87a3vbmiry9daw6q2d"; depends=[igraph pvclust RCurl XML]; }; - RefNet = derive2 { name="RefNet"; version="1.10.1"; sha256="0ssb5lhzqwgn9zahhnyk3cqbqdk0qv46819iclz2zd3na6qpkg27"; depends=[AnnotationHub BiocGenerics IRanges PSICQUIC RCurl shiny]; }; - RefPlus = derive2 { name="RefPlus"; version="1.44.0"; sha256="0zai3s27xlqjjwvz4da5mq67yll4a4l8a6jyps6m9f6dw1q2c5jl"; depends=[affy affyPLM Biobase preprocessCore]; }; - Repitools = derive2 { name="Repitools"; version="1.20.0"; sha256="05y2y7v768mir3r8c53w1qm9dhpy46fqbyhwakpjaiha1h8y6gxn"; depends=[aroma_affymetrix BiocGenerics Biostrings BSgenome cluster DNAcopy edgeR GenomeInfoDb GenomicAlignments GenomicRanges gplots gsmoothr IRanges MASS Ringo Rsamtools Rsolnp rtracklayer S4Vectors]; }; - ReportingTools = derive2 { name="ReportingTools"; version="2.14.0"; sha256="02q90prc115wbhk1851gsbv4xxd39xzbav9c9vck6qirbiangj5g"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category DESeq2 edgeR ggbio ggplot2 GOstats GSEABase hwriter IRanges knitr lattice limma PFAM_db R_utils XML]; }; - Rgraphviz = derive2 { name="Rgraphviz"; version="2.18.0"; sha256="08brd7cmhxmbv43cf3pq0282fwyxc6hmx3y5dr7filzdb0qs8ja1"; depends=[graph]; }; - Rhtslib = derive2 { name="Rhtslib"; version="1.6.0"; sha256="1vk3ng61dhi3pbia1lp3gl3mlr3i1vb2lkq83qb53i9dzz128wh9"; depends=[zlibbioc]; }; - RiboProfiling = derive2 { name="RiboProfiling"; version="1.4.1"; sha256="19ndx2xdvj57r9wsz9ym3ywilib18cbpm4dswzrhdgjliw73kdjs"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr reshape2 Rsamtools rtracklayer S4Vectors sqldf]; }; - Ringo = derive2 { name="Ringo"; version="1.38.0"; sha256="0c6h7lm6aqs7y57w2h36g4yr7wl2h9yrp60vv4128bdxgjqkv539"; depends=[Biobase BiocGenerics genefilter lattice limma Matrix RColorBrewer vsn]; }; - Risa = derive2 { name="Risa"; version="1.16.0"; sha256="1iix9nrn0p7vvv138qxdnz9aqcicrd97hn1sfgm8n46dcn5ghmqy"; depends=[affy Biobase biocViews Rcpp xcms]; }; - Rmagpie = derive2 { name="Rmagpie"; version="1.30.0"; sha256="00bv93d861finxi38pqbrypjiz1hsazzjrbihy4q5sfy2162xpa5"; depends=[Biobase e1071 kernlab pamr]; }; - RmiR = derive2 { name="RmiR"; version="1.30.0"; sha256="0j0h6ififbdbc4k99k0fq5pvaig4dm0gndzbglqrl2xl77ykhpyr"; depends=[DBI RmiR_Hs_miRNA RSVGTipsDevice]; }; - RnBeads = derive2 { name="RnBeads"; version="1.6.1"; sha256="1kjxxbhm9f519sbldmklp7nizf71wq6vbnhkad23y4j05ywlywmf"; depends=[BiocGenerics cluster ff fields GenomicRanges ggplot2 gplots gridExtra illuminaio IRanges limma MASS matrixStats methylumi plyr RColorBrewer S4Vectors]; }; - RnaSeqSampleSize = derive2 { name="RnaSeqSampleSize"; version="1.6.0"; sha256="1lyvhkli4xdhshh53dg2xl9cyy11913zm3pnfpbfha1b0cl5w7d6"; depends=[biomaRt edgeR heatmap3 KEGGREST matlab Rcpp RnaSeqSampleSizeData]; }; - Rnits = derive2 { name="Rnits"; version="1.8.0"; sha256="0dna0gv4f4ws0xwx5ikaqvn9x01yzln1ihrdc5886bnwmlrxwqm7"; depends=[affy Biobase boot ggplot2 impute limma qvalue reshape2]; }; - Roleswitch = derive2 { name="Roleswitch"; version="1.12.0"; sha256="13db86wfzw6bixjxk77d0syzazvy11x5khij2yda5py45cc6q042"; depends=[Biobase biomaRt Biostrings DBI microRNA plotrix pracma reshape]; }; - RpsiXML = derive2 { name="RpsiXML"; version="2.16.0"; sha256="14wlw9cmjr6iv6zydw4l7bfg9dicgb3zk7qfnrlqd9060kgqbfv2"; depends=[annotate AnnotationDbi Biobase graph hypergraph RBGL XML]; }; - Rqc = derive2 { name="Rqc"; version="1.8.0"; sha256="1h3fqmkifr2bdcql161dssfbabkn4x5wg753wbg1j9lfsgn2zp96"; depends=[BiocGenerics BiocParallel BiocStyle Biostrings biovizBase digest GenomicAlignments GenomicFiles ggplot2 IRanges knitr markdown plyr Rcpp reshape2 Rsamtools S4Vectors shiny ShortRead]; }; - Rsamtools = derive2 { name="Rsamtools"; version="1.26.2"; sha256="118nsajgghi4cy3h0wi7777kc70a5j1fdyxv5n1dy01glix2z4qk"; depends=[BiocGenerics BiocParallel Biostrings bitops GenomeInfoDb GenomicRanges IRanges S4Vectors XVector zlibbioc]; }; - Rsubread = derive2 { name="Rsubread"; version="1.24.2"; sha256="14v255j1n01gl1s0d13rag6m4nmpc2gg636hy4mn505bnvqp147y"; depends=[]; }; - Rtreemix = derive2 { name="Rtreemix"; version="1.36.0"; sha256="18a6pf517an68n5bxxrnql2qzm5jmmi0k3zaqg3n6zkmfz6izm48"; depends=[Biobase graph Hmisc]; }; - S4Vectors = derive2 { name="S4Vectors"; version="0.12.2"; sha256="0syx0qgipx97zsp3b8afhzamsr30835a2a99yb9wnq7b50g3v3p1"; depends=[BiocGenerics]; }; - SAGx = derive2 { name="SAGx"; version="1.48.0"; sha256="1sy7r5nnp9lq8r9217zfy8g5vzjcsh4raiwd06dk4qgshqwd091b"; depends=[Biobase multtest]; }; - SANTA = derive2 { name="SANTA"; version="2.12.0"; sha256="19xrjv25y780jlgl0fw0hlvwdnnjkr6ql769y86qnmj5ipqmgici"; depends=[igraph Matrix snow]; }; - SBMLR = derive2 { name="SBMLR"; version="1.70.0"; sha256="0g1wzx18sac73mwn1v1jgvdx8kbbc2ijrc8nq45h64hg00w66zys"; depends=[deSolve XML]; }; - SC3 = derive2 { name="SC3"; version="1.3.18"; sha256="1nqrzwgb55353q9gf4lky55sda6vggq5rfnmfs0g66vld6ghs6ag"; depends=[cluster doParallel doRNG e1071 foreach ggplot2 pheatmap Rcpp RcppArmadillo robustbase ROCR rrcov scater shiny WriteXLS]; }; - SCAN_UPC = derive2 { name="SCAN.UPC"; version="2.16.0"; sha256="04pfbmhnn6y842i7hd210qqqdkk1q2x25y34x6bnxvfvs5adg4nm"; depends=[affy affyio Biobase Biostrings foreach GEOquery IRanges MASS oligo sva]; }; - SELEX = derive2 { name="SELEX"; version="1.6.0"; sha256="0j8jqfxynh22r1b4cb2l0chq93i8r5izf40bfbmyxcyw56hbp9y7"; depends=[Biostrings rJava]; }; - SEPA = derive2 { name="SEPA"; version="1.4.0"; sha256="0qrlirs7y6b4f86n9xzk29c1mpq32rjzmz22rl3dgqfanm0rhazy"; depends=[ggplot2 org_Hs_eg_db org_Mm_eg_db reshape2 segmented shiny topGO]; }; - SGSeq = derive2 { name="SGSeq"; version="1.8.1"; sha256="13rv6dwf7bmd2asd16kg3cvpw3zfbnx4z8xh3sficzr409r4xj5v"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges igraph IRanges Rsamtools rtracklayer RUnit S4Vectors SummarizedExperiment]; }; - SICtools = derive2 { name="SICtools"; version="1.4.0"; sha256="14crfai0zy3yc74g755hvxpm0r942k6a38sgx399bybxwnlbqdd7"; depends=[Biostrings doParallel GenomicRanges IRanges matrixStats plyr Rsamtools stringr]; }; - SIM = derive2 { name="SIM"; version="1.44.0"; sha256="1f37dc843ir2jy9998gmniydc8ypqnmp68f975vkyqicbzfplh83"; depends=[globaltest quantreg quantsmooth]; }; - SIMAT = derive2 { name="SIMAT"; version="1.6.1"; sha256="14masfdaqbsfwi1yh9cqb2cs4b47a3sy159iig5ahlbc4x9mkmvq"; depends=[ggplot2 mzR Rcpp reshape2]; }; - SIMLR = derive2 { name="SIMLR"; version="1.0.1"; sha256="1r5yzjmjgv1lvw4b4863zs6h54614shp2bvic439wdaqr8pcq6dk"; depends=[Matrix]; }; - SISPA = derive2 { name="SISPA"; version="1.4.0"; sha256="1rfk3gyz5h1qz333cjim6952h01x15gl067jil6i4kislkpjlza7"; depends=[changepoint data_table genefilter ggplot2 GSVA plyr]; }; - SLGI = derive2 { name="SLGI"; version="1.34.0"; sha256="0080vwdh43i61xsii3kr517z24606dg1l412q0pg4z68p57cqrg1"; depends=[AnnotationDbi Biobase BiocGenerics GO_db lattice ScISI]; }; - SLqPCR = derive2 { name="SLqPCR"; version="1.40.0"; sha256="1zqdmq461mcz0ic9m5l4y12jmp5vf4b6w19icj2l18s9ndb2b12v"; depends=[]; }; - SMAP = derive2 { name="SMAP"; version="1.38.0"; sha256="0qpllwng8xgx6vfg8a6vrz2353b45xhbmv8vqx81z4b0jh1knbav"; depends=[]; }; - SMITE = derive2 { name="SMITE"; version="1.2.0"; sha256="1xqidcmr1p1nmmrhpdhbclxzfqcs33l1q8zpqs2qcbpx4svvjafb"; depends=[AnnotationDbi Biobase BioNet geneLenDataBase GenomicRanges ggplot2 goseq Hmisc igraph IRanges KEGG_db org_Hs_eg_db plyr reactome_db S4Vectors scales]; }; - SNAGEE = derive2 { name="SNAGEE"; version="1.14.0"; sha256="1qpvqxwh14iqw5w9sx366ri9h5q3fbq2cvk0brhsq9hslccb480m"; depends=[SNAGEEdata]; }; - SNPRelate = derive2 { name="SNPRelate"; version="1.8.0"; sha256="07ml3kwpz272q40k4qynj5farwr17lwarwclsd642s2vg0xandd6"; depends=[gdsfmt]; }; - SNPchip = derive2 { name="SNPchip"; version="2.20.0"; sha256="036k1la7ji9fgni0mgrz3bivkh2r66xzqd3q0hys4hr6bg7xrywi"; depends=[Biobase foreach GenomeInfoDb GenomicRanges IRanges lattice oligoClasses S4Vectors SummarizedExperiment]; }; - SNPediaR = derive2 { name="SNPediaR"; version="1.0.0"; sha256="0cbw37jdmv9bvaclvnj3wyn4r05bbyab6gr0q5gapkzz7zvg8rj1"; depends=[jsonlite RCurl]; }; - SNPhood = derive2 { name="SNPhood"; version="1.4.1"; sha256="17miqrv6v0n6nlrn8rkblqzsf6vk5gspmban8drbjc0j13fjpmli"; depends=[BiocGenerics BiocParallel Biostrings checkmate cluster data_table DESeq2 GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges lattice RColorBrewer reshape2 Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; }; - SPEM = derive2 { name="SPEM"; version="1.14.0"; sha256="1pik7sd9gg9hq3yapvc046cjcm6braq2q6nfbc2fv360xsm43ahm"; depends=[Biobase Rsolnp]; }; - SPIA = derive2 { name="SPIA"; version="2.26.0"; sha256="0z5d3bdzixams0nv6z3yr6c8cgymv2wzbnkvg6r1xfi86mrqh0s0"; depends=[KEGGgraph]; }; - SPLINTER = derive2 { name="SPLINTER"; version="1.0.0"; sha256="0w8082mnb8zkbkrp09hcwvn7y63y9p26slx2hvjxh07zw2h2k73c"; depends=[biomaRt Biostrings BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 Gviz IRanges plyr S4Vectors seqLogo]; }; - SQUADD = derive2 { name="SQUADD"; version="1.24.0"; sha256="1l7rkmqw571wjwcr2wh3d2q652jpcba2hgf8nfbhc1h7da0yz5n5"; depends=[RColorBrewer]; }; - SRAdb = derive2 { name="SRAdb"; version="1.32.0"; sha256="168ijnvv3yhh9j5wbp5m4bqns63dhnmqm108pjdfwxjm2ya0dvra"; depends=[GEOquery graph RCurl RSQLite]; }; - SRGnet = derive2 { name="SRGnet"; version="1.0.0"; sha256="02y7w06j6qjvf49k8a4k03djahv934h4npj18hj10a4941d8ixfn"; depends=[DMwR EBcoexpress gbm gRain igraph limma MASS matrixStats pvclust RedeR]; }; - SSPA = derive2 { name="SSPA"; version="2.14.0"; sha256="0l95hws5c4gb8c1jsqpnwc3010gx9l8yi132svxa6wbms73qpfy2"; depends=[lattice limma qvalue]; }; - STAN = derive2 { name="STAN"; version="2.2.0"; sha256="0z5b22rqyk15gpqhlafq15gaa5h9cs0v1pm64j12qww41nrd6sz0"; depends=[BiocGenerics GenomeInfoDb GenomicRanges Gviz IRanges poilog Rsolnp S4Vectors]; }; - STATegRa = derive2 { name="STATegRa"; version="1.8.0"; sha256="1qn3gdz23a23i1mm006z1s58j8ky5ik3zy67bc6ji6yv0pqcdmah"; depends=[affy Biobase calibrate edgeR foreach ggplot2 gplots gridExtra limma MASS]; }; - STRINGdb = derive2 { name="STRINGdb"; version="1.14.0"; sha256="17mliwk1cd67bd485j5g8wp1ch8z4mvap44ikvxa4pv51jqrqvh0"; depends=[gplots hash igraph plotrix plyr png RColorBrewer RCurl sqldf]; }; - SVAPLSseq = derive2 { name="SVAPLSseq"; version="1.0.0"; sha256="17f0a3h82yh9lsanq17prkrbs094bc4kgj9vy6hjk0ivlh0mb0wm"; depends=[edgeR ggplot2 limma lmtest pls SummarizedExperiment]; }; - SVM2CRM = derive2 { name="SVM2CRM"; version="1.6.0"; sha256="02k95x5ifdbnr2jwkppq94q5xbpfxvix8dnqfnjjzxni2qqgwzs3"; depends=[AnnotationDbi GenomicRanges IRanges LiblineaR mclust pls ROCR rtracklayer squash SVM2CRMdata verification zoo]; }; - SWATH2stats = derive2 { name="SWATH2stats"; version="1.4.1"; sha256="0jnryq56yjnp7blp9hiw45w03k7g7bb08frxqv98a2zz93vqrcxd"; depends=[data_table ggplot2 reshape2]; }; - SamSPECTRAL = derive2 { name="SamSPECTRAL"; version="1.28.0"; sha256="08yyvidwzn3ijj0p339nbd94ix4f96141sa1y175cv13rfpcapdw"; depends=[]; }; - ScISI = derive2 { name="ScISI"; version="1.46.0"; sha256="0hrm72dkn8xn5ipw7q1vixybxhc5w13d1g42k6g7ds94mgm4y7lk"; depends=[annotate AnnotationDbi apComplex GO_db org_Sc_sgd_db RpsiXML]; }; - SemDist = derive2 { name="SemDist"; version="1.8.0"; sha256="1a7f3md15a5fb9s483wz2mhhi99jhmbix9vwa44rnkd3c6xahvyz"; depends=[annotate AnnotationDbi GO_db]; }; - SeqArray = derive2 { name="SeqArray"; version="1.14.1"; sha256="05s7iq3pbn3cpfqr5jvk4fxmvqcgray1d0yvk1j2d2fs6jmdsj97"; depends=[Biostrings gdsfmt GenomeInfoDb GenomicRanges IRanges S4Vectors SummarizedExperiment VariantAnnotation]; }; - SeqGSEA = derive2 { name="SeqGSEA"; version="1.14.0"; sha256="03g7pzhw7xz7iwac9d8lw1z0d5hxz982b65ydjwnfq87psssklx4"; depends=[Biobase biomaRt DESeq doParallel]; }; - SeqVarTools = derive2 { name="SeqVarTools"; version="1.12.0"; sha256="1y9bdprh3iw8m5mcys5w6cvi4msh5m2291mnh81gchypk4wmpcgi"; depends=[Biobase gdsfmt GenomicRanges GWASExactHW IRanges logistf S4Vectors SeqArray stringr VariantAnnotation]; }; - ShortRead = derive2 { name="ShortRead"; version="1.32.1"; sha256="1m7lbfxs7xwcy9xs76zy5rky2mb96anvh457xfw60lh3kygwfpxc"; depends=[Biobase BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges hwriter IRanges lattice latticeExtra Rsamtools S4Vectors XVector zlibbioc]; }; - SigCheck = derive2 { name="SigCheck"; version="2.6.0"; sha256="0ddq2q47g6anz3y3p25p5vp2nkr4ib3slyd1z5q86gaa6rja9zsv"; depends=[Biobase BiocParallel e1071 MLInterfaces survival]; }; - SigFuge = derive2 { name="SigFuge"; version="1.12.0"; sha256="0cqdzpim9la30fdcn2kk1jb8yj27hx22szlmj86jadv21wrjspwz"; depends=[GenomicRanges ggplot2 matlab reshape sigclust]; }; - SimBindProfiles = derive2 { name="SimBindProfiles"; version="1.12.0"; sha256="02rcz4h0agqm4xp5p6w3i7ssyjj9l52hg9rzp2pig854nmbyyhay"; depends=[Biobase limma mclust Ringo]; }; - SomaticSignatures = derive2 { name="SomaticSignatures"; version="2.10.0"; sha256="14y7ija2c1qby4gb4p9jm1dgn6d1175nlm1cwpvisi8nrri3bfzq"; depends=[Biobase Biostrings GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges NMF pcaMethods proxy reshape2 S4Vectors VariantAnnotation]; }; - SpacePAC = derive2 { name="SpacePAC"; version="1.12.0"; sha256="0xawxv7a59b9w4ggn2ifgwbmxslwp9f4cvkx1mafllj8m9wg8m2q"; depends=[iPAC]; }; - SpeCond = derive2 { name="SpeCond"; version="1.28.0"; sha256="1paj6xpab9gv77fa5p6ndddsc0w9wqd59xkyvaarwka4c74i3983"; depends=[Biobase fields hwriter mclust RColorBrewer]; }; - SpidermiR = derive2 { name="SpidermiR"; version="1.4.8"; sha256="1nqakgccxz5112sfj89jw5mc530kxw5lspsrnhma3sb5ivv89291"; depends=[AnnotationDbi ggplot2 gplots gridExtra httr igraph lattice latticeExtra miRNAtap miRNAtap_db networkD3 org_Hs_eg_db TCGAbiolinks visNetwork]; }; - SplicingGraphs = derive2 { name="SplicingGraphs"; version="1.14.0"; sha256="00cgvkh5g16i2kbdlhafpjwfszcki7g5ipl7lpkrvrzk3f9701h7"; depends=[BiocGenerics GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph igraph IRanges Rgraphviz Rsamtools S4Vectors]; }; - StarBioTrek = derive2 { name="StarBioTrek"; version="1.0.3"; sha256="0al6l12msrgh6hv73xhqvsqnm1yyvkv34g23dazwf52lxm3qvlkn"; depends=[AnnotationDbi e1071 igraph KEGGREST org_Hs_eg_db ROCR SpidermiR]; }; - Starr = derive2 { name="Starr"; version="1.30.0"; sha256="1wq7166k8incddgivrvijyzq7xd65bwl7rlqxc4c34g7fwzmh0hc"; depends=[affxparser affy MASS pspline Ringo zlibbioc]; }; - Streamer = derive2 { name="Streamer"; version="1.20.0"; sha256="00vi6wh4gq6x5yrvqs2gxmy0nbcjdhiwxzi1v2v99ax11p69h37m"; depends=[BiocGenerics graph RBGL]; }; - SummarizedExperiment = derive2 { name="SummarizedExperiment"; version="1.4.0"; sha256="1kbj8sg2ik9f8d6g95wz0py62jldg01qy5rsdpg1cxw95nf7dzi3"; depends=[Biobase BiocGenerics GenomeInfoDb GenomicRanges IRanges Matrix S4Vectors]; }; - Sushi = derive2 { name="Sushi"; version="1.12.0"; sha256="05cl27h76kvxvsbc70gkma3rv9xnavg9iqm7wncardc2b8jprsk1"; depends=[biomaRt zoo]; }; - SwathXtend = derive2 { name="SwathXtend"; version="1.2.0"; sha256="0r7cmiqmp8pkzzr3hbp8k2wk4gzikxp46bxz90dbxaxhasl0b8i0"; depends=[e1071 lattice openxlsx VennDiagram]; }; - SwimR = derive2 { name="SwimR"; version="1.12.0"; sha256="1mmj7sf1j5414gq5ng0s74xkx0cp93l7js0whnw5bvpp43d2f2iv"; depends=[gplots heatmap_plus R2HTML signal]; }; - TCC = derive2 { name="TCC"; version="1.14.0"; sha256="09kyj1wfpkc0iphd5iml3nh2mxr3dkzs52bbqsn259pc82p8bhxb"; depends=[baySeq DESeq DESeq2 edgeR ROC samr]; }; - TCGAbiolinks = derive2 { name="TCGAbiolinks"; version="2.2.10"; sha256="0cmv0ca3y3nc15na55j4684c2q2g2z64cpfnlxkxkgmd4djkxxwv"; depends=[affy Biobase biomaRt c3net circlize clusterProfiler ComplexHeatmap ConsensusClusterPlus data_table dnet doParallel downloader dplyr EDASeq edgeR genefilter GenomicRanges ggplot2 ggrepel ggthemes gplots gridExtra httr igraph IRanges jsonlite knitr limma matlab minet parmigene pathview plyr R_utils RColorBrewer readr rvest S4Vectors scales selectr stringr SummarizedExperiment supraHex survival survminer tibble XML xml2 xtable]; }; - TDARACNE = derive2 { name="TDARACNE"; version="1.24.0"; sha256="06zvmrdg1rjns750w6mlx817r9fn1nkb75qd4qhcvyz6iagpdh54"; depends=[Biobase GenKern Rgraphviz]; }; - TEQC = derive2 { name="TEQC"; version="3.14.0"; sha256="0a85r0skfjqmqs25lgarghzlq3fqp6gcyi5dzm7s3kn0kin0y8cf"; depends=[Biobase BiocGenerics hwriter IRanges Rsamtools]; }; - TFBSTools = derive2 { name="TFBSTools"; version="1.12.2"; sha256="0r3rgxprc61gmvc636bybw1hqf8li2h52ch54c4jp3ach0bmyjcf"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome caTools CNEr DirichletMultinomial GenomeInfoDb GenomicRanges gtools IRanges RSQLite rtracklayer S4Vectors seqLogo TFMPvalue XML XVector]; }; - TIN = derive2 { name="TIN"; version="1.6.0"; sha256="18y6786wdpq9q4cvxqw0fs01hckgfhqhglpz8sb1hh044i6i00n0"; depends=[aroma_affymetrix data_table impute squash stringr WGCNA]; }; - TPP = derive2 { name="TPP"; version="3.0.3"; sha256="1l0qyjwqcn5hj1820pmxfrfb0c0i226jdpbamx4kmszy5rc3b5yv"; depends=[Biobase doParallel dplyr foreach ggplot2 gridExtra knitr limma magrittr MASS nls2 openxlsx plyr RColorBrewer RCurl reshape2 rmarkdown sme tidyr VennDiagram VGAM]; }; - TRONCO = derive2 { name="TRONCO"; version="2.6.1"; sha256="1hwyac9jrivcl4h4k5fv54ywlf2aicd4hkr44v0mz5wgbdy1glgg"; depends=[bnlearn cgdsr circlize doParallel foreach gRapHD gridExtra gtable gtools igraph iterators R_matlab RColorBrewer Rgraphviz scales xtable]; }; - TSCAN = derive2 { name="TSCAN"; version="1.12.0"; sha256="0zcmm7rwhc85fb5b271mdlynplsh0qdbyaw6h6fnwl8w1rdxfa6d"; depends=[combinat fastICA ggplot2 gplots igraph mclust mgcv plyr shiny]; }; - TSSi = derive2 { name="TSSi"; version="1.20.0"; sha256="0f7xpd4lmv13297klvrskmiwszxl0i980vvg8ba5k9kd60qjk811"; depends=[Biobase BiocGenerics Hmisc IRanges minqa plyr S4Vectors]; }; - TVTB = derive2 { name="TVTB"; version="1.0.2"; sha256="1v3vcyh8sqv7bn06zzndppdpb8vvwm6jgsv0xz9yfx2lnasgbw3v"; depends=[BiocGenerics BiocParallel Biostrings ensembldb ensemblVEP GenomeInfoDb GenomicRanges ggplot2 IRanges reshape2 Rsamtools S4Vectors SummarizedExperiment VariantAnnotation]; }; - TarSeqQC = derive2 { name="TarSeqQC"; version="1.4.1"; sha256="1x57wd2cdfw1qrsqqm6v4flzwzkq1rkq58k214nqmi602sv66nlf"; depends=[BiocGenerics BiocParallel Biostrings cowplot GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 Hmisc IRanges openxlsx plyr reshape2 Rsamtools S4Vectors]; }; - TargetScore = derive2 { name="TargetScore"; version="1.12.0"; sha256="0mj25y82nvlk5sk9d2dh0p96i2bzrh0xl3cjsyxz0r7n2vyzlrl2"; depends=[Matrix pracma]; }; - TargetSearch = derive2 { name="TargetSearch"; version="1.30.0"; sha256="1z7sf0qmq3fcpf9h569f4qd4647p1rl4372w9ch8ykyjc8md7gs0"; depends=[ncdf4]; }; - TitanCNA = derive2 { name="TitanCNA"; version="1.12.0"; sha256="1bi6gx9k3f13zjq1pp79ixzalvql5bjlmb8fb5schghb99yx82m5"; depends=[foreach GenomeInfoDb GenomicRanges IRanges Rsamtools]; }; - ToPASeq = derive2 { name="ToPASeq"; version="1.8.0"; sha256="1b65f3jak7yqlfwwzcld41s40x0p1cfyc2lklvc9ngz8g12hql8z"; depends=[AnnotationDbi Biobase clipper DESeq DESeq2 doParallel edgeR fields graph graphite gRbase KEGGgraph limma locfit qpgraph R_utils RBGL Rcpp Rgraphviz SummarizedExperiment TeachingDemos]; }; - TransView = derive2 { name="TransView"; version="1.18.0"; sha256="0hnk5msxpb8734djy07cgkgcf4wkkfcdcvg14a44drxdiahsijyk"; depends=[BiocGenerics GenomicRanges gplots IRanges Rsamtools S4Vectors zlibbioc]; }; - TurboNorm = derive2 { name="TurboNorm"; version="1.22.0"; sha256="06bs841mfspzsjhh61p25apwmn0qnakbxgj1l142i9bv3z7v69cc"; depends=[affy convert lattice limma marray]; }; - TypeInfo = derive2 { name="TypeInfo"; version="1.40.0"; sha256="108q2bxmqf4mshc5ixbf1v55099lzsprwii5qs0y9y2n8x5ra0h2"; depends=[]; }; - UNDO = derive2 { name="UNDO"; version="1.16.0"; sha256="0pmdb7gkf7g2b45j5hiksppn75ja3r2nm71qr4a2841diz93fsri"; depends=[Biobase BiocGenerics boot MASS nnls]; }; - UniProt_ws = derive2 { name="UniProt.ws"; version="2.14.0"; sha256="10m7qzcvhqvqskhrnxbbk2kx4fpq8dn9k2p8l665ds65ixv8xn9x"; depends=[AnnotationDbi BiocGenerics RCurl RSQLite]; }; - Uniquorn = derive2 { name="Uniquorn"; version="1.2.0"; sha256="19pcbl37khg4m7h4amzzc28xpm5izg8nn998b42pjvibxg6x14hb"; depends=[DBI R_utils RSQLite stringr WriteXLS]; }; - VanillaICE = derive2 { name="VanillaICE"; version="1.36.0"; sha256="00nf5zxjv5409qj79jh1mhidsgkxjk5piysadv2ak8xwpj9zznws"; depends=[Biobase BiocGenerics BSgenome_Hsapiens_UCSC_hg18 crlmm data_table foreach GenomeInfoDb GenomicRanges IRanges lattice matrixStats oligoClasses S4Vectors SummarizedExperiment]; }; - VariantAnnotation = derive2 { name="VariantAnnotation"; version="1.20.3"; sha256="10v8apgfw57nd4dxmdxdrijxpw135jpp2p8wrk3wjpb3hhfjp1qj"; depends=[AnnotationDbi Biobase BiocGenerics Biostrings BSgenome DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment XVector zlibbioc]; }; - VariantFiltering = derive2 { name="VariantFiltering"; version="1.10.1"; sha256="0dy97x77v5ray8d5iw5brs15h4r9l6kizqvziccc47jxxsxl103i"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings BSgenome DBI GenomeInfoDb GenomicFeatures GenomicRanges graph Gviz IRanges RBGL Rsamtools RSQLite S4Vectors shiny SummarizedExperiment VariantAnnotation XVector]; }; - VariantTools = derive2 { name="VariantTools"; version="1.16.0"; sha256="13i481iiv3vi1m1lwi2s1vjaaplb4y1l7blmyvpqbpa87ync5crl"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicFeatures GenomicRanges gmapR IRanges Matrix Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; - Vega = derive2 { name="Vega"; version="1.22.0"; sha256="11a8fz2fb2zyn6fgfa9hs5i4hsswp1hdxhahm41f4spn7acglmj7"; depends=[]; }; - VegaMC = derive2 { name="VegaMC"; version="3.12.0"; sha256="1swjak8yg33ykrfa52jiq7v3rcgwzf1w664j6wifi5bcflgbjhg1"; depends=[Biobase biomaRt genoset]; }; - XBSeq = derive2 { name="XBSeq"; version="1.4.0"; sha256="0f72qyhs8rsa5d4xbpgqd7lzxmgxcvk5dwqihfw714vg8mis7p8y"; depends=[Biobase Delaporte DESeq2 dplyr ggplot2 locfit magrittr matrixStats pracma roar]; }; - XDE = derive2 { name="XDE"; version="2.20.0"; sha256="11phzwfpyc4dfhhgbfn54ybz71jl2z5wyysvfv34d63lv00jj3yp"; depends=[Biobase BiocGenerics genefilter gtools MergeMaid mvtnorm]; }; - XVector = derive2 { name="XVector"; version="0.14.1"; sha256="1j14ip4c260kdp3zcmgfa2v8ky88csa0gfdg6a1xsb64s03hdbm6"; depends=[BiocGenerics IRanges S4Vectors zlibbioc]; }; - YAPSA = derive2 { name="YAPSA"; version="1.0.0"; sha256="104ij0pwc8bfys8by0ha99fhjgr85n9havzcsakawna3vrkj2s3b"; depends=[circlize ComplexHeatmap corrplot dendextend GenomeInfoDb GenomicRanges GetoptLong ggplot2 gridExtra gtrellis KEGGREST lsei PMCMR reshape2 SomaticSignatures VariantAnnotation]; }; - a4 = derive2 { name="a4"; version="1.22.0"; sha256="12c6y89nr4cck4fsx85bnsklpjic2fkyq550xjfjimy7a2jyx9pb"; depends=[a4Base a4Classif a4Core a4Preproc a4Reporting]; }; - a4Base = derive2 { name="a4Base"; version="1.22.0"; sha256="0w1p7ggj9q33filrkgzqkdah6pb81d6lis3p0l4mmy254kgcc61s"; depends=[a4Core a4Preproc annaffy AnnotationDbi Biobase genefilter glmnet gplots limma mpm multtest]; }; - a4Classif = derive2 { name="a4Classif"; version="1.22.0"; sha256="01c0gl0161psm8pbwwj7ny2zfgj7f1h9crzsj2hwl6240p771a51"; depends=[a4Core a4Preproc glmnet MLInterfaces pamr ROCR varSelRF]; }; - a4Core = derive2 { name="a4Core"; version="1.22.0"; sha256="19wb5h9w7zw33hwacnj1y2ylg3ksh1w4vg0mhpgnmrj79zn26wqz"; depends=[Biobase glmnet]; }; - a4Preproc = derive2 { name="a4Preproc"; version="1.22.0"; sha256="1wxf2yp52y63mr3jdsk7x1ah2xm39gwj0sz3fmp42bb1nrga57kh"; depends=[AnnotationDbi]; }; - a4Reporting = derive2 { name="a4Reporting"; version="1.22.0"; sha256="0s57kfn9ca75cqscm6lhs2hw9jxydbcyvj9fwf93ygm731q47lrq"; depends=[annaffy xtable]; }; - aCGH = derive2 { name="aCGH"; version="1.52.0"; sha256="0spz1y4vxi262h6dmrjdimwa58vsksys0mww80lgcqnggc3inzy2"; depends=[Biobase cluster multtest survival]; }; - acde = derive2 { name="acde"; version="1.4.0"; sha256="1rabc0d7fnjw52i6qa4r27ch95jal7kyxmsn1iqfy8mcy8w0dqi4"; depends=[boot]; }; - adSplit = derive2 { name="adSplit"; version="1.44.0"; sha256="0hk5wzssmfaz4vc4hm9xb3j3y285pvcpavcsvas6z68143j39cws"; depends=[AnnotationDbi Biobase cluster GO_db KEGG_db multtest]; }; - affxparser = derive2 { name="affxparser"; version="1.46.0"; sha256="0byfdrrsd3nbs4qdnxcyzb0xd244nnbs5y0h8h6km3fnc2cibghx"; depends=[]; }; - affy = derive2 { name="affy"; version="1.52.0"; sha256="1snq71ligf0wvaxa6zfrl13ydw0zfhspmhdyfk8q3ba3np4cz344"; depends=[affyio Biobase BiocGenerics BiocInstaller preprocessCore zlibbioc]; }; - affyContam = derive2 { name="affyContam"; version="1.32.0"; sha256="0b3bmqnrk9mzl8ap7rabfq9mlfqi9x80721qbc99hycxywdb9cfj"; depends=[affy affydata Biobase]; }; - affyILM = derive2 { name="affyILM"; version="1.26.0"; sha256="19iw1aaqw7a9snhyg00ldj5h2j9gvb04wjl56ikvxfa83i1w2w2d"; depends=[affxparser affy Biobase gcrma]; }; - affyPLM = derive2 { name="affyPLM"; version="1.50.0"; sha256="02kqhjiffq52gsyaz31yz62chs2kh314ivqhwcpkr7pixhsdzhiw"; depends=[affy Biobase BiocGenerics gcrma preprocessCore zlibbioc]; }; - affyPara = derive2 { name="affyPara"; version="1.34.0"; sha256="0f7yrgij5mvwp66hc04lnkp628iva4wb9xs54m573hmvjdmqcjxv"; depends=[affy affyio aplpack snow vsn]; }; - affyQCReport = derive2 { name="affyQCReport"; version="1.52.0"; sha256="0sr24zaav5mqs47mv956m6qn7yjgldqmcjq3pqahb5bfbi6j3gmc"; depends=[affy affyPLM Biobase genefilter lattice RColorBrewer simpleaffy xtable]; }; - affycomp = derive2 { name="affycomp"; version="1.50.0"; sha256="0ar8pv1k0ajx9l53cb0izarfap7wfji6rbjzwhkjzdijkr1ax3gh"; depends=[Biobase]; }; - affycoretools = derive2 { name="affycoretools"; version="1.46.5"; sha256="0c1wpqwqlcdi0sa6dbxkmscd21wni1vrnj7wmxzbf37mq6wcggpp"; depends=[affy AnnotationDbi Biobase BiocGenerics edgeR gcrma ggplot2 GOstats gplots hwriter lattice limma oligoClasses ReportingTools RSQLite S4Vectors xtable]; }; - affyio = derive2 { name="affyio"; version="1.44.0"; sha256="1svsl4mpk06xm505pap913x69ywks99262krag8y4ygpllj7dfyy"; depends=[zlibbioc]; }; - affylmGUI = derive2 { name="affylmGUI"; version="1.48.0"; sha256="1zd7644p3zfw1dlgv1f7d53nml2l6bxmlaa96yazd4n37bvx1k4b"; depends=[affy affyio affyPLM AnnotationDbi BiocInstaller gcrma limma R2HTML tkrplot xtable]; }; - affypdnn = derive2 { name="affypdnn"; version="1.48.0"; sha256="1fk5mvcg3w3p20mrwac972sxd1m1xza6dzd4kc9m5yzkjw7hp5p4"; depends=[affy]; }; - agilp = derive2 { name="agilp"; version="3.6.0"; sha256="00fmn774rzp291fkkfncp1pg0ryg4203pnqhpqlgp58kw7dj1fmd"; depends=[]; }; - alpine = derive2 { name="alpine"; version="1.0.0"; sha256="0gqqk0hv38f1jmlf1n78kphb2p9bsax9lv0mmd5ph5lsi0jdip7j"; depends=[Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph IRanges RBGL Rsamtools S4Vectors speedglm stringr SummarizedExperiment]; }; - alsace = derive2 { name="alsace"; version="1.10.0"; sha256="1qikhcxs24ycap2f2wvkm27fw7r7mlzxzz18am13371igbc8rl9d"; depends=[ALS ptw]; }; - altcdfenvs = derive2 { name="altcdfenvs"; version="2.36.0"; sha256="1z7c2kb5c8d28i110mf6vqnhzijhyz7icjrgjab0jg1jbfm466ad"; depends=[affy Biobase BiocGenerics Biostrings hypergraph makecdfenv S4Vectors]; }; - ampliQueso = derive2 { name="ampliQueso"; version="1.12.0"; sha256="0p0ydmz185hbzvc9rcqk45hqs3288k4zd36x0a6kk6hyjmjx0z05"; depends=[DESeq doParallel edgeR foreach genefilter ggplot2 gplots knitr rgl rnaSeqMap samr statmod VariantAnnotation xtable]; }; - anamiR = derive2 { name="anamiR"; version="1.0.1"; sha256="0rw4dg54vqmwl76917wgw2fz71zghg0jp6gal32vm3752hg92l3s"; depends=[agricolae DBI DESeq2 gplots limma lumi RMySQL SummarizedExperiment]; }; - annaffy = derive2 { name="annaffy"; version="1.46.0"; sha256="0x0d9hhw7n8ay3d2kncl10b8q7ajb4mv8f6dpzg985cf6irm9pgb"; depends=[AnnotationDbi Biobase DBI GO_db KEGG_db]; }; - annmap = derive2 { name="annmap"; version="1.16.0"; sha256="1qfm2r6w10nmixzwrk52mwkldgc6g2fqzlppd84wwf6mlvxsmb4j"; depends=[Biobase BiocGenerics DBI digest genefilter GenomicRanges IRanges lattice RMySQL Rsamtools]; }; - annotate = derive2 { name="annotate"; version="1.52.1"; sha256="0yymz8qxgnbybvfhqrgkd1hh9dhwxdii1yxkhr1zicjgb35xixxb"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl XML xtable]; }; - annotationTools = derive2 { name="annotationTools"; version="1.48.0"; sha256="095mrvw3vjr068zm04z8fdidjg3h8iijdvhdfizkfdp36a6lm3kk"; depends=[Biobase]; }; - annotatr = derive2 { name="annotatr"; version="1.0.3"; sha256="0m4s98sdj5i6wifnf05hb4hjr1qqrpkwjrvc13iq151v2zmzhfbn"; depends=[AnnotationDbi AnnotationHub dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges org_Dm_eg_db org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db readr regioneR reshape2 rtracklayer S4Vectors TxDb_Dmelanogaster_UCSC_dm3_ensGene TxDb_Dmelanogaster_UCSC_dm6_ensGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene TxDb_Rnorvegicus_UCSC_rn4_ensGene TxDb_Rnorvegicus_UCSC_rn5_refGene TxDb_Rnorvegicus_UCSC_rn6_refGene]; }; - anota = derive2 { name="anota"; version="1.22.0"; sha256="0qknx73nx2v9y2d2wc57i07varii1y8cr0dvnjcvwr0bnnbi38za"; depends=[multtest qvalue]; }; - antiProfiles = derive2 { name="antiProfiles"; version="1.14.0"; sha256="1frd43dcyaad6rrm8xdhf8vc4fwqyz6kyjlgvq7bxgfkdl8j0si0"; depends=[locfit matrixStats]; }; - apComplex = derive2 { name="apComplex"; version="2.40.0"; sha256="09sd7jx0as0bqgga0ammqghkx8cff4rl8vs1nzhfpv5g00kzdqvh"; depends=[graph org_Sc_sgd_db RBGL Rgraphviz]; }; - aroma_light = derive2 { name="aroma.light"; version="3.4.0"; sha256="1cgad3xydmglfkqjqqxvxwxnq65m517hp1jwpw0lsfc13ip13f27"; depends=[matrixStats R_methodsS3 R_oo R_utils]; }; - arrayMvout = derive2 { name="arrayMvout"; version="1.32.0"; sha256="1chrnjnl9yx3xjf1hk36x2xmh93hg1dnhifj8nh9c1hwgnwkkaf1"; depends=[affy affyContam Biobase lumi mdqc parody simpleaffy]; }; - arrayQuality = derive2 { name="arrayQuality"; version="1.52.0"; sha256="0nrw7wzs73y4zcvdk96mqprpnzzcn44ys6i4cbk3hvmrqwfgrhj0"; depends=[gridBase hexbin limma marray RColorBrewer]; }; - arrayQualityMetrics = derive2 { name="arrayQualityMetrics"; version="3.30.0"; sha256="0vdvf8wb8dcm2zygqn34l24d6liw3v1qc2nx9sl6wb3zyi4ly60s"; depends=[affy affyPLM beadarray Biobase Cairo genefilter gridSVG Hmisc hwriter lattice latticeExtra limma RColorBrewer setRNG vsn XML]; }; - attract = derive2 { name="attract"; version="1.26.0"; sha256="0wmkydqkrpbn460wa1xsgjic9jfd0j764nn7f7fh5f5iwif1g2gj"; depends=[AnnotationDbi Biobase cluster GOstats KEGGREST limma org_Hs_eg_db reactome_db]; }; - bacon = derive2 { name="bacon"; version="1.2.0"; sha256="1h38yh9d6mc4jbmhnq342ba8xndfmjr9mpf5gnq7hzb7ai2gmspy"; depends=[BiocParallel ellipse ggplot2]; }; - ballgown = derive2 { name="ballgown"; version="2.6.0"; sha256="02f547y31a133jxqwlq0qianjj2lrlr9kn63x9i91vsyf22mb1ya"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges limma RColorBrewer rtracklayer S4Vectors sva]; }; - bamsignals = derive2 { name="bamsignals"; version="1.6.0"; sha256="1k42gvk5mgq4la1fp0in3an2zfdz69h6522jsqhmk0f6i75kg4mb"; depends=[BiocGenerics GenomicRanges IRanges Rcpp Rhtslib zlibbioc]; }; - baySeq = derive2 { name="baySeq"; version="2.8.0"; sha256="136ll90xapsv1p6pns81kk4krgvbhsamhrych9gfb34r8p6pyplr"; depends=[abind edgeR GenomicRanges]; }; - beadarray = derive2 { name="beadarray"; version="2.24.0"; sha256="1yjpkzknvznvc3qacdf6ma1jfxkw5basir3h0ipvfm6jnd07l1g3"; depends=[AnnotationDbi BeadDataPackR Biobase BiocGenerics GenomicRanges ggplot2 illuminaio IRanges limma reshape2]; }; - beadarraySNP = derive2 { name="beadarraySNP"; version="1.40.0"; sha256="1afy96fx6600cw92my65zds9w99y4yxyzbssr06ycfrzz3sd6xrb"; depends=[Biobase quantsmooth]; }; - betr = derive2 { name="betr"; version="1.32.0"; sha256="093lynqrfbb6iai3s2wvwmjjx8p43nb32mxghxf3ymchaq0hnbgw"; depends=[Biobase limma mvtnorm]; }; - bgafun = derive2 { name="bgafun"; version="1.36.0"; sha256="1kjrg0c686cj7ykvas7wknc3lvdlj4jvfybfwqxwnnzxrjqn350l"; depends=[ade4 made4 seqinr]; }; - bgx = derive2 { name="bgx"; version="1.40.0"; sha256="1lzcgfjqgvd0a8r7qi8hyb1l99qw7d68bqzy97sqaaqnfb773qr4"; depends=[affy Biobase gcrma]; }; - bigmelon = derive2 { name="bigmelon"; version="1.0.0"; sha256="1wj8x195gaqq3h0y62ilxsrh0xz17d0vfnbcbblg392a4c41p4j2"; depends=[Biobase gdsfmt methylumi minfi wateRmelon]; }; - bigmemoryExtras = derive2 { name="bigmemoryExtras"; version="1.20.0"; sha256="0zd43xyx433s7aghs3x4963hf2pcr6q6qyx99bxrbkbdws5m9zql"; depends=[bigmemory]; }; - bioCancer = derive2 { name="bioCancer"; version="1.2.0"; sha256="1szkrk81nyxfj8agd010495l8c3iirnixmwly38lz1f16w2p494l"; depends=[AlgDesign AnnotationFuncs Biobase broom car cgdsr clusterProfiler covr curl data_tree DiagrammeR DOSE dplyr DT geNetClassifier ggdendro ggplot2 GPArotation gridExtra htmlwidgets jsonlite knitr lubridate magrittr markdown MASS org_Hs_eg_db plyr pryr psych RCurl reactome_db ReactomePA readr scales shiny shinyAce stringr tibble tidyr visNetwork wordcloud XML yaml]; }; - bioDist = derive2 { name="bioDist"; version="1.46.0"; sha256="1ark28jkh3zi0pc4a0xj9qmim38n9k919avx9ir35wxm81133g0a"; depends=[Biobase KernSmooth]; }; - bioassayR = derive2 { name="bioassayR"; version="1.12.1"; sha256="09sd6naqai7qiwinjwdh6fxgswcs7z9jfh5w93vg34m29i8sry36"; depends=[BiocGenerics ChemmineR DBI Matrix rjson RSQLite XML]; }; - biobroom = derive2 { name="biobroom"; version="1.6.0"; sha256="1r2v43hpk0h6cnsaxxbks4c3c1jnakrpx693px2vg04r2gl9b9pc"; depends=[Biobase broom dplyr tidyr]; }; - biocGraph = derive2 { name="biocGraph"; version="1.36.0"; sha256="1sxhb713sn32kpjin5m0rg32b7gw75d5a6b4m9gqj0p7537phkjd"; depends=[BiocGenerics geneplotter graph Rgraphviz]; }; - biocViews = derive2 { name="biocViews"; version="1.42.0"; sha256="07rjk10b91pkriyq297w86199r2d3sfji3ggs9mq2gyalsa8y4b6"; depends=[Biobase graph RBGL RCurl RUnit XML]; }; - biomaRt = derive2 { name="biomaRt"; version="2.30.0"; sha256="1x0flcghq71784q2l02j0g4f9jkmyb14f6i307n6c59d6ji7h7x6"; depends=[AnnotationDbi RCurl XML]; }; - biomformat = derive2 { name="biomformat"; version="1.2.0"; sha256="1p768n1kw82bl2n1ifsdfvl7rxbxhgg6qg6f72nqn07x2s14rr6g"; depends=[jsonlite Matrix plyr rhdf5]; }; - biomvRCNS = derive2 { name="biomvRCNS"; version="1.14.0"; sha256="111mhlfmnyz2m0n1s6f72kyd37fbs73fdcwva06p8b3v21pq4zbx"; depends=[GenomicRanges Gviz IRanges mvtnorm]; }; - biosigner = derive2 { name="biosigner"; version="1.2.4"; sha256="0ckmmr9lsyvzarwpz49iwz2w31sjzlvp9pblaj5xkw7x2cj06i8l"; depends=[Biobase e1071 randomForest ropls]; }; - biosvd = derive2 { name="biosvd"; version="2.10.0"; sha256="1gd93p178hs9rhh1w1vgxygw997lk3asmmgajkk6mh7463z340hg"; depends=[Biobase BiocGenerics NMF]; }; - biovizBase = derive2 { name="biovizBase"; version="1.22.0"; sha256="0f3zwn0g0rc3ld8dd5sgpr14l9aff57j766h4grkiyazyyb46bnh"; depends=[AnnotationDbi BiocGenerics Biostrings dichromat ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Hmisc IRanges RColorBrewer Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; }; - birta = derive2 { name="birta"; version="1.18.0"; sha256="101bwd0miz377ahc1v7g0rzx1m8qzgy2wmpw57bqnpfn0xawxzg3"; depends=[Biobase limma MASS]; }; - birte = derive2 { name="birte"; version="1.10.0"; sha256="1kkj41d5w70kak00564zjycrcbr8vq3fxkg5f5j710b5shms91v2"; depends=[Biobase glmnet limma MASS nem Rcpp RcppArmadillo]; }; - blima = derive2 { name="blima"; version="1.8.0"; sha256="181xqsmqq1g52dvkxx7b5myj9fd1ss15x853n617fsij8sbnbarb"; depends=[beadarray Biobase BiocGenerics]; }; - bridge = derive2 { name="bridge"; version="1.38.0"; sha256="1jfyg88i8yw6nz15sn3mhg5d7ms5xmimaca57bpj2y8yzzbbmg2k"; depends=[rama]; }; - bsseq = derive2 { name="bsseq"; version="1.10.0"; sha256="0akzqcpcfsldjxyn9znyzdfczkkjpxxf9hfqzjqd3yj4x1hgnf4j"; depends=[Biobase BiocGenerics data_table GenomeInfoDb GenomicRanges gtools IRanges limma locfit matrixStats permute R_utils S4Vectors scales SummarizedExperiment]; }; - bumphunter = derive2 { name="bumphunter"; version="1.14.0"; sha256="08r5bvxnx96rv34lww0ccn1qhy98kwsdlvyp2bq21bmwqgfm5m03"; depends=[AnnotationDbi BiocGenerics doRNG foreach GenomeInfoDb GenomicFeatures GenomicRanges IRanges iterators limma locfit matrixStats S4Vectors]; }; - caOmicsV = derive2 { name="caOmicsV"; version="1.4.0"; sha256="06zksrn6psfwfxqagf5ksqakqkpm32sls4vi8nvfpwkh69s1r7va"; depends=[bc3net igraph]; }; - canceR = derive2 { name="canceR"; version="1.6.0"; sha256="10cai1l21cjdj61rp0s6w1a03fn03dzgcz9snb76yrr24cynhrf8"; depends=[Biobase cgdsr circlize Formula geNetClassifier GSEABase GSEAlm phenoTest plyr rpart RUnit survival tcltk2 tkrplot]; }; - cancerclass = derive2 { name="cancerclass"; version="1.18.0"; sha256="1zff6wz0529gc22c9bfnwa95xxadyhfbxjvr1b51w4zgms2bicfr"; depends=[binom Biobase]; }; - casper = derive2 { name="casper"; version="2.8.0"; sha256="0ckqx8i7pgmjhznpw8pggc2f1147sd7vqhw2a4f0na9mv27l74iq"; depends=[Biobase BiocGenerics coda EBarrays gaga GenomeInfoDb GenomicFeatures GenomicRanges gtools IRanges limma mgcv Rsamtools rtracklayer S4Vectors sqldf survival VGAM]; }; - categoryCompare = derive2 { name="categoryCompare"; version="1.18.0"; sha256="0ppis6agdpccjg8bwr91axy770v67al93pg50zmk1rvbfl25b9gz"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category colorspace GOstats graph GSEABase hwriter RCytoscape]; }; - ccmap = derive2 { name="ccmap"; version="1.0.0"; sha256="1djajivpfz8cgdq5nnhyr48gvdq8igjqfkxbibw975y7ybsrc44z"; depends=[AnnotationDbi BiocInstaller ccdata data_table doParallel foreach xgboost]; }; - ccrepe = derive2 { name="ccrepe"; version="1.10.0"; sha256="14y97n28jqj78xscprgbnlwq4abf1vks3ipmp0w9y1yjj0jk0xl2"; depends=[infotheo]; }; - cellGrowth = derive2 { name="cellGrowth"; version="1.18.0"; sha256="1yxlcli3h35aw9nzffnpv4nby255bmlkrwcdh6rr7i04393qjpzc"; depends=[lattice locfit]; }; - cellHTS2 = derive2 { name="cellHTS2"; version="2.38.0"; sha256="117g37rvi92i21mg2ifxy9dxilvgf52nz3f51jdlcgf1w5zvm3n1"; depends=[Biobase Category genefilter GSEABase hwriter locfit prada RColorBrewer splots vsn]; }; - cellTree = derive2 { name="cellTree"; version="1.4.0"; sha256="1aqjz3cwl34inm7bw9pspgpi15h81si8gki3015j1ib8r45n9wda"; depends=[gplots igraph maptpx slam topGO topicmodels xtable]; }; - cellity = derive2 { name="cellity"; version="1.2.0"; sha256="1lzrhqs1jq8khh3gmca381kcr6szmc17ng2jxpz025isbpc9b8y2"; depends=[AnnotationDbi e1071 ggplot2 mvoutlier org_Hs_eg_db org_Mm_eg_db robustbase topGO]; }; - cghMCR = derive2 { name="cghMCR"; version="1.32.0"; sha256="1d9vygzf4dinr4xwcz7091zlyk798ph99g27dywpkqr7yijgjz8m"; depends=[BiocGenerics CNTools DNAcopy limma]; }; - charm = derive2 { name="charm"; version="2.20.0"; sha256="14vf7jdi5hwk3rysm59kylzfajak0wqafipa8r02rij2h1354c3v"; depends=[Biobase Biostrings BSgenome ff fields genefilter gtools IRanges limma nor1mix oligo oligoClasses preprocessCore RColorBrewer siggenes SQN sva]; }; - chimera = derive2 { name="chimera"; version="1.16.0"; sha256="0j7nhardm70p2l4svdb1cyqwk3j2247q5ig7ya72az5bh3bmamb6"; depends=[AnnotationDbi Biobase BSgenome_Hsapiens_UCSC_hg19 GenomicAlignments GenomicRanges Homo_sapiens Rsamtools TxDb_Hsapiens_UCSC_hg19_knownGene]; }; - chipenrich = derive2 { name="chipenrich"; version="1.12.1"; sha256="0vqhlljikhfb3byla05s0w95n0rfyww1rjp7g6zdsf09fy79pcw7"; depends=[chipenrich_data GenomeInfoDb GenomicRanges IRanges lattice latticeExtra mgcv plyr rms S4Vectors stringr]; }; - chipseq = derive2 { name="chipseq"; version="1.24.0"; sha256="115ayp82rs99iaswrx45skw1i5iacgwzz5k8rzijbp5qic0554n0"; depends=[BiocGenerics GenomicRanges IRanges lattice S4Vectors ShortRead]; }; - chopsticks = derive2 { name="chopsticks"; version="1.38.0"; sha256="1cxr419sdvy5s2whcs49hda3zy5fbgzjqgj9bb651qcwk6vc5n0h"; depends=[survival]; }; - chroGPS = derive2 { name="chroGPS"; version="1.22.0"; sha256="0kq1dgik5dkhqb1as9zpwzpyhbw16c766vyn5all4frh0mpdiy0z"; depends=[Biobase changepoint cluster DPpackage GenomicRanges ICSNP MASS]; }; - chromDraw = derive2 { name="chromDraw"; version="2.4.0"; sha256="0rzrcjzwqjb40l8yc25gscl6hnxwprrv738p46kmdh3a08ghxv5v"; depends=[GenomicRanges Rcpp]; }; - chromPlot = derive2 { name="chromPlot"; version="1.2.0"; sha256="06wg345hkkpaq0m620sqgnwvk11qfkhn5yr8nyv9cbdbihqvg0if"; depends=[biomaRt GenomicRanges]; }; - chromstaR = derive2 { name="chromstaR"; version="1.0.0"; sha256="1qyb07dsag64gspjk29nd3ppylzicsq7rnjafdfhs9pjqwv0vshf"; depends=[bamsignals chromstaRData doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges reshape2 Rsamtools S4Vectors]; }; - cisPath = derive2 { name="cisPath"; version="1.14.0"; sha256="108d1m3d07zblij9wsz2l6bw226bvwwl8w0gq3wdxjmgyjj48jzi"; depends=[]; }; - cleanUpdTSeq = derive2 { name="cleanUpdTSeq"; version="1.12.0"; sha256="09bbqapri4vw9mdlch0hw6v49mxqbknrrj5q9ssyzhjhikz954sq"; depends=[BiocGenerics BSgenome BSgenome_Drerio_UCSC_danRer7 e1071 GenomicRanges seqinr]; }; - cleaver = derive2 { name="cleaver"; version="1.12.0"; sha256="0dnl7ihxhl640k91div133rz9kxa43wkvfyxkyqv31winymk0fy4"; depends=[Biostrings IRanges S4Vectors]; }; - clippda = derive2 { name="clippda"; version="1.24.0"; sha256="0dqlr468awg4r1rnskzjj77c0amcq0nj1rh8j9s5ad6jvspyk1wk"; depends=[Biobase lattice limma rgl scatterplot3d statmod]; }; - clipper = derive2 { name="clipper"; version="1.14.0"; sha256="1qrj1l7qdkq6s8k2zq5rfkwnag0f1ivhcjcnzyszkf8nzpxz019g"; depends=[Biobase corpcor graph gRbase igraph KEGGgraph Matrix qpgraph RBGL Rcpp]; }; - clonotypeR = derive2 { name="clonotypeR"; version="1.12.0"; sha256="1j4s26l2k0msw8yza92348z8kpji0c9a1a83gjn7lazbs27arlnf"; depends=[]; }; - clst = derive2 { name="clst"; version="1.22.0"; sha256="1yilfyf6azwdc48rdvfanjl0anl275qc6p1f2agyf5nfrhacpaaz"; depends=[lattice ROC]; }; - clstutils = derive2 { name="clstutils"; version="1.22.0"; sha256="0wc7xv65dg2qi2778qlk49d3snx4ahv9km74jdysixwww2fqqqs4"; depends=[ape clst lattice rjson RSQLite]; }; - clustComp = derive2 { name="clustComp"; version="1.2.2"; sha256="0pmna9q3y607d04pqyi4vkl5r7hl41cywsplpkmkwmwp8y1v2zls"; depends=[sm]; }; - clusterExperiment = derive2 { name="clusterExperiment"; version="1.0.0"; sha256="0idg0iw7lb1iqzxwpilqh7njz2yv6783nzvmnxvdnx1vj7xihdky"; depends=[ape cluster dendextend howmany limma locfdr matrixStats NMF phylobase RColorBrewer SummarizedExperiment]; }; - clusterProfiler = derive2 { name="clusterProfiler"; version="3.2.14"; sha256="0nip67hzcwc1zary2abcki4cgz32ixxkv9b8apllvz5a26scn02r"; depends=[AnnotationDbi DOSE ggplot2 GO_db GOSemSim IRanges magrittr plyr qvalue tidyr]; }; - clusterStab = derive2 { name="clusterStab"; version="1.46.0"; sha256="1h3j1qs6d5d4whmzljzjlg6favlb8r4nk2sm8sk5kjad37ywz3cm"; depends=[Biobase]; }; - cn_farms = derive2 { name="cn.farms"; version="1.22.0"; sha256="18q8v82i90sj2c19idv5czy8dvlr2qghdlj29nqn8rwh8i04ayz9"; depends=[affxparser Biobase DBI DNAcopy ff lattice oligo oligoClasses preprocessCore snow]; }; - cn_mops = derive2 { name="cn.mops"; version="1.20.1"; sha256="0wrf4k0a2zc6ymhlr6shncw4xdpfzwzfxig7ddrrwx4brrhn1c91"; depends=[Biobase BiocGenerics exomeCopy GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; }; - cnvGSA = derive2 { name="cnvGSA"; version="1.18.0"; sha256="18i6g6hmky6r9c6vgs67kxq5vvyaldlghlbpv518awd0y135fx4x"; depends=[brglm doParallel foreach GenomicRanges splitstackshape]; }; - coGPS = derive2 { name="coGPS"; version="1.18.0"; sha256="0hcyha03gyh6zp1b24h2n9nx0vkzphh2d10nvss3ryaqj9305cxd"; depends=[]; }; - coMET = derive2 { name="coMET"; version="1.6.0"; sha256="0biiz7g893l12ibqdx16zagyk124yjz41mmb8gb283rhlibf6bpm"; depends=[biomaRt colortools corrplot GenomicRanges ggbio ggplot2 gridExtra Gviz hash IRanges psych rtracklayer S4Vectors trackViewer]; }; - coRNAi = derive2 { name="coRNAi"; version="1.24.0"; sha256="0qa7wrsz9m34dr7dm97cqwl2bzxn8zr0fkdqyr6x1jkixxfs76p1"; depends=[cellHTS2 gplots lattice limma locfit MASS]; }; - cobindR = derive2 { name="cobindR"; version="1.12.0"; sha256="1nygdg9bipj1nwv6i1dk3mmmba7jzmf2q4wmqwf9ivgjfaskqd19"; depends=[BiocGenerics biomaRt Biostrings BSgenome gmp gplots IRanges mclust rtfbs seqinr yaml]; }; - codelink = derive2 { name="codelink"; version="1.42.0"; sha256="0kxh3qs8plqlbq38mqyzc8lqcdsh4ig5ar2s12w5z8f17flax1fh"; depends=[annotate Biobase BiocGenerics limma]; }; - cogena = derive2 { name="cogena"; version="1.8.0"; sha256="0q5w7bjaizsvzi576lpkh59j0ynjklq1h2f9sz4wssvi9xpkg7h8"; depends=[amap apcluster Biobase biwt class cluster corrplot devtools doParallel dplyr fastcluster foreach ggplot2 gplots kohonen mclust reshape2]; }; - compEpiTools = derive2 { name="compEpiTools"; version="1.8.0"; sha256="0bc7pmxi7j6gv1irwaab1z3x350pnnarp216lhvkn799g6bard9r"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges GO_db gplots IRanges methylPipe Rsamtools S4Vectors topGO XVector]; }; - compcodeR = derive2 { name="compcodeR"; version="1.10.0"; sha256="0fzwxnf2n408k3548c3ravddd1m6vdc6212vnka5vggjhr6aapbm"; depends=[caTools edgeR gdata ggplot2 gplots gtools KernSmooth knitr lattice limma markdown MASS modeest ROCR sm stringr vioplot]; }; - consensusSeekeR = derive2 { name="consensusSeekeR"; version="1.2.0"; sha256="0fmryl0lhahh75iy1ngqvv607iz1y9a1div3wkhw22hkzwkj0r9m"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges IRanges rtracklayer S4Vectors stringr]; }; - contiBAIT = derive2 { name="contiBAIT"; version="1.2.0"; sha256="07l8fy2caynakkixyipym7wmnvrjdng6j3gqqy6lbsczc18l2ljm"; depends=[BH BiocParallel clue cluster colorspace diagram DNAcopy exomeCopy GenomicAlignments GenomicFiles GenomicRanges ggplot2 gplots gtools IRanges Rcpp reshape2 Rsamtools rtracklayer S4Vectors TSP]; }; - conumee = derive2 { name="conumee"; version="1.8.0"; sha256="0a1abk4xfzlmz87gl6iysgriy1crs7yzhr11qajbayf7qlajyk1l"; depends=[DNAcopy GenomeInfoDb GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest IRanges minfi rtracklayer]; }; - convert = derive2 { name="convert"; version="1.50.0"; sha256="01cgfnlnry5p3zjnb93cwm16kqdcl2szbps4pvgs3b8myznq3c4k"; depends=[Biobase limma marray]; }; - copa = derive2 { name="copa"; version="1.42.0"; sha256="1k93l7sgia6p6acbzdg48pr3l7lcc6v3k4g2mgixm2r130i78s3v"; depends=[Biobase]; }; - copynumber = derive2 { name="copynumber"; version="1.14.0"; sha256="1hm0k2gqgsgqvald19x09pf3x37xyyjwm5f32dxivfb04n504s1v"; depends=[BiocGenerics GenomicRanges IRanges S4Vectors]; }; - cosmiq = derive2 { name="cosmiq"; version="1.8.0"; sha256="12bc7hbjww6kza2hrg2x691h3nrsx74hji93xsk14zkf5z3c17wd"; depends=[faahKO MassSpecWavelet pracma Rcpp xcms]; }; - covEB = derive2 { name="covEB"; version="1.0.0"; sha256="0sbcsf6y68n49w7zvzci3q3dmgi7vji3b3rfa4xzqzdj89zzns8z"; depends=[Biobase gsl igraph mvtnorm]; }; - covRNA = derive2 { name="covRNA"; version="1.0.0"; sha256="0igvcnni8in70dch50l6vx8aj66rgbaxh93y0bv86mnvmzs5avhk"; depends=[ade4 Biobase genefilter]; }; - cpvSNP = derive2 { name="cpvSNP"; version="1.6.0"; sha256="0yw04dsbhvg1hfhd71b76cny79r553y8gfin2jzzy6jkifzd19fq"; depends=[BiocParallel corpcor GenomicFeatures ggplot2 GSEABase plyr]; }; - cqn = derive2 { name="cqn"; version="1.20.0"; sha256="1ac8kwd43ynli6hwfz9innlpiys1vyvq0ic8garixwpv9qwayrvs"; depends=[mclust nor1mix preprocessCore quantreg]; }; - crisprseekplus = derive2 { name="crisprseekplus"; version="1.0.0"; sha256="1cvz483j94v2kk6fcjh22kj71zs097wghqfsdmr128za38x9vxf0"; depends=[AnnotationDbi BiocInstaller BSgenome CRISPRseek DT GenomicFeatures GenomicRanges GUIDEseq hash shiny shinyjs]; }; - crlmm = derive2 { name="crlmm"; version="1.32.0"; sha256="1pa8879k0xdgmz5mk4lq8rhi0v9ai01bv3h1c0cq6blhvyca1rw2"; depends=[affyio beanplot Biobase BiocGenerics ellipse ff foreach illuminaio lattice limma matrixStats mvtnorm oligoClasses preprocessCore RcppEigen SNPchip VGAM]; }; - crossmeta = derive2 { name="crossmeta"; version="1.0.1"; sha256="1fid7bl27vsj6kxkwpymkvm5b8p5xq25xk3d8x2r1k4sx10nfidl"; depends=[affxparser affy AnnotationDbi Biobase BiocGenerics BiocInstaller data_table DT fdrtool GEOquery limma matrixStats metaMA miniUI oligo pander RColorBrewer rdrop2 shiny stringr sva]; }; - csaw = derive2 { name="csaw"; version="1.8.1"; sha256="0vq3kxwqaaxz7k710f5y3pb8jidiqp815f5h4hy174cgmj3y1sz2"; depends=[AnnotationDbi BiocGenerics BiocParallel edgeR GenomeInfoDb GenomicFeatures GenomicRanges IRanges limma Rhtslib Rsamtools S4Vectors SummarizedExperiment zlibbioc]; }; - ctc = derive2 { name="ctc"; version="1.48.0"; sha256="137087cms5rdivm1fh2m5v414lcf96sch409b3yapkl8zva99i0q"; depends=[amap]; }; - ctsGE = derive2 { name="ctsGE"; version="1.0.0"; sha256="00dmky3fggz0xq1hwwk5xk9lbk93jmym5fc0g628apq520g9h7b0"; depends=[ccaPP ggplot2 limma reshape2 shiny stringr]; }; - cummeRbund = derive2 { name="cummeRbund"; version="2.16.0"; sha256="1191frlhs738xcfqcw0la7jx4jhiqfnqqcaj1a8z61p0rkx2vi70"; depends=[Biobase BiocGenerics fastcluster ggplot2 Gviz plyr reshape2 RSQLite rtracklayer S4Vectors]; }; - customProDB = derive2 { name="customProDB"; version="1.14.1"; sha256="0m4gl4w7lwvz1irwbrgx4xz8ipz55h2xz85pl89jpr35cxv7gh6z"; depends=[AnnotationDbi biomaRt Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges plyr RCurl Rsamtools RSQLite rtracklayer S4Vectors stringr VariantAnnotation]; }; - cycle = derive2 { name="cycle"; version="1.28.0"; sha256="17azpsw3ah7ifshn0gfnfa458y70l551ix4s623d3wjbzdbk03kj"; depends=[Biobase Mfuzz]; }; - cytofkit = derive2 { name="cytofkit"; version="1.6.5"; sha256="1ml3g8p9r7azg3c31izrvkbpfss49q8ns293jqsk9470h9yl2p4m"; depends=[Biobase colourpicker destiny doParallel e1071 flowCore FlowSOM ggplot2 ggrepel gplots igraph pdist plyr RANN Rcpp reshape2 Rtsne shiny vegan VGAM]; }; - dSimer = derive2 { name="dSimer"; version="1.0.0"; sha256="0a36xlq0hsn7krf23ynmny6gckv3iisisr7pp928jblh43pspr0r"; depends=[AnnotationDbi ggplot2 GO_db igraph org_Hs_eg_db Rcpp reshape2]; }; - daMA = derive2 { name="daMA"; version="1.46.0"; sha256="04x1ipqa04khki98yq8qyzlwjwz3p3ra18s4qc1hkfqsgqij20bm"; depends=[MASS]; }; - dada2 = derive2 { name="dada2"; version="1.2.2"; sha256="1996n96afn074h5mkwbdi8chvswb8xc9ms6rnbb060vdzwsrfi7k"; depends=[Biostrings data_table ggplot2 Rcpp RcppParallel reshape2 ShortRead]; }; - dagLogo = derive2 { name="dagLogo"; version="1.12.0"; sha256="14swyk3vywbm09cs4ny7wrjy9q4nmpy5nis1ik18ilmifqff3xh7"; depends=[biomaRt Biostrings grImport motifStack pheatmap]; }; - dcGSA = derive2 { name="dcGSA"; version="1.2.0"; sha256="0fz730m7agvidrq3rdkymaa9vn5ry0jj2p8bzlpzb8ab7siaqapr"; depends=[BiocParallel Matrix]; }; - ddCt = derive2 { name="ddCt"; version="1.30.0"; sha256="03j2njmx90ivd9rb2vsd4fxcciwy9q8fj48rv3z43wrq4vbkf8s8"; depends=[Biobase BiocGenerics lattice RColorBrewer xtable]; }; - ddgraph = derive2 { name="ddgraph"; version="1.18.0"; sha256="17rmc4fcf1vac9jw95h4nqr32jk7vpn10ddxgl0qp9zcabxd8vm6"; depends=[bnlearn graph gtools MASS pcalg plotrix RColorBrewer Rcpp]; }; - debrowser = derive2 { name="debrowser"; version="1.3.11"; sha256="18hc0zlw0dzhqsnjhw7grb77y3mya2hdp1g4kgkk9fah44y8xihs"; depends=[annotate AnnotationDbi baySeq clusterProfiler d3heatmap DESeq2 devtools DOSE DT edgeR GenomicRanges ggplot2 ggvis gplots igraph IRanges jsonlite limma org_Hs_eg_db org_Mm_eg_db RColorBrewer RCurl reshape2 S4Vectors shiny shinydashboard shinyjs stringi SummarizedExperiment sva V8]; }; - deepSNV = derive2 { name="deepSNV"; version="1.20.0"; sha256="00zl9sxifx4z2ydab6fdfyaidfin0m79v603nwv1h3kac703awvs"; depends=[Biostrings GenomicRanges IRanges Rhtslib SummarizedExperiment VariantAnnotation VGAM]; }; - deltaGseg = derive2 { name="deltaGseg"; version="1.14.0"; sha256="1qwzfg284ac8snwc1v9lwqd2cfkzvgp1gc0baf802kdwnp94hpq5"; depends=[changepoint fBasics ggplot2 pvclust reshape scales tseries wavethresh]; }; - derfinder = derive2 { name="derfinder"; version="1.8.5"; sha256="1snwy5q99jy5lcnrdmanclyhfsiax5gslznphzpps19hdzby045r"; depends=[AnnotationDbi BiocParallel bumphunter derfinderHelper GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges Hmisc IRanges qvalue Rsamtools rtracklayer S4Vectors]; }; - derfinderHelper = derive2 { name="derfinderHelper"; version="1.8.1"; sha256="0920kl7lsjf9hzxh304q2n4n5nscxmaiacxqbn2ql9ja7saypqag"; depends=[IRanges Matrix S4Vectors]; }; - derfinderPlot = derive2 { name="derfinderPlot"; version="1.8.1"; sha256="0fvyira43hknhs72s520czprgcgy4hh54pmcsd3caca2f077cxks"; depends=[derfinder GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 IRanges limma plyr RColorBrewer reshape2 S4Vectors scales]; }; - destiny = derive2 { name="destiny"; version="2.0.8"; sha256="1zqmfi8ha028lcwb147m4xin4zkgrg5aqh4mp0aidqv0d8p59hkp"; depends=[Biobase BiocGenerics FNN Hmisc igraph Matrix proxy Rcpp RcppEigen scales scatterplot3d smoother VIM]; }; - dexus = derive2 { name="dexus"; version="1.14.0"; sha256="04vihwcvb7kx1i1pws5rhk1cdnkrhh6ipi8fwz2yfizyc253hfmh"; depends=[BiocGenerics]; }; - diffGeneAnalysis = derive2 { name="diffGeneAnalysis"; version="1.56.0"; sha256="17fyvgw9izdzhh1nmd0g0ibaxsy36438dbvszf9c447h21qqr3r5"; depends=[minpack_lm]; }; - diffHic = derive2 { name="diffHic"; version="1.6.0"; sha256="1331cf5d774hsd037gvzjx8dym5m0kk2azjb17gls1fqd08y33g6"; depends=[BiocGenerics Biostrings BSgenome csaw edgeR GenomeInfoDb GenomicRanges InteractionSet IRanges limma locfit rhdf5 Rhtslib Rsamtools S4Vectors SummarizedExperiment zlibbioc]; }; - diffloop = derive2 { name="diffloop"; version="1.2.2"; sha256="1hkhprz6bxpd94l5648j03xxn5rj85dl4dl419pfi4n7r21gywrq"; depends=[Biobase biomaRt data_table dplyr edgeR foreach GenomeInfoDb GenomicRanges ggplot2 IRanges limma locfit matrixStats pbapply plyr readr reshape2 rtracklayer S4Vectors statmod Sushi]; }; - diggit = derive2 { name="diggit"; version="1.6.0"; sha256="0n5slh0w1g8zdnrbqxfram5j82yy5aaw9m7h5r5ybw6hbwmjf93r"; depends=[Biobase ks viper]; }; - dks = derive2 { name="dks"; version="1.20.0"; sha256="09y7h7gw5p3rxrbwg4mq4qpp89cv6gj45idilv30jvsjyvv03a31"; depends=[cubature]; }; - domainsignatures = derive2 { name="domainsignatures"; version="1.34.0"; sha256="0sw6fyv91nrgf55g0387hghxa7gsfcqb81lmpg11ccvm8pzj7hlp"; depends=[AnnotationDbi biomaRt KEGG_db prada]; }; - doppelgangR = derive2 { name="doppelgangR"; version="1.2.0"; sha256="06zbgkyi38v80d2szfhklbnxpnl3lfqq78ha7y8zwa2l16pkpj0m"; depends=[Biobase BiocParallel digest impute mnormt sva]; }; - dualKS = derive2 { name="dualKS"; version="1.34.0"; sha256="1qh3v18gp1flryj6wzyvi20rd7gh35rvq9cyir72cj801w95rkzs"; depends=[affy Biobase]; }; - dupRadar = derive2 { name="dupRadar"; version="1.4.0"; sha256="1m0fk5aq5nx98khkahq1wwq4hs6rfnf3gi0bnyfcm0719hk70nah"; depends=[Rsubread]; }; - dyebias = derive2 { name="dyebias"; version="1.34.0"; sha256="16nxwg53ccx128k5ih26gm9z18n6prbas7nxm5hgfl44ihl6a2w6"; depends=[Biobase marray]; }; - easyRNASeq = derive2 { name="easyRNASeq"; version="2.10.0"; sha256="1jjwskac47scnbs0xdxw48l2lm389gpf38rg93z6z4sri5qk9xbk"; depends=[Biobase BiocGenerics BiocParallel biomaRt Biostrings DESeq edgeR GenomeInfoDb genomeIntervals GenomicAlignments GenomicRanges IRanges locfit LSD Rsamtools S4Vectors ShortRead SummarizedExperiment]; }; - ecolitk = derive2 { name="ecolitk"; version="1.46.0"; sha256="1mz2qk6cf0sq2395p7snj9mjqnsh3jkcbj3hd4awc4iyj4zrcw3l"; depends=[Biobase]; }; - edge = derive2 { name="edge"; version="2.6.0"; sha256="02825wnwysafi06vr5vglwld52hz9dvyrsz57rxx7bfras1y60xw"; depends=[Biobase jackstraw MASS qvalue snm sva]; }; - edgeR = derive2 { name="edgeR"; version="3.16.5"; sha256="04vpa0a6dkkjyvvfbkmfjyaxf2ldkagi66g028qpaszd8jsk8yiv"; depends=[limma locfit]; }; - eegc = derive2 { name="eegc"; version="1.0.0"; sha256="00l7aym526p9l6iz3j72v9n2c42l70mm1nx7q653jfhbivdikh0i"; depends=[AnnotationDbi clusterProfiler DESeq2 DOSE edgeR ggplot2 gplots igraph limma org_Hs_eg_db org_Mm_eg_db pheatmap R_utils S4Vectors sna wordcloud]; }; - eiR = derive2 { name="eiR"; version="1.14.1"; sha256="16s07903wq9wwirkwv4pd77kpi1rkbmlyg24bg38zlanfyqprqfq"; depends=[BH BiocGenerics ChemmineR DBI digest RCurl RUnit snow snowfall]; }; - eisa = derive2 { name="eisa"; version="1.26.0"; sha256="0hvpk8jsh5f0b23n4bk8h238j4afw1fdkcr9l4k3m9hm4078xjj0"; depends=[AnnotationDbi Biobase BiocGenerics Category DBI genefilter isa2]; }; - ensemblVEP = derive2 { name="ensemblVEP"; version="1.14.0"; sha256="175fj7w2zawpymsjbcqxwp82la6lb60ajp5sbz3hkr9mscb9xi19"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges S4Vectors SummarizedExperiment VariantAnnotation]; }; - ensembldb = derive2 { name="ensembldb"; version="1.6.2"; sha256="1hxvjplkgkibjfzrbi6whqr7czf5digh96j7ww6szdyxy86gbf3r"; depends=[AnnotationDbi AnnotationHub Biobase BiocGenerics DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges Rsamtools RSQLite rtracklayer S4Vectors]; }; - epigenomix = derive2 { name="epigenomix"; version="1.14.0"; sha256="0wp8xbqy98b9i1vwdhjg3wbsi2nfqm9vl1alzp67s92sdafa0lax"; depends=[beadarray Biobase BiocGenerics GenomeInfoDb GenomicRanges IRanges MCMCpack Rsamtools S4Vectors SummarizedExperiment]; }; - epivizr = derive2 { name="epivizr"; version="2.4.1"; sha256="119q39cr0fawrr4a64qx4fxddwmxcav44fq4i0dip0wf7pr7wwrw"; depends=[epivizrData epivizrServer GenomicRanges IRanges S4Vectors]; }; - epivizrData = derive2 { name="epivizrData"; version="1.2.0"; sha256="0vr3czsdky6f4s60jg8ddm47kf5qsk3dj76kwwbaz9ffd3sgsv0z"; depends=[Biobase epivizrServer GenomeInfoDb GenomicFeatures GenomicRanges IRanges OrganismDbi S4Vectors SummarizedExperiment]; }; - epivizrServer = derive2 { name="epivizrServer"; version="1.2.0"; sha256="0ajxc77g604m5756bx8ivv0jqfdkglh4vjc4295d1dzwml555xil"; depends=[httpuv mime R6 rjson]; }; - epivizrStandalone = derive2 { name="epivizrStandalone"; version="1.2.0"; sha256="0nm644hmryyn8wsgzm129nldixn6z3yqff6851c7nwifz7vkzsln"; depends=[BiocGenerics epivizr epivizrServer GenomeInfoDb GenomicFeatures git2r S4Vectors]; }; - erccdashboard = derive2 { name="erccdashboard"; version="1.8.0"; sha256="09hba0gbfgq7799kd41vm4j7qsyhkfg1awi8mymqqfb9fkdladkh"; depends=[edgeR ggplot2 gplots gridExtra gtools limma locfit MASS plyr QuasiSeq qvalue reshape2 ROCR scales stringr]; }; - erma = derive2 { name="erma"; version="0.6.0"; sha256="1540i8m9fr2v8n8pzf0zfjcv2gxmfd1b2fld73hkcfv2mkfiks1m"; depends=[AnnotationDbi Biobase BiocGenerics foreach GenomicFiles GenomicRanges ggplot2 Homo_sapiens rtracklayer S4Vectors shiny SummarizedExperiment]; }; - esetVis = derive2 { name="esetVis"; version="1.0.1"; sha256="1s56qkm0r93bl7bfsp804q5fhcqmkazwh9g5jv01v23llsd6i0b6"; depends=[Biobase hexbin MASS MLP mpm Rtsne]; }; - eudysbiome = derive2 { name="eudysbiome"; version="1.4.0"; sha256="1sjqn0l25hw8y8i0g0ba22h5z9drj7m6104dwyfl41rprrasxjps"; depends=[Biostrings plyr R_utils Rsamtools]; }; - exomeCopy = derive2 { name="exomeCopy"; version="1.20.0"; sha256="1hdhbnb318m05bhiqijnci1d0q40d0lpw5cnvsszg6jykks3axxm"; depends=[GenomeInfoDb GenomicRanges IRanges Rsamtools]; }; - exomePeak = derive2 { name="exomePeak"; version="2.8.0"; sha256="0573n29115djdbb47dkidwrx9m9j84ajamqanq0vx8rgjrg2xljm"; depends=[GenomicAlignments GenomicFeatures Rsamtools rtracklayer]; }; - explorase = derive2 { name="explorase"; version="1.38.0"; sha256="04338jfp3kf8wngm15ws3q2r6d2wc7kvzvf50nmx6dji52952807"; depends=[limma rggobi RGtk2]; }; - fCCAC = derive2 { name="fCCAC"; version="1.0.0"; sha256="0mgzk2siwwq5ajmzqv7k5w3a8zsha7vawqj3frzfmsccbaifdw9h"; depends=[ComplexHeatmap fda genomation GenomicRanges ggplot2 IRanges RColorBrewer S4Vectors]; }; - fCI = derive2 { name="fCI"; version="1.4.0"; sha256="188599kcl50k3lvdn5z1r3xy4fnipma2idacxglrfh5pxbnc0wf7"; depends=[FNN gtools psych rgl VennDiagram zoo]; }; - fabia = derive2 { name="fabia"; version="2.20.0"; sha256="14lnyc9b0h9kb0xp7miiz3znwsbdb3ar1j5qlnfl0s9syc9y0p46"; depends=[Biobase]; }; - facopy = derive2 { name="facopy"; version="1.8.0"; sha256="02z3bdsiz3crzlb038av9bsmbwq2wi3hxfdizngkcc8x2zp4gl4f"; depends=[annotate cgdsr coin data_table DOSE facopy_annot FactoMineR ggplot2 GO_db GOstats graphite gridExtra igraph IRanges MASS nnet reshape2 Rgraphviz S4Vectors scales]; }; - factDesign = derive2 { name="factDesign"; version="1.50.0"; sha256="0zmbnb5nf6724k6xbmn19pp2jflfr0ckl11zhms0yhhmagd17wlz"; depends=[Biobase]; }; - farms = derive2 { name="farms"; version="1.26.0"; sha256="00hxllk193v5rbmqzayv7cizlz1kpba7jpxafd2n02471ga7qjvf"; depends=[affy Biobase MASS]; }; - fastLiquidAssociation = derive2 { name="fastLiquidAssociation"; version="1.10.0"; sha256="0aqagldg2qc8fhk6131dj4rr5yka0sr19m7pqr1pxczg6gn7yxpr"; depends=[Hmisc LiquidAssociation WGCNA]; }; - fastseg = derive2 { name="fastseg"; version="1.20.0"; sha256="1ax0c5apmixyl7daahb3wqq8m8mc6prrylgfgbnv02rx5b3ii9hn"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors]; }; - fdrame = derive2 { name="fdrame"; version="1.46.0"; sha256="1zc40aa32jijmvxc07sv4gp0hdw0m4rd06aslfjyb7ngsz16lik6"; depends=[]; }; - ffpe = derive2 { name="ffpe"; version="1.18.0"; sha256="0p1sdapm6394j2xknn44g1vgry1ys004q9fkgchv40yy874ym1w9"; depends=[affy Biobase BiocGenerics lumi methylumi sfsmisc TTR]; }; - fgsea = derive2 { name="fgsea"; version="1.0.2"; sha256="1yq4s4g4xxzcpkv9dpbg29444iy38vfgwj4wgr47rjjq8njfblfx"; depends=[BiocParallel data_table fastmatch ggplot2 gridExtra Rcpp]; }; - flagme = derive2 { name="flagme"; version="1.30.0"; sha256="0s6f1928fswv8fvbqrhgq6ah0j7pqpar9q5xs3nwmig3nb9x8win"; depends=[CAMERA gcspikelite gplots MASS SparseM xcms]; }; - flipflop = derive2 { name="flipflop"; version="1.12.0"; sha256="1sbqdynm4wbz3ybyzdaa6scpyav9fyn0zjm817sl8gpnsnp89m5g"; depends=[GenomicRanges IRanges Matrix]; }; - flowAI = derive2 { name="flowAI"; version="1.2.10"; sha256="1hwhzzjz7hwc9751p7kvs32w0nqn3yzkbwh8v7mdpfxsx7xi5pfp"; depends=[changepoint flowCore ggplot2 knitr plyr RColorBrewer reshape2 scales]; }; - flowBeads = derive2 { name="flowBeads"; version="1.12.0"; sha256="1zpjgk2ppcgmhlqmknsgp0wagilgdqk8mfhjnc474yrr339dwvcs"; depends=[Biobase flowCore knitr rrcov xtable]; }; - flowBin = derive2 { name="flowBin"; version="1.10.0"; sha256="0357nin7rcapvj82c1bxmgcn6gryi8avgzqszhk264qzmlhl2kq7"; depends=[BiocGenerics class flowCore flowFP limma snow]; }; - flowCHIC = derive2 { name="flowCHIC"; version="1.8.0"; sha256="1fvy99wql8lszd5kcp9gms111hw8mxkmdv68jl8cya3x7b113cr5"; depends=[EBImage flowCore ggplot2 hexbin vegan]; }; - flowCL = derive2 { name="flowCL"; version="1.12.0"; sha256="0cxaixdx1i25p0vv8b6ynjb144cz6b9lyx40d0i21iv0fxvyxb37"; depends=[graph Rgraphviz SPARQL]; }; - flowClean = derive2 { name="flowClean"; version="1.12.0"; sha256="05jnp36ar05sgy06rfd91zkjsbinag7nylz4fimkzlsfwkaya2i1"; depends=[bit changepoint flowCore sfsmisc]; }; - flowClust = derive2 { name="flowClust"; version="3.12.2"; sha256="1hq7wmzd2jpbr8scvi7scg2y1cf5pq562fsl14i1p4112fhj88n1"; depends=[Biobase BiocGenerics clue ellipse flowCore flowViz graph MCMCpack mnormt RBGL]; }; - flowCore = derive2 { name="flowCore"; version="1.40.6"; sha256="0r4plrqbmqhn7zlhr6c8zb969r41jsdb0v7vk730zc8bqhqnw5c0"; depends=[BH Biobase BiocGenerics corpcor graph matrixStats Rcpp rrcov]; }; - flowCyBar = derive2 { name="flowCyBar"; version="1.10.0"; sha256="0q3lizif3mc057yfbxsm1b6l79ia3ls9iaalnsrlmxlbqk3rylcp"; depends=[gplots vegan]; }; - flowDensity = derive2 { name="flowDensity"; version="1.8.0"; sha256="0s0zd6q5fxl40wv9fmdd6g2x8ar67ian0ihn61v95z2kgcrz2ygd"; depends=[car flowCore GEOmap gplots RFOC]; }; - flowFP = derive2 { name="flowFP"; version="1.32.0"; sha256="010m41pbz2f5rcx6453x889mjwbx0rx37lcnfhrz3hsnzqnykdim"; depends=[Biobase BiocGenerics flowCore flowViz]; }; - flowFit = derive2 { name="flowFit"; version="1.12.0"; sha256="1laaa4f4jbhr1ri6zakbh2wwivhq8b44xmb1yvvrjy61fqfl4d9f"; depends=[flowCore flowViz gplots kza minpack_lm]; }; - flowMap = derive2 { name="flowMap"; version="1.12.0"; sha256="0pnq4dc364dr6wjvim5dav8399k2vwq0i7zfbjq70r8hk6d59c53"; depends=[abind ade4 doParallel Matrix reshape2 scales]; }; - flowMatch = derive2 { name="flowMatch"; version="1.10.0"; sha256="11r1x2aicbgj5sbyinwzniv463yrpvxlm36agmspgjnq4ir1p3m7"; depends=[Biobase flowCore Rcpp]; }; - flowMeans = derive2 { name="flowMeans"; version="1.34.0"; sha256="1jqci86yi0q5qvzhj9448gvv587kgkbx79r90957bwzj6z5nlj2z"; depends=[Biobase feature flowCore rrcov]; }; - flowMerge = derive2 { name="flowMerge"; version="2.22.0"; sha256="07x5im2m98nszcaw4ip6l3pnd6j6nrc17amnnpxqpnbpm73hfsz6"; depends=[feature flowClust flowCore foreach graph Rgraphviz rrcov snow]; }; - flowPeaks = derive2 { name="flowPeaks"; version="1.18.0"; sha256="1211wcypqjwdv2w4pyzkmjg2c0yz18r5i4mdj114lbia6v1p1jza"; depends=[]; }; - flowPloidy = derive2 { name="flowPloidy"; version="1.0.0"; sha256="189al2wzpr1f7haihifyfzvd42sj6nk6f305ny5v9lcr4afp3538"; depends=[car caTools flowCore knitr minpack_lm rmarkdown shiny]; }; - flowPlots = derive2 { name="flowPlots"; version="1.22.0"; sha256="0wskj8nfi0zd7rmx0spz8l2h8xzw4qpm9qnxv7s4cq3s8spknbmp"; depends=[]; }; - flowQ = derive2 { name="flowQ"; version="1.34.0"; sha256="0ax0m6dzfhnr0n0qnhxlhq58vrxy583c9aznczldx808xf2krx8x"; depends=[BiocGenerics bioDist flowCore flowViz geneplotter IRanges lattice latticeExtra mvoutlier outliers parody RColorBrewer]; }; - flowQB = derive2 { name="flowQB"; version="2.2.0"; sha256="11kwv1nwzvpfppla5n3zsz64hljlrjblbcgd04hfzzqbck5d9c7w"; depends=[extremevalues flowCore]; }; - flowStats = derive2 { name="flowStats"; version="3.32.0"; sha256="104yp7agkvr7p8ywmrqh8xy1anrvrnnwwl34pw68bl50p7dcb5qp"; depends=[Biobase BiocGenerics cluster fda flowCore flowViz flowWorkspace KernSmooth ks lattice MASS ncdfFlow]; }; - flowTrans = derive2 { name="flowTrans"; version="1.26.0"; sha256="11h6rs6844mv5wjkr9l5hlmfv2nkwzrhg80l773mx2yllzqq84vg"; depends=[flowClust flowCore flowViz]; }; - flowType = derive2 { name="flowType"; version="2.12.0"; sha256="1ghbxlfpc9l1cg54b898rh3p79dldhpza4qynyx2q3b0yc4hanil"; depends=[BH Biobase flowClust flowCore flowMeans flowMerge Rcpp rrcov sfsmisc]; }; - flowUtils = derive2 { name="flowUtils"; version="1.38.0"; sha256="0rs62hbfzgb2mva7irjmnqcccn2zp3cn1177ji6faszkzsnmmz0i"; depends=[Biobase corpcor flowCore graph RUnit XML]; }; - flowVS = derive2 { name="flowVS"; version="1.6.0"; sha256="1ivsyqrxg4xg67jgmn9rm9pmmr751bpfxqsgpx8m8cw8ywxbvm3m"; depends=[flowCore flowStats flowViz]; }; - flowViz = derive2 { name="flowViz"; version="1.38.0"; sha256="1jrn6j2i1i6hiw4xc7s271rixz1qi4nr9awyx1dv48fnp5bhz2dd"; depends=[Biobase flowCore hexbin IDPmisc KernSmooth lattice latticeExtra MASS RColorBrewer]; }; - flowWorkspace = derive2 { name="flowWorkspace"; version="3.20.5"; sha256="17yd6hhlmagpasp3cksza1v8g62kkl1nw8rh0jif8sxz6hlsh7jd"; depends=[BH Biobase BiocGenerics data_table dplyr flowCore flowViz graph gridExtra lattice latticeExtra ncdfFlow RBGL RColorBrewer Rcpp Rgraphviz scales stringr XML]; }; - flowcatchR = derive2 { name="flowcatchR"; version="1.8.0"; sha256="0mzjva3vyf7xcgcr62aiy547p2ga9kv2543bwjd3f7y6ankz7cnn"; depends=[abind BiocParallel colorRamps EBImage rgl]; }; - fmcsR = derive2 { name="fmcsR"; version="1.16.0"; sha256="05k8c8vhdq6lqgrmc8r7dqwixindwpn32hp2a52vkqny8gn9fvbg"; depends=[BiocGenerics ChemmineR RUnit]; }; - focalCall = derive2 { name="focalCall"; version="1.8.0"; sha256="088453sxnlz76iz6fkardi3pb3z033pi4x9na6gn85sxpa53byqf"; depends=[CGHcall]; }; - frma = derive2 { name="frma"; version="1.26.0"; sha256="1q6hfmdh1m9nifz593i70x58q877lkyx55yigw095f2pgr7ikqg5"; depends=[affy Biobase BiocGenerics DBI MASS oligo oligoClasses preprocessCore]; }; - frmaTools = derive2 { name="frmaTools"; version="1.26.0"; sha256="1vjdci710y9zzbnhfc1yp48bzvnzp2lrl6q6gqxc64m4xh4s0fs0"; depends=[affy Biobase DBI preprocessCore]; }; - gCMAP = derive2 { name="gCMAP"; version="1.18.0"; sha256="1s4zdhwxpwv8ddp3914syrbmpfhryvaq2lqiyal4nhhp5nklbmlj"; depends=[annotate AnnotationDbi Biobase Category DESeq genefilter GSEABase GSEAlm limma Matrix]; }; - gCMAPWeb = derive2 { name="gCMAPWeb"; version="1.14.0"; sha256="1wdfj1qf8d80qxj17ji863gripdxdzcldfw5s6z7jblirabsxp7j"; depends=[annotate AnnotationDbi Biobase BiocGenerics brew gCMAP GSEABase hwriter Rook yaml]; }; - gCrisprTools = derive2 { name="gCrisprTools"; version="1.0.0"; sha256="1zqxj566hzmd1yfjrc0nfvd1djsf2vpj1jcx25c85ssssbh3if2f"; depends=[Biobase BiocParallel ggplot2 limma PANTHER_db rmarkdown RobustRankAggreg]; }; - gQTLBase = derive2 { name="gQTLBase"; version="1.6.0"; sha256="07fas0d1ybpk9h8qf4hdhnh0gq9ip9xc4hfaxsdnk65xy2p4dvhc"; depends=[BatchJobs BBmisc BiocGenerics bit doParallel ff ffbase foreach GenomicFiles GenomicRanges rtracklayer S4Vectors SummarizedExperiment]; }; - gQTLstats = derive2 { name="gQTLstats"; version="1.6.0"; sha256="0lpnn8992dy7bavsyym3m361sgyra54p8wz0xg25f0d4dw5bg4sq"; depends=[AnnotationDbi BatchJobs BBmisc beeswarm Biobase BiocGenerics doParallel dplyr ffbase foreach GenomeInfoDb GenomicFeatures GenomicFiles GenomicRanges ggplot2 gQTLBase IRanges limma mgcv reshape2 S4Vectors snpStats SummarizedExperiment VariantAnnotation]; }; - gaga = derive2 { name="gaga"; version="2.20.0"; sha256="1jnbmirwxnwdyvx76gqrz4y8rx5g9llnnbz06sqjkigprians1lw"; depends=[Biobase coda EBarrays mgcv]; }; - gage = derive2 { name="gage"; version="2.24.0"; sha256="05kdc8pqjwhi9pl0pwm4rkisrdlkkrhnj0iwwya5vakgvh3bw42d"; depends=[AnnotationDbi graph KEGGREST]; }; - gaggle = derive2 { name="gaggle"; version="1.42.0"; sha256="1a04mzcamgw1k1s0s2n9myv9mj84lrb4mvlircnmpy6a7ag5d3lb"; depends=[graph rJava RUnit]; }; - gaia = derive2 { name="gaia"; version="2.18.0"; sha256="10wi2i8yqrcxjs7vp2dywrj4fqvgd3sd238bvy7kj5kvr24ajfd1"; depends=[]; }; - garfield = derive2 { name="garfield"; version="1.2.0"; sha256="09ijwqxmwq3432bkx4zi0c8h93nj3jd4jqyz5lm65hjn2slmwbfl"; depends=[]; }; - gaucho = derive2 { name="gaucho"; version="1.10.0"; sha256="13wavb2l3bdkd3yjsd9v53wfmylq7y19q70ybncyd6qr05mzqj07"; depends=[GA graph heatmap_plus png Rgraphviz]; }; - gcatest = derive2 { name="gcatest"; version="1.4.0"; sha256="0b365k1a8yrqnxrrm8iclgg06h1mcrbl6kfkj2rzsajg4ahx9gly"; depends=[lfa]; }; - gcrma = derive2 { name="gcrma"; version="2.46.0"; sha256="0yr1wcf32ihjpkb4swnnf933i0sbniyjswsvx9ly4z1dv8yigjji"; depends=[affy affyio Biobase BiocInstaller Biostrings XVector]; }; - gdsfmt = derive2 { name="gdsfmt"; version="1.10.1"; sha256="1mn7ircm2i9bfmxprbl2rdvwazngnv1jxdxpcdknl5c66j5lhzap"; depends=[]; }; - geNetClassifier = derive2 { name="geNetClassifier"; version="1.14.0"; sha256="1z3j12y97n8bc8nc9gjfs1bbmjbbwgkwfp7g14g11p3qfhlsjyzn"; depends=[Biobase e1071 EBarrays minet]; }; - geecc = derive2 { name="geecc"; version="1.8.0"; sha256="0yhi0a2141q93dxr26wr44724yyfh9bykr7swllql036nkdpfhvv"; depends=[gplots hypergea MASS Rcpp]; }; - genArise = derive2 { name="genArise"; version="1.50.0"; sha256="1f8ic85955v866sqc02b5m2rk8agws80w2rv7g4j7kk5ssffrv0r"; depends=[locfit tkrplot xtable]; }; - genbankr = derive2 { name="genbankr"; version="1.2.1"; sha256="1pcn4asxxzark6w5a188as3h5klwb6yj5varrf9lm6qdrhmdwimy"; depends=[Biobase BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges IRanges rtracklayer S4Vectors VariantAnnotation]; }; - geneAttribution = derive2 { name="geneAttribution"; version="1.0.1"; sha256="15vbi1fax2jwbh5j82vv3qlzhkscwd9qm3ls51rgbir72m915x3a"; depends=[BiocGenerics GenomeInfoDb GenomicFeatures GenomicRanges IRanges org_Hs_eg_db rtracklayer]; }; - geneRecommender = derive2 { name="geneRecommender"; version="1.46.0"; sha256="1ddj9w6jdbcxnzw22q8qjg6b0pydcin51h3n7l7crwa0d8wvmg6j"; depends=[Biobase]; }; - geneRxCluster = derive2 { name="geneRxCluster"; version="1.10.0"; sha256="18h5a9yb6h7lhz4yija3vx7ca8x4mvlji659kqzy7a7prm9yqi2w"; depends=[GenomicRanges IRanges]; }; - geneXtendeR = derive2 { name="geneXtendeR"; version="1.0.0"; sha256="104mn7rgsakc89gz3phsp00ijcw99zxbyd2q96s5ikz1c4pnf6bl"; depends=[data_table dplyr rtracklayer]; }; - genefilter = derive2 { name="genefilter"; version="1.56.0"; sha256="1vzgciqd09csqcw9qync8blsv51ylrd86a65iadgyy6j26g01fwd"; depends=[annotate AnnotationDbi Biobase S4Vectors survival]; }; - genefu = derive2 { name="genefu"; version="2.6.0"; sha256="0gh6n4k1b0f57w2lb1kjwymh5x8iirvrmhqlq46yybfs4928h147"; depends=[AIMS amap biomaRt iC10 limma mclust survcomp]; }; - geneplast = derive2 { name="geneplast"; version="1.0.0"; sha256="0sxvdnw4kdr2bikibhaf538qq5adr2cv4warbpmi28wjiyzs7jy1"; depends=[ape snow]; }; - geneplotter = derive2 { name="geneplotter"; version="1.52.0"; sha256="1p6yvxi243irhjxwm97hp73abhwampj0myyf8z00ij166674pc7h"; depends=[annotate AnnotationDbi Biobase BiocGenerics lattice RColorBrewer]; }; - genoCN = derive2 { name="genoCN"; version="1.26.0"; sha256="0v0sg2h9f3dqwydfvydbpjw37xzl2yn26244nyq8rzb1g5p30l6l"; depends=[]; }; - genomation = derive2 { name="genomation"; version="1.6.0"; sha256="1m4mz7wihj8yqivwkzw68div8ybk4rjsai3ffki7xp7sh21ax03y"; depends=[Biostrings BSgenome data_table GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridBase impute IRanges matrixStats plotrix plyr Rcpp readr reshape2 Rhtslib Rsamtools rtracklayer RUnit S4Vectors seqPattern]; }; - genomeIntervals = derive2 { name="genomeIntervals"; version="1.30.1"; sha256="0kglh50x76b4n0r6cfjk63bja1d1mdf5m14k7n6jjg6glprys3j5"; depends=[BiocGenerics GenomeInfoDb GenomicRanges intervals IRanges S4Vectors]; }; - genomes = derive2 { name="genomes"; version="3.4.0"; sha256="160279nd3iybpn6v1da9yr248fac865hg0dmxq32mbdhmp591xjy"; depends=[curl readr]; }; - genoset = derive2 { name="genoset"; version="1.30.0"; sha256="08vyiyipcnrw3r8cyk4yzynzby8gy5mn8v16s582wzc37kdj46yz"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges S4Vectors SummarizedExperiment]; }; - genotypeeval = derive2 { name="genotypeeval"; version="1.4.0"; sha256="057b36rjfcg45irl80c4rkiq2bkjyczdxvph6wyn6nfl657ki5k2"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges ggplot2 IRanges rtracklayer VariantAnnotation]; }; - genphen = derive2 { name="genphen"; version="1.2.0"; sha256="1czigszpqrvqqyrgn8jhifqq31i7qkbm7gq2i9h9x11qr0l421p2"; depends=[Biostrings e1071 effsize ggplot2 randomForest rjags]; }; - gespeR = derive2 { name="gespeR"; version="1.6.1"; sha256="1kk0c2hvvq1rbmkagnxsx03nd9jjnh3yci92fgb3y9vqa4gfps3n"; depends=[Biobase biomaRt cellHTS2 doParallel dplyr foreach ggplot2 glmnet Matrix reshape2]; }; - ggbio = derive2 { name="ggbio"; version="1.22.4"; sha256="1kjhxhhinl5h3h3yyb1miwy4kzngmdi418awvdiimrnj3412vvrg"; depends=[AnnotationDbi Biobase BiocGenerics Biostrings biovizBase BSgenome ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GGally ggplot2 gridExtra gtable Hmisc IRanges OrganismDbi reshape2 Rsamtools rtracklayer S4Vectors scales SummarizedExperiment VariantAnnotation]; }; - ggcyto = derive2 { name="ggcyto"; version="1.2.3"; sha256="03cb9zhpchg6ymyvp3gbma35sk81a3f7x3brkriwig74vv9x1hw5"; depends=[data_table flowCore flowWorkspace ggplot2 gridExtra ncdfFlow plyr RColorBrewer scales]; }; - ggtree = derive2 { name="ggtree"; version="1.6.11"; sha256="0lh6wj4bkmad2wrv6lpxz0qprhwxava6w8v0y6l3930026wj01q4"; depends=[ape ggplot2 jsonlite magrittr tidyr]; }; - girafe = derive2 { name="girafe"; version="1.26.0"; sha256="07d0j8px5zrb07agpsvhl5v1d2hdcavcqg0q57hs2jk4ysl98way"; depends=[Biobase BiocGenerics Biostrings genomeIntervals intervals IRanges Rsamtools S4Vectors ShortRead]; }; - globalSeq = derive2 { name="globalSeq"; version="1.2.0"; sha256="1laz11w4haiq4j754krcy3hlca2rmgwgcsy4vlc89lmfrc68pfmk"; depends=[]; }; - globaltest = derive2 { name="globaltest"; version="5.28.0"; sha256="0vxwhk6c2sxy46v7amnsgvgq4yy77z5mifb917649r0q4n3jaaaw"; depends=[annotate AnnotationDbi Biobase survival]; }; - gmapR = derive2 { name="gmapR"; version="1.16.0"; sha256="1afxlz1z6khc16ab62chnfzkm9y0vdfrfnmkdhrsqwr68lf3dh9d"; depends=[Biobase BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; - goProfiles = derive2 { name="goProfiles"; version="1.36.0"; sha256="1imwqla70j643w7h25da0f0c52szqk81z4g8vwpdpriq512d9gm9"; depends=[AnnotationDbi Biobase GO_db]; }; - goTools = derive2 { name="goTools"; version="1.48.0"; sha256="171picf9ic0z1lbpmyy8dkvglq75dnpzj39yzxkkinkbyzlnfhm2"; depends=[AnnotationDbi GO_db]; }; - goseq = derive2 { name="goseq"; version="1.26.0"; sha256="1xay2ay8whwsvy10wss07svc638gg4ks1qayskplvrwxkp2kg2p8"; depends=[AnnotationDbi BiasedUrn BiocGenerics geneLenDataBase GO_db mgcv]; }; - gpls = derive2 { name="gpls"; version="1.46.0"; sha256="1y12zzkf7knc1j8xh3kqax3jzlllwb8hyfqjnxxailad3gbxwc1x"; depends=[]; }; - gprege = derive2 { name="gprege"; version="1.18.0"; sha256="1gjcgy0bw87rgh3j8pq3940l7g6zzmwnzvkrrfviizny0p8ynxgn"; depends=[gptk]; }; - graph = derive2 { name="graph"; version="1.52.0"; sha256="0g3dk5vsdp489fmyg8mifczmzgqrjlakkkr8i96dj15gghp3l135"; depends=[BiocGenerics]; }; - graphite = derive2 { name="graphite"; version="1.20.1"; sha256="1lkknnjac5m5wvkvbz02548q16h6c5jhzhi410vr4lfzcz7v201a"; depends=[AnnotationDbi graph rappdirs]; }; - groHMM = derive2 { name="groHMM"; version="1.8.0"; sha256="0d91nyhqbi5hv3mgmr2z0g29wg2md26g0hyv5mgapmz20cd9zi4y"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS rtracklayer S4Vectors]; }; - gtrellis = derive2 { name="gtrellis"; version="1.6.0"; sha256="09hds0dcs7w94gl7zm5w94kxzv09dsggn8wqibhx3a0m4h515wz7"; depends=[circlize GenomicRanges GetoptLong IRanges]; }; - gwascat = derive2 { name="gwascat"; version="2.6.0"; sha256="11y1knppdqcnj4w0hs33g2kcpx4sy8anb2y7kjgjxrpj4wvzinz9"; depends=[AnnotationDbi AnnotationHub BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 gQTLstats graph Gviz Homo_sapiens IRanges Rsamtools rtracklayer S4Vectors snpStats SummarizedExperiment VariantAnnotation]; }; - h5vc = derive2 { name="h5vc"; version="2.8.1"; sha256="1c4scm9z1ckmp5cdc979a44vryraqq60bzgsn329aq92r0rpd4y2"; depends=[abind BatchJobs BiocParallel Biostrings GenomeInfoDb GenomicRanges ggplot2 gridExtra h5vcData IRanges reshape rhdf5 Rsamtools S4Vectors]; }; - hapFabia = derive2 { name="hapFabia"; version="1.16.1"; sha256="0j0iip9mdvksb2y83891mplmh18ajhpi6jmgrszp2kjjh3sfwicj"; depends=[Biobase fabia]; }; - hiAnnotator = derive2 { name="hiAnnotator"; version="1.8.0"; sha256="0v0js3wkcw5dlg01g5xgj0m0rzxg86y9mxxw72jy6vr8j78wkzci"; depends=[BSgenome dplyr foreach GenomicRanges ggplot2 iterators rtracklayer scales]; }; - hiReadsProcessor = derive2 { name="hiReadsProcessor"; version="1.10.0"; sha256="0krgb5139fl425vyz13vyzr1kiv06nysk511h4yiif4r4ggharif"; depends=[BiocGenerics BiocParallel Biostrings dplyr GenomicAlignments GenomicRanges hiAnnotator readxl rSFFreader sonicLength]; }; - hierGWAS = derive2 { name="hierGWAS"; version="1.4.0"; sha256="0gahm81v1gcwph2xm0p3il1pc3wp28z3ik8l0c8mvwwd3kn69cdw"; depends=[fastcluster fmsb glmnet]; }; - hopach = derive2 { name="hopach"; version="2.34.0"; sha256="01rxryijz762bcf4dzha0rfmf263svy86aq7a8zxmampb39k5a62"; depends=[Biobase BiocGenerics cluster]; }; - hpar = derive2 { name="hpar"; version="1.16.0"; sha256="19qx0abwmn7yl7ix6wad912d3xwvmrw13idvrrfwhwj481w7b2xw"; depends=[]; }; - htSeqTools = derive2 { name="htSeqTools"; version="1.22.0"; sha256="1g0a3fmywcrsv7p2lv7r22hfvv3mbhl43yl71bp84v53r7pb95vw"; depends=[Biobase BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges MASS S4Vectors]; }; - hyperdraw = derive2 { name="hyperdraw"; version="1.26.0"; sha256="1jvj19fq24fpj10i2gjvrb9vmf5b4wdz5xcbifkgkbwf8pb4jcci"; depends=[graph hypergraph Rgraphviz]; }; - hypergraph = derive2 { name="hypergraph"; version="1.46.0"; sha256="0g0hk5ykbxa0kmpmlmrw8qvvkxk8hhh1jcvx0hcbqkjmld1sgfkg"; depends=[graph]; }; - iASeq = derive2 { name="iASeq"; version="1.18.0"; sha256="16ranqshbcfmik400gwycv37h3azhksrh1hkv9s3s8kii1aydzrq"; depends=[]; }; - iBBiG = derive2 { name="iBBiG"; version="1.18.0"; sha256="1sz6yw0n6j8gz0rwwfinckgkcrynr6zp10vlwpfkrksnpwc2qw7i"; depends=[ade4 biclust xtable]; }; - iBMQ = derive2 { name="iBMQ"; version="1.14.0"; sha256="1g2lf38z2j5n922k7a7q5c04jz1nncyjxy7aiic305lnjmdhh91h"; depends=[Biobase ggplot2]; }; - iCARE = derive2 { name="iCARE"; version="1.2.0"; sha256="1yq1kp0jzf8jiwf7l8chn4lmvlzfhfwc78ivdlqydrl2xarvb725"; depends=[]; }; - iCOBRA = derive2 { name="iCOBRA"; version="1.2.0"; sha256="1nvfp09j3n689szrjlvnjhbp7bpma6b00mpkffvadcprgalb1j63"; depends=[dplyr DT ggplot2 limma reshape2 ROCR scales shiny shinyBS shinydashboard UpSetR]; }; - iCheck = derive2 { name="iCheck"; version="1.4.0"; sha256="1vara7v0811n6d3h9b3xwbw8hd8jlxkr7mb920m5v5l86rnd798y"; depends=[affy Biobase GeneSelectMMD gplots limma lmtest lumi MASS preprocessCore randomForest rgl scatterplot3d]; }; - iChip = derive2 { name="iChip"; version="1.28.0"; sha256="00scfxyklyzpmd7yqpzh1xbq9d6drngczkvhmzklvnwcwxicw6sg"; depends=[limma]; }; - iClusterPlus = derive2 { name="iClusterPlus"; version="1.10.0"; sha256="1qjr1d53xq4ad9d1fqx8cg0wf0br19ga1a7m7yrjmqxnjf82kfcc"; depends=[]; }; - iGC = derive2 { name="iGC"; version="1.4.0"; sha256="1zw9lqwvnmvgj2xvq6dhi7vs1lklkfpmhxf99hqbbr6km30gjq6a"; depends=[data_table plyr]; }; - iPAC = derive2 { name="iPAC"; version="1.18.0"; sha256="1m6c1ka7yx6ish9cw3kl683dp9zn3nbr4ii49b09lzjvxq6n2cbi"; depends=[Biostrings gdata multtest scatterplot3d]; }; - iSeq = derive2 { name="iSeq"; version="1.26.0"; sha256="07ri9w8i57jigfs7zlz35k6qcin5pipv7c4w9k7nxlrm43n6s7nd"; depends=[]; }; - ibh = derive2 { name="ibh"; version="1.22.0"; sha256="0k2pncvjc8zr4xxb4yqiphc8a02hsl2r2j6mflhzs7iw61z8rq4q"; depends=[simpIntLists]; }; - idiogram = derive2 { name="idiogram"; version="1.50.0"; sha256="13jhq6bd938rsyqfl3qjzryqx9pv6z2k7bya8r0vrjrzcssnasyh"; depends=[annotate Biobase plotrix]; }; - illuminaio = derive2 { name="illuminaio"; version="0.16.0"; sha256="0ysvblxbk3hdnd70l31f2qzg3qsrpdyix395zhqjz5hmviyy91q7"; depends=[base64]; }; - imageHTS = derive2 { name="imageHTS"; version="1.24.0"; sha256="0c5szadgyz53r9cj14gc5r1s3wkv68pi66dlg9gnnpqyfcfpsd8y"; depends=[Biobase cellHTS2 e1071 EBImage hwriter vsn]; }; - immunoClust = derive2 { name="immunoClust"; version="1.6.0"; sha256="0nmgvwccfnzpfd6x6x52qgxqi56348ljpdwhylflxbd1f4szqr58"; depends=[flowCore lattice]; }; - impute = derive2 { name="impute"; version="1.48.0"; sha256="1164zvnikbjd0ybdn9xwn520rlmdjd824vmhnl83zgv3v9lzp9bm"; depends=[]; }; - intansv = derive2 { name="intansv"; version="1.12.0"; sha256="0djcb8yzrppbawp5dvf45cj8j3g9z95kifzyk3ndz48vr62ksaav"; depends=[BiocGenerics GenomicRanges ggbio IRanges plyr]; }; - interactiveDisplay = derive2 { name="interactiveDisplay"; version="1.12.0"; sha256="1psai99wp2d4hchfm2m7bmy9hxwz0kfl1mc9xgq57k5vq8bdq7gc"; depends=[AnnotationDbi BiocGenerics Category ggplot2 gridSVG interactiveDisplayBase plyr RColorBrewer reshape2 shiny XML]; }; - interactiveDisplayBase = derive2 { name="interactiveDisplayBase"; version="1.12.0"; sha256="1gxa1sc2sk7xvxc4p74cwjkxdk3ns7igl51jg7a7086k729k3m8j"; depends=[BiocGenerics shiny]; }; - inveRsion = derive2 { name="inveRsion"; version="1.22.0"; sha256="1f35l6gnvs5kz0v4d2dhq6mdpkvknhzadzka2m0jdhhpdk1vqkq3"; depends=[haplo_stats]; }; - iontree = derive2 { name="iontree"; version="1.20.0"; sha256="1kvj73vzgrszvyyb0xlvc46ba58pznsczhxj8mxd6pp2sa3pjgbh"; depends=[rJava RSQLite XML]; }; - isobar = derive2 { name="isobar"; version="1.20.0"; sha256="171a3jphxwx7n9kw77c1wng6fbv1fm5qxlwxz8n8fbnr6z4n0k2b"; depends=[Biobase biomaRt distr ggplot2 plyr]; }; - isomiRs = derive2 { name="isomiRs"; version="1.2.0"; sha256="1dgbb9nlsjbjp06wsjnzml7laqi2353xk2pwi0kqhd6yqhrkcagz"; depends=[BiocGenerics DESeq2 DiscriMiner dplyr GenomicRanges GGally ggplot2 gplots gridExtra gtools IRanges plyr RColorBrewer readr reshape S4Vectors SummarizedExperiment tidyr]; }; - iterativeBMA = derive2 { name="iterativeBMA"; version="1.32.0"; sha256="1pkq48a8hsalfi9w1dcyzskbwzg1ba4dw5z3y11yb9fzxh9f5y7l"; depends=[Biobase BMA leaps]; }; - iterativeBMAsurv = derive2 { name="iterativeBMAsurv"; version="1.32.0"; sha256="112wv08b4c3qgfd7w3a61zi1nk2va5b7ip9ayfknvj15kzrxsy9j"; depends=[BMA leaps survival]; }; - joda = derive2 { name="joda"; version="1.22.0"; sha256="1f2a8jn9pvi1p3x9fvj78sxl5mvar0lss4zxpivqm376sz3h71hg"; depends=[bgmm RBGL]; }; - kebabs = derive2 { name="kebabs"; version="1.8.1"; sha256="086a7z992wrj73k7zrkxk9zcz37r8bbnrdqhf4b3jvd0cwck7vib"; depends=[apcluster Biostrings e1071 IRanges kernlab LiblineaR Matrix Rcpp S4Vectors XVector]; }; - keggorthology = derive2 { name="keggorthology"; version="2.26.0"; sha256="0r01hz6sra2h3irjy268y24hz0yzjzcdp8wxrj5qv103fahghjk1"; depends=[AnnotationDbi DBI graph hgu95av2_db]; }; - kimod = derive2 { name="kimod"; version="1.2.0"; sha256="1bylbi4pwk4khhgx7ffi2sa1vqvffkmzd2c09n0pws03gpjm77ic"; depends=[Biobase cluster]; }; - lapmix = derive2 { name="lapmix"; version="1.40.0"; sha256="1mgabcribl4jgm35ypy5rkmigzsq3vxk71i2j2jsvil48fwwpmw9"; depends=[Biobase]; }; - ldblock = derive2 { name="ldblock"; version="1.4.0"; sha256="090f1yf30mklvq1kgqq28dsr4qy1zv4b1jp0c8m4a46115d7f57x"; depends=[Matrix snpStats]; }; - les = derive2 { name="les"; version="1.24.0"; sha256="0736ymhiq4a6aq6439nigs475x08sw3msl4jzg5g594lbs3nxklb"; depends=[boot fdrtool gplots RColorBrewer]; }; - lfa = derive2 { name="lfa"; version="1.4.0"; sha256="1awfqd3pmzkljn19fvflxp5q8ilncamcl3hx7ns7d4r9r98d9a3s"; depends=[corpcor]; }; - limma = derive2 { name="limma"; version="3.30.13"; sha256="1ji8kb19anwq2505zii2kzqlrnk75mk1mpz8vy4s1mckzs1cz4m0"; depends=[]; }; - limmaGUI = derive2 { name="limmaGUI"; version="1.50.0"; sha256="19jiqpkqcchbrsqac9l8a9zrcn37qc02586kr1n8c9fayhr91iby"; depends=[AnnotationDbi BiocInstaller gcrma limma R2HTML tkrplot xtable]; }; - lmdme = derive2 { name="lmdme"; version="1.16.0"; sha256="033j6pz45wf9xzgjz25s9y7jyfc92srmispsy4m1apyb22gjazgs"; depends=[limma pls stemHypoxia]; }; - logicFS = derive2 { name="logicFS"; version="1.44.0"; sha256="0j7qwgxdqq2m1ffdp78xg875xi2drlv9im8mzjc9m9mxv45fmala"; depends=[LogicReg mcbiopi]; }; - logitT = derive2 { name="logitT"; version="1.32.0"; sha256="17r5zbf5lv13rcjlv6vw1qvqk7ha8gbqbcb957jvcdncjh1rrv72"; depends=[affy]; }; - lol = derive2 { name="lol"; version="1.22.0"; sha256="15q0kz4xhzj75qa3qsg2fck9w9c1s0n87dlasim35i89y56kyzki"; depends=[Matrix penalized]; }; - lpNet = derive2 { name="lpNet"; version="2.6.0"; sha256="1bfw7xp0dbx9kdg59x5jcwjwf8bjdqky6hvcpn2q4l9p6g9h72nn"; depends=[lpSolve nem]; }; - lpsymphony = derive2 { name="lpsymphony"; version="1.2.0"; sha256="142jynr4fs70zwc3plm4wcjki6sb3ampmy6wp1cxpb92jmdavc9y"; depends=[]; }; - lumi = derive2 { name="lumi"; version="2.26.4"; sha256="0k8d3xc1k53j0mlyy69j6dfkx9rkc305vnp72jk2k6b071ian1xw"; depends=[affy annotate AnnotationDbi Biobase DBI GenomicFeatures GenomicRanges KernSmooth lattice MASS methylumi mgcv nleqslv preprocessCore RSQLite]; }; - mAPKL = derive2 { name="mAPKL"; version="1.6.0"; sha256="0664mnmw5v6ifkrq61z4b3m3rw10133awds70h7m074qdkwl89ad"; depends=[AnnotationDbi apcluster Biobase clusterSim e1071 igraph limma multtest parmigene reactome_db]; }; - mBPCR = derive2 { name="mBPCR"; version="1.28.0"; sha256="1r3jv0a9xn564lmszcigpqqgfhckyjwbzzmxi632wj98cn7qj4f0"; depends=[Biobase oligoClasses SNPchip]; }; - mQTL_NMR = derive2 { name="mQTL.NMR"; version="1.8.0"; sha256="1a1v2wylv14rz96qwqrshkf63ll54bx7h6g3y6d9fy1qdfgncwgq"; depends=[GenABEL MASS outliers qtl]; }; - maCorrPlot = derive2 { name="maCorrPlot"; version="1.44.0"; sha256="11i2ri10gwmd6c9852z24v24f7hwcj378lmzxynrxqhz7825s1jr"; depends=[lattice]; }; - maPredictDSC = derive2 { name="maPredictDSC"; version="1.12.0"; sha256="0rf092xaw7jw1i0p57d725x4g0827yvgl29cj6qix92ssv3fjm92"; depends=[affy AnnotationDbi caret class e1071 gcrma hgu133plus2_db limma LungCancerACvsSCCGEO MASS ROC ROCR]; }; - maSigPro = derive2 { name="maSigPro"; version="1.46.0"; sha256="0i2p236ysmhvmpbs4zc1rsxgd9z2c1633kxljsnyq7wqrkf4hx7i"; depends=[Biobase MASS mclust venn]; }; - maanova = derive2 { name="maanova"; version="1.44.0"; sha256="094zbqwj97da540z03yxprdla3fbwwhcylpg3g92p4crnp7laaym"; depends=[Biobase]; }; - macat = derive2 { name="macat"; version="1.48.0"; sha256="1jwqq6x9nrjyl60vpnraa4n4hp3rqqr794yh6372bqjk4ini0pph"; depends=[annotate Biobase]; }; - made4 = derive2 { name="made4"; version="1.48.0"; sha256="1rmgyns0xvm6v7svlzbpkinc66cg0zr2h2lwsv4xnnva4zs5w8ns"; depends=[ade4 gplots RColorBrewer scatterplot3d]; }; - maftools = derive2 { name="maftools"; version="1.0.55"; sha256="1wyapzh1zzqs0v725k24wlzfwkx0ap8dd2pxaqaxbmk6pg70vn3d"; depends=[Biostrings changepoint cometExactTest ComplexHeatmap cowplot data_table DPpackage ggplot2 ggrepel mclust NMF RColorBrewer rjson Rsamtools VariantAnnotation wordcloud]; }; - maigesPack = derive2 { name="maigesPack"; version="1.38.0"; sha256="1g6my6nabm810q34cgrlmgdnvn93g968a7jyymgh8rs3gpj9gzgv"; depends=[convert graph limma marray]; }; - makecdfenv = derive2 { name="makecdfenv"; version="1.50.0"; sha256="0bkkpsq5mgnkbygp3f0rvzxnmbrbd9isfbdfgq8q4ch4hwsfba28"; depends=[affy affyio Biobase zlibbioc]; }; - manta = derive2 { name="manta"; version="1.20.0"; sha256="1gpvjmkf14jh7z5h96ixin783xaiznag1n0lp01iarz0412jvb86"; depends=[caroline edgeR Hmisc]; }; - marray = derive2 { name="marray"; version="1.52.0"; sha256="1d242pjas4vqqcgj2cb3p66n1n9va3bqph62nyg0kr95fy2y7nf7"; depends=[limma]; }; - maskBAD = derive2 { name="maskBAD"; version="1.18.0"; sha256="0y932wzga1crd0xrfjdap0pnji2fkaqfx68s016apx1x78k755ig"; depends=[affy gcrma]; }; - massiR = derive2 { name="massiR"; version="1.10.0"; sha256="0qnn4cpb0xa49cxaaf7a2i87m5np1hqa6wcsxslbmvvrfik8j11b"; depends=[Biobase cluster diptest gplots]; }; - matchBox = derive2 { name="matchBox"; version="1.16.0"; sha256="1pz8k1ygi59h4x2ykmvzqnwv44nryhqwpb3i4wg2bgm04nvd1kcz"; depends=[]; }; - matter = derive2 { name="matter"; version="1.0.1"; sha256="1yh2lgv1dw4cf62iy5il095v6zsa64dhdrpzn31b8aw4p5y7g2hw"; depends=[biglm BiocGenerics irlba S4Vectors]; }; - mcaGUI = derive2 { name="mcaGUI"; version="1.22.0"; sha256="0jmsf9vdv6nzqrzgmfgqvfgar9d1ziqp1qvj85pgsi1200n91rna"; depends=[bpca foreign gWidgets gWidgetsRGtk2 lattice MASS OTUbase proto vegan]; }; - mdgsa = derive2 { name="mdgsa"; version="1.6.0"; sha256="0r1zs60922pzf7n9z1sxx7599rmq4mas0frm1931a2r9rf78dwdw"; depends=[AnnotationDbi cluster DBI GO_db KEGG_db Matrix]; }; - mdqc = derive2 { name="mdqc"; version="1.36.0"; sha256="0fva73csci63xd4kp3nr2j3gllkkwfvp9dd0b581mfgkfa2p3khm"; depends=[cluster MASS]; }; - meshes = derive2 { name="meshes"; version="1.0.0"; sha256="0abqbsai946lm3dj7759q6crad3xj6919vgmnm5416sjnmfvk0v2"; depends=[AnnotationDbi DOSE GOSemSim MeSH_db]; }; - meshr = derive2 { name="meshr"; version="1.10.0"; sha256="170mpx0z9h4lxkl7b159nrbjl4vc2bdz92vfc6piwb3pmggg2r8r"; depends=[BiocGenerics Category cummeRbund fdrtool MeSH_Aca_eg_db MeSH_AOR_db MeSH_Bsu_168_eg_db MeSH_db MeSH_Hsa_eg_db MeSH_PCR_db MeSH_Syn_eg_db MeSHDbi org_Hs_eg_db S4Vectors]; }; - messina = derive2 { name="messina"; version="1.10.0"; sha256="1q3ikcq5pxbiahycbxgviry820p8498q2nh5wbdw5aq26cv00nak"; depends=[foreach ggplot2 plyr Rcpp survival]; }; - metaArray = derive2 { name="metaArray"; version="1.52.0"; sha256="0k9msa564981i0dc6fqsrcc3kpv58jjmkibpgn93c6966rxx76j2"; depends=[Biobase MergeMaid]; }; - metaCCA = derive2 { name="metaCCA"; version="1.2.0"; sha256="1d57h6a2idc5zrr8kn851b8ny2rsy1yhalrz5lch9xzl7ly5n5jc"; depends=[]; }; - metaMS = derive2 { name="metaMS"; version="1.10.0"; sha256="0f09cagf82by2wzb6gsi2wapwrgdymyhg37jnfalb00v0xhzzwwq"; depends=[BiocGenerics CAMERA Matrix robustbase xcms]; }; - metaSeq = derive2 { name="metaSeq"; version="1.14.0"; sha256="1jm79gd1wnyrcv8cj6ymiwj5g0b4r5p7l193zfh7v2y32ki0khq8"; depends=[NOISeq Rcpp snow]; }; - metabomxtr = derive2 { name="metabomxtr"; version="1.8.0"; sha256="1blxfg4ciad5rq1lxxj6i9hw1y7ljd60hqgp46hb2bdr97p4xq1r"; depends=[Biobase Formula multtest optimx plyr]; }; - metagene = derive2 { name="metagene"; version="2.6.1"; sha256="0zynw4bmid9m4n2v2vxy1ybbxgag7dhhf3vsipvxwn9dxfn28ls2"; depends=[BiocParallel DBChIP GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gplots IRanges matrixStats muStat R6 Rsamtools rtracklayer]; }; - metagenomeFeatures = derive2 { name="metagenomeFeatures"; version="1.4.0"; sha256="0sfh1zm2vkkw6gy4lkl21p33h530mff190mymf5ymj31g6ql44ag"; depends=[ape Biobase Biostrings dplyr lattice lazyeval magrittr metagenomeSeq purrr RSQLite ShortRead stringr]; }; - metagenomeSeq = derive2 { name="metagenomeSeq"; version="1.16.0"; sha256="14q96wsya19zv0ag06s9sqjq9azrh81kfim88aqvw8mp0vvc8k0x"; depends=[Biobase foreach glmnet gplots limma Matrix matrixStats RColorBrewer]; }; - metahdep = derive2 { name="metahdep"; version="1.32.0"; sha256="0qnimqg6zj2hq5a9ak39z3bv9da48k1191267rdbfn5rza910hwh"; depends=[]; }; - metaseqR = derive2 { name="metaseqR"; version="1.14.0"; sha256="1h5gg9dzn91si1ir2xbv8fsf9wdih8wxl01q83279x56ghf1sy8y"; depends=[baySeq biomaRt brew corrplot DESeq EDASeq edgeR gplots limma log4r NBPSeq NOISeq qvalue rjson vsn]; }; - methVisual = derive2 { name="methVisual"; version="1.26.0"; sha256="1dkknkr6z10i2ljfmgjb4sxn9vv46g26cf9nc7s47rbxbycjvlqw"; depends=[Biostrings ca gridBase gsubfn IRanges plotrix sqldf]; }; - methyAnalysis = derive2 { name="methyAnalysis"; version="1.16.1"; sha256="0rhjn2ql3c5m6ayj5mmgs8fb348nbxdsn2717x44a7aj3zamn9py"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt genefilter GenomeInfoDb GenomicFeatures GenomicRanges genoset Gviz IRanges lumi methylumi org_Hs_eg_db rtracklayer SummarizedExperiment VariantAnnotation]; }; - methylKit = derive2 { name="methylKit"; version="1.0.0"; sha256="1fxyarvz0vi4wbki70gqb1nwrmz6m7kgsvqh1am4j8m46qzv1h9a"; depends=[data_table emdbook fastseg GenomeInfoDb GenomicRanges gtools IRanges KernSmooth limma mclust qvalue R_utils Rcpp Rhtslib Rsamtools rtracklayer S4Vectors zlibbioc]; }; - methylMnM = derive2 { name="methylMnM"; version="1.12.0"; sha256="15669zficwabd3wdl3b24q3hal7d587k5lzg8s6sr3f3f9w2lyqf"; depends=[edgeR statmod]; }; - methylPipe = derive2 { name="methylPipe"; version="1.8.0"; sha256="1mfgxz43vxksvmwywh65q5v9jlcs5a43rb9w8zvjfgpg0zg8l46l"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicRanges gplots Gviz IRanges marray Rsamtools S4Vectors SummarizedExperiment]; }; - methylumi = derive2 { name="methylumi"; version="2.20.0"; sha256="02p1wwgz7w7qvsn08mw4ffrqwsi0kkahs7sdlm6ll0r7q3z03pkk"; depends=[annotate AnnotationDbi Biobase BiocGenerics FDb_InfiniumMethylation_hg19 genefilter GenomeInfoDb GenomicRanges ggplot2 illuminaio IRanges lattice matrixStats minfi reshape2 S4Vectors scales SummarizedExperiment]; }; - mgsa = derive2 { name="mgsa"; version="1.22.0"; sha256="1iwlqjs70hcgcr3m1k93xkl7xbqc9gw7k5ik9j9yhzsd7s8zxvpi"; depends=[gplots]; }; - miRLAB = derive2 { name="miRLAB"; version="1.4.0"; sha256="0lgkm4arfc37z11ilfc0wp8m4zm1dpigr01757r82ksaxc2iqv54"; depends=[energy entropy glmnet gplots Hmisc httr impute limma pcalg RCurl Roleswitch stringr]; }; - miRNAmeConverter = derive2 { name="miRNAmeConverter"; version="1.2.0"; sha256="0y4dmd6mlwyhi9k4nqfzg5x71k3x08cg0n4j0zrdqf5dby68yc3m"; depends=[AnnotationDbi DBI miRBaseVersions_db]; }; - miRNApath = derive2 { name="miRNApath"; version="1.34.0"; sha256="01yb8n3i5jkpmy5ksq8lrllaspdc6lyixz7zzndzrwrk0gibph3b"; depends=[]; }; - miRNAtap = derive2 { name="miRNAtap"; version="1.8.0"; sha256="0ap5c02m7j8mvvkxcw1mkxkwx7n8cslam1q4kj93pfpnn9bk2ll1"; depends=[AnnotationDbi DBI plyr RSQLite sqldf stringr]; }; - miRcomp = derive2 { name="miRcomp"; version="1.4.0"; sha256="0j07g3cvazxafvi3m0vp4rscivxydihdjkjy0fzqaxbgin2p35gj"; depends=[Biobase KernSmooth miRcompData]; }; - microRNA = derive2 { name="microRNA"; version="1.32.0"; sha256="0yyldx2icbr36m6n0kf1f156ixm0hbjnyzrw535d36sxhy1pplpb"; depends=[Biostrings]; }; - minet = derive2 { name="minet"; version="3.32.0"; sha256="1qk2xr88d7hc3ymg23byaqmnx3d2spddzwr81n48hwala8sy7apk"; depends=[infotheo]; }; - minfi = derive2 { name="minfi"; version="1.20.2"; sha256="1dj88a1mv74fp9pv3iqmvqvgvr91mwdwan6qzx0svi4gh5g5hx3n"; depends=[beanplot Biobase BiocGenerics Biostrings bumphunter data_table genefilter GenomeInfoDb GenomicRanges GEOquery illuminaio IRanges lattice limma MASS matrixStats mclust nlme nor1mix preprocessCore quadprog RColorBrewer reshape S4Vectors siggenes SummarizedExperiment]; }; - mirIntegrator = derive2 { name="mirIntegrator"; version="1.4.0"; sha256="0iq3223i8hl7jsgbnzz748j253n6rjvxw374g5bk1p4b0n4dcj5v"; depends=[AnnotationDbi ggplot2 graph org_Hs_eg_db Rgraphviz ROntoTools]; }; - missMethyl = derive2 { name="missMethyl"; version="1.8.0"; sha256="03wy0j8jr855kw87w7l4hd6cbk8n6iamyqnw0z2r9hf4dwd54v5v"; depends=[AnnotationDbi BiasedUrn GO_db IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest limma methylumi minfi org_Hs_eg_db ruv statmod stringr]; }; - mitoODE = derive2 { name="mitoODE"; version="1.12.0"; sha256="0jcc4rzc64sadanwgrg48dcsk3ibwsxka53h3wiz3yf8mlzq605a"; depends=[KernSmooth MASS minpack_lm mitoODEdata]; }; - mmnet = derive2 { name="mmnet"; version="1.12.0"; sha256="0fb9g4cizh0zf9gqwasygsc59njj6pffrmr5f0v96fmj3gvgfs1k"; depends=[Biobase flexmix ggplot2 igraph KEGGREST Matrix plyr RCurl reshape2 RJSONIO stringr XML]; }; - mogsa = derive2 { name="mogsa"; version="1.8.0"; sha256="1lw39c31n1k93i9a4rdpw03s3b638yplq8xlv4n6ac4bjy14q6l6"; depends=[Biobase BiocGenerics cluster corpcor genefilter gplots graphite GSEABase svd]; }; - monocle = derive2 { name="monocle"; version="2.2.0"; sha256="05nhkk7n6pz2p5gmr3siwawcbjmhcswqs49xx16ycf7bqj2hbfn7"; depends=[Biobase BiocGenerics cluster combinat DDRTree dplyr fastICA ggplot2 HSMMSingleCell igraph irlba limma MASS Matrix matrixStats pheatmap plyr proxy qlcMatrix reshape2 slam stringr VGAM]; }; - mosaics = derive2 { name="mosaics"; version="2.12.0"; sha256="01fvc0qc3fd8pjh6qjf9c1k4z0427gfx2li3jd7xp05nwyfbs68d"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges lattice MASS Rcpp Rsamtools S4Vectors]; }; - motifRG = derive2 { name="motifRG"; version="1.18.0"; sha256="1pa97aj6c5f3gx4bgriw110764dj3m9h104ddi8rv2bpy41yd98d"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 IRanges seqLogo XVector]; }; - motifStack = derive2 { name="motifStack"; version="1.18.0"; sha256="1h4qw89wqnl0r6drfi26h6jnvpjh5r45qc588g18rplgw3ckjmfz"; depends=[ade4 Biostrings grImport MotIV scales XML]; }; - motifbreakR = derive2 { name="motifbreakR"; version="1.4.0"; sha256="14mgwligzfwlg9asdr125wzg15j1rhg29xsv58r802q6r2prgryy"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges grImport Gviz IRanges matrixStats MotifDb motifStack rtracklayer S4Vectors stringr TFMPvalue VariantAnnotation]; }; - msPurity = derive2 { name="msPurity"; version="1.0.0"; sha256="0az2g69djc9kjzj10wgl0qpyyng6a8hzwa9ppwg66yj8da09x8zl"; depends=[doSNOW fastcluster foreach ggplot2 mzR plyr Rcpp reshape2 sapa stringr]; }; - msa = derive2 { name="msa"; version="1.6.0"; sha256="0i3cx1s5gg24dyik1mclhbpiqhxakc63fiazihdxn4k0bdg8ca9p"; depends=[BiocGenerics Biostrings IRanges Rcpp S4Vectors]; }; - msmsEDA = derive2 { name="msmsEDA"; version="1.12.0"; sha256="1l8clsma1rd322dfjr14klx0w5gjgn7fg21m4d4cyayyb44vsf1s"; depends=[gplots MASS MSnbase RColorBrewer]; }; - msmsTests = derive2 { name="msmsTests"; version="1.12.0"; sha256="12amngakmr4h3hl0nbladynn51r2zndcd0kxkm5cyhd90rrzs18i"; depends=[edgeR msmsEDA MSnbase qvalue]; }; - multiClust = derive2 { name="multiClust"; version="1.4.0"; sha256="1g8j8ad61njs1zbc2vrwbzp4lliapamzy9bd0cyhh520b55ziy8q"; depends=[amap cluster ctc dendextend mclust survival]; }; - multiscan = derive2 { name="multiscan"; version="1.34.0"; sha256="12ld46bm58lr95w7v7ynyhl6mw1ws9gbdr7afjdrs7ba4313qa0j"; depends=[Biobase]; }; - multtest = derive2 { name="multtest"; version="2.30.0"; sha256="0q302f3yf9v7mlq2kib7ynq015d5f94jrsk9drkp5vq0z5j0h3sw"; depends=[Biobase BiocGenerics MASS survival]; }; - muscle = derive2 { name="muscle"; version="3.16.0"; sha256="0rkv1gdbpk8sss1nlq19y7p2kba8hy3dh3bx5x1rzn9cn0qn16ig"; depends=[Biostrings]; }; - mvGST = derive2 { name="mvGST"; version="1.8.0"; sha256="19sn5rg3ny1ch5ka8agssn048wgj764cspzzj0pn3vf025qa9pbv"; depends=[annotate AnnotationDbi GO_db GOstats gProfileR graph Rgraphviz stringr topGO]; }; - mygene = derive2 { name="mygene"; version="1.10.0"; sha256="1qir3d378plqxwkz006vi00qb1zgj2m13sjcaxcclcg59fh1fh9m"; depends=[GenomicFeatures Hmisc httr jsonlite plyr S4Vectors sqldf]; }; - myvariant = derive2 { name="myvariant"; version="1.4.0"; sha256="0xlxcs0vqlwjqiwlycfznvj8n7sm54m3y287ndijs0461qkm2xil"; depends=[GenomeInfoDb Hmisc httr jsonlite magrittr plyr S4Vectors VariantAnnotation]; }; - mzID = derive2 { name="mzID"; version="1.12.0"; sha256="1zn896cpfvqp1qmq5c4vcj933hb8rxwb6gkck1wqvr7393rpqy1q"; depends=[doParallel foreach iterators plyr ProtGenerics XML]; }; - mzR = derive2 { name="mzR"; version="2.8.1"; sha256="0ipmhg6l3pf648rdx5g2ha7l5ppd3cja6afxhdw76x8ga3633x0r"; depends=[Biobase BiocGenerics ProtGenerics Rcpp zlibbioc]; }; - ncdfFlow = derive2 { name="ncdfFlow"; version="2.20.2"; sha256="0s8gd6wf20zxi8vs1bl1d75rmssgvkrgrndzxn56g8cxdnyg95hl"; depends=[BH Biobase BiocGenerics flowCore flowViz Rcpp RcppArmadillo zlibbioc]; }; - nem = derive2 { name="nem"; version="2.48.0"; sha256="00x0hb1h95dh9mg3wj89l3g2fh9hdbqlisylvmlmf7dzngcyn2c3"; depends=[boot e1071 graph limma plotrix RBGL RColorBrewer Rgraphviz statmod]; }; - netbenchmark = derive2 { name="netbenchmark"; version="1.6.0"; sha256="1f27n82kzwwqcpx71rv824lj1h9723vf9cjcp1djh6d8jpx6yx3a"; depends=[c3net corpcor fdrtool GeneNet grndata Matrix minet PCIT pracma randomForest Rcpp]; }; - netbiov = derive2 { name="netbiov"; version="1.8.0"; sha256="1yz9q8s1ls6944rwbmjmk6bzg0d16sxr93sw49vlzjqg1xydfc0x"; depends=[igraph]; }; - nethet = derive2 { name="nethet"; version="1.6.0"; sha256="04kpkff1kvxq060jx1fqg5vjszipzyjlshmr23ybm40lj31nl92k"; depends=[CompQuadForm GeneNet ggm ggplot2 glasso glmnet GSA huge ICSNP limma mclust multtest mvtnorm network parcor]; }; - netprioR = derive2 { name="netprioR"; version="1.0.0"; sha256="1ilpjkwnl81rv2xn2k3174jqp9jidm0fn4aajfybz0fbhzxi5r8k"; depends=[doParallel dplyr foreach ggplot2 gridExtra Matrix pROC sparseMVN]; }; - netresponse = derive2 { name="netresponse"; version="1.34.0"; sha256="15gq1x7ksmr5slbbdv0cfpk5nkibpq0b6mkpda0f4rg58zq0nsb6"; depends=[dmt ggplot2 graph igraph mclust minet plyr qvalue RColorBrewer reshape2 Rgraphviz]; }; - networkBMA = derive2 { name="networkBMA"; version="2.12.0"; sha256="1ccs0ardxa7d6b8jlkrnrs2idbf3bg7610zwjdg3p25da1f9gpn0"; depends=[BH BMA Rcpp RcppArmadillo RcppEigen]; }; - nnNorm = derive2 { name="nnNorm"; version="2.38.0"; sha256="1mdgbmdhqc1mjhjjhx8g0x6jy4pzza13f083c7wb9hhh7mi5w5jp"; depends=[marray nnet]; }; - nondetects = derive2 { name="nondetects"; version="2.4.0"; sha256="06jraad50df9kw4sl44qs3km1ba4nfvqkkzf0ghmrs624msyl4xx"; depends=[Biobase HTqPCR limma mvtnorm]; }; - normalize450K = derive2 { name="normalize450K"; version="1.2.0"; sha256="0h9dqm1n7kmaydjxhn9m9gw2kfwr98aa3nil32x32qsx9rsf5yk0"; depends=[Biobase illuminaio quadprog]; }; - normr = derive2 { name="normr"; version="1.0.0"; sha256="0ad2nbyngpigx7gy9nnpifjcz33bd8vkpggjl80vp5w4swj9vkrp"; depends=[bamsignals GenomeInfoDb GenomicRanges IRanges qvalue Rcpp rtracklayer]; }; - npGSEA = derive2 { name="npGSEA"; version="1.10.0"; sha256="1w4v4b53rdg4g8zw8hbcvw3z2x7i3f4kn9i68ql7f9p7ba21qr2p"; depends=[Biobase BiocGenerics GSEABase]; }; - nucleR = derive2 { name="nucleR"; version="2.6.0"; sha256="0aa2hi3pscjypys1zf1qdzzxsxkaj7myrja3932kb2vjnydk6da7"; depends=[Biobase BiocGenerics GenomicRanges IRanges Rsamtools S4Vectors ShortRead]; }; - nucleoSim = derive2 { name="nucleoSim"; version="1.2.0"; sha256="0j65i9yah3v3iidrndka05rfabgah7yk2d2fg1rqkw2nkyv47shk"; depends=[IRanges S4Vectors]; }; - nudge = derive2 { name="nudge"; version="1.40.0"; sha256="0ggbj3bjxjklw6944icgjcy3mgcly6b7d5cl68yn1cyagmdfdl63"; depends=[]; }; - occugene = derive2 { name="occugene"; version="1.34.0"; sha256="0qavm0wkhaq2vlrbqwb5yr79251m9nxlv4kj3bhhkdf0azzjpxmp"; depends=[]; }; - odseq = derive2 { name="odseq"; version="1.2.0"; sha256="1bf9s0vvgvq44p37396jj7wis6isj07mips52hmq299s7r5zl6gp"; depends=[kebabs mclust msa]; }; - oligo = derive2 { name="oligo"; version="1.38.0"; sha256="1lpdqyraamyqdz9dc56xpdph4sbx7fa4ngvdg407nblbqxbyyz3d"; depends=[affxparser affyio Biobase BiocGenerics Biostrings DBI ff oligoClasses preprocessCore RSQLite zlibbioc]; }; - oligoClasses = derive2 { name="oligoClasses"; version="1.36.0"; sha256="0cs8hkiz1rmp17hf1zsc2g1zwq7ah7x3bxbjapwgy6s12f68x2g9"; depends=[affyio Biobase BiocGenerics BiocInstaller Biostrings ff foreach GenomicRanges IRanges RSQLite S4Vectors SummarizedExperiment]; }; - omicade4 = derive2 { name="omicade4"; version="1.14.0"; sha256="0z6fvr4qq2bi0lpprs5fwv7lg501pgq648pd9af6w0km5ij7hrcf"; depends=[ade4 made4]; }; - oneChannelGUI = derive2 { name="oneChannelGUI"; version="1.40.0"; sha256="0x1g8f2aw95yvkc2mr9998wk3xmrzraaw4zp95kp21avv196kswh"; depends=[affylmGUI Biobase Biostrings chimera IRanges Rsamtools siggenes tkrplot tkWidgets]; }; - ontoCAT = derive2 { name="ontoCAT"; version="1.26.0"; sha256="1p6kgdv9h9hd87ccbvgz8l8vkmn7j9bvmq4wjvz4si5pwjghsz4l"; depends=[rJava]; }; - openCyto = derive2 { name="openCyto"; version="1.12.1"; sha256="07nv87c578dgacld01dzvnj8sba5f6yll5d3v3754zswnl7glk4j"; depends=[Biobase clue data_table flowClust flowCore flowStats flowViz flowWorkspace graph gtools ks lattice MASS ncdfFlow plyr R_utils RBGL RColorBrewer Rcpp rrcov]; }; - oposSOM = derive2 { name="oposSOM"; version="1.12.0"; sha256="1hfyr7sbwr9wyhan71mr8l22qkl5q5pm09n6rbbsy1z3wfd4yj9k"; depends=[ape Biobase biomaRt fastICA fdrtool igraph KernSmooth pixmap scatterplot3d som]; }; - oppar = derive2 { name="oppar"; version="1.2.0"; sha256="12bdfckimhrwx0zvgjm0lq320h5b6n8a8gwj50kz75fdqg7zjw0v"; depends=[Biobase GSEABase GSVA]; }; - pRoloc = derive2 { name="pRoloc"; version="1.14.6"; sha256="15g28asmk65vzrdm9cnq083vr7vcl76z2zw7j61mnlb73z1y3vqg"; depends=[Biobase BiocGenerics BiocParallel biomaRt caret class dendextend e1071 FNN ggplot2 gtools kernlab knitr lattice MASS mclust MLInterfaces MSnbase mvtnorm nnet plyr proxy randomForest RColorBrewer Rcpp RcppArmadillo sampling scales]; }; - pRolocGUI = derive2 { name="pRolocGUI"; version="1.8.2"; sha256="0zw89sdy0y1hxydkglscn3xx29yna17a83w1c73ps4q30laybl6a"; depends=[Biobase dplyr DT MSnbase pRoloc scales shiny]; }; - paircompviz = derive2 { name="paircompviz"; version="1.12.0"; sha256="0mwpgds5blylhh4ac24flzvpdp8xvky1yidmfafk002yf6pdk8i0"; depends=[Rgraphviz]; }; - pandaR = derive2 { name="pandaR"; version="1.6.0"; sha256="13fs3qa42z9bh8wfbfbfzhzq9z2rj6436caqd1flx7m4ibbww9fc"; depends=[Biobase BiocGenerics ggplot2 hexbin igraph matrixStats plyr reshape RUnit]; }; - panp = derive2 { name="panp"; version="1.44.0"; sha256="1pj9pgknfmrq8fnyk30hkn0mz1f3n6lv1dvvs7nywd8702wfyxhv"; depends=[affy Biobase]; }; - parglms = derive2 { name="parglms"; version="1.6.0"; sha256="0lqzvy0q6nlzm9k3ar70mqrvlkiw2ks2fi07bqcccmspvvkd25a6"; depends=[BatchJobs BiocGenerics doParallel foreach]; }; - parody = derive2 { name="parody"; version="1.32.0"; sha256="04n9ngqmdlm44bkhgwyk7a9rky7dcm8h3jy3m6nhz8lm6k6q72h3"; depends=[]; }; - pathRender = derive2 { name="pathRender"; version="1.42.0"; sha256="18bdli1sbb32kdza10lzf1mfd0dwlgkmbha20bjvcpd9jxxhl79z"; depends=[AnnotationDbi cMAP graph RColorBrewer Rgraphviz]; }; - pathVar = derive2 { name="pathVar"; version="1.4.0"; sha256="17332arpxdn9sh3lknrdnjc7dlp6qzjp0px82grkvfw9nqs0d4m3"; depends=[data_table EMT ggplot2 gridExtra Matching mclust]; }; - pathifier = derive2 { name="pathifier"; version="1.12.0"; sha256="132yhr43y88kz2qaadkw3hxbrjawk76hiy0h7y72h33zmz4l5z26"; depends=[princurve R_oo]; }; - pathview = derive2 { name="pathview"; version="1.14.0"; sha256="1nlfh2i1gj1f35z9v95yajvpp1p60z0pgjbc9xyvdg82s58ggjvd"; depends=[AnnotationDbi graph KEGGgraph KEGGREST org_Hs_eg_db png Rgraphviz XML]; }; - paxtoolsr = derive2 { name="paxtoolsr"; version="1.8.0"; sha256="09z7w9mp2f710y5rf83gqw490axvsg6xgqq05n44r21741rblxdf"; depends=[data_table httr igraph plyr R_utils rJava rjson XML]; }; - pbcmc = derive2 { name="pbcmc"; version="1.2.2"; sha256="0p7gacnbgf65iz9h7hfyybyak595ykl4xlfv4jvz4hpigbq8alzc"; depends=[Biobase BiocGenerics BiocParallel cowplot genefu ggplot2 gridExtra limma reshape2]; }; - pcaExplorer = derive2 { name="pcaExplorer"; version="2.0.0"; sha256="00zak0j907wrpr4ng6lxj4fki3lg8kgx6j8y7vxiib7dd01sw2fp"; depends=[AnnotationDbi biomaRt d3heatmap DESeq2 DT genefilter GenomicRanges ggplot2 ggrepel GO_db GOstats IRanges knitr limma NMF pheatmap plyr rmarkdown S4Vectors scales shiny shinyAce shinyBS shinydashboard SummarizedExperiment threejs tidyr topGO]; }; - pcaGoPromoter = derive2 { name="pcaGoPromoter"; version="1.18.0"; sha256="1xh7dwskik3q3npwhz2jgmpadh59q04hz6rd6fpph470d98213pm"; depends=[AnnotationDbi Biostrings ellipse]; }; - pcaMethods = derive2 { name="pcaMethods"; version="1.66.0"; sha256="18mawhxw57pgpn87qha4mwki24gqja7wpqha8q496476vyap11xw"; depends=[Biobase BiocGenerics MASS Rcpp]; }; - pcot2 = derive2 { name="pcot2"; version="1.42.0"; sha256="0rqkclr272ss61nlcay1wk0fy904bgw9rkryx236p7087kmjbasi"; depends=[amap Biobase]; }; - pdInfoBuilder = derive2 { name="pdInfoBuilder"; version="1.38.0"; sha256="1vhb37y8mfravdlvvsdnnxw3yjx6mf6x9wkj140s3bmrjyaabyxa"; depends=[affxparser Biobase BiocGenerics Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; - pdmclass = derive2 { name="pdmclass"; version="1.46.0"; sha256="1g88p9jrhllqxjy6043gm34h1lmyqxqyvifdlxz2afrc5h0g3rs8"; depends=[Biobase fibroEset mda]; }; - pepStat = derive2 { name="pepStat"; version="1.8.0"; sha256="1r7a10dhicq2lhk3g1yqz6q5wv0a9dwsl7pvxzhds1ix980a4rm9"; depends=[Biobase data_table fields GenomicRanges ggplot2 IRanges limma plyr]; }; - pepXMLTab = derive2 { name="pepXMLTab"; version="1.8.0"; sha256="0bgr2v9hj6lvwn2r1m5bfa20bxbk1zibysmr2cnzr8qxvlcpi354"; depends=[XML]; }; - phenoDist = derive2 { name="phenoDist"; version="1.22.0"; sha256="0945wxmf1dr6hp8pjc995nhisdnzc0rjwlpkfkw93dn10gn947w8"; depends=[e1071 imageHTS]; }; - phenoTest = derive2 { name="phenoTest"; version="1.23.1"; sha256="1nlgzzh8ddrk943vgna9ngdha60zmpn8zmbb4sxy8sya4n1z097v"; depends=[annotate AnnotationDbi Biobase biomaRt BMA Category ellipse genefilter ggplot2 gplots GSEABase Heatplus hgu133a_db Hmisc hopach HTSanalyzeR limma mgcv SNPchip survival xtable]; }; - philr = derive2 { name="philr"; version="1.0.0"; sha256="0k0ck7miirmwincp1fxcmdgfbcfdvyhgpmgxv5d4nlsasr3sf9n5"; depends=[ape ggplot2 ggtree phangorn tidyr]; }; - phyloseq = derive2 { name="phyloseq"; version="1.19.1"; sha256="19vq14gqr5wwkgbp1qdvz704ilhwvdfn7m8yzfcr6xcdxxks0gad"; depends=[ade4 ape Biobase BiocGenerics biomformat Biostrings cluster data_table foreach ggplot2 igraph multtest plyr reshape2 scales vegan]; }; - piano = derive2 { name="piano"; version="1.14.5"; sha256="1y6vy7fh23mpa2r65mhygaj27zwjl9v3khkff80lsaax0cc287s7"; depends=[Biobase BiocGenerics fgsea gplots igraph marray relations]; }; - pickgene = derive2 { name="pickgene"; version="1.46.0"; sha256="0lcgfw8w08akrkqb74ibavav9ph5pd1daa3zbdrxkycxqxylwcmm"; depends=[MASS]; }; - pint = derive2 { name="pint"; version="1.24.0"; sha256="1q0j037z4rq7z2yd76rnspg0xarbnblbhssm338hvh84l3kyhsvj"; depends=[dmt Matrix mvtnorm]; }; - pkgDepTools = derive2 { name="pkgDepTools"; version="1.40.0"; sha256="1r1z4ksjjd0av85jwfvawfv4j5jkjvglf03h55zixg8iwhcgrmz1"; depends=[graph RBGL]; }; - plateCore = derive2 { name="plateCore"; version="1.32.0"; sha256="123r9qcqan3bcqpzgw34dnrf1dgl28x01clc0j4rr61zxakapbq1"; depends=[Biobase flowCore flowStats flowViz lattice latticeExtra MASS robustbase]; }; - plethy = derive2 { name="plethy"; version="1.12.1"; sha256="0q8xqk123rm1sj4knljaaz97hl0pshf8m7f99kggna0hc33hgz60"; depends=[Biobase BiocGenerics DBI ggplot2 IRanges plyr RColorBrewer reshape2 RSQLite S4Vectors Streamer]; }; - plgem = derive2 { name="plgem"; version="1.46.0"; sha256="16g433rh7avqml7dlil8hm8a1ksmgfansck26r3hcg2ic9ys1gly"; depends=[Biobase MASS]; }; - plier = derive2 { name="plier"; version="1.44.0"; sha256="0iyazrna17qc5pk4lfxqmzwhhjxpjnli8ks6v7xf8c620ydrfdlm"; depends=[affy Biobase]; }; - plrs = derive2 { name="plrs"; version="1.14.0"; sha256="084vc0570ccl1hbp3gjp6mdk1x6qzxipyzwdh76ffahafg1lyk5s"; depends=[Biobase BiocGenerics CGHbase ic_infer marray quadprog Rcsdp]; }; - plw = derive2 { name="plw"; version="1.34.0"; sha256="1r5b2rpzhl5xj7477saac2j1qjdrcbdd3hrsi01hfsapczggz7sl"; depends=[affy MASS]; }; - pmm = derive2 { name="pmm"; version="1.6.0"; sha256="19v4cbc6ws84pa5byxam3cgdbmdd6qm44m1x62iz9hsmbx38fsg6"; depends=[lme4]; }; - podkat = derive2 { name="podkat"; version="1.6.1"; sha256="01kk7j2kvb15803dgyszjardy2mb8hii7f2c08x5whbprajx1h06"; depends=[Biobase BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp Rsamtools]; }; - polyester = derive2 { name="polyester"; version="1.10.1"; sha256="1z011zvj1jzr2diznp528skhxafngk26i080fvyc9vpviabpbl3l"; depends=[Biostrings IRanges limma logspline S4Vectors zlibbioc]; }; - ppiStats = derive2 { name="ppiStats"; version="1.40.0"; sha256="1ymyn5gf2879gb20q9aczw056ib5c7c0lhpap6f4iyxivz9lpbhq"; depends=[Biobase Category graph lattice ppiData RColorBrewer ScISI]; }; - pqsfinder = derive2 { name="pqsfinder"; version="1.2.3"; sha256="0d497y179r9yk43sh03vbanv1ilpp43a0zxj33fjnmm0cfc6w8cx"; depends=[BH Biostrings GenomicRanges IRanges Rcpp S4Vectors]; }; - prada = derive2 { name="prada"; version="1.50.0"; sha256="1nng189vl5xykba2gahmf88sb5fx9v980bhpy419anif26hx5fdl"; depends=[Biobase BiocGenerics MASS RColorBrewer rrcov]; }; - prebs = derive2 { name="prebs"; version="1.14.0"; sha256="0jkvpa5dvgvdln8bzd3cf4i5ki3mpf7n9353x0ba482p1qk3ip5z"; depends=[affy Biobase GenomeInfoDb GenomicAlignments GenomicRanges IRanges RPA S4Vectors]; }; - predictionet = derive2 { name="predictionet"; version="1.20.0"; sha256="0c988g47nw91rv62kc6rnxvmym7xxfr4gdlj339wy70w52yjf8vk"; depends=[catnet igraph MASS penalized RBGL]; }; - preprocessCore = derive2 { name="preprocessCore"; version="1.36.0"; sha256="1n8y12q7145f385gm2k3c6y3vwvin7jlb47la4mnl7mar6pq9kmp"; depends=[]; }; - proBAMr = derive2 { name="proBAMr"; version="1.8.0"; sha256="1kdaxyx0y3p4zvs589q4svb8h1xjsw2sccm3287rdj6a6wp4z5km"; depends=[AnnotationDbi Biostrings GenomicFeatures GenomicRanges IRanges rtracklayer]; }; - proFIA = derive2 { name="proFIA"; version="1.0.10"; sha256="18ncxwzgyvq4ks2y0sqvm01fsw8xfvri9h5nm0446ailjwg64mj9"; depends=[Biobase BiocParallel FNN minpack_lm pracma xcms]; }; - procoil = derive2 { name="procoil"; version="2.2.0"; sha256="1ffjrn2fg2z48c5lrabma34zyvm75fqngndxfd4g216znyzll2dn"; depends=[Biostrings kebabs S4Vectors]; }; - profileScoreDist = derive2 { name="profileScoreDist"; version="1.2.0"; sha256="1b1mvh6aw9k72qxjslb5qa42l70y9zz4r49kyxf48nfm8hgs2cj7"; depends=[BiocGenerics Rcpp]; }; - prot2D = derive2 { name="prot2D"; version="1.12.0"; sha256="0pdwkyqi0lplr12ayj9rrj09xhdbm7sjn821k4ilfbnxic3lldf2"; depends=[Biobase fdrtool impute limma MASS Mulcom qvalue samr st]; }; - proteinProfiles = derive2 { name="proteinProfiles"; version="1.14.0"; sha256="0xika21c4fadh4sxbn7kqjmmqpg85qxl3aynwfvl0qmk8xjpvdin"; depends=[]; }; - proteoQC = derive2 { name="proteoQC"; version="1.10.0"; sha256="0396qp0jzyz1ss3ahcxbqpxgsn1rwiy87zmrfr3wl22gs44vijrv"; depends=[ggplot2 MSnbase Nozzle_R1 plyr Rcpp reshape2 rTANDEM seqinr VennDiagram XML]; }; - psichomics = derive2 { name="psichomics"; version="1.0.8"; sha256="15v689jcc8d107cp9chzyh4bx01x5639lf474bl2ac9jlqca3mb3"; depends=[AnnotationHub data_table digest dplyr DT fastmatch highcharter httr jsonlite miscTools plyr R_utils shiny shinyBS shinyjs stringr survival Sushi XML]; }; - psygenet2r = derive2 { name="psygenet2r"; version="1.7.4"; sha256="0553fbkbfylqk7z4rw7m4sdyddgwh5qv0rgkp0crnj0cp49cmvnc"; depends=[BgeeDB Biobase BiocInstaller biomaRt ggplot2 igraph labeling RCurl reshape2 stringr topGO]; }; - puma = derive2 { name="puma"; version="3.16.0"; sha256="0692cvv6v58dpi0phrh5zfraw090mc83cwpnqibgi3w7kigq5zl7"; depends=[affy affyio Biobase mclust oligo oligoClasses]; }; - pvac = derive2 { name="pvac"; version="1.22.0"; sha256="1hhd87fh688r03l15f1m8rsaglcnqm6lzkb1lg002lzm8ghnzq81"; depends=[affy Biobase]; }; - pvca = derive2 { name="pvca"; version="1.14.0"; sha256="1z71i79hq8n139xpqvwz03r8arpscimy4p8ms77q7q3pcxb0rs94"; depends=[Biobase lme4 Matrix vsn]; }; - pwOmics = derive2 { name="pwOmics"; version="1.6.0"; sha256="1iq3aw9l2r3fc0kv0pj70yh8c729rb39v51hcy1bc5syfasr7shr"; depends=[AnnotationDbi AnnotationHub Biobase BiocGenerics biomaRt data_table GenomicRanges gplots igraph rBiopaxParser STRINGdb]; }; - qcmetrics = derive2 { name="qcmetrics"; version="1.12.0"; sha256="0s2p02j1v41hg5yrryi7lf819hhfv1wrdi58wxxff4m69qzzypzg"; depends=[Biobase knitr Nozzle_R1 pander S4Vectors xtable]; }; - qpcrNorm = derive2 { name="qpcrNorm"; version="1.32.0"; sha256="1q7w247r2ac4nqr262mc15q54ak0zdpw6a1sl0p7hiqcj1bc60f8"; depends=[affy Biobase limma]; }; - qpgraph = derive2 { name="qpgraph"; version="2.8.3"; sha256="02isqzh92dw6xr8wjb2nigfkk5lxmywm09p5ywffx4fvjl1bvs4f"; depends=[annotate AnnotationDbi Biobase BiocParallel GenomeInfoDb GenomicFeatures GenomicRanges graph IRanges Matrix mvtnorm qtl Rgraphviz S4Vectors]; }; - qrqc = derive2 { name="qrqc"; version="1.28.0"; sha256="0yl5q6c2yfizc9kaxdksc0zyl88xyy2i5m9qhcjkvzw71nlhihlj"; depends=[Biostrings biovizBase brew ggplot2 plyr reshape Rsamtools testthat xtable]; }; - qsea = derive2 { name="qsea"; version="1.0.3"; sha256="1r3b90ibhvrg98xji81rdfazvk7a2ib622dga7gvpqax0rs1np8i"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges gtools HMMcopy IRanges limma Rsamtools rtracklayer zoo]; }; - quantro = derive2 { name="quantro"; version="1.8.0"; sha256="0y33mx9nvi7k2w6qzal2z0jav1c68m9rkiqx7g22rjhisg2vynvi"; depends=[Biobase doParallel foreach ggplot2 iterators minfi RColorBrewer]; }; - quantsmooth = derive2 { name="quantsmooth"; version="1.40.0"; sha256="0bxy8rj5bflk9qv672rn9yr9lmk8z5a5lakgcamisbf28s6d3qkm"; depends=[quantreg]; }; - qusage = derive2 { name="qusage"; version="2.6.1"; sha256="1npv86c0z2ka2r3w4dydf843lhx6fsyyhxx268dnpv604rm0f662"; depends=[Biobase limma lsmeans nlme]; }; - qvalue = derive2 { name="qvalue"; version="2.6.0"; sha256="1dijh11v1kr29gnikq09pkdvm3qwmp1a406ahx9l4j6mgn8hlsfq"; depends=[ggplot2 reshape2]; }; - r3Cseq = derive2 { name="r3Cseq"; version="1.20.0"; sha256="039p2chdxcikjd58ighdd5vh6hp9mb3w169az0m9asrys4wgkps0"; depends=[Biostrings data_table GenomeInfoDb GenomicRanges IRanges qvalue RColorBrewer Rsamtools rtracklayer sqldf VGAM]; }; - rBiopaxParser = derive2 { name="rBiopaxParser"; version="2.14.0"; sha256="1a3c1yk57rmmsxwfkmgjvkfh3vs7aq71h6iwcihyvp2b15xdg8wp"; depends=[data_table XML]; }; - rCGH = derive2 { name="rCGH"; version="1.4.0"; sha256="0hh36zfmy7284528lfgf103r7f0839hxzr2z75gmsjjvr3c4q8vb"; depends=[aCGH affy AnnotationDbi DNAcopy GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges lattice limma mclust org_Hs_eg_db plyr shiny TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; }; - rDGIdb = derive2 { name="rDGIdb"; version="1.0.0"; sha256="0ix6j1m9bcllblwivv0i3m5mns787kpzpmx8kvb8bw4qd3lb09hq"; depends=[httr jsonlite]; }; - rGADEM = derive2 { name="rGADEM"; version="2.22.0"; sha256="1n673zr7g27fdksikk945krc539bnyvi3awabaifc57ldzj0hz1v"; depends=[Biostrings BSgenome IRanges seqLogo]; }; - rGREAT = derive2 { name="rGREAT"; version="1.6.0"; sha256="1q56cg6crgr95myk8pd7dmrhblcm4yl0n21dy126c0h38i6q5f5i"; depends=[GenomicRanges GetoptLong IRanges RCurl rjson]; }; - rHVDM = derive2 { name="rHVDM"; version="1.40.0"; sha256="1v410qv0djpf6cd90fjaidlifxcfv3l7s925ni9q4dqk8dr8x4y3"; depends=[affy Biobase minpack_lm R2HTML]; }; - rMAT = derive2 { name="rMAT"; version="3.24.0"; sha256="1s6lq7pc5g93qvwq79va9k6b2z2z65pf5hyya9bdjrr7q6bgd6fd"; depends=[affxparser Biobase BiocGenerics IRanges]; }; - rRDP = derive2 { name="rRDP"; version="1.8.0"; sha256="1z8m3036sarciw69pqhl5ib7prilbbwx43xv597byq03n45fgawq"; depends=[Biostrings]; }; - rSFFreader = derive2 { name="rSFFreader"; version="0.22.0"; sha256="1n9rzd3lpjzjbwpx1jvb68yymkr6k01y6a2jjyf7cdpdd9mpyg8s"; depends=[Biostrings IRanges S4Vectors ShortRead XVector]; }; - rTANDEM = derive2 { name="rTANDEM"; version="1.14.2"; sha256="1c9y3lf0ksmck7zw2qm6r3mnpgrmf6gpq471bzpyx8443cs7fj7h"; depends=[data_table Rcpp XML]; }; - rTRM = derive2 { name="rTRM"; version="1.12.0"; sha256="14ma36hx7hzaz903dzbmhzmipqlr3lnibjxr5y518wsml4ih70gi"; depends=[AnnotationDbi DBI igraph RSQLite]; }; - rTRMui = derive2 { name="rTRMui"; version="1.12.0"; sha256="0slp9yggz7yfhpil540k6d1ppkbmmbks1ssacj6xf5h4yksc6zh8"; depends=[MotifDb org_Hs_eg_db org_Mm_eg_db rTRM shiny]; }; - rain = derive2 { name="rain"; version="1.8.0"; sha256="1gqkh3rjr3h6l8y3s9rdc1j4ivnpx1hmhnlp6ay63y99q4yxgj8c"; depends=[gmp multtest]; }; - rama = derive2 { name="rama"; version="1.48.0"; sha256="0zmmilwhvh51fg0bi6jid27z38xr5yyqa0xa5kjwq3xh9pnrg17l"; depends=[]; }; - randPack = derive2 { name="randPack"; version="1.20.0"; sha256="0wby3nwhj5d4r98p14qfl3p2z4rb73bbpfh68zf75gjaqvkm0j25"; depends=[Biobase]; }; - rbsurv = derive2 { name="rbsurv"; version="2.32.0"; sha256="1n067rk8jiwf56rm22h8jfngwg75hp0xg7hlx86yzsdffpkmmbbv"; depends=[Biobase survival]; }; - rcellminer = derive2 { name="rcellminer"; version="1.6.0"; sha256="1lmghcwrwdwknpsv2cq47yyaw09ishb0s7i29zs5c4ksvpmdhw5h"; depends=[Biobase fingerprint gplots rcdk rcellminerData shiny stringr]; }; - readat = derive2 { name="readat"; version="1.0.0"; sha256="0l89x1pb1c8kypdh2ka9bp9jwq8j19p34qnf2zzm34361amh90wz"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_sets assertive_types Biobase data_table dplyr magrittr openxlsx pathological reshape2 stringi SummarizedExperiment testthat tidyr]; }; - reb = derive2 { name="reb"; version="1.52.0"; sha256="1cg88gglzr5r5m0bq51fz2xabhrlk9rybvrbbdnd7ph2ss1jxkis"; depends=[Biobase idiogram]; }; - recount = derive2 { name="recount"; version="1.0.17"; sha256="1ffvpkzafqhy75j8r39l91lrm321yq73w5a929nngk82lwwd6dcf"; depends=[BiocParallel derfinder downloader GenomeInfoDb GenomicRanges GEOquery IRanges RCurl rentrez rtracklayer S4Vectors SummarizedExperiment]; }; - recoup = derive2 { name="recoup"; version="1.2.0"; sha256="1n5af8fbly8qdwn4ggysd01s15l26lkw9dh1mnmimhhi6wzz1brj"; depends=[BiocGenerics biomaRt circlize ComplexHeatmap GenomicAlignments GenomicRanges ggplot2 plyr rtracklayer]; }; - regionReport = derive2 { name="regionReport"; version="1.8.2"; sha256="0q59fhxa9a1cr75c6m4qmgpxrv8q1jj0k1zm76xbj6anri5cmprd"; depends=[DEFormats derfinder DESeq2 GenomeInfoDb GenomicRanges knitcitations knitr knitrBootstrap RefManageR rmarkdown S4Vectors SummarizedExperiment]; }; - regioneR = derive2 { name="regioneR"; version="1.6.2"; sha256="0mvwk2yjsdxda7w6f82dbj91i0zrr95ipglfyw9ndhl2ki8dka0i"; depends=[BSgenome GenomeInfoDb GenomicRanges IRanges memoise rtracklayer]; }; - regsplice = derive2 { name="regsplice"; version="1.0.0"; sha256="0kl8xsz4jph4jrj3yfnfaymhsrrmcxgfjjanbc3yfv6kj5pwjfcp"; depends=[BiocParallel edgeR glmnet limma S4Vectors SummarizedExperiment]; }; - rfPred = derive2 { name="rfPred"; version="1.12.0"; sha256="1bc5rj00mlayahqb6vla9ghq15676fscj9kqagp1x6ivpgxqkl65"; depends=[data_table GenomicRanges IRanges Rsamtools]; }; - rgsepd = derive2 { name="rgsepd"; version="1.6.0"; sha256="047svzia4f5qhcr6h0p0hfzshzmissdm9hg0pp4mfd6051nkdv5x"; depends=[AnnotationDbi biomaRt DESeq2 GO_db goseq gplots hash org_Hs_eg_db SummarizedExperiment]; }; - rhdf5 = derive2 { name="rhdf5"; version="2.18.0"; sha256="0pb04li55ysag30s7rap7nnivc0rqmgsmpj43kin0rxdabfn1w0k"; depends=[zlibbioc]; }; - riboSeqR = derive2 { name="riboSeqR"; version="1.8.0"; sha256="1196qh0vwnfwshccl725mbkf698dlyz4658cq7kpvyrpv56z5l90"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools]; }; - rnaSeqMap = derive2 { name="rnaSeqMap"; version="2.32.0"; sha256="0bxlc5lwxlnlbp2qj3gsdvbrb96c9dhmp3fjdnpdcjwbvwh9a2jn"; depends=[Biobase DBI DESeq edgeR GenomicAlignments GenomicRanges IRanges Rsamtools]; }; - rnaseqcomp = derive2 { name="rnaseqcomp"; version="1.4.0"; sha256="1q1lsf75nbwkn91lgwkpx4lsmg94v1lbwzq7glwai4766xkvd2nb"; depends=[RColorBrewer]; }; - roar = derive2 { name="roar"; version="1.10.0"; sha256="1hp2542vi0jqxqqin6gb5py5hvl06sn0x9ks4lb371sw0smps7ak"; depends=[BiocGenerics GenomeInfoDb GenomicAlignments GenomicRanges IRanges rtracklayer S4Vectors SummarizedExperiment]; }; - rols = derive2 { name="rols"; version="2.2.5"; sha256="0xc467hd2jzdhw73a97lvj5m2hv10w06l11yrqff13gkhch4d6mi"; depends=[Biobase httr jsonlite progress]; }; - ropls = derive2 { name="ropls"; version="1.6.2"; sha256="0piwi6l83a7lcgsv2561d71y7hm3j3g2ax6vq2h0izf6qrzj4nvy"; depends=[Biobase]; }; - rpx = derive2 { name="rpx"; version="1.10.2"; sha256="1814f3jdmbj2yyv8ll7lfnc6bcwbv5hn9i7wydf2xzvpi2954ijr"; depends=[RCurl XML]; }; - rqubic = derive2 { name="rqubic"; version="1.20.0"; sha256="1d5zbicb5lsqvbb0djaixi9i05q2caysa1pxnlbvf4pc3pjl2bzh"; depends=[biclust Biobase BiocGenerics]; }; - rsbml = derive2 { name="rsbml"; version="2.32.0"; sha256="13y47fkrq80c9s0y7rrvynr6y5df9cxr0i9zxksm27fvk7bq2rzh"; depends=[BiocGenerics graph]; }; - rtracklayer = derive2 { name="rtracklayer"; version="1.34.2"; sha256="1j3cyvg1wg1d9l0lkcjk3jn7pb96zi17nd1qsa5lglsimja19mpl"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicRanges IRanges RCurl Rsamtools S4Vectors XML XVector zlibbioc]; }; - sRAP = derive2 { name="sRAP"; version="1.14.0"; sha256="04nnkxb59s9qfv8kyvqc5kw8hd60c0qnpp9v8rl2iash3yng8xxb"; depends=[gplots pls qvalue ROCR WriteXLS]; }; - sSeq = derive2 { name="sSeq"; version="1.12.0"; sha256="0pawi0svlz3cfq14f81lkvfawa5vd59cbvk4nxgwpwwk1ldxrdiq"; depends=[caTools RColorBrewer]; }; - safe = derive2 { name="safe"; version="3.14.0"; sha256="1n2i36gg8iykcaxy4347il2hbjd4lzrygyzibj4l9a7xprfb05y0"; depends=[AnnotationDbi Biobase SparseM]; }; - sagenhaft = derive2 { name="sagenhaft"; version="1.44.0"; sha256="1j6y4bj156szbf454m4zmlcg1idzxq2vzis2vjl5awpm0jvgz6sa"; depends=[SparseM]; }; - sangerseqR = derive2 { name="sangerseqR"; version="1.10.0"; sha256="058la6zb2prgnf0vwy8fc4p7n13zpm1gr7fhsy4m9qknd4mdcvkz"; depends=[Biostrings shiny]; }; - sapFinder = derive2 { name="sapFinder"; version="1.12.0"; sha256="1fybnkzjg2jfjc4qzcr96ma75389x928110a2nmq8326xknwd6f1"; depends=[pheatmap Rcpp rTANDEM]; }; - savR = derive2 { name="savR"; version="1.12.0"; sha256="0h32mrnwls8bgq0h71vzhr29f56hpl1hgxi7sycz7hmzp9pxcfh8"; depends=[ggplot2 gridExtra reshape2 scales XML]; }; - scater = derive2 { name="scater"; version="1.2.0"; sha256="0pambafir3aqpgk7kdq5i2pn0278d97bn2qb9712c0jivw363whf"; depends=[Biobase BiocGenerics biomaRt data_table dplyr edgeR ggbeeswarm ggplot2 limma matrixStats plyr reshape2 rhdf5 rjson shiny shinydashboard tximport viridis]; }; - scde = derive2 { name="scde"; version="2.2.0"; sha256="1yhg9gd8qphnfk5x93hsxqhw6mc2v6kdrw1wlgb93njic0cfmv7b"; depends=[BiocParallel Cairo edgeR extRemes flexmix MASS mgcv nnet pcaMethods quantreg RColorBrewer Rcpp RcppArmadillo rjson RMTstat Rook]; }; - scran = derive2 { name="scran"; version="1.2.2"; sha256="02jlxxm3nwgdx3v4dxw7041c4klfalpbqx0qwj25pk4f0fn9xrak"; depends=[Biobase BiocGenerics BiocParallel dynamicTreeCut edgeR Matrix scater shiny statmod zoo]; }; - scsR = derive2 { name="scsR"; version="1.10.0"; sha256="143qn75g3kijbdx2f7yg0wxa8kakyv6w119fwnfqxgpswdgdz2hn"; depends=[BiocGenerics Biostrings ggplot2 hash IRanges plyr RColorBrewer sqldf STRINGdb]; }; - segmentSeq = derive2 { name="segmentSeq"; version="2.8.0"; sha256="1azbyabm0nsjq45z3p6xhbxs01b5prwnq384y5yp5f6akkr3i4h7"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors ShortRead]; }; - seq2pathway = derive2 { name="seq2pathway"; version="1.6.0"; sha256="0rr5fzbcyc32ciyx42kahn8f9fvk7sy6055i37ql8zk5msgrsdsw"; depends=[biomaRt GenomicRanges GSA nnet seq2pathway_data WGCNA]; }; - seqCNA = derive2 { name="seqCNA"; version="1.20.0"; sha256="0951qnwgh29w7ws7mjcsrrkavipjpryf0mf0z7bgnpzdlpvkf361"; depends=[adehabitatLT doSNOW GLAD seqCNA_annot]; }; - seqLogo = derive2 { name="seqLogo"; version="1.40.0"; sha256="18bajdl75h3039559d81rgllqqvnq8ygsfxfx081xphxs0v6xggy"; depends=[]; }; - seqPattern = derive2 { name="seqPattern"; version="1.6.0"; sha256="0lsa5pz36xapi3yiv78k3z286a5md5sm5g21pgfyg8zmhmkxr7y8"; depends=[Biostrings GenomicRanges IRanges KernSmooth plotrix]; }; - seqTools = derive2 { name="seqTools"; version="1.8.0"; sha256="18ld6syl85hsdzapgbh9dp2f5prprc64yr2yi5mwrlrsjpqzix00"; depends=[zlibbioc]; }; - seqbias = derive2 { name="seqbias"; version="1.22.0"; sha256="094scvmbcfamblqnc0k9daxym890lff1968xg2lfwfhc92sdnwyd"; depends=[Biostrings GenomicRanges Rsamtools zlibbioc]; }; - seqplots = derive2 { name="seqplots"; version="1.12.0"; sha256="09l0sks7hzsjv8bha7ric1jhpn65ql4957lh7qg1hfd4pifyamvp"; depends=[Biostrings BSgenome class DBI digest DT fields GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges jsonlite kohonen plotrix RColorBrewer reshape2 RSQLite rtracklayer S4Vectors shiny]; }; - sevenbridges = derive2 { name="sevenbridges"; version="1.4.9"; sha256="1cy53v8a4bsyhf84201p5fwbyjbmr2j0c3075rj0baqxydbp4fqv"; depends=[curl docopt dplyr httr jsonlite liftr miniUI objectProperties rstudioapi S4Vectors shiny stringr uuid yaml]; }; - shinyMethyl = derive2 { name="shinyMethyl"; version="1.10.0"; sha256="0i6gjg3kjafx7pf9jkmnka33zma2ifg7kl4m71ii4a3zafy384r7"; depends=[BiocGenerics IlluminaHumanMethylation450kmanifest matrixStats minfi RColorBrewer shiny]; }; - shinyTANDEM = derive2 { name="shinyTANDEM"; version="1.12.0"; sha256="1nay7lw325v0gfgnalypyw8dl8i5nc5dwfm3x7gk3cpz2k9f1n0f"; depends=[mixtools rTANDEM shiny xtable]; }; - sigPathway = derive2 { name="sigPathway"; version="1.42.0"; sha256="0bk2gnsli8gnw70qmsic1244h0fpy10xv8i5nns70m9hh600rssc"; depends=[]; }; - sigaR = derive2 { name="sigaR"; version="1.22.0"; sha256="1akjzr8h429ag2sys8kka3adrfx1b2145ag7anxyl125h2dfqh97"; depends=[Biobase CGHbase corpcor igraph limma marray MASS mvtnorm penalized quadprog snowfall]; }; - siggenes = derive2 { name="siggenes"; version="1.48.0"; sha256="1djhghhh4rgjwrfprj376zy77pw1h52j4g5v3jz58xy47a346ila"; depends=[Biobase multtest]; }; - sights = derive2 { name="sights"; version="1.0.0"; sha256="0j5gcpmv6g1b29a93sgmlrzvypfflk035rhbz578cl5ps9iqgbxy"; depends=[ggplot2 lattice MASS qvalue reshape2]; }; - signeR = derive2 { name="signeR"; version="1.0.1"; sha256="05mqk99c8clv1vak4f1w6q928g49lfmlmlq4v46yfrqjkrq1acll"; depends=[BiocGenerics Biostrings BSgenome class GenomicRanges nloptr NMF PMCMR Rcpp RcppArmadillo VariantAnnotation]; }; - sigsquared = derive2 { name="sigsquared"; version="1.6.0"; sha256="12dqrf4ffcaigrrk9rl7d66m7fk1fiinmqrjffl80viyknjvz710"; depends=[Biobase survival]; }; - similaRpeak = derive2 { name="similaRpeak"; version="1.6.0"; sha256="11apli0ak9givkw2r9185ckkn7zp7sjq01fvhpv3szlpli5kczkm"; depends=[GenomicAlignments R6 Rsamtools rtracklayer]; }; - simpleaffy = derive2 { name="simpleaffy"; version="2.50.0"; sha256="1gv6843dy1dzli1cvg5pl39kk8kg0cbcj4qcz4kc20n6zq6dx88q"; depends=[affy Biobase BiocGenerics gcrma genefilter]; }; - simulatorZ = derive2 { name="simulatorZ"; version="1.8.0"; sha256="0kw54dw4sfyxns3b78n116rxxl7yfqlaslbvmiksbqj1a2gnsifk"; depends=[Biobase BiocGenerics CoxBoost gbm GenomicRanges Hmisc IRanges S4Vectors SummarizedExperiment survival]; }; - sincell = derive2 { name="sincell"; version="1.6.0"; sha256="0hpzrigp6hppamffv0l9fn3xn187dyfbwx91az7hav04lc4slymv"; depends=[cluster entropy fastICA fields ggplot2 igraph MASS proxy Rcpp reshape2 Rtsne scatterplot3d statmod TSP]; }; - sizepower = derive2 { name="sizepower"; version="1.44.0"; sha256="0f8gaj0l47pcamml9wbzfrrv51cpclj91cqig6pyigjwqcxahi29"; depends=[]; }; - skewr = derive2 { name="skewr"; version="1.6.0"; sha256="1xk7vf8m90bshk3179ndis672rnvvl15p00dsfh9y4kvxz2skr4q"; depends=[IlluminaHumanMethylation450kmanifest IRanges methylumi minfi mixsmsn RColorBrewer wateRmelon]; }; - snapCGH = derive2 { name="snapCGH"; version="1.44.0"; sha256="02dkhid7cz9lxffpnrh5d88iyvv6g23yrr14w3vpa189l6n8qvff"; depends=[aCGH cluster DNAcopy GLAD limma tilingArray]; }; - snm = derive2 { name="snm"; version="1.22.0"; sha256="01rwb8z9wbf4zw5kh7mnxj9add4r1a3fldvb5n0rir0wyr6snqg5"; depends=[corpcor lme4]; }; - snpStats = derive2 { name="snpStats"; version="1.24.0"; sha256="1hkgjd12cz6rfm7w51dgc7cxvrsrqgc2byfinbp0d42rnc3600n2"; depends=[BiocGenerics Matrix survival zlibbioc]; }; - soGGi = derive2 { name="soGGi"; version="1.6.1"; sha256="03bdclygsbvahgx6klmmp3bzcq70kjicrwxjbc6gmpi9gqsyf6nd"; depends=[BiocGenerics BiocParallel Biostrings chipseq GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges preprocessCore reshape2 Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; - specL = derive2 { name="specL"; version="1.8.0"; sha256="07yp81v8ypbysfj881j97cl0qwsxy0yryyzr07by382iys9hdy4c"; depends=[DBI protViz Rcpp RSQLite seqinr]; }; - spikeLI = derive2 { name="spikeLI"; version="2.34.0"; sha256="1qaqf4f8vpnrdriz6pplbzjl2vjfhwqgrm528p3m9w48d3s1ccyy"; depends=[]; }; - spkTools = derive2 { name="spkTools"; version="1.30.0"; sha256="0fwz77q5xqddhxilbcrv5aq5bhw4i15b0m4bw3dsmw26m0xlwsrq"; depends=[Biobase gtools RColorBrewer]; }; - spliceR = derive2 { name="spliceR"; version="1.16.0"; sha256="1h4bbn20cfq5ml0rdy0gn5z4bqf82v6nd3y2zylni29f2gp1j3za"; depends=[cummeRbund GenomicRanges IRanges plyr RColorBrewer rtracklayer VennDiagram]; }; - spliceSites = derive2 { name="spliceSites"; version="1.22.1"; sha256="1fc4h0ssd0kapgmjfksf0k6zpn5z6gkfvmacgap1nqm8s4y3912z"; depends=[Biobase BiocGenerics Biostrings doBy IRanges rbamtools refGenome seqLogo]; }; - splicegear = derive2 { name="splicegear"; version="1.46.0"; sha256="0c8h9z525qv32d60q24x9crm1aqm511fr2c9ihwq5q7wx3wzi7bq"; depends=[annotate Biobase XML]; }; - splineTimeR = derive2 { name="splineTimeR"; version="1.2.0"; sha256="0wv0k4x6c3m2km0qkgsmb2rr1pj3mdzacqafvg3y8f8996nn4k7s"; depends=[Biobase FIs GeneNet GSEABase gtools igraph limma longitudinal]; }; - splots = derive2 { name="splots"; version="1.40.0"; sha256="1qby74smkq6v8lmknsinfmp4qphmndfbs9b8828h68x02j2cmp06"; depends=[RColorBrewer]; }; - spotSegmentation = derive2 { name="spotSegmentation"; version="1.48.0"; sha256="1ia6nmhllvw19hfp7zw41n43wclmzgirbcm274l1d85nqxq0a277"; depends=[mclust]; }; - sscore = derive2 { name="sscore"; version="1.46.0"; sha256="0s6pd5m18m90fgsaqcjwq6py886z257xz6b3xyg5zr3hqy0nzy9j"; depends=[affy affyio]; }; - sscu = derive2 { name="sscu"; version="2.2.0"; sha256="1rhijb4wyahvjfpsz5kkmw1rxc8qj9w1f5imkzb5p59n4cj094b0"; depends=[BiocGenerics Biostrings seqinr]; }; - ssize = derive2 { name="ssize"; version="1.48.0"; sha256="1nj2nhxf85qbpx43j2ymb25wnhd6anw3a2dgxhi3bjpx6qlngnhs"; depends=[gdata xtable]; }; - ssviz = derive2 { name="ssviz"; version="1.8.0"; sha256="1lpf941whhmksw8y8ingaqp17687f3xkgs5rimq65px8bfpa7apq"; depends=[Biostrings ggplot2 RColorBrewer reshape Rsamtools]; }; - staRank = derive2 { name="staRank"; version="1.16.0"; sha256="1rx4khhj24rdkx2zf5zlgx5avkpgx3qpg0ly815gbdrv7j7imx0f"; depends=[cellHTS2]; }; - statTarget = derive2 { name="statTarget"; version="1.4.12"; sha256="0i4dq5563fkcryax1n5mhdir9w6bq72xxx2c5alb4si892c14ygr"; depends=[gWidgets2 gWidgets2RGtk2 impute pdist pls plyr pROC randomForest rrcov]; }; - stepNorm = derive2 { name="stepNorm"; version="1.46.0"; sha256="0ns0abii8h6dxd44n9hdh7ww11mwb9izcpawxg2vwdqj5wv342qg"; depends=[marray MASS]; }; - stepwiseCM = derive2 { name="stepwiseCM"; version="1.20.0"; sha256="0fyf4n76r8p53byapfb0fjp7dyxsy3gh2d7f4sl81hsa69zz703g"; depends=[Biobase e1071 glmpath MAclinical pamr penalized randomForest snowfall tspair]; }; - subSeq = derive2 { name="subSeq"; version="1.4.0"; sha256="0ly7qcghf9979qmxjvd3ihs7wqys1r45x459jp3sl3skf3cnlz9m"; depends=[Biobase data_table digest dplyr ggplot2 magrittr qvalue tidyr]; }; - supraHex = derive2 { name="supraHex"; version="1.12.0"; sha256="05jaqr98rwy02wzppbb2q77yw7yjkz7h6wd74mhd3v8dk4h7963g"; depends=[ape hexbin MASS]; }; - survcomp = derive2 { name="survcomp"; version="1.24.0"; sha256="03232xxda6w9cxj7q84bdqjiza7y36kxk6l9n1nqawmy2kayc3kn"; depends=[bootstrap ipred KernSmooth prodlim rmeta SuppDists survival survivalROC]; }; - sva = derive2 { name="sva"; version="3.22.0"; sha256="1wc1fjm6dzlsqqagm43y57w8jh8nsh0r0m8z1p6ximcb5gxqh7hn"; depends=[genefilter mgcv]; }; - switchBox = derive2 { name="switchBox"; version="1.10.0"; sha256="1avzqy2iqfzb0f6d03bhjr6fr835mwy3isga96fgxnyyca8cf81r"; depends=[gplots pROC]; }; - switchde = derive2 { name="switchde"; version="1.0.0"; sha256="0335xxl5g3xi6g9qhhhgm6qhaqpv2dqs1579c9agz05hm5fm3r1c"; depends=[Biobase dplyr ggplot2]; }; - synapter = derive2 { name="synapter"; version="1.16.0"; sha256="0bqldlj2fq55nlsbx0d59i8rcsja9sapx34jgm8vfrch8qng9srv"; depends=[Biobase BiocParallel Biostrings cleaver hwriter knitr lattice MSnbase multtest qvalue RColorBrewer]; }; - synergyfinder = derive2 { name="synergyfinder"; version="1.0.0"; sha256="09vznrqz6f9db9wxralg3sb8jx8wra1d1lw5z8ywm8xfsc6jjs4s"; depends=[drc ggplot2 gplots gridBase kriging lattice nleqslv reshape2]; }; - synlet = derive2 { name="synlet"; version="1.4.0"; sha256="18sik8k7j72sd2ix6k1qvcx44njf6rbbrj8bp6y60nzbc4z7psfk"; depends=[doBy dplyr ggplot2 magrittr RankProd RColorBrewer reshape2]; }; - systemPipeR = derive2 { name="systemPipeR"; version="1.8.1"; sha256="0hyi841w8fm2yzpm6lwqi3jz5kc8ny8dy5p29dxynzaw5bpjw56d"; depends=[annotate BatchJobs BiocGenerics Biostrings DESeq2 edgeR GenomicFeatures GenomicRanges ggplot2 GO_db GOstats limma pheatmap rjson Rsamtools ShortRead SummarizedExperiment VariantAnnotation]; }; - tRanslatome = derive2 { name="tRanslatome"; version="1.12.0"; sha256="0jypkql5fklqsr79hzj2fvkzkam1gxrjhkhfqjpws53bvy1f6d55"; depends=[anota Biobase DESeq edgeR GOSemSim gplots Heatplus limma org_Hs_eg_db plotrix RankProd samr sigPathway topGO]; }; - ternarynet = derive2 { name="ternarynet"; version="1.18.0"; sha256="14dj124wp0q5cdhmy7ywdvrzs2dpv2gwhwqmzbqazljmmjc49mzk"; depends=[igraph]; }; - tigre = derive2 { name="tigre"; version="1.28.1"; sha256="0imsxpk0v9vwai48hmd3ndaki5z9v3yim0a3kmx3y1aym71wx68c"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI gplots RSQLite]; }; - tilingArray = derive2 { name="tilingArray"; version="1.52.0"; sha256="1h1bgkc2smlxrivsqv5k92ynlcwf7gzpjlzsgaimcjvrzd6rvxcp"; depends=[affy Biobase genefilter pixmap RColorBrewer strucchange vsn]; }; - timecourse = derive2 { name="timecourse"; version="1.46.0"; sha256="0m8jlair0bzv0rw52ydv5r1bjnkdq3vxaavhbrpaqynx31lc9hqk"; depends=[Biobase limma marray MASS]; }; - tkWidgets = derive2 { name="tkWidgets"; version="1.52.0"; sha256="1iazw1dc0xr0vdm9vlxy0awlxmdjsvc1l0g9zrqr9h1mldpi1p5x"; depends=[DynDoc widgetTools]; }; - tofsims = derive2 { name="tofsims"; version="1.2.0"; sha256="0msmpix09ypq9gn4gh0z15caap1736zqzzda3zp8pnbjvj45jvv6"; depends=[ALS ChemometricsWithR KernSmooth ProtGenerics Rcpp RcppArmadillo signal]; }; - topGO = derive2 { name="topGO"; version="2.26.0"; sha256="0j6sgvam4lk9348ag6pypcbkv93x4fk0di8ivhr23mz2s2yqzwrx"; depends=[AnnotationDbi Biobase BiocGenerics DBI GO_db graph lattice matrixStats SparseM]; }; - trackViewer = derive2 { name="trackViewer"; version="1.10.2"; sha256="0a54xl7g8p6nzw6zyxchb4qinbzpfl6d7g12080lnjvkcf8dm2pj"; depends=[AnnotationDbi GenomicAlignments GenomicFeatures GenomicRanges grImport Gviz IRanges pbapply Rsamtools rtracklayer S4Vectors scales]; }; - tracktables = derive2 { name="tracktables"; version="1.8.1"; sha256="0px4lhnz6nswih0fwqhqa37wl8j4pc33jyl2yrvi8dhfky3n4pn4"; depends=[GenomicRanges IRanges RColorBrewer Rsamtools stringr tractor_base XML XVector]; }; - transcriptR = derive2 { name="transcriptR"; version="1.2.0"; sha256="0ny0qnwrzd9xyhjdkb6cigdsk4k0db3qivkma553zifrwrd41ja9"; depends=[BiocGenerics caret chipseq e1071 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges pROC reshape2 Rsamtools rtracklayer S4Vectors]; }; - traseR = derive2 { name="traseR"; version="1.4.0"; sha256="03c33z1832rxq2h7hi69ya07708264v57h4f5xn29c0xmgd9zz7j"; depends=[BSgenome_Hsapiens_UCSC_hg19 GenomicRanges IRanges]; }; - triform = derive2 { name="triform"; version="1.16.0"; sha256="18s80s90bfjz5nnm3xh0x1h2px5cq3la1x4vir1g3bgbqgmmfrrm"; depends=[BiocGenerics IRanges yaml]; }; - trigger = derive2 { name="trigger"; version="1.20.0"; sha256="1yg6vcsqccfdd6im5xfa7m5zcm2l1iyd46bj4zfc4fjwbgqw833p"; depends=[corpcor qtl qvalue sva]; }; - trio = derive2 { name="trio"; version="3.12.0"; sha256="1wdjapmj8wxgjg6c201jx14c1gakgr79x8xdszw8kwpnb5ih9byn"; depends=[]; }; - triplex = derive2 { name="triplex"; version="1.14.0"; sha256="0bxxs37iia281k4y94bs0n356xpfw9wvxzzwj8pyqp2gdw876yhj"; depends=[Biostrings GenomicRanges IRanges S4Vectors XVector]; }; - tspair = derive2 { name="tspair"; version="1.32.0"; sha256="1vicp69g5ykvqxpp00rgmnvgg87ra40wyvlnb9gj3xy3g9ixqj8g"; depends=[Biobase]; }; - tweeDEseq = derive2 { name="tweeDEseq"; version="1.20.0"; sha256="0n6g74088ikbnfzzmiq60r3l51rch51krc05zzjg2vw1gx5zschn"; depends=[cqn edgeR limma MASS]; }; - twilight = derive2 { name="twilight"; version="1.50.0"; sha256="0d84xcvpr7y1c6mr4z9dnp2bck52dzw7xbf99dwmj20vxq9d424r"; depends=[Biobase]; }; - tximport = derive2 { name="tximport"; version="1.2.0"; sha256="1k5a7dad6zqg936s17f6cmwgqp11x24z9zhxndsgwbscgpyhpcb0"; depends=[]; }; - uSORT = derive2 { name="uSORT"; version="1.0.0"; sha256="14bb5sfl0fwmg1g214dqk4i3daqxay0jkcw7a3wlh6a61dcrcfbl"; depends=[Biobase BiocGenerics cluster fpc gplots igraph Matrix monocle plyr RANN RSpectra VGAM]; }; - unifiedWMWqPCR = derive2 { name="unifiedWMWqPCR"; version="1.10.0"; sha256="108rrifxbk9g06ssfa4jx73j6r0r5d1xaagk071c6zi4a09pa3hh"; depends=[BiocGenerics HTqPCR]; }; - variancePartition = derive2 { name="variancePartition"; version="1.4.2"; sha256="0iidrw8pcrd6c7z5sdff163108q493im8csikl1ahiyz1dxwfhw8"; depends=[Biobase colorRamps doParallel foreach ggplot2 gplots iterators limma lme4 MASS pbkrtest reshape2]; }; - vbmp = derive2 { name="vbmp"; version="1.42.0"; sha256="0dqk8lgnib6if2j4j03zl59yc1g97457ib97ayycws9l56amf135"; depends=[]; }; - viper = derive2 { name="viper"; version="1.8.0"; sha256="1wnaqfm6lds9qb6dqqrv8k8asbvgfimnkg4q7czv9bk30b9820i5"; depends=[Biobase e1071 KernSmooth mixtools]; }; - vsn = derive2 { name="vsn"; version="3.42.3"; sha256="0mgl0azys2g90simf8wx6jdwd7gyg3m4pf12n6w6507jixm2cg97"; depends=[affy Biobase ggplot2 lattice limma]; }; - vtpnet = derive2 { name="vtpnet"; version="0.14.0"; sha256="0w52411h0w3bidgcqxanw8f4j2053iff2dfc3qzaiaxj6gfcbf4p"; depends=[doParallel foreach GenomicRanges graph gwascat]; }; - wateRmelon = derive2 { name="wateRmelon"; version="1.18.0"; sha256="1jl8h5xdppnvb8zfj103858dh6lr9w20r64y769wg1kpd3zxvxfw"; depends=[Biobase IlluminaHumanMethylation450kanno_ilmn12_hg19 illuminaio limma lumi matrixStats methylumi ROC]; }; - wavClusteR = derive2 { name="wavClusteR"; version="2.8.0"; sha256="013931vz9xz12vz27i15lr63sgmc95krqkx9kz0nsmfs458c6qfz"; depends=[BiocGenerics Biostrings foreach GenomicFeatures GenomicRanges ggplot2 Hmisc IRanges mclust Rsamtools rtracklayer S4Vectors seqinr stringr wmtsa]; }; - waveTiling = derive2 { name="waveTiling"; version="1.16.0"; sha256="0234jqsc1q2na8x0cnfc8lm52hyqakmp0bc377d6cfgzcdp7racg"; depends=[affy Biobase Biostrings GenomeGraphs GenomicRanges IRanges oligo oligoClasses preprocessCore waveslim]; }; - weaver = derive2 { name="weaver"; version="1.40.0"; sha256="0zvhiasy3s428xy0n0fk0601dbs7fgwpqmp90fbq26aj4gfxy5vg"; depends=[codetools digest]; }; - webbioc = derive2 { name="webbioc"; version="1.46.0"; sha256="0alxpikfnfhsfjkkj8cz27x661r8gwvwvxnzndvzbw5smnyklac5"; depends=[affy annaffy Biobase BiocInstaller gcrma multtest qvalue vsn]; }; - widgetTools = derive2 { name="widgetTools"; version="1.52.0"; sha256="1jj18mkaq8fc5zdaf1l1vvs9barx9b5wp0qa8rvx3j6zacdlbw2r"; depends=[]; }; - xcms = derive2 { name="xcms"; version="1.50.1"; sha256="0gr59vn52cmpsqlbqlr55a6rfwq0sk2gqnba1fhyfjd22cbghxm8"; depends=[Biobase BiocGenerics BiocParallel lattice MassSpecWavelet multtest mzR plyr ProtGenerics RANN RColorBrewer S4Vectors]; }; - xmapbridge = derive2 { name="xmapbridge"; version="1.32.0"; sha256="02fm6sy5ynq450pkcf1zlwj2ih6f48pishmhia2d5is5iy22acbh"; depends=[]; }; - xps = derive2 { name="xps"; version="1.34.0"; sha256="1hrprdnqyy7rrvrzsnm9sy75q31zgxy134v4zbivya8f30dap4x8"; depends=[]; }; - yamss = derive2 { name="yamss"; version="1.0.4"; sha256="0dirg1nl2bp1xr0m10yzckhwynxl6p6jmvb5s5b03g66m4a7i72p"; depends=[BiocGenerics data_table EBImage IRanges limma Matrix mzR S4Vectors SummarizedExperiment]; }; - yaqcaffy = derive2 { name="yaqcaffy"; version="1.34.0"; sha256="0wv52qnds4ni2a1p7m54ihdwiqxzdyvq0fb5dzjcq41abnkpiqsi"; depends=[simpleaffy]; }; - yarn = derive2 { name="yarn"; version="1.0.1"; sha256="1ra8b711inispl3in1ajjwkyxax6w9w5nb9w47iacyk7kp6vi3a3"; depends=[Biobase biomaRt downloader edgeR gplots limma matrixStats preprocessCore quantro RColorBrewer readr]; }; - zlibbioc = derive2 { name="zlibbioc"; version="1.20.0"; sha256="0hbk90q5hl0fycfvy5nxxa4hxgglag9lzp7i0fg849bqygg5nbyq"; depends=[]; }; + ABAEnrichment = derive2 { name="ABAEnrichment"; version="1.8.0"; sha256="0l2zn5hqbab30lnzk856iki51jn4l9na7jdagibhvf777v5jcz51"; depends=[ABAData data_table gplots gtools Rcpp]; }; + ABSSeq = derive2 { name="ABSSeq"; version="1.32.3"; sha256="05pcn9p24nifz10a9pzrwkmsps8yhrr214yryypapshghb7kmz76"; depends=[limma locfit]; }; + ABarray = derive2 { name="ABarray"; version="1.46.0"; sha256="19m6qlcvylz8qgvcagsnir0pjhdyl4axdfj9q53q9ff1iraw6qwj"; depends=[Biobase multtest]; }; + ACME = derive2 { name="ACME"; version="2.34.0"; sha256="1n7scyw5lklzaprmy6dy0qim1ypwpvfrzzgczkby1dljk0pd4i16"; depends=[Biobase BiocGenerics]; }; + ADaCGH2 = derive2 { name="ADaCGH2"; version="2.18.0"; sha256="02imx6x2hcb3bk6qwgwmwsv22dbbl1a6iyk35paqflsk1kdbn9fx"; depends=[aCGH bit cluster DNAcopy ff ffbase GLAD snapCGH tilingArray waveslim]; }; + AGDEX = derive2 { name="AGDEX"; version="1.26.0"; sha256="0qy9zihx8bqz343h2wk3iy5j71142r11a2862lz5sj05h94kxy0i"; depends=[Biobase GSEABase]; }; + AIMS = derive2 { name="AIMS"; version="1.10.0"; sha256="1c3mq7lm91779w27c35ych1sp5rcja75zim9a267qc0pqa4xlzv2"; depends=[Biobase e1071]; }; + ALDEx2 = derive2 { name="ALDEx2"; version="1.10.0"; sha256="0q63sfnm4h6w6yhv55m87884ym60g1q1qnd82fqx6vlh4nssvz53"; depends=[BiocParallel GenomicRanges IRanges multtest S4Vectors SummarizedExperiment]; }; + AMOUNTAIN = derive2 { name="AMOUNTAIN"; version="1.4.0"; sha256="0zgl47x8bvdsngq5sp0iq4ssx4skn81l85fspfwl3qyvr4y3r91r"; depends=[]; }; + ANF = derive2 { name="ANF"; version="1.0.0"; sha256="0s39mh0xbrr3kkack6n48jfwg2b0nrqilm2q0v64rf7jpfn6gj11"; depends=[Biobase igraph MASS RColorBrewer survival]; }; + ARRmNormalization = derive2 { name="ARRmNormalization"; version="1.18.0"; sha256="1gy2r863g21phwba59ksf9rp3azgy18f9cslka0l4kxckk701n85"; depends=[ARRmData]; }; + ASAFE = derive2 { name="ASAFE"; version="1.4.0"; sha256="13vdv961i48lhkmaxnpg33j628h5a8b6f7s5anvgxskv2b0dzzz7"; depends=[]; }; + ASEB = derive2 { name="ASEB"; version="1.22.0"; sha256="0pry207kvczv9ihs7vcq1ljhll4i3grn08wprip9n9yy1xy4w2xj"; depends=[]; }; + ASGSCA = derive2 { name="ASGSCA"; version="1.12.0"; sha256="1b7i4qwajvv5dmn1qn5k0azv3ad5kxjkwnwsgvjlh7m573shdpxk"; depends=[MASS Matrix]; }; + ASSET = derive2 { name="ASSET"; version="1.16.0"; sha256="12863h5f7ib3p26ghim2h0l7zn51y3624rihsybj5lpycnxkam9q"; depends=[MASS msm mvtnorm rmeta tmvnsim]; }; + ASSIGN = derive2 { name="ASSIGN"; version="1.14.0"; sha256="12g1dh35azv1z5bc7n7gyr0vnyyi2r2jrvi6x0gyikbdszxwfysx"; depends=[ggplot2 gplots msm Rlab sva]; }; + ASpli = derive2 { name="ASpli"; version="1.4.0"; sha256="19v9p4brgrzijin759n1q8zjrlksrzhmczi1nwhsjgbg47f35vs7"; depends=[AnnotationDbi BiocGenerics BiocStyle edgeR GenomicAlignments GenomicFeatures GenomicRanges Gviz IRanges Rsamtools S4Vectors]; }; + ATACseqQC = derive2 { name="ATACseqQC"; version="1.2.8"; sha256="11l1cpfcadhdrcy5qdmq9gd18if8rs5xw4b5m0ky8gxgxmfpd2wq"; depends=[BiocGenerics Biostrings BSgenome ChIPpeakAnno GenomeInfoDb GenomicAlignments GenomicRanges GenomicScores IRanges limma motifStack randomForest Rsamtools rtracklayer S4Vectors]; }; + AUCell = derive2 { name="AUCell"; version="1.0.0"; sha256="0b6az665vpdkp82xcr4xgric3nw9204g47rj4316s30l5w5l1j2v"; depends=[data_table GSEABase mixtools R_utils SummarizedExperiment]; }; + AffyCompatible = derive2 { name="AffyCompatible"; version="1.38.0"; sha256="1lxxpldgrsl0nf63cfhbqpraylfb3118y4j8q4xknr7x8pj95gns"; depends=[Biostrings RCurl XML]; }; + AffyExpress = derive2 { name="AffyExpress"; version="1.44.0"; sha256="0nwvgkh9nc9gag9dh85g3x4d5125p00c9jc55knpr11jraj2xifw"; depends=[affy limma]; }; + AffyRNADegradation = derive2 { name="AffyRNADegradation"; version="1.24.0"; sha256="197rrlkxmynh8fy1xzmh68d2kygpdw7kkrysar3nsikl051yl6vb"; depends=[affy]; }; + AgiMicroRna = derive2 { name="AgiMicroRna"; version="2.28.0"; sha256="0yx9pz9641hi9g67nkhlngz4hbykbp2g4p0xji90jjw6ajf28qwa"; depends=[affy affycoretools Biobase limma preprocessCore]; }; + AllelicImbalance = derive2 { name="AllelicImbalance"; version="1.16.0"; sha256="0plqdj4828v9icn958f7isrdpvqwk2smxacv6qpd35dzlpmlrpgh"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gridExtra Gviz IRanges lattice latticeExtra nlme Rsamtools S4Vectors seqinr SummarizedExperiment VariantAnnotation]; }; + AnalysisPageServer = derive2 { name="AnalysisPageServer"; version="1.12.0"; sha256="1spasp0r91lbrc6l0qjadv1yg1m1659dkc2pm1mf09bpplbsagf1"; depends=[Biobase graph log4r rjson]; }; + Anaquin = derive2 { name="Anaquin"; version="2.2.0"; sha256="0j9f3ck23g9s09lf2adbds5pxnf9i0ji06x30gpi1dcakrs6izf2"; depends=[DESeq2 ggplot2 knitr locfit plyr qvalue ROCR]; }; + AneuFinder = derive2 { name="AneuFinder"; version="1.6.0"; sha256="07mwfzpv9ya9ma74n993pihjhi10pjpnzbx1bfvk55h4mcyl7r7c"; depends=[AneuFinderData bamsignals BiocGenerics Biostrings cowplot DNAcopy doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggdendro ggplot2 ggrepel IRanges mclust ReorderCluster reshape2 Rsamtools S4Vectors]; }; + AnnotationDbi = derive2 { name="AnnotationDbi"; version="1.40.0"; sha256="1dh4qs1a757n640gs34lf6z2glc96nan86x0sqaw5csadl2rhnlc"; depends=[Biobase BiocGenerics DBI IRanges RSQLite S4Vectors]; }; + AnnotationFilter = derive2 { name="AnnotationFilter"; version="1.2.0"; sha256="04zf864c1fvdlaay2r5cn30fc1n5i3czh31fs62qlrvs61wjiscs"; depends=[GenomicRanges lazyeval]; }; + AnnotationForge = derive2 { name="AnnotationForge"; version="1.20.0"; sha256="01vbrf76vqfvxh6vpfxkjwccxggnha3byqzj333glqz2b6kwx5q1"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl RSQLite S4Vectors XML]; }; + AnnotationFuncs = derive2 { name="AnnotationFuncs"; version="1.28.0"; sha256="1g6y7bwk573yaays0fmlicxq2452sli0kv41bq8sh4ja2l5jh5i6"; depends=[AnnotationDbi DBI]; }; + AnnotationHub = derive2 { name="AnnotationHub"; version="2.10.1"; sha256="14v8g44a6zg9j2rwn9x9y8509k0wr2cw8yccliz24glplb40wva4"; depends=[AnnotationDbi BiocGenerics BiocInstaller curl httr interactiveDisplayBase RSQLite S4Vectors yaml]; }; + AnnotationHubData = derive2 { name="AnnotationHubData"; version="1.8.0"; sha256="1nsai8a2vf5jwczd4k3vbdd9xbn6dfg6dydvf4byklxj6pk6vi97"; depends=[AnnotationDbi AnnotationForge AnnotationHub Biobase BiocGenerics BiocInstaller biocViews Biostrings DBI futile_logger GenomeInfoDb GenomicFeatures GenomicRanges GEOquery IRanges jsonlite OrganismDbi rBiopaxParser RCurl Rsamtools RSQLite rtracklayer S4Vectors XML]; }; + ArrayExpress = derive2 { name="ArrayExpress"; version="1.38.0"; sha256="01kb4322pfl9w6za6glb777hdyc8j36xs6flz3b11n1mjryipz7c"; depends=[Biobase limma oligo XML]; }; + ArrayExpressHTS = derive2 { name="ArrayExpressHTS"; version="1.28.0"; sha256="04qnxgywyxww8xd6r8vgy8sglbixd25749dmbsw0wgqk6zcgysim"; depends=[Biobase BiocGenerics biomaRt Biostrings bitops DESeq edgeR GenomicRanges Hmisc IRanges R2HTML RColorBrewer rJava Rsamtools sampling sendmailR ShortRead snow svMisc XML]; }; + ArrayTV = derive2 { name="ArrayTV"; version="1.16.0"; sha256="1hn5dngk4civwzx1w2py1n9g1k1jv3kwrj6z6ysvfsfi4q668341"; depends=[DNAcopy foreach oligoClasses S4Vectors]; }; + ArrayTools = derive2 { name="ArrayTools"; version="1.38.0"; sha256="0dyd3qwc0x25m66wqd3az8l0mabiw13j5wx2f620psyq0y5ghlkd"; depends=[affy Biobase limma xtable]; }; + AtlasRDF = derive2 { name="AtlasRDF"; version="1.11.0"; sha256="1n52s6saydhh5j5kki9zkilhlxd8nn8463988gyr1jsb4g6fdljv"; depends=[hash SPARQL]; }; + BAC = derive2 { name="BAC"; version="1.38.0"; sha256="04s7fbb8b4is97alj64p86jnh1lgf4a0n02wg3g9rvd75jxmzbai"; depends=[]; }; + BADER = derive2 { name="BADER"; version="1.16.0"; sha256="05p006rqydnvz5a8gdbara9fsyn51b5flc05j593bvvlmkc6anl5"; depends=[]; }; + BAGS = derive2 { name="BAGS"; version="2.18.0"; sha256="1qhmrz6ffhhsbnmcc0xmb64psv50b1jd1gxkjhhv479mcfl6mk06"; depends=[Biobase breastCancerVDX]; }; + BASiCS = derive2 { name="BASiCS"; version="1.0.0"; sha256="15yby5dz0hizr76bpa5clrpfh1ycvpkk11i7y7ak164ikzxvvmd9"; depends=[BiocGenerics coda data_table KernSmooth matrixStats Rcpp RcppArmadillo S4Vectors scran SingleCellExperiment SummarizedExperiment testthat]; }; + BBCAnalyzer = derive2 { name="BBCAnalyzer"; version="1.8.0"; sha256="0fv5gyzfv0093dlyrlci9d88fcb0ifgljxwivrxpkbbsll5vrpxh"; depends=[Biostrings GenomicRanges IRanges Rsamtools SummarizedExperiment VariantAnnotation]; }; + BCRANK = derive2 { name="BCRANK"; version="1.40.0"; sha256="0vbjskazhm5v4lmwdc456r5vl2v848ldqrzbdjrdxjlvd72wfprw"; depends=[Biostrings]; }; + BEAT = derive2 { name="BEAT"; version="1.16.0"; sha256="0x4k45qgzwv6m00zq1jhbhc2aa5slgg5p4g8g909vajc75fpp6g7"; depends=[Biostrings BSgenome GenomicRanges ShortRead]; }; + BEclear = derive2 { name="BEclear"; version="1.10.0"; sha256="1skkqzph89lx9cwlgyd2xmn1808sn5byfa8mqdq6w60j6vwplpzn"; depends=[Matrix snowfall]; }; + BGmix = derive2 { name="BGmix"; version="1.38.0"; sha256="1778bm1hx8bw00n0l3d5jvfldc7hqmpg2w1nbsc3c017rd1l2ryk"; depends=[KernSmooth]; }; + BHC = derive2 { name="BHC"; version="1.30.0"; sha256="0j8sb6ifq2nxvlarm1zqa89yzfs3si4w43ily9nnbmlnhngr6d0m"; depends=[]; }; + BLMA = derive2 { name="BLMA"; version="1.3.2"; sha256="1dwhhqsvah7ds7v2jd2khkabcg7222g2bfi0q5dd1xqkd15mq0j3"; depends=[Biobase graph GSA limma PADOG ROntoTools]; }; + BPRMeth = derive2 { name="BPRMeth"; version="1.4.0"; sha256="0b7p2z69zjxrza2qfgpg6dfk96r9gfjm3v4qzafjy0hrbcfi2d74"; depends=[assertthat data_table doParallel e1071 earth foreach GenomicRanges IRanges MASS randomForest S4Vectors]; }; + BRAIN = derive2 { name="BRAIN"; version="1.24.0"; sha256="0cxci3clyz98r8vx6cq49ypc3s3bkhx8rx0h60r54va6gbp1j2lm"; depends=[Biostrings lattice PolynomF]; }; + BSgenome = derive2 { name="BSgenome"; version="1.46.0"; sha256="1jbzq7lm2iajajn2bifxnkss0k9fdvgqr30mral17cbhp5f6w4lq"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools rtracklayer S4Vectors XVector]; }; + BUMHMM = derive2 { name="BUMHMM"; version="1.2.0"; sha256="00w730jxdl83sm385a63d35b2gfxlxj0jlj85xa3li5w94cwpb07"; depends=[Biostrings devtools gtools IRanges stringi SummarizedExperiment]; }; + BUS = derive2 { name="BUS"; version="1.34.0"; sha256="07hm54q8db209xc9sfj3w0dbrd7fqdzzs1083dwabfmrgwq69ivn"; depends=[infotheo minet]; }; + BaalChIP = derive2 { name="BaalChIP"; version="1.4.0"; sha256="1zaknwb718hpvlrwxfan7xyd3mm7iim3mffsc2d7gfxd5s3fa4q3"; depends=[coda doBy doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges reshape2 Rsamtools scales]; }; + BadRegionFinder = derive2 { name="BadRegionFinder"; version="1.6.0"; sha256="04wl2s36ji1qdxm5x1nvmb9licb65hdfch319zvhinvsr04nig6i"; depends=[biomaRt GenomicRanges Rsamtools S4Vectors VariantAnnotation]; }; + BaseSpaceR = derive2 { name="BaseSpaceR"; version="1.22.0"; sha256="1pck2mnb9ik3lz88xn9g1rgaww1k4khv55fab920gk7plcj9fqvp"; depends=[RCurl RJSONIO]; }; + Basic4Cseq = derive2 { name="Basic4Cseq"; version="1.14.0"; sha256="1xylz923wn9n9cw19hlyrgq3rrf8r172jhi9a3gqlw3bmzhxh7h0"; depends=[Biostrings BSgenome_Ecoli_NCBI_20080805 caTools GenomicAlignments GenomicRanges RCircos]; }; + BasicSTARRseq = derive2 { name="BasicSTARRseq"; version="1.6.0"; sha256="1qx0zfxy8xi2djmk8b6fbbipv64gdp9b85acy3z4z9dnsq80qps1"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges S4Vectors]; }; + BatchQC = derive2 { name="BatchQC"; version="1.6.1"; sha256="1fjin9j6gzxkb9zif2wk56w6axb9ld104p8kly0ld2b3l73knnid"; depends=[corpcor d3heatmap ggvis gplots knitr limma Matrix matrixStats MCMCpack moments pander reshape2 rmarkdown shiny sva]; }; + BayesKnockdown = derive2 { name="BayesKnockdown"; version="1.4.0"; sha256="1dkch2md8fi23i3pg90rzxy185v6953jhz4l2icgglxhp15ydmfp"; depends=[Biobase]; }; + BayesPeak = derive2 { name="BayesPeak"; version="1.30.0"; sha256="1f8r1z7mmh40nrfqj1b3drjli6zb6hm645a9xi39claid2kvfh9z"; depends=[IRanges]; }; + BeadDataPackR = derive2 { name="BeadDataPackR"; version="1.30.0"; sha256="153ks6bbhqzdkl88wvszjg5f67hr0gnf1mnhn6crq7i3pjy1jw0m"; depends=[]; }; + BgeeDB = derive2 { name="BgeeDB"; version="2.4.0"; sha256="1jha16jqbj5jzanky16ihn0sqvx0k50hh1p5xw1m4ssi86dnx42x"; depends=[Biobase data_table digest dplyr graph RCurl tidyr topGO]; }; + BiGGR = derive2 { name="BiGGR"; version="1.14.0"; sha256="1frxzj99qh94ll1xsvvnmgnfai7wfzchsqdrk2s0cp7z40yng13b"; depends=[hyperdraw hypergraph LIM limSolve rsbml stringr]; }; + BiRewire = derive2 { name="BiRewire"; version="3.10.0"; sha256="08z2h5fq1nm192s2vwzv1q6sp82axkk81p05bib71wl5vg0j5fpk"; depends=[igraph Matrix slam tsne]; }; + BiSeq = derive2 { name="BiSeq"; version="1.18.0"; sha256="0277lknj60gniwx4vr3ffd46gldzgjr7lbw8xy5xzdd0wa45wanz"; depends=[betareg Biobase BiocGenerics Formula GenomeInfoDb GenomicRanges globaltest IRanges lokern rtracklayer S4Vectors SummarizedExperiment]; }; + BicARE = derive2 { name="BicARE"; version="1.36.0"; sha256="1ikjnpg1j7pk6y9jm0p8y28aqrq37xryhj3qnksphwvwwj533xi2"; depends=[Biobase GSEABase multtest]; }; + BioCor = derive2 { name="BioCor"; version="1.2.1"; sha256="0f6r23imyldfacxacmici1r918b700w2i8fmd69d36bvykra59xs"; depends=[BiocParallel Matrix]; }; + BioMVCClass = derive2 { name="BioMVCClass"; version="1.46.0"; sha256="08f8zcmncbmbhrm3y9i8wvjfivskhp8580rcndkcc82wd5g8fqdc"; depends=[Biobase graph MVCClass Rgraphviz]; }; + BioMedR = derive2 { name="BioMedR"; version="1.1.0"; sha256="1wdszvk1qkwpfzxghbjz0zvh5zxf1wkd2f29f4hjxh09dkza49r0"; depends=[Biostrings ChemmineOB ChemmineR doParallel fmcsR foreach GOSemSim org_Hs_eg_db pls randomForest rcdk RCurl rjson]; }; + BioNet = derive2 { name="BioNet"; version="1.38.0"; sha256="1pbi461aly08vy16sbakx249q01pyn3iwnp6xbdyi45gr1x9g3c0"; depends=[AnnotationDbi Biobase graph igraph RBGL]; }; + BioQC = derive2 { name="BioQC"; version="1.6.0"; sha256="1lrvynzh38h62ikzig6b5fq1j738d0rrpb9bgj1lm1rwf9bbdgvs"; depends=[Biobase Rcpp]; }; + BioSeqClass = derive2 { name="BioSeqClass"; version="1.36.0"; sha256="0drgj7dhx87qspqwrxhmjiycvz2vn14kh9wx5g0r7qimvkga9lgr"; depends=[Biobase Biostrings class e1071 foreign ipred klaR nnet party randomForest rpart scatterplot3d tree]; }; + Biobase = derive2 { name="Biobase"; version="2.38.0"; sha256="1cgm1ja1kp56zdlzyy9ggbkfn8r2vbsd4hncmz8g4hjd47fg18kg"; depends=[BiocGenerics]; }; + BiocCaseStudies = derive2 { name="BiocCaseStudies"; version="1.40.0"; sha256="0hwmqv8nimc8gl1c5a72ckmgag5j8886ab62i1irlkfis5x2rj8m"; depends=[Biobase]; }; + BiocCheck = derive2 { name="BiocCheck"; version="1.14.0"; sha256="1nzp8kgw13z9pgf885rplj6k37jcldfhbz0adqclxr2gq0yalmyx"; depends=[BiocInstaller biocViews codetools graph httr optparse stringdist]; }; + BiocFileCache = derive2 { name="BiocFileCache"; version="1.2.2"; sha256="111rrzz366kmqs1v8jx5ck0kb0xs42f250m5i0sn65ypvg9ag504"; depends=[DBI dbplyr dplyr httr rappdirs RSQLite]; }; + BiocGenerics = derive2 { name="BiocGenerics"; version="0.24.0"; sha256="03wxvhxyrhipbgcg83lqlfn7p9gbzzrnl48y0dq7303xgp232zai"; depends=[]; }; + BiocInstaller = derive2 { name="BiocInstaller"; version="1.28.0"; sha256="19fga27bv6q9v5mpil74y76lahmnwvpg2h33rdx1r79nvljkd19d"; depends=[]; }; + BiocParallel = derive2 { name="BiocParallel"; version="1.12.0"; sha256="13ng3n2wsgl3fh0v6jnz3vg51k5c1sh44pqdvblcrcd1qyjmmqhd"; depends=[BH futile_logger snow]; }; + BiocSklearn = derive2 { name="BiocSklearn"; version="1.0.2"; sha256="1zpfb7g353c01ffldrx7251919r6giy58s19w78jf0bslagblv4y"; depends=[BBmisc knitr reticulate SummarizedExperiment]; }; + BiocStyle = derive2 { name="BiocStyle"; version="2.6.1"; sha256="03pp04pkcq99kdv2spzr995h2cxsza7l6w3d4gp4112m06prcybm"; depends=[bookdown knitr rmarkdown yaml]; }; + BiocWorkflowTools = derive2 { name="BiocWorkflowTools"; version="1.4.1"; sha256="13xcsd4c2l9jrcbl8axrragk4g2x6sp6xrk5r4gcligdicgxpq9l"; depends=[BiocStyle bookdown git2r httr knitr rmarkdown stringr]; }; + Biostrings = derive2 { name="Biostrings"; version="2.46.0"; sha256="0vg50qdlxqcm2d6axjnzg8wh8pr4c5gz03l8bdl0llmwzp0zclzk"; depends=[BiocGenerics IRanges S4Vectors XVector]; }; + BitSeq = derive2 { name="BitSeq"; version="1.22.0"; sha256="1xkmvzv2kdla3mrarlw21w1hz788w71443jbn36a8dc4p6wrnxhy"; depends=[IRanges Rsamtools S4Vectors zlibbioc]; }; + BrainStars = derive2 { name="BrainStars"; version="1.22.0"; sha256="0fipnpjpsp462dsfsvcrnysca4vsq2k6z15a6mxfxvqs1gybhvvj"; depends=[Biobase RCurl RJSONIO]; }; + BridgeDbR = derive2 { name="BridgeDbR"; version="1.12.0"; sha256="1yzn8sghqiy64l9q793yp9r3f1g1zy6ixzxbwb7skg1f5n3j7iig"; depends=[RCurl rJava]; }; + BrowserViz = derive2 { name="BrowserViz"; version="1.10.0"; sha256="1v3d0sfj05f0l4zfw1bd27gjrfkgca0n3mxxc30b42ybdmiif3xc"; depends=[BiocGenerics httpuv jsonlite]; }; + BrowserVizDemo = derive2 { name="BrowserVizDemo"; version="1.10.0"; sha256="0yps8ll1d14q0b93mpmmp0pgrjaqvxn0d7iqvpy9yg888zk46g8x"; depends=[BiocGenerics BrowserViz httpuv jsonlite Rcpp]; }; + BubbleTree = derive2 { name="BubbleTree"; version="2.8.0"; sha256="1nhf7sndiakjddvgihicc1vdnzqb8wmmlkng73sim1lb5hrjr391"; depends=[Biobase BiocGenerics BiocStyle biovizBase dplyr e1071 GenomicRanges ggplot2 gridExtra gtable gtools IRanges limma magrittr plyr RColorBrewer WriteXLS]; }; + BufferedMatrix = derive2 { name="BufferedMatrix"; version="1.42.0"; sha256="1vxr91xnicbmbwz5cssaviq7p0334ikrirm8jmsaxa9sb59cdy07"; depends=[]; }; + BufferedMatrixMethods = derive2 { name="BufferedMatrixMethods"; version="1.42.0"; sha256="1kay46cmrlilnjmiv2wnl99a4i9nc76f9j1j5rxg8cqxfq2hhmd2"; depends=[BufferedMatrix]; }; + CAFE = derive2 { name="CAFE"; version="1.14.0"; sha256="0lv0s2d0zqj43dqdkw5m4ac9190l6bfxj73adn5k2fl4wzl3a0rq"; depends=[affy annotate Biobase biovizBase GenomicRanges ggbio ggplot2 gridExtra IRanges]; }; + CAGEr = derive2 { name="CAGEr"; version="1.20.0"; sha256="0gavrpwibf8gm53f292x1f64vdr2byx97c18cvxg4x3g5m60vx3n"; depends=[beanplot BSgenome data_table GenomicRanges IRanges Rsamtools rtracklayer som VGAM]; }; + CALIB = derive2 { name="CALIB"; version="1.44.0"; sha256="1n6nlw0da0cyd8ca04gmg3wwpc0sqy0fbxclbxcjhn86rlwyxmg5"; depends=[limma]; }; + CAMERA = derive2 { name="CAMERA"; version="1.34.0"; sha256="1ibs7s611kdh82hyp5fbkp1mlk0c2nksbkys0h3prsg0lkss2jvi"; depends=[Biobase graph Hmisc igraph RBGL xcms]; }; + CATALYST = derive2 { name="CATALYST"; version="1.2.0"; sha256="1q31zzi15q2z46wsk3p4fvq8imxjkyywi849h5jyrvnxhca28mbz"; depends=[drc flowCore ggplot2 gridExtra matrixStats plotly RColorBrewer reshape2]; }; + CAnD = derive2 { name="CAnD"; version="1.10.0"; sha256="17nzlplz9d8dhzm546bznwmz20p7lxnsvq35qd09a3rdcf1abz77"; depends=[ggplot2 reshape]; }; + CCPROMISE = derive2 { name="CCPROMISE"; version="1.4.0"; sha256="0r0aardhmz76zd5lj1qzwyva8la0jv9wczfmak3r0pp2axaw13yr"; depends=[Biobase CCP GSEABase PROMISE]; }; + CEMiTool = derive2 { name="CEMiTool"; version="1.0.1"; sha256="1pqdnyxmpcp5gjf2w00cf1msbc96d8q9vdqbafg4x2fv83m9ivbq"; depends=[clusterProfiler data_table DT fgsea ggdendro ggplot2 ggpmisc ggrepel ggthemes gRbase gridExtra gtable htmltools igraph intergraph knitr matrixStats network pracma rmarkdown scales sna stringr WGCNA]; }; + CFAssay = derive2 { name="CFAssay"; version="1.12.0"; sha256="01yakrkpbs43013936rh8qd4giiz7y7cp9jrdx9i4p6h5h8jzj28"; depends=[]; }; + CGEN = derive2 { name="CGEN"; version="3.14.0"; sha256="14s1j2h5cb2gfgn73yvb933ng63cr9i8lx8hisd0g8lcfi2b5rxw"; depends=[mvtnorm survival]; }; + CGHbase = derive2 { name="CGHbase"; version="1.38.0"; sha256="0fynvcsjdbgp69i0nxrc8ni58rhb1kx9k5r3nb91n9i8s43gjqlm"; depends=[Biobase marray]; }; + CGHcall = derive2 { name="CGHcall"; version="2.40.0"; sha256="11pi6awz3858yb4s0z3qf3kcmsdgp6d4aj41g4lfix1sv5amllch"; depends=[Biobase CGHbase DNAcopy impute snowfall]; }; + CGHnormaliter = derive2 { name="CGHnormaliter"; version="1.32.0"; sha256="1br3yly4f32yqqnamscnbkz60bpyphj59igw4jnc8zj6ax0rfz4c"; depends=[Biobase CGHbase CGHcall]; }; + CGHregions = derive2 { name="CGHregions"; version="1.36.0"; sha256="01c4knp9i0k899h34fa7xzd2agil2pis5h2cnnx017zfcfbjf9sq"; depends=[Biobase CGHbase]; }; + CHRONOS = derive2 { name="CHRONOS"; version="1.6.0"; sha256="0az45ygm4xjkfjz1s4wyq4xqy9ymaf70rhayvavjz4fcnq03z4fz"; depends=[biomaRt circlize doParallel foreach graph openxlsx RBGL RCurl XML]; }; + CINdex = derive2 { name="CINdex"; version="1.6.0"; sha256="0lr0fqqm6fakavjx0pw3hhyxxdxgc6ncxp9qjw9macinmkgw5r96"; depends=[bitops dplyr GenomeInfoDb GenomicRanges gplots gridExtra IRanges png S4Vectors som stringr]; }; + CMA = derive2 { name="CMA"; version="1.36.0"; sha256="0l5ikjvfdpy054xsb21z2dz3mjsr3ni639dz2205kpp5l7nwlckd"; depends=[Biobase]; }; + CNAnorm = derive2 { name="CNAnorm"; version="1.24.0"; sha256="13d34cpg5x9nyl2vb2302p8v0x8mcx81qj4v0az242zchn679rbs"; depends=[DNAcopy]; }; + CNEr = derive2 { name="CNEr"; version="1.14.0"; sha256="1yf0zpy5qp1vfrjkkld1zp4xiy1jj7rk0b65cbpmhxk6la50wlbc"; depends=[annotate BiocGenerics Biostrings DBI GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 GO_db IRanges KEGGREST poweRlaw R_utils readr reshape2 RSQLite rtracklayer S4Vectors XVector]; }; + CNORdt = derive2 { name="CNORdt"; version="1.20.0"; sha256="0jrfv8jis5sd4x5zqmk0p5vcb23b42q128b7p35yyb59gjnnm5dz"; depends=[abind CellNOptR]; }; + CNORfeeder = derive2 { name="CNORfeeder"; version="1.18.0"; sha256="09h2f9asrpw6yrzpa7cq81bl3viz9nl9s0nfdm2af7bvlrwpyf79"; depends=[CellNOptR graph]; }; + CNORfuzzy = derive2 { name="CNORfuzzy"; version="1.20.0"; sha256="171i49bhfq8vy826m9kpg8pvpgs66al71yd5ydpmv14zkkjz3fnp"; depends=[CellNOptR nloptr]; }; + CNORode = derive2 { name="CNORode"; version="1.20.0"; sha256="1w6xwggfm0sh90n6qb4gdx4ljpav8ax20r667vk3ysq8vyd7fgqy"; depends=[CellNOptR genalg]; }; + CNPBayes = derive2 { name="CNPBayes"; version="1.8.0"; sha256="11083vhq1fgqzav5xlcada0ryyqyhgcxxr7c3ijwi6z7xrldx2fm"; depends=[BiocGenerics coda combinat dplyr GenomeInfoDb GenomicRanges ggplot2 gtools IRanges magrittr matrixStats mclust purrr RColorBrewer Rcpp reshape2 S4Vectors SummarizedExperiment tibble tidyr]; }; + CNTools = derive2 { name="CNTools"; version="1.34.0"; sha256="0nxdx3h5s0fgr4m4i1lizdcgxb7wjddzwxj28m5l67vm919734ka"; depends=[genefilter]; }; + CNVPanelizer = derive2 { name="CNVPanelizer"; version="1.8.0"; sha256="087m2r7fcw6z7ybbsnzxycsj289c2q6lq1d7zam1ilqhw1bi4rxi"; depends=[exomeCopy foreach GenomicRanges ggplot2 IRanges NOISeq openxlsx plyr Rsamtools S4Vectors]; }; + CNVrd2 = derive2 { name="CNVrd2"; version="1.16.0"; sha256="1rqjms7k3630kabbc6ish88308lqlrlbzkjflr5apcilc6rfyrx1"; depends=[DNAcopy ggplot2 gridExtra IRanges rjags Rsamtools VariantAnnotation]; }; + CNVtools = derive2 { name="CNVtools"; version="1.72.0"; sha256="0ihmgg5f0p7yhg0273jb785fcrhcw704vz8r6ban8c63wk0qbqb5"; depends=[survival]; }; + CODEX = derive2 { name="CODEX"; version="1.10.0"; sha256="1knfgii0n8grn4436aksk7f2xkk93ih2snvrp7p8pkr206kqadnq"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb IRanges Rsamtools S4Vectors]; }; + COHCAP = derive2 { name="COHCAP"; version="1.24.0"; sha256="1ggxn35hif4x4k1rbnxinf0pdqbg1n53wym9rm5zs6cnya4aimgj"; depends=[COHCAPanno gplots RColorBrewer WriteXLS]; }; + COMPASS = derive2 { name="COMPASS"; version="1.16.0"; sha256="1x1vcn37nr4mcx5q8zahyg654gbx0srxckxvz6shvprpdvgs83sn"; depends=[abind clue data_table dplyr knitr magrittr pdist plyr RColorBrewer Rcpp reshape2 rlang scales tidyr]; }; + CONFESS = derive2 { name="CONFESS"; version="1.6.0"; sha256="0kmvhwyzxz9ahvvzicigxal3r4ya8y5i090m7pi7d1p5arir7djl"; depends=[changepoint cluster contrast data_table EBImage ecp flexmix flowClust flowCore flowMeans flowMerge flowPeaks foreach ggplot2 limma MASS moments outliers plotrix raster readbitmap reshape2 SamSPECTRAL waveslim wavethresh zoo]; }; + CORREP = derive2 { name="CORREP"; version="1.44.0"; sha256="10bjv02x2xzanajfbsvbxd7s2s07z0gydx1ypmbfym41jjwac9ra"; depends=[e1071]; }; + COSNet = derive2 { name="COSNet"; version="1.12.0"; sha256="0x5kg4c5ml7ndqq81k5jy07fyra4q6nhhly6v7qd98gpmvrj6gnk"; depends=[]; }; + CRISPRseek = derive2 { name="CRISPRseek"; version="1.18.0"; sha256="0qvswjday1mjfa7009kgak09crgi6y7l1irc5hys4b8zmrnxzyc0"; depends=[BiocGenerics BiocParallel Biostrings BSgenome data_table hash IRanges S4Vectors seqinr]; }; + CRImage = derive2 { name="CRImage"; version="1.26.0"; sha256="1y1xs3agswi4da6mcra3pvssasd4cvhdr2sv664as0dg9m7r43a8"; depends=[aCGH DNAcopy e1071 EBImage foreach MASS sgeostat]; }; + CSAR = derive2 { name="CSAR"; version="1.30.0"; sha256="1915ns969hs46rh85y2krdqgrc81yxhxfv6h8narcni805rgj8n5"; depends=[GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; + CSSP = derive2 { name="CSSP"; version="1.16.0"; sha256="0xxsck347hvml9ppl9vkvh0f40mkfskwbasz93x5jqvkf046jxda"; depends=[]; }; + CVE = derive2 { name="CVE"; version="1.4.0"; sha256="0h8xcbnaamz479rax8c8ni7xnqsi43nvkshqhmlynfg60m8yl6cp"; depends=[ape ConsensusClusterPlus ggplot2 gplots jsonlite plyr RColorBrewer shiny WGCNA]; }; + CancerInSilico = derive2 { name="CancerInSilico"; version="1.4.0"; sha256="19pp282x994ykxczyvls8x71dfwzra21myxky4w2clhgabhqrw9h"; depends=[BH Rcpp testthat]; }; + CancerMutationAnalysis = derive2 { name="CancerMutationAnalysis"; version="1.20.0"; sha256="16csf668vxrngc5him5hbkj1bbzhi378sxwlfvh2dia2zipazg0w"; depends=[AnnotationDbi limma qvalue]; }; + CancerSubtypes = derive2 { name="CancerSubtypes"; version="1.4.0"; sha256="0n3la51s0pk3nmbdpv4z0y633qydajby3fy6nxwhpdkkxmlirrgc"; depends=[cluster ConsensusClusterPlus iCluster impute limma NMF sigclust SNFtool survival]; }; + Cardinal = derive2 { name="Cardinal"; version="1.10.0"; sha256="1yda7zzrmgyz58cg2myp6diwn39w353s4jkmp4d3yhvww2m9kyim"; depends=[Biobase BiocGenerics irlba lattice matter ProtGenerics signal sp]; }; + Category = derive2 { name="Category"; version="2.44.0"; sha256="0mkav04vbla0xfa0dssxdd0rjs589sxi83xklf5iq5hj3dm8y0i8"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI genefilter graph GSEABase Matrix RBGL]; }; + CausalR = derive2 { name="CausalR"; version="1.10.0"; sha256="0fj6ndrg78r6ss7ngmpja9dg482namrxxg6vdjdn4agiznk6jn92"; depends=[igraph]; }; + CellMapper = derive2 { name="CellMapper"; version="1.4.0"; sha256="16pa802b7lg398p8r4ijbiimzhg86fpyq54k13l7pmc4qp26405b"; depends=[S4Vectors]; }; + CellNOptR = derive2 { name="CellNOptR"; version="1.24.1"; sha256="0p6gksg6h5mbja0mfkh755cvhv7bzkwbg4dy0y34aighz945vy3a"; depends=[ggplot2 graph hash RBGL RCurl Rgraphviz XML]; }; + CexoR = derive2 { name="CexoR"; version="1.16.0"; sha256="1n3j5l3dlpigd0ihls8s3kwipajj0d9cp0v592f54v75q49fbsz6"; depends=[genomation GenomeInfoDb GenomicRanges idr IRanges RColorBrewer Rsamtools rtracklayer S4Vectors]; }; + ChAMP = derive2 { name="ChAMP"; version="2.9.10"; sha256="1c8sadqkx6cxd1hgms340m2jl3pxmkxk59yfbp69rqbrbjlx2zjy"; depends=[bumphunter ChAMPdata combinat dendextend DMRcate DNAcopy doParallel FEM GenomicRanges goseq Illumina450ProbeVariants_db IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest illuminaio impute isva limma marray matrixStats minfi missMethyl plotly plyr preprocessCore prettydoc quadprog qvalue RColorBrewer rmarkdown RPMM shiny shinythemes sva wateRmelon]; }; + ChIPComp = derive2 { name="ChIPComp"; version="1.8.0"; sha256="1nj3903nhii76v6jrm7bfw8kngbq525zikb3nwhvmp4905c77z40"; depends=[BiocGenerics BSgenome_Hsapiens_UCSC_hg19 BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicRanges IRanges limma Rsamtools rtracklayer S4Vectors]; }; + ChIPQC = derive2 { name="ChIPQC"; version="1.14.0"; sha256="1nnmgzad7kzydrmz374f9xvf8s13q6vhanz93v6d9jqh6jnd5di0"; depends=[Biobase BiocGenerics BiocParallel chipseq DiffBind GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gtools IRanges Nozzle_R1 reshape2 Rsamtools S4Vectors TxDb_Celegans_UCSC_ce6_ensGene TxDb_Dmelanogaster_UCSC_dm3_ensGene TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene TxDb_Rnorvegicus_UCSC_rn4_ensGene]; }; + ChIPXpress = derive2 { name="ChIPXpress"; version="1.22.0"; sha256="0wcs7gw0kgvbk1f4i8j9cr8kwv1lj45zv9q069cify78rdb106rb"; depends=[affy biganalytics bigmemory Biobase ChIPXpressData frma GEOquery]; }; + ChIPanalyser = derive2 { name="ChIPanalyser"; version="1.0.0"; sha256="02w4k41wx9cqfk0zjzcv8vdfgwv9rswijmdrsbmcpbrmbwn2jlxi"; depends=[Biostrings BSgenome GenomicRanges IRanges RcppRoll S4Vectors]; }; + ChIPexoQual = derive2 { name="ChIPexoQual"; version="1.2.0"; sha256="0n0bpwiff3lbirvmzbamjvxa2957wsl0kixfh1hnsr0hqgs3swqf"; depends=[BiocParallel biovizBase broom data_table dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 hexbin IRanges RColorBrewer rmarkdown Rsamtools S4Vectors scales viridis]; }; + ChIPpeakAnno = derive2 { name="ChIPpeakAnno"; version="3.12.7"; sha256="1zab489d7a6bh6ylc68x6yn47gdkmr7p3677grx9l2qafrryjr04"; depends=[AnnotationDbi Biobase BiocGenerics BiocInstaller biomaRt Biostrings BSgenome DBI DelayedArray ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GO_db graph idr IRanges limma matrixStats multtest RBGL regioneR Rsamtools S4Vectors seqinr SummarizedExperiment VennDiagram]; }; + ChIPseeker = derive2 { name="ChIPseeker"; version="1.14.1"; sha256="1819hny2azpj3wpp09yyqllx668p98ja3ds5a65c0hxy8vbmjxpz"; depends=[AnnotationDbi BiocGenerics boot DOSE dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gplots gridBase gtools IRanges magrittr plotrix RColorBrewer rtracklayer S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene UpSetR]; }; + ChIPseqR = derive2 { name="ChIPseqR"; version="1.32.0"; sha256="0igqlfr5grhkr7dsdyg3c31d3r1wpn413vxmzlckiimfwdi35rqv"; depends=[BiocGenerics Biostrings fBasics GenomicRanges HilbertVis IRanges S4Vectors ShortRead timsac]; }; + ChIPsim = derive2 { name="ChIPsim"; version="1.32.0"; sha256="01kmhzyvnp03v9xydm9xrrkdmlf5dpsnzzcf13i9r03x3m44r4ga"; depends=[Biostrings IRanges ShortRead XVector]; }; + ChemmineOB = derive2 { name="ChemmineOB"; version="1.16.2"; sha256="0zrg6f5cg54f1bpwjhx2h97w267jr2gyncgfyjs7njkjwwrl9ads"; depends=[BH BiocGenerics Rcpp zlibbioc]; }; + ChemmineR = derive2 { name="ChemmineR"; version="2.30.2"; sha256="1n83s6bl5lcqgrs30g307vji3ras39pagwgfwcaknhdhwv5wx9d4"; depends=[BH BiocGenerics DBI digest ggplot2 gridExtra Rcpp RCurl rjson]; }; + Chicago = derive2 { name="Chicago"; version="1.6.0"; sha256="1s2qrz7qbdn3nbkjqyyrmh04kbdrknc7w5cdasg5sch8znnvq6gw"; depends=[data_table Delaporte Hmisc MASS matrixStats]; }; + ChromHeatMap = derive2 { name="ChromHeatMap"; version="1.32.0"; sha256="0kshy9ri174ksgdnifmf57mjkyjczcx98x98idjmjcxlwrzx4xjr"; depends=[annotate AnnotationDbi Biobase BiocGenerics GenomicRanges IRanges rtracklayer]; }; + ClassifyR = derive2 { name="ClassifyR"; version="1.12.2"; sha256="1ybcsvh45i4dgx0b7z1wxxh51ydfkx5bh75343f1dpwl1igp8cjw"; depends=[Biobase BiocParallel locfit ROCR]; }; + Clomial = derive2 { name="Clomial"; version="1.14.0"; sha256="1hd135pcs5sngg1dw93b3f1qnrbl3d1ynyk0wbaal9wzys7fzmcq"; depends=[matrixStats permute]; }; + Clonality = derive2 { name="Clonality"; version="1.26.0"; sha256="1l19zpnnrx1xz5dc2mvyljlllhlk0gjld8lk675g8iqhm3i8z861"; depends=[DNAcopy]; }; + ClusterJudge = derive2 { name="ClusterJudge"; version="1.0.0"; sha256="0iff5dsvl92gfidgly0gyv4ivb97j45rmmc5rlllij1z1p0mjrhq"; depends=[httr infotheo jsonlite lattice latticeExtra]; }; + ClusterSignificance = derive2 { name="ClusterSignificance"; version="1.6.0"; sha256="19wjjzv2f6lkkl0vyyx9jw4y6dqvl5qz7ppk85j3k3r9yhjlpnv1"; depends=[pracma princurve RColorBrewer scatterplot3d]; }; + CoCiteStats = derive2 { name="CoCiteStats"; version="1.50.0"; sha256="0k8nf7yzbwyyxxgcn4qa7f254vngkabbaxs40ijyyzhwldwdqcjn"; depends=[AnnotationDbi org_Hs_eg_db]; }; + CoGAPS = derive2 { name="CoGAPS"; version="2.12.0"; sha256="1yhxk94r9l0yz03n3d6gd78daazgbgy84f2840al04b74mr89bx8"; depends=[BH cluster doParallel foreach ggplot2 gplots RColorBrewer Rcpp RcppArmadillo reshape2 shiny]; }; + CoRegNet = derive2 { name="CoRegNet"; version="1.16.0"; sha256="1d702vgki4wqx355y5v83ajga3j477l2bgvb0lbpkxjaxi57zm80"; depends=[arules igraph shiny]; }; + CompGO = derive2 { name="CompGO"; version="1.14.0"; sha256="0acjn3w7axq4674p2jsc71hga32svd2fc3xn2mrs85i9bcckwmv5"; depends=[GenomicFeatures ggplot2 pathview pcaMethods RDAVIDWebService reshape2 Rgraphviz rtracklayer TxDb_Mmusculus_UCSC_mm9_knownGene]; }; + ComplexHeatmap = derive2 { name="ComplexHeatmap"; version="1.17.1"; sha256="1x6kp55iqqsd8bhdl3qch95nfiy2y46ldbbsx1sj1v8f0b0ywwcy"; depends=[circlize colorspace GetoptLong GlobalOptions RColorBrewer]; }; + ConsensusClusterPlus = derive2 { name="ConsensusClusterPlus"; version="1.42.0"; sha256="1pjw7r4x9867zjvdva58jsgask94ydqzrwzn3z6li47bin5ic0m1"; depends=[ALL Biobase cluster]; }; + CopywriteR = derive2 { name="CopywriteR"; version="2.10.0"; sha256="17fy2lc5yf3nh6v077kv87h53n263hqz2540lzrl0vjiqrl2plca"; depends=[BiocParallel chipseq CopyhelpeR data_table DNAcopy futile_logger GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges matrixStats Rsamtools S4Vectors]; }; + CorMut = derive2 { name="CorMut"; version="1.20.0"; sha256="0dy02halbp57vmfbjgjhkgc6icxrvy9nxpb92arrgl6ly8bflcwx"; depends=[igraph seqinr]; }; + Cormotif = derive2 { name="Cormotif"; version="1.24.0"; sha256="1inxd86lndp2jmdzvjj222697safcppr0gzhcfrcj4bygl36ma6v"; depends=[affy limma]; }; + CountClust = derive2 { name="CountClust"; version="1.4.1"; sha256="08097iyxx2qm675bnqm8c4hq6rwyqsdfzxkf46mllpyf2mk3wwwf"; depends=[cowplot flexmix ggplot2 gtools limma maptpx picante plyr reshape2 slam SQUAREM]; }; + CoverageView = derive2 { name="CoverageView"; version="1.16.0"; sha256="1091mxiclb3zhr48bdj7z8gi3v69l4w25cfpfbxhhp70rffn9xfr"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors]; }; + CrispRVariants = derive2 { name="CrispRVariants"; version="1.6.0"; sha256="15za6ysnnjfwmiq2dhbpr3kww6c2jvc2y1mf8rfpqx56bd1dh3cb"; depends=[AnnotationDbi BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges reshape2 Rsamtools S4Vectors]; }; + CytoML = derive2 { name="CytoML"; version="1.4.1"; sha256="1jj79adwrzwx012xvw3czv0m94jc3j2ibpijdfbz8fpjhynrzwqb"; depends=[base64enc Biobase data_table flowCore flowUtils flowWorkspace ggcyto graph jsonlite ncdfFlow openCyto plyr RBGL Rgraphviz XML]; }; + DAPAR = derive2 { name="DAPAR"; version="1.10.3"; sha256="1xkfw2zjy8wj8x5mddyzw1632zhb2dvdnqp5ikmf1n1bi1mq0ya4"; depends=[AnnotationDbi Cairo clusterProfiler cp4p DAPARdata doParallel dplyr foreach ggplot2 gplots graph highcharter imp4p impute imputeLCMD knitr lattice limma lme4 Matrix MSnbase norm openxlsx pcaMethods png preprocessCore RColorBrewer readxl reshape2 scales siggenes tidyr tmvtnorm vioplot]; }; + DART = derive2 { name="DART"; version="1.26.0"; sha256="15hqsdi7pa1qn5c5af2izhf609c7lmb0zsv2qwyc9xbf7dn42qmf"; depends=[igraph]; }; + DASC = derive2 { name="DASC"; version="0.99.11"; sha256="1wm43kgvq3wkwp8hmz70m9c7yxxjsanpqxvcm6x63bna02ysb90y"; depends=[Biobase cvxclustr NMF]; }; + DBChIP = derive2 { name="DBChIP"; version="1.22.0"; sha256="07psmmvcdl4r5m71kccd9rd3vk521ilhwmcll37pfrmb16s1856x"; depends=[DESeq edgeR]; }; + DChIPRep = derive2 { name="DChIPRep"; version="1.8.0"; sha256="1ii7mdppqk3gg3ly9x35d0ij2grmi7678dli4xfd2mzkzyc5b6wm"; depends=[assertthat ChIPpeakAnno DESeq2 fdrtool GenomicRanges ggplot2 plyr purrr reshape2 S4Vectors smoothmest soGGi SummarizedExperiment tidyr]; }; + DECIPHER = derive2 { name="DECIPHER"; version="2.6.0"; sha256="1rc9vipclkiib71684dl0qrd6yll672xxbig22x8v99hscdd3d8y"; depends=[Biostrings DBI IRanges RSQLite S4Vectors XVector]; }; + DEDS = derive2 { name="DEDS"; version="1.52.0"; sha256="18gpj5xk5byiqv548s0vcvp8l5f0k49k8z9iq5qsn53jhh53f26s"; depends=[]; }; + DEFormats = derive2 { name="DEFormats"; version="1.6.1"; sha256="1wix5n76438896sz62cgsrzjjx4cw7mhxgvsq43w2vpsp3gdrp59"; depends=[checkmate data_table DESeq2 edgeR GenomicRanges SummarizedExperiment]; }; + DEGraph = derive2 { name="DEGraph"; version="1.30.0"; sha256="083w1vrp0s3xkiz1qm3d03fi1dm69gspq7pqadqwrc3qypjkp3hi"; depends=[graph KEGGgraph lattice mvtnorm NCIgraph R_methodsS3 R_utils RBGL Rgraphviz rrcov]; }; + DEGreport = derive2 { name="DEGreport"; version="1.14.1"; sha256="0mbqmkgp9l7ygrh6dsf77mf9fqrql7i4wpw5rg87l6p2misz6662"; depends=[Biobase BiocGenerics cluster ComplexHeatmap ConsensusClusterPlus cowplot DESeq2 dplyr edgeR ggplot2 ggrepel knitr logging magrittr Nozzle_R1 psych quantreg reshape rlang S4Vectors scales SummarizedExperiment tibble tidyr]; }; + DEGseq = derive2 { name="DEGseq"; version="1.32.0"; sha256="0dh1ig8nj3mf0f8masf48imkkadma0dywbraydcy3cw9vdnc5c7j"; depends=[qvalue samr]; }; + DEP = derive2 { name="DEP"; version="1.0.1"; sha256="0glkq6xlhcsr364zl4nkc7g3gnscv0yb3kcyvhzgm3bbfvd9q7ac"; depends=[assertthat Biobase broom circlize ComplexHeatmap dplyr DT fdrtool ggplot2 ggrepel gridExtra imputeLCMD limma MSnbase purrr RColorBrewer readr rmarkdown shiny shinydashboard SummarizedExperiment tibble tidyr vsn]; }; + DESeq = derive2 { name="DESeq"; version="1.30.0"; sha256="0mn5w3cy16iwwk8zxs7za6aa6cnrca75z0g45zd5zh1py5d7nfv9"; depends=[Biobase BiocGenerics genefilter geneplotter lattice locfit MASS RColorBrewer]; }; + DESeq2 = derive2 { name="DESeq2"; version="1.18.1"; sha256="1iyimg1s0x5pdmvl8x08s8h0v019y0nhjzs50chagbpk2x91fsmv"; depends=[Biobase BiocGenerics BiocParallel genefilter geneplotter GenomicRanges ggplot2 Hmisc IRanges locfit Rcpp RcppArmadillo S4Vectors SummarizedExperiment]; }; + DEXSeq = derive2 { name="DEXSeq"; version="1.24.2"; sha256="18nh8ynxirfwkmc4sawdxgl7w1sl9ny5zpv8zbhv9vi5vgb8pxmj"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel biomaRt DESeq2 genefilter geneplotter GenomicRanges hwriter IRanges RColorBrewer Rsamtools S4Vectors statmod stringr SummarizedExperiment]; }; + DEsubs = derive2 { name="DEsubs"; version="1.4.0"; sha256="1i9blymzj18r9646vac9grrjxw6xar8m6chn1dgdila17jag1wlp"; depends=[circlize DESeq DESeq2 EBSeq edgeR ggplot2 graph igraph jsonlite limma locfit Matrix NBPSeq pheatmap RBGL samr]; }; + DFP = derive2 { name="DFP"; version="1.36.0"; sha256="117gmzcgr9wr9wb7g0rm7wlrakd76ys1frhmhx1k6ps97ibxlz1k"; depends=[Biobase]; }; + DMCHMM = derive2 { name="DMCHMM"; version="1.0.0"; sha256="1y0wmxks51h0d21v8g4mryq7kzq49khhpa88fbhza9xp2bmwk358"; depends=[BiocParallel calibrate fdrtool GenomicRanges IRanges multcomp rtracklayer S4Vectors SummarizedExperiment]; }; + DMRScan = derive2 { name="DMRScan"; version="1.4.6"; sha256="10b9qlr0la3ilrw44vcq4y8pg7284adrh506wbx7f9ipgka8qx4y"; depends=[GenomicRanges IRanges MASS Matrix mvtnorm RcppRoll]; }; + DMRcaller = derive2 { name="DMRcaller"; version="1.10.0"; sha256="0z5rzzbnlw3m1yp8d5y2y4rplz73q06kh5gkf57rmpg1pzkfbvca"; depends=[GenomicRanges IRanges Rcpp RcppRoll S4Vectors]; }; + DMRcate = derive2 { name="DMRcate"; version="1.14.0"; sha256="1kzb6lai3969v8sjwwzrzm9x2adngh5ij2jf0ig073aab3cfibh6"; depends=[DMRcatedata DSS GenomicRanges Gviz IRanges limma minfi missMethyl plyr S4Vectors]; }; + DMRforPairs = derive2 { name="DMRforPairs"; version="1.14.0"; sha256="1q489w68q4mxg7f8h36f7gmwbldc2fq3a69k6b25d3wg7583v4ax"; depends=[GenomicRanges Gviz R2HTML]; }; + DNABarcodes = derive2 { name="DNABarcodes"; version="1.8.0"; sha256="0x3pwln8v57w045kxr6hq778hpy5f21gfq5m6wj41rq9awvx5s2p"; depends=[BH Matrix Rcpp]; }; + DNAcopy = derive2 { name="DNAcopy"; version="1.52.0"; sha256="127il5rlg1hzjlhwhs64x3nm18p00q1pd9ckb2b9ifl0rax95wai"; depends=[]; }; + DNAshapeR = derive2 { name="DNAshapeR"; version="1.6.0"; sha256="1p44bi5pysrc4pw63zrhxy5q4yqh81kncnp585cjlcbbbyqwz8sv"; depends=[Biostrings fields GenomicRanges Rcpp]; }; + DOQTL = derive2 { name="DOQTL"; version="1.14.0"; sha256="0hpvh84la7i9m5l9c1hrhmr62f031dyv7nq6aai58bd0lqh9izp5"; depends=[annotate annotationTools Biobase BiocGenerics biomaRt BSgenome_Mmusculus_UCSC_mm10 corpcor doParallel foreach fpc GenomicRanges hwriter IRanges iterators mclust QTLRel regress rhdf5 Rsamtools RUnit VariantAnnotation XML]; }; + DOSE = derive2 { name="DOSE"; version="3.4.0"; sha256="10dw82car6vi13lic2dghm1gw3a8d2s6nrdhh69fhb7gj6lhr5ds"; depends=[AnnotationDbi BiocParallel DO_db fgsea ggplot2 GOSemSim igraph qvalue reshape2 rvcheck S4Vectors scales]; }; + DRIMSeq = derive2 { name="DRIMSeq"; version="1.6.0"; sha256="17z8flsb5ngnkcd1g1fj3m0yms71w6q45abc30wwvcnxrg1m9scn"; depends=[BiocGenerics BiocParallel edgeR GenomicRanges ggplot2 IRanges limma MASS reshape2 S4Vectors]; }; + DSS = derive2 { name="DSS"; version="2.26.0"; sha256="0an0nr64f46s9smli0lpj6z62b25dd6xmyk92ndx9kp38vldmv0z"; depends=[Biobase bsseq DelayedArray]; }; + DTA = derive2 { name="DTA"; version="2.24.0"; sha256="0729w0zkcnwk3rcf4ziz5xw4fsv4dq9p9ri8yizxsxiara4lnhlw"; depends=[LSD scatterplot3d]; }; + DaMiRseq = derive2 { name="DaMiRseq"; version="1.2.0"; sha256="0m16yh2cfqb5ysdir4b5c3v73204ac5fa0lyvi6x1djkm6nj04hh"; depends=[caret corrplot DESeq2 e1071 EDASeq FactoMineR FSelector ggplot2 Hmisc kknn limma lubridate MASS pheatmap plsVarSel randomForest RColorBrewer reshape2 SummarizedExperiment sva]; }; + DeMAND = derive2 { name="DeMAND"; version="1.8.0"; sha256="1gf5c3m0jwgipz1wl8viq781kfj0nmpa29cjad9qgrkpihfagh03"; depends=[KernSmooth]; }; + DeconRNASeq = derive2 { name="DeconRNASeq"; version="1.20.0"; sha256="1877jcl6l2chfa6djv227hf2bqcb4w7frnhmrlh6rzqssq5zrx43"; depends=[ggplot2 limSolve pcaMethods]; }; + DeepBlueR = derive2 { name="DeepBlueR"; version="1.4.1"; sha256="13qg2nmmhicl1n4ry38syz6ah6mvq2vw6c53id7piyyk0xj3rhrc"; depends=[data_table diffr dplyr filehash foreach GenomeInfoDb GenomicRanges R_utils RCurl rjson rtracklayer settings stringr withr XML]; }; + DelayedArray = derive2 { name="DelayedArray"; version="0.4.1"; sha256="0s7h2giyvz04cg6248kbbzpwhxdrpnsvl2s8k5c8ricisd9aaz4b"; depends=[BiocGenerics IRanges matrixStats S4Vectors]; }; + DelayedMatrixStats = derive2 { name="DelayedMatrixStats"; version="1.0.3"; sha256="1cxjbjdq9hg9cm95rci0al7a4pk2h73ym276ahw9q4977zbg6381"; depends=[DelayedArray IRanges Matrix matrixStats S4Vectors]; }; + DiffBind = derive2 { name="DiffBind"; version="2.6.6"; sha256="1sm5h6nq77hjfis6kr1nqyizcxgfz87dgpqc4fxlfqkmsd9n3vkp"; depends=[amap BiocParallel DESeq2 dplyr edgeR GenomicAlignments GenomicRanges ggplot2 ggrepel gplots IRanges lattice limma locfit RColorBrewer Rcpp Rsamtools S4Vectors SummarizedExperiment systemPipeR zlibbioc]; }; + DiffLogo = derive2 { name="DiffLogo"; version="2.2.0"; sha256="0nc07vn9ldhnv9wm5i9b7axkvsi7v5gcf8saa6zlkr7mf5lsinhg"; depends=[cba]; }; + Director = derive2 { name="Director"; version="1.4.0"; sha256="1yq4amwflg168fgdr91lh4c8y3azw2fdsbp2b0j6mnhcjqgmaxk8"; depends=[htmltools]; }; + DirichletMultinomial = derive2 { name="DirichletMultinomial"; version="1.20.0"; sha256="1c4s6x0qm20556grcd1xys9kkpnlzpasaai474malwcg6qvgi4x1"; depends=[BiocGenerics IRanges S4Vectors]; }; + Doscheda = derive2 { name="Doscheda"; version="1.0.0"; sha256="04dzr26lvhcd9h6b5s61csygrc1357b8d6zxbn955s6crbr5p2ns"; depends=[affy calibrate corrgram d3heatmap drc DT ggplot2 gridExtra httr jsonlite limma matrixStats prodlim readxl reshape2 shiny shinydashboard stringr vsn]; }; + DriverNet = derive2 { name="DriverNet"; version="1.18.0"; sha256="068ps1ril55fhfbxlzchrjyx75xvqqh8ny7gp99k6hcmksjnbbsb"; depends=[]; }; + DrugVsDisease = derive2 { name="DrugVsDisease"; version="2.20.1"; sha256="0bw9bwwacp9mznldl61r5znsy34yb1zkil6fd9ilxp8wmxicphjk"; depends=[affy annotate ArrayExpress BiocGenerics biomaRt cMap2data DrugVsDiseasedata GEOquery hgu133a_db hgu133a2_db hgu133plus2_db limma qvalue RUnit xtable]; }; + DupChecker = derive2 { name="DupChecker"; version="1.16.0"; sha256="1fxcs2vljp2rh9qp2xmqp8ri6v41gzdy51jhhv33rxfgh9jz70g5"; depends=[R_utils RCurl]; }; + DynDoc = derive2 { name="DynDoc"; version="1.56.0"; sha256="1zc43f2v7qh44slc0za71jb0a5fsqp55y5fbnb9fnd6139im5vxc"; depends=[]; }; + EBImage = derive2 { name="EBImage"; version="4.20.1"; sha256="0xwq9jd9sn5h3al7k03byr4diyrmk4jx344spdcaw58a830w9q7j"; depends=[abind BiocGenerics fftwtools htmltools htmlwidgets jpeg locfit png RCurl tiff]; }; + EBSEA = derive2 { name="EBSEA"; version="1.6.0"; sha256="13qgmcwv4b06zgaalqf9sq0wkkhnf38h98fw2dqql8z9w3n5sbnz"; depends=[edgeR gtools limma]; }; + EBSeq = derive2 { name="EBSeq"; version="1.18.0"; sha256="0pr7xaf64wn3ry358raqd7vpp7p3zq88qp9jkx6xf9f83bmyx7mw"; depends=[blockmodeling gplots testthat]; }; + EBSeqHMM = derive2 { name="EBSeqHMM"; version="1.12.0"; sha256="1bg4y0jqf034p400j30yskb0fhxk9mlnbrmdcr29r2212xra4g7b"; depends=[EBSeq]; }; + EBarrays = derive2 { name="EBarrays"; version="2.42.0"; sha256="0hd297adyp3fkppmzncdcn0y7kvgixkp460816vsrzphs4v2fi1m"; depends=[Biobase cluster lattice]; }; + EBcoexpress = derive2 { name="EBcoexpress"; version="1.22.0"; sha256="1k9n95hqhd5rb811vc1idjslv6m5x3s30zv9h545h26cklqqmd76"; depends=[EBarrays mclust minqa]; }; + EDASeq = derive2 { name="EDASeq"; version="2.12.0"; sha256="07zm89zcivyn2261aq9grqmly8ji482kr9h9dyfknfdfrpv7jpwv"; depends=[AnnotationDbi aroma_light Biobase BiocGenerics biomaRt Biostrings DESeq GenomicFeatures GenomicRanges IRanges Rsamtools ShortRead]; }; + EDDA = derive2 { name="EDDA"; version="1.16.0"; sha256="000kp07khndncb9d4gql8gkjwrv3r08qf118g51zcmfrpzn26a30"; depends=[baySeq DESeq edgeR Rcpp ROCR snow]; }; + EGAD = derive2 { name="EGAD"; version="1.6.0"; sha256="0dxbw39dymwxd6hvnx9c1y97z6d2br55c0md1l72wajf5qa8nvfc"; depends=[affy arrayQualityMetrics Biobase GEOquery gplots igraph impute limma MASS Matrix plyr RColorBrewer RCurl zoo]; }; + EGSEA = derive2 { name="EGSEA"; version="1.6.1"; sha256="1srjms8xa9qnnm6mzlgmdqk0zd4485k6d20ygzqqi0jj86xa6ava"; depends=[AnnotationDbi Biobase DT edgeR EGSEAdata gage ggplot2 Glimma globaltest gplots GSVA HTMLUtils htmlwidgets hwriter limma metap org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db PADOG pathview plotly RColorBrewer safe stringi topGO]; }; + ELBOW = derive2 { name="ELBOW"; version="1.14.0"; sha256="0hw7sb20id7zxdashrsxxhcw96z0m3yp12gizq4x5gw53iipw73w"; depends=[]; }; + ELMER = derive2 { name="ELMER"; version="2.2.7"; sha256="0qdl79x7g1pd8z16s3zja2hvmf9bmr6520gh7ghavdh6qaxqji0h"; depends=[biomaRt circlize ComplexHeatmap doParallel downloader dplyr ELMER_data GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggrepel gridExtra Gviz IRanges lattice magrittr Matrix MultiAssayExperiment plotly plyr readr reshape rvest S4Vectors SummarizedExperiment TCGAbiolinks xml2]; }; + EMDomics = derive2 { name="EMDomics"; version="2.8.0"; sha256="09lkg7c1sl5jmg8z1yfaqw5hy3jcpb0wyh0l9sc14hbsncvq1nmh"; depends=[BiocParallel CDFt emdist ggplot2 matrixStats preprocessCore]; }; + ENCODExplorer = derive2 { name="ENCODExplorer"; version="2.4.0"; sha256="0mw3pgbpk1q0jgzcb3pk2kgdw9igh1zm4bywzfzg7k1k1xjzk3yy"; depends=[data_table dplyr DT jsonlite RCurl shiny shinythemes stringi stringr tidyr]; }; + ENVISIONQuery = derive2 { name="ENVISIONQuery"; version="1.26.0"; sha256="0vc9d17m5bdjj4wqcl5lr99bv89yzs75m94rfckjjzvx7j6cmqcx"; depends=[rJava XML]; }; + ENmix = derive2 { name="ENmix"; version="1.14.0"; sha256="117jp47hpm276x4q25jwqfagymvay0qk3ji5l9xvrj74piwqpgwh"; depends=[doParallel foreach geneplotter impute MASS minfi preprocessCore SummarizedExperiment sva wateRmelon]; }; + EasyqpcR = derive2 { name="EasyqpcR"; version="1.20.0"; sha256="06lmq3pp0j86rv9bgs809r30qscgpxv5vjbkccf32q9wv82vd7hw"; depends=[gWidgetsRGtk2 matrixStats plotrix plyr]; }; + EmpiricalBrownsMethod = derive2 { name="EmpiricalBrownsMethod"; version="1.6.0"; sha256="1wv1anm4bwm2kqi9lqn06bl1w17q6wvc1v2amrifbqjbmi5k7g8y"; depends=[]; }; + EnrichedHeatmap = derive2 { name="EnrichedHeatmap"; version="1.9.2"; sha256="0ffyb40qcvpjqval78146w8wvk3ng7v1ipdwnqkzj705gqkwbw9y"; depends=[ComplexHeatmap GenomicRanges GetoptLong IRanges locfit matrixStats Rcpp]; }; + EnrichmentBrowser = derive2 { name="EnrichmentBrowser"; version="2.8.6"; sha256="1vxnl0n34ygl4fx28s8zmp71b8hidlp4sn34k1cfkw7hiaf2gg9n"; depends=[AnnotationDbi BiocFileCache biocGraph ComplexHeatmap DESeq2 EDASeq edgeR geneplotter GO_db graph GSEABase hwriter KEGGgraph KEGGREST limma MASS pathview rappdirs ReportingTools Rgraphviz S4Vectors safe SPIA SummarizedExperiment topGO]; }; + EpiDISH = derive2 { name="EpiDISH"; version="1.0.0"; sha256="065bvrfsssf5y4j9axqdcybqb5i8y2hnl09f9jr44bpbay34ay5f"; depends=[e1071 MASS quadprog]; }; + EventPointer = derive2 { name="EventPointer"; version="1.2.0"; sha256="1yh6yhaf8c2rp8f4ipsk014552pplb28cl5z7wjwvarjb21waj05"; depends=[affxparser doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges graph igraph limma MASS Matrix matrixStats nnls prodlim RBGL S4Vectors SGSeq stringr SummarizedExperiment]; }; + ExiMiR = derive2 { name="ExiMiR"; version="2.20.0"; sha256="0saxway680972dmn6q1gbbmkxcwv08hl2bq973qbyrv5drg6g4vv"; depends=[affy affyio Biobase limma preprocessCore]; }; + ExperimentHub = derive2 { name="ExperimentHub"; version="1.4.0"; sha256="1hgg3x6r4ldlqjv8by6vv5n5f8h647y3lvxwrmi79c6dvrghp0j3"; depends=[AnnotationHub BiocGenerics BiocInstaller curl S4Vectors]; }; + ExperimentHubData = derive2 { name="ExperimentHubData"; version="1.4.0"; sha256="07nd9n09naq8p276fbnad3wp95y11n5ws65xncf66i7356a3rkw4"; depends=[AnnotationHubData BiocCheck BiocGenerics BiocInstaller curl DBI ExperimentHub httr S4Vectors]; }; + ExpressionAtlas = derive2 { name="ExpressionAtlas"; version="1.6.0"; sha256="099xkp39mbdg1xm6mydnpwrkbyn3y719xf1s4xyva0nkwx1g14b8"; depends=[Biobase httr limma S4Vectors SummarizedExperiment XML xml2]; }; + ExpressionView = derive2 { name="ExpressionView"; version="1.30.0"; sha256="1kjp8ndbx5bhk941ba6nza42h8zi97xwam2q0pf8pk168sch41kr"; depends=[AnnotationDbi bitops caTools eisa GO_db isa2 KEGG_db]; }; + FEM = derive2 { name="FEM"; version="3.6.0"; sha256="0bs7p9lqp6bi7c9j8vi4gbj8md14cqc9vxxkfb0bc35mr5641q4d"; depends=[AnnotationDbi BiocGenerics corrplot graph igraph impute limma marray Matrix org_Hs_eg_db]; }; + FGNet = derive2 { name="FGNet"; version="3.12.0"; sha256="1f33k7dx7f97kzjpq1jvs614vjsyg3yd03s2y7xxwhydmx02n7vs"; depends=[hwriter igraph plotrix png R_utils RColorBrewer reshape2 XML]; }; + FISHalyseR = derive2 { name="FISHalyseR"; version="1.12.0"; sha256="07q5paypybw8qq17wyl7qqlrdy5kfg2k24rj2ic4gjgb6qiic38b"; depends=[abind EBImage]; }; + FRGEpistasis = derive2 { name="FRGEpistasis"; version="1.14.0"; sha256="1nyw8h4kjddn75878adhlilwjnm4wlyhksyp2ygx6cm35fbqa2v3"; depends=[fda MASS]; }; + FamAgg = derive2 { name="FamAgg"; version="1.6.0"; sha256="0p87aidqbzdwhihsnaammv1i5yb0rvhs0xrjlmq64z6q9ffj7k32"; depends=[BiocGenerics gap igraph kinship2 Matrix survey]; }; + FindMyFriends = derive2 { name="FindMyFriends"; version="1.8.0"; sha256="13f6hdjn4l5xfrdskq2abpzczxcm8sy71fqpfj6hsxzj06fz9a36"; depends=[Biobase BiocGenerics BiocParallel Biostrings digest dplyr filehash ggdendro ggplot2 gtable igraph IRanges kebabs Matrix Rcpp reshape2 S4Vectors]; }; + FitHiC = derive2 { name="FitHiC"; version="1.4.0"; sha256="12ylhrppi051m7nqsgq95kzd9g9wmp34i0zzfi55cjqawlpx7c6n"; depends=[data_table fdrtool Rcpp]; }; + FlowRepositoryR = derive2 { name="FlowRepositoryR"; version="1.10.0"; sha256="0mgqnmznqpy8ikzg1829bjgxnznm43wkgirhpgfskdxfzr4zqs3a"; depends=[jsonlite RCurl XML]; }; + FlowSOM = derive2 { name="FlowSOM"; version="1.10.0"; sha256="0kgzyngm36wzwgsrf40p00543w4spisph78yp5hl5i4hghh4zkij"; depends=[BiocGenerics ConsensusClusterPlus flowCore flowUtils igraph tsne XML]; }; + FourCSeq = derive2 { name="FourCSeq"; version="1.12.0"; sha256="08fq289m8g7fgmsrph1gq45q6zpfnrzpm0n4qyf2vc5hsdgnm4qh"; depends=[Biobase Biostrings DESeq2 fda GenomicAlignments GenomicRanges ggbio ggplot2 gtools LSD Matrix reshape2 Rsamtools rtracklayer SummarizedExperiment]; }; + FunChIP = derive2 { name="FunChIP"; version="1.4.0"; sha256="0gx2yjid47p9q7f89823avqj4r367s1ifvh4p2g351gzij63p9ab"; depends=[doParallel fda foreach GenomeInfoDb GenomicAlignments GenomicRanges RColorBrewer Rcpp Rsamtools shiny]; }; + FunciSNP = derive2 { name="FunciSNP"; version="1.22.0"; sha256="1lgvca8npk1092dyl5jhx46ir46b3ab5jgshj5b19dg0bdzi0fj1"; depends=[Biobase BiocGenerics ChIPpeakAnno FunciSNP_data GenomicRanges ggplot2 IRanges plyr reshape Rsamtools rtracklayer S4Vectors scales snpStats TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; }; + GA4GHclient = derive2 { name="GA4GHclient"; version="1.2.0"; sha256="1k9rd1q47ac75h3vw54kxi89g8w11bis6cz26xkvhdcim97bxs10"; depends=[BiocGenerics Biostrings dplyr GenomeInfoDb GenomicRanges httr IRanges jsonlite S4Vectors VariantAnnotation]; }; + GA4GHshiny = derive2 { name="GA4GHshiny"; version="1.0.0"; sha256="1q461l1dy7fsl1y081iyijwizk342q7v5l0irpmx1gnp2kpmvpr2"; depends=[AnnotationDbi BiocGenerics dplyr DT GA4GHclient GenomeInfoDb GenomicFeatures openxlsx purrr S4Vectors shiny shinyjs shinythemes tidyr]; }; + GAprediction = derive2 { name="GAprediction"; version="1.4.0"; sha256="10hknskkfvpzjzcih1h6pl68p9ix9zh98ym1gzw68qjx0mhlm591"; depends=[glmnet Matrix]; }; + GEM = derive2 { name="GEM"; version="1.4.0"; sha256="0r6zgsyfwra3qx1vis7a7mr5aiqyj7rpgs3cqdir2yjlg3y01r1w"; depends=[ggplot2]; }; + GENESIS = derive2 { name="GENESIS"; version="2.8.1"; sha256="0w3xrw6a1fkcp49nyarkp4yykjk79gqq7rzwixdk4363d5pnm7gp"; depends=[Biobase BiocGenerics gdsfmt GenomicRanges graph GWASTools IRanges S4Vectors SeqArray SeqVarTools]; }; + GENIE3 = derive2 { name="GENIE3"; version="1.0.0"; sha256="1lxbkhlvb082nrmlq2b57chi0vpyaqwj56ngbzli8qdmp1gz4qd3"; depends=[reshape2]; }; + GEOmetadb = derive2 { name="GEOmetadb"; version="1.40.0"; sha256="003inwm8qkjdaihlx4009nwj3rgjn3xdk0m8k696qhniq99gcd0a"; depends=[GEOquery RSQLite]; }; + GEOquery = derive2 { name="GEOquery"; version="2.46.14"; sha256="12m6l95qjip33rw97qymc2i0wpmdmsvswlcp93b3gssxslpzkqzi"; depends=[Biobase dplyr httr limma magrittr readr tidyr xml2]; }; + GEOsearch = derive2 { name="GEOsearch"; version="1.1.4"; sha256="0k0vn99rz2821gswb834nn9ib099a152y2828ka7qvhag4shzdy9"; depends=[org_Hs_eg_db org_Mm_eg_db RCurl]; }; + GEOsubmission = derive2 { name="GEOsubmission"; version="1.30.0"; sha256="0sl9m7lk7jczpcfhn50yn322v1s65d9swjidcnzk3ydv47z419p8"; depends=[affy Biobase]; }; + GEWIST = derive2 { name="GEWIST"; version="1.22.0"; sha256="0lfm19s4z5j7zhpzhfa7rqdz09ip05cf2zbnsqv9widdmkcw2wnk"; depends=[car]; }; + GGBase = derive2 { name="GGBase"; version="3.40.0"; sha256="0iavmbfvx5in8pq4c7bx63anlj4l1ra5qmr3pgx7x3cp43d6qsza"; depends=[AnnotationDbi Biobase BiocGenerics digest genefilter GenomicRanges IRanges limma Matrix S4Vectors snpStats SummarizedExperiment]; }; + GGtools = derive2 { name="GGtools"; version="5.14.0"; sha256="0h1lcz363z7gcy3i3ap0vrdrq71wlzr3y0f9866zmn67hlrfbp7i"; depends=[AnnotationDbi biglm Biobase BiocGenerics Biostrings bit data_table ff GenomeInfoDb GenomicRanges GGBase ggplot2 Gviz hexbin Homo_sapiens IRanges iterators reshape2 ROCR Rsamtools rtracklayer S4Vectors snpStats VariantAnnotation]; }; + GISPA = derive2 { name="GISPA"; version="1.2.0"; sha256="1kyghhfv0jabc823kxcab267snjnxba7d3swnfssshrxirwbgy3b"; depends=[Biobase changepoint data_table genefilter GSEABase HH lattice latticeExtra plyr scatterplot3d]; }; + GLAD = derive2 { name="GLAD"; version="2.42.0"; sha256="1ay8wrhgwv6jyc54pv8xywdhm3v48qavdm6rq7l0n7fy4kydxz75"; depends=[]; }; + GMRP = derive2 { name="GMRP"; version="1.5.0"; sha256="124jzpd0y8c1fdp6ndh75q0nqbcwjkmmm3w6ih2qinanbc2b5bmp"; depends=[diagram GenomicRanges plotrix]; }; + GOFunction = derive2 { name="GOFunction"; version="1.26.0"; sha256="0ykagd4klrsjbf5iqn87anlplvnvvd3fhklpn1fm4fkx1lvg6jvx"; depends=[AnnotationDbi Biobase DBI GO_db graph Rgraphviz SparseM]; }; + GOSemSim = derive2 { name="GOSemSim"; version="2.4.1"; sha256="0if17mizlf1v85nzbzkc3nl8052cmf7a3a04zrphc0rv8ndyl1s7"; depends=[AnnotationDbi GO_db Rcpp]; }; + GOSim = derive2 { name="GOSim"; version="1.16.0"; sha256="1gy95bywv33if5fkhaihx8h64mcvzn7hrid91zib9asfpllbq3j7"; depends=[annotate AnnotationDbi cluster corpcor flexmix GO_db graph Matrix org_Hs_eg_db RBGL Rcpp topGO]; }; + GOTHiC = derive2 { name="GOTHiC"; version="1.14.0"; sha256="0qn9nlr1yfd91p5wriwnvqmwndfzpy0c18zbnqkv7i2s66mcwkja"; depends=[BiocGenerics Biostrings BSgenome data_table GenomicRanges ggplot2 IRanges Rsamtools rtracklayer S4Vectors ShortRead]; }; + GOexpress = derive2 { name="GOexpress"; version="1.12.0"; sha256="0yfqw3v1ywwpkvnsjz20mkg9ay35hfs4ldab6gza197jbg61qq88"; depends=[Biobase biomaRt ggplot2 gplots randomForest RColorBrewer RCurl stringr]; }; + GOpro = derive2 { name="GOpro"; version="1.4.2"; sha256="1djrws9n6znzhzs8lbpclcx227d5fv23mmw181pcnmp9kgf0f4w4"; depends=[AnnotationDbi BH dendextend doParallel foreach GO_db IRanges MultiAssayExperiment org_Hs_eg_db Rcpp S4Vectors]; }; + GOstats = derive2 { name="GOstats"; version="2.44.0"; sha256="04gqfdlx9fxf97qf0l28x4aaqvl10n6v58qiz5fiaw05sbj1pf1i"; depends=[annotate AnnotationDbi AnnotationForge Biobase Category GO_db graph RBGL Rgraphviz]; }; + GOsummaries = derive2 { name="GOsummaries"; version="2.12.0"; sha256="1aqzr7llwcq2w5vn7q3yny7x6kllr62cm43qs3d2qm4iyvfb2a4s"; depends=[ggplot2 gProfileR gtable limma plyr Rcpp reshape2]; }; + GRENITS = derive2 { name="GRENITS"; version="1.30.0"; sha256="0bi7vxq3wh9vy4hibpbpk5vzf0skqxs1jg3macscbvwm7ggqs801"; depends=[ggplot2 Rcpp RcppArmadillo reshape2]; }; + GRmetrics = derive2 { name="GRmetrics"; version="1.4.1"; sha256="11ifwb1avizipg2v5safs0i7yr1rrydyg41y76ccc45ygjdy303g"; depends=[drc ggplot2 plotly S4Vectors SummarizedExperiment]; }; + GRridge = derive2 { name="GRridge"; version="1.2.0"; sha256="1s29c9jsh34qswib39v0xp9ir005d9pa5lv92ka3s8a4y5hxfi7a"; depends=[annotate Biobase BiocGenerics graph GSEABase Iso penalized survival]; }; + GSALightning = derive2 { name="GSALightning"; version="1.6.0"; sha256="1n9dc5ahfslh9yvz81ppgjlnpmcm1c84rsmpgzy2hrzkrrnqxlsx"; depends=[data_table Matrix]; }; + GSAR = derive2 { name="GSAR"; version="1.12.0"; sha256="0v6sy4mi3zvgnk0f9diy4zz8vl5n5pdm3yyb6hm6bqy56wx0bl7r"; depends=[igraph]; }; + GSCA = derive2 { name="GSCA"; version="2.8.0"; sha256="1r9kdvrj1f91cdl8zwkhpskdg7m10qpz1xy0a3r67xfs2ciyagyi"; depends=[ggplot2 gplots RColorBrewer reshape2 rhdf5 shiny sp]; }; + GSEABase = derive2 { name="GSEABase"; version="1.40.1"; sha256="10cmjxahg2plwacfan6g0k8cwyzya96ypc7m1r79gwqkyykxw5fz"; depends=[annotate AnnotationDbi Biobase BiocGenerics graph XML]; }; + GSEAlm = derive2 { name="GSEAlm"; version="1.38.0"; sha256="1kz27bbccgi34z1i1wlsk8ikqbv2mi8f8i9is0irhl9zgvbrczxz"; depends=[Biobase]; }; + GSRI = derive2 { name="GSRI"; version="2.26.0"; sha256="12silcf67r3ni40g7vsc7iv15arzy7w12abpj2xcjfd9nr4d84js"; depends=[Biobase fdrtool genefilter GSEABase les]; }; + GSReg = derive2 { name="GSReg"; version="1.12.0"; sha256="1rdzkv6kf14shfddvrz3pssjgr6pvg6is4lzcvjzrxai4y34n0y6"; depends=[AnnotationDbi GenomicFeatures Homo_sapiens org_Hs_eg_db]; }; + GSVA = derive2 { name="GSVA"; version="1.26.0"; sha256="1zvi0w7clm5qg6fv6akqw4cx84kswcgzfzjdkhxsrid0l4hwmw09"; depends=[Biobase BiocGenerics geneplotter GSEABase shiny shinythemes]; }; + GUIDEseq = derive2 { name="GUIDEseq"; version="1.8.0"; sha256="1xsjz3mq6iawspdz1rif3fb8j2h92ykfrjj3lzlcsnvg92bnlczq"; depends=[BiocGenerics BiocParallel Biostrings BSgenome ChIPpeakAnno CRISPRseek data_table GenomeInfoDb GenomicAlignments GenomicRanges hash IRanges limma matrixStats Rsamtools S4Vectors]; }; + GWASTools = derive2 { name="GWASTools"; version="1.24.1"; sha256="1x8p32f47fki2kl0pkjv4v7az8s1b6zwqjnxywfxy0drs9g6lky4"; depends=[Biobase DBI DNAcopy gdsfmt GWASExactHW lmtest logistf quantsmooth RSQLite sandwich survival]; }; + GenRank = derive2 { name="GenRank"; version="1.6.0"; sha256="071k23qknpd46x22bj2cmp07mmxj22higw8ma4b0a8w0wmd05bwz"; depends=[matrixStats reshape2 survcomp]; }; + GenVisR = derive2 { name="GenVisR"; version="1.8.0"; sha256="03jc5qz1xfqpbll8qbs5ib7g70s21crmggc9a6xi9nvjq8ky05r6"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings DBI FField GenomicFeatures GenomicRanges ggplot2 gridExtra gtable gtools IRanges plyr reshape2 Rsamtools scales viridis]; }; + GeneAnswers = derive2 { name="GeneAnswers"; version="2.20.0"; sha256="11bdc59ybi1kck3jkzilf0vmql6a3k97b1f9h940h28mhgn5x9w6"; depends=[annotate Biobase downloader Heatplus igraph MASS RBGL RColorBrewer RCurl RSQLite XML]; }; + GeneBreak = derive2 { name="GeneBreak"; version="1.8.0"; sha256="1157crj12c3girr6973a24ph15rfjw0vcakr42fpx7yhhirs89lb"; depends=[CGHbase CGHcall GenomicRanges QDNAseq]; }; + GeneExpressionSignature = derive2 { name="GeneExpressionSignature"; version="1.24.0"; sha256="1l8829axy6fp29bkqlwbjcsajq99yb86yp5cc8211zprlhlxb30i"; depends=[Biobase PGSEA]; }; + GeneGA = derive2 { name="GeneGA"; version="1.28.0"; sha256="172hwxp91zj4pvamarnkx9cf1jm3zplws7scb4q00n1nxirhfzfd"; depends=[hash seqinr]; }; + GeneGeneInteR = derive2 { name="GeneGeneInteR"; version="1.4.0"; sha256="14jnlc1icg7ws6gvffx3jpmhzcfaznzw6p8i0l1wpx22jyy3qam5"; depends=[data_table FactoMineR GenomicRanges GGtools igraph IRanges kernlab mvtnorm plspm rioja Rsamtools snpStats]; }; + GeneMeta = derive2 { name="GeneMeta"; version="1.50.0"; sha256="1cf8z6wy9yhs1y7f8fimjkx52brgr9fkhjaa9a62d2rvan65g9s2"; depends=[Biobase genefilter]; }; + GeneNetworkBuilder = derive2 { name="GeneNetworkBuilder"; version="1.20.0"; sha256="17r2106r9fkpsj592dq6k70n8jj6gv65hrmblnsssck6h0n6n3ix"; depends=[graph htmlwidgets plyr Rcpp Rgraphviz rjson XML]; }; + GeneOverlap = derive2 { name="GeneOverlap"; version="1.14.0"; sha256="02svcyk1pa470033q2iv8148ypf6gbisxl8f09ksblvrrd0flh38"; depends=[gplots RColorBrewer]; }; + GeneRegionScan = derive2 { name="GeneRegionScan"; version="1.34.0"; sha256="0ycxk1njlrshk6wr466r8jdj3pfl125ilifgrvcbgr526ndalmpp"; depends=[affxparser Biobase Biostrings RColorBrewer S4Vectors]; }; + GeneSelectMMD = derive2 { name="GeneSelectMMD"; version="2.22.0"; sha256="1v2ry9k8kqr95nx1z347f8hqdbawqb8f5p7iq7jb2w1smvhb26fr"; depends=[Biobase limma MASS survival]; }; + GeneSelector = derive2 { name="GeneSelector"; version="2.28.0"; sha256="0fc12sngwsw3sggmi08lb8r8lvb3hp77jqv3k1501nba4gq2wa9s"; depends=[Biobase limma multtest samr siggenes]; }; + GeneticsDesign = derive2 { name="GeneticsDesign"; version="1.46.0"; sha256="174swyvx1j9px2shn1188zgilyiclxclr317gsv5ab7f671lzl8n"; depends=[gmodels gtools mvtnorm]; }; + GeneticsPed = derive2 { name="GeneticsPed"; version="1.40.0"; sha256="0q2jrpi6ha4hsxsmprwsrls2ybs0clms6vh7smwa9j9g5lz7i93y"; depends=[gdata genetics MASS]; }; + GenoGAM = derive2 { name="GenoGAM"; version="1.6.0"; sha256="1dvaapinarpgn3i63iqhdbjh9mc5h7sgdxwlv9d55l42d1jyj6h3"; depends=[BiocParallel Biostrings data_table DESeq2 futile_logger GenomeInfoDb GenomicAlignments GenomicRanges IRanges mgcv reshape2 Rsamtools S4Vectors SummarizedExperiment]; }; + GenomeGraphs = derive2 { name="GenomeGraphs"; version="1.38.0"; sha256="15p75cbbgwgcc3awyvawkah491yim0rp73af815pfiai11a51i4m"; depends=[biomaRt]; }; + GenomeInfoDb = derive2 { name="GenomeInfoDb"; version="1.14.0"; sha256="1jhm0imkac4gvchbjxj408aakk39xdv2fyh818d3lk295bz6bnyp"; depends=[BiocGenerics GenomeInfoDbData IRanges RCurl S4Vectors]; }; + GenomicAlignments = derive2 { name="GenomicAlignments"; version="1.14.1"; sha256="033p6fw46sn7w2yyn14nb9qcnkf30cl0nv6zh014ixflm3iifz39"; depends=[BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors SummarizedExperiment]; }; + GenomicDataCommons = derive2 { name="GenomicDataCommons"; version="1.2.0"; sha256="0ndzpzripibx38nk40xpz4xkghhr4an3skqdhfh8479jk2fnfwjd"; depends=[data_table GenomicRanges httr IRanges jsonlite lazyeval magrittr readr xml2]; }; + GenomicFeatures = derive2 { name="GenomicFeatures"; version="1.30.3"; sha256="010vn8hlwbnw12pd1d8pv6m12yp3xwx557gba5rbjq9p4qypnn3z"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings DBI GenomeInfoDb GenomicRanges IRanges RCurl RMySQL RSQLite rtracklayer S4Vectors XVector]; }; + GenomicFiles = derive2 { name="GenomicFiles"; version="1.14.0"; sha256="0r0wmrs5jycf1kckhnc2sgjmp336srlcjdkpbb1ymm7kazdd0s9n"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; + GenomicInteractions = derive2 { name="GenomicInteractions"; version="1.12.0"; sha256="0f0ki2zsaxg6f4qr47xgyhxm6jvms0s1zab7f0vcnw8jd7vhmnzn"; depends=[Biobase BiocGenerics data_table dplyr GenomeInfoDb GenomicRanges ggplot2 gridExtra Gviz igraph InteractionSet IRanges Rsamtools rtracklayer S4Vectors stringr]; }; + GenomicRanges = derive2 { name="GenomicRanges"; version="1.30.2"; sha256="0c3r155603vb4zjs3adqa72770bh8karc11y8gl62l1m24jrkbnj"; depends=[BiocGenerics GenomeInfoDb IRanges S4Vectors XVector]; }; + GenomicScores = derive2 { name="GenomicScores"; version="1.2.2"; sha256="0g6i90vn29pasiqbq0088bgdisr356539z94scv7cila968inh7n"; depends=[AnnotationHub Biobase BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors XML]; }; + GenomicTuples = derive2 { name="GenomicTuples"; version="1.12.0"; sha256="0962l9204vm5x7vcqzlvlgblhdczwp4zbq4i262gqh79lnx4yq1y"; depends=[BiocGenerics data_table GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; }; + Genominator = derive2 { name="Genominator"; version="1.32.0"; sha256="1gh56xyfgx5f8rb0wbpvkg8h2q1ci2qf3ngkg3sficn65pbj9iha"; depends=[BiocGenerics DBI GenomeGraphs IRanges RSQLite]; }; + Glimma = derive2 { name="Glimma"; version="1.6.0"; sha256="19640crf4pivalivakk22llr9z505d5iq09fnlj4cj6fnga7abzq"; depends=[Biobase edgeR jsonlite S4Vectors]; }; + GlobalAncova = derive2 { name="GlobalAncova"; version="3.46.0"; sha256="16bhrkrz24hwxv0py4xiv043z1gxlak3qvdrdmc8pw7swv52hv9w"; depends=[annotate AnnotationDbi corpcor globaltest]; }; + GoogleGenomics = derive2 { name="GoogleGenomics"; version="2.0.0"; sha256="1z3p1xyj45hapvy765akxf88ll9fzsjnprc1g8cv9a9fdjg7vw36"; depends=[Biobase Biostrings GenomeInfoDb GenomicAlignments GenomicRanges httr IRanges rjson Rsamtools S4Vectors VariantAnnotation]; }; + GraphAT = derive2 { name="GraphAT"; version="1.50.0"; sha256="0hrcz1d4k0g1k8izzk9znwxgr3f6ilv93vswqv3z3sfk5ib3aznr"; depends=[graph MCMCpack]; }; + GraphAlignment = derive2 { name="GraphAlignment"; version="1.42.0"; sha256="1vq6g4w75wlnq201mc93xmbp80dj9rc3ay7zqcpwr4bjnpmgh53v"; depends=[]; }; + GraphPAC = derive2 { name="GraphPAC"; version="1.20.0"; sha256="0g0r6714d0bamq5gwggqkbh9ac23wqjdlp358br7z4gkgixxz8zd"; depends=[igraph iPAC RMallow TSP]; }; + GreyListChIP = derive2 { name="GreyListChIP"; version="1.10.0"; sha256="17bn80x35nw0ys4n67m8sq3zij5ikasi4fqchx98pn72czl932r4"; depends=[BSgenome GenomeInfoDb GenomicAlignments GenomicRanges MASS Rsamtools rtracklayer SummarizedExperiment]; }; + Guitar = derive2 { name="Guitar"; version="1.16.0"; sha256="03pivwaw41ycpg4iwppg9dn7ina8g98kixwpxhv9nnvkzf3124xp"; depends=[GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges Rsamtools rtracklayer]; }; + Gviz = derive2 { name="Gviz"; version="1.22.3"; sha256="1grjzrjpzkw572pbvpsvdnfkfgwybl0cnjd7nnk2xdr26wnbsi9a"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings biovizBase BSgenome digest GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges lattice latticeExtra matrixStats RColorBrewer Rsamtools rtracklayer S4Vectors XVector]; }; + HCsnip = derive2 { name="HCsnip"; version="1.17.0"; sha256="109svm1nzvf0a6hi9fvg7pzfpdbh44dlp6v0dphqm246gqh2cq22"; depends=[Biobase clusterRepro coin fpc impute randomForestSRC sigaR sm survival]; }; + HDF5Array = derive2 { name="HDF5Array"; version="1.6.0"; sha256="0kcdza41saqv6vlpvqd841awbiwkg84lh0plx6c7fmfgbqv7a0jh"; depends=[BiocGenerics DelayedArray IRanges rhdf5 S4Vectors]; }; + HDTD = derive2 { name="HDTD"; version="1.12.0"; sha256="0dd1z93pv141q51nvjh6dfgvxw6h9wwdllbvy7s4z5vd43w576s8"; depends=[]; }; + HELP = derive2 { name="HELP"; version="1.36.0"; sha256="0216pwpfi626g49hgz8g2gniixakcdx5yhrw03dy0pn0xp26wnhc"; depends=[Biobase]; }; + HEM = derive2 { name="HEM"; version="1.50.0"; sha256="10p66m46zqm7dj6ldx8dqrwymaplzrpvbg6yqzyx7llvzar7dil7"; depends=[Biobase]; }; + HIBAG = derive2 { name="HIBAG"; version="1.14.0"; sha256="0kk4bf6q6kk8vm18vy56p075538awfbv310c4241m5j3i7g4pxxl"; depends=[]; }; + HMMcopy = derive2 { name="HMMcopy"; version="1.20.0"; sha256="0jhfgshaj5917b24siiik72qaa19w05v5jqa6zj5vi8j02lv7i9g"; depends=[geneplotter IRanges]; }; + HTSFilter = derive2 { name="HTSFilter"; version="1.18.0"; sha256="1q1782cky7kh042wfr5h588019jwzm9sw4c9f503hq2gfgb6n3xi"; depends=[Biobase BiocParallel DESeq DESeq2 edgeR]; }; + HTSanalyzeR = derive2 { name="HTSanalyzeR"; version="2.30.0"; sha256="1h75igpbws4hdd2nrnbf8w0rpyfjmbb57m3ja5fir0l4x7lwn1rw"; depends=[AnnotationDbi biomaRt BioNet cellHTS2 graph GSEABase igraph RankProd]; }; + HTSeqGenie = derive2 { name="HTSeqGenie"; version="4.8.0"; sha256="0b7j6fbww9336ph4xmw8gvln5b6iy3fmcsx5ggxjln8vdy8ca4yi"; depends=[BiocGenerics BiocParallel Biostrings Cairo chipseq GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gmapR hwriter IRanges Rsamtools rtracklayer S4Vectors ShortRead SummarizedExperiment VariantAnnotation VariantTools]; }; + HTqPCR = derive2 { name="HTqPCR"; version="1.32.0"; sha256="0bzygl0mk35y6zwixsqxv4k3hdwjj77hia97bdj4bngm1x5qllai"; depends=[affy Biobase gplots limma RColorBrewer]; }; + Harman = derive2 { name="Harman"; version="1.6.0"; sha256="17s3kxldvfnk5j20n0csbx967xa4npb5x0wy7whhb6zdk9dw7g6q"; depends=[Rcpp]; }; + Harshlight = derive2 { name="Harshlight"; version="1.50.0"; sha256="0jcl49dgb6h3s0yh0ym7sfmsfyc2f3ykvnizp66i18by7fa5va60"; depends=[affy altcdfenvs Biobase]; }; + Heatplus = derive2 { name="Heatplus"; version="2.24.0"; sha256="0lil1yfqqga9l6qrgismngvary4495zmi4yk01izpcx29pk8zn6n"; depends=[RColorBrewer]; }; + HelloRanges = derive2 { name="HelloRanges"; version="1.4.0"; sha256="0pbikr79lh6iij044sy6fw6i2bqigmna4hb806kyihclpm0rs3y2"; depends=[BiocGenerics Biostrings BSgenome docopt GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; + HiCcompare = derive2 { name="HiCcompare"; version="1.0.0"; sha256="1r25l4q7rpzjhz02ys78a4p8ga3wrd231znk84pp7xgka3xpprv0"; depends=[BiocParallel data_table dplyr GenomicRanges ggplot2 gridExtra gtools InteractionSet IRanges KernSmooth mgcv pheatmap QDNAseq S4Vectors]; }; + HiTC = derive2 { name="HiTC"; version="1.22.0"; sha256="0288xa1jy6nzvz2ha07csmp6dirjw5r7p9vy69q2wsbyzr02ymkp"; depends=[Biostrings GenomeInfoDb GenomicRanges IRanges Matrix RColorBrewer rtracklayer]; }; + HilbertCurve = derive2 { name="HilbertCurve"; version="1.9.1"; sha256="1k3l3i8fpfhzsdwrlkyp7k8rpkyg51lx6c776vd8nm4f2nqn7z36"; depends=[circlize GenomicRanges HilbertVis IRanges png]; }; + HilbertVis = derive2 { name="HilbertVis"; version="1.36.0"; sha256="1yilvi5pcr0z5h0n0mf7hfrjc7cl44vn6svczlmw57n8pxf8p35g"; depends=[lattice]; }; + HilbertVisGUI = derive2 { name="HilbertVisGUI"; version="1.36.0"; sha256="12bwk0lj2s6jgrpwigc4jd80irzxqjwc8smq1dhsm6pj62v0gvlk"; depends=[HilbertVis]; }; + HybridMTest = derive2 { name="HybridMTest"; version="1.22.0"; sha256="0lrfqalazszcywv58q1grmxp3dn6yxgi3xmwi53cq5bacizqdq3j"; depends=[Biobase fdrtool MASS survival]; }; + IHW = derive2 { name="IHW"; version="1.6.0"; sha256="14vbi9p3bi09qc0vjnwksfgv5c95ka468c1w5qjj6v99cyj548id"; depends=[BiocGenerics fdrtool lpsymphony slam]; }; + IMAS = derive2 { name="IMAS"; version="1.2.0"; sha256="0568llff8d11fykanhy3ja1wbi7hidwixyql8zbi04nfxskpsa6k"; depends=[AnnotationDbi BiocGenerics BiocParallel doParallel foreach GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggfortify ggplot2 gridExtra IRanges IVAS lattice lme4 Matrix Rsamtools S4Vectors survival]; }; + IMPCdata = derive2 { name="IMPCdata"; version="1.14.0"; sha256="1aaj9fvp6f8zqwadkms23lghf65rghb729m84rdv4c7q4flb96sy"; depends=[rjson]; }; + INPower = derive2 { name="INPower"; version="1.14.0"; sha256="17d53fa96pqh7xhvhmydrvy00x3dvba6npapc5hngzzlr7pc07bv"; depends=[mvtnorm]; }; + INSPEcT = derive2 { name="INSPEcT"; version="1.8.0"; sha256="1v3zyiqc0b5rhbkx7w7r2a7m88jgafp84vsgrs9wi8fhs8mvyvd1"; depends=[Biobase BiocGenerics BiocParallel deSolve GenomicAlignments GenomicFeatures GenomicRanges IRanges preprocessCore pROC rootSolve Rsamtools S4Vectors]; }; + IONiseR = derive2 { name="IONiseR"; version="2.2.0"; sha256="1qrdgm94xpm075nlgv9zklm7pwfbfjj2d45lv0gs11qj4xi8rccx"; depends=[BiocGenerics BiocParallel Biostrings bit64 dplyr ggplot2 magrittr rhdf5 ShortRead stringr tibble tidyr XVector]; }; + IPO = derive2 { name="IPO"; version="1.4.1"; sha256="0bskznr2w1pfanxfnffg1gdjvwii3wkpsgmz96pjxa23yw1ykpgp"; depends=[BiocParallel CAMERA rsm xcms]; }; + IPPD = derive2 { name="IPPD"; version="1.26.0"; sha256="0s2xl5k9sr8kqqn9hbi0kbqmn4xm78fnsqg7g82w69ah3v7myl1f"; depends=[bitops digest MASS Matrix XML]; }; + IRanges = derive2 { name="IRanges"; version="2.12.0"; sha256="1vqczb9wlxsmpwpqig6j1dmiblcfpq6mgnq8qwzcrvddm4cp47m5"; depends=[BiocGenerics S4Vectors]; }; + ISoLDE = derive2 { name="ISoLDE"; version="1.6.0"; sha256="02xl3a9pdwdyjm0iyza43b26bvvpxz13z30kbwv4g3h7w5q3szvr"; depends=[]; }; + ITALICS = derive2 { name="ITALICS"; version="2.38.0"; sha256="047s6q6l2zv3d01hw0qxxshq69cvz8d6cq631n5r6i4bp2pnay32"; depends=[affxparser DBI GLAD ITALICSData oligo oligoClasses pd_mapping50k_xba240]; }; + IVAS = derive2 { name="IVAS"; version="1.98.0"; sha256="1ngijwnx07i7i0pj72dz6c6kims0n5cjcs75yaw5dfwl00xn9p2a"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges ggfortify ggplot2 IRanges lme4 Matrix S4Vectors]; }; + IWTomics = derive2 { name="IWTomics"; version="1.2.0"; sha256="1ndpyikxf4z4p7xmmpbd4h7mv9pcdjds0ziwvzi55r486065i2z1"; depends=[fda GenomicRanges gtable IRanges KernSmooth S4Vectors]; }; + Icens = derive2 { name="Icens"; version="1.50.0"; sha256="19aidmg2f7ij1zak8cxy4y8y1dbhgb17y87zkw8829zh2diz04hm"; depends=[survival]; }; + IdMappingAnalysis = derive2 { name="IdMappingAnalysis"; version="1.22.0"; sha256="0dxrylxdyi22x7bsdv70rkwi3j6q0gyddhx48d9f84dsi51zimz4"; depends=[Biobase boot mclust R_oo rChoiceDialogs RColorBrewer]; }; + IdMappingRetrieval = derive2 { name="IdMappingRetrieval"; version="1.26.0"; sha256="19y4xjj5fakyf7mdc33r9lygayq4clgm03410iw3si5vy2ib720l"; depends=[AffyCompatible biomaRt ENVISIONQuery R_methodsS3 R_oo rChoiceDialogs RCurl XML]; }; + IdeoViz = derive2 { name="IdeoViz"; version="1.12.0"; sha256="1ihfxp4dngwk72nxw36w15d28cpz4y0qxagap4km76i51c9jm855"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges RColorBrewer rtracklayer]; }; + Imetagene = derive2 { name="Imetagene"; version="1.8.0"; sha256="1xgdwp5xvl57xll1i691c0fqnj5rp53l86my3wvbxwd9jdj6rz6v"; depends=[d3heatmap ggplot2 metagene shiny shinyBS shinyFiles shinythemes]; }; + ImmuneSpaceR = derive2 { name="ImmuneSpaceR"; version="1.6.2"; sha256="14ad6ar2pprisahv433w20whpnrssr0hfsm59d6m3bkwaff4hb8h"; depends=[Biobase data_table ggplot2 gplots gtools heatmaply httr pheatmap plotly preprocessCore reshape2 rjson Rlabkey rmarkdown scales]; }; + ImpulseDE = derive2 { name="ImpulseDE"; version="1.4.0"; sha256="04l1rkpmk682af5yw9whj8ngq788kmzf7p76paayb6ihamhkcfq1"; depends=[amap boot]; }; + ImpulseDE2 = derive2 { name="ImpulseDE2"; version="1.2.0"; sha256="11gr6ycg46ywkrwrnarn5a582nq8x47mhlg140d7fw2wiy20b8ln"; depends=[Biobase BiocParallel circlize ComplexHeatmap cowplot DESeq2 ggplot2 knitr Matrix S4Vectors SummarizedExperiment]; }; + InPAS = derive2 { name="InPAS"; version="1.10.0"; sha256="1svpjpkqv8va2mrf3b366rqbiwy73jf5rxc32md4arjprs1kb13v"; depends=[AnnotationDbi Biobase BiocParallel BSgenome cleanUpdTSeq depmixS4 GenomeInfoDb GenomicFeatures GenomicRanges Gviz IRanges limma preprocessCore S4Vectors seqinr]; }; + IntEREst = derive2 { name="IntEREst"; version="1.2.2"; sha256="1ck2kmb25wf6rw97mag8l99g05mwaxs2lhpv1722inqq24q0smmq"; depends=[BiocGenerics BiocParallel Biostrings DBI DESeq2 DEXSeq edgeR GenomicAlignments GenomicFeatures GenomicRanges IRanges RMySQL Rsamtools S4Vectors seqinr seqLogo SummarizedExperiment]; }; + InterMineR = derive2 { name="InterMineR"; version="1.0.0"; sha256="0gb493spb89c4qz1s9ng9g8w136zcqdnq0rlpqqw3bxdpqck83fb"; depends=[Biostrings GenomicRanges httr igraph IRanges RCurl RJSONIO S4Vectors sqldf SummarizedExperiment XML xml2]; }; + InteractionSet = derive2 { name="InteractionSet"; version="1.6.0"; sha256="1wmp4dqxj19dbd97r6zfzv81j06vh9j7bpypcxib8f2lyx26cwm9"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges Matrix Rcpp S4Vectors SummarizedExperiment]; }; + IntramiRExploreR = derive2 { name="IntramiRExploreR"; version="1.0.0"; sha256="096503aaiznkcpxksxjq95lfb6pcbdvimns8ahc56vr6m5nqnpfx"; depends=[FGNet igraph knitr]; }; + IrisSpatialFeatures = derive2 { name="IrisSpatialFeatures"; version="1.2.0"; sha256="0glx0p5qjfs2fk48qcdi7w14iyj0chk1plv5r69c8iyyc4frd7xk"; depends=[data_table dplyr ggplot2 gplots magrittr RColorBrewer Rcpp SpatialTools spatstat tibble tiff]; }; + IsoGeneGUI = derive2 { name="IsoGeneGUI"; version="2.14.0"; sha256="085clvn2wgqicvmd2c0h9ah59l6bwy0l6y8lq69ajy7il1grm4qq"; depends=[Biobase ff geneplotter goric Iso IsoGene jpeg multtest ORCME ORIClust orQA RColorBrewer Rcpp relimp tkrplot xlsx]; }; + IsoformSwitchAnalyzeR = derive2 { name="IsoformSwitchAnalyzeR"; version="1.0.0"; sha256="0bb3y3r26kwgx84lhr52fyrk9i2jjwhnarr3wdxpyj4j00w2dq1f"; depends=[Biostrings BSgenome cummeRbund DBI DRIMSeq edgeR GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges plyr RColorBrewer reshape2 rtracklayer spliceR tximport VennDiagram]; }; + JASPAR2018 = derive2 { name="JASPAR2018"; version="1.0.0"; sha256="0kx6bfcmp9a0rka0pgpl7lsaw79imcd6zrpgzqg5l1031vlyplc4"; depends=[]; }; + JunctionSeq = derive2 { name="JunctionSeq"; version="1.8.0"; sha256="01db6xpmci0kldwi2x8xfmsbi4iywghcz8spd5601dd03cnmxxrk"; depends=[Biobase BiocGenerics BiocParallel DESeq2 genefilter geneplotter GenomicRanges Hmisc IRanges locfit plotrix Rcpp RcppArmadillo S4Vectors statmod stringr SummarizedExperiment]; }; + KCsmart = derive2 { name="KCsmart"; version="2.36.0"; sha256="0a1flc9bm4w0rfy3jf8fim7c0ddy9zjln0kgyyi3ps7n4rk4n75q"; depends=[BiocGenerics KernSmooth multtest siggenes]; }; + KEGGREST = derive2 { name="KEGGREST"; version="1.18.1"; sha256="02gwmm79djj55a90dzc80hlgwc6bafl7xd7fnx2q59pk945k3z9c"; depends=[Biostrings httr png]; }; + KEGGgraph = derive2 { name="KEGGgraph"; version="1.38.0"; sha256="028icymxshg4v80b5xhvpdqm87qxi9s6yycp2z5w55mhw8l22azw"; depends=[graph XML]; }; + KEGGlincs = derive2 { name="KEGGlincs"; version="1.4.0"; sha256="17l8hd072052hd8wfnxj06455qdgdx2bk456rl8ga6bjqbn0r4nq"; depends=[AnnotationDbi gtools hgu133a_db httr igraph KEGGgraph KEGGREST KOdata org_Hs_eg_db plyr RJSONIO XML]; }; + KEGGprofile = derive2 { name="KEGGprofile"; version="1.20.0"; sha256="0kd5wpnqpp9r1fy12islaj09qfnvkdf705rmapbzly47abqsziad"; depends=[AnnotationDbi biomaRt KEGG_db KEGGREST png RCurl TeachingDemos XML]; }; + LBE = derive2 { name="LBE"; version="1.46.0"; sha256="0706nydzjl61ycnvck4xmpfk5x3pa2kllfivyxcjajhwlb4zr6r0"; depends=[]; }; + LEA = derive2 { name="LEA"; version="2.0.0"; sha256="1h1x2z2mamlvb4cf7541b1f7jh25i4lfhjm0nl5sfr1la1dmgsdn"; depends=[]; }; + LINC = derive2 { name="LINC"; version="1.6.0"; sha256="0jlbrcpmsk360mrqdfknkbc6zl87f7fxssd9hf2dp8fqkl3g1sfd"; depends=[ape Biobase clusterProfiler DOSE ggplot2 ggtree gridExtra org_Hs_eg_db png Rcpp ReactomePA reshape2 sva]; }; + LMGene = derive2 { name="LMGene"; version="2.34.0"; sha256="1nvv7dmpxgkwg9js3dzy09863bmm5xm068dmr1sl9jbjmx4lwwn0"; depends=[affy Biobase multtest survival]; }; + LOBSTAHS = derive2 { name="LOBSTAHS"; version="1.4.0"; sha256="1svy7mav82rq60bw3akriinb9kfbj02ysl1kcnhvdqicdb3ms5x4"; depends=[CAMERA xcms]; }; + LOLA = derive2 { name="LOLA"; version="1.8.0"; sha256="0wkgibvrh8ddqqbms7id8yqi4ic0nf1ppdjxzg86xafglzz8m26d"; depends=[BiocGenerics data_table GenomicRanges IRanges reshape2 S4Vectors]; }; + LPE = derive2 { name="LPE"; version="1.52.0"; sha256="10fm0p1khfypgghn4zp9w6bxc78mwvs39vcvhvpyrppr5xfqbn4c"; depends=[]; }; + LPEadj = derive2 { name="LPEadj"; version="1.38.0"; sha256="10h0mja8zz5cys8aa07vsp58h178bs66izwh0i6jc5b44hcdxrd2"; depends=[LPE]; }; + LVSmiRNA = derive2 { name="LVSmiRNA"; version="1.28.0"; sha256="093ndks9sx81q0hw6y5nz3dfb9w1adi0g3h6jqk5bl7h41lnrldw"; depends=[affy Biobase BiocGenerics limma MASS quantreg SparseM vsn zlibbioc]; }; + LedPred = derive2 { name="LedPred"; version="1.12.0"; sha256="1lhl6gkya72d4h0v32y3jpaz69g0l7n3v8ahgsz6dil84m4ksc8w"; depends=[akima e1071 ggplot2 irr jsonlite plot3D plyr RCurl ROCR testthat]; }; + Linnorm = derive2 { name="Linnorm"; version="2.2.0"; sha256="0a1zly4shxmq51zjdrmr7hsvmyaqs1xnhrisq93z4djrxq0paj0v"; depends=[amap apcluster ellipse fastcluster fpc ggdendro ggplot2 gmodels igraph limma MASS mclust Rcpp RcppArmadillo Rtsne statmod vegan zoo]; }; + LiquidAssociation = derive2 { name="LiquidAssociation"; version="1.32.0"; sha256="0l175s1376wlkb0lva2xafq8p5n3011ldqm3dqcnhkb8mxfqkn4f"; depends=[Biobase geepack org_Sc_sgd_db yeastCC]; }; + Logolas = derive2 { name="Logolas"; version="1.2.0"; sha256="12syxp90dam9094xfgjvb820p14hgxx2xj08di9an12kb6h5s13b"; depends=[]; }; + LowMACA = derive2 { name="LowMACA"; version="1.10.0"; sha256="1qn60nrjr9aiw44wyp0q0qhsjm8hl3rzlc8wi6g9k3jaq2jq4v41"; depends=[BiocParallel Biostrings cgdsr data_table LowMACAAnnotation motifStack RColorBrewer reshape2 stringr]; }; + LymphoSeq = derive2 { name="LymphoSeq"; version="1.6.0"; sha256="1zh7wzw49nz3sf58m8rqi0dkgi9h9zff8jpdc4065pgjwg05r39s"; depends=[Biostrings circlize data_table dplyr ggplot2 ggtree ineq LymphoSeqDB msa phangorn plyr RColorBrewer reshape stringdist UpSetR VennDiagram]; }; + M3C = derive2 { name="M3C"; version="1.0.0"; sha256="0d25abzyq74g7faqyig4rpg963wbb39p9n420hdwrr7scbyij0v3"; depends=[cluster doParallel doSNOW foreach ggplot2 Matrix matrixcalc NMF RColorBrewer]; }; + M3D = derive2 { name="M3D"; version="1.12.0"; sha256="1w3bxwl19xrs3aigbzqa9n3v5yz6f7216ngyyilwhplnivq1k7zl"; depends=[BiocGenerics BiSeq GenomicRanges IRanges Rcpp S4Vectors SummarizedExperiment]; }; + M3Drop = derive2 { name="M3Drop"; version="1.4.0"; sha256="12s0nzih42gsr57532z0nmn6gccq40hfazsfqbl97w681ngfnk94"; depends=[bbmle gplots numDeriv RColorBrewer statmod]; }; + MADSEQ = derive2 { name="MADSEQ"; version="1.4.1"; sha256="0yc0ad7idb404ccw89w2lrqcfr9fdjlg876l8wsar6xgq7pa0lhd"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 coda GenomeInfoDb GenomicAlignments GenomicRanges IRanges preprocessCore rjags Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation VGAM zlibbioc]; }; + MAIT = derive2 { name="MAIT"; version="1.12.0"; sha256="1l90yy6m2x83bka9222wcyim005pvpimja7ipj9f1bizymd5ivls"; depends=[agricolae CAMERA caret class e1071 gplots MASS pls plsgenomics Rcpp xcms]; }; + MANOR = derive2 { name="MANOR"; version="1.50.0"; sha256="039msah06ga9vxk2i4qm7kv5lsxrmfr0ws9mdmh0bw6kv7l61wsr"; depends=[GLAD]; }; + MAST = derive2 { name="MAST"; version="1.4.1"; sha256="0waqz85gzyv09cjf4shz9dydazh0knczylh8854icn1i87x5sjsj"; depends=[abind Biobase BiocGenerics data_table ggplot2 plyr reshape2 S4Vectors stringr SummarizedExperiment]; }; + MBASED = derive2 { name="MBASED"; version="1.12.0"; sha256="1ys9m3g2c93wck6cj5n0vcdzca7f4qcxgc14zhabbs4pv70qc8mf"; depends=[BiocGenerics BiocParallel GenomicRanges RUnit SummarizedExperiment]; }; + MBAmethyl = derive2 { name="MBAmethyl"; version="1.12.0"; sha256="1h2hb4lbs1p101zd6k5xpp5ashib9iqrgkp2afdj0v4s8v9f2h09"; depends=[]; }; + MBCB = derive2 { name="MBCB"; version="1.32.0"; sha256="0amqmzi54dvkgzylavy0dbv973s2p02jppd5vzqzkrqs8amb3r4c"; depends=[preprocessCore tcltk2]; }; + MBttest = derive2 { name="MBttest"; version="1.5.0"; sha256="0gswdh61mmqn7h4d6vwvis08lxx383ynj6pk2va3z8bn25qki5lz"; depends=[gplots gtools]; }; + MCRestimate = derive2 { name="MCRestimate"; version="2.34.0"; sha256="1n4abpm6ld4ap87pgrv3mfr1aycdjb4hjg3fm699rckyl9qynjr3"; depends=[Biobase e1071 golubEsets pamr randomForest RColorBrewer]; }; + MCbiclust = derive2 { name="MCbiclust"; version="1.2.1"; sha256="1yqm6fwap4553nmh1dl3vg87hixljzm097wcv4l6sd5sd0sg63c7"; depends=[AnnotationDbi BiocParallel cluster GGally ggplot2 GO_db org_Hs_eg_db scales WGCNA]; }; + MEAL = derive2 { name="MEAL"; version="1.8.0"; sha256="0mccjr21jvmwlszhb9qixm7dr83gkhm2hjh9yrn11d22cm9r6g1q"; depends=[Biobase BiocGenerics DMRcate doParallel GenomicRanges ggplot2 Gviz IRanges isva limma matrixStats minfi missMethyl MultiDataSet permute S4Vectors SmartSVA SNPassoc snpStats SummarizedExperiment vegan]; }; + MEDIPS = derive2 { name="MEDIPS"; version="1.30.0"; sha256="06mm424g3rc8j64wfyv6w40m106wifzhi91nsbpi317fg98qfd3d"; depends=[biomaRt Biostrings BSgenome DNAcopy edgeR GenomicRanges gtools IRanges preprocessCore Rsamtools rtracklayer]; }; + MEDME = derive2 { name="MEDME"; version="1.38.0"; sha256="137p9z1g3z4r7q3nsrpsp2gbm657nrbrrq96ph1mykvv41ylq59p"; depends=[Biostrings drc MASS]; }; + MEIGOR = derive2 { name="MEIGOR"; version="1.12.0"; sha256="05ww7an7vk67rjcf31g9aq033w6yhx9dagrhj3ki5ks7hcwig1yv"; depends=[CNORode deSolve Rsolnp snowfall]; }; + MGFM = derive2 { name="MGFM"; version="1.12.0"; sha256="0yjr14anr5rny6g1508nrw905d4b01jh34vpwi8737p1q4d9bzis"; depends=[annotate AnnotationDbi]; }; + MGFR = derive2 { name="MGFR"; version="1.4.0"; sha256="04nxg65m1s8qyq8sbs8733d541r0vcmabz27w03vs87f0dbxhg11"; depends=[annotate biomaRt]; }; + MIGSA = derive2 { name="MIGSA"; version="1.2.0"; sha256="0ih5i1acb7igbcqk7wykxhncvl5vbgx34gl5nqc65adpqb0199fl"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel data_table edgeR futile_logger ggdendro ggplot2 GO_db GOstats graph GSEABase limma matrixStats mGSZ org_Hs_eg_db RBGL reshape2 Rgraphviz RJSONIO vegan]; }; + MIMOSA = derive2 { name="MIMOSA"; version="1.16.0"; sha256="0rnxr7gxcps2raxka8c2x58liwwc75acwpahi2xc1dl8c2z4jpvx"; depends=[Biobase coda data_table Formula ggplot2 MASS MCMCpack modeest plyr pracma Rcpp RcppArmadillo reshape scales testthat]; }; + MIRA = derive2 { name="MIRA"; version="1.0.1"; sha256="0dapp1q6vrdixz8n2g6ivav4d4si3wg1na7cg5jirb22mwi2rrpk"; depends=[Biobase BiocGenerics bsseq data_table GenomicRanges ggplot2 IRanges S4Vectors]; }; + MLInterfaces = derive2 { name="MLInterfaces"; version="1.58.0"; sha256="1py603bykvnzyq15rcqvq1nly3l6chh5zh6x4biwdn0smyjlnkns"; depends=[annotate Biobase BiocGenerics cluster fpc gbm gdata genefilter ggvis hwriter MASS mlbench pls RColorBrewer rda rpart sfsmisc shiny threejs]; }; + MLP = derive2 { name="MLP"; version="1.26.0"; sha256="0mhaw39rbzrnrminvsiq6vrdrmf3zm2zqg3ilnsq1zw8bm2bsbh7"; depends=[affy AnnotationDbi gdata gmodels gplots gtools plotrix]; }; + MLSeq = derive2 { name="MLSeq"; version="1.18.0"; sha256="1r6b33ic2lnj3v2qzs7r904rfyibz96yr35mgpiz4zzsax4ar6v4"; depends=[Biobase caret DESeq2 edgeR limma randomForest]; }; + MMDiff2 = derive2 { name="MMDiff2"; version="1.6.0"; sha256="13f96dw630hadqa0z83ispdni728g7zl12xj8zxrf5hvw1c1hs2h"; depends=[Biobase Biostrings BSgenome GenomicRanges ggplot2 locfit RColorBrewer Rsamtools S4Vectors shiny]; }; + MODA = derive2 { name="MODA"; version="1.4.0"; sha256="1baxma9g4ir24fxwxgm3hphvv8j521wgmvy86fcl2rai6ayy8liy"; depends=[AMOUNTAIN cluster dynamicTreeCut igraph RColorBrewer WGCNA]; }; + MPFE = derive2 { name="MPFE"; version="1.14.0"; sha256="0jh1s0skaw16d94149hisjnfn2hk6z7hdd4ishzwziqbwag60z0w"; depends=[]; }; + MSGFgui = derive2 { name="MSGFgui"; version="1.12.0"; sha256="1yr1m12svmcx7y1524j8dw91rf0gn28gs9hy7gan88lnjv4hlnh9"; depends=[MSGFplus mzID mzR shiny shinyFiles xlsx]; }; + MSGFplus = derive2 { name="MSGFplus"; version="1.12.0"; sha256="1xpzcmvlk394sqwl2lx8ihhgsnrfifpkrbh79b7lwwjzijr37npv"; depends=[mzID ProtGenerics]; }; + MSnID = derive2 { name="MSnID"; version="1.12.1"; sha256="1zw508kk4f8brg69674wp18gqkpx2kpya5f6x9cl3qng7v4h5pxx"; depends=[Biobase data_table doParallel dplyr foreach iterators MSnbase mzID mzR ProtGenerics R_cache Rcpp reshape2]; }; + MSnbase = derive2 { name="MSnbase"; version="2.4.2"; sha256="1ig64bf881p118dwqfr0ry41m7yhnyv165smv8fdwfv7sb6sagif"; depends=[affy Biobase BiocGenerics BiocParallel digest ggplot2 impute IRanges lattice MALDIquant mzID mzR pcaMethods plyr preprocessCore ProtGenerics Rcpp S4Vectors vsn XML]; }; + MSstats = derive2 { name="MSstats"; version="3.10.6"; sha256="03a9069zv0m8m28a9rh53m12rhgrc299frhqiwl1jj6b82myv5hp"; depends=[broom data_table doSNOW dplyr foreach ggplot2 ggrepel gplots limma lme4 marray MASS minpack_lm MSnbase preprocessCore purrr Rcpp reshape2 snow stringr survival tidyr]; }; + MSstatsQC = derive2 { name="MSstatsQC"; version="1.0.0"; sha256="1987j8l5q6cyyg8wpyv1mgv5s3qwdxvdb2c2qhl5svaksxlni2hi"; depends=[dplyr ggExtra ggplot2 MSnbase plotly qcmetrics RecordLinkage]; }; + MVCClass = derive2 { name="MVCClass"; version="1.52.0"; sha256="03ym7qlybs99ir629h9mmm2kqpmx1lzliql7qgbfiydpynvplahy"; depends=[]; }; + MWASTools = derive2 { name="MWASTools"; version="1.2.0"; sha256="0pgb6qnqqzz6y22cbxivx04v0rak76i2kc3aasdrz324xjv5hq09"; depends=[boot car ComplexHeatmap ggplot2 glm2 gridExtra igraph KEGGgraph KEGGREST ppcor qvalue RCurl SummarizedExperiment]; }; + MantelCorr = derive2 { name="MantelCorr"; version="1.48.0"; sha256="0jnj6cyvpk41pi9f021wgqjnrns3xcixa7gbnqaa83gv8zrm2d8n"; depends=[]; }; + MassArray = derive2 { name="MassArray"; version="1.30.0"; sha256="113d6hkzx4gn2n58ljm6awfzyjzvsa7q4rhybnfqv9rfh93q1iin"; depends=[]; }; + MassSpecWavelet = derive2 { name="MassSpecWavelet"; version="1.44.0"; sha256="1q0m4s4f7pajkc99aijaskcd4qg50w98bllsr89154vnrcaszhz0"; depends=[waveslim]; }; + MatrixRider = derive2 { name="MatrixRider"; version="1.10.0"; sha256="07msw0h3mgn9l8kdc1zzijxy62dfawrxx8rd2xw6djammb9gl1p5"; depends=[Biostrings IRanges S4Vectors TFBSTools XVector]; }; + MaxContrastProjection = derive2 { name="MaxContrastProjection"; version="1.2.0"; sha256="0a5jsm0rrxw0il17bysjy7inzf7ay9lrzi1kyxifl4k64j8ssj3r"; depends=[EBImage]; }; + MeSHDbi = derive2 { name="MeSHDbi"; version="1.14.0"; sha256="10ir9ma04cwn2kbd10anv4yqljh5p60lq53da8191psv82ni9cfx"; depends=[AnnotationDbi Biobase BiocGenerics RSQLite]; }; + MeasurementError_cor = derive2 { name="MeasurementError.cor"; version="1.50.0"; sha256="0gky9yhd7k0w83ysnjjy21m8wwjg5k5y85ba19bc1k8412x5alj8"; depends=[]; }; + MergeMaid = derive2 { name="MergeMaid"; version="2.50.0"; sha256="0bsjrm6wm732saw07l2y4mmbsdgxk5b4x74zsjjv4k92dbfbwraa"; depends=[Biobase MASS survival]; }; + Mergeomics = derive2 { name="Mergeomics"; version="1.6.0"; sha256="1m2d2clg3mj8m365zcivqdn81ira83m69cxr1s4syrl1a2cymkz6"; depends=[]; }; + MetCirc = derive2 { name="MetCirc"; version="1.6.0"; sha256="106anz431236gn0himc273h9w721wk6l9gmkilydviflb0x990j3"; depends=[amap circlize scales shiny]; }; + MetaCyto = derive2 { name="MetaCyto"; version="1.4.0"; sha256="036j7mnfgvra1ryzqiw7mpsavc0akmalryswq6n9z02gmns5sij1"; depends=[cluster fastcluster flowCore FlowSOM ggplot2 metafor tidyr]; }; + Metab = derive2 { name="Metab"; version="1.12.0"; sha256="0gnpdhvzhqs3ajdj439x2wr3b3yzx5qgb6brlw9hxz63l4fpipn7"; depends=[pander svDialogs xcms]; }; + MetaboSignal = derive2 { name="MetaboSignal"; version="1.8.0"; sha256="0qydccfbyys8gfalzcadx0hiljq2ias5qphwsdxglh1xlqkh2919"; depends=[AnnotationDbi biomaRt EnsDb_Hsapiens_v75 hpar igraph KEGGgraph KEGGREST MWASTools mygene org_Hs_eg_db RCurl]; }; + MethPed = derive2 { name="MethPed"; version="1.6.0"; sha256="0m442v7akv5r274hx56r6vkcsg4ha897ira4mbkiqfsrxscmajh2"; depends=[Biobase randomForest]; }; + MethTargetedNGS = derive2 { name="MethTargetedNGS"; version="1.10.0"; sha256="14xd5h6pgla2kh1l1rn7x2ddal98ypazqr120kyifqf05y5sf1ph"; depends=[Biostrings gplots seqinr stringr]; }; + MethylAid = derive2 { name="MethylAid"; version="1.12.0"; sha256="1km22cscxkgyx6blbsrnh5q8pj7fmw5caqnj72bzi76zw8mr0fli"; depends=[Biobase BiocGenerics BiocParallel ggplot2 gridBase hexbin matrixStats minfi RColorBrewer shiny SummarizedExperiment]; }; + MethylMix = derive2 { name="MethylMix"; version="2.8.0"; sha256="0dbsmkiidc83hncqkw4g1kz7dwdr631s4a3a982v7krfsgvcqwyi"; depends=[data_table digest foreach ggplot2 impute limma R_matlab RColorBrewer RCurl RPMM]; }; + MethylSeekR = derive2 { name="MethylSeekR"; version="1.18.0"; sha256="0d1ya2jbgqk9s4clpsaipm4l9585ycxg5bmhg4dmmcph0w6dcsjl"; depends=[BSgenome geneplotter GenomicRanges IRanges mhsmm rtracklayer]; }; + Mfuzz = derive2 { name="Mfuzz"; version="2.38.0"; sha256="18c83g8ydbb24v1n0rcp3lv533ikhs6wwchvmdbsy2whlsy3sv1i"; depends=[Biobase e1071 tkWidgets]; }; + MiChip = derive2 { name="MiChip"; version="1.32.0"; sha256="1jbwri284jzjaxml4ddz4kcmhhz48naqiydj4ixc85hk3gpjglaa"; depends=[Biobase]; }; + MiPP = derive2 { name="MiPP"; version="1.50.0"; sha256="1kdi0m4856dsal6qx458x35ybnaj960ys83dgg5w4c8420k9mv9m"; depends=[Biobase e1071 MASS]; }; + MiRaGE = derive2 { name="MiRaGE"; version="1.20.0"; sha256="1jbs427vpld18l83s5dngijc8rgllqvrili8gv4in20nr6dyk9hi"; depends=[AnnotationDbi Biobase BiocGenerics S4Vectors]; }; + MineICA = derive2 { name="MineICA"; version="1.18.0"; sha256="1zdq5i14ksm8rirbry6j1dh56r1bhy5yvfzrxfjkm94lynqcdpdy"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt cluster colorspace fastICA foreach fpc ggplot2 GOstats graph gtools Hmisc igraph JADE lumi lumiHumanAll_db marray mclust plyr RColorBrewer Rgraphviz scales xtable]; }; + MinimumDistance = derive2 { name="MinimumDistance"; version="1.22.0"; sha256="1j2g0ji1ac9608b965rr9vvbhlcbvirqypngh11havh3vn54m9rf"; depends=[Biobase BiocGenerics data_table DNAcopy ff foreach GenomeInfoDb GenomicRanges IRanges lattice matrixStats oligoClasses S4Vectors SummarizedExperiment VanillaICE]; }; + Mirsynergy = derive2 { name="Mirsynergy"; version="1.14.0"; sha256="1mwcv1fb3vda4ilmvwjrwb2qg65bgdxsvd2jd9ndaccxb7m3c2lk"; depends=[ggplot2 gridExtra igraph Matrix RColorBrewer reshape scales]; }; + MmPalateMiRNA = derive2 { name="MmPalateMiRNA"; version="1.28.0"; sha256="058nvymnnzd61a7x2vpzic1s2nm3q520cnfdhd6i09isg6kqr6c8"; depends=[Biobase lattice limma statmod vsn xtable]; }; + MoPS = derive2 { name="MoPS"; version="1.12.0"; sha256="0g4awrm90kjnk66b291y2n5vwwwzpdb3kaq96sxfc5a1af8q5q81"; depends=[Biobase]; }; + MoonlightR = derive2 { name="MoonlightR"; version="1.4.0"; sha256="0kisic6bzp2gy1yjg717izbkirlvrwb1wndckd2yvncrjzpidcq6"; depends=[Biobase circlize clusterProfiler doParallel DOSE foreach GEOquery gplots HiveR limma parmigene randomForest RColorBrewer RISmed SummarizedExperiment TCGAbiolinks]; }; + MotIV = derive2 { name="MotIV"; version="1.34.0"; sha256="0lvkzbw328mxyp2pd95ymi1nbk78jx880h00jxwdf17a5rkikgh6"; depends=[BiocGenerics Biostrings IRanges lattice rGADEM S4Vectors]; }; + MotifDb = derive2 { name="MotifDb"; version="1.20.0"; sha256="16gk7sbrk188kv3mdsnvcnfzvd2dyxm7wmmwvcqz560x0xn0l0k9"; depends=[BiocGenerics Biostrings IRanges rtracklayer S4Vectors splitstackshape]; }; + Mulcom = derive2 { name="Mulcom"; version="1.28.0"; sha256="1dh4sn64n1db2hlbx58mb49kmfassr1r92d9lphzzqhsicq78p8c"; depends=[Biobase fields]; }; + MultiAssayExperiment = derive2 { name="MultiAssayExperiment"; version="1.4.9"; sha256="0kbr2nfxkny9y6hgijr2xpzczs0ijv0g7nh37yrzgkh10rwjsflq"; depends=[Biobase BiocGenerics GenomicRanges IRanges reshape2 S4Vectors shiny shinydashboard SummarizedExperiment tidyr]; }; + MultiDataSet = derive2 { name="MultiDataSet"; version="1.6.0"; sha256="0h187dkqn63m6askai30x31va24hiv4ig0kxvp9xraz7n9zfr24g"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 ggrepel IRanges limma qqman S4Vectors SummarizedExperiment]; }; + MultiMed = derive2 { name="MultiMed"; version="1.12.0"; sha256="1b48iv34bnsbyg7j70kwi8iyikc1hxlcfmaxsc97249dfq71rfab"; depends=[]; }; + MutationalPatterns = derive2 { name="MutationalPatterns"; version="1.4.2"; sha256="08ay9h5cqsi8ypb6r0g4rfa5l1g06jgfzl64wmhgz134yqbl7vfv"; depends=[BiocGenerics Biostrings cowplot GenomeInfoDb GenomicRanges ggdendro ggplot2 gridExtra IRanges NMF plyr pracma reshape2 S4Vectors SummarizedExperiment VariantAnnotation]; }; + NADfinder = derive2 { name="NADfinder"; version="1.2.0"; sha256="0npzbgbpwir4jv8h4giar9w8vjy3rivk55bimqd9bq7m83iwqapq"; depends=[baseline BiocGenerics GenomeInfoDb GenomicAlignments GenomicRanges IRanges limma rtracklayer S4Vectors signal SummarizedExperiment trackViewer]; }; + NCIgraph = derive2 { name="NCIgraph"; version="1.26.0"; sha256="094dnqj1gss4dh8hsc8y9k98b0g33n7yy714kjavcd16glp4w7i0"; depends=[graph KEGGgraph R_methodsS3 RBGL RCy3]; }; + NGScopy = derive2 { name="NGScopy"; version="1.12.0"; sha256="1aibq3rbs52vyhcx388p7szax7v8ac023pxayqmn2xq3kzj172ah"; depends=[changepoint rbamtools Xmisc]; }; + NOISeq = derive2 { name="NOISeq"; version="2.22.1"; sha256="0v04597hwvr4y96789samj6jpgipsdv15hsmkgs3pdli48cjwff3"; depends=[Biobase Matrix]; }; + NTW = derive2 { name="NTW"; version="1.28.0"; sha256="0gkj636fmr519hylb3kc70qxmx9cw3xim0vpx60qsr0kl6h5m7hq"; depends=[mvtnorm]; }; + NanoStringDiff = derive2 { name="NanoStringDiff"; version="1.9.2"; sha256="1ss7q5zbqnkrv8fds2x3amjva5v8y8x4b5h1flh5paivdpv29frk"; depends=[Biobase matrixStats Rcpp]; }; + NanoStringQCPro = derive2 { name="NanoStringQCPro"; version="1.10.0"; sha256="0r5yf2vgn0182074fa46ziclx9dbm60j4n7yck66ck81xp0jpwps"; depends=[AnnotationDbi Biobase knitr NMF org_Hs_eg_db png RColorBrewer]; }; + NarrowPeaks = derive2 { name="NarrowPeaks"; version="1.22.0"; sha256="1ai2fdckd2d383bnwwpp60yz3f67gm8xnxqm74ah8gpn3ll9dxm8"; depends=[BiocGenerics CSAR fda GenomeInfoDb GenomicRanges ICSNP IRanges S4Vectors]; }; + NetPathMiner = derive2 { name="NetPathMiner"; version="1.14.0"; sha256="1dcpayafvarf8brd3rh9ik6ki5z2fqqzwxpxdjm5bwfb7l3ida3w"; depends=[igraph]; }; + NetSAM = derive2 { name="NetSAM"; version="1.18.0"; sha256="05m6i3gcyvc9hzmfpj9wzim9b8p5lgv984y6805nrszr7dmhlyjv"; depends=[graph igraph seriation]; }; + NormqPCR = derive2 { name="NormqPCR"; version="1.24.0"; sha256="0js03x4gqrqs0pv9m5ih34zrxgc8vcv3dil17wzgfimrm044z0yl"; depends=[Biobase qpcR RColorBrewer ReadqPCR]; }; + NuPoP = derive2 { name="NuPoP"; version="1.28.0"; sha256="1z5pgdi8l40yvbixsgajd2afyi2mkqvxgx0v4k3xxqw1w97kmrgv"; depends=[]; }; + OCplus = derive2 { name="OCplus"; version="1.52.0"; sha256="1fxfc66b8qmcq0yq1n1z7fj5d8hw0z59b3sdypdhhyw5ddcri0lf"; depends=[akima multtest]; }; + OGSA = derive2 { name="OGSA"; version="1.8.0"; sha256="1i6xh0y9ymxrdjywm8sayb7jgiyqgmz66wd94ja4f2na4xsw9gps"; depends=[Biobase gplots limma]; }; + OLIN = derive2 { name="OLIN"; version="1.56.0"; sha256="18b4hadkz1zp79ing1nd9z9456a9l6wk8is6gmzj6dbbs4g1pypc"; depends=[limma locfit marray]; }; + OLINgui = derive2 { name="OLINgui"; version="1.52.0"; sha256="115irlwwfzf7ywgbry2jwxl1h8hp6mlr9b36q509ah5c7kn58r1r"; depends=[marray OLIN tkWidgets widgetTools]; }; + OPWeight = derive2 { name="OPWeight"; version="1.0.0"; sha256="18crhxdlxixv1qp8vc5f711g1sxwhixpd5h0vb6jr9rkyq2v942b"; depends=[MASS qvalue tibble]; }; + OSAT = derive2 { name="OSAT"; version="1.26.0"; sha256="0nc79hh2vbqh864c9zac1pbghgx1fbq7maz4dxwl02hhpxj0187d"; depends=[]; }; + OTUbase = derive2 { name="OTUbase"; version="1.28.0"; sha256="019c8d2dfhf2q9zq0xgj0pakymyk48ssbqnags4hhfp684af61r6"; depends=[Biobase Biostrings IRanges S4Vectors ShortRead vegan]; }; + OmicCircos = derive2 { name="OmicCircos"; version="1.16.0"; sha256="13dw36n0lg5cafsrgkgr65al6y7jij2clyf1wzidn05p508i02m3"; depends=[GenomicRanges]; }; + OmicsMarkeR = derive2 { name="OmicsMarkeR"; version="1.10.0"; sha256="0s7zyj3xkr74w0jw604hv3v775kqjpdgks4gkkrkfa3a1xj7xa5b"; depends=[assertive assertive_base caret caTools data_table DiscriMiner e1071 foreach gbm glmnet pamr permute plyr randomForest]; }; + Onassis = derive2 { name="Onassis"; version="1.0.1"; sha256="11sq6f3qcq37i4blml024kb24ifcq1xplklv2i9c55wg299ni620"; depends=[AnnotationDbi data_table GEOmetadb OnassisJavaLibs rJava RSQLite SRAdb]; }; + OncoScore = derive2 { name="OncoScore"; version="1.6.0"; sha256="02vzvvdnisx3xhr7428xdclgx90apa49h64bvp2h3nsa0vnhnj9l"; depends=[biomaRt]; }; + OncoSimulR = derive2 { name="OncoSimulR"; version="2.8.0"; sha256="1b0myymp38j6fbd4y8ppwmsj8v9w96g8wayc20bcygm16i1zjm5k"; depends=[car data_table dplyr ggplot2 ggrepel graph gtools igraph nem RColorBrewer Rcpp Rgraphviz smatr]; }; + OperaMate = derive2 { name="OperaMate"; version="1.9.0"; sha256="11ah55sl04gm8hq3gkcz3b4shq4dxdpwlwl0wn4j82ciai0k6wsm"; depends=[fBasics ggplot2 gProfileR gridExtra pheatmap reshape2 stabledist]; }; + OrderedList = derive2 { name="OrderedList"; version="1.50.0"; sha256="1sk9ni3vyixb3vwn86vz174lfd7n7rnc8jmm1fx94pjsp9r6sbgr"; depends=[Biobase twilight]; }; + Organism_dplyr = derive2 { name="Organism.dplyr"; version="1.6.2"; sha256="12gvdrn843334f665dqqjmlny4f6nyaql4h1181q8gfpnrc6kqwp"; depends=[AnnotationDbi AnnotationFilter BiocFileCache DBI dbplyr dplyr GenomeInfoDb GenomicFeatures GenomicRanges IRanges RSQLite S4Vectors]; }; + OrganismDbi = derive2 { name="OrganismDbi"; version="1.20.0"; sha256="0yxvhwn0m53wfwp0zi81x96argdf7cf1lpymc2as51apvfcnjdl8"; depends=[AnnotationDbi Biobase BiocGenerics BiocInstaller DBI GenomicFeatures GenomicRanges graph IRanges RBGL S4Vectors]; }; + Oscope = derive2 { name="Oscope"; version="1.8.0"; sha256="02j7a9yifnsl3acrwgn83f12rf9xf6lgrhl28cp9p0zhr5ljf306"; depends=[BiocParallel cluster EBSeq testthat]; }; + OutlierD = derive2 { name="OutlierD"; version="1.42.0"; sha256="1n34110czydhff8lkhfkd0hb1xcjka5a0wnvzb3wiyaiaihca26y"; depends=[Biobase quantreg]; }; + PAA = derive2 { name="PAA"; version="1.12.0"; sha256="186gfkz9pm0bdd3zr5cnb8qzj4fqkdcrch1bmny8iwsidi3kcxph"; depends=[e1071 gplots gtools limma MASS mRMRe randomForest Rcpp ROCR sva]; }; + PADOG = derive2 { name="PADOG"; version="1.20.0"; sha256="1lp8j2phh7f0vs6w7dc6w1lbfalqhb4ymfg5n4qci8lpzs52rm75"; depends=[AnnotationDbi Biobase doRNG foreach GSA hgu133a_db hgu133plus2_db KEGG_db KEGGdzPathwaysGEO limma nlme]; }; + PANR = derive2 { name="PANR"; version="1.24.0"; sha256="0qvivfnydj4abva5r0yy3p1q4db70z8yjrzzm3ryvjal8hvrdh39"; depends=[igraph MASS pvclust RedeR]; }; + PAPi = derive2 { name="PAPi"; version="1.18.0"; sha256="1flyf97qpffl9aa1sf7q4c62npk6j3jdvh3va5m0816iwq21nm9r"; depends=[KEGGREST svDialogs]; }; + PAnnBuilder = derive2 { name="PAnnBuilder"; version="1.42.0"; sha256="144s1lzb83rb7g809v582jc0xhsw0gsy2n5wdmsd2bi3j4i8kb2q"; depends=[AnnotationDbi Biobase DBI RSQLite]; }; + PCAN = derive2 { name="PCAN"; version="1.6.0"; sha256="0inm1kfi9xvd3jhqivxh4vzc6vsijh1z7fwzsqb35rlbi2cl7snd"; depends=[BiocParallel]; }; + PCpheno = derive2 { name="PCpheno"; version="1.40.0"; sha256="1sgw116qif7w52va7qg8n51a40nvmhybvgr5nxlvgvrwylkhqfai"; depends=[annotate AnnotationDbi Biobase Category GO_db graph GSEABase KEGG_db ppiData ppiStats ScISI SLGI]; }; + PECA = derive2 { name="PECA"; version="1.14.0"; sha256="1c3nbsvng951fsg9vk3yki215f3abgsxqhd025gyvs120nw4c9kv"; depends=[affy aroma_affymetrix aroma_core genefilter limma preprocessCore ROTS]; }; + PGA = derive2 { name="PGA"; version="1.8.0"; sha256="0x410vnwgdzdkx2i9pqj22mv8jzflswl35a6xkhkr0in47hgz806"; depends=[AnnotationDbi biomaRt Biostrings customProDB data_table GenomicFeatures GenomicRanges ggplot2 IRanges Nozzle_R1 pheatmap RCurl Rsamtools RSQLite rTANDEM rtracklayer S4Vectors stringr VariantAnnotation]; }; + PGSEA = derive2 { name="PGSEA"; version="1.52.0"; sha256="1g0kfhrvq8hv4lpwq3p3p6fkm2bmfjmkfw9312jrwnbjj0hfwd34"; depends=[annaffy AnnotationDbi Biobase GO_db KEGG_db]; }; + PICS = derive2 { name="PICS"; version="2.22.0"; sha256="0jb4hzswiyrqpnazfpd6wd11gdlmv18za7fyr4slxv0rc9rkf8qm"; depends=[BiocGenerics GenomicAlignments GenomicRanges IRanges Rsamtools S4Vectors]; }; + PING = derive2 { name="PING"; version="2.22.0"; sha256="1lvbl3g2m643nypc0nfmhjpfv4zl7qk457kg9i7y7l1lzqwqsk0s"; depends=[BiocGenerics BSgenome chipseq fda GenomicRanges Gviz IRanges PICS S4Vectors]; }; + PLPE = derive2 { name="PLPE"; version="1.38.0"; sha256="1w8njdkvhs7y5j78d3y591202811sb8dsldf23yiyfihbjv61vzv"; depends=[Biobase LPE MASS]; }; + POST = derive2 { name="POST"; version="1.2.0"; sha256="1j96hqyhznq419xvvs9kkhppr6nfp0p95r5xz979pbvf8qhzypqx"; depends=[Biobase CompQuadForm GSEABase Matrix survival]; }; + PPInfer = derive2 { name="PPInfer"; version="1.5.1"; sha256="16c9ysal2v9vr54jkg0xcmrmf58l4p6qv61fmp3qxm89r833hry9"; depends=[biomaRt fgsea ggplot2 igraph kernlab STRINGdb yeastExpData]; }; + PREDA = derive2 { name="PREDA"; version="1.24.0"; sha256="09wwd4q4d2nzjwvnv0anaz3hhcykdaccnqc1azn56lqdajlgqzfz"; depends=[annotate Biobase lokern multtest]; }; + PROMISE = derive2 { name="PROMISE"; version="1.30.0"; sha256="0vc847sd638xm6f7n2b77sik9kqq9kxnmmms3qy06sbkynb0rk7h"; depends=[Biobase GSEABase]; }; + PROPER = derive2 { name="PROPER"; version="1.10.0"; sha256="0k7lpwqyflaifgs6aac55cichlf2za76gjfdijgp3f1vzvs2qn57"; depends=[edgeR]; }; + PROPS = derive2 { name="PROPS"; version="1.0.0"; sha256="1zscpjnjazw1m0bsq5x685h0pag68ddw6x0f5h99z6h06206xzki"; depends=[Biobase bnlearn reshape2 sva]; }; + PROcess = derive2 { name="PROcess"; version="1.54.0"; sha256="1x7hdbdhrbpp3qp6b604fiw13rid6dh57j9wgl0v3ligf84siv1q"; depends=[Icens]; }; + PSEA = derive2 { name="PSEA"; version="1.12.0"; sha256="16l7g49vd4j06gr9lzny663md872nhdpzpsnx3niaqmd28izm9p7"; depends=[Biobase MASS]; }; + PSICQUIC = derive2 { name="PSICQUIC"; version="1.16.4"; sha256="073lg2g1bixyiigdkixndcn29dhaznwh6v7v6ibq10h7qc5gl7k5"; depends=[BiocGenerics biomaRt httr IRanges plyr RCurl]; }; + PWMEnrich = derive2 { name="PWMEnrich"; version="4.14.0"; sha256="1aw0v9s5xy3gjsyhy04zm8xgsrv4a1n4j02zspyz6rf1acakishg"; depends=[BiocGenerics Biostrings evd gdata seqLogo]; }; + PanVizGenerator = derive2 { name="PanVizGenerator"; version="1.6.1"; sha256="1xh8p2q5znlwqcwas75kiy2fpz4va1y074z1c69p3h8h1xkivkzc"; depends=[FindMyFriends igraph jsonlite pcaMethods shiny]; }; + Path2PPI = derive2 { name="Path2PPI"; version="1.8.0"; sha256="0mzrnq3caq2nz6lckb7gbc87kq4l4nlywy2iwwjvdn6yzsxl2hb3"; depends=[igraph]; }; + PathNet = derive2 { name="PathNet"; version="1.18.0"; sha256="1rvm44y7fcf3mqy9c3hb5vx53b3xad20znbhkm4fqwgdb74dxyfv"; depends=[]; }; + PathoStat = derive2 { name="PathoStat"; version="1.4.1"; sha256="1al0h4mw5lsmn4n3d76d8p9px62l4y5c5z78md2zchnam3x9ii78"; depends=[alluvial ape BatchQC BiocStyle corpcor DESeq2 dplyr DT edgeR ggplot2 gtools knitr limma matrixStats MCMCpack pander phyloseq plyr preprocessCore rentrez reshape2 rmarkdown scales shiny tidyr XML]; }; + PathwaySplice = derive2 { name="PathwaySplice"; version="1.0.0"; sha256="1yi302xjf355xi14vx5rl6qyrm35qz9llf48fwrj7ycb41vla0fj"; depends=[AnnotationDbi AnnotationHub BiasedUrn Biobase BiocGenerics DOSE dplyr ensembldb gdata geneLenDataBase GO_db goseq gplots gridExtra htmlwidgets igraph JunctionSeq mgcv org_Hs_eg_db org_Mm_eg_db plotly RColorBrewer reshape2 S4Vectors tibble VennDiagram webshot]; }; + Pbase = derive2 { name="Pbase"; version="0.18.0"; sha256="17ya1mmz8dqrr81vcfy3ygw490bwg26xkj72mcmba17cyy0nv11x"; depends=[AnnotationFilter Biobase BiocGenerics BiocParallel biomaRt Biostrings cleaver ensembldb GenomicRanges Gviz IRanges MSnbase mzID mzR Pviz Rcpp rtracklayer S4Vectors]; }; + PharmacoGx = derive2 { name="PharmacoGx"; version="1.8.2"; sha256="0w77wpvi4qs8ngf5404m2cgac9zfj4jvkh88xcrz7zmmjmg2wvb9"; depends=[Biobase caTools downloader lsa magicaxis piano RColorBrewer reshape2]; }; + PhenStat = derive2 { name="PhenStat"; version="2.14.0"; sha256="1hjj1i083ihi7c1lc1rrh3k7513xcqpybn3aaivdjw66pi1bg7vp"; depends=[car corrplot ggplot2 graph knitr lme4 logistf MASS msgps nlme nortest pingr reshape SmoothWin]; }; + Pi = derive2 { name="Pi"; version="1.6.2"; sha256="0x3b5cs7r4cjvjjc2gx7xapzlkvg56784aj04zg6271hldpcd84j"; depends=[caret dnet GenomeInfoDb GenomicRanges ggbio ggplot2 ggrepel glmnet Gviz igraph lattice MASS Matrix plot3D randomForest ROCR scales supraHex XGR]; }; + Pigengene = derive2 { name="Pigengene"; version="1.4.2"; sha256="15wnq91k360jblns36dgx4a24jk6a7rwkj342ja0sgfc6kvwvvqb"; depends=[bnlearn C50 GO_db graph impute MASS matrixStats partykit pheatmap preprocessCore Rgraphviz WGCNA]; }; + Polyfit = derive2 { name="Polyfit"; version="1.12.0"; sha256="1gkn6g5hwa8ss156armxam9ky5fd7dj0k3gh1b0gy5plpzzyzv1h"; depends=[DESeq]; }; + Prize = derive2 { name="Prize"; version="1.8.0"; sha256="1vaf4n69pb2sa6fd79988picz08d3c46cjmxfr5qf7hxay9lbwc6"; depends=[diagram ggplot2 gplots matrixcalc reshape2 stringr]; }; + ProCoNA = derive2 { name="ProCoNA"; version="1.16.0"; sha256="06jlzcr9b6nfrlgb1wqxp7r2z8042ygjx4d2z7jzg07hqn3gymjz"; depends=[BiocGenerics flashClust GOstats MSnbase WGCNA]; }; + Prostar = derive2 { name="Prostar"; version="1.10.4"; sha256="12kdq40qnd7a1x0qcwfjiim03sh5hi9pix61mwdmmq0zc7pg54s3"; depends=[DAPAR DAPARdata data_table DT highcharter htmlwidgets rhandsontable shiny shinyAce shinyjs webshot]; }; + ProtGenerics = derive2 { name="ProtGenerics"; version="1.10.0"; sha256="16ijp50448wnabp43klx943rhdvh7x45hvy7cnpq1s4dckxhhyni"; depends=[]; }; + ProteomicsAnnotationHubData = derive2 { name="ProteomicsAnnotationHubData"; version="1.8.0"; sha256="1myd5gqr3nmbp6f1n7ilp6qjcfgm401frm4ldvxbjyppxh6m1wh5"; depends=[AnnotationHub AnnotationHubData Biobase BiocInstaller Biostrings GenomeInfoDb MSnbase mzR RCurl]; }; + PureCN = derive2 { name="PureCN"; version="1.8.1"; sha256="12wpqwz771vzz5yad67d9j1jhgi5ccxngyqcjcddqwsiws65prwc"; depends=[BiocGenerics Biostrings data_table DNAcopy edgeR futile_logger GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges limma RColorBrewer Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation VGAM]; }; + Pviz = derive2 { name="Pviz"; version="1.12.0"; sha256="1piws8xrq40qk3dkhci01wrcz4nz11rp8j2kf8rxvm9bsf2wxhk5"; depends=[Biostrings biovizBase data_table GenomicRanges Gviz IRanges]; }; + QDNAseq = derive2 { name="QDNAseq"; version="1.14.0"; sha256="0lgbv4s0xqgrs7q6ynb3c273sf7pyrp51jnc8ravq1z5g0a2zshy"; depends=[Biobase BiocParallel CGHbase CGHcall DNAcopy GenomicRanges IRanges matrixStats R_utils Rsamtools]; }; + QUALIFIER = derive2 { name="QUALIFIER"; version="1.22.0"; sha256="1lp9b3g1nlfdvd8iaryrs6314fc2rpqcdfvbr92sb114yd0kj6qp"; depends=[Biobase data_table flowCore flowViz flowWorkspace hwriter lattice latticeExtra MASS ncdfFlow reshape XML]; }; + QUBIC = derive2 { name="QUBIC"; version="1.6.4"; sha256="0sncmd1xrph5hd9y7sj53943cdf6fvhami4l8qd13qr5ikf07v0l"; depends=[biclust Matrix Rcpp RcppArmadillo]; }; + QuartPAC = derive2 { name="QuartPAC"; version="1.10.0"; sha256="1l7bljgqwsawn1naq62mcvp50fh5mhwc3qxxi7r6dy25v05ji4gr"; depends=[data_table GraphPAC iPAC SpacePAC]; }; + QuasR = derive2 { name="QuasR"; version="1.18.0"; sha256="0z87i7drfz1ssqwh27w4bhclf2k6i5bhjbfmn646pjb6qb6cvxia"; depends=[Biobase BiocGenerics BiocInstaller BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges IRanges Rbowtie Rsamtools rtracklayer S4Vectors ShortRead zlibbioc]; }; + QuaternaryProd = derive2 { name="QuaternaryProd"; version="1.6.0"; sha256="15i1lnc0k317ccvk7xdqq4hfqxip49lv0yvlkygf4xwa9g3z1vjl"; depends=[dplyr Rcpp rlist]; }; + R3CPET = derive2 { name="R3CPET"; version="1.10.0"; sha256="1cfb32rykza8h9v2h75674lhapykm3s6cym0c513mmr69vdbmqva"; depends=[BiocGenerics clues clValid data_table GenomeInfoDb GenomicRanges ggbio ggplot2 Hmisc igraph IRanges pheatmap Rcpp RCurl reshape2 S4Vectors]; }; + R453Plus1Toolbox = derive2 { name="R453Plus1Toolbox"; version="1.28.1"; sha256="1vqv4gywwird0a55qw6c9pq67jml4f8pa28zrf04gim1mgalzfyl"; depends=[Biobase BiocGenerics biomaRt Biostrings BSgenome GenomicRanges IRanges R2HTML Rsamtools S4Vectors ShortRead SummarizedExperiment TeachingDemos VariantAnnotation xtable XVector]; }; + R4RNA = derive2 { name="R4RNA"; version="1.6.0"; sha256="0qxzqf8gjmblh9xlra8554fmr59gkpiq6pa8q9xmi5y56pgpzcqv"; depends=[Biostrings]; }; + RBGL = derive2 { name="RBGL"; version="1.54.0"; sha256="18jad23i3899ypv4bg3l47cvvs3qnj1pqis2p9x0135yv5y6wnv7"; depends=[graph]; }; + RBM = derive2 { name="RBM"; version="1.10.0"; sha256="1nqmf9yiaam767f2wkwggnw6v0rymszx7chnkis0xbdsllzqb0j4"; depends=[limma marray]; }; + RBioinf = derive2 { name="RBioinf"; version="1.38.0"; sha256="01qk9ddk8bm9sl70rlwgmrkz2y7dnqzrhi13hhh0ii62s0z0gdwh"; depends=[graph]; }; + RCAS = derive2 { name="RCAS"; version="1.4.2"; sha256="0d8mm3f0lxdvngldlazql2vcfv3w7172ari0g2lp3cj101d7pyd3"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings BSgenome_Hsapiens_UCSC_hg19 cowplot data_table DBI DT genomation GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggseqlogo knitr motifRG org_Hs_eg_db pbapply pheatmap plotly plotrix proxy rmarkdown RSQLite rtracklayer S4Vectors topGO]; }; + RCASPAR = derive2 { name="RCASPAR"; version="1.24.0"; sha256="1v19pv81q0g965mks88ablznzhcdk3kfd7j2dgxx4r12bl1afawg"; depends=[]; }; + RCy3 = derive2 { name="RCy3"; version="1.8.0"; sha256="09p66zxh82j5pcjz1zn3cg43rpsp0gnkwja836m6g1i450zrialv"; depends=[graph httr RCurl RJSONIO]; }; + RCyjs = derive2 { name="RCyjs"; version="1.10.0"; sha256="0vlyh32byw49j3vfw0avknixflpjs5h599xxlbf2zc6irvncg1wg"; depends=[base64enc BiocGenerics BrowserViz graph httpuv igraph jsonlite Rcpp]; }; + RCytoscape = derive2 { name="RCytoscape"; version="1.27.1"; sha256="1ai82y181bfckq8lqs1vsax2n1jwd5krz3x4b5ys56y3qjdqrgxy"; depends=[BiocGenerics graph]; }; + RDAVIDWebService = derive2 { name="RDAVIDWebService"; version="1.16.0"; sha256="1fzv1qn7jkz0zcvj2n7ijf7z40pjp9myhxfffpafwrvbrn4qg0wg"; depends=[Category ggplot2 GO_db GOstats graph RBGL rJava]; }; + RDRToolbox = derive2 { name="RDRToolbox"; version="1.28.0"; sha256="0sm13v95m5b9jr451kbc4bichw6bhxlphxzaavkbvqh8qdv1l83q"; depends=[MASS rgl]; }; + REDseq = derive2 { name="REDseq"; version="1.24.0"; sha256="1k5d7s67gd4bjp6y6xjjplkjr7kv69iia11npmdwda743agkmyb7"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome BSgenome_Celegans_UCSC_ce2 ChIPpeakAnno IRanges multtest]; }; + REMP = derive2 { name="REMP"; version="1.2.5"; sha256="1vpx4jzh8yyjpiqw4jr4chhha5dg4p2pwjza4mfbnpkzjbdy9ssr"; depends=[AnnotationHub BiocGenerics BiocParallel Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 caret doParallel foreach GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b2_hg19 impute IRanges iterators kernlab minfi org_Hs_eg_db ranger S4Vectors settings SummarizedExperiment]; }; + RGSEA = derive2 { name="RGSEA"; version="1.12.0"; sha256="1w63gc0pqgc2ran4a5pd4qxmcj9mx9hxy4has6jbar66pa6q4sfw"; depends=[BiocGenerics]; }; + RGalaxy = derive2 { name="RGalaxy"; version="1.22.0"; sha256="1cd5my1jzhlijshd4mh5zc7gsv5jic08i1ydmysjh760q97fg99v"; depends=[Biobase BiocGenerics optparse roxygen2 XML]; }; + RGraph2js = derive2 { name="RGraph2js"; version="1.6.0"; sha256="0shrvxsm452yrd7x36m31fkmwry55jagfvqpd7hzssj0imkg521w"; depends=[digest graph rjson whisker]; }; + RIPSeeker = derive2 { name="RIPSeeker"; version="1.18.0"; sha256="0bqkzwrncww7il36273chkd3gfxmii7p566ycki9qij419pwr35y"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; + RITAN = derive2 { name="RITAN"; version="1.2.0"; sha256="199kddc19fwkfgqnbhx7v4sl5h6lj6f3wqs5xy9f9n9bg09f5rrf"; depends=[BgeeDB dynamicTreeCut ggplot2 gplots gridExtra gsubfn hash igraph knitr linkcomm MCL plotrix png ProNet RColorBrewer reshape2 RITANdata sqldf STRINGdb]; }; + RIVER = derive2 { name="RIVER"; version="1.2.0"; sha256="00j9i0hrn0j2i5rxgsax3ixj8pwm2ks9fyvp657yd5amm1vackxq"; depends=[Biobase ggplot2 glmnet pROC]; }; + RImmPort = derive2 { name="RImmPort"; version="1.6.0"; sha256="1fj69k1mb0gbajsiah23azp0ina3wvc43ghr6866glqcfh4xckj7"; depends=[data_table DBI dplyr plyr reshape2 RSQLite sqldf]; }; + RJMCMCNucleosomes = derive2 { name="RJMCMCNucleosomes"; version="1.2.0"; sha256="0xjscfbxrrfnd40dmzhrrly0v3pk1k33jdl4z19bslh89gmrmygr"; depends=[BiocGenerics BiocParallel consensusSeekeR GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; }; + RLMM = derive2 { name="RLMM"; version="1.40.0"; sha256="01mbk00fbhzldivxlr5jfy1fgfrdbd657lya3s3p7zxw7z0054a0"; depends=[MASS]; }; + RMassBank = derive2 { name="RMassBank"; version="2.6.0"; sha256="1yfnj64ybl95a7bc4980i5h6cvs2hq3nkmj9dklarcp9wfw5p59w"; depends=[Biobase digest MSnbase mzR rcdk Rcpp RCurl rjson S4Vectors XML yaml]; }; + RNASeqPower = derive2 { name="RNASeqPower"; version="1.18.0"; sha256="08x58sd6q5xm47ix2f1kkqpgyk10nnbf994i4m1wia8fjhx0hdkm"; depends=[]; }; + RNAinteract = derive2 { name="RNAinteract"; version="1.26.0"; sha256="1cscf2izpx924ai0vian9mm528mn1k618zqscss7mry13ik78p3c"; depends=[abind Biobase cellHTS2 geneplotter gplots hwriter ICS ICSNP lattice latticeExtra limma locfit RColorBrewer splots]; }; + RNAither = derive2 { name="RNAither"; version="2.26.0"; sha256="1dyxmk0j319822qf0wwd41xw7v9qdahixkhmsbv3qp6203hp49w5"; depends=[biomaRt car geneplotter limma prada RankProd splots topGO]; }; + RNAprobR = derive2 { name="RNAprobR"; version="1.10.0"; sha256="0lq0cf5g004w2gi8rs29rhdy3p49njmwnw5jhfijfj4hgkgc6caf"; depends=[BiocGenerics Biostrings GenomicAlignments GenomicFeatures GenomicRanges IRanges plyr Rsamtools rtracklayer S4Vectors]; }; + ROC = derive2 { name="ROC"; version="1.54.0"; sha256="0a60k93q0zsmj2s4gy9wgzpd5yl9xdv2g62m18z4s4dmr3ykwsdv"; depends=[]; }; + ROTS = derive2 { name="ROTS"; version="1.6.0"; sha256="12dqbwqiiz21im45iqf41nm25anf0fffip86glpydwwc0km054jh"; depends=[Biobase Rcpp]; }; + ROntoTools = derive2 { name="ROntoTools"; version="2.6.0"; sha256="0lxxqa8syanb9v4nzc93arlwg65zyf4hkgxgw6q4h62mxkabdp0d"; depends=[boot graph KEGGgraph KEGGREST Rgraphviz]; }; + RPA = derive2 { name="RPA"; version="1.34.0"; sha256="1s5d8wpy3n69f9lnsi8avwalbzzvi7v8np6bv3vcnxy3nfx0iqx3"; depends=[affy BiocGenerics phyloseq]; }; + RProtoBufLib = derive2 { name="RProtoBufLib"; version="1.0.1"; sha256="1a8psx12hwbzybkd92k9n3351g24fqqxrmq5x3sln62z2f0c7psw"; depends=[]; }; + RRHO = derive2 { name="RRHO"; version="1.18.0"; sha256="1nz643k6bahg1bizw5bgjkpv2hd7hpi87s4kh1z38jqfpfixw9lk"; depends=[VennDiagram]; }; + RSVSim = derive2 { name="RSVSim"; version="1.18.0"; sha256="0f2fv2cxwhsl6gvz3dpgk55faymdwxyry6lr3l6f2s8f6rqpnzgf"; depends=[Biostrings GenomicRanges IRanges ShortRead]; }; + RTCA = derive2 { name="RTCA"; version="1.30.0"; sha256="0y2vrqfr4qjgsq8f82a5xnfhm835wi5zqf1xlxrv4mpxm9f9jr38"; depends=[Biobase gtools RColorBrewer]; }; + RTCGA = derive2 { name="RTCGA"; version="1.8.0"; sha256="1x4kms2f7zskxqskzdi9q8adwxyi1w42kn5mj1skhgihdk5ai3b6"; depends=[assertthat data_table dplyr ggplot2 ggthemes knitr purrr rvest scales stringi survival survminer viridis XML xml2]; }; + RTCGAToolbox = derive2 { name="RTCGAToolbox"; version="2.8.0"; sha256="0r3j9ky44gfpm1qz95la23j93khd00rcg6nz20dkvrfzsdqkixah"; depends=[Biobase BiocGenerics data_table GenomeInfoDb GenomicRanges httr IRanges limma plyr RaggedExperiment RCircos RCurl RJSONIO S4Vectors SummarizedExperiment survival XML]; }; + RTN = derive2 { name="RTN"; version="2.2.0"; sha256="0h7dd0zn7fiy22ab65fh47vi5j312r6rc8c43zh4f7c3cx3ls53s"; depends=[car data_table igraph IRanges limma minet RedeR S4Vectors snow]; }; + RTNduals = derive2 { name="RTNduals"; version="1.2.0"; sha256="055milw62gndj13z0gpzi5f9zjxsnhdg8rvfm5msiyivay2ms7ki"; depends=[RTN]; }; + RTNsurvival = derive2 { name="RTNsurvival"; version="1.2.0"; sha256="072hv2b6s9k6s8bp23sq3frq8h5wx2kr4jz1j2kyih17psa5kpkb"; depends=[png RColorBrewer RTN RTNduals survival]; }; + RTopper = derive2 { name="RTopper"; version="1.24.0"; sha256="18ncjfwm1rsxrxz32n5z1a88rn0z8hlrksxlm9ninhl4igas0661"; depends=[Biobase limma multtest]; }; + RUVSeq = derive2 { name="RUVSeq"; version="1.12.0"; sha256="0hkvj1gb11ci2ywqbqdfydx9pm0wchja2lbwkqjvw2svqmc9clww"; depends=[Biobase EDASeq edgeR MASS]; }; + RUVcorr = derive2 { name="RUVcorr"; version="1.10.0"; sha256="0nhpz89x4z4dgdxynrxbpdaxbhnxk86ychnmln3vk5b9fp3yj3v2"; depends=[BiocParallel bladderbatch corrplot gridExtra lattice MASS psych reshape2 snowfall]; }; + RUVnormalize = derive2 { name="RUVnormalize"; version="1.12.0"; sha256="071p0wc0y38j2rvbbqzr6i5i2rvmmxdc3yj2fggvlbwbq2k4dfpx"; depends=[Biobase RUVnormalizeData]; }; + RVS = derive2 { name="RVS"; version="1.0.0"; sha256="1m0w3cp5395sh43b05kc7067wyvmqlq6kiczp0b868392bhaq8hs"; depends=[gRain kinship2 snpStats]; }; + RaggedExperiment = derive2 { name="RaggedExperiment"; version="1.2.5"; sha256="05zl433y8bagqvf1672zjdwxlp39g2f3qmv12xycrmgz5gs43d53"; depends=[BiocGenerics GenomicRanges IRanges S4Vectors SummarizedExperiment]; }; + RamiGO = derive2 { name="RamiGO"; version="1.23.0"; sha256="0dmr58masqca38z412lh2kfi1g498ifyz8bwy7kbk6ybjhxvklmv"; depends=[graph gsubfn igraph png RCurl RCytoscape]; }; + RankProd = derive2 { name="RankProd"; version="3.4.0"; sha256="186aadri7p4fnf76cjgi2r1ic51dicks5alfw4hzx0dzi2hyy606"; depends=[gmp Rmpfr]; }; + RareVariantVis = derive2 { name="RareVariantVis"; version="2.6.0"; sha256="1c1miqsrvf89dygg8m2axdq995axylhhdyi1gvig368l17vvcgsp"; depends=[BiocGenerics BSgenome BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb GenomicFeatures GenomicRanges GenomicScores googleVis gtools IRanges phastCons100way_UCSC_hg19 S4Vectors SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; }; + Rariant = derive2 { name="Rariant"; version="1.14.0"; sha256="1kfw2gfvdgzi5ldarmmwnksgg256vfaripcridlsb2pgwzay52k4"; depends=[dplyr exomeCopy GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges reshape2 Rsamtools S4Vectors shiny SomaticSignatures VariantAnnotation VGAM]; }; + RbcBook1 = derive2 { name="RbcBook1"; version="1.46.0"; sha256="0qj8zvhq9cq3akdl6zpspvvz9jlvc0lxrn4ap7qd984406jihyg4"; depends=[Biobase graph rpart]; }; + Rbowtie = derive2 { name="Rbowtie"; version="1.18.0"; sha256="0v3x9i6wmps7x0zpvgimzfwarg4246nbk4cpa1kim46r5jkl5m4v"; depends=[]; }; + Rbowtie2 = derive2 { name="Rbowtie2"; version="1.0.1"; sha256="1xplrih6sijbwj24k4lb0cml5pmyszmw5jzkaii5m3vign6m7wmh"; depends=[]; }; + Rcade = derive2 { name="Rcade"; version="1.20.0"; sha256="0awsdg6wfm6hykj96s8cgz2mhn2i4jl1yabg7xfj0nmd776gv5fa"; depends=[baySeq GenomeInfoDb GenomicAlignments GenomicRanges IRanges plotrix rgl Rsamtools S4Vectors]; }; + Rchemcpp = derive2 { name="Rchemcpp"; version="2.16.0"; sha256="1k5rgk944x0xy0y7l4fba1gfbiq6vnpbgmwwm520vv061v9g72nz"; depends=[ChemmineR Rcpp]; }; + RchyOptimyx = derive2 { name="RchyOptimyx"; version="2.18.0"; sha256="0lghahggrh3142rn9f2rnh517740d62bh7rc97zd2sjk3rfdb761"; depends=[flowType graph Rgraphviz sfsmisc]; }; + Rcpi = derive2 { name="Rcpi"; version="1.14.1"; sha256="1g19arw0j0h02mfvlcilhy305ksy25x8y6v4qyvfbbspj9nccn0l"; depends=[Biostrings ChemmineR doParallel fmcsR foreach GOSemSim rcdk RCurl rjson]; }; + Rdisop = derive2 { name="Rdisop"; version="1.38.0"; sha256="1s77iw418g5fchpjl590cn97yhpcp9rhynwnckiqpyyyd8bg31i4"; depends=[Rcpp RcppClassic]; }; + ReQON = derive2 { name="ReQON"; version="1.24.0"; sha256="0fsg0y2kxzkcfa6yv79w4swnw3ymjw3rbzw458a39npmavxvl08l"; depends=[rJava Rsamtools seqbias]; }; + ReactomePA = derive2 { name="ReactomePA"; version="1.22.0"; sha256="0zckjs3w0pvk64g2wf5awc6npd43irv7ac38c5v3jy13lh0p4kc2"; depends=[AnnotationDbi DOSE graphite igraph reactome_db]; }; + ReadqPCR = derive2 { name="ReadqPCR"; version="1.24.0"; sha256="1aapiyx6qx8bcx6qvr9ljg0nin2dnxlpvsm3n935d2riq94ah492"; depends=[affy Biobase]; }; + RedeR = derive2 { name="RedeR"; version="1.26.0"; sha256="03gf09mawc8ps8bx32vh2xgwqhha6gb9cm9yz1g78650mj7sanxc"; depends=[igraph]; }; + RefNet = derive2 { name="RefNet"; version="1.14.0"; sha256="1ssqj0jym17pawi3vh4y38fqj1sv59sq1sb4dsvlhkcf7c8lp33d"; depends=[AnnotationHub BiocGenerics IRanges PSICQUIC RCurl shiny]; }; + RefPlus = derive2 { name="RefPlus"; version="1.48.0"; sha256="0px6s5r72s1yscvy2k7fkgliy86z1wq7q8yfc0yjj8kj9qyi0wmy"; depends=[affy affyPLM Biobase preprocessCore]; }; + Repitools = derive2 { name="Repitools"; version="1.24.0"; sha256="1aynhawn0fssm0haqqm7y22q8sky7an5gdnixalr7yykrnyy9wia"; depends=[aroma_affymetrix BiocGenerics Biostrings BSgenome cluster DNAcopy edgeR GenomeInfoDb GenomicAlignments GenomicRanges gplots gsmoothr IRanges MASS Ringo Rsamtools Rsolnp rtracklayer S4Vectors]; }; + ReportingTools = derive2 { name="ReportingTools"; version="2.17.3"; sha256="0r0dp3s87q2706rqck2120bmq9nnmbfkxf8yyrm2i4zvkpay18yd"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category DESeq2 edgeR ggbio ggplot2 GOstats GSEABase hwriter IRanges knitr lattice limma PFAM_db R_utils XML]; }; + Rgraphviz = derive2 { name="Rgraphviz"; version="2.22.0"; sha256="1y9nyjffa9644jch0p2i3w302fmnyc2kb0c3z1f3d5zp1p4qmyqv"; depends=[graph]; }; + Rhdf5lib = derive2 { name="Rhdf5lib"; version="1.0.0"; sha256="0kkc4rprjbqn2wvbx4d49kk9l91vihccxbl4843qr1wqk6v33r1w"; depends=[]; }; + Rhtslib = derive2 { name="Rhtslib"; version="1.10.0"; sha256="1dw3p44bfr0m7w39ckc2k37sjcp1zz0b9g12mr8am15jaj6v0q2j"; depends=[zlibbioc]; }; + RiboProfiling = derive2 { name="RiboProfiling"; version="1.7.2"; sha256="0yygf098phiakaj8c74c337gbwpd0dh4haabbg2qq1k0qjw4prmp"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr reshape2 Rsamtools rtracklayer S4Vectors sqldf]; }; + Ringo = derive2 { name="Ringo"; version="1.42.0"; sha256="174zcz86x43yrg9wl1wwdhammgyxhfc3aqas3yqgrdq7vdsnxzxq"; depends=[Biobase BiocGenerics genefilter lattice limma Matrix RColorBrewer vsn]; }; + Risa = derive2 { name="Risa"; version="1.20.0"; sha256="10ypbd9qwh1rk27fwm8naf3gl05w9zlw79qyr55pk5m6x5lnn9cb"; depends=[affy Biobase biocViews Rcpp xcms]; }; + Rmagpie = derive2 { name="Rmagpie"; version="1.34.0"; sha256="1hvv8pps0q7xnsl33rammqvyj191j5gs78r2333jgscxnw4byqb7"; depends=[Biobase e1071 kernlab pamr]; }; + RmiR = derive2 { name="RmiR"; version="1.34.0"; sha256="10n8i7qirbd8xrb73ccxyj7c6bi1szx263nwjh8w2j9x4dgzx22x"; depends=[DBI RmiR_Hs_miRNA RSVGTipsDevice]; }; + RnBeads = derive2 { name="RnBeads"; version="1.10.7"; sha256="1rlxa161sgbz7p59svihk2ym70d1c5yi02rcajgp0fraf8ln8xhc"; depends=[BiocGenerics cluster ff fields GenomicRanges ggplot2 gplots gridExtra illuminaio IRanges limma MASS matrixStats methylumi plyr S4Vectors]; }; + RnaSeqGeneEdgeRQL = derive2 { name="RnaSeqGeneEdgeRQL"; version="1.1.0"; sha256="06i2fy89wck0jhpc174d81ka7jim8gjamjk0ym1j0fh3ldiw9yvm"; depends=[edgeR GO_db gplots org_Mm_eg_db]; }; + RnaSeqSampleSize = derive2 { name="RnaSeqSampleSize"; version="1.10.0"; sha256="1r0bn121bf5fcp4im4hm2c6rccgf7fb1vvxj2iri8ippc2k60d2c"; depends=[biomaRt edgeR heatmap3 KEGGREST matlab Rcpp RnaSeqSampleSizeData]; }; + Rnits = derive2 { name="Rnits"; version="1.12.0"; sha256="00ddzbjms9wpiinc021s4b50wbzdafnml96ngsmi7rd8ipr3k3vp"; depends=[affy Biobase boot ggplot2 impute limma qvalue reshape2]; }; + Roleswitch = derive2 { name="Roleswitch"; version="1.16.0"; sha256="1jp55lkfwwx08rbdkp5324ziwn5b3pzrcidk18zpplgwn4c6jsk9"; depends=[Biobase biomaRt Biostrings DBI microRNA plotrix pracma reshape]; }; + RpsiXML = derive2 { name="RpsiXML"; version="2.20.0"; sha256="0svh7fdl957q47jqc5q8sysvghs5anhj61r3zcapikbbi19x8j4i"; depends=[annotate AnnotationDbi Biobase graph hypergraph RBGL XML]; }; + Rqc = derive2 { name="Rqc"; version="1.12.0"; sha256="11l72jympxbb156llifc5qa1zx34774b0waqq3nyv351bqm2l5c8"; depends=[BiocGenerics BiocParallel BiocStyle Biostrings biovizBase digest GenomicAlignments GenomicFiles ggplot2 IRanges knitr markdown plyr Rcpp reshape2 Rsamtools S4Vectors shiny ShortRead]; }; + Rsamtools = derive2 { name="Rsamtools"; version="1.30.0"; sha256="0pjny5fjvbnfdyhl3bwxin678sha2drvs00sivxh3l772cn6yams"; depends=[BiocGenerics BiocParallel Biostrings bitops GenomeInfoDb GenomicRanges IRanges S4Vectors XVector zlibbioc]; }; + Rsubread = derive2 { name="Rsubread"; version="1.28.1"; sha256="1fvk88jmvx987hifj3j6lrvwpma66vqmvszphgsfvy6nq4j2wnr0"; depends=[]; }; + Rtreemix = derive2 { name="Rtreemix"; version="1.40.0"; sha256="1h7frl1zgkzvrfjzdc6l2xybhp68pizdi7vix012m3imfs97sj25"; depends=[Biobase graph Hmisc]; }; + S4Vectors = derive2 { name="S4Vectors"; version="0.16.0"; sha256="03s8vz33nl6mivjb7dbvj702dkypi340lji1sjban03fyyls0hw0"; depends=[BiocGenerics]; }; + SAGx = derive2 { name="SAGx"; version="1.52.0"; sha256="1fjyhs3isbzp4fk460gk4xfqs62ha9vra8blzbkng3r86axarlgd"; depends=[Biobase multtest]; }; + SANTA = derive2 { name="SANTA"; version="2.16.0"; sha256="12l03j2vh74n8lbvdr436qylaxhj3ysqg0m7crl9l30kpzg4agcv"; depends=[igraph Matrix snow]; }; + SBMLR = derive2 { name="SBMLR"; version="1.74.0"; sha256="0l2c0irfk50kiz22w8gzzsanh3dv5bpqrzfy1ba6bw5ghs066j65"; depends=[deSolve XML]; }; + SC3 = derive2 { name="SC3"; version="1.7.7"; sha256="1x9x450qnaw94px9b861zyxyyfxxbclw1bq765adfixgrlakyw1w"; depends=[BiocGenerics cluster doParallel doRNG e1071 foreach ggplot2 pheatmap Rcpp RcppArmadillo robustbase ROCR rrcov S4Vectors shiny SingleCellExperiment SummarizedExperiment WriteXLS]; }; + SCAN_UPC = derive2 { name="SCAN.UPC"; version="2.20.0"; sha256="1fgkrr6303b0hn9rdkry3rd7yskqanmxy74akxgk4nkjwf817rra"; depends=[affy affyio Biobase Biostrings foreach GEOquery IRanges MASS oligo sva]; }; + SCnorm = derive2 { name="SCnorm"; version="1.0.0"; sha256="0vpwca5gbhdm1g1xsb9451z2cvqr9c85z79whq011d52adz5fmr6"; depends=[BiocParallel cluster data_table forcats ggplot2 moments quantreg S4Vectors SummarizedExperiment]; }; + SELEX = derive2 { name="SELEX"; version="1.10.0"; sha256="0f81sa0azbh7n7vg39865pv923k2sza7md713g5fkn78vrx5q645"; depends=[Biostrings rJava]; }; + SEPA = derive2 { name="SEPA"; version="1.8.0"; sha256="0g0gqwgsn8bp9mz40dbqb4f785mhwcmb5y4jsgj16i5pv0ll59a7"; depends=[ggplot2 org_Hs_eg_db org_Mm_eg_db reshape2 segmented shiny topGO]; }; + SGSeq = derive2 { name="SGSeq"; version="1.12.0"; sha256="0wbwyr4nckjkafc1h80a0isz27lyg87r42ym4zs6nmpj0p3xv94q"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges igraph IRanges Rsamtools rtracklayer RUnit S4Vectors SummarizedExperiment]; }; + SICtools = derive2 { name="SICtools"; version="1.8.0"; sha256="0n3m3435wa95mld4b57hr31rfhlk41yw1qqi1jdnybkqgdndpqf8"; depends=[Biostrings doParallel GenomicRanges IRanges matrixStats plyr Rsamtools stringr]; }; + SIM = derive2 { name="SIM"; version="1.48.0"; sha256="1n207w5idd2v515v8ppsfx7q1wvn2zxy6if7dp2hpr0x2qvxijnf"; depends=[globaltest quantreg quantsmooth]; }; + SIMAT = derive2 { name="SIMAT"; version="1.10.0"; sha256="0gd99p8kjf1wn0xygdyppxgddp9bnp3a3grg8za2mmm8xv5r990h"; depends=[ggplot2 mzR Rcpp reshape2]; }; + SIMLR = derive2 { name="SIMLR"; version="1.4.0"; sha256="1sfd32qd39wy8a1206xkazbmvkqwhs09p7fhdn8n59xf56914pfa"; depends=[Matrix pracma Rcpp RcppAnnoy RSpectra]; }; + SISPA = derive2 { name="SISPA"; version="1.8.0"; sha256="18v8fw3l4pxh4fi18fhnqxbd1hlhp2w36s31vf58ffldq3bz1bpb"; depends=[changepoint data_table genefilter ggplot2 GSVA plyr]; }; + SLGI = derive2 { name="SLGI"; version="1.38.0"; sha256="1p0lwzmzz820npnsw9sk6x12innc39qv0ja0di7rplkmsi60z92j"; depends=[AnnotationDbi Biobase BiocGenerics GO_db lattice ScISI]; }; + SLqPCR = derive2 { name="SLqPCR"; version="1.44.0"; sha256="16kvssib1j4d5cn3b350ip2m9m7fcsgm1mgq13wbfnwcd6sx52kb"; depends=[]; }; + SMAP = derive2 { name="SMAP"; version="1.42.0"; sha256="0n2f1qib0k9rxdizmrazxp2wnf6ycaz90b0vzszvakawc9np36dq"; depends=[]; }; + SMITE = derive2 { name="SMITE"; version="1.6.0"; sha256="1s5gsgf878996hvd15gbjas7lyxlsw7s4xxcpcmgnlzq1dxyq0ma"; depends=[AnnotationDbi Biobase BioNet geneLenDataBase GenomicRanges ggplot2 goseq Hmisc igraph IRanges KEGG_db org_Hs_eg_db plyr reactome_db S4Vectors scales]; }; + SNAGEE = derive2 { name="SNAGEE"; version="1.18.0"; sha256="0315x8dl21i9zysp55nmjikha9fxykw8lzba4bk7gf0bc0947i26"; depends=[SNAGEEdata]; }; + SNPRelate = derive2 { name="SNPRelate"; version="1.12.2"; sha256="05x0jjybzkyvjc9sq590hg2lc6fjxqmnlvgvwc0d7pyri5pa4rki"; depends=[gdsfmt]; }; + SNPchip = derive2 { name="SNPchip"; version="2.24.0"; sha256="1z0708rqn9h9ajmdqv44y2yl0gqqg9gy1h5yj3wzjpj4dgy5d4l0"; depends=[Biobase foreach GenomeInfoDb GenomicRanges IRanges lattice oligoClasses S4Vectors SummarizedExperiment]; }; + SNPediaR = derive2 { name="SNPediaR"; version="1.4.1"; sha256="083i242x2a133wgpbi6plw7hs426b4qsgl7792akr0fm965mnna5"; depends=[jsonlite RCurl]; }; + SNPhood = derive2 { name="SNPhood"; version="1.8.0"; sha256="082fwmzdjwgn2x33isi81a05l557367ham162li3q76g2jfcmh7r"; depends=[BiocGenerics BiocParallel Biostrings checkmate cluster data_table DESeq2 GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges lattice RColorBrewer reshape2 Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; }; + SPEM = derive2 { name="SPEM"; version="1.18.0"; sha256="05gpj1fykiw8xjcbd6splqkb8jsyksnhzl6g6pzinpbczhslq55a"; depends=[Biobase Rsolnp]; }; + SPIA = derive2 { name="SPIA"; version="2.30.0"; sha256="0m2vv6zj0vgd98w2jrlbwbyn998ml2i2wr9160gmq5h77rn91xq3"; depends=[KEGGgraph]; }; + SPLINTER = derive2 { name="SPLINTER"; version="1.4.0"; sha256="06xamivcwlpwj6n8c3wzgd5ykh21q2mrdl7zz1bnicq5npha99l9"; depends=[biomaRt Biostrings BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 Gviz IRanges plyr S4Vectors seqLogo]; }; + SPONGE = derive2 { name="SPONGE"; version="1.0.2"; sha256="100gbcysmf3fhn22zmvvx2sck6hhfgc7ar782l822vbsig1vnyk9"; depends=[bigmemory Biobase data_table doRNG expm foreach glmnet gRbase igraph iterators logging MASS ppcor]; }; + SQUADD = derive2 { name="SQUADD"; version="1.28.0"; sha256="1z139p0xbaq4gvd9acxnd8dlapdsiaab1fj10pc7wx2iz4dj9zd6"; depends=[RColorBrewer]; }; + SRAdb = derive2 { name="SRAdb"; version="1.40.0"; sha256="18aayqid2fhhkjf7anlk34qw3fj3byxsxcrw2lmq4s4mqq06k5vh"; depends=[GEOquery graph RCurl RSQLite]; }; + SRGnet = derive2 { name="SRGnet"; version="1.4.0"; sha256="1a2as38svd6vp6pdllir4gs6jqicg7n7ya42ffjgiy2rpnyijbci"; depends=[DMwR EBcoexpress gbm Hmisc igraph limma MASS matrixStats pvclust]; }; + SSPA = derive2 { name="SSPA"; version="2.18.0"; sha256="0dq4j299yjg5wq40f3qdm8hi0vv6zg1d04hml1rw25s1ws2pngyj"; depends=[lattice limma qvalue]; }; + STAN = derive2 { name="STAN"; version="2.6.0"; sha256="09aal6p3sdbvcp6dkrj533x3m1qxxrkgsk35j9idz643vv133xjp"; depends=[BiocGenerics GenomeInfoDb GenomicRanges Gviz IRanges poilog Rsolnp S4Vectors]; }; + STATegRa = derive2 { name="STATegRa"; version="1.12.0"; sha256="08k2chi5cgpj2xxi16jzc3prsp3qpwwq0f4wrqzd9rwj6f9afwk5"; depends=[affy Biobase calibrate edgeR foreach ggplot2 gplots gridExtra limma MASS]; }; + STRINGdb = derive2 { name="STRINGdb"; version="1.18.0"; sha256="0hrhjx4cpl2zp2chgyw0ayadsv8g1nnarn7gyxni76ci4wayh7bf"; depends=[gplots hash igraph plotrix plyr png RColorBrewer RCurl sqldf]; }; + STROMA4 = derive2 { name="STROMA4"; version="1.2.0"; sha256="06g2p52mgc3f9hzyqcjbcfvk28fx6ynf3c9gbwvchibjaiqdy1sh"; depends=[Biobase BiocParallel cluster matrixStats]; }; + SVAPLSseq = derive2 { name="SVAPLSseq"; version="1.4.0"; sha256="190r34lir810hla9wp3pwl3w2yvw5x532988vyvjzl49wdhq535n"; depends=[edgeR ggplot2 limma lmtest pls SummarizedExperiment]; }; + SVM2CRM = derive2 { name="SVM2CRM"; version="1.10.0"; sha256="0v4qgs4bmi44i36pm5y7bdkjiwj853738j8f7rxzqnp3y8nbbwjn"; depends=[AnnotationDbi GenomicRanges IRanges LiblineaR mclust pls ROCR rtracklayer squash SVM2CRMdata verification zoo]; }; + SWATH2stats = derive2 { name="SWATH2stats"; version="1.8.1"; sha256="1hd4gxb2p81v2d9x4zw0asfm7r9s0wq2flnpl9g7r9fxm2yfi339"; depends=[data_table ggplot2 reshape2]; }; + SamSPECTRAL = derive2 { name="SamSPECTRAL"; version="1.32.0"; sha256="0n1pjpgdsisq4zv9dny3bfzjz3ga1cibh2gmm5irplfxgpcdlnqa"; depends=[]; }; + ScISI = derive2 { name="ScISI"; version="1.50.0"; sha256="0ssyx32bcaz40yr9iraczk9p53ymia4m8nfsmzxzr804fyz8hnvw"; depends=[annotate AnnotationDbi apComplex GO_db org_Sc_sgd_db RpsiXML]; }; + Scale4C = derive2 { name="Scale4C"; version="1.0.0"; sha256="035fyjswn23s6az36j5b94b1aj31n6yb5w243bqqwvqrl2kqhkdv"; depends=[GenomicRanges IRanges smoothie SummarizedExperiment]; }; + SemDist = derive2 { name="SemDist"; version="1.12.0"; sha256="1h3ld34h61sx228ix68sg86y3w9mzh3iq1gdri0lbixvhzx9w25b"; depends=[annotate AnnotationDbi GO_db]; }; + SeqArray = derive2 { name="SeqArray"; version="1.18.2"; sha256="05w051i63af4akr6zna9w14bdyi06bpif0vab9yvf6iwq2ag72kz"; depends=[Biostrings gdsfmt GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; + SeqGSEA = derive2 { name="SeqGSEA"; version="1.18.0"; sha256="1vaqa6jkvwxpbqnz9wz3i6p26mky6d7d704cjv5as67j04v99b2a"; depends=[Biobase biomaRt DESeq doParallel]; }; + SeqSQC = derive2 { name="SeqSQC"; version="1.0.0"; sha256="0qj1y9zsjxkh08jkw80hl62072viincq1pvcz9r3i0m28nhk7pg5"; depends=[e1071 ExperimentHub gdsfmt GenomicRanges GGally ggplot2 IRanges rbokeh RColorBrewer reshape2 rmarkdown S4Vectors SNPRelate]; }; + SeqVarTools = derive2 { name="SeqVarTools"; version="1.16.0"; sha256="14n70xzj91f4rshl0kx549rqzy9rrv5mv0b0xvj891i8anxahb2n"; depends=[Biobase dplyr gdsfmt GenomicRanges GWASExactHW IRanges logistf S4Vectors SeqArray tidyr]; }; + ShortRead = derive2 { name="ShortRead"; version="1.36.0"; sha256="06mknlsmd4hnaxzdjapgvp2kgdnf9w103y500dsac5jgsz4vwzcz"; depends=[Biobase BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges hwriter IRanges lattice latticeExtra Rsamtools S4Vectors XVector zlibbioc]; }; + SigCheck = derive2 { name="SigCheck"; version="2.10.0"; sha256="1k2xmb7jcjbdxafr8fspf9pbc0jwcll914lqc42gvhhjq6rnf8q4"; depends=[Biobase BiocParallel e1071 MLInterfaces survival]; }; + SigFuge = derive2 { name="SigFuge"; version="1.16.0"; sha256="0ddy6bayb05gsgh06p5awhjwyx57z0l8fb5x6p0dci2fgzy6gr4f"; depends=[GenomicRanges ggplot2 matlab reshape sigclust]; }; + SimBindProfiles = derive2 { name="SimBindProfiles"; version="1.16.0"; sha256="0jkd78wl5ksm05qjmsx7s8aznh3kfpi34yvxaxv763pqjqzkxa82"; depends=[Biobase limma mclust Ringo]; }; + SingleCellExperiment = derive2 { name="SingleCellExperiment"; version="1.0.0"; sha256="1r276i97w64a5vdlg6952gkj7bls909p42zl8fn8yz87cdwyaars"; depends=[BiocGenerics S4Vectors SummarizedExperiment]; }; + SomaticSignatures = derive2 { name="SomaticSignatures"; version="2.14.0"; sha256="107ykkkfy4xpvaflqpsbxkbw5514pxkicffpr24p3x5lj5zp6b8h"; depends=[Biobase Biostrings GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges NMF pcaMethods proxy reshape2 S4Vectors VariantAnnotation]; }; + SpacePAC = derive2 { name="SpacePAC"; version="1.16.0"; sha256="1dc8z66kzn6lxrc2xz3kyl7fjxy0i0gvjgxc9w3fqvdhkxqp7k6n"; depends=[iPAC]; }; + SpeCond = derive2 { name="SpeCond"; version="1.32.0"; sha256="1k54zxj224fshnx76hsjxkwaj9vb6387ssgpr0v3zgnf7p4zf4sx"; depends=[Biobase fields hwriter mclust RColorBrewer]; }; + SpidermiR = derive2 { name="SpidermiR"; version="1.8.2"; sha256="144rfrp55cbcqjnlv93mannfvk33wrxw2sxf5yabs75y2hvi63ri"; depends=[AnnotationDbi gdata ggplot2 gplots gridExtra httr igraph lattice latticeExtra miRNAtap miRNAtap_db networkD3 org_Hs_eg_db TCGAbiolinks visNetwork]; }; + SplicingGraphs = derive2 { name="SplicingGraphs"; version="1.18.0"; sha256="1pvi2vc5jca4mpangyfllbh5h16015kmcdrwhs32a25wp0fpqhq3"; depends=[BiocGenerics GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph igraph IRanges Rgraphviz Rsamtools S4Vectors]; }; + StarBioTrek = derive2 { name="StarBioTrek"; version="1.4.0"; sha256="137y50vxz2jd8lmb7zx3f25by0imzvarimrpfxg7v6marcgpd3nj"; depends=[AnnotationDbi e1071 igraph KEGGREST org_Hs_eg_db ROCR SpidermiR]; }; + Starr = derive2 { name="Starr"; version="1.34.0"; sha256="0wqcp98v2isy2bnq3qyf5v5lzy19kap2i6qbi9d5mlaxqjrq5afq"; depends=[affxparser affy MASS pspline Ringo zlibbioc]; }; + Streamer = derive2 { name="Streamer"; version="1.24.0"; sha256="1bmjvg2lb9qmh0fffgkw4wpmjv5rg9iwqhmxz30ciiw8vw6xcklq"; depends=[BiocGenerics graph RBGL]; }; + SummarizedExperiment = derive2 { name="SummarizedExperiment"; version="1.8.1"; sha256="19vlwnby83fqjrilsxvnvgz0gvby7mrxvlmx18nb3p1w591ddfjh"; depends=[Biobase BiocGenerics DelayedArray GenomeInfoDb GenomicRanges IRanges Matrix S4Vectors]; }; + Sushi = derive2 { name="Sushi"; version="1.16.0"; sha256="0axaqm480z8d0b2ldgxwm0swava1p4irc62bpl17p2k8k78g687g"; depends=[biomaRt zoo]; }; + SwathXtend = derive2 { name="SwathXtend"; version="2.0.0"; sha256="1v8mil305503cpspwk9zln3csv2f1h72afjdddpzks9didq5i3xf"; depends=[e1071 lattice openxlsx VennDiagram]; }; + SwimR = derive2 { name="SwimR"; version="1.16.0"; sha256="033hh3bpkn6qladvn7iz0fvrbphffzy1rkvmi0j32v9n9h88lizz"; depends=[gplots heatmap_plus R2HTML signal]; }; + TCC = derive2 { name="TCC"; version="1.18.0"; sha256="10nmha786k85jr93vbnlsxkrr2wiykxa5rl2z5ry49w14fis82m5"; depends=[baySeq DESeq DESeq2 edgeR ROC samr]; }; + TCGAbiolinks = derive2 { name="TCGAbiolinks"; version="2.6.12"; sha256="0pih8jpzffsjlhamfpvgcapa48dq2m86f4hxqr5m5z4vgjd7j1mv"; depends=[biomaRt circlize ComplexHeatmap ConsensusClusterPlus data_table doParallel downloader dplyr EDASeq edgeR genefilter GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggrepel ggthemes gridExtra httr IRanges jsonlite knitr limma matlab plyr R_utils RColorBrewer readr rvest S4Vectors scales selectr stringr SummarizedExperiment survival survminer sva tibble XML xml2]; }; + TCGAbiolinksGUI = derive2 { name="TCGAbiolinksGUI"; version="1.4.2"; sha256="1g81w346lvws8bcm8w94b1r3jjr1zfg5ln80p0rq69gzv9hkdjyw"; depends=[clusterProfiler colourpicker data_table downloader DT ELMER ggplot2 ggrepel maftools pathview plotly readr shiny shinyBS shinydashboard shinyFiles shinyjs stringr SummarizedExperiment TCGAbiolinks]; }; + TCseq = derive2 { name="TCseq"; version="1.2.0"; sha256="07wbp4caw18g1mf5h40i1c1y7jadfqmx3p7a8zz5rjjibsfa2bw1"; depends=[BiocGenerics cluster e1071 edgeR GenomicAlignments GenomicRanges ggplot2 IRanges locfit reshape2 Rsamtools SummarizedExperiment]; }; + TDARACNE = derive2 { name="TDARACNE"; version="1.28.0"; sha256="0agzpgz39ya46kgnz95ff2h0hml2mb14fb3pdj218adas24zq9jf"; depends=[Biobase GenKern Rgraphviz]; }; + TEQC = derive2 { name="TEQC"; version="3.18.0"; sha256="0rnqlk677hcf2w3whc9gdqm21gjqf4rsanaw8a847jc7li8isnpj"; depends=[Biobase BiocGenerics hwriter IRanges Rsamtools]; }; + TFARM = derive2 { name="TFARM"; version="1.0.0"; sha256="050hpw7xaw7di6m9lgb1ac6cnp3lcv4f9l9d9r3rm1i42q51l8gs"; depends=[arules fields GenomicRanges stringr]; }; + TFBSTools = derive2 { name="TFBSTools"; version="1.16.0"; sha256="0sivvbqmw5psciyzm5dyyjq9bpcvnhxz8kxis3zgkm9mmjgx84hy"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome caTools CNEr DBI DirichletMultinomial GenomeInfoDb GenomicRanges gtools IRanges RSQLite rtracklayer S4Vectors seqLogo TFMPvalue XML XVector]; }; + TFHAZ = derive2 { name="TFHAZ"; version="1.0.0"; sha256="0kxri2yv12pc9hq55i7qcjlk64p7w0i9kgbf2im2rzlbdb8xc3cm"; depends=[GenomicRanges IRanges S4Vectors]; }; + TIN = derive2 { name="TIN"; version="1.10.0"; sha256="16lv7k4js3zbak0b1m2mlimd1f56gif3vlm2hpc5vx1y315mz9gd"; depends=[aroma_affymetrix data_table impute squash stringr WGCNA]; }; + TMixClust = derive2 { name="TMixClust"; version="1.0.1"; sha256="1mv9hv5hjg55mwbp824n5b74w8zcb9sv8a1wa6hxmfb00n6wcr4h"; depends=[Biobase BiocParallel cluster flexclust gss mvtnorm SPEM zoo]; }; + TPP = derive2 { name="TPP"; version="3.6.0"; sha256="1gma7lfnq1ybcqnl9536wv22advjaqxmysfgamrgn38zwbcwhdi9"; depends=[Biobase biobroom broom data_table doParallel dplyr foreach futile_logger ggplot2 gridExtra knitr limma magrittr MASS mefa nls2 openxlsx plyr purrr RColorBrewer RCurl reshape2 rmarkdown sme stringr tidyr VennDiagram VGAM]; }; + TRONCO = derive2 { name="TRONCO"; version="2.10.0"; sha256="1lvzfx75z50r8kd3yrcjwzvsg16yi5644rz90bm1l6hpkmw2wcpf"; depends=[bnlearn cgdsr circlize doParallel foreach gridExtra gtable gtools igraph iterators R_matlab RColorBrewer Rgraphviz scales xtable]; }; + TReNA = derive2 { name="TReNA"; version="0.99.10"; sha256="1yiq953w6830v1fba4gglnf485m6lis11qlpp9g1jw0x4s0rpg70"; depends=[DBI doParallel flare foreach GenomicRanges glmnet lassopv randomForest RPostgreSQL RSQLite vbsr]; }; + TSCAN = derive2 { name="TSCAN"; version="1.16.0"; sha256="0m88r5yg46ra8k6ymzfrk68fqbg2y47kshzgj5flblbay079hnxg"; depends=[combinat fastICA ggplot2 gplots igraph mclust mgcv plyr shiny]; }; + TSRchitect = derive2 { name="TSRchitect"; version="1.4.0"; sha256="0qymyjmzpi1n5fpyzw8riz32kwsc2bi1cw3sx9sxvpvhjk45dmyx"; depends=[AnnotationHub BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; + TSSi = derive2 { name="TSSi"; version="1.24.0"; sha256="03i7nnqnbhjpyx8z8gpwysrgi9ln89pgdqaisyk0cmxrsnpp9wxa"; depends=[Biobase BiocGenerics Hmisc IRanges minqa plyr S4Vectors]; }; + TVTB = derive2 { name="TVTB"; version="1.4.0"; sha256="1p167jjcmsfh2y1wlc5r9j7i4cpdq3kjjnykcq4if737d3xyw15b"; depends=[AnnotationFilter BiocGenerics BiocParallel Biostrings ensembldb ensemblVEP GenomeInfoDb GenomicRanges GGally ggplot2 Gviz IRanges limma reshape2 Rsamtools S4Vectors SummarizedExperiment VariantAnnotation]; }; + TarSeqQC = derive2 { name="TarSeqQC"; version="1.8.0"; sha256="0xpsjl470sa0kvmi3yz25fx9j657d19cbspxxy9vhpr60wyfahpp"; depends=[BiocGenerics BiocParallel Biostrings cowplot GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 Hmisc IRanges openxlsx plyr reshape2 Rsamtools S4Vectors]; }; + TargetScore = derive2 { name="TargetScore"; version="1.16.0"; sha256="1davh5chqz8y94ddpzmnjh79m5678yxjk120bfl7857y888ywhc7"; depends=[Matrix pracma]; }; + TargetSearch = derive2 { name="TargetSearch"; version="1.34.0"; sha256="03ndkhwzgbr005v6m6wppylcg862nnfb69fgmjm9nfxrp70vviy6"; depends=[ncdf4]; }; + TitanCNA = derive2 { name="TitanCNA"; version="1.16.0"; sha256="00xf005mndqx79y8w6c10p02xyshjv0cmd3wxib73d2s1ns482s6"; depends=[data_table dplyr foreach GenomeInfoDb GenomicRanges IRanges Rsamtools VariantAnnotation]; }; + TnT = derive2 { name="TnT"; version="1.0.1"; sha256="110h66824anbgsbw3cp74yzlka1v8wmkz6fhgs3n51iz6qikk6f9"; depends=[Biobase data_table GenomeInfoDb GenomicRanges htmlwidgets IRanges jsonlite knitr S4Vectors]; }; + ToPASeq = derive2 { name="ToPASeq"; version="1.11.0"; sha256="1qbx2n8zlmb5gvmy8r91hxli268vbvd4a5blzl2jwa1v3fb09rim"; depends=[AnnotationDbi Biobase clipper DESeq DESeq2 doParallel edgeR fields graph graphite gRbase KEGGgraph limma locfit qpgraph R_utils RBGL Rcpp Rgraphviz SummarizedExperiment TeachingDemos]; }; + TransView = derive2 { name="TransView"; version="1.22.0"; sha256="1306l12khnd5xnaimf4rk85nylik4im95f1m56p44rpmhgs33gq6"; depends=[BiocGenerics GenomicRanges gplots IRanges Rsamtools S4Vectors zlibbioc]; }; + TurboNorm = derive2 { name="TurboNorm"; version="1.26.0"; sha256="0ayn3my5n78y91sj8z92vxj8s7i8jlhh9nbwqf4b541p5xvbc2sd"; depends=[affy convert lattice limma marray]; }; + TypeInfo = derive2 { name="TypeInfo"; version="1.44.0"; sha256="05q3h91vhbmp9irvsc1mgwkilzqz87wc6cbk78kk979s225fsqis"; depends=[]; }; + UNDO = derive2 { name="UNDO"; version="1.20.0"; sha256="0i0xdc74mmarr57fk15c4iyq9pm2zgic8ini0ldbk1hx5ci3if6x"; depends=[Biobase BiocGenerics boot MASS nnls]; }; + UniProt_ws = derive2 { name="UniProt.ws"; version="2.18.0"; sha256="071qmc0jy58wabxwqrv6w4rlg42xj5rzb12ji56a5pdsh1j2nrfw"; depends=[AnnotationDbi BiocGenerics RCurl RSQLite]; }; + Uniquorn = derive2 { name="Uniquorn"; version="1.6.0"; sha256="05cy9yfw4qb5drxjmisahcca729vdqb6l9qfmrar897bwm2kwb7h"; depends=[BiocParallel DBI R_utils RSQLite stringr WriteXLS]; }; + VanillaICE = derive2 { name="VanillaICE"; version="1.40.0"; sha256="14swl2fvi56583zmqsfwd5kxvzdn2xm9rf1b0x0r7nn62hkzdmp2"; depends=[Biobase BiocGenerics BSgenome_Hsapiens_UCSC_hg18 crlmm data_table foreach GenomeInfoDb GenomicRanges IRanges lattice matrixStats oligoClasses S4Vectors SummarizedExperiment]; }; + VariantAnnotation = derive2 { name="VariantAnnotation"; version="1.24.5"; sha256="07ywn3c4w83l3sr76d0z3b1nv9icgdh3phsjlc6cfx7i6nfmvxw2"; depends=[AnnotationDbi Biobase BiocGenerics Biostrings BSgenome DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment XVector zlibbioc]; }; + VariantFiltering = derive2 { name="VariantFiltering"; version="1.14.0"; sha256="1w959g9iyqiijzr8w3xf4i1pb2jjasyvzwrvyhjymn3xgj7hqiab"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicFeatures GenomicRanges GenomicScores graph Gviz IRanges RBGL Rsamtools S4Vectors shiny SummarizedExperiment VariantAnnotation XVector]; }; + VariantTools = derive2 { name="VariantTools"; version="1.20.0"; sha256="1ma1qs9n606a5gjcm8l9fna8vfg5f8ixdzriwaalhys22pyjgqsy"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicFeatures GenomicRanges IRanges Matrix Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; + Vega = derive2 { name="Vega"; version="1.26.0"; sha256="1kya7h7xa47d7l3svkpnkwjg49izpjfird5fjja6490ynr1a55yd"; depends=[]; }; + VegaMC = derive2 { name="VegaMC"; version="3.16.0"; sha256="1lmgmaf4andfxv2z4h2pahyggnic5wj61llzkm8q4k0q7i50l63i"; depends=[Biobase biomaRt genoset]; }; + XBSeq = derive2 { name="XBSeq"; version="1.8.0"; sha256="07123c1wd3l7lj29kaa0d83dlv7zsrx8gk8aag7g0h8k9vlhcni4"; depends=[Biobase DESeq2 dplyr ggplot2 locfit magrittr matrixStats pracma roar]; }; + XDE = derive2 { name="XDE"; version="2.24.0"; sha256="11g74znfafp03q710mhmzgxap6f7j04b75jhm7x6lmd6cbwqh25p"; depends=[Biobase BiocGenerics genefilter GeneMeta gtools MergeMaid mvtnorm RColorBrewer siggenes]; }; + XVector = derive2 { name="XVector"; version="0.18.0"; sha256="1i4i3kdxr78lr1kcxq657p11ybi7kq10c8kyaqyh6gfc8i9rhvmk"; depends=[BiocGenerics IRanges S4Vectors zlibbioc]; }; + YAPSA = derive2 { name="YAPSA"; version="1.4.0"; sha256="0jv940xdqrbb8hw13nm6cky767zn9k8wh6sh5vz5b7hgh7c75kww"; depends=[circlize ComplexHeatmap corrplot dendextend GenomeInfoDb GenomicRanges GetoptLong ggplot2 gridExtra gtrellis KEGGREST lsei PMCMR reshape2 SomaticSignatures VariantAnnotation]; }; + a4 = derive2 { name="a4"; version="1.26.0"; sha256="1fvnpk4bqvglqq04mykk7k57f52phmv8b77mn33hd0lli0ym9a90"; depends=[a4Base a4Classif a4Core a4Preproc a4Reporting]; }; + a4Base = derive2 { name="a4Base"; version="1.26.0"; sha256="0kj0svm9c7cbrdwm1wqj76jg9vkq34jqqq2b249ss44d17y1cr2s"; depends=[a4Core a4Preproc annaffy AnnotationDbi Biobase genefilter glmnet gplots limma mpm multtest]; }; + a4Classif = derive2 { name="a4Classif"; version="1.26.0"; sha256="1i14390103kzafbk5ark9n7svw78jm1pkcv4dwwz8q3ibywanyyz"; depends=[a4Core a4Preproc glmnet MLInterfaces pamr ROCR varSelRF]; }; + a4Core = derive2 { name="a4Core"; version="1.26.0"; sha256="1sbg7aaprmkw381y2b3mjw7fsl0p8xy3gciwfysc4f2fxmxcq51y"; depends=[Biobase glmnet]; }; + a4Preproc = derive2 { name="a4Preproc"; version="1.26.0"; sha256="058fjw1l82gmk50kjxsy98zxc22fy1k9cj7bk45dxf5ahzpklg0b"; depends=[AnnotationDbi]; }; + a4Reporting = derive2 { name="a4Reporting"; version="1.26.0"; sha256="1v21sqib2rmrgw2ij4vcb4hbiqybbn7b40x65594xygkridaw4vv"; depends=[annaffy xtable]; }; + aCGH = derive2 { name="aCGH"; version="1.56.0"; sha256="0878jpirklqlpl90qwcf6cj3jdiadcywk0ilhbiqcmdxlsf0w549"; depends=[Biobase cluster multtest survival]; }; + acde = derive2 { name="acde"; version="1.8.0"; sha256="0hfby7fdvvj0ip2r27z4c0i6ap18nh08c7gas8vrrrqbznprsqjg"; depends=[boot]; }; + adSplit = derive2 { name="adSplit"; version="1.48.0"; sha256="13bvql5kd6dz5gpwjyp1b91n8xr4kc9b3sy1m1g184452ccin5na"; depends=[AnnotationDbi Biobase cluster GO_db KEGG_db multtest]; }; + affxparser = derive2 { name="affxparser"; version="1.50.0"; sha256="1nyzr5277np3dqig4fpnhx6xqsswsrp7rmb6ll6gram47k9l2hf9"; depends=[]; }; + affy = derive2 { name="affy"; version="1.56.0"; sha256="0jmbkimma5ffsdkk3xp03g4lpz84gd95nkqakif2nqq6wmx0syrj"; depends=[affyio Biobase BiocGenerics BiocInstaller preprocessCore zlibbioc]; }; + affyContam = derive2 { name="affyContam"; version="1.36.0"; sha256="17sjgm12y66z22y442mg9dh1b4yivi6cz8gdm49q3szibxgjprv8"; depends=[affy affydata Biobase]; }; + affyILM = derive2 { name="affyILM"; version="1.30.0"; sha256="080z6cavmphrqh4y3cbf2cclzbljl7v2rwrcdsrz3h5pnisf064b"; depends=[affxparser affy Biobase gcrma]; }; + affyPLM = derive2 { name="affyPLM"; version="1.54.0"; sha256="04h7wvxcdqkwpywlbwycvm9l5az6z5hqw44s33vcx9xpnhbsw7q8"; depends=[affy Biobase BiocGenerics gcrma preprocessCore zlibbioc]; }; + affyPara = derive2 { name="affyPara"; version="1.38.0"; sha256="1jb80dlm3zmrfjq60y0gnb8530pma22b6zkd9crlczl120sfiybv"; depends=[affy affyio aplpack snow vsn]; }; + affyQCReport = derive2 { name="affyQCReport"; version="1.56.0"; sha256="0jdhswh8y7fj55k3c4lk9nfr8vqp41mvg0jla1rh7y0qjh0fkv4c"; depends=[affy affyPLM Biobase genefilter lattice RColorBrewer simpleaffy xtable]; }; + affycomp = derive2 { name="affycomp"; version="1.54.0"; sha256="12ckmzi5z0gxccrycgprvd0hzz52ygryqszgbkxdnnrcwcgbb4x0"; depends=[Biobase]; }; + affycoretools = derive2 { name="affycoretools"; version="1.50.6"; sha256="11d5k4lnpsnm6aa5j3352l4cyfrlhigp2fnykkwkqwc7714a02mg"; depends=[affy AnnotationDbi Biobase BiocGenerics DBI edgeR gcrma ggplot2 GOstats gplots hwriter lattice limma oligoClasses ReportingTools RSQLite S4Vectors xtable]; }; + affyio = derive2 { name="affyio"; version="1.48.0"; sha256="1pzzp3d3dbmyf34gvivfiprkpscn36rgvhrq853a1d3avcwr5ak9"; depends=[zlibbioc]; }; + affylmGUI = derive2 { name="affylmGUI"; version="1.52.0"; sha256="1k1wkiajdnkcfrvdmhjgc969hyq7gk53ni2khqcw8jqv9kqqa1r1"; depends=[affy affyio affyPLM BiocGenerics BiocInstaller gcrma limma R2HTML tkrplot xtable]; }; + affypdnn = derive2 { name="affypdnn"; version="1.52.0"; sha256="02js489yb6nni3i7jrl1zz0bm5xs6a47pb6nq72fmh1frwikx37w"; depends=[affy]; }; + agilp = derive2 { name="agilp"; version="3.10.0"; sha256="0yyvmlyxajad1f7fx91bsq3rbwm5i4vyr1vpp6y4vicaxmnlkas3"; depends=[]; }; + alpine = derive2 { name="alpine"; version="1.4.0"; sha256="16ip0pmdxm7bhnnk5z376miwqkl018m6wzdaxls7cszfv04alass"; depends=[Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph IRanges RBGL Rsamtools S4Vectors speedglm stringr SummarizedExperiment]; }; + alsace = derive2 { name="alsace"; version="1.14.0"; sha256="08jdjyjxc6r513zlk7nsrnydsg2fxsws77g1wq0gpcgwx8m7s697"; depends=[ALS ptw]; }; + altcdfenvs = derive2 { name="altcdfenvs"; version="2.40.0"; sha256="0fdy1yxgq9rnhgm17ml4wms56fsdmgr5hvqdjmpjslgwjn4922gk"; depends=[affy Biobase BiocGenerics Biostrings hypergraph makecdfenv S4Vectors]; }; + ampliQueso = derive2 { name="ampliQueso"; version="1.16.0"; sha256="1d3nyps5pa4s52mwnsqhlm4pddqanns003qggs2qidb5rcbvhd4m"; depends=[DESeq doParallel edgeR foreach genefilter ggplot2 gplots knitr rgl rnaSeqMap samr statmod VariantAnnotation xtable]; }; + amplican = derive2 { name="amplican"; version="1.0.0"; sha256="1lv0xvfk2spcl23hn005w7c4iyvsbrqgpvc5rbw6nkrxzmay5g16"; depends=[BiocGenerics BiocParallel Biostrings clusterCrit data_table dplyr GenomeInfoDb GenomicRanges ggbio ggplot2 ggthemes gridExtra gtable IRanges knitr Matrix matrixStats rmarkdown S4Vectors ShortRead stringr waffle]; }; + anamiR = derive2 { name="anamiR"; version="1.6.1"; sha256="0mxpxangzbvx7rpzm4ak321pcgj6pa0nbslgvh8rplyz4sf6v0z6"; depends=[agricolae DBI DESeq2 gage gplots limma lumi RMySQL S4Vectors SummarizedExperiment]; }; + annaffy = derive2 { name="annaffy"; version="1.50.0"; sha256="0qprkcvq56h6dwcylqsa0dq0nmv5bk280j89cwa3brm4jfncs4hm"; depends=[AnnotationDbi Biobase DBI GO_db KEGG_db]; }; + annmap = derive2 { name="annmap"; version="1.20.0"; sha256="0q4lcx1j5av5jpn2wmarn7z32clzzdaprvpcagnvv453i11vp5bi"; depends=[Biobase BiocGenerics DBI digest genefilter GenomicRanges IRanges lattice RMySQL Rsamtools]; }; + annotate = derive2 { name="annotate"; version="1.56.1"; sha256="14c5xd9kasvcwg5gbjys2c1vizxhlqlzxakqc2kml0kw97hmx0rq"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl XML xtable]; }; + annotationTools = derive2 { name="annotationTools"; version="1.52.0"; sha256="1kmhgasb26dbq10d4r8wig5pjlbiqcqsa12zpgcsasj8kvpr2gpd"; depends=[Biobase]; }; + annotatr = derive2 { name="annotatr"; version="1.4.1"; sha256="10izqb0x92fjpsycsyppvz6yidg8ssix452jfni692na7ih564y9"; depends=[AnnotationDbi AnnotationHub dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges org_Dm_eg_db org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db readr regioneR reshape2 rtracklayer S4Vectors TxDb_Dmelanogaster_UCSC_dm3_ensGene TxDb_Dmelanogaster_UCSC_dm6_ensGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene TxDb_Rnorvegicus_UCSC_rn4_ensGene TxDb_Rnorvegicus_UCSC_rn5_refGene TxDb_Rnorvegicus_UCSC_rn6_refGene]; }; + anota = derive2 { name="anota"; version="1.26.0"; sha256="1fvr9yvyf0m7m5dnfbzbm29kd1yqq78carv9v7xx60szi30w4lvq"; depends=[multtest qvalue]; }; + anota2seq = derive2 { name="anota2seq"; version="1.0.0"; sha256="1pcmjlnvx3g2209l54jcbw044k6iz9zch3l01d1vr1cxiqag8smh"; depends=[DESeq2 edgeR limma multtest qvalue RColorBrewer SummarizedExperiment]; }; + antiProfiles = derive2 { name="antiProfiles"; version="1.18.0"; sha256="03y6j3y0qvfzwbwzjgjsl5zlqayqj1400gj278m28l70l43ifnyg"; depends=[locfit matrixStats]; }; + apComplex = derive2 { name="apComplex"; version="2.44.0"; sha256="132j6gm70h8sma82jd566hrih7npa217h5r6kqx4lq5yw3dlqcs1"; depends=[graph org_Sc_sgd_db RBGL Rgraphviz]; }; + apeglm = derive2 { name="apeglm"; version="1.0.3"; sha256="06j68szmxdr9c8qmmlcx85rv1hjl2rk52lagack83cr3q1gd10bj"; depends=[emdbook GenomicRanges SummarizedExperiment]; }; + aroma_light = derive2 { name="aroma.light"; version="3.8.0"; sha256="0crnk6851jwypqr5l5jcbbay0vi5vvdjyisaf6z2d69c39wmr6sc"; depends=[matrixStats R_methodsS3 R_oo R_utils]; }; + arrayMvout = derive2 { name="arrayMvout"; version="1.36.0"; sha256="0z35dyc1r4hn8bfmym5yi08s8mi9vn50pn0vvmggphzm25cwyln9"; depends=[affy affyContam Biobase lumi mdqc parody simpleaffy]; }; + arrayQuality = derive2 { name="arrayQuality"; version="1.56.0"; sha256="14q0a9my42ya21615l46pllcw4dlnmqi8nac0m4iimlpjm0ic7w6"; depends=[gridBase hexbin limma marray RColorBrewer]; }; + arrayQualityMetrics = derive2 { name="arrayQualityMetrics"; version="3.34.0"; sha256="1rz3llx2ww5ngp7l2i1y4zxsjb8gsyhz1srs06s0asp49kq88qcv"; depends=[affy affyPLM beadarray Biobase Cairo genefilter gridSVG Hmisc hwriter lattice latticeExtra limma RColorBrewer setRNG vsn XML]; }; + attract = derive2 { name="attract"; version="1.30.0"; sha256="0af0jiscz7s3i8k6p7ygihb6fflhk57alqmn15b42bcn9a5d31l8"; depends=[AnnotationDbi Biobase cluster GOstats KEGGREST limma org_Hs_eg_db reactome_db]; }; + bacon = derive2 { name="bacon"; version="1.6.0"; sha256="1i6y1dfmnqv5n5nbhfmq4qvkivd88sfvlypsm4xs4jsb8ij0aq5y"; depends=[BiocParallel ellipse ggplot2]; }; + ballgown = derive2 { name="ballgown"; version="2.10.0"; sha256="10x49g1di4q134k1ialxb992lq3asg8qiib08a125la5yfwr179y"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges limma RColorBrewer rtracklayer S4Vectors sva]; }; + bamsignals = derive2 { name="bamsignals"; version="1.10.0"; sha256="15id6mkj95skb4kfafvfs2j7ylydal60c3pspcl7llhwpq6vcqvl"; depends=[BiocGenerics GenomicRanges IRanges Rcpp Rhtslib zlibbioc]; }; + banocc = derive2 { name="banocc"; version="1.2.0"; sha256="0cc1kx01mpn1gg5ym6lij77zf0canricj0lchvx1vq5as6qazrbh"; depends=[coda mvtnorm rstan stringr]; }; + basecallQC = derive2 { name="basecallQC"; version="1.2.0"; sha256="1kvknsz0s35r5zfc4gn08jzl914l54pbn92cwxbnay598zfg0shz"; depends=[data_table dplyr DT ggplot2 knitr lazyeval magrittr prettydoc raster rmarkdown ShortRead stringr tidyr XML yaml]; }; + baySeq = derive2 { name="baySeq"; version="2.12.0"; sha256="1d918rmbzqncr7jw6byr3xyqybvcsgcyf96immqcl1c5xvgmqn5z"; depends=[abind edgeR GenomicRanges]; }; + beachmat = derive2 { name="beachmat"; version="1.0.2"; sha256="0b6dzja5fbx4dawb7ixj67mlhw4fy62pfp20mfp918fy96zmdwqz"; depends=[DelayedArray HDF5Array Rcpp rhdf5 Rhdf5lib]; }; + beadarray = derive2 { name="beadarray"; version="2.28.0"; sha256="0azcqszgggcllwpib8vh9zkl393hikc2qfaq9izprpdrnsb5amqi"; depends=[AnnotationDbi BeadDataPackR Biobase BiocGenerics GenomicRanges ggplot2 illuminaio IRanges limma reshape2]; }; + beadarraySNP = derive2 { name="beadarraySNP"; version="1.44.0"; sha256="15lr0mavyhnl0vzq4ndw2da6wxsvwrrrmrj9dzj1h8ml305m5r7w"; depends=[Biobase quantsmooth]; }; + bgafun = derive2 { name="bgafun"; version="1.40.0"; sha256="1s3k333y7hxxkblkivi58gpxzd58divi01xv8sqdl2grvw0zj9d4"; depends=[ade4 made4 seqinr]; }; + bgx = derive2 { name="bgx"; version="1.44.0"; sha256="0nbf0nnsv75a3zcwnl82wvg7ysbw8zsjk3zd7s5g61ma710smq07"; depends=[affy Biobase gcrma]; }; + bigmelon = derive2 { name="bigmelon"; version="1.4.0"; sha256="1q8mp765bzj9bb9b25s2qn58z2iyy8956frwa0y8qz19hgg5iyvk"; depends=[Biobase gdsfmt GEOquery methylumi minfi wateRmelon]; }; + bigmemoryExtras = derive2 { name="bigmemoryExtras"; version="1.26.1"; sha256="17zic27wmdxxrfli0qmi0lggl1kspyk8nh02bbwkyv28ia6j3g9h"; depends=[bigmemory]; }; + bioCancer = derive2 { name="bioCancer"; version="1.6.0"; sha256="1k6ppqr6dpibfk0hf55zz3rd2vfprh9fzmd3wwahx87nd7qj8n6m"; depends=[AlgDesign AnnotationFuncs Biobase cgdsr clusterProfiler DiagrammeR DOSE dplyr DT geNetClassifier htmlwidgets org_Hs_eg_db plyr r_import radiant_data reactome_db ReactomePA shiny shinythemes tibble visNetwork XML]; }; + bioDist = derive2 { name="bioDist"; version="1.50.0"; sha256="02y8dlkgjjryy73d04yqyf2aifsrivf5xmcn7i06qfch2w9fbnn9"; depends=[Biobase KernSmooth]; }; + bioassayR = derive2 { name="bioassayR"; version="1.16.0"; sha256="1kzz10nzqgd3zjivnwnr6hwl2gsjvi14aslashvclcym1104vmxl"; depends=[BiocGenerics ChemmineR DBI Matrix rjson RSQLite XML]; }; + biobroom = derive2 { name="biobroom"; version="1.10.1"; sha256="095bkbqbd42bd6gnafwnahm9a9jg0cxa1ndnlx34v9yfwaxnjxk5"; depends=[Biobase broom dplyr tidyr]; }; + biocGraph = derive2 { name="biocGraph"; version="1.40.0"; sha256="11lfiwgwlxp1b1yip4n320v6a31yvc2iy3c6jcq5h50ylc8srdyi"; depends=[BiocGenerics geneplotter graph Rgraphviz]; }; + biocViews = derive2 { name="biocViews"; version="1.46.0"; sha256="09zyqj1kqc089lmh9sliy0acanx9zimcasvp71dsrg2bqm08r1md"; depends=[Biobase graph RBGL RCurl RUnit XML]; }; + biomaRt = derive2 { name="biomaRt"; version="2.34.2"; sha256="1zlgs2zg0lmnk572p55n7m34nkxka8w10x8f2ndssjkffl2csy79"; depends=[AnnotationDbi httr progress RCurl stringr XML]; }; + biomformat = derive2 { name="biomformat"; version="1.6.0"; sha256="0ss70nca7dadhjk0assrj6kqgwxrk9w7sxwynk2cmw8rn4kqiabs"; depends=[jsonlite Matrix plyr rhdf5]; }; + biomvRCNS = derive2 { name="biomvRCNS"; version="1.18.0"; sha256="05lh0np314zhwd9imwkxfch5mn46964m4ws151x9r51siz262bmb"; depends=[GenomicRanges Gviz IRanges mvtnorm]; }; + biosigner = derive2 { name="biosigner"; version="1.6.0"; sha256="0d6801vvw4778yjq0i5izgazm86h5v6xrfks4qrm3di0yh0nald9"; depends=[Biobase e1071 randomForest ropls]; }; + biosvd = derive2 { name="biosvd"; version="2.14.0"; sha256="0xp032z4c1ws0hh52s67hxv254d6hn4kz9ggrkfwyjq0yby3s0lb"; depends=[Biobase BiocGenerics NMF]; }; + biotmle = derive2 { name="biotmle"; version="1.3.0"; sha256="18012n55swz9grkpdkapklgzbxhqkxbrcc9nika3vvhfpwxi2n8l"; depends=[BiocParallel biotmleData DBI doFuture dplyr future ggplot2 limma magrittr Matrix SummarizedExperiment superheat SuperLearner tmle wesanderson]; }; + biovizBase = derive2 { name="biovizBase"; version="1.26.0"; sha256="14l4vhj0a4ssr9m9zdzz3qpd4qw1mhgq5bmxq7jhrq3j9kmd6i2f"; depends=[AnnotationDbi AnnotationFilter BiocGenerics Biostrings dichromat ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Hmisc IRanges RColorBrewer Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; }; + birta = derive2 { name="birta"; version="1.22.0"; sha256="1zwdgidcn82z5nnkzjr1p1z2vjl6bsajnisw7kz4w18br11rakwh"; depends=[Biobase limma MASS]; }; + birte = derive2 { name="birte"; version="1.14.0"; sha256="1qlw1a0fd35b68kykvy1x6sr583n7qn88nixddsmkb963xvkksgv"; depends=[Biobase glmnet limma MASS nem Rcpp RcppArmadillo]; }; + blima = derive2 { name="blima"; version="1.12.0"; sha256="00c3kfs9l9qr2wxj8h3a1x6bngkkz0i8axmmsh2k12jp5b3fk0sx"; depends=[beadarray Biobase BiocGenerics Rcpp]; }; + bnbc = derive2 { name="bnbc"; version="1.0.0"; sha256="1vy2331idwwlcx243nrx61bns0f9whn21yq25nxs4mn903qy0kyw"; depends=[BiocGenerics EBImage GenomeInfoDb GenomicRanges IRanges matrixStats preprocessCore Rcpp S4Vectors SummarizedExperiment sva]; }; + branchpointer = derive2 { name="branchpointer"; version="1.4.0"; sha256="07qjlrdhj2qs65911cmvrd8q9dq077nk00m6vpnwx1fx0n0js6kf"; depends=[biomaRt Biostrings BSgenome_Hsapiens_UCSC_hg38 caret cowplot data_table gbm GenomeInfoDb GenomicRanges ggplot2 IRanges kernlab plyr rtracklayer S4Vectors stringr]; }; + bridge = derive2 { name="bridge"; version="1.42.0"; sha256="0axck328cvwzhwlzi500l42x58k09c8zb84zq6hngpwnvlpcyyjk"; depends=[rama]; }; + bsseq = derive2 { name="bsseq"; version="1.14.0"; sha256="0j6nrb6syhdmyg9s7s8mbvfyagq7khxg7nwdi32w2hcdyp05hkr4"; depends=[Biobase BiocGenerics data_table DelayedArray GenomeInfoDb GenomicRanges gtools HDF5Array IRanges limma locfit matrixStats permute R_utils S4Vectors scales SummarizedExperiment]; }; + bumphunter = derive2 { name="bumphunter"; version="1.20.0"; sha256="0ag0h0xgja6fyind52hg5bcm482iv8rvwrnj7cfr0la1wndi2slh"; depends=[AnnotationDbi BiocGenerics doRNG foreach GenomeInfoDb GenomicFeatures GenomicRanges IRanges iterators limma locfit matrixStats S4Vectors]; }; + caOmicsV = derive2 { name="caOmicsV"; version="1.8.0"; sha256="158jb9665151fm8dm6xs4cxv65wa2h7bn5ixhwqaa893wrlqjnh3"; depends=[bc3net igraph]; }; + canceR = derive2 { name="canceR"; version="1.10.0"; sha256="0sgj40j9p6s14cmbp4gmlmqkjnfqigjilzbijlmfhcrg70ly3sqd"; depends=[Biobase cgdsr circlize Formula geNetClassifier GSEABase GSEAlm phenoTest plyr rpart RUnit survival tcltk2 tkrplot]; }; + cancerclass = derive2 { name="cancerclass"; version="1.22.0"; sha256="07pxb2fsp9b9wa39xdsd5rddw9j9v20ai4hmsmwvm7mi4yr2r5b2"; depends=[binom Biobase]; }; + casper = derive2 { name="casper"; version="2.12.0"; sha256="11xqxhjlgyk8pnlkscyc1prgvy707w5ls7n1bz1yjgqdg84nbv7m"; depends=[Biobase BiocGenerics coda EBarrays gaga GenomeInfoDb GenomicFeatures GenomicRanges gtools IRanges limma mgcv Rsamtools rtracklayer S4Vectors sqldf survival VGAM]; }; + categoryCompare = derive2 { name="categoryCompare"; version="1.22.0"; sha256="045xwg1h0jjbm4yd0f21c09ha91k6vzhrn3yqzzi4mhb07mpjczx"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category colorspace GOstats graph GSEABase hwriter RCy3]; }; + cbaf = derive2 { name="cbaf"; version="1.0.2"; sha256="0im83489xpbfppg9l46i6fv19ch41zccrf16gks2nyx64hrhllz3"; depends=[BiocFileCache cgdsr genefilter gplots RColorBrewer xlsx]; }; + ccmap = derive2 { name="ccmap"; version="1.4.0"; sha256="185bvhmh9806lqd694dcrfl3mhn4k75kwnidsqs8ncqnb865hy01"; depends=[AnnotationDbi BiocInstaller ccdata data_table doParallel foreach lsa xgboost]; }; + ccrepe = derive2 { name="ccrepe"; version="1.14.0"; sha256="0hpm9gcmc1pdd1rzg5l0jw1xswwqbaajkdnrvrdwbhcvl9jbk5yp"; depends=[infotheo]; }; + cellGrowth = derive2 { name="cellGrowth"; version="1.22.0"; sha256="04cq203ab8yz32pjgh3b8kg7bzljqyjlyqxnfxl9ygk686jj4skm"; depends=[lattice locfit]; }; + cellHTS2 = derive2 { name="cellHTS2"; version="2.42.0"; sha256="0c004givz5a0x7vxiqb6qz9a27qm53ggy6wwaaxplh9kzqjqszkx"; depends=[Biobase BiocGenerics Category genefilter GSEABase hwriter locfit prada RColorBrewer splots vsn]; }; + cellTree = derive2 { name="cellTree"; version="1.8.0"; sha256="1c5mla2kf14c3pc02v16nlnhqmr2dh66l2liirc9myr7mgiqzaa8"; depends=[gplots igraph maptpx slam topGO topicmodels xtable]; }; + cellbaseR = derive2 { name="cellbaseR"; version="1.2.0"; sha256="002af82q6blm65w8ig1sclp42mw6q6j3ag8vfv7zrxwxwxrsg9r3"; depends=[BiocParallel data_table doParallel foreach httr jsonlite pbapply R_utils Rsamtools tidyr]; }; + cellity = derive2 { name="cellity"; version="1.6.0"; sha256="0szsa9q1znj5avyr2i83ih7m5hfq53786l9lmyxgc80mpzskj95s"; depends=[AnnotationDbi e1071 ggplot2 mvoutlier org_Hs_eg_db org_Mm_eg_db robustbase topGO]; }; + cellscape = derive2 { name="cellscape"; version="1.2.0"; sha256="066lkswc296vvy0d3fdr2sp1s4s242jmnfj431vrqryvzv7678zm"; depends=[dplyr gtools htmlwidgets jsonlite plyr reshape2 stringr]; }; + cghMCR = derive2 { name="cghMCR"; version="1.36.0"; sha256="10c6cnm2qbg0gb3klfv1xlwhbzj9x6aimxg7jnz29fgnn3xnd8cs"; depends=[BiocGenerics CNTools DNAcopy limma]; }; + charm = derive2 { name="charm"; version="2.24.0"; sha256="0zr96pwq7zd45lffl67fxvzrxhmjk8pmh8rfawhc7mmazds2ip9a"; depends=[Biobase Biostrings BSgenome ff fields genefilter gtools IRanges limma nor1mix oligo oligoClasses preprocessCore RColorBrewer siggenes SQN sva]; }; + chimera = derive2 { name="chimera"; version="1.20.0"; sha256="0z50pwynvyx2gc619b7w6chwdb7pxs2gf1ywh9vp7vzghkdv0wx4"; depends=[AnnotationDbi Biobase BSgenome_Hsapiens_UCSC_hg19 GenomicAlignments GenomicRanges Homo_sapiens Rsamtools TxDb_Hsapiens_UCSC_hg19_knownGene]; }; + chimeraviz = derive2 { name="chimeraviz"; version="1.4.2"; sha256="1qqv2wzagq5kf4xijrvcm17bb1qgjjp2kx4fm2a8ky1rcwf50251"; depends=[AnnotationDbi AnnotationFilter ArgumentCheck BiocStyle Biostrings dplyr DT ensembldb GenomeInfoDb GenomicAlignments GenomicRanges graph Gviz IRanges org_Hs_eg_db plyr RCircos RColorBrewer readr Rgraphviz rmarkdown Rsamtools S4Vectors]; }; + chipenrich = derive2 { name="chipenrich"; version="2.2.0"; sha256="0q24il68grjqdxpy7qjk6lw6l5zlmw6yybrbrbb8l42gljyi6s74"; depends=[AnnotationDbi BiocGenerics chipenrich_data GenomeInfoDb GenomicRanges IRanges lattice latticeExtra mgcv org_Dm_eg_db org_Dr_eg_db org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db plyr rms rtracklayer S4Vectors stringr]; }; + chipseq = derive2 { name="chipseq"; version="1.28.0"; sha256="1ymcq77krwjzrkzzcw7i9909cmkqa7c0675z9wzvrrk81hgdssfq"; depends=[BiocGenerics GenomicRanges IRanges lattice S4Vectors ShortRead]; }; + chopsticks = derive2 { name="chopsticks"; version="1.42.0"; sha256="0awwk8k7vnsc0c1ic17m2mhmpin0s0ijd2gn7my9yysqzld9sncd"; depends=[survival]; }; + chroGPS = derive2 { name="chroGPS"; version="1.26.0"; sha256="1lx12mlrj1syl2qaibm08b4vq8h2xw609vr6vxynl1wvvf8wdarp"; depends=[Biobase changepoint cluster DPpackage GenomicRanges ICSNP MASS]; }; + chromDraw = derive2 { name="chromDraw"; version="2.8.0"; sha256="1lqrpbf322kxpx5068mw650ibzqksfmxc4j6q1fs4dv0ghpxdcsf"; depends=[GenomicRanges Rcpp]; }; + chromPlot = derive2 { name="chromPlot"; version="1.6.0"; sha256="16qy1zqwlxc2pdkdb1jf8rknvr5cz2k4vbg2jybr6ks73pzagb47"; depends=[biomaRt GenomicRanges]; }; + chromVAR = derive2 { name="chromVAR"; version="1.0.1"; sha256="0a62gp47ymspn9pbdz7j2vjpd0g7bhl333dicbs468qjjfpm8fbw"; depends=[BiocGenerics BiocParallel Biostrings BSgenome DT GenomeInfoDb GenomicRanges ggplot2 IRanges Matrix miniUI nabor plotly RColorBrewer Rcpp RcppArmadillo Rsamtools Rtsne S4Vectors shiny SummarizedExperiment TFBSTools]; }; + chromstaR = derive2 { name="chromstaR"; version="1.4.0"; sha256="1ky2z9v6gwwgzvd498ng9ac5s7x8nkgm5170gywr7bgw7lqrycjz"; depends=[bamsignals chromstaRData doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges mvtnorm reshape2 Rsamtools S4Vectors]; }; + chromswitch = derive2 { name="chromswitch"; version="1.0.0"; sha256="1ym7vdj6lfwi4nja38lixm3vsxp296dpb90zwnmabws3dhysxhfy"; depends=[Biobase BiocParallel cluster DescTools dplyr GenomicRanges gplots IRanges lazyeval magrittr matrixStats mclust NMF rtracklayer S4Vectors tidyr]; }; + cisPath = derive2 { name="cisPath"; version="1.18.0"; sha256="0ya1kkvghs23c4rqydkas68a7y6z16ihjnv8ljjy9h3i7pdani4h"; depends=[]; }; + cleanUpdTSeq = derive2 { name="cleanUpdTSeq"; version="1.16.0"; sha256="1r4iqnyrrjlx1crwy8ai7igkga3114nibqwj22kk364aqpr99jvv"; depends=[BiocGenerics BSgenome BSgenome_Drerio_UCSC_danRer7 e1071 GenomicRanges seqinr]; }; + cleaver = derive2 { name="cleaver"; version="1.16.0"; sha256="1zzlmq121xix1hqa0cr7swda15jj4p9b05k8fc3531c6znhfcscp"; depends=[Biostrings IRanges S4Vectors]; }; + clippda = derive2 { name="clippda"; version="1.28.0"; sha256="0bzbws6wzvqalhcf7m29fnn01iqyavdgmfrfhhdvhi77253pggqk"; depends=[Biobase lattice limma rgl scatterplot3d statmod]; }; + clipper = derive2 { name="clipper"; version="1.18.0"; sha256="0mwmqc274hdwsskjianbnyzjk755kqc2s0m91g7rim43hqddgw4a"; depends=[Biobase corpcor graph gRbase igraph KEGGgraph Matrix qpgraph RBGL Rcpp]; }; + clonotypeR = derive2 { name="clonotypeR"; version="1.16.0"; sha256="079qgnprgzir8k94kxhq7xvv9hjnwlb7xgagcs71fr0rci0163pb"; depends=[]; }; + clst = derive2 { name="clst"; version="1.26.0"; sha256="1h1dyd42k7m7r5gdf7ddf3c7v27k906xf6cv7nhvdf4d6nac73nw"; depends=[lattice ROC]; }; + clstutils = derive2 { name="clstutils"; version="1.26.0"; sha256="19p0ral4xnf3gq99a0b4fc33fpngjll3pgr6ds3kkk00ynrwc3g6"; depends=[ape clst lattice rjson RSQLite]; }; + clustComp = derive2 { name="clustComp"; version="1.6.0"; sha256="0gfddardn3ib4g2b70jk55hg09vjmwd182m013vnhl476896zpb3"; depends=[sm]; }; + clusterExperiment = derive2 { name="clusterExperiment"; version="1.4.0"; sha256="07mcwjjff86d0jmj70za7j4h7kvs9j34s0z46rk5ivp71nxfnn4w"; depends=[ape cluster dendextend howmany kernlab limma locfdr matrixStats NMF phylobase RColorBrewer RSpectra stringr SummarizedExperiment]; }; + clusterProfiler = derive2 { name="clusterProfiler"; version="3.6.0"; sha256="0667k479xc1c8b6gkhnki1z56pvp2v98r3ar4x5gbdv0kg9yby6s"; depends=[AnnotationDbi DOSE ggplot2 GO_db GOSemSim magrittr plyr qvalue rvcheck tidyr]; }; + clusterSeq = derive2 { name="clusterSeq"; version="1.2.0"; sha256="1akcknsn89cllfjpb09nr8b3aalfp7bhyd57cs5i327hdjwlbgna"; depends=[baySeq BiocGenerics BiocParallel]; }; + clusterStab = derive2 { name="clusterStab"; version="1.50.0"; sha256="0rrzxq8gcxk828lx5kmicrd1qk5xfj0nlzs5233a0x9az5xhrj38"; depends=[Biobase]; }; + cn_farms = derive2 { name="cn.farms"; version="1.26.0"; sha256="001nynrmi568vv82b83jlc9wys8bj5qa6xljj777wdpc48f8swjg"; depends=[affxparser Biobase DBI DNAcopy ff lattice oligo oligoClasses preprocessCore snow]; }; + cn_mops = derive2 { name="cn.mops"; version="1.24.0"; sha256="157355f5x3wv8p1kdn527yyvgh2zs9rc733f0rldxc9fabrsk4lz"; depends=[Biobase BiocGenerics exomeCopy GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; }; + cnvGSA = derive2 { name="cnvGSA"; version="1.22.0"; sha256="0j7xhag1w64kzsmgpl5sz4grqcwffp84azhbx1gy3p83syxh8j4q"; depends=[brglm doParallel foreach GenomicRanges splitstackshape]; }; + coGPS = derive2 { name="coGPS"; version="1.22.0"; sha256="0h4x9fa3glkrdakwyvzm07zx9w4cp1zrlxz8zhkq9k4j5n2n71c5"; depends=[]; }; + coMET = derive2 { name="coMET"; version="1.10.2"; sha256="0ni5vsf1rwz52cmmh7p0kdjgyq295dyh1cyj1jj7jh8i44cghws3"; depends=[biomaRt colortools corrplot GenomicRanges ggbio ggplot2 gridExtra Gviz hash IRanges psych rtracklayer S4Vectors trackViewer]; }; + coRNAi = derive2 { name="coRNAi"; version="1.25.2"; sha256="0npwxyy3bh8wz8zz94fz76aiiffg4l4lxhnjkz9nsgdn6r8n1ykk"; depends=[cellHTS2 gplots lattice limma locfit MASS]; }; + cobindR = derive2 { name="cobindR"; version="1.16.0"; sha256="06r6wz7kpymdvghinimf2in0sxryyn3lmvdr6cmsnbc5pbzq4brs"; depends=[BiocGenerics biomaRt Biostrings BSgenome gmp gplots IRanges mclust rtfbs seqinr yaml]; }; + codelink = derive2 { name="codelink"; version="1.46.0"; sha256="0j4k5b1bhif0rqqwv5kmqmc9rrgsvs659accimlp1n797raw78ds"; depends=[annotate Biobase BiocGenerics limma]; }; + coexnet = derive2 { name="coexnet"; version="1.0.0"; sha256="12k0pkl4h410dhig9lpvpsbdhlsi5xbcqr981v7298dh7z4rxz4h"; depends=[acde affy Biobase GEOquery igraph limma minet rmarkdown siggenes STRINGdb SummarizedExperiment vsn]; }; + cogena = derive2 { name="cogena"; version="1.12.0"; sha256="1ngkr5qbjpxi90jfv8nnap11s2vy4wfpd1hiimcn1sf78i3kvpcg"; depends=[amap apcluster Biobase biwt class cluster corrplot devtools doParallel dplyr fastcluster foreach ggplot2 gplots kohonen mclust reshape2]; }; + compEpiTools = derive2 { name="compEpiTools"; version="1.12.0"; sha256="0mg02j9z55xq0vwy87kcbv100br88m3bxsbdvrlff46k6gdzj55g"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges GO_db gplots IRanges methylPipe Rsamtools S4Vectors topGO XVector]; }; + compcodeR = derive2 { name="compcodeR"; version="1.14.0"; sha256="09q0vk6fb56vf5bnd2jh3c896pr4fihr5ib05ih8f7db052dxbf4"; depends=[caTools edgeR gdata ggplot2 gplots gtools KernSmooth knitr lattice limma markdown MASS modeest ROCR sm stringr vioplot]; }; + consensusOV = derive2 { name="consensusOV"; version="1.0.0"; sha256="0pzb232b5jq9rzy5gk6cf114hid04jdwaqvrn5rzazr1fabrlg5y"; depends=[Biobase gdata genefu GSVA limma matrixStats randomForest]; }; + consensusSeekeR = derive2 { name="consensusSeekeR"; version="1.6.0"; sha256="1565azz566mbc1yvraingqx42830775i21vp74xn9ldaqywaqizd"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges IRanges rtracklayer S4Vectors stringr]; }; + contiBAIT = derive2 { name="contiBAIT"; version="1.6.0"; sha256="0by6qdmj4hs0mdjh4fia57m6ds50g2xaf5k8wc06w9ws47ryrqcs"; depends=[BH BiocParallel clue cluster colorspace diagram DNAcopy exomeCopy GenomicAlignments GenomicFiles GenomicRanges ggplot2 gplots gtools IRanges Rcpp reshape2 Rsamtools rtracklayer S4Vectors TSP]; }; + conumee = derive2 { name="conumee"; version="1.12.0"; sha256="12pa1zf4v3kkpq1k34x45d1nakm3afh9rsc8byz53j3w97wdwpy4"; depends=[DNAcopy GenomeInfoDb GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest IRanges minfi rtracklayer]; }; + convert = derive2 { name="convert"; version="1.54.0"; sha256="0h74byyd87kd3hr902y4n93lvrq07p8iwkzcmj9m4pbpnmlpahi4"; depends=[Biobase limma marray]; }; + copa = derive2 { name="copa"; version="1.46.0"; sha256="0aamwvm0qq4dsr14glzlnhqx90ljh820rgh5r4gppww5q040dw75"; depends=[Biobase]; }; + copynumber = derive2 { name="copynumber"; version="1.18.0"; sha256="01kcwzl485yjrkgyg8117b1il957ss0v6rq4bbxf4ksd5fzcjmyx"; depends=[BiocGenerics GenomicRanges IRanges S4Vectors]; }; + coseq = derive2 { name="coseq"; version="1.2.0"; sha256="1jw6xmw32q6jdy8ypircd5q9grllh9bsgq0ga6n4a9qbv23syd9p"; depends=[BiocParallel capushe compositions corrplot DESeq2 e1071 edgeR ggplot2 gridExtra HTSCluster HTSFilter mvtnorm Rmixmod S4Vectors scales SummarizedExperiment]; }; + cosmiq = derive2 { name="cosmiq"; version="1.12.0"; sha256="1g51zbi73hmc2nacai46if123kxlc1wdax0nq9ixipmyrqby74xm"; depends=[faahKO MassSpecWavelet pracma Rcpp xcms]; }; + covEB = derive2 { name="covEB"; version="1.4.0"; sha256="0wgimjzzysms0ccpaay36w5ad9pw1ip8imb2hxv4a86913agk1xv"; depends=[Biobase gsl igraph LaplacesDemon Matrix mvtnorm]; }; + covRNA = derive2 { name="covRNA"; version="1.4.0"; sha256="0813fb4yr4ya5rp1lx2av7c6svpsdp7m6aq8rddxp9qbrcqpjz7v"; depends=[ade4 Biobase genefilter]; }; + cpvSNP = derive2 { name="cpvSNP"; version="1.10.0"; sha256="1akyp9fdyi6sa9sf1c8rw43alvfx3dkdhqp1mifd6dz6q6030wd8"; depends=[BiocParallel corpcor GenomicFeatures ggplot2 GSEABase plyr]; }; + cqn = derive2 { name="cqn"; version="1.24.0"; sha256="1iw4a3f3hysbhgilv424yvglq0rj9vyryd0riq0ifzmg9dhim11n"; depends=[mclust nor1mix preprocessCore quantreg]; }; + crisprseekplus = derive2 { name="crisprseekplus"; version="1.4.1"; sha256="1n9rl417pqlvcwlmbafw9gbjanxi9dynkcwb3zx8nak6mgy24y5c"; depends=[AnnotationDbi BiocInstaller BSgenome CRISPRseek DT GenomicFeatures GenomicRanges GUIDEseq hash shiny shinyjs]; }; + crlmm = derive2 { name="crlmm"; version="1.36.0"; sha256="0i9094kkvxkg3djqvyv2sqfmpvyl5hlcwscas2pmkz6vn2ld1f9s"; depends=[affyio beanplot Biobase BiocGenerics ellipse ff foreach illuminaio lattice limma matrixStats mvtnorm oligoClasses preprocessCore RcppEigen SNPchip VGAM]; }; + crossmeta = derive2 { name="crossmeta"; version="1.4.0"; sha256="08pj8jnrrpmrq11ljj0szrw985qhgnj42kawah1jg1siry3l2pqb"; depends=[affxparser affy AnnotationDbi Biobase BiocGenerics BiocInstaller ccmap data_table doParallel doRNG DT fdrtool foreach GEOquery ggplot2 limma matrixStats metaMA metap miniUI oligo pander plotly RColorBrewer rdrop2 reshape shiny stringr sva]; }; + csaw = derive2 { name="csaw"; version="1.12.0"; sha256="0jw4dncqwf35fg6sf2syj9pwm9wrm0yc9wgichjwrh11ya9zfk49"; depends=[AnnotationDbi BiocGenerics BiocParallel edgeR GenomeInfoDb GenomicFeatures GenomicRanges IRanges limma Rcpp Rhtslib Rsamtools S4Vectors SummarizedExperiment zlibbioc]; }; + ctc = derive2 { name="ctc"; version="1.52.0"; sha256="0brqh8m0yj7i3794mmrh3bi2mkbhzpg52j7h8qiqyjh7y2l1i3kg"; depends=[amap]; }; + ctsGE = derive2 { name="ctsGE"; version="1.4.0"; sha256="1hxgh559lqa2f80p73mcyz8k6l20hykyk7rmyhi7j9wa21y2mzwv"; depends=[ccaPP ggplot2 limma reshape2 shiny stringr]; }; + cummeRbund = derive2 { name="cummeRbund"; version="2.20.0"; sha256="01v920fps6snqpn7gaairq1y76zfjcdya6j9pb9mfw2hkm8gad40"; depends=[Biobase BiocGenerics fastcluster ggplot2 Gviz plyr reshape2 RSQLite rtracklayer S4Vectors]; }; + customProDB = derive2 { name="customProDB"; version="1.18.0"; sha256="0n7rjhvaqcg19qb40i4pwfqv62xzc8gj1y4v0qd9kyff1kh7dkxz"; depends=[AhoCorasickTrie AnnotationDbi biomaRt Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges plyr RCurl Rsamtools RSQLite rtracklayer S4Vectors stringr VariantAnnotation]; }; + cycle = derive2 { name="cycle"; version="1.32.0"; sha256="03c3vr0mk5wyb77x3ypxqsaz2x16l9hasnakx3zbf6z8qrx92nss"; depends=[Biobase Mfuzz]; }; + cydar = derive2 { name="cydar"; version="1.2.1"; sha256="0pxnq8g649ki4697xzydfvqyanzfxjzlcf8lbsnyx46fzqy39zwk"; depends=[Biobase BiocParallel flowCore Rcpp S4Vectors shiny SummarizedExperiment viridis]; }; + cytofkit = derive2 { name="cytofkit"; version="1.10.0"; sha256="08lrnin6jpyjjgkmw2d71zvrsv0al10g28cqjcwwn9m6ax3nkf79"; depends=[Biobase colourpicker destiny doParallel e1071 flowCore FlowSOM ggplot2 ggrepel gplots igraph pdist plyr RANN Rcpp reshape2 Rtsne shiny shinyFiles vegan VGAM]; }; + cytolib = derive2 { name="cytolib"; version="1.0.1"; sha256="1yyrh5f67qslqsi3pqrw9ffz31sglp7jj5m83mhsjlpk4w20fv7i"; depends=[BH RProtoBufLib]; }; + dSimer = derive2 { name="dSimer"; version="1.4.0"; sha256="1rgmdc4q8vwdph1szzd3gzcdc53pr1w037yc19vgqm16ip2ryhff"; depends=[AnnotationDbi ggplot2 GO_db igraph org_Hs_eg_db Rcpp reshape2]; }; + daMA = derive2 { name="daMA"; version="1.50.0"; sha256="1hqqm4x8w65xv0kdqh14a0mh24p71k934rh8c70bi025rxn3pq76"; depends=[MASS]; }; + dada2 = derive2 { name="dada2"; version="1.6.0"; sha256="0lcfwh26cy1fpjxq2i5jb60rs4s0jnv8l9cxijqaakbs3xhmzdkr"; depends=[Biostrings data_table ggplot2 Rcpp RcppParallel reshape2 ShortRead]; }; + dagLogo = derive2 { name="dagLogo"; version="1.16.1"; sha256="1bvqpx0bxp4b0vzjf8zhbxphqpf4sggjn10d27pd462qpfg1wkaj"; depends=[biomaRt Biostrings grImport motifStack pheatmap]; }; + dcGSA = derive2 { name="dcGSA"; version="1.6.0"; sha256="1xi3hx06bd376cfyclpk7crxa8crwkxk276vcssr681w0fhnrk06"; depends=[BiocParallel Matrix]; }; + ddCt = derive2 { name="ddCt"; version="1.34.0"; sha256="0h6s2x9xa5mnvp653pv0qsk3yq7pdvdiqz0321q08hz7ai0r7vdd"; depends=[Biobase BiocGenerics lattice RColorBrewer xtable]; }; + ddgraph = derive2 { name="ddgraph"; version="1.21.0"; sha256="09m60a85cyjx4hjxqvp9qz1y2jkqwpafxy95l80xmqygal5d4jc4"; depends=[bnlearn graph gtools MASS pcalg plotrix RColorBrewer Rcpp]; }; + debrowser = derive2 { name="debrowser"; version="1.6.8"; sha256="11ra9rppy6japi10xy523g7a72cj2zkjb9c9581wy4wrw2kym2rj"; depends=[annotate AnnotationDbi baySeq clusterProfiler d3heatmap DESeq2 DOSE DT edgeR GenomicRanges ggplot2 ggvis googleAuthR gplots igraph IRanges jsonlite limma org_Hs_eg_db org_Mm_eg_db pathview RColorBrewer RCurl reshape2 S4Vectors shiny shinyBS shinydashboard shinyjs stringi SummarizedExperiment sva V8]; }; + deepSNV = derive2 { name="deepSNV"; version="1.24.0"; sha256="16k8wv495fx5qq1xnv4da9bbkp90jbqklry2zynz1fmfhfxcdmvn"; depends=[Biostrings GenomicRanges IRanges Rhtslib SummarizedExperiment VariantAnnotation VGAM]; }; + deltaGseg = derive2 { name="deltaGseg"; version="1.18.0"; sha256="1bmm83n8sw16492nzhbh585crzrrwajcfbm2yr8kgbnnv370x3rj"; depends=[changepoint fBasics ggplot2 pvclust reshape scales tseries wavethresh]; }; + derfinder = derive2 { name="derfinder"; version="1.12.6"; sha256="1bp8qw3m5crncwz586b4f4w1x0kcm6r39md3w8il2d9xlvjvmml0"; depends=[AnnotationDbi BiocParallel bumphunter derfinderHelper GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges Hmisc IRanges qvalue Rsamtools rtracklayer S4Vectors]; }; + derfinderHelper = derive2 { name="derfinderHelper"; version="1.12.0"; sha256="06aj2h98vm27pc1laxi7pjxhwxm756scl2r9d8f1x1gsg2aa0k1b"; depends=[IRanges Matrix S4Vectors]; }; + derfinderPlot = derive2 { name="derfinderPlot"; version="1.12.3"; sha256="1p0pqy2rdd4lmz91gyxwcm1gpnyb89qzy9j9fsm1jy84iaanan40"; depends=[derfinder GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 IRanges limma plyr RColorBrewer reshape2 S4Vectors scales]; }; + destiny = derive2 { name="destiny"; version="2.6.1"; sha256="1gyjh9lgqql67zsm4zz4lg77kdw5wbgkl9mraaww1aich167aqfl"; depends=[Biobase BiocGenerics ggplot2 Hmisc igraph Matrix proxy Rcpp RcppEigen scales scatterplot3d smoother VIM]; }; + dexus = derive2 { name="dexus"; version="1.18.0"; sha256="1l9x51w1q58zvh53slcmw8rbb2v1sii380acap1frp4idi56wmig"; depends=[BiocGenerics]; }; + diffGeneAnalysis = derive2 { name="diffGeneAnalysis"; version="1.60.0"; sha256="0bfs3n9crca46q0cgkpknl4xf5vc4dr5anly9kn77prb1zp9b0p3"; depends=[minpack_lm]; }; + diffHic = derive2 { name="diffHic"; version="1.10.0"; sha256="0j7vmgpxakzk3gazdy06xhpcqnb19pib0jxfz67nc7fgkyrmhzqi"; depends=[BiocGenerics Biostrings BSgenome csaw edgeR GenomeInfoDb GenomicRanges InteractionSet IRanges limma locfit Rcpp rhdf5 Rhtslib Rsamtools S4Vectors SummarizedExperiment zlibbioc]; }; + diffloop = derive2 { name="diffloop"; version="1.6.0"; sha256="0gv6wimcdfnbzqi0d5j8af6siqcqgaa7asmkz2nr6lvcicp3b6nc"; depends=[Biobase biomaRt data_table dplyr edgeR foreach GenomeInfoDb GenomicRanges ggplot2 IRanges limma locfit matrixStats pbapply plyr readr reshape2 rtracklayer S4Vectors statmod Sushi]; }; + diffuStats = derive2 { name="diffuStats"; version="0.102.0"; sha256="08dhygy58rr7zb8r2vrrxfdrdcyzdjwmafz0q0y65ay4zxn2s4w0"; depends=[expm igraph MASS Matrix plyr precrec Rcpp RcppArmadillo RcppParallel]; }; + diggit = derive2 { name="diggit"; version="1.10.0"; sha256="06swg9sz8csim6nq5cdpx9aqzsrfi1yhid4yb61ivyxf9p5hl1rn"; depends=[Biobase ks viper]; }; + discordant = derive2 { name="discordant"; version="1.2.0"; sha256="105lwz17r2vjzd9qz869p8qrjabac418nj6hxx8n8dxbykgyxihq"; depends=[Biobase biwt gtools MASS]; }; + dks = derive2 { name="dks"; version="1.24.0"; sha256="1fd4lyzfgf8iz3aqgayvvf2n166aq1hl57b6syfwazi42xfjxlhk"; depends=[cubature]; }; + domainsignatures = derive2 { name="domainsignatures"; version="1.38.0"; sha256="19c8n4xrwh9f46a5b41g7rp9h1inf9yjw0kr9ihd70gspbizx0h3"; depends=[AnnotationDbi biomaRt KEGG_db prada]; }; + doppelgangR = derive2 { name="doppelgangR"; version="1.6.0"; sha256="0hk01sayqnqidx768kgassdpqfavckbksgd40qf4jn9xaxq5a18f"; depends=[Biobase BiocParallel digest impute mnormt sva]; }; + dualKS = derive2 { name="dualKS"; version="1.38.0"; sha256="007h6bnm01h75gxzwxg8jwzzpsfa69b8wzf5ds3grnsx8c7rm9rv"; depends=[affy Biobase]; }; + dupRadar = derive2 { name="dupRadar"; version="1.8.0"; sha256="17b00ddsdnmhlba5rfylaxs3i5hfm6h959n6mmch4j02iy10bdpn"; depends=[Rsubread]; }; + dyebias = derive2 { name="dyebias"; version="1.38.0"; sha256="18mliq9ja1mdl18m0ys52fri1pjw6bj9zx3s3mc623kiki5zc4jk"; depends=[Biobase marray]; }; + easyRNASeq = derive2 { name="easyRNASeq"; version="2.14.0"; sha256="11l0bj9wcp5k0a5nq0adn4w891cllfdn7qrqg76k7klx5h0p37bx"; depends=[Biobase BiocGenerics BiocParallel biomaRt Biostrings DESeq edgeR GenomeInfoDb genomeIntervals GenomicAlignments GenomicRanges IRanges locfit LSD Rsamtools S4Vectors ShortRead SummarizedExperiment]; }; + ecolitk = derive2 { name="ecolitk"; version="1.50.0"; sha256="0xagah7nrj6dghl2ib75l8wlwj7kzdssnlbpjdwhm67nsys3hvx4"; depends=[Biobase]; }; + edge = derive2 { name="edge"; version="2.10.0"; sha256="1knr03yiw0cq0kj9hklmkaap4qiphm2ph51bjn1m5cn7nyckramz"; depends=[Biobase jackstraw MASS qvalue snm sva]; }; + edgeR = derive2 { name="edgeR"; version="3.20.8"; sha256="0g7bj6w61blw3m22hw9rc01n554k9qkjizh7njr3j4shmhads58d"; depends=[limma locfit Rcpp]; }; + eegc = derive2 { name="eegc"; version="1.4.0"; sha256="1v3586qddx1l74ha083x36m3lqdblrhmwd63k22jzfpkh30adz09"; depends=[AnnotationDbi clusterProfiler DESeq2 DOSE edgeR ggplot2 gplots igraph limma org_Hs_eg_db org_Mm_eg_db pheatmap R_utils S4Vectors sna wordcloud]; }; + eiR = derive2 { name="eiR"; version="1.18.0"; sha256="1ypd7yq9c6mqp7nm984dm60qzvwy4qb81zrp2mvp7g87c5vdj2a3"; depends=[BiocGenerics ChemmineR DBI digest gespeR RcppAnnoy RCurl RUnit snow snowfall]; }; + eisa = derive2 { name="eisa"; version="1.30.0"; sha256="11ydmv5kddq75sknbax1aiyxq60rx146qa7pd3m09axjzvk83mq5"; depends=[AnnotationDbi Biobase BiocGenerics Category DBI genefilter isa2]; }; + ensemblVEP = derive2 { name="ensemblVEP"; version="1.20.0"; sha256="1xza76fyqp8xikc98ipamsz6175nirdv7aisfvkb9nmzba4q0r62"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges S4Vectors SummarizedExperiment VariantAnnotation]; }; + ensembldb = derive2 { name="ensembldb"; version="2.2.2"; sha256="1yngndkf3588z91z0a2fvkg423p26ajm6xv1p27x0l9mzhhaqq3k"; depends=[AnnotationDbi AnnotationFilter AnnotationHub Biobase BiocGenerics Biostrings curl DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges ProtGenerics Rsamtools RSQLite rtracklayer S4Vectors]; }; + epiNEM = derive2 { name="epiNEM"; version="1.2.0"; sha256="0d3r4m0q3w2ljf4bm03z1dpiiih9cshzpbi4nnqq3jwls82f7nlq"; depends=[BoolNet e1071 graph gtools igraph lattice latticeExtra minet nem pcalg RColorBrewer]; }; + epigenomix = derive2 { name="epigenomix"; version="1.18.0"; sha256="0x567fxak38ngy5hs3x567381aigh1x1fb8ww8xvmpf2wlzrlfwp"; depends=[beadarray Biobase BiocGenerics GenomeInfoDb GenomicRanges IRanges MCMCpack Rsamtools S4Vectors SummarizedExperiment]; }; + epivizr = derive2 { name="epivizr"; version="2.8.0"; sha256="088f28jscw2w5p06jhp2qxjfpwscrf0kbq5lnlnmmshc1ghbmdvw"; depends=[epivizrData epivizrServer GenomicRanges IRanges S4Vectors]; }; + epivizrChart = derive2 { name="epivizrChart"; version="1.0.0"; sha256="1xgqv1gqb8fksp43313fsmgb73h8z568s28zd039a7d7v4pi0n0v"; depends=[epivizrData epivizrServer htmltools rjson]; }; + epivizrData = derive2 { name="epivizrData"; version="1.6.0"; sha256="101ibx9nq17dnn5j8kjy31pm8ly4nyzs1rrlbsvk0140avjhz154"; depends=[Biobase ensembldb epivizrServer GenomeInfoDb GenomicFeatures GenomicRanges IRanges OrganismDbi S4Vectors SummarizedExperiment]; }; + epivizrServer = derive2 { name="epivizrServer"; version="1.6.0"; sha256="0qa13yvq9ywa3m1n2vmi60087cgg18rpnqbr1m7f137ivnxyb11b"; depends=[httpuv mime R6 rjson]; }; + epivizrStandalone = derive2 { name="epivizrStandalone"; version="1.6.0"; sha256="0rbd2kmdi0y97mx72gkg93s97slfig1k1bgcv5maknsqqqcwzz8j"; depends=[BiocGenerics epivizr epivizrServer GenomeInfoDb GenomicFeatures git2r S4Vectors]; }; + erccdashboard = derive2 { name="erccdashboard"; version="1.12.0"; sha256="07dc80l8618rlv3sywr0gp9i49kq66i9glx3md2r0k5c4l67mw37"; depends=[edgeR ggplot2 gplots gridExtra gtools limma locfit MASS plyr qvalue reshape2 ROCR scales stringr]; }; + erma = derive2 { name="erma"; version="0.10.0"; sha256="0gcfs9g8vvdv5vmq9b21kd8sq5mizjj49nfzd4in9zvp4b9v7x1g"; depends=[AnnotationDbi Biobase BiocGenerics foreach GenomicFiles GenomicRanges ggplot2 Homo_sapiens rtracklayer S4Vectors shiny SummarizedExperiment]; }; + esATAC = derive2 { name="esATAC"; version="1.0.19"; sha256="1ikihh939c8iqm9w582s0kjmnh7yqgnj3dq8y8vfvpbill4f2zyd"; depends=[AnnotationDbi BiocGenerics BiocInstaller Biostrings BSgenome ChIPseeker clusterProfiler corrplot DiagrammeR digest GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 igraph IRanges JASPAR2016 knitr magrittr R_utils Rbowtie2 Rcpp rJava rmarkdown Rsamtools rtracklayer S4Vectors ShortRead TFBSTools VennDiagram]; }; + esetVis = derive2 { name="esetVis"; version="1.4.0"; sha256="1yb238lxy8sqmxim3zd25rp642cpz8p25vdffjlija2wivq8phn1"; depends=[Biobase hexbin MASS MLP mpm Rtsne]; }; + eudysbiome = derive2 { name="eudysbiome"; version="1.8.0"; sha256="13ayrigzy55h6an3am9f77r6mzcvyfcpxpby71xilhaf6mjhyj39"; depends=[Biostrings plyr R_utils Rsamtools]; }; + exomeCopy = derive2 { name="exomeCopy"; version="1.24.0"; sha256="17rpa7mck2rrivrv5vqk4abb094v79v8dbzh6n5dj4hnw53b9wif"; depends=[GenomeInfoDb GenomicRanges IRanges Rsamtools]; }; + exomePeak = derive2 { name="exomePeak"; version="2.13.2"; sha256="01fz3icmwq0zblvl070vmhr6fm0nxgzrvyl5xr68sv234by2nml7"; depends=[GenomicAlignments GenomicFeatures Rsamtools rtracklayer]; }; + explorase = derive2 { name="explorase"; version="1.42.0"; sha256="1xqilix4fn603p0lqrdgl6npc5j0fcy8rcc37clzl3sm4mfklhdd"; depends=[limma rggobi RGtk2]; }; + fCCAC = derive2 { name="fCCAC"; version="1.4.0"; sha256="0fnjh0h4hn9qzz9f3hc09piwiizsf5ljz82k8f30c81d65bhx6qj"; depends=[ComplexHeatmap fda genomation GenomicRanges ggplot2 IRanges RColorBrewer S4Vectors]; }; + fCI = derive2 { name="fCI"; version="1.8.0"; sha256="0p85pya1k37qjnvbjqg96ydip7dd1xkw9zxj35fyw3hxsbrd0d7g"; depends=[FNN gtools psych rgl VennDiagram zoo]; }; + fabia = derive2 { name="fabia"; version="2.24.0"; sha256="1c4kfn2gdwg72ypyfvsqbgk2pl4qqhr6pjnzd7xla9w1whlkag07"; depends=[Biobase]; }; + facopy = derive2 { name="facopy"; version="1.12.0"; sha256="1m3sj06p9inl3p1aslj7ybx7hrc6zm9zxb2bdvxwyn1wwlgkcx35"; depends=[annotate cgdsr coin data_table DOSE facopy_annot FactoMineR ggplot2 GO_db GOstats graphite gridExtra igraph IRanges MASS nnet reshape2 Rgraphviz S4Vectors scales]; }; + factDesign = derive2 { name="factDesign"; version="1.54.0"; sha256="1hpdf64ghfnpb2rd6qmha8yh5vy2gcnh8jk1pgj951k5vcxrx9zc"; depends=[Biobase]; }; + farms = derive2 { name="farms"; version="1.30.0"; sha256="0k5nygacdj38qw828xn417ahbsanf074r5pknl34l66f4vggpkv2"; depends=[affy Biobase MASS]; }; + fastLiquidAssociation = derive2 { name="fastLiquidAssociation"; version="1.14.0"; sha256="05cyryfbkww757y15wg08iblm1vv3sfgkb54kfviyc5lg8r789kr"; depends=[doParallel Hmisc impute LiquidAssociation preprocessCore WGCNA]; }; + fastseg = derive2 { name="fastseg"; version="1.24.0"; sha256="0dd7nr3klwz9ailwshnbynhd62lwb8zbbpj6jf3igpb94yi6x2jp"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors]; }; + fdrame = derive2 { name="fdrame"; version="1.50.0"; sha256="1nnaibcxkfr6nzw7vm5ihhbzzcvvg2y9r65msy02k1x5gwd6ca43"; depends=[]; }; + ffpe = derive2 { name="ffpe"; version="1.22.0"; sha256="0c0l1wb4ydxz6rddvg0bv9j75dv892mm452imm3lh7s5q0gq6004"; depends=[affy Biobase BiocGenerics lumi methylumi sfsmisc TTR]; }; + fgsea = derive2 { name="fgsea"; version="1.4.1"; sha256="187c8xckx0s1p19i85nsiapgb3mppjqxp7zyld5hqyjvw3zcdj50"; depends=[BiocParallel data_table fastmatch ggplot2 gridExtra Rcpp]; }; + flagme = derive2 { name="flagme"; version="1.34.0"; sha256="15rbh6v22mjg9ms6kkl7z056k3bm117klw16hl69mjpd3crcs1by"; depends=[CAMERA gcspikelite gplots MASS SparseM xcms]; }; + flipflop = derive2 { name="flipflop"; version="1.16.0"; sha256="1fwvffjgf45plchwkcmfi298y2nf4ynd7dxrb2xlcw4gzx6b3ghs"; depends=[GenomicRanges IRanges Matrix]; }; + flowAI = derive2 { name="flowAI"; version="1.6.3"; sha256="1xczc62ifjq4zr5xyjhf96rp8anzw2sfg0jmgplzs0na05d4601g"; depends=[changepoint flowCore ggplot2 knitr plyr RColorBrewer reshape2 scales]; }; + flowBeads = derive2 { name="flowBeads"; version="1.16.0"; sha256="06jcflmdbm9f8zjh2vxbi093v16hqyi5q0c0fmvg59384p9z0315"; depends=[Biobase flowCore knitr rrcov xtable]; }; + flowBin = derive2 { name="flowBin"; version="1.14.0"; sha256="1svbph6drm4lb5k8l8x2sjl4bfanyrjy1f5nky7rrgqb00hhdq5h"; depends=[BiocGenerics class flowCore flowFP limma snow]; }; + flowCHIC = derive2 { name="flowCHIC"; version="1.12.0"; sha256="12yl4jwxy6mz047yqvzwkvp1yy4d323flzmpgfpv6v3pvz7x82lq"; depends=[EBImage flowCore ggplot2 hexbin vegan]; }; + flowCL = derive2 { name="flowCL"; version="1.16.2"; sha256="1zaic9cf7xw4qmdcrhi9a9zcxvxlnn9iii0a6lnwwkpsspgn1bnj"; depends=[graph Rgraphviz SPARQL]; }; + flowClean = derive2 { name="flowClean"; version="1.16.0"; sha256="1crpgaw1bilvgcyr93c2qx6jbx18ca52dzr6r8cqznlfxdnz48jj"; depends=[bit changepoint flowCore sfsmisc]; }; + flowClust = derive2 { name="flowClust"; version="3.16.0"; sha256="1c8ppgy4i42l250m71ri3gbw8mw1yw2saplx9wrhnykvwxnsx210"; depends=[Biobase BiocGenerics clue ellipse flowCore flowViz graph MCMCpack mnormt RBGL]; }; + flowCore = derive2 { name="flowCore"; version="1.44.1"; sha256="1ain06wjny8f5khpf6cmz683rzq1jfidk4p3mz1v5ybw54dxvl7z"; depends=[BH Biobase BiocGenerics corpcor graph matrixStats Rcpp rrcov]; }; + flowCyBar = derive2 { name="flowCyBar"; version="1.14.0"; sha256="06wzxlw02x5nzn5qc91yjawrmimsns2kmw4rm3rgbh10d4qh8r09"; depends=[gplots vegan]; }; + flowDensity = derive2 { name="flowDensity"; version="1.12.0"; sha256="1df181ilq7mnwlfvyjjvgd262f2sq09c5wg5fpf531m5jiaj6qpk"; depends=[car flowCore flowWorkspace GEOmap gplots RFOC rgeos sp]; }; + flowFP = derive2 { name="flowFP"; version="1.36.0"; sha256="0kpw90pxappz3mbidfqjv8l6cpc4qg2hgi1wqh4rzx8b2bdl5a8f"; depends=[Biobase BiocGenerics flowCore flowViz]; }; + flowFit = derive2 { name="flowFit"; version="1.16.0"; sha256="0ssyzfngfx31p7v96hgzfzc94n081fll97r6i44pycg42j9bkf6k"; depends=[flowCore flowViz gplots kza minpack_lm]; }; + flowMap = derive2 { name="flowMap"; version="1.16.0"; sha256="1gpxvnil740xnhiphgammis89819vf5s9q06nchwh92j2phj8afr"; depends=[abind ade4 doParallel Matrix reshape2 scales]; }; + flowMatch = derive2 { name="flowMatch"; version="1.14.0"; sha256="0x0719w1k42v9v3i717hyvf3wqii6ldrjmjpvak6jl7w2kn4yfn3"; depends=[Biobase flowCore Rcpp]; }; + flowMeans = derive2 { name="flowMeans"; version="1.38.0"; sha256="0mqgblmfili3nxnfz5h0hrhdl6wz4ylnslyx17kw7pyd0wskd26v"; depends=[Biobase feature flowCore rrcov]; }; + flowMerge = derive2 { name="flowMerge"; version="2.26.0"; sha256="0lpgipgrirhc5i5qzby1krg7vbd4jg566y3i5k18lxsccws12zx6"; depends=[feature flowClust flowCore foreach graph Rgraphviz rrcov snow]; }; + flowPeaks = derive2 { name="flowPeaks"; version="1.22.0"; sha256="0cs0sbs9cx3syjv3dhl9b56s8ccpb00cwz9z18j31yaijl1h13vi"; depends=[]; }; + flowPloidy = derive2 { name="flowPloidy"; version="1.4.1"; sha256="1iqyc6b8lp22lr4xik4ibixc4x6grxvmg18bp2dflp6xkyy7vrq5"; depends=[car caTools flowCore knitr minpack_lm rmarkdown shiny]; }; + flowPlots = derive2 { name="flowPlots"; version="1.26.0"; sha256="0bg523vxnk3kjwwplqykamdfqmyr7b0laxkml06rfr0rbj5lcdc5"; depends=[]; }; + flowQ = derive2 { name="flowQ"; version="1.38.0"; sha256="1vxc7fn747x7i2v0nv821nx9z1d5d4dyd6fa0vbmn7smjkbdxbzd"; depends=[BiocGenerics bioDist flowCore flowViz geneplotter IRanges lattice latticeExtra mvoutlier outliers parody RColorBrewer]; }; + flowQB = derive2 { name="flowQB"; version="2.6.0"; sha256="04hjsswngbxi40rxcb13hzvzm8y7yzpr6qzwhnishp0a5614rzka"; depends=[extremevalues flowCore]; }; + flowStats = derive2 { name="flowStats"; version="3.36.0"; sha256="0l5czm38d2vscw4hbnd79y57gjhdymqjy8kyq86s5g6h4kzir4x7"; depends=[Biobase BiocGenerics cluster fda flowCore flowViz flowWorkspace KernSmooth ks lattice MASS ncdfFlow]; }; + flowTime = derive2 { name="flowTime"; version="1.2.0"; sha256="0308bdkyc1q5s9aasmxdxqh8gzwcmxxdnsamyjl6dkm62s64cf7j"; depends=[flowCore plyr]; }; + flowTrans = derive2 { name="flowTrans"; version="1.30.0"; sha256="0sjpsv908v4gxi55acmmx5c07923adn2p1x8z3bisxv2pwx1n5fw"; depends=[flowClust flowCore flowViz]; }; + flowType = derive2 { name="flowType"; version="2.16.0"; sha256="16z3yxqsgvnwchnfd7bnkj403xxhdifiv8a0ddisy9y1rnil2qpj"; depends=[BH Biobase flowClust flowCore flowMeans flowMerge Rcpp rrcov sfsmisc]; }; + flowUtils = derive2 { name="flowUtils"; version="1.42.0"; sha256="0d4ab30xp722h9avi785wj8z1qz7dy65z5faqf3jc6j6v40bzikq"; depends=[Biobase corpcor flowCore graph RUnit XML]; }; + flowVS = derive2 { name="flowVS"; version="1.10.0"; sha256="07vcqcxzd9cw4hvc1yld2v05zcxqs5p9spka2l80pmsjr0aij043"; depends=[flowCore flowStats flowViz]; }; + flowViz = derive2 { name="flowViz"; version="1.42.0"; sha256="1fbr0snid9vgb133sb5dwkk469n465p8r490r67vsmm8wqsf6iyl"; depends=[Biobase flowCore hexbin IDPmisc KernSmooth lattice latticeExtra MASS RColorBrewer]; }; + flowWorkspace = derive2 { name="flowWorkspace"; version="3.26.5"; sha256="1j1gq3izyngjbspy6c8l8wjdhv3jm21i6aqv8sz262z2g9krqdyf"; depends=[BH Biobase BiocGenerics cytolib data_table dplyr flowCore flowViz graph gridExtra lattice latticeExtra ncdfFlow RBGL RColorBrewer Rcpp Rgraphviz RProtoBufLib scales stringr XML]; }; + flowcatchR = derive2 { name="flowcatchR"; version="1.12.0"; sha256="0i6r86b1g98kaw8nhbnjjrw8gw6vvhfpr5r7dn4whl4hwlizc5qx"; depends=[abind BiocParallel colorRamps EBImage rgl]; }; + fmcsR = derive2 { name="fmcsR"; version="1.20.0"; sha256="0cbbil337zbb968zibkysrmpc8bwlpn7rl908zyvzvj8v11lxzcc"; depends=[BiocGenerics ChemmineR RUnit]; }; + focalCall = derive2 { name="focalCall"; version="1.12.0"; sha256="07lb0ijdsryd31dxp5fgp393p9f21b7in3rnf9j43qn8wmz48hnl"; depends=[CGHcall]; }; + frma = derive2 { name="frma"; version="1.30.1"; sha256="0319m8l7n2sfp4m6zipm7pkc57xikb735qk605m952m8ra08v8ml"; depends=[affy Biobase BiocGenerics DBI MASS oligo oligoClasses preprocessCore]; }; + frmaTools = derive2 { name="frmaTools"; version="1.30.0"; sha256="02z7igfcvhjg9f36snmmif8d7lsca9n9izg8zc543hcy7s704aa2"; depends=[affy Biobase DBI preprocessCore]; }; + funtooNorm = derive2 { name="funtooNorm"; version="1.2.0"; sha256="09n7vq5f26px57sy35s29b8pmb9wcx6kii0h0i354sr3yg21ccpc"; depends=[GenomeInfoDb IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest matrixStats minfi pls]; }; + gCMAP = derive2 { name="gCMAP"; version="1.22.0"; sha256="1ghaidxm8wpg9jx8s9ymlkciwkxjnlr5g5yfjappj7mf4qaqxvil"; depends=[annotate AnnotationDbi bigmemory bigmemoryExtras Biobase Category DESeq genefilter GSEABase GSEAlm limma Matrix]; }; + gCMAPWeb = derive2 { name="gCMAPWeb"; version="1.18.0"; sha256="152nd7vxz3cja8xmg5rq4j08lvd7cw1y09a737bfdq1zwrxc22v8"; depends=[annotate AnnotationDbi Biobase BiocGenerics brew gCMAP GSEABase hwriter Rook yaml]; }; + gCrisprTools = derive2 { name="gCrisprTools"; version="1.6.0"; sha256="0x7bsnhs3qwimfkkxr8yslawdfy83x5ip8j2wlwq4m9hqwqk060g"; depends=[Biobase ggplot2 limma PANTHER_db rmarkdown RobustRankAggreg]; }; + gQTLBase = derive2 { name="gQTLBase"; version="1.10.0"; sha256="1756vfcj2dkkgcmfkkg7qdaig36dv9gfvpypn9rbrky56wm1p035"; depends=[BatchJobs BBmisc BiocGenerics bit doParallel ff ffbase foreach GenomicFiles GenomicRanges rtracklayer S4Vectors SummarizedExperiment]; }; + gQTLstats = derive2 { name="gQTLstats"; version="1.10.1"; sha256="0gvq1sf2zjbkk431x40z6wql3c1rpclnnwa2f1hvykb8mmw70kmq"; depends=[AnnotationDbi BatchJobs BBmisc beeswarm Biobase BiocGenerics doParallel dplyr erma ffbase foreach GenomeInfoDb GenomicFeatures GenomicFiles GenomicRanges ggbeeswarm ggplot2 gQTLBase HardyWeinberg IRanges ldblock limma mgcv plotly reshape2 S4Vectors shiny snpStats SummarizedExperiment VariantAnnotation]; }; + gaga = derive2 { name="gaga"; version="2.24.0"; sha256="1fzk3f4n612iwhxvzd81igl62hb674cjac959ivp8gjx8akw5jpx"; depends=[Biobase coda EBarrays mgcv]; }; + gage = derive2 { name="gage"; version="2.28.2"; sha256="0h0mlhns9j7cpfksvdlvx9jb7szm3r1dwqb3s4s8p8hmkb9byyii"; depends=[AnnotationDbi graph KEGGREST]; }; + gaggle = derive2 { name="gaggle"; version="1.46.0"; sha256="0x6xydavk1dfdqrl97xawq5difaa4v9lhy11941bvfaa9xz01jpv"; depends=[graph rJava RUnit]; }; + gaia = derive2 { name="gaia"; version="2.22.0"; sha256="160l7df4my5n29z2x9579dh0519vyk4d5m4hpmjacr9bh5r9n3va"; depends=[]; }; + garfield = derive2 { name="garfield"; version="1.6.0"; sha256="0lrlk42ic38my0gkkyakkxaxijs6rykkwhvka9zay82spcszmqv8"; depends=[]; }; + gaucho = derive2 { name="gaucho"; version="1.14.0"; sha256="0yf7y9qipdnzcll34q93dyi7q7bmq0iwg38s74d3984wjsqj3l61"; depends=[GA graph heatmap_plus png Rgraphviz]; }; + gcapc = derive2 { name="gcapc"; version="1.2.0"; sha256="0qa9yy6ljnbmb3a5wlwx75p8bwi665d24i029b9drw72zwqv4v81"; depends=[BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS matrixStats Rsamtools S4Vectors]; }; + gcatest = derive2 { name="gcatest"; version="1.8.0"; sha256="0spcxaj4finimyv812j13xp3nxj249blwwaxl308bd84kqd02pnn"; depends=[lfa]; }; + gcrma = derive2 { name="gcrma"; version="2.50.0"; sha256="1s2njjcvqm9siwga20f1z49lhk4cg13chzbk8sfdnvwi57yr6rwh"; depends=[affy affyio Biobase BiocInstaller Biostrings XVector]; }; + gdsfmt = derive2 { name="gdsfmt"; version="1.14.1"; sha256="0d7yj5jm5kyw2jkbrzsyzzx1iw6lg4rbdyrvl7g62bjig6wvk0z1"; depends=[]; }; + geNetClassifier = derive2 { name="geNetClassifier"; version="1.18.0"; sha256="14qvrjbcvkqp2azfqi33y7pwg4wlf1vabddbirinw73za5b4jf48"; depends=[Biobase e1071 EBarrays minet]; }; + geecc = derive2 { name="geecc"; version="1.12.0"; sha256="1njvcwfdbpvmvvx8lcfw0baigjldr0v0rkqbk2rhb0h6wsiljfm2"; depends=[gplots hypergea MASS Rcpp]; }; + genArise = derive2 { name="genArise"; version="1.54.0"; sha256="101dammhv29w78cm2xylln4s7rzcy6sqw44navzs260xccdipxab"; depends=[locfit tkrplot xtable]; }; + genbankr = derive2 { name="genbankr"; version="1.6.0"; sha256="0yy9mjcd354g7gw73rx00q079xjaaka20imn3afmxv80gprhss5f"; depends=[Biobase BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges IRanges rtracklayer S4Vectors VariantAnnotation]; }; + geneAttribution = derive2 { name="geneAttribution"; version="1.4.0"; sha256="11p8zqmmcfccl0fnyjm5kv8rbasamj6mra3bvk5jxsi4cqmbx9wx"; depends=[BiocGenerics GenomeInfoDb GenomicFeatures GenomicRanges IRanges org_Hs_eg_db rtracklayer]; }; + geneClassifiers = derive2 { name="geneClassifiers"; version="1.2.0"; sha256="1canrqw0g6v32vy2p2xd4pz6kw5k2zyzgff5ii0p86w519dzg16v"; depends=[Biobase BiocGenerics]; }; + geneRecommender = derive2 { name="geneRecommender"; version="1.50.0"; sha256="16cf2zkjffmdr2lhm7b4ckcw6p0kx40whw36m6y9510i8pmzy3y9"; depends=[Biobase]; }; + geneRxCluster = derive2 { name="geneRxCluster"; version="1.14.0"; sha256="0r0lnhf19qw1d4p87632lz0rgx0d9q3cakpd6qh43b10fil7wjgp"; depends=[GenomicRanges IRanges]; }; + geneXtendeR = derive2 { name="geneXtendeR"; version="1.4.0"; sha256="02a3aqn115l85cnvxy16ppri4hwir6mcp1av6s00nj66afxxnzmv"; depends=[AnnotationDbi data_table dplyr GO_db networkD3 org_Ag_eg_db org_Bt_eg_db org_Ce_eg_db org_Cf_eg_db org_Dm_eg_db org_Dr_eg_db org_Gg_eg_db org_Hs_eg_db org_Mm_eg_db org_Mmu_eg_db org_Pt_eg_db org_Rn_eg_db org_Sc_sgd_db org_Ss_eg_db org_Xl_eg_db RColorBrewer rtracklayer SnowballC tm wordcloud]; }; + genefilter = derive2 { name="genefilter"; version="1.60.0"; sha256="173swlg6gj4kdllbqvyiw5dggbcxiwlwpqmllsv4dxzn7h25i3g7"; depends=[annotate AnnotationDbi Biobase S4Vectors survival]; }; + genefu = derive2 { name="genefu"; version="2.10.0"; sha256="0pg9425z0inlbgvi15d050s6928xyqbxj36kk12z3dh3w2gwkycf"; depends=[AIMS amap biomaRt iC10 limma mclust survcomp]; }; + geneplast = derive2 { name="geneplast"; version="1.4.0"; sha256="12ncf9rpnv1mwmdw4rbzzhggppcnzch764aiipy0jb21ix9xj61q"; depends=[ape snow]; }; + geneplotter = derive2 { name="geneplotter"; version="1.56.0"; sha256="1z3g7frc1iviwrsv2dlm4nqvkc0685h4va0388yfxn102ln8wwma"; depends=[annotate AnnotationDbi Biobase BiocGenerics lattice RColorBrewer]; }; + genoCN = derive2 { name="genoCN"; version="1.30.0"; sha256="0m4sj2w0zra67d939knzriwda0nwphzspsmnl9jakl0kq8dvhjki"; depends=[]; }; + genomation = derive2 { name="genomation"; version="1.11.3"; sha256="1d2g1v6xhrf3gm86pv8ln22df5g6v6k6i4i39v4j82zn4apany6v"; depends=[Biostrings BSgenome data_table GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridBase impute IRanges matrixStats plotrix plyr Rcpp readr reshape2 Rsamtools rtracklayer RUnit S4Vectors seqPattern]; }; + genomeIntervals = derive2 { name="genomeIntervals"; version="1.34.0"; sha256="11jlmfy8i245s3bnkcg49s8vrqfkrp5w2ibxdcixyckm7pzrv29r"; depends=[BiocGenerics GenomeInfoDb GenomicRanges intervals IRanges S4Vectors]; }; + genomes = derive2 { name="genomes"; version="3.8.0"; sha256="09ib88jqncywzc1rmjbj6p1i6nrrmbqxsn6jajdgqlgw8kpb490y"; depends=[curl readr]; }; + genoset = derive2 { name="genoset"; version="1.34.0"; sha256="1cw6g8r3n33xlqmbjsfn6kkdzz19kh71ag529sjbk9wlxi69rrz0"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges S4Vectors SummarizedExperiment]; }; + genotypeeval = derive2 { name="genotypeeval"; version="1.10.0"; sha256="1pff2n1s350j6i7klsnwqlizkdvvfpyqqrvc7kq5gj7yh508dxy9"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges ggplot2 IRanges rtracklayer Rtsne VariantAnnotation]; }; + genphen = derive2 { name="genphen"; version="1.6.0"; sha256="0m1g1hfhhbq3xjdr2fjf3wbng6d953kci965h298c168dv3864k6"; depends=[Biostrings e1071 effsize ggplot2 randomForest rjags]; }; + gespeR = derive2 { name="gespeR"; version="1.10.0"; sha256="09xd080b08bfpqqbha4rxn4vmglv7c5asd4gibfjgjkasd78g40m"; depends=[Biobase biomaRt cellHTS2 doParallel dplyr foreach ggplot2 glmnet Matrix reshape2]; }; + ggbio = derive2 { name="ggbio"; version="1.26.0"; sha256="1bqxfqy0hff87ax92z4lfbjz01ndrz7x8pzm6dlkdmi52p30krm9"; depends=[AnnotationDbi AnnotationFilter Biobase BiocGenerics Biostrings biovizBase BSgenome ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GGally ggplot2 gridExtra gtable Hmisc IRanges OrganismDbi reshape2 Rsamtools rtracklayer S4Vectors scales SummarizedExperiment VariantAnnotation]; }; + ggcyto = derive2 { name="ggcyto"; version="1.6.1"; sha256="07rsg673hnrn1kf82nb59sxa925hjlb3qnjwlxvzlr2lzs958rcd"; depends=[data_table flowCore flowWorkspace ggplot2 gridExtra ncdfFlow plyr RColorBrewer scales]; }; + ggtree = derive2 { name="ggtree"; version="1.10.4"; sha256="1ja6ynzhqyrf4gl0haf18h36zwrc0cj9969an94c23h4ksppw0m1"; depends=[ape ggplot2 magrittr rvcheck scales tidyr treeio]; }; + girafe = derive2 { name="girafe"; version="1.30.0"; sha256="0k8fjn7d1hxwin0vywly7vc570048i7nckhyw9j4cind6fi6f75v"; depends=[Biobase BiocGenerics Biostrings genomeIntervals intervals IRanges Rsamtools S4Vectors ShortRead]; }; + globalSeq = derive2 { name="globalSeq"; version="1.6.0"; sha256="19aws180r5gwxrz6xmfgic0mp8piki2qmzrxyy1f75866blk3r4f"; depends=[]; }; + globaltest = derive2 { name="globaltest"; version="5.32.0"; sha256="1fk9yk6n3aqigcly5zsb0jnb6jmdbn3jgbp1wyv6sby124sr4hmr"; depends=[annotate AnnotationDbi Biobase survival]; }; + gmapR = derive2 { name="gmapR"; version="1.20.0"; sha256="158ql56mbc1fw5nyzyw4cx4p5zyavwdm9117hy3ka3cxdpqaihbs"; depends=[Biobase BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; + goProfiles = derive2 { name="goProfiles"; version="1.40.0"; sha256="0fdlqmyglgrpjcc24vp3mfz8yq6v79lnzvnkxj8rslnhddcf6lkq"; depends=[AnnotationDbi Biobase GO_db]; }; + goSTAG = derive2 { name="goSTAG"; version="1.2.0"; sha256="07v5yqzsagygmz8kpkjmy8f2g8p7997mvkisi5jb1kd00hggzpw9"; depends=[AnnotationDbi biomaRt GO_db memoise]; }; + goTools = derive2 { name="goTools"; version="1.52.0"; sha256="07wa206pk7wqawgs77009cjrd8xx6wvxzaakahcc1hh0hawhkk2r"; depends=[AnnotationDbi GO_db]; }; + goseq = derive2 { name="goseq"; version="1.30.0"; sha256="01nnlh40v4zs8h26bf5ksl72a8826vl1lhdlfqawk304wr7k8kkf"; depends=[AnnotationDbi BiasedUrn BiocGenerics geneLenDataBase GO_db mgcv]; }; + gpls = derive2 { name="gpls"; version="1.50.0"; sha256="0sp3c783wxgg3g37yqq4901rdygl54ab2wqyjcgl2jrajaw44m3g"; depends=[]; }; + gprege = derive2 { name="gprege"; version="1.22.0"; sha256="1k77dxm1mf761par04pfs27qwpy2s43a5z91z9r9zpjp9sb37nnf"; depends=[gptk]; }; + graph = derive2 { name="graph"; version="1.56.0"; sha256="15aajjp8h2z14p80c8hyd4rrmr9vqsm7bvwb989jxjl4k6g52an1"; depends=[BiocGenerics]; }; + graphite = derive2 { name="graphite"; version="1.24.1"; sha256="1ddqm2dlazczr8471171gznbpmm8cykxqn9c7vg3c3ysj7qmgxzx"; depends=[AnnotationDbi checkmate graph httr rappdirs]; }; + groHMM = derive2 { name="groHMM"; version="1.12.0"; sha256="0cjkj0ypyc4dfi9s8dh88kh6q4xlpnc0wal7njg4b4gqj0l2hva7"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS rtracklayer S4Vectors]; }; + gtrellis = derive2 { name="gtrellis"; version="1.11.1"; sha256="0mx4xvaipd0ydlnn4rlgbc47phlqgpihc55la6hv1fz2rs3k948v"; depends=[circlize GenomicRanges GetoptLong IRanges]; }; + gwascat = derive2 { name="gwascat"; version="2.10.0"; sha256="0n5x5i5v6a8wpn5mxmlpkl34b4kyypmymiwww6g61zch7xqrgywi"; depends=[AnnotationDbi AnnotationHub BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 gQTLstats graph Gviz Homo_sapiens IRanges Rsamtools rtracklayer S4Vectors snpStats SummarizedExperiment VariantAnnotation]; }; + h5vc = derive2 { name="h5vc"; version="2.12.0"; sha256="181rsqda0bs7w2vz5dg3xzffla7yvlfkk7pfc0dzsjhw1b0yf3lx"; depends=[abind BatchJobs BiocParallel Biostrings GenomeInfoDb GenomicRanges ggplot2 gridExtra h5vcData IRanges reshape rhdf5 Rsamtools S4Vectors]; }; + hapFabia = derive2 { name="hapFabia"; version="1.20.0"; sha256="0mnc2mh3sqagvzhws1qr8vb57gp1r7n65wq6264vab2zcklhq7mh"; depends=[Biobase fabia]; }; + heatmaps = derive2 { name="heatmaps"; version="1.2.0"; sha256="0kkfzxx1ccacy4gyv9nj151w137ca084rja8kakcnnvp3vcwn5z8"; depends=[BiocGenerics Biostrings EBImage GenomeInfoDb GenomicRanges IRanges KernSmooth Matrix plotrix RColorBrewer]; }; + hiAnnotator = derive2 { name="hiAnnotator"; version="1.12.0"; sha256="0xa1x8xilh2x6xnnghz10j5r4q3ib5j28wkik7r79kpvzw7i55xc"; depends=[BSgenome dplyr foreach GenomicRanges ggplot2 iterators rtracklayer scales]; }; + hiReadsProcessor = derive2 { name="hiReadsProcessor"; version="1.14.0"; sha256="1aa12m9r7zzcf91xpn8dfagr3cqp5wcp0gmkcczknavj8wgzzjmp"; depends=[BiocGenerics BiocParallel Biostrings dplyr GenomicAlignments GenomicRanges hiAnnotator readxl rSFFreader sonicLength]; }; + hicrep = derive2 { name="hicrep"; version="1.2.0"; sha256="0fza8zngc3cn8why5qfqscfsbj3nblbvxk4maj2ccsgpc0lrkb52"; depends=[]; }; + hierGWAS = derive2 { name="hierGWAS"; version="1.8.0"; sha256="0kyxyv5vi7q6pfjxqbxi99f3p6g9fckjafgqkv3fg98sn2nb7zyh"; depends=[fastcluster fmsb glmnet]; }; + hopach = derive2 { name="hopach"; version="2.38.0"; sha256="1v28bbz3bp7a5rpd02mxfxznhl4iwnn2bkh2kf25g64chg4jksfx"; depends=[Biobase BiocGenerics cluster]; }; + hpar = derive2 { name="hpar"; version="1.20.0"; sha256="0s5v79mgxdx862v1jrdf5pdap81nz5vjx25ni8s3sl97ldckf6j8"; depends=[]; }; + htSeqTools = derive2 { name="htSeqTools"; version="1.26.0"; sha256="1migbh30hh2bpa63iv1l0jqnz9ryvkx4apwyj0qzyd07b2p55qcz"; depends=[Biobase BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges MASS S4Vectors]; }; + hyperdraw = derive2 { name="hyperdraw"; version="1.30.0"; sha256="00fi3687bnddjzx46y98i2pqm7dczn4icgsrbhhyhqkwg49v97hr"; depends=[graph hypergraph Rgraphviz]; }; + hypergraph = derive2 { name="hypergraph"; version="1.50.0"; sha256="1c0f5fp6ybn88y1k408flqnndfjzfkig7vhbfxny1a43yyr0aib5"; depends=[graph]; }; + iASeq = derive2 { name="iASeq"; version="1.22.0"; sha256="1kp787zv6h4wcp3naz0zbpw1z1m2vdg1xc9db31a9j2kbv7j9xd2"; depends=[]; }; + iBBiG = derive2 { name="iBBiG"; version="1.22.0"; sha256="0vcwv1kf0mm21bx4ab6z1fn0gcgqaygrcrln0c96kpdz3zsx37mw"; depends=[ade4 biclust xtable]; }; + iBMQ = derive2 { name="iBMQ"; version="1.18.0"; sha256="12gdj5ngagydkrb18hn8cms3bsvzdd3pkzrqdfxw16ppm1sy6mbd"; depends=[Biobase ggplot2]; }; + iCARE = derive2 { name="iCARE"; version="1.6.0"; sha256="1cdw483lmqi605s1chfwzjk7kqxbky3pya4nyvmnggv4r4nc26qk"; depends=[]; }; + iCOBRA = derive2 { name="iCOBRA"; version="1.6.0"; sha256="1y2h7d689wnvspvpkcih2z21r6yi70iicjyr3z91czqbr6vw5hsd"; depends=[dplyr DT ggplot2 limma reshape2 ROCR scales shiny shinyBS shinydashboard UpSetR]; }; + iCheck = derive2 { name="iCheck"; version="1.8.0"; sha256="0z2hz21vd8j08ivnqq1w8n9qyn8h7sr56fl42npq6a6zyi7ab4zf"; depends=[affy Biobase GeneSelectMMD gplots limma lmtest lumi MASS preprocessCore randomForest rgl scatterplot3d]; }; + iChip = derive2 { name="iChip"; version="1.32.0"; sha256="02cpv5nkbyjnjxcbavdxy8m6fwkj03nqss49gp30mv1a2wnin7w0"; depends=[limma]; }; + iClusterPlus = derive2 { name="iClusterPlus"; version="1.14.0"; sha256="06a9iavp24rkj64plzw505crg02hcd06g68drs8fgfabvdlb2jiy"; depends=[]; }; + iGC = derive2 { name="iGC"; version="1.8.0"; sha256="125n780c9hx7wh5s1w21j3j71bzw1wa3gxapsnkcrn1vzh8agbmj"; depends=[data_table plyr]; }; + iPAC = derive2 { name="iPAC"; version="1.22.0"; sha256="1x5npvg3k8jmj2xbx0p871iii51gwxqwk0waczd58ylvv023j1gr"; depends=[Biostrings gdata multtest scatterplot3d]; }; + iSeq = derive2 { name="iSeq"; version="1.30.0"; sha256="0rypm4dhkkgd1j7vzbpcm2n6b6qcig483si46r16fwkn4hzwb11v"; depends=[]; }; + ibh = derive2 { name="ibh"; version="1.26.0"; sha256="08f1a3f0m8900y3rgrq7v9ww6055bwpqc3liqpm0yf8fz3n83wnm"; depends=[simpIntLists]; }; + ideal = derive2 { name="ideal"; version="1.2.0"; sha256="0fyh6y8k5ly19y2iysgvjsgagla0pfsihf3wwqzdcx0hp6f6ksz9"; depends=[AnnotationDbi BiocParallel d3heatmap DESeq2 dplyr DT GenomicRanges ggplot2 GO_db goseq GOstats gplots IHW IRanges knitr limma pcaExplorer pheatmap plyr rentrez rintrojs rmarkdown S4Vectors shiny shinyAce shinyBS shinydashboard stringr SummarizedExperiment topGO UpSetR]; }; + idiogram = derive2 { name="idiogram"; version="1.54.0"; sha256="0y3wv1bqnaa624c4425qh8sz0sd57pvd16wgxb1i88ryb2q7gc6n"; depends=[annotate Biobase plotrix]; }; + illuminaio = derive2 { name="illuminaio"; version="0.20.0"; sha256="02miyvard3y0d6qwbhq37bp4qypwph09k09630v6calr2q4jmzdh"; depends=[base64]; }; + imageHTS = derive2 { name="imageHTS"; version="1.28.1"; sha256="18y5wfxfxp4lw1cxxps662gm4wsjs30di455zhpgw65l7y76r5jh"; depends=[Biobase cellHTS2 e1071 EBImage hwriter vsn]; }; + immunoClust = derive2 { name="immunoClust"; version="1.10.0"; sha256="1mxrg832ziys1wq3vbs6gqdbg0j85y3dnqkkffmz4srl6733z9c1"; depends=[flowCore lattice]; }; + impute = derive2 { name="impute"; version="1.52.0"; sha256="0b8r4swvyx3cjcc2ky8yn0ncpzlbi1pgfsn3wpbjmhh7sqrffm2n"; depends=[]; }; + intansv = derive2 { name="intansv"; version="1.18.0"; sha256="0y76a4bv8lyrlvcl8xz4268xw358wwxys2xqkgznk8l3hxrswbmv"; depends=[BiocGenerics GenomicRanges ggbio IRanges plyr]; }; + interactiveDisplay = derive2 { name="interactiveDisplay"; version="1.16.0"; sha256="01zxpbfx3nirvgw34v1wi62p4n6h2abqzfh89rcvlcdyw7vwgsrg"; depends=[AnnotationDbi BiocGenerics Category ggplot2 gridSVG interactiveDisplayBase plyr RColorBrewer reshape2 shiny XML]; }; + interactiveDisplayBase = derive2 { name="interactiveDisplayBase"; version="1.16.0"; sha256="01yb945jqqimwjgriza6yy4dnp303cdirxrhl4hjyprfdlmnz5p5"; depends=[BiocGenerics shiny]; }; + inveRsion = derive2 { name="inveRsion"; version="1.26.0"; sha256="12gfn4kxw5phb0vf1lx30vdp4lh4jxsdgy5ddbdgiv87cbzz6ldi"; depends=[haplo_stats]; }; + iontree = derive2 { name="iontree"; version="1.24.0"; sha256="196b8pbnkyai4lxij17mhc8hikgdxcbdsqa04cck27fkplbiy6pq"; depends=[rJava RSQLite XML]; }; + isobar = derive2 { name="isobar"; version="1.24.0"; sha256="1n27wks04fiqw3qm1nkjh533qk3fwnxivganl9x5c29jfmglzmk9"; depends=[Biobase biomaRt distr ggplot2 plyr]; }; + isomiRs = derive2 { name="isomiRs"; version="1.6.0"; sha256="0bgcbwfx1clcq38fkvw9d60rz2zhww77nppb26mhzazmibhxyaa2"; depends=[Biobase BiocGenerics DESeq2 DiscriMiner dplyr gamlss gamlss_dist GenomicRanges GGally ggplot2 gplots gridExtra gtools IRanges lme4 RColorBrewer RcppEigen readr reshape S4Vectors SummarizedExperiment tidyr TMB]; }; + iterClust = derive2 { name="iterClust"; version="1.0.0"; sha256="05fdil91cg2z90vfyahhkjj5mj4ajsrxaddl9qfdk86lx0q7migb"; depends=[Biobase cluster]; }; + iterativeBMA = derive2 { name="iterativeBMA"; version="1.36.0"; sha256="0ck8fqici1916ardwp04grnclg6ydl731mcbd0xh1a1k7zzd0jbc"; depends=[Biobase BMA leaps]; }; + iterativeBMAsurv = derive2 { name="iterativeBMAsurv"; version="1.36.0"; sha256="096qnp9wisc4hnpgy37a4h1xb1f01kqc9rhrhfkp25wkf1yxgwmi"; depends=[BMA leaps survival]; }; + ivygapSE = derive2 { name="ivygapSE"; version="1.0.0"; sha256="1y82cm0xmddhfz12iqqwpq9ifaml3r0yxs4c3cvp6k2c0wlhl173"; depends=[ggplot2 hwriter plotly S4Vectors shiny SummarizedExperiment survival survminer UpSetR]; }; + joda = derive2 { name="joda"; version="1.26.0"; sha256="0qwfkq40zl16lngrmhw8lxx1qn5lh076nl6bydrzksvh1bjs78b6"; depends=[bgmm RBGL]; }; + karyoploteR = derive2 { name="karyoploteR"; version="1.4.1"; sha256="0sq6iinign7ndw2wg1gfz7chbalyqycb8j0cai6zakaxjxav2dsc"; depends=[bezier biovizBase digest GenomeInfoDb GenomicRanges IRanges memoise regioneR Rsamtools rtracklayer S4Vectors]; }; + kebabs = derive2 { name="kebabs"; version="1.12.0"; sha256="1mbymzrbwzzfd5ygf8fk89igv7x0damgskri39fj913aqifgkf42"; depends=[apcluster Biostrings e1071 IRanges kernlab LiblineaR Matrix Rcpp S4Vectors XVector]; }; + keggorthology = derive2 { name="keggorthology"; version="2.30.0"; sha256="117s7b32nkv95adh2j91b87r90svhfb91ag28brsq3r333m2q8cn"; depends=[AnnotationDbi DBI graph hgu95av2_db]; }; + kimod = derive2 { name="kimod"; version="1.6.0"; sha256="0mb9bv6bz7k27vs8rl26kh2zm8mvpkgzqhgc471lp4qz8f4fsbxc"; depends=[Biobase cluster]; }; + lapmix = derive2 { name="lapmix"; version="1.44.0"; sha256="1b7daaqsq3bvb1wbhf99pk8kl4pm4kac7bnx211isr7ica34pxb5"; depends=[Biobase]; }; + ldblock = derive2 { name="ldblock"; version="1.8.0"; sha256="18nfsixh6d2wfrb9laqsgly5w1frzihhak683k0p8fdf51h4aqba"; depends=[erma GenomeInfoDb GenomicFiles GO_db Homo_sapiens Matrix Rsamtools snpStats VariantAnnotation]; }; + les = derive2 { name="les"; version="1.28.0"; sha256="0xy7ggc2b20i1c78mww84xvc0jhbinxn00nbfvnbw997vjqr7r79"; depends=[boot fdrtool gplots RColorBrewer]; }; + lfa = derive2 { name="lfa"; version="1.8.0"; sha256="06w0032wwqm2cxid7brb6iq6bkhqc5x3a08wwyjbib6lnj5n7rvh"; depends=[corpcor]; }; + limma = derive2 { name="limma"; version="3.34.8"; sha256="0bmxsgz2yll83sd3wbxsrsfd35468igb0d8lldym0d0lqfz906bw"; depends=[]; }; + limmaGUI = derive2 { name="limmaGUI"; version="1.54.0"; sha256="1mhqxy4bfb38lp57wrm6jm57xbwhqz6z78cxjdjr8r9inysddjlp"; depends=[AnnotationDbi BiocInstaller gcrma limma R2HTML tkrplot xtable]; }; + lmdme = derive2 { name="lmdme"; version="1.20.0"; sha256="1742ffw592cpp0bxd38g4k51h28iaax995lzmgxb3di6kj6h8an3"; depends=[limma pls stemHypoxia]; }; + logicFS = derive2 { name="logicFS"; version="1.48.0"; sha256="1qkbc6xgmppicg30613ak0dy8fn1irq6n8kf2qvwd95y210zlcfv"; depends=[LogicReg mcbiopi]; }; + logitT = derive2 { name="logitT"; version="1.36.0"; sha256="08jb55ccxbdcyrd497lgdhwkmj97r9rl21jc411l7fwckqz3pgwn"; depends=[affy]; }; + lol = derive2 { name="lol"; version="1.26.0"; sha256="00wl4zw0qvinb2cy0cbcgrg0a9xr6s7b4y30ykd4666fmdk60dg3"; depends=[Matrix penalized]; }; + lpNet = derive2 { name="lpNet"; version="2.10.0"; sha256="0r3xyhws10fq84y2rxv9v5wqbg05di4kkccv1l63idf38g33dvs1"; depends=[lpSolve nem]; }; + lpsymphony = derive2 { name="lpsymphony"; version="1.7.1"; sha256="1qm131flq00dgvkdv6qz8xbh24qqadg8hn35q6ymsv6ql390xi06"; depends=[]; }; + lumi = derive2 { name="lumi"; version="2.30.0"; sha256="1gy0137h5l2xmq3ahqsgg0lzczgbqck4qrqbgfnh8r0cb2r8vaaj"; depends=[affy annotate AnnotationDbi Biobase DBI GenomicFeatures GenomicRanges KernSmooth lattice MASS methylumi mgcv nleqslv preprocessCore RSQLite]; }; + mAPKL = derive2 { name="mAPKL"; version="1.8.0"; sha256="08f6r31zlabsa7b8k5cnnwir7scjaix6mnnkgfs5h4gvb49vrbbm"; depends=[AnnotationDbi apcluster Biobase clusterSim e1071 igraph limma multtest parmigene reactome_db]; }; + mBPCR = derive2 { name="mBPCR"; version="1.32.0"; sha256="0wvwfq4aqnhn0943v807sij3dasf93l3rhvcj7a65jpv4csd4vx2"; depends=[Biobase oligoClasses SNPchip]; }; + mQTL_NMR = derive2 { name="mQTL.NMR"; version="1.12.0"; sha256="0iijl9afnynhh2pa9v1xj5b1cf0svjzlkvg3al8jrv0i28jibvi7"; depends=[GenABEL MASS outliers qtl]; }; + maCorrPlot = derive2 { name="maCorrPlot"; version="1.48.0"; sha256="0jy6b57pi58795v1xhshaqrvpd27qarzv06r8il0d9085asc3v1r"; depends=[lattice]; }; + maPredictDSC = derive2 { name="maPredictDSC"; version="1.16.0"; sha256="02wzz7s6cr0bligvxm37gwkbhzwfmaki27drbdaaiyssqmdb4bkq"; depends=[affy AnnotationDbi caret class e1071 gcrma hgu133plus2_db limma LungCancerACvsSCCGEO MASS ROC ROCR]; }; + maSigPro = derive2 { name="maSigPro"; version="1.50.0"; sha256="1d6rwfm42spfbqsbssbrc69rv2fj8gcxm4na9k66vij7dwi8nvd0"; depends=[Biobase MASS mclust venn]; }; + maanova = derive2 { name="maanova"; version="1.48.0"; sha256="1vvjk6y8mp5h7l8yk4f1y48jx5k9fl9s12x2mgsbap306paw860q"; depends=[Biobase]; }; + macat = derive2 { name="macat"; version="1.52.0"; sha256="168jw5bi1nbj2dfhipnvja7w0avmiw6vrvdany73d41fvigmagj5"; depends=[annotate Biobase]; }; + made4 = derive2 { name="made4"; version="1.52.0"; sha256="1ns7f47l7ig2fm95l67ppym5gbkbr8lp18vx51pqwjg8r5rvj9sc"; depends=[ade4 gplots RColorBrewer scatterplot3d]; }; + maftools = derive2 { name="maftools"; version="1.4.21"; sha256="0xcqfnp7qx9gr5nr8bd00cqa7b1d32nb14cj0ymhazsyd2ja9wv5"; depends=[Biostrings changepoint cometExactTest ComplexHeatmap cowplot data_table ggplot2 ggrepel gridExtra mclust NMF RColorBrewer rjson Rsamtools survival VariantAnnotation wordcloud]; }; + maigesPack = derive2 { name="maigesPack"; version="1.42.0"; sha256="1c92kkr2rmfydckmbvri8g0lzz1v3hx93zpmb1pwrnlfpm01j95j"; depends=[convert graph limma marray]; }; + makecdfenv = derive2 { name="makecdfenv"; version="1.54.0"; sha256="17fmzd12acdpq3vfnqrafmmg5jcmdgkf83mrqjpw92zah2w8490a"; depends=[affy affyio Biobase zlibbioc]; }; + manta = derive2 { name="manta"; version="1.24.0"; sha256="060x5rdzkx882pa8x9w7j3sgj0clar6w35yblbcggq579r9jpx06"; depends=[caroline edgeR Hmisc]; }; + mapscape = derive2 { name="mapscape"; version="1.2.0"; sha256="1nsr3n0vb0a9bzv2d9mginl5lcv8dvxpkv86ygn790bbkz35fq8x"; depends=[base64enc htmlwidgets jsonlite stringr]; }; + marray = derive2 { name="marray"; version="1.56.0"; sha256="14c93i86yc7jn4ax8p4l0z6v9xisw1bv7gzb4a0gbxhxn7mddaic"; depends=[limma]; }; + maskBAD = derive2 { name="maskBAD"; version="1.22.0"; sha256="0rg2r9yg3wviz0s5z5palmzbqb4cya4b0hd6w43fnwrfp46hqlp8"; depends=[affy gcrma]; }; + massiR = derive2 { name="massiR"; version="1.14.0"; sha256="17bb7cm6wiwygxvp37gjiagxzali2023ikwxpqwghz6dn58nkqnl"; depends=[Biobase cluster diptest gplots]; }; + matchBox = derive2 { name="matchBox"; version="1.20.0"; sha256="0m9swn284xk6y7vw2l8r5yjbq0b7x8n8ypd706fz9yc5ppg89h4j"; depends=[]; }; + matter = derive2 { name="matter"; version="1.4.1"; sha256="1l8z30pzl0jssdkfmzwa5741mbn81sraw79jm38qv7h72mjsm891"; depends=[biglm BiocGenerics irlba]; }; + mcaGUI = derive2 { name="mcaGUI"; version="1.26.0"; sha256="1ymdlc23jc0glfg15nlax71awkhqbaz5xv7pxnppf2m5sz73gfy0"; depends=[bpca foreign gWidgets gWidgetsRGtk2 lattice MASS OTUbase proto vegan]; }; + mdgsa = derive2 { name="mdgsa"; version="1.10.0"; sha256="0xivpr1w41pzvfs4hjyc0vvmrbq0pbckai7j2vf4iq5sxxc4xyv3"; depends=[AnnotationDbi cluster DBI GO_db KEGG_db Matrix]; }; + mdqc = derive2 { name="mdqc"; version="1.40.0"; sha256="0khrkhl4ksvls4qb0273zn9bc9dzd6234v1ly6vb2b2dslm8z9r0"; depends=[cluster MASS]; }; + meshes = derive2 { name="meshes"; version="1.4.0"; sha256="1sz2hj16q0swz13vfaf63njg920xnx9ysdcbwfqlyik1i7s0c0h2"; depends=[AnnotationDbi DOSE GOSemSim MeSH_db rvcheck]; }; + meshr = derive2 { name="meshr"; version="1.14.0"; sha256="00k37apfbfw1qxvh8wz1hg9gg32h8lib9yw0i9y1882krz61x5b6"; depends=[BiocGenerics Category cummeRbund fdrtool MeSH_Aca_eg_db MeSH_AOR_db MeSH_Bsu_168_eg_db MeSH_db MeSH_Hsa_eg_db MeSH_PCR_db MeSH_Syn_eg_db MeSHDbi org_Hs_eg_db S4Vectors]; }; + messina = derive2 { name="messina"; version="1.14.0"; sha256="0483dvnq6ns4pfq8axcqgbd2n3b8i1b9063appyi5cqfa29s2sqm"; depends=[foreach ggplot2 plyr Rcpp survival]; }; + metaArray = derive2 { name="metaArray"; version="1.56.0"; sha256="1n3hmf0gajfpg5gmjgdxnpb4x395wm03bpfvccgnkkwfv6qrzd7v"; depends=[Biobase MergeMaid]; }; + metaCCA = derive2 { name="metaCCA"; version="1.6.0"; sha256="02a6562i2gddnk0izlrsdby7sx2s36axkdwy8c1z92s4n71m05q1"; depends=[]; }; + metaMS = derive2 { name="metaMS"; version="1.14.0"; sha256="1lp0i0pf1xc0rhr61rh7qna0hbl0svqm5ysfgdl04i2ghglrrmqm"; depends=[BiocGenerics CAMERA Matrix robustbase xcms]; }; + metaSeq = derive2 { name="metaSeq"; version="1.18.0"; sha256="1d8rr4nwbqxb7amdfrphw2ndyfhh74w20qgbzwlfc0wppwfwm5rr"; depends=[NOISeq Rcpp snow]; }; + metabomxtr = derive2 { name="metabomxtr"; version="1.12.0"; sha256="0214idivldfmfym3hkj7qicmcjiymikag3ydqxp7fq8m7vb3vxdz"; depends=[Biobase BiocParallel Formula ggplot2 multtest optimx plyr]; }; + metagene = derive2 { name="metagene"; version="2.10.1"; sha256="0h7i6jgpz8zh9l1w0w82333bnw7zrdn577s5ma2lcpfpybrr17zs"; depends=[BiocParallel data_table DBChIP EnsDb_Hsapiens_v86 ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gplots IRanges magrittr matrixStats muStat purrr R6 Rsamtools rtracklayer stringr]; }; + metagenomeFeatures = derive2 { name="metagenomeFeatures"; version="1.10.0"; sha256="1c8l4dvw9vaw2kcc11a8six5rcayc2girzzz88lq4a2ly5f225kv"; depends=[ape Biobase Biostrings dbplyr dplyr lattice lazyeval magrittr metagenomeSeq purrr RSQLite ShortRead stringr]; }; + metagenomeSeq = derive2 { name="metagenomeSeq"; version="1.20.1"; sha256="15ib66lir0smsk1zq41g5nf6r93wvg5a3bai44gg7f1cgc5xf4xp"; depends=[Biobase foreach glmnet gplots limma Matrix matrixStats RColorBrewer]; }; + metahdep = derive2 { name="metahdep"; version="1.36.0"; sha256="10v5zx3xn9xr18qwb2hy3566xzk4a38084xvbs7cfh9aypq58zfj"; depends=[]; }; + metaseqR = derive2 { name="metaseqR"; version="1.18.0"; sha256="0g707gimklmnhmgicvslmbzam67fmh3h9h4nsqv41pc5kp74n6ql"; depends=[baySeq biomaRt brew corrplot DESeq EDASeq edgeR gplots limma log4r NBPSeq NOISeq qvalue rjson vsn]; }; + metavizr = derive2 { name="metavizr"; version="1.2.1"; sha256="114nr1nb8wniqb8gq0v6ah9vimbf4k1iy0k2chr0rz6jh7b4larc"; depends=[Biobase data_table digest epivizr epivizrData epivizrServer epivizrStandalone GenomeInfoDb httr metagenomeSeq phyloseq vegan]; }; + methInheritSim = derive2 { name="methInheritSim"; version="1.0.0"; sha256="0ji9yz4x8yk9d156ssfcf4mv0gkrbrfh37w1saywap4680ap47r3"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges methylKit msm S4Vectors]; }; + methVisual = derive2 { name="methVisual"; version="1.30.0"; sha256="0xdzmvhs4hjj12w6lfwa7vcikdgc08krqxdak1959zclw4mp4jq6"; depends=[Biostrings ca gridBase gsubfn IRanges plotrix sqldf]; }; + methimpute = derive2 { name="methimpute"; version="1.0.0"; sha256="0fgdd7dqs2sjvm3g0ivlnb61d8ccc32zvwbjgaw2raz6g4dm4c53"; depends=[Biostrings GenomeInfoDb GenomicRanges ggplot2 IRanges minpack_lm Rcpp reshape2]; }; + methyAnalysis = derive2 { name="methyAnalysis"; version="1.20.0"; sha256="0cmgv74pc4gj1qrsk2a7hx45vssf73hcc80zpqlhwzy3yg103ql3"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt genefilter GenomeInfoDb GenomicFeatures GenomicRanges genoset Gviz IRanges lumi methylumi org_Hs_eg_db rtracklayer SummarizedExperiment VariantAnnotation]; }; + methylInheritance = derive2 { name="methylInheritance"; version="1.2.0"; sha256="05i7z2b0xyszfadkk0qcgvhx6fxlfv7dcqj6ix0y0349fgsd2phz"; depends=[BiocParallel GenomicRanges ggplot2 gridExtra IRanges methylKit rebus S4Vectors]; }; + methylKit = derive2 { name="methylKit"; version="1.4.1"; sha256="1k0nfn9318sgwm4z963bhnbp4c3zv85v3f9886vc5hgaisr0yvai"; depends=[data_table emdbook fastseg GenomeInfoDb GenomicRanges gtools IRanges KernSmooth limma mclust qvalue R_utils Rcpp Rhtslib Rsamtools rtracklayer S4Vectors zlibbioc]; }; + methylMnM = derive2 { name="methylMnM"; version="1.16.0"; sha256="0lq1kgliyy1q48csgc9bprapy9va5kpqlpm87wq4d967a5q0ja5h"; depends=[edgeR statmod]; }; + methylPipe = derive2 { name="methylPipe"; version="1.12.0"; sha256="076z90fmzkp9j4xdlr2amif8kkdmmkh0jcvs384207if09w9i4v9"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicRanges gplots Gviz IRanges marray Rsamtools S4Vectors SummarizedExperiment]; }; + methylumi = derive2 { name="methylumi"; version="2.24.1"; sha256="05hwixscc79hbjx7g94nkrwk26zjf156dlvhgfjr890zn4mj709c"; depends=[annotate AnnotationDbi Biobase BiocGenerics FDb_InfiniumMethylation_hg19 genefilter GenomeInfoDb GenomicRanges ggplot2 illuminaio IRanges lattice matrixStats minfi reshape2 S4Vectors scales SummarizedExperiment]; }; + methyvim = derive2 { name="methyvim"; version="1.0.0"; sha256="1hz6c4bdgslxrbkr0q9fx6ffrrilxcanm8f5alady5qndm4vmiw1"; depends=[BiocGenerics BiocParallel bumphunter cluster doFuture dplyr future GenomeInfoDb ggplot2 gridExtra gtools IRanges limma magrittr minfi SummarizedExperiment superheat tmle wesanderson]; }; + mfa = derive2 { name="mfa"; version="1.0.0"; sha256="17mwf4p4cr4xz1g32p4j0jaxvzfvjzilyrl9nv686nr7cplgkbgp"; depends=[Biobase coda dplyr ggmcmc ggplot2 magrittr MCMCglmm MCMCpack Rcpp tibble]; }; + mgsa = derive2 { name="mgsa"; version="1.26.0"; sha256="087hmvrrd5x1s6198g9q8nwrpd36zywg39dl4l6x8qkr7zgjzakb"; depends=[gplots]; }; + miRBaseConverter = derive2 { name="miRBaseConverter"; version="1.0.0"; sha256="0nx31s6lq6270qj0lx0f8f14959vwhfcyzs1n9h3rs0jwagr41kx"; depends=[]; }; + miRLAB = derive2 { name="miRLAB"; version="1.8.0"; sha256="0fj96h1xan56sc71ycc4c5b2q7chncsknmdlj318lz95mydbiwdv"; depends=[energy entropy glmnet gplots Hmisc httr impute limma pcalg RCurl Roleswitch stringr]; }; + miRNAmeConverter = derive2 { name="miRNAmeConverter"; version="1.6.0"; sha256="1chsigqmfxajd8gll2rq7ccbrsgp9k0cddn4ds4zkiiz6a79iiww"; depends=[AnnotationDbi DBI miRBaseVersions_db]; }; + miRNApath = derive2 { name="miRNApath"; version="1.38.0"; sha256="11137kg0a1l8z2aiz6qisg1gq21rpgzhwr4z8dg0bkh9137jwnx8"; depends=[]; }; + miRNAtap = derive2 { name="miRNAtap"; version="1.12.0"; sha256="0lq3kvs6ri9pdjxwl2hyvdymcnx33avgw7mfg1h6q7dfx0icwiw2"; depends=[AnnotationDbi DBI plyr RSQLite sqldf stringr]; }; + miRcomp = derive2 { name="miRcomp"; version="1.8.0"; sha256="1fxmkn5vp0szjjb0cl8vmaz411x7m10krs4j8dkvlnfhzlqhar96"; depends=[Biobase KernSmooth miRcompData]; }; + miRmine = derive2 { name="miRmine"; version="1.0.0"; sha256="09sxjj2pj4s03dqqphywyhvmk3q2gvdn2nph5nplqwny6q9m2i1v"; depends=[SummarizedExperiment]; }; + miRsponge = derive2 { name="miRsponge"; version="1.2.0"; sha256="0c3213hpf78ynqlaj12p0j9172gvlrhrx4rn4kmr6g1ja9xk80k7"; depends=[clusterProfiler corpcor DOSE igraph ProNet ReactomePA survival varhandle]; }; + microRNA = derive2 { name="microRNA"; version="1.36.0"; sha256="0mc81fy9y3jgc3ll074ksmw72d8yp29pyaankn3na24r96lfcxnj"; depends=[Biostrings]; }; + microbiome = derive2 { name="microbiome"; version="1.0.0"; sha256="13hfia6y1bnzx68gkbb9jhpg9m4mbjn6js69zmhg68c3s7l7s1lk"; depends=[dplyr ggplot2 phyloseq reshape2 tidyr vegan]; }; + mimager = derive2 { name="mimager"; version="1.2.0"; sha256="14r0h676nhsbg175hj7jmkp1ny5wfhykmy2jm2s9qgdsfrgacgv2"; depends=[affy affyPLM Biobase BiocGenerics DBI gtable oligo oligoClasses preprocessCore S4Vectors scales]; }; + minet = derive2 { name="minet"; version="3.36.0"; sha256="1ig9kwh7fvhpglxkda9l5nkaz3rmhl6bc006h6mrz9hl130vmnn8"; depends=[infotheo]; }; + minfi = derive2 { name="minfi"; version="1.24.0"; sha256="1pk5savz9ziarx2iajqnck4vjmh3bnrmzy5m06vx3vmcww46ddi7"; depends=[beanplot Biobase BiocGenerics Biostrings bumphunter data_table genefilter GenomeInfoDb GenomicRanges GEOquery illuminaio IRanges lattice limma MASS matrixStats mclust nlme nor1mix preprocessCore quadprog RColorBrewer reshape S4Vectors siggenes SummarizedExperiment]; }; + mirIntegrator = derive2 { name="mirIntegrator"; version="1.8.0"; sha256="05z8yq7jl3s3i3p9b6p7b16hrshg69gmfs0f67xq0svfb3fqpm85"; depends=[AnnotationDbi ggplot2 graph org_Hs_eg_db Rgraphviz ROntoTools]; }; + missMethyl = derive2 { name="missMethyl"; version="1.12.0"; sha256="1fvpny7x56l55zhgabm6al2i2n0hix7fp7d01bzirsn7chxpwny3"; depends=[AnnotationDbi BiasedUrn GO_db IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest limma methylumi minfi org_Hs_eg_db ruv statmod stringr]; }; + mitoODE = derive2 { name="mitoODE"; version="1.16.0"; sha256="11kyihynbl3kcrngv8dhiqn3ghpkvv0xi35pf8np2p41zdhbrpyv"; depends=[KernSmooth MASS minpack_lm mitoODEdata]; }; + mogsa = derive2 { name="mogsa"; version="1.12.2"; sha256="0a29q9jak4vr05ngh2pcsfifa9i6p086acjk2qrzwnc3lcfm00bm"; depends=[Biobase BiocGenerics cluster corpcor genefilter gplots graphite GSEABase svd]; }; + monocle = derive2 { name="monocle"; version="2.6.1"; sha256="1s3g488jyb0lbdsx4jkpzfl47kpcrnmn2n3bi85if1jmgvlxahvv"; depends=[Biobase BiocGenerics biocViews cluster combinat DDRTree densityClust dplyr fastICA ggplot2 HSMMSingleCell igraph irlba limma MASS Matrix matrixStats pheatmap plyr proxy qlcMatrix RANN Rcpp reshape2 Rtsne slam stringr tibble VGAM viridis]; }; + mosaics = derive2 { name="mosaics"; version="2.16.0"; sha256="08q48zakyfydrj8vix3a5w0j4ix5h1hpqccv0jxgj55gpdc062kj"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges lattice MASS Rcpp Rsamtools S4Vectors]; }; + motifRG = derive2 { name="motifRG"; version="1.22.0"; sha256="193zl2rlzwxv9p9q5i7rilj3w05ndqfyp9bdpvagp5s5cin4hf44"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 IRanges seqLogo XVector]; }; + motifStack = derive2 { name="motifStack"; version="1.22.2"; sha256="05kbp0j0hqpx22fn47r4fcws3hgv5j0496n5srwz1qdlm10igs23"; depends=[ade4 Biostrings grImport htmlwidgets MotIV scales XML]; }; + motifbreakR = derive2 { name="motifbreakR"; version="1.8.0"; sha256="1jfff6jgvrylhnpyc5zq1fah33xq8vf7hypv22vg7js6m8bmcx5j"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges grImport Gviz IRanges matrixStats MotifDb motifStack rtracklayer S4Vectors stringr TFMPvalue VariantAnnotation]; }; + motifcounter = derive2 { name="motifcounter"; version="1.2.1"; sha256="1k47yca1w59w0k7w4cxahhq4r2jyb8vflpzmrl7wnypb4lf9mbc0"; depends=[Biostrings]; }; + motifmatchr = derive2 { name="motifmatchr"; version="1.0.1"; sha256="0a7hg307f274n8vxknl0381xpvgphsim07pk7dnh0af3a63lh2ji"; depends=[Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp RcppArmadillo Rsamtools S4Vectors SummarizedExperiment TFBSTools]; }; + mpra = derive2 { name="mpra"; version="1.0.0"; sha256="11lb626w779hawfl06n85mfm0ld8p46ns6s67fkxcxggr4rbkh82"; depends=[BiocGenerics limma S4Vectors scales statmod SummarizedExperiment]; }; + msPurity = derive2 { name="msPurity"; version="1.4.0"; sha256="105z60rdflpz0j9ckrwc7dpywh9v3lqwbs4adwlrvziz87ah29al"; depends=[DBI doSNOW fastcluster foreach ggplot2 mzR plyr Rcpp reshape2 RSQLite stringr]; }; + msa = derive2 { name="msa"; version="1.10.0"; sha256="15czlzssrxsgjckxy6ckphfcyj2q12iq5q86238xj16wfqphax45"; depends=[BiocGenerics Biostrings IRanges Rcpp S4Vectors]; }; + msgbsR = derive2 { name="msgbsR"; version="1.2.0"; sha256="0gnv5gk9as3gn85gwgs8agrvzk5948wiwa685xjpwz359vbqnxrs"; depends=[BSgenome easyRNASeq edgeR GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr R_utils Rsamtools S4Vectors SummarizedExperiment]; }; + msmsEDA = derive2 { name="msmsEDA"; version="1.16.0"; sha256="1d7h4q8dbiv6p7sfslfmhjhrfr3fkjwl82gvb1179wb8qm3qkgwc"; depends=[gplots MASS MSnbase RColorBrewer]; }; + msmsTests = derive2 { name="msmsTests"; version="1.16.0"; sha256="0gy8y6ca57j7gqp69r008802gfpkay56k4aigy04xij1jd17abx7"; depends=[edgeR msmsEDA MSnbase qvalue]; }; + multiClust = derive2 { name="multiClust"; version="1.8.2"; sha256="01kidj4ggv26981b411vf4lsa61pghb4d56j6nr88r87rja9mn2l"; depends=[amap cluster ctc dendextend mclust survival]; }; + multiMiR = derive2 { name="multiMiR"; version="1.1.0"; sha256="0zl1m62j9gdb11n4xp2piw36ildjvs5z2gw7f3sdjbkdl6jvsgwz"; depends=[AnnotationDbi BiocGenerics dplyr purrr RCurl tibble XML]; }; + multiOmicsViz = derive2 { name="multiOmicsViz"; version="1.2.0"; sha256="1zqlgz2iprwqnib9hsxynygnvwb0mqn4zbgbqrj7nsxsd5qsad51"; depends=[doParallel foreach SummarizedExperiment]; }; + multiscan = derive2 { name="multiscan"; version="1.38.0"; sha256="07fb0a7kn8bjvq9cx4dvdjrf92830vwpz5n31mgk58aw3vg3mz66"; depends=[Biobase]; }; + multtest = derive2 { name="multtest"; version="2.34.0"; sha256="0n11rd49xl2vn3ldmfips7d3yb70l8npjcqsxyswr9ypjhgzkv9j"; depends=[Biobase BiocGenerics MASS survival]; }; + muscle = derive2 { name="muscle"; version="3.20.0"; sha256="16kawdvm08hag2kghdn438z0ysby67p989v3xlcf9r8f62isw6b7"; depends=[Biostrings]; }; + mvGST = derive2 { name="mvGST"; version="1.12.0"; sha256="12fm1xgini0l5x2xbp9qkxigdvii7yjdwww420bn7ymz4z97865c"; depends=[annotate AnnotationDbi GO_db GOstats gProfileR graph Rgraphviz stringr topGO]; }; + mygene = derive2 { name="mygene"; version="1.14.0"; sha256="0qqkpsqk99575rc49kj7s5yl22jb96gmk47i5lm700qi4v9fyim4"; depends=[GenomicFeatures Hmisc httr jsonlite plyr S4Vectors sqldf]; }; + myvariant = derive2 { name="myvariant"; version="1.8.0"; sha256="1r4hqy5jz4xqswj3pfzxmncjapjmcksbx428f7lfncj844198g1q"; depends=[GenomeInfoDb Hmisc httr jsonlite magrittr plyr S4Vectors VariantAnnotation]; }; + mzID = derive2 { name="mzID"; version="1.16.0"; sha256="0yk70dka56zd8w62f03ggx3mandj91gfa767h9ajj0sd3mjmfqb9"; depends=[doParallel foreach iterators plyr ProtGenerics XML]; }; + mzR = derive2 { name="mzR"; version="2.12.0"; sha256="1x3gp30sfxz2v3k3swih9kff9b2rvk7hzhnlkp6ywlnn2wgb0q8c"; depends=[Biobase BiocGenerics ProtGenerics Rcpp zlibbioc]; }; + ncdfFlow = derive2 { name="ncdfFlow"; version="2.24.0"; sha256="1rvqlfzdbqz7a035c2d0rfziail71pvyla6fi3mv1xzrm2vpw0b8"; depends=[BH Biobase BiocGenerics flowCore flowViz Rcpp RcppArmadillo Rhdf5lib zlibbioc]; }; + ndexr = derive2 { name="ndexr"; version="1.0.3"; sha256="05wnjya61w0mbskrfs9k5w04pr3hcf4c8w15y85z7j1vxjhpgwjq"; depends=[httr igraph jsonlite plyr tidyr]; }; + nem = derive2 { name="nem"; version="2.52.0"; sha256="0114b8nzv07gii87rdcvia6n7jn203f5whx6x6x54ijxq8m1fkk8"; depends=[boot e1071 graph limma plotrix RBGL RColorBrewer Rgraphviz statmod]; }; + netReg = derive2 { name="netReg"; version="1.2.0"; sha256="1cmh66m5zp1awrg79f8d09b48shq8hyjvkz6mfxrnvqbcj32v8ph"; depends=[Rcpp RcppArmadillo]; }; + netbenchmark = derive2 { name="netbenchmark"; version="1.10.0"; sha256="173jmvslg8vj078psnvk6s4sns8n9zv2z8hkq6iq64pavmn9cf91"; depends=[c3net corpcor fdrtool GeneNet grndata Matrix minet PCIT pracma randomForest Rcpp]; }; + netbiov = derive2 { name="netbiov"; version="1.12.0"; sha256="1xxqrpjsn6pc097d4c1389gn80404pxjxzsm5zz4bcfk30lr5w3l"; depends=[igraph]; }; + nethet = derive2 { name="nethet"; version="1.10.0"; sha256="1ssmjgxmsyzwhsnpq263q3vmspg74xzin6bny3y9icvs8x893mbp"; depends=[CompQuadForm GeneNet ggm ggplot2 glasso glmnet GSA huge ICSNP limma mclust multtest mvtnorm network parcor]; }; + netprioR = derive2 { name="netprioR"; version="1.4.0"; sha256="1cppds5a3d8fs4wbfj2asc24ksxk27718gwyyy5hgigy7zx9z4h3"; depends=[doParallel dplyr foreach ggplot2 gridExtra Matrix pROC sparseMVN]; }; + netresponse = derive2 { name="netresponse"; version="1.38.0"; sha256="131xbpkaglnspa2zxq49qwn2nnphlh1ly5s5hx8p9a0da2ccspas"; depends=[dmt ggplot2 graph igraph mclust minet plyr qvalue RColorBrewer reshape2 Rgraphviz]; }; + networkBMA = derive2 { name="networkBMA"; version="2.18.0"; sha256="04rkhi1iiwygilzmfbwsd2acg7cvpmdrli6qb0a0wi1g0yx7k95a"; depends=[BH BMA leaps Rcpp RcppArmadillo RcppEigen]; }; + nnNorm = derive2 { name="nnNorm"; version="2.42.0"; sha256="0dm1h989vkimcf51glqjc1lqiaq28cgym82m99afcisinldnwlhr"; depends=[marray nnet]; }; + nondetects = derive2 { name="nondetects"; version="2.8.0"; sha256="0x06jz8gw97nks84y7pkgqm8p1jqdfgpxcrk48q8pdnc2flaq4a0"; depends=[Biobase HTqPCR limma mvtnorm]; }; + normalize450K = derive2 { name="normalize450K"; version="1.6.0"; sha256="0cdcl7jp9hhk2dkwhyrzxg8f768r3llfi3vy5a5ppann9016nxp6"; depends=[Biobase illuminaio quadprog]; }; + normr = derive2 { name="normr"; version="1.4.0"; sha256="0g1f623f1rzsp7ywm2434gcvws4biziav76iliir5g10zafgw6vc"; depends=[bamsignals GenomeInfoDb GenomicRanges IRanges qvalue Rcpp rtracklayer]; }; + npGSEA = derive2 { name="npGSEA"; version="1.14.0"; sha256="0v99nirx9j4dpfsb1ihyhj7iwy7hkxda6bf0l3326mi13xy2jirb"; depends=[Biobase BiocGenerics GSEABase]; }; + nucleR = derive2 { name="nucleR"; version="2.10.0"; sha256="047ny4dm6x45hsagznwibrq6i3rycvvwmxl8hgh1c2phl87njpbi"; depends=[Biobase BiocGenerics GenomicRanges IRanges Rsamtools S4Vectors ShortRead]; }; + nucleoSim = derive2 { name="nucleoSim"; version="1.6.0"; sha256="0gyxb4ydhx3igxddp4jh9qg9787bv1lk8dyahq7y96jv4qmmw65k"; depends=[IRanges S4Vectors]; }; + nudge = derive2 { name="nudge"; version="1.44.0"; sha256="1yp2x6hdn6vhvy922f4d74zyw2n5shrhlpxiig50hwd8dar2nn5f"; depends=[]; }; + occugene = derive2 { name="occugene"; version="1.38.0"; sha256="1lwf3kv171lapk4lk8v33996rjb54q3w4dbdn1b64vlcgw5586ip"; depends=[]; }; + odseq = derive2 { name="odseq"; version="1.6.0"; sha256="15qlapq5vp3s99888kmmabvkl0vx507qkkh7v9a9zd7algz5shwj"; depends=[kebabs mclust msa]; }; + oligo = derive2 { name="oligo"; version="1.42.0"; sha256="1rjnsr3h4bi3bjv580iv2rfs9c062qyilm9xxkk3rx2l0ylih05y"; depends=[affxparser affyio Biobase BiocGenerics Biostrings DBI ff oligoClasses preprocessCore RSQLite zlibbioc]; }; + oligoClasses = derive2 { name="oligoClasses"; version="1.40.0"; sha256="0xly40mz55z0lis2b1zh3nhyf5qw2d8qlrm6n51hz49y0bqjssr9"; depends=[affyio Biobase BiocGenerics BiocInstaller Biostrings DBI ff foreach GenomicRanges IRanges RSQLite S4Vectors SummarizedExperiment]; }; + omicRexposome = derive2 { name="omicRexposome"; version="1.0.1"; sha256="13bjic4msqpjh0llqa0fs4nzmskf0h97mi614n458c3109bscdjk"; depends=[Biobase ggplot2 ggrepel gridExtra isva limma MultiDataSet omicade4 PMA rexposome SmartSVA stringr SummarizedExperiment sva]; }; + omicade4 = derive2 { name="omicade4"; version="1.18.0"; sha256="0f83c907lbqw0idzrxl5a7hb4r9ginrj4798ymfkgc2m6a5x1w46"; depends=[ade4 made4]; }; + oncomix = derive2 { name="oncomix"; version="1.0.0"; sha256="015sgiagij3pzxvcqygbby1rsl8ximmwpd09lb50w95xa1ks466z"; depends=[ggplot2 ggrepel mclust RColorBrewer SummarizedExperiment]; }; + oneChannelGUI = derive2 { name="oneChannelGUI"; version="1.41.0"; sha256="0hx5s3y9zgx41p516q9w09crkihyn8hckwmf8jzxj7llrplc3dm1"; depends=[affylmGUI Biobase Biostrings chimera IRanges Rsamtools siggenes tkrplot tkWidgets]; }; + oneSENSE = derive2 { name="oneSENSE"; version="1.0.0"; sha256="0jq4affxz5jr6pn01cz0cwbl1f930v63pzswz787m7lv7bvvbnl4"; depends=[flowCore gplots plotly Rtsne scatterplot3d shiny shinyFiles webshot]; }; + ontoCAT = derive2 { name="ontoCAT"; version="1.29.0"; sha256="057sbc0s08i22gjg886ngz0k59r4v29ssh11qj0wyv4n5g3zs0hg"; depends=[rJava]; }; + ontoProc = derive2 { name="ontoProc"; version="1.0.0"; sha256="0la7lcynmdgavvzdz7b5g726pm4205r8194dnsmnhc5h3lryr36k"; depends=[AnnotationDbi Biobase ontologyIndex S4Vectors shiny]; }; + openCyto = derive2 { name="openCyto"; version="1.16.1"; sha256="1qzx0qq1d2hi5whqi0kbg8xmjbglv6j2fli3wcx932g66lxwg3sv"; depends=[Biobase clue data_table flowClust flowCore flowStats flowViz flowWorkspace graph gtools ks lattice MASS ncdfFlow plyr R_utils RBGL RColorBrewer Rcpp rrcov]; }; + openPrimeR = derive2 { name="openPrimeR"; version="1.0.0"; sha256="0x4h7lcanzclcxnbrj2hii5mpv2b7rm5izm9p51drqylr69gvns2"; depends=[ape BiocGenerics Biostrings DECIPHER digest distr distrEx dplyr fitdistrplus foreach GenomicRanges ggplot2 Hmisc IRanges lpSolveAPI magrittr openxlsx plyr RColorBrewer reshape2 S4Vectors scales seqinr stringdist stringr uniqtag XML]; }; + openPrimeRui = derive2 { name="openPrimeRui"; version="1.0.0"; sha256="1mchbalmq6mbxp9mdrmndz3pja7j1ffx5xglnzglfdqm2004gdlf"; depends=[DT openPrimeR rmarkdown shiny shinyBS shinyjs]; }; + oposSOM = derive2 { name="oposSOM"; version="1.16.0"; sha256="1855wrszaxwc8rghhn1hgj6hrp5mxsyffbs9ccjckq5jl3z7z1mj"; depends=[ape arules Biobase biomaRt fastICA fdrtool igraph pixmap scatterplot3d som tsne]; }; + oppar = derive2 { name="oppar"; version="1.6.0"; sha256="0h4wfgjq8xm5f6bcaj5vxy686ymr42r3ig9zw93ayycpfl81p275"; depends=[Biobase GSEABase GSVA]; }; + pRoloc = derive2 { name="pRoloc"; version="1.18.0"; sha256="0syqcpfwm7bxk7jzr988zx91m7ny4aiy9rc286xakd4snl4vafc0"; depends=[Biobase BiocGenerics BiocParallel biomaRt caret class dendextend e1071 FNN ggplot2 gtools hexbin kernlab knitr lattice MASS mclust MLInterfaces MSnbase mvtnorm nnet plyr proxy randomForest RColorBrewer Rcpp RcppArmadillo Rtsne sampling scales]; }; + pRolocGUI = derive2 { name="pRolocGUI"; version="1.12.0"; sha256="0d4gv7nkwh8wbgdx37gwg4c29704q3z811cwwxdpx3gdgsa1iizw"; depends=[Biobase dplyr DT ggplot2 MSnbase pRoloc scales shiny]; }; + paircompviz = derive2 { name="paircompviz"; version="1.16.0"; sha256="1yw27k417zcbx2dji8hjw6g1qcp8762k2c9j7gddfck7k7qjf1jc"; depends=[Rgraphviz]; }; + pandaR = derive2 { name="pandaR"; version="1.10.0"; sha256="0x7mandjc2dk020pq8733wshzszrav3i29iq74pnp13dfrz4zb92"; depends=[Biobase BiocGenerics ggplot2 hexbin igraph matrixStats plyr reshape RUnit]; }; + panelcn_mops = derive2 { name="panelcn.mops"; version="1.0.0"; sha256="0wg88axsgmrsihib7yc1xgm45q5d9dgikqvqncn7fx59i81f6l6c"; depends=[cn_mops GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; }; + panp = derive2 { name="panp"; version="1.48.0"; sha256="1pfajph1wzwww2w9djpkb8rwszjcb0hink81fy27js3ppzm3cc7l"; depends=[affy Biobase]; }; + parglms = derive2 { name="parglms"; version="1.10.0"; sha256="11gxwv274g6fyz3ckl6l7wrzx229zgdparlplb7niz63cqqhggn5"; depends=[BatchJobs BiocGenerics doParallel foreach]; }; + parody = derive2 { name="parody"; version="1.36.0"; sha256="073prpjv5hf2y0864gzjj4c0hlncw81nw877f0yykskpq72df38i"; depends=[]; }; + pathRender = derive2 { name="pathRender"; version="1.46.0"; sha256="11q5nbscf1zcpw437vp12vx7n80dm3m3nymc7r79hbz3idpn16bp"; depends=[AnnotationDbi cMAP graph RColorBrewer Rgraphviz]; }; + pathVar = derive2 { name="pathVar"; version="1.8.0"; sha256="1l8544smgrfqavpv1xjwxj2mv8m8jgp50basylkamg1q1098l1h6"; depends=[data_table EMT ggplot2 gridExtra Matching mclust]; }; + pathifier = derive2 { name="pathifier"; version="1.16.0"; sha256="0sr8fnp5i2f38cnxsa3lag60ibjzp169yml55jay2gc0br6bsjm7"; depends=[princurve R_oo]; }; + pathprint = derive2 { name="pathprint"; version="1.6.0"; sha256="0f2icjqxw4q3zgkr71836xhvad488w21xjwy62c2cnh9zbmm47wj"; depends=[]; }; + pathview = derive2 { name="pathview"; version="1.18.2"; sha256="1jspjwf919gifwqx29wgsjfyrdwp6a1i7ip444gcqz9i7crpfwvz"; depends=[AnnotationDbi graph KEGGgraph KEGGREST org_Hs_eg_db png Rgraphviz XML]; }; + paxtoolsr = derive2 { name="paxtoolsr"; version="1.12.0"; sha256="09djd4ix6abljqv70k89p6slghi2y6phyy679f2dsyqn8cmhlp8s"; depends=[data_table httr igraph jsonlite plyr R_utils rJava rjson XML]; }; + pbcmc = derive2 { name="pbcmc"; version="1.6.0"; sha256="123bijvnq29b9sc2wa9a887wdk8223bn26bv64pmrv97qnkvfarg"; depends=[Biobase BiocGenerics BiocParallel cowplot genefu ggplot2 gridExtra limma reshape2]; }; + pcaExplorer = derive2 { name="pcaExplorer"; version="2.4.0"; sha256="1z8nahkz13v86k1c89nypxjxwawds1b4r7inbzns20g61caxxxnc"; depends=[AnnotationDbi biomaRt d3heatmap DESeq2 DT genefilter GenomicRanges ggplot2 ggrepel GO_db GOstats IRanges knitr limma NMF pheatmap plyr rmarkdown S4Vectors scales shiny shinyAce shinyBS shinydashboard SummarizedExperiment threejs tidyr topGO]; }; + pcaGoPromoter = derive2 { name="pcaGoPromoter"; version="1.22.0"; sha256="0371ns6702nk5s3pj59z04i2sjf24sj0wm3m4rj67q4p5v7v1ksz"; depends=[AnnotationDbi Biostrings ellipse]; }; + pcaMethods = derive2 { name="pcaMethods"; version="1.70.0"; sha256="0ii235g0x0492kh8cfrf28ni0b6vd6fh7kizkqmczzqggd6b1bk8"; depends=[Biobase BiocGenerics MASS Rcpp]; }; + pcot2 = derive2 { name="pcot2"; version="1.46.0"; sha256="1pymhr9ypp5g27bbnayrz4ks8rg5j634bf4l596m2b6c4q9d9rc5"; depends=[amap Biobase]; }; + pcxn = derive2 { name="pcxn"; version="1.0.0"; sha256="105mzgy6bcwmk1nsnlr44bik8pazyjc7zcqn56732g1dj5na5v5w"; depends=[pcxnData pheatmap]; }; + pdInfoBuilder = derive2 { name="pdInfoBuilder"; version="1.42.0"; sha256="0cs47qzkpphixcwn3fl9pfrw1qans8y51y8lb9phikh4s8cdq061"; depends=[affxparser Biobase BiocGenerics Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; + pdmclass = derive2 { name="pdmclass"; version="1.47.0"; sha256="1grc1fyn8yhwixi7638bsyb3zc6zhzzrbfh4hcpqk6gf653dls63"; depends=[Biobase fibroEset mda]; }; + pepStat = derive2 { name="pepStat"; version="1.12.0"; sha256="0bnak90zfycd5a9qkz4lhwk4h61pr0pwn3hzaksxcv6c025h0mwm"; depends=[Biobase data_table fields GenomicRanges ggplot2 IRanges limma plyr]; }; + pepXMLTab = derive2 { name="pepXMLTab"; version="1.12.0"; sha256="062bgkdqmp1hqibdar3x3lq1vdkpds9xzadq6fivj0iyx4lwpsl0"; depends=[XML]; }; + pgca = derive2 { name="pgca"; version="1.2.0"; sha256="16v1fdw3abbxh5jmrsam8mhhamhjgkwmx7i16d2kxsybxp3k4zrb"; depends=[]; }; + phenoDist = derive2 { name="phenoDist"; version="1.26.0"; sha256="0mhk918cbk6zg6acs7fzvpy2fkj9gdj0acx5mfzvvypahlfbf1za"; depends=[e1071 imageHTS]; }; + phenoTest = derive2 { name="phenoTest"; version="1.26.0"; sha256="0wl1b9g5wlqzjll1kvgl29fl1qg6dqj9qwz5wfdhkvpxh43z4pyb"; depends=[annotate AnnotationDbi Biobase biomaRt BMA Category ellipse genefilter ggplot2 gplots GSEABase Heatplus hgu133a_db Hmisc hopach HTSanalyzeR limma mgcv SNPchip survival xtable]; }; + phenopath = derive2 { name="phenopath"; version="1.2.0"; sha256="150yqs7p63baxg713rh2qhbbg78d58wfmmsk3nqbspm4nk7kl458"; depends=[dplyr ggplot2 Rcpp SummarizedExperiment tibble tidyr]; }; + philr = derive2 { name="philr"; version="1.4.0"; sha256="1b6fvhpdp1wd20sdb72a3mxyrvdxvmsjp99f0hnpvnb1yfnjcm7r"; depends=[ape ggplot2 ggtree phangorn tidyr]; }; + phosphonormalizer = derive2 { name="phosphonormalizer"; version="1.2.0"; sha256="1l0zrrah3p602g61jy5gh9bnv6qi26klwzvfs6c47z3dpsp7ikzy"; depends=[matrixStats plyr]; }; + phyloseq = derive2 { name="phyloseq"; version="1.22.3"; sha256="0djy250cnzvjbb1psxwi4ffsb5yszsk54ma540nw0s7bbqy83pn0"; depends=[ade4 ape Biobase BiocGenerics biomformat Biostrings cluster data_table foreach ggplot2 igraph multtest plyr reshape2 scales vegan]; }; + piano = derive2 { name="piano"; version="1.18.1"; sha256="11da6z1xsk1r89ggh299yp5d3b4xw3nmmvj0lx6wf1liai4jss06"; depends=[Biobase BiocGenerics fgsea gplots igraph marray relations]; }; + pickgene = derive2 { name="pickgene"; version="1.50.0"; sha256="14wgfjnpa1fnnvf0rrfil556ixdsicfyd3yvs7wwsri42vwixgl9"; depends=[MASS]; }; + pint = derive2 { name="pint"; version="1.28.0"; sha256="0lz5svmm5gqxqcjic4689d07wkbndbszscs25cdm690wdgkvj5bm"; depends=[dmt Matrix mvtnorm]; }; + pkgDepTools = derive2 { name="pkgDepTools"; version="1.44.0"; sha256="0s1zwh8dl8lm99avk3kd88kk5x9s1hmal7aqmc0psw57gxid91qq"; depends=[graph RBGL]; }; + plateCore = derive2 { name="plateCore"; version="1.36.0"; sha256="02h42k6aivmchapa9bl5dxpl37706p31ky4a1hr48yfgacr750sn"; depends=[Biobase flowCore flowStats flowViz lattice latticeExtra MASS robustbase]; }; + plethy = derive2 { name="plethy"; version="1.16.0"; sha256="027z64s0dcyvyzjmggz0s5jas3zcx7ckp2rs6190dp16hrldqrmc"; depends=[Biobase BiocGenerics DBI ggplot2 IRanges plyr RColorBrewer reshape2 RSQLite S4Vectors Streamer]; }; + plgem = derive2 { name="plgem"; version="1.50.0"; sha256="0sgxppvjiqraw292d1kxwl2lwb6sd1ck1w560q299sp78zsnsaan"; depends=[Biobase MASS]; }; + plier = derive2 { name="plier"; version="1.48.0"; sha256="0n0mj5cwgpqgdlmyhifwb66yp3m3j610f8xs4bkhpk36x9b8bbvx"; depends=[affy Biobase]; }; + plrs = derive2 { name="plrs"; version="1.18.0"; sha256="0y98vknq7052vsapd7wjihczbrfhvnckhxy80sxslbryh3nsmbfs"; depends=[Biobase BiocGenerics CGHbase ic_infer marray quadprog Rcsdp]; }; + plw = derive2 { name="plw"; version="1.38.0"; sha256="1mys9rslhc3rb23wbvlnxwl4dcca2m395bxfg7i4217hvzai7b25"; depends=[affy MASS]; }; + pmm = derive2 { name="pmm"; version="1.10.0"; sha256="1bzmh0p0c649sqp1lhz8zdqh4k7b3n78akgn2wlhawjbx3lb5f6i"; depends=[lme4]; }; + podkat = derive2 { name="podkat"; version="1.10.0"; sha256="0c93gnrcw8rwq9r4f7kkpsdjflarwixjpadaa05w98vqa9x5ycc4"; depends=[Biobase BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp Rsamtools]; }; + polyester = derive2 { name="polyester"; version="1.14.0"; sha256="1pxlkncfnrd15l1n4j5mj04in9pr6fxmxcwlrsqrqn58x4hk4kxs"; depends=[Biostrings IRanges limma logspline S4Vectors zlibbioc]; }; + ppiStats = derive2 { name="ppiStats"; version="1.44.0"; sha256="14xrvcfbp177mpdlzi2kxmv0v9j93i4r1xsw06fr3gw9a7l6zg3r"; depends=[Biobase Category graph lattice ppiData RColorBrewer ScISI]; }; + pqsfinder = derive2 { name="pqsfinder"; version="1.6.3"; sha256="0rf0sjd1gsdvn1qilckp5y9vb7j3wgs9h12gcxcjfrcaax8b3h6h"; depends=[BH Biostrings GenomicRanges IRanges Rcpp S4Vectors]; }; + prada = derive2 { name="prada"; version="1.54.0"; sha256="19f8h411mzbrim1wvncr7wa3ah0qc1vy9kzcbx64pcif2xfb5qin"; depends=[Biobase BiocGenerics MASS RColorBrewer rrcov]; }; + prebs = derive2 { name="prebs"; version="1.18.0"; sha256="0ss2rij3lv45d4va4dcpmclyaqmkjwk9hyppylkwlvcbgf0ng8xf"; depends=[affy Biobase GenomeInfoDb GenomicAlignments GenomicRanges IRanges RPA S4Vectors]; }; + predictionet = derive2 { name="predictionet"; version="1.24.0"; sha256="10ki86jp7a4dim849zf5pbvd7bgbil8299xl08akyqf7pl37j2qj"; depends=[catnet igraph MASS penalized RBGL]; }; + preprocessCore = derive2 { name="preprocessCore"; version="1.40.0"; sha256="0mrdgbkb9dcfr9gsqyxfpshnxx60mq97pl98b8yl00l2gfwz48ph"; depends=[]; }; + proBAMr = derive2 { name="proBAMr"; version="1.12.0"; sha256="1arql2f4f6zjsqrshdqmbz8vlvydb5v66q0qa7rmdlz9hj9smahk"; depends=[AnnotationDbi Biostrings GenomicFeatures GenomicRanges IRanges rtracklayer]; }; + proFIA = derive2 { name="proFIA"; version="1.4.0"; sha256="0psn21jsrqplgwjisbfzqrfwiqcy45cwi04pmg1w1dw1bbwmjjzp"; depends=[Biobase BiocParallel minpack_lm missForest pracma ropls xcms]; }; + procoil = derive2 { name="procoil"; version="2.6.0"; sha256="0ijqarp7rgszja1yymancygqcxsxw6cg4ydxzipw1wk6a3gl71ck"; depends=[Biostrings kebabs S4Vectors]; }; + profileScoreDist = derive2 { name="profileScoreDist"; version="1.6.0"; sha256="0grw3386czykfq1yxrvqbph9l1xs4hpxb8hx0fjsd0v3mhvgkbk9"; depends=[BiocGenerics Rcpp]; }; + progeny = derive2 { name="progeny"; version="1.0.0"; sha256="1ijhqsk6k70dmkkwxl003r9rcmx7j16z4i8fxjhxnx5d8g3swib9"; depends=[Biobase]; }; + prot2D = derive2 { name="prot2D"; version="1.16.0"; sha256="1fp530fammi9xifx5g72jz8k7y3chjfg3mpybsbf5pzvva1429sj"; depends=[Biobase fdrtool impute limma MASS Mulcom qvalue samr st]; }; + proteinProfiles = derive2 { name="proteinProfiles"; version="1.18.0"; sha256="069ksj5md9m7zylqwy6pyj3p9pa4j04vn4ss4d2r8n7a5z8f7d1g"; depends=[]; }; + proteoQC = derive2 { name="proteoQC"; version="1.14.0"; sha256="1kv8ah7pbfl1gbb1pnjlmdw5bskfyh0hsn0nxraz0ybvwzn3kdsl"; depends=[dplyr ggplot2 MSnbase Nozzle_R1 plotly plyr reshape2 rmarkdown rpx rTANDEM seqinr tidyr VennDiagram XML]; }; + psichomics = derive2 { name="psichomics"; version="1.4.4"; sha256="1h8vg90nlvjmpz8ific6n41xqc3fzs1133hvbyrjzqbwqy0cgqzp"; depends=[AnnotationHub cluster colourpicker data_table digest dplyr DT edgeR fastICA fastmatch ggplot2 ggrepel highcharter htmltools httr jsonlite limma miscTools pairsD3 plyr R_utils Rcpp shiny shinyBS shinyjs stringr survival XML xtable]; }; + psygenet2r = derive2 { name="psygenet2r"; version="1.10.0"; sha256="0xf03vjyjiz4093cqnvi3dm532scx3f17mcf0av96h052vy10qb7"; depends=[BgeeDB Biobase BiocInstaller biomaRt ggplot2 GO_db igraph labeling RCurl reshape2 stringr topGO]; }; + puma = derive2 { name="puma"; version="3.20.0"; sha256="0pcwppa2zlzpfl5fafl4h5xcf0pnyvz3hkykl192hzp26wcjsc1i"; depends=[affy affyio Biobase mclust oligo oligoClasses]; }; + pvac = derive2 { name="pvac"; version="1.26.0"; sha256="0lmwy5a74ikq0sl6zqw69kag6q3p092qwh1lzvv7rl2j9wm2yl46"; depends=[affy Biobase]; }; + pvca = derive2 { name="pvca"; version="1.18.0"; sha256="1bjv97fq6cpa8j11j0zjpmpxyszr5a2w7z95r47hvqysi1mm7ypv"; depends=[Biobase lme4 Matrix vsn]; }; + pwOmics = derive2 { name="pwOmics"; version="1.10.1"; sha256="02ffzf5hp6mp24pmsivsb8kfarcxqdb7a02narhysp1drccyywzr"; depends=[AnnotationDbi AnnotationHub Biobase BiocGenerics biomaRt data_table GenomicRanges gplots graph igraph rBiopaxParser STRINGdb]; }; + qcmetrics = derive2 { name="qcmetrics"; version="1.16.0"; sha256="1agypdz696i868j7yzispmbljm5vc67zpfc3njq322bvgcfv6j78"; depends=[Biobase knitr Nozzle_R1 pander S4Vectors xtable]; }; + qpcrNorm = derive2 { name="qpcrNorm"; version="1.36.0"; sha256="1lgdlggp4g19d47lv3wr87zj7lc50w433f2j9c7sc5symslqzrp5"; depends=[affy Biobase limma]; }; + qpgraph = derive2 { name="qpgraph"; version="2.12.0"; sha256="10xmdlc2h67krc2bbcpv2sjgv8vqdxn49knzpnn22rvgc3ab5np0"; depends=[annotate AnnotationDbi Biobase BiocParallel GenomeInfoDb GenomicFeatures GenomicRanges graph IRanges Matrix mvtnorm qtl Rgraphviz S4Vectors]; }; + qrqc = derive2 { name="qrqc"; version="1.32.0"; sha256="0p8r78qrrrkmvbvlapwbdzd363y8qmiwmw3aiipmv959cpbsy2ci"; depends=[Biostrings biovizBase brew ggplot2 plyr reshape Rsamtools testthat xtable]; }; + qsea = derive2 { name="qsea"; version="1.4.0"; sha256="00fym964mlzkydmd6mmhd2hsv87lga5zg8cc6dglzwycmbmcb7cr"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges gtools HMMcopy IRanges limma Rsamtools rtracklayer zoo]; }; + quantro = derive2 { name="quantro"; version="1.12.0"; sha256="1vw44c0vr1mx5mc89i864l8d9hjp0pyrv6fdd1kzswzdi02nf8bq"; depends=[Biobase doParallel foreach ggplot2 iterators minfi RColorBrewer]; }; + quantsmooth = derive2 { name="quantsmooth"; version="1.44.0"; sha256="1n0q6mlmsidzw9qifplm9hhcxbx37hb6062mssw1klpmy2x9sfhg"; depends=[quantreg]; }; + qusage = derive2 { name="qusage"; version="2.12.0"; sha256="08x9v602fgdnzff0csiz5nwzmw8ld1z6yy607acncs0hnj16jvcw"; depends=[Biobase limma lsmeans nlme]; }; + qvalue = derive2 { name="qvalue"; version="2.10.0"; sha256="1rd9rnf16kh8wc076kahd9hsb9rfwsbzmz3kjmp0pj6rbiq0051i"; depends=[ggplot2 reshape2]; }; + r3Cseq = derive2 { name="r3Cseq"; version="1.24.0"; sha256="1nahiwz98w788c63d140bjq664dhjmycpkmrcdv4s27hrwpwagz3"; depends=[Biostrings data_table GenomeInfoDb GenomicRanges IRanges qvalue RColorBrewer Rsamtools rtracklayer sqldf VGAM]; }; + rBiopaxParser = derive2 { name="rBiopaxParser"; version="2.18.0"; sha256="1n8vlnxsn1n9c1vpss0zzlr2i088gwf34gjr7kvqmpyyplym51q4"; depends=[data_table XML]; }; + rCGH = derive2 { name="rCGH"; version="1.8.1"; sha256="1dmxijdbvmjspc8p1k04as326p98gyjrkdwrhjnzm5jdxm87jjjb"; depends=[aCGH affy AnnotationDbi DNAcopy GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges lattice limma mclust org_Hs_eg_db plyr shiny TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; }; + rDGIdb = derive2 { name="rDGIdb"; version="1.4.4"; sha256="08hddkq1jpb24gp3id5w0bv48cqzx7h81mvdl0wvjsd8gz31nw2c"; depends=[httr jsonlite]; }; + rGADEM = derive2 { name="rGADEM"; version="2.26.0"; sha256="1rbw8k20ri6jhqn9mgkjzyjp7s1z58bgxd5hb35zcpyd7fb2aifw"; depends=[Biostrings BSgenome IRanges seqLogo]; }; + rGREAT = derive2 { name="rGREAT"; version="1.11.1"; sha256="040pvbnx935f49xgpj3wx64dfsf95f729sb93qmpn74ndpa1f3h6"; depends=[GenomicRanges GetoptLong IRanges RCurl rjson]; }; + rHVDM = derive2 { name="rHVDM"; version="1.44.0"; sha256="1qw4k1xq4qq378dgymxw83ilw6sb2qk3zm6pk15br4v935016vgz"; depends=[affy Biobase minpack_lm R2HTML]; }; + rMAT = derive2 { name="rMAT"; version="3.28.0"; sha256="0cn7ffipgbj2b7vim6l0flw25nn0w7pdzxzz0m41n2jz18rm7203"; depends=[affxparser Biobase BiocGenerics IRanges]; }; + rRDP = derive2 { name="rRDP"; version="1.12.0"; sha256="0iw4hjhvf32ng8bqhqs0b2s882a8fcvpq4wq8ifrj27n5sxjs5gh"; depends=[Biostrings]; }; + rSFFreader = derive2 { name="rSFFreader"; version="0.26.0"; sha256="1a2m567jnb90ra8vk5wagc756h5fahss3hs4xxky1xgacpafyk5k"; depends=[Biostrings IRanges S4Vectors ShortRead XVector]; }; + rTANDEM = derive2 { name="rTANDEM"; version="1.18.0"; sha256="0a6w19kfdg3776iksvw60qyxbrjdvk7d02q5a4kcws1cn73dzpi2"; depends=[data_table Rcpp XML]; }; + rTRM = derive2 { name="rTRM"; version="1.16.0"; sha256="0bckbq0h1iy2vrv3mbzm9bq9r709hgbs240sa2dmf3bwn7329rxh"; depends=[AnnotationDbi DBI igraph RSQLite]; }; + rTRMui = derive2 { name="rTRMui"; version="1.16.0"; sha256="0qx969aivrivccr443jvpvjji3zabp31jgg0cd4ddl5w0gw2i1pm"; depends=[MotifDb org_Hs_eg_db org_Mm_eg_db rTRM shiny]; }; + rain = derive2 { name="rain"; version="1.12.0"; sha256="1nlz4vri4blqk4d7hzh8wsda8viwl80f4vhpfx04sxmsz5i9w305"; depends=[gmp multtest]; }; + rama = derive2 { name="rama"; version="1.52.0"; sha256="1g67sv7hm64m0c8g9z9y2pnxhdlbhpddyg6yx364klkx3gn017hp"; depends=[]; }; + ramwas = derive2 { name="ramwas"; version="1.2.0"; sha256="013gqial7zmalh4y2a97fp6262h3038mr2j3pg71vm7r4ww5q16c"; depends=[BiocGenerics biomaRt Biostrings digest filematrix GenomicAlignments glmnet KernSmooth Rsamtools]; }; + randPack = derive2 { name="randPack"; version="1.24.0"; sha256="1qb7r4f8cjmn4wdpqydbqq75xzzxffqbh28dcfbbymcyvnc0vxma"; depends=[Biobase]; }; + rbsurv = derive2 { name="rbsurv"; version="2.36.0"; sha256="1v4fdlfl884w74w6rlap7rqckmk1kiryp2w0zciy4ghilkgikbf5"; depends=[Biobase survival]; }; + rcellminer = derive2 { name="rcellminer"; version="2.0.0"; sha256="1y5rzv9ggfxgyy4z5hm7awd8zb8n57qr2954p2j4ikhj62b6h6z2"; depends=[Biobase fingerprint ggplot2 gplots rcdk rcellminerData shiny stringr]; }; + readat = derive2 { name="readat"; version="1.4.0"; sha256="10pib536kmkpi3ij8cccxyap7zw0q1jfd1bcv4c38vn04jm3smaa"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_sets assertive_types Biobase data_table dplyr magrittr openxlsx pathological reshape2 stringi SummarizedExperiment testthat tidyr]; }; + reb = derive2 { name="reb"; version="1.56.0"; sha256="0sh9r77r2s3fmkbkwrazl705dqwr2wh0mx34pxhjfvfic0jc1r5x"; depends=[Biobase idiogram]; }; + recount = derive2 { name="recount"; version="1.4.4"; sha256="1pm7p4qfnqajmm8ym5bq71hi8bjrm6xjax838x79b67d825nhsw9"; depends=[BiocParallel derfinder downloader GenomeInfoDb GenomicRanges GEOquery IRanges RCurl rentrez rtracklayer S4Vectors SummarizedExperiment]; }; + recoup = derive2 { name="recoup"; version="1.6.0"; sha256="09i0c2wv9c6hqc4mq6kklp0maqskpfxj871j44256dxlfh81xm3b"; depends=[BiocGenerics biomaRt circlize ComplexHeatmap GenomicAlignments GenomicRanges ggplot2 plyr rtracklayer]; }; + regionReport = derive2 { name="regionReport"; version="1.12.2"; sha256="1fvkmd2yfkvkj44ldywr1z0l1cn7c64nq3920fhlarqygv92d7xx"; depends=[BiocStyle DEFormats derfinder DESeq2 GenomeInfoDb GenomicRanges knitcitations knitr knitrBootstrap RefManageR rmarkdown S4Vectors SummarizedExperiment]; }; + regioneR = derive2 { name="regioneR"; version="1.10.0"; sha256="1vprp3l929hwzmvgskbhawfgnrymwc9n2rxd16rgagnv1dxnjxfp"; depends=[BSgenome GenomeInfoDb GenomicRanges IRanges memoise rtracklayer S4Vectors]; }; + regsplice = derive2 { name="regsplice"; version="1.4.0"; sha256="0gzm6xazidlkz33ialrxh47n1glx3bkz484rf7ily965fhs0vv53"; depends=[edgeR glmnet limma pbapply S4Vectors SummarizedExperiment]; }; + restfulSE = derive2 { name="restfulSE"; version="1.0.2"; sha256="14sw5k0bhw059yn8lw6rd275j3756znp7pirdyb1srva53isgdik"; depends=[AnnotationDbi AnnotationHub bigrquery DBI DelayedArray dplyr ExperimentHub GO_db magrittr reshape2 rhdf5client S4Vectors SummarizedExperiment]; }; + rexposome = derive2 { name="rexposome"; version="1.0.0"; sha256="1lg3ms0zx60nbhb7y7bhcl49cf63g0licxjpqrmx2jg9w0ikfj5g"; depends=[Biobase circlize corrplot FactoMineR ggplot2 ggrepel glmnet gplots gridExtra gtools Hmisc imputeLCMD lme4 lsr mice pryr psygenet2r reshape2 S4Vectors scales scatterplot3d stringr]; }; + rfPred = derive2 { name="rfPred"; version="1.16.0"; sha256="1m79rykh534iss41nw62j0dyx6v0vqk543m7dlgl7zm2kpyzdpc3"; depends=[data_table GenomicRanges IRanges Rsamtools]; }; + rgsepd = derive2 { name="rgsepd"; version="1.10.0"; sha256="0r1adlc7dxwnm8h6nh4w05z3bffvr10cch7i68a7dli968yza2vj"; depends=[AnnotationDbi biomaRt DESeq2 GO_db goseq gplots hash org_Hs_eg_db SummarizedExperiment]; }; + rhdf5 = derive2 { name="rhdf5"; version="2.22.0"; sha256="145858qg1xan6imxcbprzq3yn3mdf532aahdr6cibvdjg47hs4c1"; depends=[zlibbioc]; }; + rhdf5client = derive2 { name="rhdf5client"; version="1.0.6"; sha256="1h2dvz4rx11gsxj2fy61jwbkxgdx1jq0xahxyq7mclkbc4p8v4xy"; depends=[httr rjson S4Vectors]; }; + riboSeqR = derive2 { name="riboSeqR"; version="1.12.0"; sha256="0fg2zn5az1djdjnsrli26rl53ljrrjzmspx02dmgwf1a7nm7qmfz"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools seqLogo]; }; + rnaSeqMap = derive2 { name="rnaSeqMap"; version="2.36.0"; sha256="0y0mxzs24jz9nxcvjxymj0zxjfn1rlx3d8dzvdmfn98lbgyzm4dv"; depends=[Biobase DBI DESeq edgeR GenomicAlignments GenomicRanges IRanges Rsamtools]; }; + rnaseqcomp = derive2 { name="rnaseqcomp"; version="1.8.0"; sha256="050dc6asknh8snk6xkvpp5ivyikalslsawadh11lnw5wb4fixmhm"; depends=[RColorBrewer]; }; + roar = derive2 { name="roar"; version="1.14.0"; sha256="1q0a9l3wrlpr0s9gy93zm6lpxp6b18kg8bm2hn0759b73qpqw2bf"; depends=[BiocGenerics GenomeInfoDb GenomicAlignments GenomicRanges IRanges rtracklayer S4Vectors SummarizedExperiment]; }; + rols = derive2 { name="rols"; version="2.6.1"; sha256="0xcsfgnsykdx4iiixsx7iafnzspirpkvx4bj5swfkmay6gfif27w"; depends=[Biobase BiocGenerics httr jsonlite progress]; }; + ropls = derive2 { name="ropls"; version="1.10.0"; sha256="05fr2s8ciqn20scr6b9i4bnss7ah2svyfg6jcs605w8vc1i90bmw"; depends=[Biobase]; }; + rpx = derive2 { name="rpx"; version="1.14.0"; sha256="004kq35qzk7a16vwiqxxc42k3djvwnay70hl65913z09cv8k48mk"; depends=[RCurl xml2]; }; + rqt = derive2 { name="rqt"; version="1.4.0"; sha256="1i563yifxib3lib3x734nvkx7r1nnkp2x9hh7yrkrbwr6pp5hv39"; depends=[car CompQuadForm glmnet Matrix metap pls ropls RUnit SummarizedExperiment]; }; + rqubic = derive2 { name="rqubic"; version="1.24.0"; sha256="1568ipcnbgby4vwv0w8ak267dhg2ad5axxgir09xwxqdp3vm7cxm"; depends=[biclust Biobase BiocGenerics]; }; + rsbml = derive2 { name="rsbml"; version="2.36.0"; sha256="10bbvjv1ihps5r1rx4hrfmdssgvak1dy15098jk61rqdl50xrf8i"; depends=[BiocGenerics graph]; }; + rtracklayer = derive2 { name="rtracklayer"; version="1.38.3"; sha256="1khzfczm35k5lq9h0jlqrq01192spzjyh8s6is89spj006flwn4k"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicRanges IRanges RCurl Rsamtools S4Vectors XML XVector zlibbioc]; }; + runibic = derive2 { name="runibic"; version="1.0.2"; sha256="1nccwf551jpskh4adg3swfcdg2qwvq17cjigjq0aqp8ymcqani8v"; depends=[biclust Rcpp SummarizedExperiment testthat]; }; + sRAP = derive2 { name="sRAP"; version="1.18.0"; sha256="0yh1a2nlr1cy82vsp8kqghzgy84mwig1cpdys68bapj3cdzv9g5s"; depends=[gplots pls qvalue ROCR WriteXLS]; }; + sSeq = derive2 { name="sSeq"; version="1.16.0"; sha256="08japi9dybqzvhcjj6yvchy94lbv62wbcd7kz3ilcygs6ykawqlh"; depends=[caTools RColorBrewer]; }; + safe = derive2 { name="safe"; version="3.18.0"; sha256="0wpbmisvgkz1axx930nh5dx4dmhgmz2z5g17k1ifyvigpap75hh2"; depends=[AnnotationDbi Biobase SparseM]; }; + sagenhaft = derive2 { name="sagenhaft"; version="1.48.0"; sha256="0g3jd86gv8zkdjqjd617b9chrl6gmbilhzsa7afkxzbqvr7k3h4y"; depends=[SparseM]; }; + samExploreR = derive2 { name="samExploreR"; version="1.2.0"; sha256="0hbdcybv99h1wfpnlwinkwnbiizprl0zvdrnqbw9z049mvw6dls4"; depends=[edgeR ggplot2 RNAseqData_HNRNPC_bam_chr14 Rsubread]; }; + sampleClassifier = derive2 { name="sampleClassifier"; version="1.3.1"; sha256="06l1clgs3xkv86pm7k4an5nbsiwykmclshcqdyyz820hjil4jzys"; depends=[annotate e1071 ggplot2 MGFM MGFR]; }; + sangerseqR = derive2 { name="sangerseqR"; version="1.14.0"; sha256="162rmbri3il6xf4ifl46q7yryp3fhcxy5vyg3s7rnhk2c7scm2ss"; depends=[Biostrings shiny]; }; + sapFinder = derive2 { name="sapFinder"; version="1.16.0"; sha256="1xwm6ljpsfq2ps0568lk7ybab2x1zhijwgn6c1qvrwp674y3h51q"; depends=[pheatmap Rcpp rTANDEM]; }; + savR = derive2 { name="savR"; version="1.16.0"; sha256="1z50z5lf6x58phcsbrmy2pwz9zgm89yb0lpr9v4i5rd46bfi22ib"; depends=[ggplot2 gridExtra reshape2 scales XML]; }; + scDD = derive2 { name="scDD"; version="1.2.0"; sha256="04d4h29kv8k3i92jpbckcakky6f7ww4mjgv9f3ha702c8vphp5c1"; depends=[arm BiocParallel EBSeq fields ggplot2 mclust outliers S4Vectors scran SingleCellExperiment SummarizedExperiment]; }; + scPipe = derive2 { name="scPipe"; version="1.0.6"; sha256="16day8ga9qp9y4aff2z6j1y9lclpzzl7nqw1h3pawfpy465kwif8"; depends=[BiocGenerics biomaRt GGally ggplot2 MASS mclust Rcpp reshape Rhtslib robustbase S4Vectors scales SingleCellExperiment SummarizedExperiment zlibbioc]; }; + scater = derive2 { name="scater"; version="1.6.3"; sha256="0q3s96gf8saa1dq2fvmpl0jyj7bx3wrdfck3hanb8pxkcir2p7dn"; depends=[beachmat Biobase BiocGenerics biomaRt data_table dplyr edgeR ggbeeswarm ggplot2 limma Matrix matrixStats plyr Rcpp reshape2 rhdf5 Rhdf5lib rjson S4Vectors shiny shinydashboard SingleCellExperiment SummarizedExperiment tximport viridis]; }; + scde = derive2 { name="scde"; version="2.6.0"; sha256="0cxaail8sa0bn56gp88x64p0k022hixh44s32i37al4wd70nlv12"; depends=[BiocParallel Cairo edgeR extRemes flexmix MASS mgcv nnet pcaMethods quantreg RColorBrewer Rcpp RcppArmadillo rjson RMTstat Rook]; }; + scfind = derive2 { name="scfind"; version="1.0.0"; sha256="1rm2sgdv3z2lxrlws227z6q8h4ydpbvnd37l7f8pask1nc6zbky3"; depends=[bit dplyr hash Rcpp reshape2 SingleCellExperiment SummarizedExperiment]; }; + scmap = derive2 { name="scmap"; version="1.1.5"; sha256="0jqgk9sjb5bp5gbzq14vsif5gd5ry4213glvnpmhgqm23hmwbfhi"; depends=[Biobase BiocGenerics dplyr e1071 ggplot2 googleVis matrixStats proxy randomForest Rcpp RcppArmadillo reshape2 S4Vectors SingleCellExperiment SummarizedExperiment]; }; + scone = derive2 { name="scone"; version="1.2.0"; sha256="1xq48d3z78p54iclb1ii074i7f88qfzh5djfiyrwf3k6gsapadfi"; depends=[aroma_light BiocParallel boot class cluster compositions diptest edgeR fpc gplots hexbin limma matrixStats mixtools rARPACK RColorBrewer rhdf5 RUVSeq SummarizedExperiment]; }; + scoreInvHap = derive2 { name="scoreInvHap"; version="1.0.0"; sha256="04q2rs1gw7v97lwcialyswqzl0kd5c5298v60cm6wha25i6lwgbs"; depends=[BiocParallel Biostrings GenomicRanges snpStats SummarizedExperiment VariantAnnotation]; }; + scran = derive2 { name="scran"; version="1.6.7"; sha256="0zfm5i8xrnzb3894xygqd6zkbwaa2x3z74wbxw39fcjhyhxv2hmb"; depends=[beachmat BiocGenerics BiocParallel DT dynamicTreeCut edgeR FNN ggplot2 igraph limma Matrix Rcpp Rhdf5lib S4Vectors scater shiny SingleCellExperiment statmod SummarizedExperiment viridis zoo]; }; + scsR = derive2 { name="scsR"; version="1.14.0"; sha256="05xqrv1babqvlvr4m5k0r7yy4fbr0y46f3i4v4zcjilda1qf54pb"; depends=[BiocGenerics Biostrings ggplot2 hash IRanges plyr RColorBrewer sqldf STRINGdb]; }; + segmentSeq = derive2 { name="segmentSeq"; version="2.12.0"; sha256="0jqdddzrxahf6i7cmaay5v9ig9969avhv8ddh72v6ndfphlkfb64"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors ShortRead]; }; + semisup = derive2 { name="semisup"; version="1.2.0"; sha256="14q2p38a8r4ry8swwi88k96rchmcnplknq1a62lvm98k09k1887r"; depends=[SummarizedExperiment VGAM]; }; + seq2pathway = derive2 { name="seq2pathway"; version="1.10.0"; sha256="0wz9x4kv2zw21sppkmfp9qmclwffm5yhzx580yd3iggi1calq8bg"; depends=[biomaRt GenomicRanges GSA nnet seq2pathway_data WGCNA]; }; + seqCAT = derive2 { name="seqCAT"; version="1.0.0"; sha256="00m0w0l14y8k1viqv60n8p384lv80vnny3x9f5rmi1bba02kxkw7"; depends=[dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges lazyeval S4Vectors scales SummarizedExperiment tidyr VariantAnnotation]; }; + seqCNA = derive2 { name="seqCNA"; version="1.24.0"; sha256="1qq217mrxi0ygafyy4fvbjxhwabvific2bj0iq7871dx4dq3mcf9"; depends=[adehabitatLT doSNOW GLAD seqCNA_annot]; }; + seqLogo = derive2 { name="seqLogo"; version="1.44.0"; sha256="1ql4q4vx0j61a893dqc3c8zxmgs8sqhy3j1qhyfdvbd01vw9w1kq"; depends=[]; }; + seqPattern = derive2 { name="seqPattern"; version="1.10.0"; sha256="1kcm5w83q7w0v0vs7nyp4gq5z86c6n6pqy9zmyyhxcrns7f597pm"; depends=[Biostrings GenomicRanges IRanges KernSmooth plotrix]; }; + seqTools = derive2 { name="seqTools"; version="1.12.0"; sha256="1m69xbd9p3mzwn9wgn30b6995lydn973dfz9l65c0f5qr59ww5ns"; depends=[zlibbioc]; }; + seqbias = derive2 { name="seqbias"; version="1.26.0"; sha256="1i1zqslv0qws12x45c37h7fkgpz5wv3v87h72n4pw8gh80bgcafl"; depends=[Biostrings GenomicRanges Rsamtools zlibbioc]; }; + seqcombo = derive2 { name="seqcombo"; version="1.0.0"; sha256="0bkap2c1061yg2ws2m1fafxi37pqzkg9mzim5sqiq8sgcfmk6na6"; depends=[Biostrings cowplot dplyr ggplot2 igraph magrittr rvcheck]; }; + seqplots = derive2 { name="seqplots"; version="1.16.0"; sha256="1plwmdq2hjcqs94l7s03h9amcxdimwdrmi11z03xn10dfn1xig70"; depends=[Biostrings BSgenome class DBI digest DT fields GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges jsonlite kohonen plotrix RColorBrewer reshape2 Rsamtools RSQLite rtracklayer S4Vectors shiny]; }; + sevenbridges = derive2 { name="sevenbridges"; version="1.8.0"; sha256="1jlw69yxh697q3bwd54mvzfiqskg469jyyh97sqnlizjmm5hiw11"; depends=[curl docopt dplyr httr jsonlite liftr miniUI objectProperties rstudioapi S4Vectors shiny stringr uuid yaml]; }; + shinyMethyl = derive2 { name="shinyMethyl"; version="1.14.0"; sha256="17w7shgr4s5w3y1ik8zgr9brv7q87dx9l6dfqywsyvfmmkddimwa"; depends=[BiocGenerics IlluminaHumanMethylation450kmanifest matrixStats minfi RColorBrewer shiny]; }; + shinyTANDEM = derive2 { name="shinyTANDEM"; version="1.16.0"; sha256="17x0bq1kzvmqqf30y0dmmp9777i62525mp4ysyv2m6vb9bgrbc4y"; depends=[mixtools rTANDEM shiny xtable]; }; + sigPathway = derive2 { name="sigPathway"; version="1.46.0"; sha256="18nn7rpg67dz30v1drm0lnsb1wnww7maxdg4gk960wayasp8hk2z"; depends=[]; }; + sigaR = derive2 { name="sigaR"; version="1.26.0"; sha256="196jj39frqi9vmdl592ihkji4vxfimv6xr9cbmlgnnpjpd68b05k"; depends=[Biobase CGHbase corpcor igraph limma marray MASS mvtnorm penalized quadprog snowfall]; }; + siggenes = derive2 { name="siggenes"; version="1.52.0"; sha256="1g88rga3pksmydkqd117wsqj1i5hfzi3rkadac51n8bk0sx6rfmw"; depends=[Biobase multtest]; }; + sights = derive2 { name="sights"; version="1.4.0"; sha256="1hnzvx9avgvv4jgsgilbdyri9qqbf4sbcpyy47j31sg70ilzydxs"; depends=[ggplot2 lattice MASS qvalue reshape2]; }; + signeR = derive2 { name="signeR"; version="1.4.0"; sha256="0rmdwjhp6ps9bvmhk1znarzg1kk319sb2rvxr51qwwka7idxfa0n"; depends=[BiocGenerics Biostrings BSgenome class GenomicRanges nloptr NMF PMCMR Rcpp RcppArmadillo VariantAnnotation]; }; + sigsquared = derive2 { name="sigsquared"; version="1.10.0"; sha256="0v68p83k43xx7yvxzknxzwqyvvccffi557dlz25wh8v8s3wkyk2c"; depends=[Biobase survival]; }; + similaRpeak = derive2 { name="similaRpeak"; version="1.10.0"; sha256="144mc40q2jgswk2w1ri5bh0cs8lgs0b6s1jwljrilfpvjww0r36f"; depends=[R6]; }; + simpleaffy = derive2 { name="simpleaffy"; version="2.54.0"; sha256="0b91hlsgq61rbwv08w2951dric7chvq1mfsp9716qvw7l8jqngng"; depends=[affy Biobase BiocGenerics gcrma genefilter]; }; + simulatorZ = derive2 { name="simulatorZ"; version="1.12.0"; sha256="1nzkaa6x0my1pk4h8naznckmzdd72wwdfxk6ivczbpnzxhnpz8nd"; depends=[Biobase BiocGenerics CoxBoost gbm GenomicRanges Hmisc IRanges S4Vectors SummarizedExperiment survival]; }; + sincell = derive2 { name="sincell"; version="1.10.0"; sha256="07p2ck9wzxw4kz9bzxq8kggmmy2yvbz939mcn43giag1chx2ndax"; depends=[cluster entropy fastICA fields ggplot2 igraph MASS proxy Rcpp reshape2 Rtsne scatterplot3d statmod TSP]; }; + sizepower = derive2 { name="sizepower"; version="1.48.0"; sha256="199rqpbjp4l5faw6z9srfg7vs7kmdbzh12vm52s02v8mayb46mbp"; depends=[]; }; + skewr = derive2 { name="skewr"; version="1.10.0"; sha256="0s78dp3lg27x4qrs9q9nvi69vfrphncf5ivm15rf9k49smhr3bh3"; depends=[IlluminaHumanMethylation450kmanifest IRanges methylumi minfi mixsmsn RColorBrewer wateRmelon]; }; + slalom = derive2 { name="slalom"; version="1.0.0"; sha256="0jjr9k7fdvi4sg1ivnb65migcmyz3rg3fwm9gd50q6w80bs64g89"; depends=[BH ggplot2 GSEABase Rcpp RcppArmadillo rsvd SingleCellExperiment SummarizedExperiment]; }; + snapCGH = derive2 { name="snapCGH"; version="1.48.0"; sha256="12pdmmywr9lf44kna3wr59h1zyjck3734qw11ahhah40j5k247xd"; depends=[aCGH cluster DNAcopy GLAD limma tilingArray]; }; + snm = derive2 { name="snm"; version="1.26.0"; sha256="14fpxl3h7673qffavknavjnlwcqk22qx3qh7i1p2i35gg3qw5rs0"; depends=[corpcor lme4]; }; + snpStats = derive2 { name="snpStats"; version="1.28.0"; sha256="1x9qwynh2hwl24vq02naf4mchpch7xi2pkdrlgw896k28kx0lvir"; depends=[BiocGenerics Matrix survival zlibbioc]; }; + soGGi = derive2 { name="soGGi"; version="1.10.0"; sha256="0jlpyq55byaqlnmn9n2k5scmm4iv7gzyl0ll7fn6ddhi3vxw4jxi"; depends=[BiocGenerics BiocParallel Biostrings chipseq GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges preprocessCore reshape2 Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; + sparseDOSSA = derive2 { name="sparseDOSSA"; version="1.2.0"; sha256="0pbj09424a8f0xsr446bcxqgmha2zzmfvrcszknli1ai7isp23sq"; depends=[MASS MCMCpack optparse tmvtnorm]; }; + specL = derive2 { name="specL"; version="1.12.0"; sha256="03bkh0z3pd6jl47wq2h6zd73fvaggwnaj2b4ibijwkg1643mfiip"; depends=[DBI protViz Rcpp RSQLite seqinr]; }; + spikeLI = derive2 { name="spikeLI"; version="2.38.0"; sha256="00fixl9jpjfm0qgsg1lwi0315sa53j1j9fbrl69j8y2gbr8kgg28"; depends=[]; }; + spkTools = derive2 { name="spkTools"; version="1.34.0"; sha256="0vpyv78c6c58qrcz91mir7jh9gx2j2l48bclabvgi0k2156wpwn7"; depends=[Biobase gtools RColorBrewer]; }; + splatter = derive2 { name="splatter"; version="1.2.1"; sha256="0iap91mmfan5p8wcpkxmqrrlk4zhgcigl08js5k1kcizmqkiar5g"; depends=[akima BiocGenerics BiocParallel checkmate edgeR fitdistrplus ggplot2 locfit matrixStats scales scater SingleCellExperiment SummarizedExperiment]; }; + spliceR = derive2 { name="spliceR"; version="1.20.0"; sha256="1skwj4cqf4s14df42jgy5b9fxrb5c5np9khc0wkg732qddbdlagd"; depends=[cummeRbund GenomicRanges IRanges plyr RColorBrewer rtracklayer VennDiagram]; }; + spliceSites = derive2 { name="spliceSites"; version="1.26.0"; sha256="19av0wkdvy4x4p0nkhy9ca450d6j0s68m2lp26116ydh4lzv4p8x"; depends=[Biobase BiocGenerics Biostrings doBy IRanges rbamtools refGenome seqLogo]; }; + splicegear = derive2 { name="splicegear"; version="1.50.0"; sha256="0i47l91p77s4acgrx9c8ll2va7amysw1g2acs36mn99hpz86v4m4"; depends=[annotate Biobase XML]; }; + splineTimeR = derive2 { name="splineTimeR"; version="1.6.0"; sha256="12x1lzcz8xih462nbzihdn9npypzr9clwy36vvwrfwh2plcq7314"; depends=[Biobase FIs GeneNet GSEABase gtools igraph limma longitudinal]; }; + splots = derive2 { name="splots"; version="1.44.0"; sha256="09zcf9l3mr3y650di1v5h47fp020n0cf5hp9ccjwf1480wwl7rpn"; depends=[RColorBrewer]; }; + spotSegmentation = derive2 { name="spotSegmentation"; version="1.52.0"; sha256="0jmhgk37na16fhlfqx3a6fhm7syyh25qh4nrwgc4f94d13hs70mp"; depends=[mclust]; }; + sscore = derive2 { name="sscore"; version="1.50.0"; sha256="0ivs9fb6ps0hv1ywja95x9xbsmljcv6zjkpvyb25a6l06vyjdh08"; depends=[affy affyio]; }; + sscu = derive2 { name="sscu"; version="2.8.0"; sha256="1aa48cr8xxin9vzv280k7m4z6qy59gzclhdnj9gpxrh90kghv5vs"; depends=[BiocGenerics Biostrings seqinr]; }; + ssize = derive2 { name="ssize"; version="1.52.0"; sha256="02c1gwl4c6sf95k0rgahb2vbgwi53vlfz6nydg7zmqa3hvf16mr3"; depends=[gdata xtable]; }; + ssviz = derive2 { name="ssviz"; version="1.12.0"; sha256="1q8hvqpqniyfma8k2j0xpb8jnc05xdazh74kk3b0fkriqz11n8xw"; depends=[Biostrings ggplot2 RColorBrewer reshape Rsamtools]; }; + staRank = derive2 { name="staRank"; version="1.20.0"; sha256="0f7ql6sc5dxk86ca4qmlgsbvzvw1h97y6jmzbrcvn24n9c3hkrgy"; depends=[cellHTS2]; }; + stageR = derive2 { name="stageR"; version="1.0.0"; sha256="0553av4ys27ag7v77mfb7wxw7d09g1f0vf4615jcjir9mvc6y3qj"; depends=[SummarizedExperiment]; }; + statTarget = derive2 { name="statTarget"; version="1.8.0"; sha256="0z6niv4i50f8b7g78c7rcdrniblvv5sq2phb7vd2glnh038r1rl0"; depends=[gWidgets2 gWidgets2RGtk2 impute pdist pls plyr randomForest ROC rrcov]; }; + stepNorm = derive2 { name="stepNorm"; version="1.50.0"; sha256="10fd623pqy944q9l913bv1a3dh7wk4i0r211hvvzdr39kfhjl6mf"; depends=[marray MASS]; }; + subSeq = derive2 { name="subSeq"; version="1.8.0"; sha256="1z9qwfclhnnvcp4r4zfi201rmgd0hj47rd77x958m1d6d3z65m34"; depends=[Biobase data_table digest dplyr ggplot2 magrittr qvalue tidyr]; }; + supraHex = derive2 { name="supraHex"; version="1.16.0"; sha256="10lhdhlb33p91np6ldmxc8yqgxwly7p37nlacm77q35dp05a453n"; depends=[ape hexbin MASS]; }; + survcomp = derive2 { name="survcomp"; version="1.28.4"; sha256="185k9srpfzvr51xfbgq1xy39x40cxgcvvq772y9gdk1702fxvyw0"; depends=[bootstrap ipred KernSmooth prodlim rmeta SuppDists survival survivalROC]; }; + sva = derive2 { name="sva"; version="3.26.0"; sha256="0q5xb68wfcnchy8rkv5ma67pmz1i91lsnvmwmj8f1c3w4xan3pgw"; depends=[BiocParallel genefilter limma matrixStats mgcv]; }; + swfdr = derive2 { name="swfdr"; version="1.4.0"; sha256="0ls0w09bkxxqv1y50d5c1s0qpxb1xdyall8ypvky8awi7v6jlrcg"; depends=[dplyr ggplot2 reshape2]; }; + switchBox = derive2 { name="switchBox"; version="1.14.0"; sha256="0mhkf4wwd3v3s1148nafbd6x6ys8j933glh4gp3wj24ddmmpxvb2"; depends=[gplots pROC]; }; + switchde = derive2 { name="switchde"; version="1.4.0"; sha256="0fxdg1d0jgqqas5cwmpcm96qfja0xw62x1421ahxfsrh1q6hqay6"; depends=[dplyr ggplot2 SingleCellExperiment SummarizedExperiment]; }; + synapter = derive2 { name="synapter"; version="2.2.0"; sha256="1m9s2pdm38wb5riyy0wf8g4a2ilrrkznsy9virdiqqm5kqzpkzic"; depends=[Biobase Biostrings cleaver knitr lattice MSnbase multtest qvalue RColorBrewer readr rmarkdown]; }; + synergyfinder = derive2 { name="synergyfinder"; version="1.4.2"; sha256="11zpza9ghd1dckb604c5v3rxpgf6v29qm9yp1vpdnm04gfj2q6iy"; depends=[drc ggplot2 gplots gridBase lattice nleqslv reshape2 SpatialExtremes]; }; + synlet = derive2 { name="synlet"; version="1.8.0"; sha256="1pchh66wg3cvx1kq1l521lg7w0qpnw5azig339pnpwwymh9fpa5j"; depends=[doBy dplyr ggplot2 magrittr RankProd RColorBrewer reshape2]; }; + systemPipeR = derive2 { name="systemPipeR"; version="1.12.0"; sha256="11mj8pjq5vj25768vmagpzv74fvi3p3kdk5zdlznqyiaggri04cv"; depends=[annotate BatchJobs BiocGenerics Biostrings DESeq2 edgeR GenomicFeatures GenomicRanges ggplot2 GO_db GOstats limma pheatmap rjson Rsamtools ShortRead SummarizedExperiment VariantAnnotation]; }; + tRanslatome = derive2 { name="tRanslatome"; version="1.16.0"; sha256="1whnx5ka8jhqsis68drs7ah3dg5lj6vfw3a42l7s8mp94n0qdixj"; depends=[anota Biobase DESeq edgeR GOSemSim gplots Heatplus limma org_Hs_eg_db plotrix RankProd samr sigPathway topGO]; }; + tenXplore = derive2 { name="tenXplore"; version="1.0.0"; sha256="0f57ak81vndff6xij2hn28xnrly1088sw7bc1jgfgzldy94mxn1m"; depends=[AnnotationDbi matrixStats ontoProc org_Mm_eg_db restfulSE shiny SummarizedExperiment]; }; + ternarynet = derive2 { name="ternarynet"; version="1.22.0"; sha256="1k8s31zjyrid1wkhg5ighphi8nr8i5nbcd0sjqpjzv1zhi35hdaa"; depends=[igraph]; }; + tigre = derive2 { name="tigre"; version="1.32.0"; sha256="007lnj4hcq8sls8vdr59h7hjjsdjwk3i6snx97i8ply683ndc3ph"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI gplots RSQLite]; }; + tilingArray = derive2 { name="tilingArray"; version="1.56.0"; sha256="0ahw51r1zsb47r2q90670ngakb34y49d3njwlchyk2r6vz3kzqkb"; depends=[affy Biobase genefilter pixmap RColorBrewer strucchange vsn]; }; + timecourse = derive2 { name="timecourse"; version="1.50.0"; sha256="0lr4znyi82mqjm02wwr7zq6l2cfbq2gliynxim45xhahqp43cbpr"; depends=[Biobase limma marray MASS]; }; + timescape = derive2 { name="timescape"; version="1.2.0"; sha256="0v3a7gn2d852h8m0053a57w153z4nlmp5mb5g96kjw06vvwr71jd"; depends=[dplyr gtools htmlwidgets jsonlite stringr]; }; + tkWidgets = derive2 { name="tkWidgets"; version="1.56.0"; sha256="0z1vd0nymyvvrn5jc97q33y9xl6w8pd4wzb6yyfjg8jy85kswfgf"; depends=[DynDoc widgetTools]; }; + tofsims = derive2 { name="tofsims"; version="1.6.0"; sha256="1zpq0c01fqm3yl2mkvx1yl2ajj2a933wa6h7hinrh3mdyix8pzrn"; depends=[ALS ChemometricsWithR KernSmooth ProtGenerics Rcpp RcppArmadillo signal]; }; + topGO = derive2 { name="topGO"; version="2.30.0"; sha256="1hqffz5qp7glxdvjp37005g8qk5nam3f9wpf6d1wjnzpar04f3dz"; depends=[AnnotationDbi Biobase BiocGenerics DBI GO_db graph lattice matrixStats SparseM]; }; + topdownr = derive2 { name="topdownr"; version="1.0.0"; sha256="1yshm8a6dirnmda5ydx1ksndbbcrqlp25lrj1rqxnaclqb9xn0g2"; depends=[Biobase BiocGenerics Biostrings ggplot2 Matrix MSnbase mzR S4Vectors]; }; + trackViewer = derive2 { name="trackViewer"; version="1.14.1"; sha256="029yff299x23imqyk62cmxcsvdx34a6b4l9zp4p46iq3jb841h66"; depends=[AnnotationDbi GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges grImport Gviz htmlwidgets IRanges pbapply Rsamtools rtracklayer S4Vectors scales]; }; + tracktables = derive2 { name="tracktables"; version="1.12.0"; sha256="02l5n4sbwzig5kdnjyhhqpiwskaf8f4pqkra3m511vrqfpmd39f3"; depends=[GenomicRanges IRanges RColorBrewer Rsamtools stringr tractor_base XML XVector]; }; + transcriptR = derive2 { name="transcriptR"; version="1.6.0"; sha256="0malha3w4vm21bmqdvn8y9q37m0ilghbyzmwgayvx9lvy3mfnk2s"; depends=[BiocGenerics caret chipseq e1071 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges pROC reshape2 Rsamtools rtracklayer S4Vectors]; }; + transcriptogramer = derive2 { name="transcriptogramer"; version="1.0.0"; sha256="08yab83dkwjwbbgf05k05c32yn74ls8xy7lm3yr39sb3nfqmra9n"; depends=[biomaRt data_table doSNOW foreach igraph limma progress RedeR snow topGO]; }; + traseR = derive2 { name="traseR"; version="1.8.0"; sha256="1zqcz7w8pwc2vzjr137iv1bpfddh17kvmqaz7hgs9z1962704l0y"; depends=[BSgenome_Hsapiens_UCSC_hg19 GenomicRanges IRanges]; }; + treeio = derive2 { name="treeio"; version="1.2.1"; sha256="1m36jqdn9png95zy0n19x4p6ggc8f9sz9708l1kf8as8bhan9rlx"; depends=[ape ggplot2 jsonlite magrittr rvcheck]; }; + trena = derive2 { name="trena"; version="1.0.0"; sha256="0b7bwm5xfav3m0gnz4mnc6959ha0larqpzlny3r8kxj4gx6cql4j"; depends=[AnnotationDbi BiocParallel biomaRt Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 BSgenome_Hsapiens_UCSC_hg38 BSgenome_Mmusculus_UCSC_mm10 DBI flare GenomicRanges glmnet lassopv MotifDb org_Hs_eg_db randomForest RMySQL RPostgreSQL RSQLite SNPlocs_Hsapiens_dbSNP150_GRCh38 stringr vbsr]; }; + triform = derive2 { name="triform"; version="1.20.0"; sha256="09hlnkrbzgk0vn1jcbja2i0hv54pfr2nzf33ik0rabrvv75zhb46"; depends=[BiocGenerics IRanges yaml]; }; + trigger = derive2 { name="trigger"; version="1.24.0"; sha256="16r7b0wy37pbylz9ch6516nygpxrb31qm42i8amh04jy60zw64rw"; depends=[corpcor qtl qvalue sva]; }; + trio = derive2 { name="trio"; version="3.16.0"; sha256="1bw0cy95qrzmg6qiy9j8n4ydi734z3q78l1pnaxagdk1ji5ab577"; depends=[]; }; + triplex = derive2 { name="triplex"; version="1.18.0"; sha256="0x74ykqkjhbbarzgkdba090lw61n3wzpy4izsnnbawix96wqy6dx"; depends=[Biostrings GenomicRanges IRanges S4Vectors XVector]; }; + tspair = derive2 { name="tspair"; version="1.36.0"; sha256="079wj12v6x5df2cvmhwg241042h6lgbky4hpa36b3pd7z6pjsq6w"; depends=[Biobase]; }; + tweeDEseq = derive2 { name="tweeDEseq"; version="1.24.0"; sha256="1ms9psb5xagkxam117iksb1fj815jdlymddhlf3kv6hgyj4bx793"; depends=[cqn edgeR limma MASS]; }; + twilight = derive2 { name="twilight"; version="1.54.0"; sha256="0b7k6dw23814qgzwqxrvpaj3f22fmkivd32scspf4i2rzm33dh53"; depends=[Biobase]; }; + twoddpcr = derive2 { name="twoddpcr"; version="1.2.1"; sha256="0d8i2vr3db16nndgw4sy0kmkx7517pykvp48jsrw26n38gbbmvx0"; depends=[class ggplot2 hexbin RColorBrewer S4Vectors scales shiny]; }; + tximport = derive2 { name="tximport"; version="1.6.0"; sha256="1gyqcm91hxg1kgjqcz2qw1n56yp9pymjzs50rwcpb2893dr8sp2h"; depends=[]; }; + uSORT = derive2 { name="uSORT"; version="1.4.0"; sha256="0zr6x9na95n055jk5csipvvd8dsf9pzqh7y4z4fhzfgj8bb2rwbv"; depends=[Biobase BiocGenerics cluster fpc gplots igraph Matrix monocle plyr RANN RSpectra VGAM]; }; + unifiedWMWqPCR = derive2 { name="unifiedWMWqPCR"; version="1.14.0"; sha256="1d6khk7d6crrlhp3plwfi0d7nxvdk02ggnm4s5s6c5s3jpk64jra"; depends=[BiocGenerics HTqPCR]; }; + variancePartition = derive2 { name="variancePartition"; version="1.8.1"; sha256="08isp7j3dd9qii7ly8sf2glpc7x9r6dpc0ci4ix3l5diw2lq30xx"; depends=[Biobase colorRamps doParallel foreach ggplot2 gplots iterators limma lme4 MASS pbkrtest reshape2]; }; + vbmp = derive2 { name="vbmp"; version="1.46.0"; sha256="01bzkdjpb5hv9h2pf4p4h2w19771wc5p6hvij7ywygdx560hb93p"; depends=[]; }; + viper = derive2 { name="viper"; version="1.12.0"; sha256="1k9yfz010v1g5ap900m1skaxc7ygy20y4xdc8a2c0dgfkclnw59m"; depends=[Biobase e1071 KernSmooth mixtools]; }; + vsn = derive2 { name="vsn"; version="3.46.0"; sha256="18y62phzirj75gg6v5l41jwybmk23ia6w7qhch0kxc4bl2rysw6j"; depends=[affy Biobase ggplot2 lattice limma]; }; + vtpnet = derive2 { name="vtpnet"; version="0.18.0"; sha256="02nws97nmlrpzwb5jqm3fmg38mp1qdf41hzwmmprhfhsymnmc4ch"; depends=[doParallel foreach GenomicRanges graph gwascat]; }; + vulcan = derive2 { name="vulcan"; version="1.0.0"; sha256="1yxm6yg7d65wh9rl6k5b6831y4hr5l9nnmfi0azxz1h4x1ghqbdj"; depends=[Biobase caTools ChIPpeakAnno csaw DESeq DiffBind GenomicRanges gplots locfit S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene viper wordcloud zoo]; }; + wateRmelon = derive2 { name="wateRmelon"; version="1.22.0"; sha256="1043wwkavdkdwlps5hcqn6hi2jk8w1m1lfb8fp6i4yp82r82zn5h"; depends=[Biobase IlluminaHumanMethylation450kanno_ilmn12_hg19 illuminaio limma lumi matrixStats methylumi ROC]; }; + wavClusteR = derive2 { name="wavClusteR"; version="2.11.0"; sha256="0f1lk45a9yqr0ysjq8kjpqys8qln2b8ix03nywcqnkl1lk2b5ymi"; depends=[BiocGenerics Biostrings foreach GenomicFeatures GenomicRanges ggplot2 Hmisc IRanges mclust Rsamtools rtracklayer S4Vectors seqinr stringr wmtsa]; }; + waveTiling = derive2 { name="waveTiling"; version="1.20.0"; sha256="1dlz548vjnarz15mscmj56jp2hn810w0dy7xprxx22n51h7kb7jg"; depends=[affy Biobase Biostrings GenomeGraphs GenomicRanges IRanges oligo oligoClasses preprocessCore waveslim]; }; + weaver = derive2 { name="weaver"; version="1.44.0"; sha256="06fg8z4gp2mabiy9jrfwkrrz1r4qzzgjk3lxj6d53ii2xhq95vy6"; depends=[codetools digest]; }; + webbioc = derive2 { name="webbioc"; version="1.50.0"; sha256="1kg6apnhq97ypmpx6qm2f7wip81f910mjlg9kmd9zzmhnkrhqamd"; depends=[affy annaffy Biobase BiocInstaller gcrma multtest qvalue vsn]; }; + widgetTools = derive2 { name="widgetTools"; version="1.56.0"; sha256="0xkasd8z4sy9dsb2r7k3x2vhbqh9md39bz3qqwjsz8hgl6f0ggsr"; depends=[]; }; + wiggleplotr = derive2 { name="wiggleplotr"; version="1.2.0"; sha256="1scqvmh16y6c81qlvfa8y9z47p8wl4lccq0sm5wy4jay6zch8mn2"; depends=[assertthat cowplot dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges purrr rtracklayer S4Vectors]; }; + xcms = derive2 { name="xcms"; version="3.0.0"; sha256="0yy45y7shh70ql8wrpr8bjqsx7i30hjqdgvwaxv4kypf4pxy7rx0"; depends=[Biobase BiocGenerics BiocParallel lattice MassSpecWavelet MSnbase multtest mzR plyr ProtGenerics RANN RColorBrewer S4Vectors]; }; + xmapbridge = derive2 { name="xmapbridge"; version="1.36.0"; sha256="0jv07kgjh3jkk61bw92kr3s10sai427f93r5j5hjzjhn6wzpahqy"; depends=[]; }; + xps = derive2 { name="xps"; version="1.38.0"; sha256="1xmsbjkcy04nz1npbr2bia1p4x4q6b55mmk0vqkphjl6x93dw6c8"; depends=[]; }; + yamss = derive2 { name="yamss"; version="1.4.0"; sha256="08mq0f27if86wacck1317fhm6gchxqzbj2vj9sxasr865jdzr1r9"; depends=[BiocGenerics data_table EBImage IRanges limma Matrix mzR S4Vectors SummarizedExperiment]; }; + yaqcaffy = derive2 { name="yaqcaffy"; version="1.38.0"; sha256="144kz9q7ahrvv5h6r96pva039s1ms2pz5rsqkx1hv1jjb19070lg"; depends=[simpleaffy]; }; + yarn = derive2 { name="yarn"; version="1.4.0"; sha256="1gr7nwhp8gpzv6zbwh56q37bkgq1g61i1lhqsps40izwr2ib8qiv"; depends=[Biobase biomaRt downloader edgeR gplots limma matrixStats preprocessCore quantro RColorBrewer readr]; }; + zFPKM = derive2 { name="zFPKM"; version="1.0.0"; sha256="1bj2a1m0ivnv604796d1x4cf9y2nwwbsql5k3vvv1gvjp7wlp81v"; depends=[checkmate dplyr ggplot2 SummarizedExperiment tidyr]; }; + zinbwave = derive2 { name="zinbwave"; version="1.0.0"; sha256="0r7drhs77brk0p47kvz8s0xcwpsrgmwrqzzshs84ip1sgci41iia"; depends=[BiocParallel copula edgeR genefilter glmnet SingleCellExperiment softImpute SummarizedExperiment]; }; + zlibbioc = derive2 { name="zlibbioc"; version="1.24.0"; sha256="1zr9hbh55hglfpy15cpxwmddxblhyb0an15953l3rbhmlh2vpy92"; depends=[]; }; } diff --git a/pkgs/development/r-modules/cran-packages.nix b/pkgs/development/r-modules/cran-packages.nix index eb7cd60d88b3..c91df83d229c 100644 --- a/pkgs/development/r-modules/cran-packages.nix +++ b/pkgs/development/r-modules/cran-packages.nix @@ -4,7 +4,7 @@ # Rscript generate-r-packages.R cran >new && mv new cran-packages.nix { self, derive }: -let derive2 = derive { snapshot = "2017-11-29"; }; +let derive2 = derive { snapshot = "2018-02-20"; }; in with self; { A3 = derive2 { name="A3"; version="1.0.0"; sha256="017hq9pjsv1h9i7cqk5cfx27as54shlhdsdvr6jkhb8jfkpdb6cw"; depends=[pbapply xtable]; }; ABC_RAP = derive2 { name="ABC.RAP"; version="0.9.0"; sha256="1kdspln17v0krvahcd55vib4dv5azp60b3r1zf489x10qqbp1mxk"; depends=[]; }; @@ -12,12 +12,13 @@ in with self; { ABCoptim = derive2 { name="ABCoptim"; version="0.15.0"; sha256="1ih0xk88qhsmpvnxf56041wx5sk8as2f4f2gdnpnwdym9mbr9n4b"; depends=[Rcpp]; }; ABCp2 = derive2 { name="ABCp2"; version="1.2"; sha256="1s2skkxpzss7c29i8600psgrp0hl46jcrxqrmy2b4db8hc0kcnbx"; depends=[MASS]; }; ABHgenotypeR = derive2 { name="ABHgenotypeR"; version="1.0.1"; sha256="08cpmnaaxsm5c5bjifnfxdlvg5inrf13biqpcl2yq5zpqjmiki0l"; depends=[ggplot2 reshape2]; }; + ABPS = derive2 { name="ABPS"; version="0.2"; sha256="1k3f5i34f4w2khkszb4qhwwcpiy7gsfh82vjr6rypwg6rx5rjclq"; depends=[kernlab]; }; ACA = derive2 { name="ACA"; version="1.0"; sha256="0z4wz85iv5k5vw29m6xfh2v96shv314nbxkv3v3yhl77br4bmj4q"; depends=[]; }; ACCLMA = derive2 { name="ACCLMA"; version="1.0"; sha256="1na27sp18fq12gp6vxgqw1ffsz2yi1d8xvrxbrzx5g1kqxrayy0v"; depends=[]; }; ACD = derive2 { name="ACD"; version="1.5.3"; sha256="1a67bi3hklq8nlc50r0qnyr4k7m9kpvijy8sqqpm54by5hsysfd6"; depends=[]; }; ACDm = derive2 { name="ACDm"; version="1.0.4"; sha256="0b4f02ga5ra66mbrm79g0bnlzmii82rks9kmxixxqgf18yhlyjil"; depends=[dplyr ggplot2 plyr Rsolnp zoo]; }; ACEt = derive2 { name="ACEt"; version="1.8.0"; sha256="0626d6kg485xjya164wagrr5z223jvi93ywbwpdns7fkm03c0dlq"; depends=[BH MASS Rcpp RcppArmadillo]; }; - ACMEeqtl = derive2 { name="ACMEeqtl"; version="1.4"; sha256="02hc33g35x59jn9skcspgam1qskjvwy5djrg2djl9qmwq4aj0j9k"; depends=[filematrix]; }; + ACMEeqtl = derive2 { name="ACMEeqtl"; version="1.5"; sha256="0jcwpqr6snvzi55zn24aiqzbbjqpq0h6fiw8m0d01120pna21ks3"; depends=[filematrix]; }; ACNE = derive2 { name="ACNE"; version="0.8.1"; sha256="0kzapsalzw6jsi990qicp4glijh5ddnfimsg5pidgbwxg4i05grl"; depends=[aroma_affymetrix aroma_core MASS matrixStats R_filesets R_methodsS3 R_oo R_utils]; }; ACSNMineR = derive2 { name="ACSNMineR"; version="0.16.8.25"; sha256="0gh604s8qall6zfjlwcg2ilxjvz08dplf9k5g47idhv43scm748l"; depends=[ggplot2 gridExtra scales]; }; ACSWR = derive2 { name="ACSWR"; version="1.0"; sha256="195vjrkang5cl7gwsna0aq4p0h4jym9xg9yh94bnf8vq6wf8j83n"; depends=[MASS]; }; @@ -26,7 +27,7 @@ in with self; { ADDT = derive2 { name="ADDT"; version="2.0"; sha256="044bb1jw2m8vwk5q8l7rlz4kqphjvy8i9d59rjg0k5q5l9vczfrp"; depends=[coneproj Matrix nlme]; }; ADGofTest = derive2 { name="ADGofTest"; version="0.3"; sha256="0ik817qzqp6kfbckjp1z7srlma0w6z2zcwykh0jdiv7nahwk3ncw"; depends=[]; }; ADM3 = derive2 { name="ADM3"; version="1.3"; sha256="1hg9wjdhckilqd13dr4cim4j6jsh2sdwm18i3pfmfdj8cyswm3h0"; depends=[]; }; - ADMM = derive2 { name="ADMM"; version="0.1.1"; sha256="0zdbnjqxwi78v6dn5aq0dschd1qnrxm6j49qj4k48dg4wmq9p21k"; depends=[Matrix Rcpp RcppArmadillo]; }; + ADMM = derive2 { name="ADMM"; version="0.2.1"; sha256="1km9xqglx77nizix9cik7f4y3q0nybff3r6xw9pn1k1kcmm9qjhj"; depends=[Matrix Rcpp RcppArmadillo Rdpack]; }; ADMMnet = derive2 { name="ADMMnet"; version="0.1"; sha256="15f1zhgv7xai954qz2ahj4kpxyvr2svxpmybz7j43bhjpkq72dmq"; depends=[Matrix Rcpp RcppEigen]; }; ADPF = derive2 { name="ADPF"; version="0.0.1"; sha256="1n7302xx77ngvp9i2h582i1mqslzllcdr0bn3pl2zk9jd8k97p7n"; depends=[]; }; ADPclust = derive2 { name="ADPclust"; version="0.7"; sha256="0s47cpsjykn7imsssa9w9b6g9d1sz2yah78yqzxmh0i3lqd757c1"; depends=[cluster dplyr fields knitr]; }; @@ -41,7 +42,7 @@ in with self; { AHR = derive2 { name="AHR"; version="1.4.2"; sha256="15khncbbnpbvj6rcn6rklzhv5a0mmfyjljv77bsx96zfis7mk2d7"; depends=[etm MASS Rcpp RcppArmadillo survival]; }; AICcmodavg = derive2 { name="AICcmodavg"; version="2.1-1"; sha256="0y2lgvy0a78wdx4xcq85fkhl4hyvjdljrj199mibisfgkh61amb1"; depends=[lattice MASS Matrix nlme survival unmarked VGAM xtable]; }; AID = derive2 { name="AID"; version="2.3"; sha256="0p3cjbd6kxdy5igmgzkc2bd3w0p0w1jb9jkn9n0id5lv44b5gskj"; depends=[ggplot2 MASS nortest psych tseries]; }; - AIG = derive2 { name="AIG"; version="0.1.7"; sha256="0fg2g74cg7nsgsfvglr91f0bcqnszs1c8vr1zkybq2sgy1kcpnaa"; depends=[dplyr magrittr mgcv rgl]; }; + AIG = derive2 { name="AIG"; version="0.1.8"; sha256="19vw3gycj0i41g08jaf4jh1nff7d0dpqga1hs20gs3n02cxim6mg"; depends=[dplyr magrittr mgcv rgl]; }; AIM = derive2 { name="AIM"; version="1.01"; sha256="11lkfilxk265a7jkc1wq5xlgxa56xhg302f1q9xb7gmjnzdigb21"; depends=[survival]; }; ALA4R = derive2 { name="ALA4R"; version="1.5.6"; sha256="0fj5y6z179glhc2jj3ksd5w29xmlqm71n23hp1vynrza70fz0gna"; depends=[assertthat digest httr jsonlite plyr RCurl sp stringr wellknown]; }; ALDqr = derive2 { name="ALDqr"; version="1.0"; sha256="0gk8hxh4p0fi47sf1zsvvxxbzp38vzk60wh8hmc63phnjab6qkv4"; depends=[HyperbolicDist sn]; }; @@ -62,9 +63,10 @@ in with self; { ANLP = derive2 { name="ANLP"; version="1.3"; sha256="1m1jnfaqny6qprgyk4f3naan5i5cildawv322h6mc25nypwl12m4"; depends=[dplyr qdap RWeka tm]; }; ANN2 = derive2 { name="ANN2"; version="1.5"; sha256="17b0dv1dl4kni7yvrrwk65cadk6f7qk7505r27j9v530pffyv1k3"; depends=[Rcpp RcppArmadillo robustbase]; }; ANOM = derive2 { name="ANOM"; version="0.5"; sha256="14nfy9xplbabfprwxz5fvx26nmqhp657vr6d90dc8vk8ds63ckiz"; depends=[ggplot2 MCPAN multcomp nparcomp SimComp]; }; - ANOVAreplication = derive2 { name="ANOVAreplication"; version="1.1.2"; sha256="035r0kn0jzkgzvk113m098zjmy78pddjkvn4h7lgliamrzaky1xx"; depends=[quadprog shiny]; }; + ANOVAreplication = derive2 { name="ANOVAreplication"; version="1.1.3"; sha256="1cmps21lrmk6lh6gx0q9fz2736q7cibfcisvir6hnik3ablv70bn"; depends=[quadprog shiny]; }; APCanalysis = derive2 { name="APCanalysis"; version="1.0"; sha256="11snn5i8zyjpzf58ica762fpp14v7x5h8a8iwx4s4v81pgvlx862"; depends=[]; }; - APML0 = derive2 { name="APML0"; version="0.5"; sha256="1zz47vwmijq637ah20sj61zsignqcnsisidpx41dnaa06nbkp77p"; depends=[Matrix Rcpp RcppEigen]; }; + APML0 = derive2 { name="APML0"; version="0.7"; sha256="1ivlyljyllkd53y3ckar7mrdykmd8fz3sg8i1xgfygrcnq79qz0i"; depends=[Matrix Rcpp RcppEigen]; }; + APPEstimation = derive2 { name="APPEstimation"; version="0.1.1"; sha256="1bg9ma4i3k3xdgyk2h4f368gqnczvlhvjw4114iznmrv1wl4g25c"; depends=[densratio]; }; APSIM = derive2 { name="APSIM"; version="0.9.2"; sha256="0yyjz1kyvqpw9dh71ls2lf44gbb6r7bp9a22mr3z68k89azps5rc"; depends=[data_table lubridate plyr RSQLite sirad stringr]; }; APSIMBatch = derive2 { name="APSIMBatch"; version="0.1.0.2374"; sha256="0j44ijq1v1k60lka9nmw8m1jfjw7pidny9bvswqy5v82gzmwl29d"; depends=[]; }; APfun = derive2 { name="APfun"; version="0.1.2"; sha256="0qw769ifcc7g9jq8ba2sxghcck52cspj3rpg8pkj2i185vg0lw77"; depends=[maptools raster rgdal sp yesno]; }; @@ -78,12 +80,13 @@ in with self; { ARTP = derive2 { name="ARTP"; version="2.0.4"; sha256="1f6ay9lyaqsc33b0larb8v6imp5adaycya84wif2sg32rv4gx3yl"; depends=[]; }; ARTP2 = derive2 { name="ARTP2"; version="0.9.32"; sha256="12mrxssjcj08svdsrxv2nm53mzsgy1k0whd5zzy6fz327bjyqsrz"; depends=[data_table Formula]; }; ARTool = derive2 { name="ARTool"; version="0.10.4"; sha256="1malrjv4myk9nj3dndgpzscfhky4y6lj8xbfg8h2b29g7s2k846q"; depends=[car dplyr lme4 magrittr plyr]; }; - ASICS = derive2 { name="ASICS"; version="1.0.0"; sha256="0hzdffy8vyf5wvk8ba8znl9799084ndz3q7nrvdqsvr2c9dsdff2"; depends=[doParallel foreach ggplot2 plyr quadprog zoo]; }; + ASICS = derive2 { name="ASICS"; version="1.0.1"; sha256="0axjq2a99kl6qk05w5r9ddx3954m60739miarbwadlqwnsd5lkqk"; depends=[doParallel foreach ggplot2 plyr quadprog zoo]; }; ASIP = derive2 { name="ASIP"; version="0.3.2"; sha256="0zrn3hnn46zxmvchicyzy7zz2jnv8y1249a6sdi3w9rw2d8q025g"; depends=[gdalUtils raster rgdal]; }; ASMap = derive2 { name="ASMap"; version="1.0-2"; sha256="0fhivq5i2py79jkwfms0my77p9x8lrkn5vn1lwbsawfkyar4dvkq"; depends=[fields gtools lattice qtl RColorBrewer]; }; ASPBay = derive2 { name="ASPBay"; version="1.2"; sha256="0b1qpyvmj7z10ixrmdxp42bj9s72c1l9rihzmv9p58f12a5aznjz"; depends=[hexbin Rcpp RcppArmadillo]; }; ASSISTant = derive2 { name="ASSISTant"; version="1.2-3"; sha256="072lmvmdi5yfyfda42vs556ciwj2rnka02isnknk6czir3947nck"; depends=[mvtnorm R6]; }; ATE = derive2 { name="ATE"; version="0.2.0"; sha256="1i46ivb7q61kq11z9v1rlnwad914nsdjcz9bagqx17vjk160mc0a"; depends=[]; }; + ATR = derive2 { name="ATR"; version="0.1-0"; sha256="0ljrpix3ksi0v38sfb25s2dlfj1yjbvwcz147dk2v2c24cn3r816"; depends=[partykit]; }; ATmet = derive2 { name="ATmet"; version="1.2"; sha256="047ibxxf5si45zw22zy8a1kpj36q0pd3bsmxwvn0dhf4h65ah0zz"; depends=[DiceDesign lhs metRology msm sensitivity]; }; AUC = derive2 { name="AUC"; version="0.3.0"; sha256="0ripcib2qz0m7rgr1kiz68nx8f6p408l1ww7j78ljqik7p3g41g7"; depends=[]; }; AUCRF = derive2 { name="AUCRF"; version="1.1"; sha256="00d7jcg2dyvf7sc9w7vxxd85m7nsbcmfqsavrv236vxfpfc9yn7i"; depends=[randomForest]; }; @@ -119,26 +122,27 @@ in with self; { AlgebraicHaploPackage = derive2 { name="AlgebraicHaploPackage"; version="1.2"; sha256="1krm5cx609sv2p0g3xm5jaiqs9li06v717lw7ywjvx7myc9x4c07"; depends=[]; }; AlignStat = derive2 { name="AlignStat"; version="1.3.1"; sha256="1x9nlf3z6rpfca3k3cqm673sid418mnl44df9v93nyj5dpd70ylc"; depends=[ggplot2 Rcpp reshape2 seqinr]; }; AllPossibleSpellings = derive2 { name="AllPossibleSpellings"; version="1.1"; sha256="0ksfm2pfjka3yjgcd257v7sns1niaylsfxvhhh2jwdi016cpdw10"; depends=[]; }; - AlleleRetain = derive2 { name="AlleleRetain"; version="1.3.4"; sha256="1jpn497plvgv1f9nwfpp5n765n7jr43cs5kz807a3fld8sjy0x2i"; depends=[]; }; + AlleleRetain = derive2 { name="AlleleRetain"; version="2.0.2"; sha256="0b6h5giskqbjbrk8nf29i75wrhxsjw1c87laiqzrpbp9n717bl20"; depends=[]; }; AlphaVantageClient = derive2 { name="AlphaVantageClient"; version="0.0.1"; sha256="095m850v945lw7i3qd812p28srdb5hdk9h52zf6bkr166zai1ni0"; depends=[httr xts]; }; Amelia = derive2 { name="Amelia"; version="1.7.4"; sha256="0w6532s5xr7pw47zqhhymql7i68c4lralvw1gc26l9d4c7ib00fd"; depends=[foreign Rcpp RcppArmadillo]; }; AmericanCallOpt = derive2 { name="AmericanCallOpt"; version="0.95"; sha256="1nhy44j5bmmjsp6g79nrn741rzzxikhdnxk4wwbdj9igcc1bs573"; depends=[]; }; - AmesHousing = derive2 { name="AmesHousing"; version="0.0.2"; sha256="0grms331mndk86nsyjp9why1ikjx7ycnf9hccvwkxkf86n0519w9"; depends=[dplyr magrittr]; }; + AmesHousing = derive2 { name="AmesHousing"; version="0.0.3"; sha256="1fr01ka8x8gdnky6cbd2bjlh1lx71gzq440zsknn9kxvf01s6pxm"; depends=[dplyr magrittr]; }; AmmoniaConcentration = derive2 { name="AmmoniaConcentration"; version="0.1"; sha256="05pnwfji9l9az4jvni6jy7cayzg5pbspz82a63kmj6rgibn4ywvn"; depends=[]; }; AmostraBrasil = derive2 { name="AmostraBrasil"; version="1.2"; sha256="06y555gl9g89gygrv1rhg8j1bhb38m09mvvw67wvwhdl56j0fqbd"; depends=[foreign RCurl rgdal RJSONIO sp stringr]; }; AmpliconDuo = derive2 { name="AmpliconDuo"; version="1.1"; sha256="1vqpahavsksphxjyhd94dghg9ddskbfbs5vl5qcwl3jkjfvl7lwy"; depends=[ggplot2 xtable]; }; AmyloGram = derive2 { name="AmyloGram"; version="1.1"; sha256="1xdi3i3nw4fzj4d040r55f0gid72gy3vbz5nbdrvapl97zk3kp8c"; depends=[biogram ranger seqinr shiny]; }; AnDE = derive2 { name="AnDE"; version="1.0"; sha256="1yil8ab50wvlqmdla9kmfba8vfgy5r694r6igb58s6vnmld78yf2"; depends=[discretization foreign functional stringr]; }; + AnaCoDa = derive2 { name="AnaCoDa"; version="0.1.1"; sha256="1v8jlyzqp9k084lzmaihp5nh7mybbgnnxnbbfkydq24b9wskfd4b"; depends=[Rcpp]; }; AnalyzeFMRI = derive2 { name="AnalyzeFMRI"; version="1.1-16"; sha256="1mbjb682ns5230jd3vcvd6x4gnn9hpbmjd7r8120y4sp2g733b0f"; depends=[fastICA R_matlab]; }; AnalyzeTS = derive2 { name="AnalyzeTS"; version="2.2"; sha256="0ll4g8yzxhricz56vin8hhyplrmvjmkwfldya41vz6y6bwhywnmb"; depends=[MASS TSA tseries TTR urca]; }; AncestryMapper = derive2 { name="AncestryMapper"; version="2.0"; sha256="1fr2y1a5rn7rq8aly94f618kywix32jwysi70nfhaqx8hf4zzprb"; depends=[svd]; }; - AnglerCreelSurveySimulation = derive2 { name="AnglerCreelSurveySimulation"; version="0.2.1"; sha256="100mbmdllk6c32j75jviz2k9kmwca3jvrqb95a555alfcpkfim8c"; depends=[]; }; + AnglerCreelSurveySimulation = derive2 { name="AnglerCreelSurveySimulation"; version="1.0.0"; sha256="0vkb50v3by5z7qmaqpdb81zmbz23f315k09mpfy7qwsjfdgcpshv"; depends=[dplyr ggplot2]; }; AnnotLists = derive2 { name="AnnotLists"; version="1.2"; sha256="1g2khb2ggniwg2zcjamsm3bxyrl2zabvk540b5vyy9am9k83m1g9"; depends=[]; }; AnnotationBustR = derive2 { name="AnnotationBustR"; version="1.1"; sha256="1pdwb4zmvirbn3aikd66djhzwga18w50krgn43mlw5dpa9c7fvhv"; depends=[ape seqinr]; }; AnnuityRIR = derive2 { name="AnnuityRIR"; version="1.0-0"; sha256="0yvfqzwhm5nhywfhzkxkfm07c0qi6z21j1cdaypz89qn567aj1d9"; depends=[actuar EnvStats fitdistrplus mc2d tseries]; }; AntAngioCOOL = derive2 { name="AntAngioCOOL"; version="1.2"; sha256="1krwms0y3xppc2y4m0az51wcbh4jq7mlr0jwinp66w8gh4k3qnp2"; depends=[caret rJava rpart RWeka]; }; AntWeb = derive2 { name="AntWeb"; version="0.7"; sha256="1ykfg3zzjdvjppr2l4f26lx00cn5vaqhhz1j1b5yh113ggyl40qw"; depends=[assertthat httr leafletR plyr rjson]; }; - AnthropMMD = derive2 { name="AnthropMMD"; version="2.3.0"; sha256="1knxq2r913bgjfpj6j47xan047h0iypv2wp23xn0fimmpfhjsvbn"; depends=[MASS shiny]; }; + AnthropMMD = derive2 { name="AnthropMMD"; version="2.3.3"; sha256="1q8pjxlrba7dna647pkzyj41scq8xghx5h7ac3jamhrkdppf5fdk"; depends=[MASS shiny]; }; Anthropometry = derive2 { name="Anthropometry"; version="1.9"; sha256="1d1grh952kfpanz4vpvdbnx4yn42kkc6z78cc601l70azar2p7zg"; depends=[archetypes biclust cluster depth FNN ICGE nnls rgl shapes]; }; Aoptbdtvc = derive2 { name="Aoptbdtvc"; version="0.0.2"; sha256="1bygvf8vgzz3wa4485x2xxpk784zmw1nwsjjjysm12brrldh8zzh"; depends=[lpSolve MASS]; }; ApacheLogProcessor = derive2 { name="ApacheLogProcessor"; version="0.2.2"; sha256="01h8hi76nlwn9hnfyvzyg2d25s2r0vgpl5rz37yqkhjs5xr3rpyi"; depends=[doParallel foreach stringr]; }; @@ -177,15 +181,18 @@ in with self; { BALCONY = derive2 { name="BALCONY"; version="0.1.8"; sha256="0bnhwz319dy1wc9g2sxb5w2hn8ypzxgaghrg4r82yjl5xig8qmd5"; depends=[Rpdb scales seqinr]; }; BAMBI = derive2 { name="BAMBI"; version="1.1.1"; sha256="1jzvsaf9cn28ny40vg0wlvdqz6f4i7n6iyym8s0aj58aiazwsmh5"; depends=[label_switching Rcpp RcppArmadillo]; }; BAMMtools = derive2 { name="BAMMtools"; version="2.1.6"; sha256="01mb40w3g0xy93pl9064ky8kd46sa7qlz6by1r6kchcfhajx8plv"; depends=[ape gplots Rcpp]; }; + BANEScarparkinglite = derive2 { name="BANEScarparkinglite"; version="0.1.1"; sha256="1xs65drkpd1zmrvyrv0kndd5z5q4y425524w6mrh96qya9qjrmsx"; depends=[dplyr httr lubridate RCurl readr rvest XML xml2 zoo]; }; BANFF = derive2 { name="BANFF"; version="2.0"; sha256="1c5wdwqqvkcm9910lhd387snd7myv9qzs9vfk87vzp3di7hdi4l6"; depends=[coda doParallel DPpackage flexmix foreach GGally igraph mclust network pscl truncnorm]; }; - BANOVA = derive2 { name="BANOVA"; version="1.0.0"; sha256="0yqvdsimryklwgqqn4bmynyaqhw47sjl0dnsf80l8g9g5bvf321y"; depends=[coda rjags rstan runjags]; }; - BART = derive2 { name="BART"; version="1.3"; sha256="1jlch8r9jklfjjlmjmdxsjw8lsqzc1wmgr4b94phlj4cgxxbc8ri"; depends=[Rcpp survival]; }; + BANOVA = derive2 { name="BANOVA"; version="1.1.1"; sha256="11cvf7wjip1vn5qn9hwxvdh98i8li9ijydfywf2ks2hls2430qbk"; depends=[coda rjags rstan runjags]; }; + BART = derive2 { name="BART"; version="1.5"; sha256="0vhyxyp0bbbkyymkwhll8jck3n4mybglshmfs9bycn4xmmm5rq8j"; depends=[Rcpp survival]; }; BAS = derive2 { name="BAS"; version="1.4.7"; sha256="0rpgfzwc41clkdf20mh6wdd2fari84rfgfgzxw04lb3b3s7hz8y4"; depends=[]; }; BASIX = derive2 { name="BASIX"; version="1.1"; sha256="18dkvv1iwskfnlpl6xridcgqpalbbpm2616mvc3hfrc0b26v01id"; depends=[]; }; BASS = derive2 { name="BASS"; version="0.2.2"; sha256="1q3sihp2iv1ikggzgd2k3vh2myz8bz31rzlaavw0n84d0h1zjxy2"; depends=[]; }; + BASiNET = derive2 { name="BASiNET"; version="0.0.2"; sha256="1qik3r52hygxldw3sw0sln7yw7z0bmybavf0kf9fmpkyir0z0xvn"; depends=[Biostrings igraph randomForest rgl rmcfs RWeka]; }; BAT = derive2 { name="BAT"; version="1.5.6"; sha256="0m6yfxymhzi8n2l421ngy6cz3qa5v7yrd1jhpi8ymlnf8dysd57x"; depends=[nls2 raster spatstat vegan]; }; BAYESDEF = derive2 { name="BAYESDEF"; version="0.1.0"; sha256="030xskgqqg0n85mphjv32ks4ysvxb36f6ayy0176gps14jhmhcp7"; depends=[glmnet gWidgets readxl REdaS]; }; BAYSTAR = derive2 { name="BAYSTAR"; version="0.2-9"; sha256="0crillww1f1jvhjw639sf09lpc3wpzd69milah143gk9zlrkhmz2"; depends=[coda mvtnorm]; }; + BAwiR = derive2 { name="BAwiR"; version="1.0"; sha256="0bic9f84cnjka6vk55icjviqr206fmv7lnihvdksnbghgcya890w"; depends=[Anthropometry dplyr ggplot2 ggthemes hrbrthemes httr lubridate magrittr plotly plyr purrr reshape2 rvest rworldmap scales stringi stringr tidyr xml2]; }; BB = derive2 { name="BB"; version="2014.10-1"; sha256="1lig3vxhyxy8cnic5bczms8pajmdvwr2ijad1rkdndpglving7x0"; depends=[quadprog]; }; BBEST = derive2 { name="BBEST"; version="0.1-6"; sha256="1hvgi3679ixpq0c5qbxhkp1j0953k3lklglgxrq9mz2ry6z9n038"; depends=[DEoptim ggplot2 reshape2 shiny wmtsa]; }; BBMM = derive2 { name="BBMM"; version="3.0"; sha256="1cvv786wf1rr5906qg1di2krrv5jgw3dnyl8z2pvs8jyn0kb3fkj"; depends=[]; }; @@ -199,30 +206,30 @@ in with self; { BCE = derive2 { name="BCE"; version="2.1"; sha256="0dqp08pbq7r88yhvlwgzzk9dcdln7awlliy5mfq18j5jhiy7axiz"; depends=[FME limSolve Matrix]; }; BCEA = derive2 { name="BCEA"; version="2.2-5"; sha256="0jiizwnxycbz9x8fmkcw3rcjkgg5b9fawyddf8swvx23cnfm6z8z"; depends=[MASS]; }; BCEE = derive2 { name="BCEE"; version="1.2"; sha256="08jsnsy7l182n0gy2jy0l9a7grr62g57gz3217fzapk2im2q648b"; depends=[BMA leaps Rcpp RcppArmadillo]; }; - BCEs0 = derive2 { name="BCEs0"; version="1.1-1"; sha256="1ipg8xliqnpfa4ga9r0gqf5sfa9gass4hvrlgxazs5hb18fpsl91"; depends=[]; }; BCRA = derive2 { name="BCRA"; version="1.0"; sha256="1bbxh1kf35h31c4k565kk6grdhp5pnn8vr3nr6vnp32dp4pc05zh"; depends=[]; }; BCSub = derive2 { name="BCSub"; version="0.5"; sha256="0c8dlxsx23qfyygmajg2amj78ax01kb3808d9hvy7g3hkgp2i2fp"; depends=[MASS mcclust nFactors Rcpp RcppArmadillo]; }; BCellMA = derive2 { name="BCellMA"; version="0.3.4"; sha256="1njprs7ksv0w18ffs0agz0290aa2akw48225iaa3bjhbl08dpidl"; depends=[ggplot2 reshape2]; }; BCgee = derive2 { name="BCgee"; version="0.1"; sha256="0ad0dj2ymgvkmcmq3jlpmn0pgigdql0xgvcwsbpdydv33a6snr04"; depends=[]; }; + BClustLonG = derive2 { name="BClustLonG"; version="0.1.2"; sha256="0w35pwv3y00pmi4qjnzii3q44k7lk13x0cmh1zq3cl42gpi31p7f"; depends=[lme4 MASS mcclust Rcpp RcppArmadillo]; }; BDWreg = derive2 { name="BDWreg"; version="1.2.0"; sha256="07j6dy69q1as1nwgp2790wzpzmjich2256cddhl7n3h2rs1dja74"; depends=[coda doParallel DWreg foreach MASS]; }; - BDgraph = derive2 { name="BDgraph"; version="2.43"; sha256="1wqc09z6czl9b34yxj7hpf2f16q47dfi44vzmbssqwzai3h26hg4"; depends=[igraph Matrix]; }; - BEACH = derive2 { name="BEACH"; version="1.1.2"; sha256="10533ac575mcw9mv1lf3dgjjaf1hgzv3yn7ys9qi6b2k5fynhsg0"; depends=[devtools DT haven plyr readxl rJava rtf sas7bdat SASxport shiny WriteXLS xtable]; }; + BDgraph = derive2 { name="BDgraph"; version="2.44"; sha256="055pmjf8pgfqih6bxjj34gz7gj78y4z3kldy561z7mi443kwphq6"; depends=[igraph Matrix]; }; BEDASSLE = derive2 { name="BEDASSLE"; version="1.5"; sha256="1bz3lr0waly9vj9adwhmgs3lq7zjdkcbvm3y9rnn72qlrwmv5fbn"; depends=[emdbook MASS matrixcalc]; }; BEDMatrix = derive2 { name="BEDMatrix"; version="1.4.0"; sha256="0aha33skksh45fx248lx6v8cxwgkiripw3avspb8arbld9rmqwxn"; depends=[BH crochet Rcpp]; }; BEQI2 = derive2 { name="BEQI2"; version="2.0-0"; sha256="19q29kkwww5hziffkm2yx7n4cpfcsyh0z4mljdcnjkwfp732sjig"; depends=[jsonlite knitr markdown plyr reshape2 xtable]; }; BEST = derive2 { name="BEST"; version="0.5.0"; sha256="178vn0ps6nr7qjayavnvmbyx6gq57dni5llsncl89kkz633mb2hg"; depends=[coda HDInterval rjags]; }; BETS = derive2 { name="BETS"; version="0.3.3"; sha256="09xgf356casig06q7jys5h55y8kj0ndnr7mkymgzcvni7djc5gq3"; depends=[DBI DT dygraphs forecast foreign ggplot2 grnn htmltools httr lubridate miniUI plotly rjson rmarkdown RMySQL rstudioapi rvest seasonal shiny stringr urca webshot xml2 zoo]; }; BGData = derive2 { name="BGData"; version="1.0.0"; sha256="0xd7xpnvhpyvv6caxyif7wa25llvrnyzmmk4z6rp7absjqbz2alc"; depends=[BEDMatrix bigmemory bit ff LinkedMatrix symDMatrix]; }; + BGGE = derive2 { name="BGGE"; version="0.6.1"; sha256="1ndn4cj9mrkx2mrlh2dgyy3lpx526fmg91zqgvdcbvn99r5sl17j"; depends=[]; }; BGLR = derive2 { name="BGLR"; version="1.0.5"; sha256="14a979rnasaklkfafzpkhr6mqv0ga7fsfxq63scpnlwa2aasgn83"; depends=[]; }; BGPhazard = derive2 { name="BGPhazard"; version="1.2.3"; sha256="1yp92y5y3xh0hb1ring6jrma8g4q6210hm9572j8ji1jkafzxjw1"; depends=[survival]; }; BGSIMD = derive2 { name="BGSIMD"; version="1.0"; sha256="0xkr56z8l72wps7faqi5pna1nzalc3qj09jvd3v9zy8s7zf5r7w4"; depends=[]; }; - BH = derive2 { name="BH"; version="1.65.0-1"; sha256="0n6byzrvl1w4hjdxz479q4a7w1118f9ckqc4gqydq7lgzs5agfl2"; depends=[]; }; + BH = derive2 { name="BH"; version="1.66.0-1"; sha256="14kab6wp0c27d8x4jqyf065p4bj210s9b67c0bfsfjnp29aypn8p"; depends=[]; }; BHH2 = derive2 { name="BHH2"; version="2016.05.31"; sha256="1m4fcx979nbm97hi89vbjjix0sx6qhdzs486risck9bi7yzih5k4"; depends=[]; }; BHMSMAfMRI = derive2 { name="BHMSMAfMRI"; version="1.1"; sha256="1qygizn2np9amkm1f1332zp9ab9ky423plr9lahgwzdxn1c2c5c2"; depends=[AnalyzeFMRI fmri wavethresh]; }; BIEN = derive2 { name="BIEN"; version="1.2.2"; sha256="11bqbkw6v4yvlvpv0bhmn5q7ady12hmp9ziak5jzsc7p4d8azd5r"; depends=[ape DBI rgdal rgeos RPostgreSQL sp]; }; BIFIEsurvey = derive2 { name="BIFIEsurvey"; version="2.3-18"; sha256="0cf5nbqcfvx76v1iia2d48j6dg9sqscmjrl0r835xbssiv9xk5w4"; depends=[miceadds mitools Rcpp RcppArmadillo survey TAM]; }; - BIGDAWG = derive2 { name="BIGDAWG"; version="1.16"; sha256="04l0x8g81ij7varj0s40fsmajfkr630s70f0brv41s4zcznv25sz"; depends=[haplo_stats knitr rmarkdown XML]; }; - BIGL = derive2 { name="BIGL"; version="1.1.0"; sha256="18qsdw3nb3wjrzdr3yg8kfqxbv761c5gc6qg937k8g87wiagrplp"; depends=[ggplot2 MASS minpack_lm numDeriv progress rgl robustbase scales]; }; + BIGDAWG = derive2 { name="BIGDAWG"; version="2.1"; sha256="0zvy5sl94qi20gdrnxb2lmadfy7p0wqfngjsf6jc2cgwyzk4gnrj"; depends=[haplo_stats httr knitr rmarkdown XML]; }; + BIGL = derive2 { name="BIGL"; version="1.1.1"; sha256="008f3x0hkmifra1wcv56hxjjf2rqc9qxsbpi23aq4pgk7mxdaax7"; depends=[ggplot2 MASS minpack_lm numDeriv progress rgl robustbase scales]; }; BIOM_utils = derive2 { name="BIOM.utils"; version="0.9"; sha256="0xckhdvf15a62awfk9rjyqbi6rm7p4awxz7vg2m7bqiqzdll80p7"; depends=[]; }; BIOMASS = derive2 { name="BIOMASS"; version="1.1"; sha256="1qawp10hw7xhqyg9bdwvgxbksiwhga7h6vwp8m7q30ibwfv5kamg"; depends=[httr jsonlite minpack_lm msm raster]; }; BIOdry = derive2 { name="BIOdry"; version="0.5"; sha256="0isvqs2bgirxwb7b1dbn70zfx9b4mw7fp33fwmxq0dx6k1r4f87g"; depends=[ecodist nlme]; }; @@ -237,6 +244,7 @@ in with self; { BMA = derive2 { name="BMA"; version="3.18.7"; sha256="095iwlbjklg1pkp5jiw0srg7jh9cn50g8z4namrs4xsmlh7if65z"; depends=[inline leaps robustbase rrcov survival]; }; BMAmevt = derive2 { name="BMAmevt"; version="1.0.1"; sha256="1krx8isj2wp3panjcbc2ysrc2pxz2casj12qq9p18imaa326l53y"; depends=[coda]; }; BMN = derive2 { name="BMN"; version="1.02"; sha256="12gyq01cn6a9ixqgki1ihx5jrp2gw6jdj7q210rb12xlvj3p6x7w"; depends=[]; }; + BMRBr = derive2 { name="BMRBr"; version="0.1.0"; sha256="1z54annplzydnxvwd0rkhcw5rmfx8r99k28ld5rgh22xq3zdq825"; depends=[rvest xml2]; }; BMRV = derive2 { name="BMRV"; version="1.32"; sha256="1j1cwjk3l7f06nqdwrqdyhzm43bb8hj5wgdd14zc1grxyfc9ya95"; depends=[BH]; }; BMS = derive2 { name="BMS"; version="0.3.4"; sha256="0z3mk1xd1fphf80kdbashkn04jwsr2bghms4d7nav3pw73q41wql"; depends=[]; }; BMT = derive2 { name="BMT"; version="0.1.0.3"; sha256="1vdah5bsn41s2qriq15xi7dw9qzngaacmn5gk6yc7hi89dwyy3yj"; depends=[fitdistrplus partitions]; }; @@ -244,6 +252,7 @@ in with self; { BMhyd = derive2 { name="BMhyd"; version="1.2-8"; sha256="14pv5f621zq5x9i408zjm8k80hcsabkjpdf86gk3ylgw5yqcivrx"; depends=[ape corpcor geiger mvtnorm numDeriv phylobase phytools TreeSim]; }; BMisc = derive2 { name="BMisc"; version="1.1.1"; sha256="1ckliy7pnpx47dqmd6msd5496ddrj05j49al866av5zg9qsr7z4s"; depends=[formula_tools]; }; BNDataGenerator = derive2 { name="BNDataGenerator"; version="1.0"; sha256="17zi83jhpn9ygavkpr9haffvd4622sca18jzzxxxmfq0ilrj201g"; depends=[]; }; + BNN = derive2 { name="BNN"; version="1.0.2"; sha256="13h9xqfdqnc9d8brx1xlmvb4nrkpwncwjz98y7i3wijih85wkikd"; depends=[mvtnorm]; }; BNPMIXcluster = derive2 { name="BNPMIXcluster"; version="1.2.4"; sha256="06s0cs3anbby93n7pjcin9195agfzfq9im6f9k7ih3cbg8mzfaqy"; depends=[gplots MASS matrixcalc mvtnorm plyr Rcpp RcppArmadillo truncnorm]; }; BNPMediation = derive2 { name="BNPMediation"; version="0.1.0"; sha256="0bfsayhhhf60qr8nvs4yhshnb7ank70529abpqdxb506ni67pny1"; depends=[condMVNorm DPpackage mnormt]; }; BNPTSclust = derive2 { name="BNPTSclust"; version="1.1"; sha256="1zmxwg6zn3nqqm1sw2n4pvq47mv7ygb4lf1c6yhn3xaf1rqmf26s"; depends=[MASS mvtnorm]; }; @@ -257,6 +266,7 @@ in with self; { BSDA = derive2 { name="BSDA"; version="1.2.0"; sha256="0gs33yyca45jd4f5k5f7qid4ayw2rnl2wl7a6m7vf39dfx7ympm2"; depends=[e1071 lattice]; }; BSGS = derive2 { name="BSGS"; version="2.0"; sha256="08m8g4zbsp55msqbic4f17lcry07mdn0f5a61zdcy2msn2ihzzf9"; depends=[batchmeans MASS plyr pscl]; }; BSGW = derive2 { name="BSGW"; version="0.9.2"; sha256="1q6qvm9yxh35wywrzs3kr31jsa0bmbwrqh0r3qjc0dzi6q8n6pjy"; depends=[doParallel foreach MfUSampler survival]; }; + BSPADATA = derive2 { name="BSPADATA"; version="1.0"; sha256="1g709i0icxlxq2ljb2sm5iyc8ljqxadi62xc4mg702fsgl0x5ny9"; depends=[mvtnorm pscl spdep]; }; BSSasymp = derive2 { name="BSSasymp"; version="1.2-1"; sha256="0w141yxqpck59n85rjc6d3qy6bwhk1z80zsm21hda0bgfwy9v6wy"; depends=[fICA JADE]; }; BSagri = derive2 { name="BSagri"; version="0.1-8"; sha256="148pr4lkgdi4bwc9lavgj356nh240iazz28xklq14rw4gzhmz2k4"; depends=[boot gamlss MCPAN mratios multcomp mvtnorm]; }; BSquare = derive2 { name="BSquare"; version="1.1"; sha256="1s16307m5gj60nv4m652iisyqi3jw5pmnvar6f52rw1sypfp5n49"; depends=[quadprog quantreg VGAM]; }; @@ -267,6 +277,7 @@ in with self; { BTYDplus = derive2 { name="BTYDplus"; version="1.0.1"; sha256="0x8as4zskpbsvhh8gnvzgp833dkv01cs5fqfva9qri296343kppv"; depends=[bayesm BTYD coda data_table mvtnorm Rcpp]; }; BUCSS = derive2 { name="BUCSS"; version="0.0.2"; sha256="188d9f0gdhym28xvvk5z10amdbg50w6ab4ik2r9qfc3p1v7k10q9"; depends=[]; }; BVS = derive2 { name="BVS"; version="4.12.1"; sha256="111g61bpwh80v6gy44q087swcrnnnzdcibm22pzzi9jsfphy6l0c"; depends=[haplo_stats MASS msm]; }; + BVSNLP = derive2 { name="BVSNLP"; version="0.9.10"; sha256="06q7pdv0jc7q9m5ahyxj5dqv8bjc2zva3gjy8ys139mmv7i37pjv"; depends=[doParallel foreach Rcpp RcppArmadillo RcppEigen RcppNumerical]; }; BWStest = derive2 { name="BWStest"; version="0.2.1"; sha256="1kwd1s1dd21qca31np49aql839j8325y8bnxlcq84nw48vqv0jgc"; depends=[memoise Rcpp]; }; BaBooN = derive2 { name="BaBooN"; version="0.2-0"; sha256="145q2kabjks2ql3m48sfjis5y35l8rcqnr5s176viv9yhfafn351"; depends=[coda Hmisc MASS nnet Rcpp RcppArmadillo]; }; BaM = derive2 { name="BaM"; version="1.0.1"; sha256="0y8m6mhghlrp379swj9cfrzqcdr3a7y29mx4d6zld4is00wdw16b"; depends=[coda dlm MASS mice nnet]; }; @@ -277,12 +288,13 @@ in with self; { Bagidis = derive2 { name="Bagidis"; version="1.0"; sha256="1prdbkc0qgzkkrkhp43pjyg35q9ivngk8wa4a7khlnfsj21jaraf"; depends=[abind]; }; BalanceCheck = derive2 { name="BalanceCheck"; version="0.1"; sha256="09mkssic173glgcn592cb6zmz80kndggqc4hc800f91xnfql0332"; depends=[ade4 mvtnorm]; }; BalancedSampling = derive2 { name="BalancedSampling"; version="1.5.2"; sha256="0a4mb5lwjcy5d3h0ypsqmqniqx3dm64mssj65apgl48wqbm6zvv0"; depends=[Rcpp]; }; + Ball = derive2 { name="Ball"; version="1.0.0"; sha256="1b4p4isgybxid14yywpgl7nv4d126281901wvwx6qwvf40nbfq3l"; depends=[gam survival]; }; BarBorGradient = derive2 { name="BarBorGradient"; version="1.0.5"; sha256="0g2g7hrm23as1xbj79g48r8sj3gsj66fmi895jqlqfbqrl2fl7a5"; depends=[]; }; BarcodingR = derive2 { name="BarcodingR"; version="1.0-2"; sha256="1mn5rdax8v1s2z3apk9z0kzy4hw19m8ql6j91l6wd29g2n2bjqxx"; depends=[ape class nnet sp]; }; Barnard = derive2 { name="Barnard"; version="1.8"; sha256="1ki58hjs5kpmp76kwj1qi6hwmdvjphqb1lvrlhnmkgqxg4hw4vqg"; depends=[]; }; Barycenter = derive2 { name="Barycenter"; version="1.2"; sha256="077b66pj60sryjnd6zkwqdd5hvbqh4pj8r65k4jb2rjvlbqyxln8"; depends=[Rcpp RcppArmadillo]; }; - BatchExperiments = derive2 { name="BatchExperiments"; version="1.4.1"; sha256="0fg7p0q6avc0kcwcd3z4q3akrr2mkrx2yf9zcd6hhz22l3x4aphz"; depends=[BatchJobs BBmisc checkmate DBI plyr RSQLite]; }; - BatchGetSymbols = derive2 { name="BatchGetSymbols"; version="1.2"; sha256="06ndhdsnpc7i367xksghgkwx1m6h6finwj0sab9ivcwpqb4n5h6f"; depends=[curl quantmod rvest stringr]; }; + BatchExperiments = derive2 { name="BatchExperiments"; version="1.4.2"; sha256="0zvcpgzhbna6p37jlf57j7mzrvh5xs5w17janmv9v4210cpbzi1q"; depends=[backports BatchJobs BBmisc checkmate data_table DBI RSQLite]; }; + BatchGetSymbols = derive2 { name="BatchGetSymbols"; version="2.0"; sha256="0jjw7iqlyasyivssmkwkn97al9k8l6bs57zkjwf7hjrj36jfa4x1"; depends=[curl dplyr quantmod rvest stringr tidyr XML]; }; BatchJobs = derive2 { name="BatchJobs"; version="1.7"; sha256="035658marnw57p4f38g99rwmvmb6hpbq0fhlxp3qbw22zfnnkvs9"; depends=[backports BBmisc brew checkmate data_table DBI digest RSQLite sendmailR stringi]; }; BatchMap = derive2 { name="BatchMap"; version="1.0.2.0"; sha256="0v3k4xrmsbyhzgmph8xna11dgpp10yxqmss95asrj6n814jxj19b"; depends=[ggplot2 Rcpp RcppArmadillo reshape2]; }; BayClone2 = derive2 { name="BayClone2"; version="1.1"; sha256="1wprdj22zh8fwqawcv4m2n2y7sqwh2f6m9b0cq0rp4ll774yz30i"; depends=[combinat]; }; @@ -292,7 +304,6 @@ in with self; { BaySIC = derive2 { name="BaySIC"; version="1.0"; sha256="023ji6q1nvksmhp3ny8ad39xxccc0a1rv9iaiaagwavgzzc0pjd9"; depends=[fields poibin rjags]; }; BayesBD = derive2 { name="BayesBD"; version="1.2"; sha256="10ik2lndqgmy6pvdm6cx4fsxgjb2fgi6hlz5ic35ab7fkpi90ka5"; depends=[jpeg mritc png Rcpp RcppArmadillo shiny]; }; BayesBinMix = derive2 { name="BayesBinMix"; version="1.4.1"; sha256="1b18qg0mjbmrilwqffrq33gw04fzask2xgj1bp4cli51cjf2slf7"; depends=[coda doParallel foreach label_switching]; }; - BayesBridge = derive2 { name="BayesBridge"; version="0.6"; sha256="1j03m465pwq0lhbrfvddjglrzs6px7bc89yvfzj776amm7myqd0l"; depends=[]; }; BayesCR = derive2 { name="BayesCR"; version="2.1"; sha256="1qav7l64iqqdvr1v6c7hlzvbx7zbvsa55pyisvkq5rsayy1rdsl1"; depends=[mnormt mvtnorm rootSolve truncdist]; }; BayesCombo = derive2 { name="BayesCombo"; version="1.0"; sha256="01rzjja0xzvqyjivl8a9da13v13ylm4dwv4f27cmgz2znakfg5y8"; depends=[]; }; BayesComm = derive2 { name="BayesComm"; version="0.1-2"; sha256="1rrbvwcfm93cw0m33g0zn6nyshfjc97kb3fby9cga0zaixc0a8rk"; depends=[abind coda mvtnorm Rcpp RcppArmadillo]; }; @@ -300,15 +311,14 @@ in with self; { BayesFM = derive2 { name="BayesFM"; version="0.1.2"; sha256="0fiw2x29cpv3prywsbvs1m8a588s2wpi3bwzzjisi2rafbl619xd"; depends=[checkmate coda ggplot2 gridExtra plyr]; }; BayesFactor = derive2 { name="BayesFactor"; version="0.9.12-2"; sha256="17zfs8bmzp59zaxzcrzis2sxdnqxrv9h1kpb22112mp9l1alvwl4"; depends=[coda gtools Matrix MatrixModels mvtnorm pbapply Rcpp RcppEigen stringr]; }; BayesGESM = derive2 { name="BayesGESM"; version="1.4"; sha256="0qw2byb48f67461m1k8a1rqh6a0c3zq1rc4ni9xzxv8dih4wkq0f"; depends=[Formula GIGrvg normalp]; }; - BayesGOF = derive2 { name="BayesGOF"; version="1.3"; sha256="0cf0aykl1mc5cvifc570dbfvxgq2kgp81a9bs1v23022jgi3i8ph"; depends=[orthopolynom VGAM]; }; + BayesGOF = derive2 { name="BayesGOF"; version="2.1"; sha256="13frvpb3jl8vq1h545k2pbqdj7547k9zipxxiggryvk65l2p4v30"; depends=[orthopolynom VGAM]; }; BayesH = derive2 { name="BayesH"; version="1.0"; sha256="0mjd1i3rkhyq3qcalq0ing0ap0igbhyvczaihl4pcfidgs70bci3"; depends=[]; }; BayesLCA = derive2 { name="BayesLCA"; version="1.7"; sha256="0lsqgjqal9092v1wr07p8g5cqm24k2d80sp7hlr7r1xknakmm1b6"; depends=[coda e1071 fields MCMCpack nlme]; }; - BayesLogit = derive2 { name="BayesLogit"; version="0.6"; sha256="0jygw6wkmb6887qglzhl525v56kb0y8ig0w56dywbd8dmsv967z7"; depends=[]; }; BayesMAMS = derive2 { name="BayesMAMS"; version="0.1"; sha256="1qq3j9nm0k58gpyfavz77v1dwghy8pmpk0v52cj7l8sb3a3aiinm"; depends=[mvtnorm]; }; BayesMed = derive2 { name="BayesMed"; version="1.0.1"; sha256="1ysc7sh0drqxbisi2dz6gj4jlw6qsd879bbhr5pra7nxgmk4h650"; depends=[MCMCpack polspline QRM R2jags]; }; BayesMixSurv = derive2 { name="BayesMixSurv"; version="0.9.1"; sha256="19kf39881q00pap9afwvvggk4s4w3qpz17b7065nig1mvk8dnp8r"; depends=[survival]; }; BayesNI = derive2 { name="BayesNI"; version="0.1"; sha256="0zvr6rkb5zxgl53xby69d0j3yrfnlcmac6kwkxz77q5616w9dwq0"; depends=[]; }; - BayesNetBP = derive2 { name="BayesNetBP"; version="1.2.1"; sha256="03ml9nkcnn183cc06rxiw5fjx5nzkpz16cmkn9rnbyf9305zrwra"; depends=[doBy fields graph gRbase igraph qtl qtlnet RColorBrewer Rgraphviz]; }; + BayesNetBP = derive2 { name="BayesNetBP"; version="1.3.0"; sha256="01blqc48ssgr3dg5bk7yzwpa59n3ja1dggglwm2441dwjxf10vxx"; depends=[bnlearn doBy fields graph gRbase igraph qtl qtlnet RColorBrewer Rgraphviz]; }; BayesPieceHazSelect = derive2 { name="BayesPieceHazSelect"; version="1.1.0"; sha256="0znbmv7crqycdx75jh02h6z8d6cifjszbrldv2yva4mkjxsydag5"; depends=[mvtnorm]; }; BayesPiecewiseICAR = derive2 { name="BayesPiecewiseICAR"; version="0.2.1"; sha256="1qrmw7zmygdzz84p76hyh2d8dx88b8xhbbd7radqm39g35zq5wz6"; depends=[mvtnorm]; }; BayesRS = derive2 { name="BayesRS"; version="0.1.2"; sha256="11xpkq8x4xcpr4kmflr5blq0pn0ssfi9204bs5xfihn7q3d9bzwy"; depends=[coda ggplot2 metRology reshape rjags]; }; @@ -321,20 +331,20 @@ in with self; { BayesTreePrior = derive2 { name="BayesTreePrior"; version="1.0.1"; sha256="13igmvw1wj8kzfijzsrhdqr52kv4vqrm91i71ay6f7jnkry3spaw"; depends=[]; }; BayesTwin = derive2 { name="BayesTwin"; version="1.0"; sha256="026blnhihbx9bpd63mxhbp0kpvj0lwbj7mg72alyfr2jnrh1n3lp"; depends=[coda foreign matrixStats rjags]; }; BayesValidate = derive2 { name="BayesValidate"; version="0.0"; sha256="1gli65avpkb90asx92l1yjbwaxcsyb920idyjwgd2sl2b3l657ly"; depends=[]; }; - BayesVarSel = derive2 { name="BayesVarSel"; version="1.7.1"; sha256="08zhy1brhb4zyishwgsc0hnmplw776d6qvakx39jiwbi02nvwvx9"; depends=[MASS mvtnorm]; }; + BayesVarSel = derive2 { name="BayesVarSel"; version="1.8.0"; sha256="1sf18m4p8zaw2s5fv4p9s99n1n0cgzscgfhm5ngkzif43kwz1l6n"; depends=[MASS mvtnorm]; }; BayesX = derive2 { name="BayesX"; version="0.2-9"; sha256="0p170m8zkaspiah1fdyql9lj9yqg6sl525blzq7wwgx5wx4rvncs"; depends=[coda colorspace maptools shapefiles sp]; }; BayesXsrc = derive2 { name="BayesXsrc"; version="2.1-2"; sha256="114804f6maak5dmwzw4cbigjcdw7c6sgx48af35yrvkspi1gsz3b"; depends=[]; }; BayesianAnimalTracker = derive2 { name="BayesianAnimalTracker"; version="1.2"; sha256="1pgjijqznfdpvw296h5vksnxgspxs7qhy6s84ww7abnlhg59bz5s"; depends=[TrackReconstruction]; }; BayesianGLasso = derive2 { name="BayesianGLasso"; version="0.2.0"; sha256="09yb1qqx6qlsspk3ndrcqxy0956iqznw0rmyvqxgxxp3zd3y21xp"; depends=[MASS statmod]; }; BayesianNetwork = derive2 { name="BayesianNetwork"; version="0.1.3"; sha256="1lli3v922cvp1kwg4sllgvm4rnb972anlpl0lklqk3aqi7ff6flw"; depends=[bnlearn heatmaply lattice networkD3 plotly rintrojs shiny shinyAce shinydashboard]; }; - BayesianTools = derive2 { name="BayesianTools"; version="0.1.3"; sha256="03lvds5hxanygmc46sivh7vin48phr3xs27gdz5f6j5pcm8j8xj5"; depends=[coda DHARMa ellipse emulator IDPmisc MASS Matrix msm mvtnorm numDeriv Rcpp tmvtnorm vioplot]; }; + BayesianTools = derive2 { name="BayesianTools"; version="0.1.4"; sha256="13imh2vc3picfy1ppzfisgkhk2n8w8s0fnhklkni06wz1816h2zd"; depends=[bridgesampling coda DHARMa ellipse emulator IDPmisc MASS Matrix msm mvtnorm numDeriv Rcpp tmvtnorm]; }; Bayesianbetareg = derive2 { name="Bayesianbetareg"; version="1.2"; sha256="0imsz2761ngbnap0vnxks9527la51m5g8gkkn1vrgwis43i6qcgs"; depends=[betareg mvtnorm]; }; Bayesthresh = derive2 { name="Bayesthresh"; version="2.0.1"; sha256="0w26h1ragqcg1i4h7c2y6vd8fig2jb2zrnvvchgg5z2hg9qdplsf"; depends=[coda lme4 MASS matrixcalc mvtnorm VGAM]; }; BaylorEdPsych = derive2 { name="BaylorEdPsych"; version="0.5"; sha256="1kq6nvzdqwawygp7k62lw5hyccsj81jg82hq60yidgxnmmnnf7y2"; depends=[]; }; BcDiag = derive2 { name="BcDiag"; version="1.0.10"; sha256="1gyinmx5wn2kk70hiy28ghilkhfirfjbfqdrqq5h3wfb4khnq6pz"; depends=[fabia]; }; Bchron = derive2 { name="Bchron"; version="4.2.6"; sha256="0i77a72cq6ddpfgs2p0f3bskb03428jxxyq8chjyirsws1amzp92"; depends=[coda ellipse inline MASS mclust]; }; Bclim = derive2 { name="Bclim"; version="3.1.2"; sha256="0dd4fx3rlljj3zb1m8q1bam1bswg497l3y8k0h0mkvjn94b4jbag"; depends=[ggplot2 MASS mclust statmod]; }; - BeSS = derive2 { name="BeSS"; version="1.0.3"; sha256="0qli3p15mp9q5hl7av7dqpdnh9rzn9hxrqabkfh3h2di0vpwv78g"; depends=[glmnet Matrix Rcpp RcppEigen survival]; }; + BeSS = derive2 { name="BeSS"; version="1.0.5"; sha256="1gq0zfrzkh2cndly7amhjy0qnfb60lsj7izmdlf2m8h7yrcicjzv"; depends=[glmnet Matrix Rcpp RcppEigen survival]; }; Benchmarking = derive2 { name="Benchmarking"; version="0.26"; sha256="00w7a16lhra6rjylyj26q67mvgbc3wa27a2wmiwjz5yh7wdnh193"; depends=[lpSolveAPI ucminf]; }; BenfordTests = derive2 { name="BenfordTests"; version="1.2.0"; sha256="1nnj0w0zwcmg7maqmmpixx7alvsyxva370ssc26ahg6kxy5a621w"; depends=[]; }; Bergm = derive2 { name="Bergm"; version="4.1.0"; sha256="13qdcwycppwy9qqc42zi5fz6wg4a47pfczb3nnfj1bdn2drxqw2x"; depends=[coda ergm Matrix MCMCpack mvtnorm network]; }; @@ -349,45 +359,48 @@ in with self; { BiSEp = derive2 { name="BiSEp"; version="2.2"; sha256="1ha7rc1q54dr2xl4bpkiwl703igmmi9qphsgv2h0flq7iz0gr351"; depends=[AnnotationDbi GOSemSim mclust]; }; BiTrinA = derive2 { name="BiTrinA"; version="1.2"; sha256="0q2wqxj2ipmppilhvq80cnvhnhcp26h422i8ghx26nrkswhx378s"; depends=[diptest]; }; BiasedUrn = derive2 { name="BiasedUrn"; version="1.07"; sha256="13i2lgfnjhlbbm2yxfc2l5hswqw6x03pwba5csjmirv8kpjw4xr3"; depends=[]; }; - BibPlots = derive2 { name="BibPlots"; version="0.0.2"; sha256="04j5wmdy464sgv1yz4km9i14i3j95qr3m2vi96nmsy5158ga9ilz"; depends=[]; }; + BibPlots = derive2 { name="BibPlots"; version="0.0.3"; sha256="06cpz4h57mz5vpapgsrc9g67dkkiabp1n6avnccvgcpzjr0zscsw"; depends=[]; }; BigQuic = derive2 { name="BigQuic"; version="1.1-7"; sha256="1bhi9dilrprgjvqyc2hb4a0y8rm9la0m5lgry9mf184p56z1syzb"; depends=[Matrix Rcpp scalreg]; }; BigSEM = derive2 { name="BigSEM"; version="0.2"; sha256="091fdibcxd8a8kf9k4pvc1sah830wh179f28gag9g816h4qclnx9"; depends=[MASS parcor]; }; BigTSP = derive2 { name="BigTSP"; version="1.0"; sha256="1jdpa8rcnrhzn0hilb422pdxprdljrzpgr4f26668c1vv0kd6k4v"; depends=[gbm glmnet randomForest tree]; }; BigVAR = derive2 { name="BigVAR"; version="1.0.2"; sha256="14vb6nc6bn22dd112sg9zypkchmkv17gnwxs915k0k5vbb9czlr5"; depends=[lattice MASS Rcpp RcppArmadillo RcppEigen zoo]; }; BimodalIndex = derive2 { name="BimodalIndex"; version="1.1.5"; sha256="08hkdpvwvi5vczc9hdzbk5qnr6s44wyf6n0xv0zbd51dqcmv2xbk"; depends=[mclust oompaBase]; }; - BinNonNor = derive2 { name="BinNonNor"; version="1.3"; sha256="0lxhfys066wz8svr9mjb28rd85lhjicqw4py4j96w9zgi974ha51"; depends=[BB corpcor Matrix mvtnorm]; }; - BinNor = derive2 { name="BinNor"; version="2.1"; sha256="14b90y40wzqwaf1v1l92s17j0kggbcsg5c90l1r7wi3j4xcl20pc"; depends=[corpcor Matrix mvtnorm psych]; }; - BinOrdNonNor = derive2 { name="BinOrdNonNor"; version="1.3"; sha256="18cks0hh6a49jr1yq0pwgw3scy1b7cl2060miwxswpwry9lcnnn5"; depends=[BB corpcor GenOrd Matrix mvtnorm OrdNor]; }; + BinNonNor = derive2 { name="BinNonNor"; version="1.4"; sha256="00405ww9mh910jqww60w7cb8qbjql2jn13m60ly0bnxilg44r0bb"; depends=[BB corpcor Matrix mvtnorm]; }; + BinNor = derive2 { name="BinNor"; version="2.2"; sha256="03cggpk9fhndnk9vv5i6fzsq4wjxc5405xxlxg3l9gb618kj437f"; depends=[corpcor Matrix mvtnorm psych]; }; + BinOrdNonNor = derive2 { name="BinOrdNonNor"; version="1.4"; sha256="0qiy0wf9i9r44ycz1jl666nwpsv5yz7vzz1szdy22sk68lz984bv"; depends=[BB corpcor GenOrd Matrix mvtnorm OrdNor]; }; Binarize = derive2 { name="Binarize"; version="1.2"; sha256="014iagr76y3v7ljn6zlbg1hxwbwdi889bqxa7hwmqrcybnla22ja"; depends=[diptest]; }; BinaryEMVS = derive2 { name="BinaryEMVS"; version="0.1"; sha256="1ainp6pg481yqhjc4f1pkxzxczbi3qm0kgq280vndq859ldfkpnh"; depends=[]; }; BinaryEPPM = derive2 { name="BinaryEPPM"; version="2.1"; sha256="1f4y1mrscy9z87yglbynnsis623ar0gqpda3dfm9isa2z10c24qr"; depends=[expm Formula lmtest numDeriv]; }; BinarybalancedCut = derive2 { name="BinarybalancedCut"; version="0.2"; sha256="1rs7x7ggqzaz9r2912g0fi9x7przd8gjy6pianx457w5f39fqx4v"; depends=[ggplot2 reshape2]; }; + BioCircos = derive2 { name="BioCircos"; version="0.3.3"; sha256="0l8kd1imb8022n631psm9na0vp502ndn2q7m3mshx9c0mnqsv8n3"; depends=[htmlwidgets jsonlite plyr RColorBrewer]; }; BioFTF = derive2 { name="BioFTF"; version="1.2-0"; sha256="03r6fhpc4dqrcnbl73j9kav1l7rblgfldpbkl2p367vv20xggqih"; depends=[]; }; BioGeoBEARS = derive2 { name="BioGeoBEARS"; version="0.2.1"; sha256="0wyddc5ma47ljpqipfkwsgddp12m9iy4kqwwgklyhf0rqia56b1h"; depends=[ape cladoRcpp FD gdata optimx phylobase plotrix rexpokit xtable]; }; - BioInstaller = derive2 { name="BioInstaller"; version="0.3.1"; sha256="0sdn9832dlgsj7nr6jhjndmqjam98610rfiai0101jjcg8wbq64i"; depends=[configr devtools futile_logger git2r R_utils RCurl rvest stringi stringr]; }; + BioInstaller = derive2 { name="BioInstaller"; version="0.3.3"; sha256="0mr3qyabr4pwz4cjnig5nzbq0hqqd9rmrpnhmgb1gp3c6l013yk1"; depends=[configr devtools futile_logger git2r R_utils RCurl rvest stringi stringr]; }; BioMark = derive2 { name="BioMark"; version="0.4.5"; sha256="1ifc72bayy3azbilajqqzl0is6z7l1zaadchcg3n8lhmjrv5sk3m"; depends=[glmnet MASS pls st]; }; BioPET = derive2 { name="BioPET"; version="0.2.1"; sha256="0pwkgffm8hlgvpk3dfzskl50kp9b4rnxc8aj119kwrmlfazhhl50"; depends=[ggplot2 gridExtra pROC VGAM]; }; BioPhysConnectoR = derive2 { name="BioPhysConnectoR"; version="1.6-10"; sha256="1cc22knlvbvwsrz2a7syk2ampm1ljc44ykv5wf0szhnh75pxg13l"; depends=[matrixcalc snow]; }; BioStatR = derive2 { name="BioStatR"; version="2.0.0"; sha256="1k3z337lj8r06xgrqgi5h67hhkz2s5hggj6dhcciq26i1nzafsw6"; depends=[ggplot2]; }; Biocomb = derive2 { name="Biocomb"; version="0.3"; sha256="0shhsljg0knfp83b3hrs2c674sqx2348h5m99jhf19jf1i98pf1k"; depends=[arules class e1071 FSelector gtools MASS nnet pamr pROC randomForest Rcpp rgl ROCR rpart RWeka]; }; Biodem = derive2 { name="Biodem"; version="0.4"; sha256="0k0p4s21089wg3r3pvyy9cxsdf4ijdl598gmxynbzvwpr670qnsh"; depends=[]; }; - BiodiversityR = derive2 { name="BiodiversityR"; version="2.8-4"; sha256="18g283cs9fz5nscni4kaai6z7w0p2g619n3wzdz6kqmjdafy6bhv"; depends=[Rcmdr vegan]; }; + BiodiversityR = derive2 { name="BiodiversityR"; version="2.9-1"; sha256="16v21svrkhpxd4qb1ayh29c0zrfqm4m4fzfsg1zaw07ham2x1y90"; depends=[Rcmdr vegan]; }; Biograph = derive2 { name="Biograph"; version="2.0.6"; sha256="0vklqwbifbac3v9ws9fs22yxpqqk5b3m96qzr8j0irnimb5kgh5p"; depends=[Epi etm ggplot2 lubridate msm mstate mvna plyr reshape survival]; }; - Biolinv = derive2 { name="Biolinv"; version="0.1-1"; sha256="1fnx9fcybw8agc2zba61lk4ygq8qi3b747i5cnh1b3vh6dw5fapq"; depends=[classInt fields raster sp spatstat]; }; + Bioi = derive2 { name="Bioi"; version="0.2.9"; sha256="0kvqvvaws1zc3npxvl3jqidak24n5y8n98ml44mkbh7c5n296z2p"; depends=[assertthat dplyr igraph Rcpp]; }; + Biolinv = derive2 { name="Biolinv"; version="0.1-2"; sha256="0g9vw1jcsjawmddkixssm5gbncy17fdd6a3c5b2qd4hx81kxz8q9"; depends=[classInt fields raster sp spatstat]; }; Bios2cor = derive2 { name="Bios2cor"; version="1.2"; sha256="00fzvj20x85gcpb9l6rfnm3qml8nnl365z1a68j90qi14wy6dfh6"; depends=[bigmemory bio3d circular igraph]; }; - BisRNA = derive2 { name="BisRNA"; version="0.2.1"; sha256="1sjx53lkdhiygr2w7drs9c47hnmv2s232bsd96d6k2xn6yai593i"; depends=[knitr MASS]; }; + BisRNA = derive2 { name="BisRNA"; version="0.2.2"; sha256="11jl5109nlm272vncprwplkz4kpvg7yx6yfnbjg47lfrsxcj8n0g"; depends=[MASS]; }; BivRegBLS = derive2 { name="BivRegBLS"; version="1.0.0"; sha256="1fi399vv54dnfywxbc8yb1r58lrl7zpqkahvcx3f5svjy20dvvbw"; depends=[ellipse]; }; - BivUnifBin = derive2 { name="BivUnifBin"; version="1.1"; sha256="0dxkk3pjnbjx04r9870lcr3hl4r5j7cd3y1fn800fz0qjnv5dahd"; depends=[BinOrdNonNor rootSolve]; }; + BivUnifBin = derive2 { name="BivUnifBin"; version="1.2"; sha256="0m4a2m7lvlm02hqqigwg3cd6sjzxnxqw1mchxj5g19whk34vwkwi"; depends=[BinOrdNonNor rootSolve]; }; BivarP = derive2 { name="BivarP"; version="1.0"; sha256="08f7sphylaj3kximy1avaf29hxj2n800adsnssh01p9bcxnzb2i4"; depends=[copula dfoptim survival]; }; + Bivariate_Pareto = derive2 { name="Bivariate.Pareto"; version="1.0.0"; sha256="0m5a41q56z6v0681y9093n5rdd33mg4fc904wjkqznlb4kn1156x"; depends=[]; }; BlakerCI = derive2 { name="BlakerCI"; version="1.0-5"; sha256="16zj678qzwqih92q19dma7a602d0hif2dhii5hvxdgjymg7hg2bj"; depends=[]; }; BlandAltmanLeh = derive2 { name="BlandAltmanLeh"; version="0.3.1"; sha256="11p30zqb3f9ifk3v18dspg18sclz5zxjygy7hw8ccb4bcqhx68lm"; depends=[]; }; Blaunet = derive2 { name="Blaunet"; version="2.0.7"; sha256="19p2rqbg44pi0dz2iimjgr69zyrjf0dfsic6spph81dyrri1zyvh"; depends=[cairoDevice ergm foreign gWidgets gWidgetsRGtk2 haven network plot3D plot3Drgl rgl RGtk2 sna statnet_common]; }; + BlockFeST = derive2 { name="BlockFeST"; version="1.3"; sha256="062x7lrcpkd15j3ar58j1gssbd0h66dym7c004jf0k040dkk0z43"; depends=[BASIX]; }; BlockMessage = derive2 { name="BlockMessage"; version="1.0"; sha256="1jrcb9j1ikbpw098gqbcj29yhffa15xav90y6vpginmhbfpwlbf4"; depends=[]; }; - Blossom = derive2 { name="Blossom"; version="1.4"; sha256="0002rvz0mlwl2clglzqldg0x5l8lj07qh74ifpdaf1lrdailh328"; depends=[]; }; Bmix = derive2 { name="Bmix"; version="0.6"; sha256="17swhn2p7jv29fkspacg2v181lkc9yd3xww2fx31xs8hsndcm857"; depends=[mvtnorm]; }; - BoSSA = derive2 { name="BoSSA"; version="2.3"; sha256="0662qhx1q4gr8n9vifm6fp0sv92gs33ji5ph8bi7hpkbvq7584pl"; depends=[ape jsonlite phangorn plotrix RSQLite]; }; + BoSSA = derive2 { name="BoSSA"; version="3.1"; sha256="1d6g7rfmva09y0nzh99y7wwbk7kac50xvk6il65iwfln2427v9ns"; depends=[ape jsonlite phangorn plotrix RSQLite]; }; BoardGames = derive2 { name="BoardGames"; version="1.0.0"; sha256="1w3ghs29qlnjrd46lvv055snclwwy6a22fgdqszqm377w4favnhm"; depends=[]; }; - Bolstad = derive2 { name="Bolstad"; version="0.2-34"; sha256="0snqy580glwpv37hvjnivb3f06hf2prqply1nj5ks5aryabiiz59"; depends=[mvtnorm]; }; + Bolstad = derive2 { name="Bolstad"; version="0.2-36"; sha256="0y33664wkl0z61v6k8j9ww4a8kb1mlaaq9ippp9qggdjgbqc8rqz"; depends=[mvtnorm]; }; Bolstad2 = derive2 { name="Bolstad2"; version="1.0-28"; sha256="08cfadvl9jl9278ilsf8cm2i2a3i8zsa2f3vjzw2nlv85fwi2c7v"; depends=[]; }; BonEV = derive2 { name="BonEV"; version="1.0"; sha256="0lmgrg53b0abb5hidyjjmwn7lf2ani84k9fil7g6j6mdajjhh1b7"; depends=[qvalue]; }; BoolFilter = derive2 { name="BoolFilter"; version="1.0.0"; sha256="14z4fzf8p4wgi939qs6v39a3xizccjcx7j4szsydllpkvxbwggbw"; depends=[BoolNet Rlab]; }; @@ -407,12 +420,13 @@ in with self; { Brobdingnag = derive2 { name="Brobdingnag"; version="1.2-4"; sha256="1saxa492f32f511vw0ys55z3kgyzhswxkylw9k9ccl87zgbszf3a"; depends=[]; }; BrownDog = derive2 { name="BrownDog"; version="0.2.1"; sha256="0wnf1jcf4cakbvj9j1l7jk9mq7gd4j1il1ha2vglghqn04f27938"; depends=[httpuv jsonlite RCurl]; }; Brq = derive2 { name="Brq"; version="2.0"; sha256="0j6d1m2drzy1wyr5y25qb8gs6555vh0lkyh415kw17x9dj4ks0zx"; depends=[]; }; - Brundle = derive2 { name="Brundle"; version="1.0.5"; sha256="18r54afnh8lylly89qpsgy39r81qkpijx482p62m2dsswhfhj022"; depends=[DESeq2 DiffBind lattice Rsamtools]; }; - BsMD = derive2 { name="BsMD"; version="2013.0718"; sha256="1yvazqlbmm221r7nkhrhi309gkk6vx7ji5xlvf07klya2zg20gcj"; depends=[]; }; + Brundle = derive2 { name="Brundle"; version="1.0.8"; sha256="1yj196x6xb75qgi16pgg3dyjmxmjklfjcpxymaki32drhmylf24z"; depends=[DESeq2 DiffBind lattice Rsamtools]; }; + BsMD = derive2 { name="BsMD"; version="2013.0718-1"; sha256="06w1dl5zp1cgjhk3m2zz6xsmcfwdk6ar3gmxdn96v71mqnhv81v1"; depends=[]; }; + BullsEyeR = derive2 { name="BullsEyeR"; version="0.2.0"; sha256="1p8b5w818zi7zs0n13cc3sw8z0z9mfr5cn5y5icsx1jam5amppci"; depends=[Matrix NLP slam tm topicmodels]; }; BurStFin = derive2 { name="BurStFin"; version="1.02"; sha256="16w2s0bg73swdps9r0i8lwvf1najiqyx7w7f91xrsfhmnqkkjzka"; depends=[]; }; BurStMisc = derive2 { name="BurStMisc"; version="1.1"; sha256="0cyi42zkn2dby162x9f95b3hpqxbzx25s7nahb4p86r60xj3a5c0"; depends=[]; }; BuyseTest = derive2 { name="BuyseTest"; version="1.0"; sha256="1nfj2ajah2dg1p47g2z0zf9s24sxj4dfn3nny1h4qmqwcb4vs55g"; depends=[data_table lava Rcpp RcppArmadillo snowfall survival]; }; - C50 = derive2 { name="C50"; version="0.1.0-24"; sha256="17ay0rbm2cg2s27mh09xg0knk7idx6f761sc849m41vsc6pfhzk1"; depends=[partykit]; }; + C50 = derive2 { name="C50"; version="0.1.1"; sha256="1pq1plsh7kf45f0ghrja0xjikaxgvq14k8k80ml5rkabyv11zg03"; depends=[Cubist partykit]; }; CADFtest = derive2 { name="CADFtest"; version="0.3-3"; sha256="06bwv728ckalzibxginzfica24w18m4g87i0i064m3q89ghmnlqm"; depends=[dynlm sandwich tseries urca]; }; CADStat = derive2 { name="CADStat"; version="3.0.8"; sha256="0wdglw1vyd5gz70r9ma0mwshvizv39nb4ahp8pvr70c4qqzsfhc0"; depends=[bio_infer car gdata gmodels JavaGD JGR lattice MASS quantreg rJava rpart XML]; }; CAISEr = derive2 { name="CAISEr"; version="0.2.1"; sha256="1y070r50vhs5ri91zw28wr8nkiq15n9dpjggi6hs601a0bj7463v"; depends=[assertthat]; }; @@ -428,12 +442,12 @@ in with self; { CARLIT = derive2 { name="CARLIT"; version="1.0"; sha256="04kpjfps4ydf8fj75isqp16g1asdsyf8nszhbfkpw1zxkrmiksyp"; depends=[]; }; CARS = derive2 { name="CARS"; version="0.2"; sha256="1n8p4n9fbl20jps9g9pbspw54hq9y6kqbggc8h0i9pbm1b25ngrg"; depends=[np]; }; CARrampsOcl = derive2 { name="CARrampsOcl"; version="0.1.4"; sha256="1sdrir7h7xl1imipm9b71vca062dxqsqd8mg3w9f3s80x2aghxl8"; depends=[fields OpenCL]; }; + CAST = derive2 { name="CAST"; version="0.1.0"; sha256="0mihpcknwk86m41x14j2g3f2s2ya20sh99ng85rcph57a4v6ar05"; depends=[caret]; }; CATT = derive2 { name="CATT"; version="2.0"; sha256="12xdspl1gbf51snyrl44nn7alfyccdfihibkgvzr66lrby8b8fhg"; depends=[]; }; CATTexact = derive2 { name="CATTexact"; version="0.1.0"; sha256="0mklkmay9ph4d0z2l1gcg0lj429xkyhmz7srdil5rgwqxx9dnqs8"; depends=[]; }; - CATkit = derive2 { name="CATkit"; version="3.0.0.2"; sha256="1afaa1s8clynpna9hwgbgfdp5jciv0n5q9vb27cgyl9n69nla991"; depends=[magic MASS png rtf season signal]; }; + CATkit = derive2 { name="CATkit"; version="3.2.3"; sha256="1vl60m6x3mqgghqzpxq8aalpjpcagamjk5zg62mqpwx0vgdwv2fy"; depends=[assertr magic MASS png rtf season signal]; }; CAvariants = derive2 { name="CAvariants"; version="3.4"; sha256="1mrqvcgnxbzah7vhqqqdygds8plwswd2l8w0aq5132byhhc4kiax"; depends=[]; }; CBCgrps = derive2 { name="CBCgrps"; version="2.1"; sha256="0cvgcpvdvpvjkzkwapx0y4a666xq54dwm00w4w9n8fhgp05mnkn8"; depends=[nortest]; }; - CBPS = derive2 { name="CBPS"; version="0.15"; sha256="0mlv5z400yia9gdv3mfq75197xci57l1231k1j3x8qnqyghjsynh"; depends=[glmnet MASS MatchIt nnet numDeriv]; }; CCA = derive2 { name="CCA"; version="1.2"; sha256="00zy6bln22qshhlll0y0adnvb8wa1f7famqyws71b6pcnwxki5ha"; depends=[fda fields]; }; CCAGFA = derive2 { name="CCAGFA"; version="1.0.8"; sha256="1jxb6d1h5p97wnr45s1fsspksqn771nib415ihxi4vj5w8s94j8b"; depends=[]; }; CCM = derive2 { name="CCM"; version="1.1"; sha256="0gya1109w61ia6cq3jg2z5gmvjkv9xg71l2rxhrrf6bx1c2nsrq6"; depends=[]; }; @@ -451,9 +465,9 @@ in with self; { CDVineCopulaConditional = derive2 { name="CDVineCopulaConditional"; version="0.1.1"; sha256="1wyy324vrwipdsq0p021bj1gdhyxg09g3dkw8wv5v6rfrrs84m9k"; depends=[combinat VineCopula]; }; CEC = derive2 { name="CEC"; version="0.9.4"; sha256="194n190szwzxjxfdhiah1f50vp6n7f3q567yky7pq1x2hngna5rs"; depends=[]; }; CEGO = derive2 { name="CEGO"; version="2.2.0"; sha256="0k01fb8bciq3m2rcqcicrlhx6av46sdczgcyn8df1f3pr28l1fyf"; depends=[DEoptim fastmatch MASS Matrix ParamHelpers quadprog]; }; + CENFA = derive2 { name="CENFA"; version="0.1.0"; sha256="1bxrqvi67s93mvkbigb8l7rrn2j2ix7qw7vcxf4dbwd7xf3qqv6q"; depends=[doSNOW foreach magrittr pbapply raster Rcpp snow sp]; }; CEoptim = derive2 { name="CEoptim"; version="1.2"; sha256="0bbjrhl63cbx1rsr5gclbqhjpnjid8ynk2ygaf1chf8z381n7650"; depends=[MASS msm sna]; }; CFC = derive2 { name="CFC"; version="1.1.0"; sha256="0yhb314qcdxig5vg0nbzvsqiddlsqlm50vzddhpp0z5n3xfa7h2c"; depends=[abind doParallel foreach Rcpp RcppArmadillo RcppProgress survival]; }; - CGManalyzer = derive2 { name="CGManalyzer"; version="1.0"; sha256="1djy7qc50ndxcz0chzjdl3f3cp3ffsm9s84mgwgql49qj8k9wib4"; depends=[]; }; CGP = derive2 { name="CGP"; version="2.0-2"; sha256="1mggv3c8525vbdfdc3yhpp4vm4zzdvbwyxim29zj0lzwjf9fkgqk"; depends=[]; }; CHAT = derive2 { name="CHAT"; version="1.1"; sha256="1hl4xr4lkvb7r36gcbgax6ipqc3rsvn1r03w7fk9gf9bbyg7bkhg"; depends=[DNAcopy DPpackage]; }; CHCN = derive2 { name="CHCN"; version="1.5"; sha256="18n8f002w0p0l1s5mrrsyjddn10kdbb6b7jx1v9h1m81ifdbv0xb"; depends=[bitops RCurl]; }; @@ -466,17 +480,18 @@ in with self; { CIEE = derive2 { name="CIEE"; version="0.1.0"; sha256="1z4061rkryhnhf6qdxlna1w2dsy06pipx3sk1hswah4i2n7cc7sq"; depends=[survival]; }; CIFsmry = derive2 { name="CIFsmry"; version="1.0.1.1"; sha256="1m2m2zvg9ghy3bm2sll7jp4xm2vw58kc5xaxd2c9k82771m3a4j0"; depends=[]; }; CINID = derive2 { name="CINID"; version="1.2"; sha256="0pkgzi2j0045p10kjvnq8f4j1agzrqfw0czvvfrzj9yjfpj8xc99"; depends=[]; }; - CINNA = derive2 { name="CINNA"; version="1.1.2"; sha256="1k16a7wy3n6bfqrvw3hs7vxawpy3cpy95v3jfagasp70r4cir9q4"; depends=[centiserve corrplot dendextend factoextra FactoMineR GGally ggplot2 igraph network pheatmap plyr qdapTools Rtsne sna viridis]; }; + CINNA = derive2 { name="CINNA"; version="1.1.3"; sha256="0y2xymk323xjkwpii1i13q38dsfi1ywlvw3ykq4928jb58f96121"; depends=[centiserve circlize corrplot dendextend factoextra FactoMineR GGally ggplot2 igraph network pheatmap plyr qdapTools Rtsne sna viridis]; }; CINOEDV = derive2 { name="CINOEDV"; version="2.0"; sha256="0fjpxahc55zd972p3hlw9fk4dq8hpq715xff8p98kfh29dvw9mnz"; depends=[ggplot2 igraph R_matlab reshape2]; }; CITAN = derive2 { name="CITAN"; version="2015.12-2"; sha256="08h91q7529q04izgqw3ahm4r0zjpwnwyc0vynykvv9fz2fkbk7wb"; depends=[agop DBI hash RGtk2 RSQLite stringi]; }; CIplot = derive2 { name="CIplot"; version="1.0"; sha256="0hx3dn7d8hvsh75747d9046iqriy3bjnchph8xllnvlhkrm4di1f"; depends=[MASS multcomp]; }; - CLME = derive2 { name="CLME"; version="2.0-6"; sha256="0cd3sn6amariap04lhc2kwsdcj4i4axrx95xr10spykr8py4skmc"; depends=[isotone lme4 MASS nlme openxlsx prettyR shiny stringr]; }; + CLA = derive2 { name="CLA"; version="0.90-1"; sha256="1rpklm21i9rjw0vfhaz9brq9571yjynwfhpv6dp6fbl3cj7bwb8g"; depends=[]; }; + CLME = derive2 { name="CLME"; version="2.0-9"; sha256="11kwk3v5kbk1k2gsglpvlq6nyh0b0qd97jpqcv1s2swx12pzdxqc"; depends=[isotone lme4 MASS nlme openxlsx prettyR shiny stringr]; }; CLSOCP = derive2 { name="CLSOCP"; version="1.0"; sha256="0rkwq9rl2ph4h5zwb2i3yphjyzxmh6b6k23a8gcczycx6xdq4yhw"; depends=[Matrix]; }; CMC = derive2 { name="CMC"; version="1.0"; sha256="1r9a5k79fyw01yiwxq02327hpn4l1v2lp0958jj9217wxmhn3pr5"; depends=[]; }; CMF = derive2 { name="CMF"; version="1.0"; sha256="0hvqcbmg2vd0i1rjb1m1bkrbv2vkj1siank1v8w0n5b6881cyz7q"; depends=[Rcpp]; }; CMPControl = derive2 { name="CMPControl"; version="1.0"; sha256="0cp29cibiydawsl0cq433l9abdivr16b431zlrh45wzr5kzfcs0v"; depends=[compoisson]; }; - CMatching = derive2 { name="CMatching"; version="1.0"; sha256="1qvixshdkv1sgy4ianfcvb4mfnc05rwm7hxs3rssnma7m9j3g2np"; depends=[lme4 lmtest Matching multiwayvcov]; }; - CMplot = derive2 { name="CMplot"; version="3.2.1"; sha256="0gnqqw59xsjq671kiykj8k1qx1m2j7hj8dsnh7ccirpq55hqajff"; depends=[]; }; + CMatching = derive2 { name="CMatching"; version="2.0"; sha256="0g8hiag51cqj0wy7lbaa5x4xbnyb74s5xiws6pwxhrvbp3ym69bs"; depends=[lme4 lmtest Matching multiwayvcov]; }; + CMplot = derive2 { name="CMplot"; version="3.3.1"; sha256="01qpy7bb3503i3b8v4psrxbx9ff5vzcv54j55mdr1bphwmnp1kzq"; depends=[]; }; CNLTreg = derive2 { name="CNLTreg"; version="0.1"; sha256="1fjc45kv2nm902vpfynfxj0n7nm2prazm44nhg2m30vd6l1ijisv"; depends=[adlift miscTools nlt]; }; CNLTtsa = derive2 { name="CNLTtsa"; version="0.1"; sha256="0s98ckg6ms3kh49b8la2d8rsdb0m4m0v8gdbj48nqxncdvg25qk4"; depends=[adlift CNLTreg fields nlt]; }; CNOGpro = derive2 { name="CNOGpro"; version="1.1"; sha256="1frsmhfqrlg1vsa06cabqmrzngq4p5gqwyb9qgnsgg81a9ybm6l8"; depends=[seqinr]; }; @@ -486,39 +501,38 @@ in with self; { CNull = derive2 { name="CNull"; version="1.0"; sha256="14hy86zg18hqxi63bfzrpkz70yrzfxp2v2pva5xnrvx9dmlyz820"; depends=[ape Matrix PhyloMeasures Rcpp]; }; COBRA = derive2 { name="COBRA"; version="0.99.4"; sha256="1r1cw12d7c148pcgcg08bfsr1q1s736kfpyyss6b4d7ny7wgmqy4"; depends=[]; }; COCONUT = derive2 { name="COCONUT"; version="1.0.2"; sha256="1qjrhxn6dkxyimdca3nslaiw3hncfpk1pk4v01mcrnz550z001nz"; depends=[]; }; - COMBAT = derive2 { name="COMBAT"; version="0.0.2"; sha256="1sda41db8h5gi7gqq0hj433dd6lh4xj75skjgmgqa3p80rndw461"; depends=[corpcor mvtnorm]; }; + COMBAT = derive2 { name="COMBAT"; version="0.0.4"; sha256="0m700pl33frdpc9y16y4zyh1ixpardh0r5kmz8a78jrh1acn30id"; depends=[corpcor mvtnorm]; }; COMBIA = derive2 { name="COMBIA"; version="1.0.5"; sha256="0f4p2gb16bb46jcdmzlaaicymqnw18c7qc39m0s5jwps4c8whyym"; depends=[gdata hash lattice latticeExtra oro_nifti]; }; COMPoissonReg = derive2 { name="COMPoissonReg"; version="0.4.1"; sha256="14gjrf2hj7dy4hd0qnh6vqjzh7gc6g7gm7rh1d8dingkjwmjzrqb"; depends=[]; }; CONDOP = derive2 { name="CONDOP"; version="1.0"; sha256="0si9nm93wk9lif3r6jh2nxr4sjq1iqyfavbykja3zcy6yn05i19s"; depends=[earth GenomeInfoDb GenomicRanges IRanges mclust plyr randomForest rminer S4Vectors seqinr]; }; CONS = derive2 { name="CONS"; version="0.1.1"; sha256="0w0rca4z3hij0lbabpdnhv2lb52gx574g7bqp6q16772pi4685hf"; depends=[FactoMineR gridExtra gWidgets pander raster readxl REdaS]; }; CORE = derive2 { name="CORE"; version="3.0"; sha256="0wq9i7nscnzqiqz6zh6hglm7924261bw169q3x6l9i6jgqhvn32d"; depends=[]; }; - CORElearn = derive2 { name="CORElearn"; version="1.51.2"; sha256="0ifj7b29ij8ab96j733afkracwxpz5skcg9j3y9v21ny775l9cps"; depends=[cluster nnet rpart]; }; + CORElearn = derive2 { name="CORElearn"; version="1.52.0"; sha256="01kby6kddfbv6qhmsja1q4gyqq57f7n9kk4555g258f9a6900c2n"; depends=[cluster nnet rpart]; }; CORM = derive2 { name="CORM"; version="1.0.2"; sha256="0g5plafx2h1ija8jd6rxvy8qsrqprfbwbi1kq1p4jdr9miha20nv"; depends=[cluster limma]; }; COSINE = derive2 { name="COSINE"; version="2.1"; sha256="10ypj849pmvhx117ph3k1jqa62nc4sdmv8665yahds7mh0ymhpjj"; depends=[genalg MASS]; }; COUNT = derive2 { name="COUNT"; version="1.3.4"; sha256="02f7779fy0d2bql88x5v9csbxljhnyvl8wb8h83xrmwl7kaxsdpy"; depends=[MASS msme sandwich]; }; COUSCOus = derive2 { name="COUSCOus"; version="1.0.0"; sha256="1ykqi72v8v1b3g9qy6h34dvk5fynzf1rl2mby65p08axmaba5798"; depends=[bio3d matrixcalc]; }; - COveR = derive2 { name="COveR"; version="1.0.1"; sha256="1j5fr8pn9gnasbb0dz263c49c62cbqm59xfqjgn7slj7wbiipfq8"; depends=[]; }; CP = derive2 { name="CP"; version="1.6"; sha256="18zblf13riiz3mq3hkvg6vhiwjzpsn6mvgc2p0bqyldy98v4aisd"; depends=[survival]; }; CPBayes = derive2 { name="CPBayes"; version="0.2.0"; sha256="1h4mipvmcjhs1s1dqbibxz2sf73psbwplgc5ki65y5654yqc26pl"; depends=[forestplot MASS]; }; CPE = derive2 { name="CPE"; version="1.4.4"; sha256="09sqp2a0j43jr9ya9piv8575rwd5fdvwmiz4chv75r3mw8p128mn"; depends=[rms survival]; }; CPHshape = derive2 { name="CPHshape"; version="1.0.1"; sha256="05krqcd4spgghp3ihv1zfql6ikd64vkqnrjghjvfki3hi3zi5k7h"; depends=[]; }; - CPMCGLM = derive2 { name="CPMCGLM"; version="1.1"; sha256="1w8yp37vxz2cl0yqdzpyxdfq2scz2h9i4crjzjmjzpzffi45f06s"; depends=[mvtnorm plyr]; }; + CPMCGLM = derive2 { name="CPMCGLM"; version="1.2"; sha256="07hx2ik5zg05w1h6i94398mp54q958phws9ydgp6syjqlp9dpf1p"; depends=[abind mvtnorm plyr]; }; CPsurv = derive2 { name="CPsurv"; version="1.0.0"; sha256="1r68pp3jbcbwgfac132h30qx6ah780aychr49rlncn17xbdalxsh"; depends=[muhaz survival]; }; CR = derive2 { name="CR"; version="1.0"; sha256="0smb2i560dwbxg3mp1svfxmaiw193pd3klwqq0i27czf07k1xfvj"; depends=[]; }; CRAC = derive2 { name="CRAC"; version="1.0"; sha256="0vnqmmmwakx5jnzqp20dng35p7rvmz3ypm2m7bs41m8nhh2wq1xa"; depends=[]; }; CRANsearcher = derive2 { name="CRANsearcher"; version="1.0.0"; sha256="09gw1s28gb0l2cn4w3asl6zlr7wfacxwafbdrayajwckyfkjl5dl"; depends=[curl dplyr DT lubridate miniUI shiny shinyjs stringr]; }; - CREAM = derive2 { name="CREAM"; version="1.0.0"; sha256="1w06vply6i0bdjj8v55jyyhpqr8qv7fsgr86qs2428vqs5g9yw2q"; depends=[]; }; + CREAM = derive2 { name="CREAM"; version="1.1.0"; sha256="09mmfcgh5vfh4hq9vgsr1qsph7qq4w555j1j7zjcq69cfabp0np9"; depends=[]; }; CRF = derive2 { name="CRF"; version="0.3-14"; sha256="0xhjj76730yjlpwbhcpdzqp7s37a9rhf4adk1s7hfb0jm8b76fgh"; depends=[Matrix Rglpk]; }; CRM = derive2 { name="CRM"; version="1.1.1"; sha256="09h6xvqc2h2gxhdhc7592z93cnw16l549pn9i26ml0f0n20hljmf"; depends=[]; }; + CRPClustering = derive2 { name="CRPClustering"; version="1.0"; sha256="1mr6wcfsgl3x9dx3sx1iav1i82r70jn985y7jkmvip0h9xslrk7g"; depends=[MASS mvtnorm png randomcoloR]; }; CRTSize = derive2 { name="CRTSize"; version="1.0"; sha256="1d45zx26bf0zk0piham69gvb8djqf48g6iisbldv0ds3s2hhcsin"; depends=[]; }; CRTgeeDR = derive2 { name="CRTgeeDR"; version="2.0"; sha256="1fzw8618k152b8d4d6wmzp0bfkz2grwp0rqsplwvfdx23nxq437n"; depends=[ggplot2 MASS Matrix]; }; CSclone = derive2 { name="CSclone"; version="1.0"; sha256="0lqsqsgh2sf44fr1r7g179556v294yr1wy7x4320g7adxshrwyh5"; depends=[DNAcopy lpSolve mcclust moments]; }; - CSeqpat = derive2 { name="CSeqpat"; version="0.1.0"; sha256="097r5hhq45wl783qakqs8j2b3315j1bvk9pcpssx6svkn507hh66"; depends=[NLP tm]; }; CTM = derive2 { name="CTM"; version="0.2"; sha256="0h1lpygjq46nwkn4km49bngvxmgrnh3csrfln3yjr9yyzs7d3lz1"; depends=[jiebaR plyr]; }; - CTT = derive2 { name="CTT"; version="2.3"; sha256="1vmyf5y2jf6p4vv667q9rj3fqijxxdha238ccsnylgw8fskhfy6i"; depends=[]; }; + CTT = derive2 { name="CTT"; version="2.3.2"; sha256="1f4ba2qnxx5vlj64sxz4ynby9hv7f32v6ls8yn887z51m33xdxi8"; depends=[]; }; CTTShiny = derive2 { name="CTTShiny"; version="0.1"; sha256="1c9vsiqyig6kfjpy3dfrysc466h4v9530m49aynz65i1njplswyh"; depends=[CTT ltm psych shiny shinyAce]; }; - CUB = derive2 { name="CUB"; version="1.1.1"; sha256="1bix0spq480q79gvraadb8rzxbba6akqki2dxh6whd7h9zb86jpr"; depends=[Formula]; }; - CUFF = derive2 { name="CUFF"; version="1.3"; sha256="1lv3gzh2wmw2dfmyc1fpxng221y1nr9qjxq8fjaxd71khcmzbykg"; depends=[openxlsx xtable]; }; + CUB = derive2 { name="CUB"; version="1.1.2"; sha256="031jkzh6cr8gd2naqv54xs3vlrqmcbl9d2in66kd0dr2i41l3qj7"; depends=[Formula]; }; + CUFF = derive2 { name="CUFF"; version="1.4"; sha256="01lx4ds1rlh7vndv13s11mhhamgsbqnsqjgd44iryfl3jmy3xfz3"; depends=[openxlsx xtable]; }; CUMP = derive2 { name="CUMP"; version="2.0"; sha256="0rdscywmi4sylpjpr8r472iapddizb1mqyrd532cvw6frxins7w0"; depends=[]; }; CUSUMdesign = derive2 { name="CUSUMdesign"; version="1.1.3"; sha256="149d16d5y7zxkzq8gmb5spfrvirv0vyhk2qx0v7vclkr8adz9sva"; depends=[]; }; CVD = derive2 { name="CVD"; version="1.0.2"; sha256="0agb0liwbp4wvmxbyxgfb7471ki1agfb6ssh77kvwbkxqmrc8d96"; depends=[]; }; @@ -528,11 +542,11 @@ in with self; { CVTuningCov = derive2 { name="CVTuningCov"; version="1.0"; sha256="1bwzis82lqwcqp2djy4bnd3vvjr47krlv3pdc5msh12wcs0xhs7n"; depends=[]; }; CVXR = derive2 { name="CVXR"; version="0.94-4"; sha256="0cnipvmrsikfy16sbnvypnhhpn4v8xczrnjnqgc3wkp454znqqhi"; depends=[bit64 ECOSolveR gmp Matrix R_utils R6 Rcpp RcppEigen Rmpfr scs]; }; CVcalibration = derive2 { name="CVcalibration"; version="1.0-1"; sha256="0ca582fnysrldlzxc3pihsph9pvdgygdh7sfzgxvr5fc3z1jbjzb"; depends=[]; }; - CaDENCE = derive2 { name="CaDENCE"; version="1.2.4"; sha256="1v6930wyh12jc2mrr4svg36nppxd1bqvcqardj2bjxzxzg998bq7"; depends=[pso]; }; + CaDENCE = derive2 { name="CaDENCE"; version="1.2.5"; sha256="1z3p5y1l67r470x6wrhnyjvw1ndppcm08fpj99x122j7kn6byff2"; depends=[pso]; }; Cairo = derive2 { name="Cairo"; version="1.5-9"; sha256="1x1q99r3r978rlkkm5gixkv03p0mcr6k7ydcqdmisrwnmrn7p1ia"; depends=[]; }; Calculator_LR_FNs = derive2 { name="Calculator.LR.FNs"; version="1.2"; sha256="07g7ik3xb9ijghkz94qyk87c2d4q942h4d0yicwr1j1xzcv5qzsw"; depends=[]; }; CalibrateSSB = derive2 { name="CalibrateSSB"; version="1.0"; sha256="1r3318rzh29cgq72gdp16z60xkan7hyh1vj4gjg3pzbxy8zawqxx"; depends=[survey]; }; - Canopy = derive2 { name="Canopy"; version="1.2.0"; sha256="10z511vp9nmyf7jaihdx2367ddsnlrfg4rdzlz7rg9b5k9d92pja"; depends=[ape fields pheatmap scatterplot3d]; }; + Canopy = derive2 { name="Canopy"; version="1.3.0"; sha256="0979hpphzhf4v71jx0shh3l8nffmpsn9l6f8ip2wxzcyx571i1wd"; depends=[ape fields pheatmap scatterplot3d]; }; CarletonStats = derive2 { name="CarletonStats"; version="1.3"; sha256="1a8ic2ny2zkqy6xsnzhlc3hybhk200d8jbdbjfy7jav7n757kr0y"; depends=[]; }; CatDyn = derive2 { name="CatDyn"; version="1.1-0"; sha256="0bdixcf1iwbmjd2axi6csrzms25ghdj4r6223qhk2b54wlmbzaiz"; depends=[BB optimx]; }; CatEncoders = derive2 { name="CatEncoders"; version="0.1.1"; sha256="1q9wzq06lac8z9y8b65alsxpb48bw8wqmifd893kknk51xq6r9kl"; depends=[data_table Matrix]; }; @@ -554,14 +568,14 @@ in with self; { ChIPtest = derive2 { name="ChIPtest"; version="1.0"; sha256="1yn5b5s56k2dbhw6damxj18xbaiz180ym7fiq2i3p2gkcgwpddbz"; depends=[]; }; ChainLadder = derive2 { name="ChainLadder"; version="0.2.5"; sha256="0023qbwyrb6vifsllws9jj1hlylmglzfc339d5rg8nhb50i4v6fd"; depends=[actuar cplm ggplot2 lattice MASS Matrix reshape2 statmod systemfit tweedie]; }; ChangepointTesting = derive2 { name="ChangepointTesting"; version="1.0"; sha256="1nb78b1jpp0wpy9ah2fxkh53hlmb2f82b68msbfhancb8zp2lclv"; depends=[]; }; - ChannelAttribution = derive2 { name="ChannelAttribution"; version="1.10"; sha256="1a1fzlp5fc5l357gklya096cwry26hymxrlpqsy1xdr60fd7pfx5"; depends=[Rcpp RcppArmadillo]; }; + ChannelAttribution = derive2 { name="ChannelAttribution"; version="1.12"; sha256="0iz40xbkcjlydxnlm437iiy3pb8viqym6bwimhbjvm2v3dq5p8h5"; depends=[Rcpp RcppArmadillo]; }; ChannelAttributionApp = derive2 { name="ChannelAttributionApp"; version="1.1"; sha256="0qy92ij1riynz7dhri3z85pafww5w9j1gx1bcgr8phlr32a7had7"; depends=[ChannelAttribution data_table ggplot2 shiny]; }; - Chaos01 = derive2 { name="Chaos01"; version="1.0.1"; sha256="061z1cm55d0vxf9ly8hdhqb0qapqkyvhnfg44nnfh43a6a6kv339"; depends=[]; }; + Chaos01 = derive2 { name="Chaos01"; version="1.1.1"; sha256="0ibxibmlyc6wkhqj2achwkwdkniin60y8xh8b80nq6ggmm7w9crw"; depends=[]; }; ChaosGame = derive2 { name="ChaosGame"; version="0.3"; sha256="0nfp2qnhzpncs0yd5rknspin6c4hidqhxdd973ysiivg63wxwz8d"; depends=[colorRamps ggplot2 gridExtra plot3D RColorBrewer rgl sphereplot]; }; CharFun = derive2 { name="CharFun"; version="0.1.0"; sha256="0cqy1na1lh9w3nspy68yylali9y5b64jlgh4fyzas556239dnyk7"; depends=[Bessel]; }; ChargeTransport = derive2 { name="ChargeTransport"; version="1.0.2"; sha256="0mq06ckp3yyj5g1z2sla79fiqdk2nlbclm618frhqcgmq93h0vha"; depends=[]; }; CheckDigit = derive2 { name="CheckDigit"; version="0.1-1"; sha256="0091q9f77a0n701n668zaghi6b2k3n2jlb1y91nghijkv32a7d0j"; depends=[]; }; - ChemoSpec = derive2 { name="ChemoSpec"; version="4.4.85"; sha256="1wb9jvrsydia9lnc0pw55lngiqwa62ff02bfqj1slmr53nw864mp"; depends=[plyr]; }; + ChemoSpec = derive2 { name="ChemoSpec"; version="4.4.97"; sha256="0kdcwv9kncv2r5mabp0mf9bmnajcnxmqavrl2lpn3d2pji6pv1qq"; depends=[plyr]; }; ChemometricsWithR = derive2 { name="ChemometricsWithR"; version="0.1.11"; sha256="00z09bplm5qvd31y7m4b4knsrl0n27j9635m1gdak6lg4db4nxrd"; depends=[devtools kohonen MASS pls]; }; ChoR = derive2 { name="ChoR"; version="0.0-3"; sha256="085p604zbk4l88q4ig2fnfhadxvsssyjl2r48g8s99yx49cvd9sx"; depends=[commonsMath rJava]; }; ChocoLattes = derive2 { name="ChocoLattes"; version="0.1.0"; sha256="0ircdar4fswaf34969gzgn83ia891jvwl29jn4s9a87cc4qagzgr"; depends=[ggplot2 knitr plotly R_utils rmarkdown WriteXLS XML]; }; @@ -590,19 +604,20 @@ in with self; { ClustMMDD = derive2 { name="ClustMMDD"; version="1.0.4"; sha256="0sblf3crpai53dflhyi27yn6mg0xyy9dxhwsk8j57sq5vr50x686"; depends=[Rcpp]; }; ClustOfVar = derive2 { name="ClustOfVar"; version="1.1"; sha256="0grhkab7s58ji4cf7cxh7ahd2dxrj8aqfdf3119b40zxkxbwxcr0"; depends=[PCAmixdata]; }; ClustVarLV = derive2 { name="ClustVarLV"; version="1.5.1"; sha256="11zydj3iq15sg84kny6nklpmh8wj9j9nklkknzfqnaagai8jgsmy"; depends=[Rcpp]; }; + Cluster_OBeu = derive2 { name="Cluster.OBeu"; version="1.2.1"; sha256="18is8aa496qr7afmyqy12s267ans0hhzy0xs8nzr3qp70mwrbbh1"; depends=[car cluster clValid data_tree dendextend jsonlite mclust RCurl reshape reshape2 stringr tibble]; }; ClusterBootstrap = derive2 { name="ClusterBootstrap"; version="0.9.3"; sha256="1znyj39mwdi02xhypvr2fsx2yp45w8br7r8qkn831d6fza5pkcyc"; depends=[]; }; - ClusterR = derive2 { name="ClusterR"; version="1.0.8"; sha256="187n61b5gibsi6wxx5mhx43grzrhqnj5b6pw43m50siw4s6krr0f"; depends=[FD ggplot2 gmp gtools OpenImageR Rcpp RcppArmadillo]; }; + ClusterR = derive2 { name="ClusterR"; version="1.1.0"; sha256="1bin170587cs8awpvjb8g2nvzqklscg8n39lhhayn33wshmbdd8s"; depends=[FD ggplot2 gmp gtools OpenImageR Rcpp RcppArmadillo]; }; ClusterRankTest = derive2 { name="ClusterRankTest"; version="1.0"; sha256="01gzalhibqcdx3a6yc2cm1v77rscva73v5m5m0qkrgqdp9c8ph2a"; depends=[]; }; ClusterStability = derive2 { name="ClusterStability"; version="1.0.3"; sha256="1laa5m3y1rc7jr8q3i9qb3izs7qmadz169w9xm8q3mm3834ngn9b"; depends=[cluster clusterCrit copula Rcpp WeightedCluster]; }; ClusteredMutations = derive2 { name="ClusteredMutations"; version="1.0.1"; sha256="1n31nnvpjh1faw751k8m3ga3wfl0yhdpnszwckqhfzlma1jr8z04"; depends=[seriation]; }; - CoClust = derive2 { name="CoClust"; version="0.3-1"; sha256="00i0dghd35s91kkkxj1ywa5i93752mfa5527ifclw4xxxshppva8"; depends=[copula gtools]; }; + CoClust = derive2 { name="CoClust"; version="0.3-2"; sha256="04xv807785xv9kdspsspx1302ardv8gda06kd590lgawjixai7dh"; depends=[copula gtools]; }; + CoDiNA = derive2 { name="CoDiNA"; version="1.0.0"; sha256="1anc127d4xx1yks5kq2glcv8sijs0sfab9wjs7j9g1aqp97hmk33"; depends=[data_table geometry igraph magrittr plot3D plyr reshape2 visNetwork]; }; CoFRA = derive2 { name="CoFRA"; version="0.1002"; sha256="0ldf84dxaanww3qkf64mz5gv3yv2rjp9m6dy64xckds66vw6x0m3"; depends=[gplots stringr]; }; CoImp = derive2 { name="CoImp"; version="0.3-1"; sha256="0zj152w4cvnbfl144ggs3ixmyywxf9dqhh04jfydmv2a8n6px89n"; depends=[copula gtools locfit nnet]; }; - CoSeg = derive2 { name="CoSeg"; version="0.38"; sha256="1fkaq5zwy8j17jvpv0kzmq40km83qn9s556661ghknzp7w8flih8"; depends=[fGarch kinship2]; }; CodeDepends = derive2 { name="CodeDepends"; version="0.5-3"; sha256="03p82s0abca2jimzqvxdzykfzca7c7fhm5xsjxybcksr4gggr5sc"; depends=[codetools XML]; }; CoinMinD = derive2 { name="CoinMinD"; version="1.1"; sha256="0invnbj5589wbs0k2w5aq9qak7axc3s0g9nw85c48lnl0v95s91i"; depends=[MCMCpack]; }; CollapsABEL = derive2 { name="CollapsABEL"; version="0.10.11"; sha256="0libm1wv34av3vm2vvbqcnxjh4y1rwfi8qzjca8qdz9490vngags"; depends=[biganalytics bigmemory collUtils dplyr ggplot2 haplo_stats R_utils rJava RSQLite stringr]; }; - CollapseLevels = derive2 { name="CollapseLevels"; version="0.1.0"; sha256="0h2grvj5nd8lfwl5fqzp9lrhnl72jmamfyd1bsr37ck3nbbbf3q1"; depends=[dplyr ggplot2 lazyeval magrittr]; }; + CollapseLevels = derive2 { name="CollapseLevels"; version="0.2.0"; sha256="1fn5k83lh0vw5j9vhq0x6ksbkrm25acpslav85wfyknsj9vzmzid"; depends=[dplyr ggplot2 lazyeval magrittr]; }; CollocInfer = derive2 { name="CollocInfer"; version="1.0.4"; sha256="1iwf5g2y7i0j8dc19hdhya4m6g47jj968glnclj7a2yaq2yx37cj"; depends=[deSolve fda MASS Matrix spam]; }; ColorPalette = derive2 { name="ColorPalette"; version="1.0-1"; sha256="1dsj5njikx3qm2lnamqqg4qgwwyr11fwx9s5sdi7dkfx3nmf6dac"; depends=[]; }; ComICS = derive2 { name="ComICS"; version="1.0.3"; sha256="1jfs0ygr88532jjw2ablyn2r3sg3hfsv5yrm4gkdgzakychj3dy2"; depends=[glmnet]; }; @@ -626,8 +641,8 @@ in with self; { CompareCausalNetworks = derive2 { name="CompareCausalNetworks"; version="0.1.9"; sha256="086yacr5fgqzgl1hh0m6qpx59smk66bsxglaic3ynd9n9k1n9p6c"; depends=[data_table expm Matrix]; }; CompareTests = derive2 { name="CompareTests"; version="1.2"; sha256="1z96kh851bpr2szgyjszkpv6m5ma6abz7hrm50fgvfpgxkj7f4yi"; depends=[]; }; CompetingRisk = derive2 { name="CompetingRisk"; version="1.0"; sha256="0lfpqz3a8csgmv8cg4clc1dzsgxvssfr5cyn1mgyxfzssch85drm"; depends=[MASS Matrix reshape2 survival wesanderson]; }; - Compind = derive2 { name="Compind"; version="1.2"; sha256="0xlsfrgh3pk0vfwhp81108fpcbhlddv31w449744rhpwzjbnx04b"; depends=[Benchmarking boot GPArotation Hmisc lpSolve MASS nonparaeff psych]; }; - Compositional = derive2 { name="Compositional"; version="2.7"; sha256="1g304zfpvi2pj4adlc9rhbbik7zgs73bfysm7dy2zpg65ac9jkig"; depends=[doParallel emplik fields foreach MASS mixture Rfast sn]; }; + Compind = derive2 { name="Compind"; version="2.0"; sha256="1qadyl96c9cmk1i763gc055hgv414ha59418lqk183kwl5sgbqy5"; depends=[Benchmarking boot GPArotation Hmisc lpSolve MASS nonparaeff np psych smaa spdep]; }; + Compositional = derive2 { name="Compositional"; version="2.8"; sha256="13658sa6x058ldvhawvwypi7pzija633bm3q6bb0pw7alirdabd1"; depends=[doParallel emplik fields foreach MASS mixture Rfast sn]; }; Compounding = derive2 { name="Compounding"; version="1.0.2"; sha256="1xlb3ylwjv70850agir0mx79kcvs43h0n1sm22zcny3509s2r7lf"; depends=[hypergeo]; }; ConConPiWiFun = derive2 { name="ConConPiWiFun"; version="0.4.6"; sha256="1kkc4xp5b6q54b76wk4ga28wl668psbpyivl6bnh3xm21276yx5k"; depends=[Rcpp]; }; ConR = derive2 { name="ConR"; version="1.2.1"; sha256="0k6761x5dfibbbzfzmkc73ahfmw54d5rpj0rj32232qdlk48hqk5"; depends=[fields geosphere maptools raster rgdal rgeos sp spatstat spatstat_utils]; }; @@ -641,9 +656,10 @@ in with self; { ConjointChecks = derive2 { name="ConjointChecks"; version="0.0.9"; sha256="097mhiz8zjmmkiiapr3zfx7v35xirg57nqp1swd72dixaa23nhr1"; depends=[]; }; ConnMatTools = derive2 { name="ConnMatTools"; version="0.3.3"; sha256="0zsn3al3di0fd9hkqljpqqy4zbmh97xr6cdi4fzv80ax81fjfqyk"; depends=[]; }; ConsRank = derive2 { name="ConsRank"; version="2.0.1"; sha256="18f1gqa46f8jrcf2zj4njyy78cl0scjs9k8s9mvg0f9dpr44xnan"; depends=[gtools proxy rgl]; }; - ContaminatedMixt = derive2 { name="ContaminatedMixt"; version="1.2"; sha256="19h2pdzfr7bqsnjzwalwq1hanp52vwkkm6f55q3rsfcf8wl392rn"; depends=[caret mclust mixture mnormt mvtnorm]; }; + ContaminatedMixt = derive2 { name="ContaminatedMixt"; version="1.3.2"; sha256="0761wfjxh26kf4q1qcfzfaj52553yiw1ny6l84r3wzzx4hv893qy"; depends=[caret mclust mixture mnormt mvtnorm]; }; ContourFunctions = derive2 { name="ContourFunctions"; version="0.1.0"; sha256="1hlff3wx8r1wpkhrz0n27wjnzy6z2q8s9smyb906gwwa9xga7njy"; depends=[]; }; ConvCalendar = derive2 { name="ConvCalendar"; version="1.2"; sha256="0yq9a42gw3pxxwvpbj6zz5a5zl7g5vkswq3mjjv5r28zwa3v05vc"; depends=[]; }; + ConvergenceClubs = derive2 { name="ConvergenceClubs"; version="1.0.0"; sha256="0ndb7k2lfv6014a7c61a2mmcsywpa478lk6fh7d0jkv55hmnzvs9"; depends=[lmtest sandwich]; }; ConvergenceConcepts = derive2 { name="ConvergenceConcepts"; version="1.2.1"; sha256="0kl67ds6369mxl2i93h43r00ji12qkg0k9m4jhcxsb0ydd8rfqgp"; depends=[lattice tkrplot]; }; CoordinateCleaner = derive2 { name="CoordinateCleaner"; version="1.0-2"; sha256="18l25hllw4f8pgcj5vrqinjqs1qns74bnw7cnq24p9pcdp218zkg"; depends=[geosphere ggplot2 raster rgeos rnaturalearth sp]; }; Copula_Markov = derive2 { name="Copula.Markov"; version="1.1"; sha256="0pgzrgd9bzf2qh9b7h0y4mmszlxk1wxdwlid3xh7rk7pif3mw3qd"; depends=[]; }; @@ -657,8 +673,9 @@ in with self; { CorporaCoCo = derive2 { name="CorporaCoCo"; version="1.1-0"; sha256="1s3wlcy6mnw9riivw5lc4gd6bjbsd77m15ipr95g46isdcrli8zb"; depends=[data_table RColorBrewer rlist]; }; CorrBin = derive2 { name="CorrBin"; version="1.5"; sha256="1kg8kms76z127j2vmf7v162n0sh2jqylw4i7c35x5sig4q22m9gy"; depends=[boot combinat dirmult geepack mvtnorm]; }; CorrMixed = derive2 { name="CorrMixed"; version="0.1-13"; sha256="02zg5kmv5qxnasnz872r3z7x7dmdcniq1x5xyfnnb3niwkdjgxzx"; depends=[nlme psych]; }; - CorrToolBox = derive2 { name="CorrToolBox"; version="1.4"; sha256="15x9l4swgrbry10k5iws75xs4bbh7mpcg4f4fx9yd9z92yq72ly2"; depends=[BinNonNor BinOrdNonNor GenOrd moments mvtnorm psych]; }; + CorrToolBox = derive2 { name="CorrToolBox"; version="1.5"; sha256="1ggrm144zmi54cqb5l2nif7dn1zb1kn31i1xhxc4jwr7fn380iyi"; depends=[BinNonNor BinOrdNonNor GenOrd moments mvtnorm psych]; }; CorrectOverloadedPeaks = derive2 { name="CorrectOverloadedPeaks"; version="1.2.14"; sha256="1if4qb1d6mg3435pk3znln8id8fj12n3j9sjv4zn104v2fr90mhr"; depends=[caTools digest xcms XML]; }; + CorrectedFDR = derive2 { name="CorrectedFDR"; version="1.0"; sha256="15047cfjniljzhznkbzq3hyq221y9k7fa04f69zm0k0sxr627gxg"; depends=[]; }; Correlplot = derive2 { name="Correlplot"; version="1.0-2"; sha256="0prxnbi7ga5d23i0i4qpynfb3zrsgjxam47km6nsj1prakdkrq7w"; depends=[calibrate xtable]; }; CosW = derive2 { name="CosW"; version="0.1"; sha256="12l4w8b5jnr8773hxk7khrdn705x6bdbw7s8z8w95bfbbi12dj6v"; depends=[fdrtool pracma]; }; CosmoPhotoz = derive2 { name="CosmoPhotoz"; version="0.1"; sha256="04girid6wvgyrk8ha81mdqjx2mmzifz57l1hzcgrdnzmjmm3vlmp"; depends=[arm COUNT ggplot2 ggthemes gridExtra mvtnorm pcaPP shiny]; }; @@ -667,7 +684,7 @@ in with self; { CountsEPPM = derive2 { name="CountsEPPM"; version="2.1"; sha256="1w1l4kbk8c2prq7f38maz0fc44j9za6cmj0vydmcgscb9s6f3mg7"; depends=[expm Formula numDeriv]; }; CovSel = derive2 { name="CovSel"; version="1.2.1"; sha256="02fsiykbg96ynqw25vfyrams7fs39xjmfhvb23zjbqb7ql6d0xdk"; depends=[dr MASS np]; }; CovSelHigh = derive2 { name="CovSelHigh"; version="1.1.1"; sha256="0dvvpkqml2k00gicpgp475z1rjspq3s37ys1mam29k54qlshhny6"; depends=[bartMachine bindata bnlearn doParallel doRNG foreach glmnet MASS Matching randomForest tmle xtable]; }; - CovTools = derive2 { name="CovTools"; version="0.2.1"; sha256="0f5d68hwd86bsvyrv5qxvppb7d0pvh6kj9bmbhdid7wh8v0dxfx9"; depends=[doParallel expm foreach geigen Matrix mvtnorm pracma Rcpp RcppArmadillo shapes]; }; + CovTools = derive2 { name="CovTools"; version="0.3.0"; sha256="0p5mfrdp4p5fz9ld0rqrd2kj73hi1dzx0iwl4rihhgfgdplzknhf"; depends=[doParallel expm foreach geigen Matrix mvtnorm pracma Rcpp RcppArmadillo Rdpack shapes]; }; CoxBoost = derive2 { name="CoxBoost"; version="1.4"; sha256="1bxkanc8zr4g3abn4ds5wqibv65flvm4y648fs9s0l4vc9vmyshg"; depends=[Matrix prodlim survival]; }; CoxPlus = derive2 { name="CoxPlus"; version="1.1.1"; sha256="038wsz206bgc0pnzx403b5ihcwhxpkrpxmwvrvqcxf8333pb62l5"; depends=[Rcpp RcppArmadillo]; }; CoxRidge = derive2 { name="CoxRidge"; version="0.9.2"; sha256="0p65mg4hzdgks03k1lj90yj6qbk50s94rwvcwzkb5xxxwrijd10r"; depends=[survival]; }; @@ -676,7 +693,7 @@ in with self; { CpGassoc = derive2 { name="CpGassoc"; version="2.60"; sha256="1zx18x8pxjl2ajnj7a7lb8383m75ysg17f4mzz0vkgl5mnf617ny"; depends=[nlme]; }; Cprob = derive2 { name="Cprob"; version="1.4"; sha256="1kjw5hhb3fy12xlyg01i8ynl78gx0r57kvmgafbqix1s3pg2hyw6"; depends=[geepack lattice lgtdl prodlim tpr]; }; CreditMetrics = derive2 { name="CreditMetrics"; version="0.0-2"; sha256="16g3xw8r6axqwqv2f0bbqmwicgyx7nwzff59dz967iqna1wh3spi"; depends=[]; }; - CreditRisk = derive2 { name="CreditRisk"; version="0.1.1"; sha256="0fd6jyd3slr7p14d1gh49fpknk4smdnzsvz29xwayh3zbizr686a"; depends=[fOptions]; }; + CreditRisk = derive2 { name="CreditRisk"; version="0.1.3"; sha256="09ks8xlsrbp3an1drcwmmd6df4fsfz61z21ma2p62a1pk0bnc86c"; depends=[fOptions]; }; CrossClustering = derive2 { name="CrossClustering"; version="3.0"; sha256="0l9cdniqf63x4pfkf6y7c2qh056jwadqw45nz9jk78wamqq8hyqv"; depends=[cluster]; }; CrossScreening = derive2 { name="CrossScreening"; version="0.1.1"; sha256="1gig80r8p611ysn35ajx7xdjj5wnkcf1vspcf0i06dmh75xpm3w9"; depends=[plyr tables]; }; CrossVA = derive2 { name="CrossVA"; version="0.9.1"; sha256="13skbazs1mh5am70qlwxhvxgfx4gwlzzq6zy3vdzaa3zbykkxlvw"; depends=[lubridate]; }; @@ -684,19 +701,21 @@ in with self; { Crossover = derive2 { name="Crossover"; version="0.1-17"; sha256="168j8fl6h7x1pia5f5c18yrf0y1lvznib8clq1mv0imb7cjzkkhi"; depends=[CommonJavaJars crossdes digest ggplot2 JavaGD MASS Matrix multcomp Rcpp RcppArmadillo rJava xtable]; }; CryptRndTest = derive2 { name="CryptRndTest"; version="1.2.2"; sha256="1cg0agwqp1f7pgxdf9wilwparklyfsv900r47fpihnqw3ycvbdai"; depends=[gmp kSamples LambertW MissMech Rmpfr sfsmisc tseries]; }; CrypticIBDcheck = derive2 { name="CrypticIBDcheck"; version="0.3-1"; sha256="1lrpwgvsif1wnp19agh8fs3nhlb7prr3hhqg28fi4ikdd1l2j3r4"; depends=[car chopsticks ellipse rJPSGCS]; }; + CsChange = derive2 { name="CsChange"; version="0.1.3"; sha256="08ss1dzwirmnlgw440g3k3vnrl1imhmd2gljnid8z2dzj5450alr"; depends=[boot Hmisc rms survival]; }; CuCubes = derive2 { name="CuCubes"; version="0.1.0"; sha256="1cpazar85rp8xfjvy0vxivr61grzvxz7a9mirxvhynln964by6ns"; depends=[]; }; - Cubist = derive2 { name="Cubist"; version="0.2.0"; sha256="1cf0x5yg6jbjqmnzf9cg5jd50iwvz9l8f232cms321pwnrr1550z"; depends=[lattice reshape2]; }; + Cubist = derive2 { name="Cubist"; version="0.2.1"; sha256="18w82l44b6jsmz19l34dmaqb22qvjcwhs4cddzhs6pzicvqw645k"; depends=[lattice reshape2]; }; Cyclops = derive2 { name="Cyclops"; version="1.3.0"; sha256="0sznzzz21qn1cxxfa3wiwvfza7lykzzf0xyqvawha9vzm8qzgqnq"; depends=[BH bit ff ffbase Matrix Rcpp RcppEigen RcppParallel survival]; }; CytobankAPI = derive2 { name="CytobankAPI"; version="1.1.0"; sha256="1014r17krw74drykdlw24pgqylidp8yxa00zhf340ilcxfpacxyi"; depends=[curl httr jsonlite]; }; CytobankAPIstats = derive2 { name="CytobankAPIstats"; version="1.0"; sha256="0hr74igy43d5ybzlgqpvx9ingw6h83w502b6k55cp6zqcv5rl8d5"; depends=[CytobankAPI]; }; + CytobankBridgeR = derive2 { name="CytobankBridgeR"; version="1.0.0"; sha256="0m8gxbm3p9gvdszymqx10n5rzb406r4f70a0in798c56mp2rcsl4"; depends=[CytobankAPI]; }; D2C = derive2 { name="D2C"; version="1.2.1"; sha256="0qhq27978id0plyz9mgdi0r1sr3ixnvqm8w6hp5c2wjd1yhhh12s"; depends=[corpcor foreach gRbase lazy MASS randomForest RBGL Rgraphviz]; }; D3GB = derive2 { name="D3GB"; version="1.1"; sha256="1r4hxx2qdws7c7hsnswzfh6az8mn720sk8nygilljl2ghnwpq7pa"; depends=[DBI RSQLite]; }; - D3M = derive2 { name="D3M"; version="0.41.1"; sha256="1qr50xq5zccb16a1rgzfbb9bz8bbnxxb522nb8ga159nmb4cwjmp"; depends=[beanplot Rcpp]; }; D3partitionR = derive2 { name="D3partitionR"; version="0.5.0"; sha256="10067rdgbpjzgw2wiq75kdd0gd7bl41hp16sxc0k2p72ybqfpw03"; depends=[data_table functional htmlwidgets magrittr RColorBrewer titanic]; }; DAAG = derive2 { name="DAAG"; version="1.22"; sha256="16xp4qk09v9jwm4cs7b4mpn0kgl1va9rw86viwcjc54vjc32953f"; depends=[lattice latticeExtra]; }; DAAGbio = derive2 { name="DAAGbio"; version="0.63-3"; sha256="0n82d9nsvpl6cwp95by8ff9fmdafs2fdi603dlik5890adaw42x4"; depends=[limma]; }; DAAGxtras = derive2 { name="DAAGxtras"; version="0.8-4"; sha256="18lg13mbyharidj5j7ncx8s7d72v2hcnqr00vilhf3djk2mjq7xn"; depends=[]; }; DAC = derive2 { name="DAC"; version="0.1.0"; sha256="0x27asjn1y8bxgc35ic4jpara4f7vn8w61fpg4glkjy5nbh5ss0p"; depends=[fGarch flexmix]; }; + DACF = derive2 { name="DACF"; version="1.0.0"; sha256="0hv7c9lk6ivj4iz953yn11iy5p611q4si4ghn9d5a9i229s5hig8"; depends=[]; }; DAGGER = derive2 { name="DAGGER"; version="1.4"; sha256="0b2hzv001xhch7pqgb53lfpdcjwg5lj33i6pb884l1kx92svjfr7"; depends=[Matrix quadprog Rglpk]; }; DAISIE = derive2 { name="DAISIE"; version="1.4"; sha256="16653wwz20lhf3bpzflpj5d1h7j3cqyfaqk5gn24aifga2jc0wbb"; depends=[DDD deSolve Matrix subplex tensor]; }; DAKS = derive2 { name="DAKS"; version="2.1-3"; sha256="0vmpwxvksnmyq40faimbgpj0y3zbk519986n38ipwdfzllcg0zs4"; depends=[relations sets]; }; @@ -707,7 +726,7 @@ in with self; { DBEST = derive2 { name="DBEST"; version="1.8"; sha256="1a598g02hpfgv572gchllqkppynnsp4lx764jg0g66w3b66k0kdy"; depends=[zoo]; }; DBGSA = derive2 { name="DBGSA"; version="1.2"; sha256="04zqh9y3nqcdzs5jn8aaq5idy9zl450ikvl788xs860wlg692qv2"; depends=[fdrtool]; }; DBI = derive2 { name="DBI"; version="0.7"; sha256="04fyrxdpqcygg5wviy637y6lgk64xqjjq31lvv4hwqj5kbaxamr5"; depends=[]; }; - DBItest = derive2 { name="DBItest"; version="1.5"; sha256="1mhygy6wdw22r43jcisyxc852q1lbzx4xi387csf2zqgl86xldw4"; depends=[blob DBI desc hms R6 testthat withr]; }; + DBItest = derive2 { name="DBItest"; version="1.5-2"; sha256="05wizjm2b97fsdha2i391h38xb0zrkhnd036qvdcm0r5l0y56sm8"; depends=[blob DBI desc hms R6 testthat withr]; }; DBKGrad = derive2 { name="DBKGrad"; version="1.6"; sha256="0207zx0v1x3zhfbs0h1ssxc1b683k111f90k8ybhknb147104knr"; depends=[lattice minpack_lm SDD TSA]; }; DCA = derive2 { name="DCA"; version="2.0"; sha256="1acy33vyf814kr0aj6kdvi9f1qzgynwwzv57ll01gd0iqq36374f"; depends=[coin elasticnet GPArotation locfdr modeest mvtnorm PMA]; }; DCD = derive2 { name="DCD"; version="0.1.0"; sha256="0p6vk8fdvpcvb1bb5fwy3h1v8y3djlvcm5jl5lnx30ngqj6d7rcj"; depends=[data_table doParallel foreach ggplot2 igraph lattice lsa Matrix plyr qlcMatrix Rdpack ROCR WGCNA]; }; @@ -719,7 +738,7 @@ in with self; { DCchoice = derive2 { name="DCchoice"; version="0.0.15"; sha256="1qdqn45ipq0806r25ri4aygzq48k8j5k8rlhi1cafym421yq6bfg"; depends=[Formula interval MASS]; }; DCluster = derive2 { name="DCluster"; version="0.2-7"; sha256="008nyry64s5g80narcc58273v0jhqzfgwynka6mh7jgi7qsqnxjd"; depends=[boot MASS spdep]; }; DClusterm = derive2 { name="DClusterm"; version="0.1"; sha256="0xkl4677vqy4sdkm0fczscqszjxk1kfmlbzdgm88shcnjzjg71d8"; depends=[DCluster gridExtra latticeExtra lme4 pscl RColorBrewer sp spacetime xts]; }; - DDD = derive2 { name="DDD"; version="3.5"; sha256="1kchgp6h0gmmiszi4cxrzixhfs4qvii33c71daddxbgaqdgw7c6z"; depends=[ade4 ape deSolve expoRkit Matrix phytools pracma SparseM subplex]; }; + DDD = derive2 { name="DDD"; version="3.6"; sha256="0lkij10z6bviay2dg6k5pmb9ddg4smcz96fkww0qx8h636zd2xlq"; depends=[ade4 ape deSolve expoRkit Matrix phytools pracma SparseM subplex]; }; DDHFm = derive2 { name="DDHFm"; version="1.1.2"; sha256="0lgh6kcfas06p2yy7zy21r05k5521xbj5af3wwwssp5li1cia35g"; depends=[lokern wavethresh]; }; DDIwR = derive2 { name="DDIwR"; version="0.2-0"; sha256="0dqbldl5c6b8i5q3yk0hwd12lp8z9j4ilnmsqrkj69fv7mys9q3k"; depends=[foreign XML]; }; DDM = derive2 { name="DDM"; version="1.0-0"; sha256="19g06qk3lzasj294x9wfij729mlq6ryvjqkn3rgl5xp1w0gx9wi2"; depends=[]; }; @@ -729,7 +748,6 @@ in with self; { DEMEtics = derive2 { name="DEMEtics"; version="0.8-7"; sha256="1s59qim60d4gp5rxjacdbmxdbpdm7cy9samn088w8fs0q232vjjx"; depends=[]; }; DEMOVA = derive2 { name="DEMOVA"; version="1.0"; sha256="09dqhhhihphhdnplmhdq4q5zwc0qvqhirdrxa9x6fr43vwa5zfp4"; depends=[leaps]; }; DES = derive2 { name="DES"; version="1.0.0"; sha256="16p38i8ykwc8gjw6c9dhdwjjpa1b17n9wqhz3rhkbzjh978pky31"; depends=[]; }; - DESP = derive2 { name="DESP"; version="0.2-2"; sha256="1s5x6x36ra83izcyrgdzc26a02cbbgy3xxn32sl30z6srys1j3j3"; depends=[graph MASS Matrix RBGL SparseM]; }; DESnowball = derive2 { name="DESnowball"; version="1.0"; sha256="012kdnxmzap6afc3ffkcvk1mazlkp286av6g9fwz2wcbf5mh9n1m"; depends=[clue cluster combinat MASS]; }; DEoptim = derive2 { name="DEoptim"; version="2.2-4"; sha256="10nlsvms5pf0wmn4z1lj6vnmpwr10q8nhdy5xy9rn7hd1627fm0a"; depends=[]; }; DEoptimR = derive2 { name="DEoptimR"; version="1.0-8"; sha256="1vz546hyjyhly70z62h5n3mn62b8llhhmim8ffp9y6jnnb0i2sc4"; depends=[]; }; @@ -746,7 +764,7 @@ in with self; { DJL = derive2 { name="DJL"; version="2.6"; sha256="1vvfh9hpanac2g22k4hqy3y7j3mn34mvasw0rx3y4vjbv3h05yw6"; depends=[car lpSolveAPI]; }; DLASSO = derive2 { name="DLASSO"; version="2.0.2"; sha256="0xdygf6h89d9z4kqb46iqfxgdzq9dmkrxf9ypw78l4d8n9xx2gaa"; depends=[MASS]; }; DLMtool = derive2 { name="DLMtool"; version="5.0.2"; sha256="0fz8qy3328wmxqg5s13bl2qr4f54zc2bk4amb9kz490vf00by0iw"; depends=[abind coda devtools ggplot2 ggrepel gridExtra knitr LBSPR MASS mvtnorm openxlsx r4ss Rcpp RcppArmadillo readxl rmarkdown snowfall]; }; - DMMF = derive2 { name="DMMF"; version="0.3.2.0"; sha256="17v7ksmknbgh7h9k2l6mgkykg0rq352nlw585yhfck0bvvb5vdb3"; depends=[raster rgdal sp]; }; + DMMF = derive2 { name="DMMF"; version="0.4.0.1"; sha256="0fypj0a0kjzfghazs55mxkig9n3ngjmbi3xmdxkpa35jbn71bfdd"; depends=[raster rgdal sp]; }; DMR = derive2 { name="DMR"; version="2.0"; sha256="1kal3bvhwqs00b6p6kl0ja35pcz9v9y569148qfhy94m319fcpzm"; depends=[magic]; }; DMRMark = derive2 { name="DMRMark"; version="1.1.1"; sha256="15wr6j0v9kvbv8y6flkp4svfqy059ziv89nxv91vp0pjmavhpdlz"; depends=[ellipse MCMCpack mvtnorm]; }; DMRnet = derive2 { name="DMRnet"; version="0.1.0"; sha256="0p5iyj6zqrv1hsfdq7bp96ly8dkf2ky6gzilrha336lhm35ym7sr"; depends=[glmnet grpreg]; }; @@ -756,16 +774,16 @@ in with self; { DNAtools = derive2 { name="DNAtools"; version="0.1-22"; sha256="1kkqbzwbivd78lpphsn9xqdxqc46ng6f86nqns18gq0s2g8gvys1"; depends=[multicool Rcpp Rsolnp]; }; DNLC = derive2 { name="DNLC"; version="1.0.0"; sha256="05410xgpfjsydjmnzry454qcjpws9vhh252q2xq7l0scdj87ly00"; depends=[caTools fdrtool GOstats igraph locfdr mvtnorm spdep]; }; DNMF = derive2 { name="DNMF"; version="1.3"; sha256="09yp6x6vd44ahklcag96fpjgyphyn45rkqkbwr1n36a2d8vxk9nc"; depends=[doParallel foreach gplots Matrix]; }; - DOBAD = derive2 { name="DOBAD"; version="1.0.5"; sha256="0nvjs4vsbl1db4g0yyrqyllawhvrzv1lgs6gmn49iqvajxyrpnvi"; depends=[lattice numDeriv]; }; + DNetFinder = derive2 { name="DNetFinder"; version="1.0"; sha256="0q56c2389qaq3wsqpj8s95ncm0xmbl1slr0jmpixb48hhgk0l0ji"; depends=[flare]; }; + DOBAD = derive2 { name="DOBAD"; version="1.0.6"; sha256="0ifrrfm4yp1416z58qgnak042rgj1xvqby2vvzgrv19z6b3250p3"; depends=[lattice Matrix numDeriv]; }; DODR = derive2 { name="DODR"; version="0.99.2"; sha256="16ia9j8vab8n2i6a17wz8nfvkfgj2gsyhxvwgxvjg2cz99hsbhdj"; depends=[Matrix npsm Rfit]; }; DOT = derive2 { name="DOT"; version="0.1"; sha256="0qh5n57cp9c2n5yn59q4wggz82943pwfanp3kx869aba2x3sj30i"; depends=[V8]; }; DOvalidation = derive2 { name="DOvalidation"; version="1.1.0"; sha256="1mzws3w7djpxnfqxjcqwgia7p17kb0qlnzj6qcfg2m1vamb1cn2z"; depends=[]; }; DPBBM = derive2 { name="DPBBM"; version="0.2.5"; sha256="1qypxrcm3sb727lqb09ssjf3hblixqayw3qsyql01imrxwm609i2"; depends=[CEoptim gplots tmvtnorm VGAM]; }; - DPP = derive2 { name="DPP"; version="0.1.1"; sha256="0mpamnypdhg4fggz29k6vh5kksg6n8sv6v5jjka7901lhxwydlvn"; depends=[coda Rcpp]; }; - DPpackage = derive2 { name="DPpackage"; version="1.1-7"; sha256="027zwznkqn2ny21dqvmk1fclzxnvsf8lpn1ks0rbigc58df4cvx2"; depends=[MASS nlme survival]; }; + DPpackage = derive2 { name="DPpackage"; version="1.1-7.4"; sha256="0lfw55kbjwr1dqkd98p6488p6c0nh5pkfkc9wpds8wsqm38siad6"; depends=[MASS nlme survival]; }; DREGAR = derive2 { name="DREGAR"; version="0.1.3.0"; sha256="15cplshs85r0z659mc7xmj5db7vc95wxs01c34isc22p8z0a287i"; depends=[msgps]; }; DRIP = derive2 { name="DRIP"; version="1.1"; sha256="050xfq30fp9m03ig938bci2haiglj6jj4k327fpz7r2y78cgcnn4"; depends=[caTools readbitmap]; }; - DRR = derive2 { name="DRR"; version="0.0.2"; sha256="1scfwp6ry6apxzqjclsmn2frxp9qfw6zxsxn5w0j0q3sz42hz1h2"; depends=[CVST kernlab Matrix]; }; + DRR = derive2 { name="DRR"; version="0.0.3"; sha256="1yd1fvllfkcrwg9v322n4wkk4q4q84nvy58y4vac9pdr3yf3i4vl"; depends=[CVST kernlab Matrix]; }; DRaWR = derive2 { name="DRaWR"; version="1.0.1"; sha256="1pfdczwzd236c64yw94bgbk0hbl4dhlgjfjwkljmqgqrzsddvgqh"; depends=[Matrix ROCR]; }; DSAIDE = derive2 { name="DSAIDE"; version="0.6.0"; sha256="0jg5shgq1f9k0fcpzkpynd87xfcj8ky09xsz8n8yfvy4fw8d77kl"; depends=[adaptivetau deSolve knitr shiny]; }; DSBayes = derive2 { name="DSBayes"; version="1.1"; sha256="0iv4l11dww45qg8x6xcf82f9rcz8bcb9w1mj7c7ha9glv5sfb25v"; depends=[BB]; }; @@ -774,7 +792,7 @@ in with self; { DSsim = derive2 { name="DSsim"; version="1.1.2"; sha256="1n46r7nn2wl8xnc22wf91mcz745yzx83g8nk5mmj429j3i0sfd77"; depends=[fields mgcv mrds rgeos shapefiles sp splancs]; }; DStree = derive2 { name="DStree"; version="1.0"; sha256="14wba25ylmsyrndh007kl377dv4r34wr1555yxl6kyxrs4yg3jir"; depends=[Ecdat pec Rcpp rpart rpart_plot survival]; }; DSviaDRM = derive2 { name="DSviaDRM"; version="1.0"; sha256="1hj2pgnldrpgapwwz1kf4k6mvyzwdvb1i6czd7sbimsx5hafwps8"; depends=[igraph ppcor]; }; - DT = derive2 { name="DT"; version="0.2"; sha256="1g86p0jcjqi2ph5rhm45jkzibsa6yfcj8n5cg3giy90sqgjzkdx1"; depends=[htmltools htmlwidgets magrittr]; }; + DT = derive2 { name="DT"; version="0.4"; sha256="06gsqz7p2fv6hc3fm3759gaa50krcfrqrmy7qbxyam6a36w9daix"; depends=[crosstalk htmltools htmlwidgets magrittr]; }; DTComPair = derive2 { name="DTComPair"; version="1.0.3"; sha256="1af2293ckkpz0gjcibgzzvz37852cav4wa4girpc87yn3p4ajlri"; depends=[gee PropCIs]; }; DTDA = derive2 { name="DTDA"; version="2.1-1"; sha256="0hi2qjcwd6zrzx87mdn1kns5f2h6jh7sz9jpgbi0p0i80xg8jnn3"; depends=[]; }; DTK = derive2 { name="DTK"; version="3.5"; sha256="0nxcvx25by2nfi47samzpfrd65qpgvcgd5hnq9psx83gv502g55l"; depends=[]; }; @@ -783,6 +801,7 @@ in with self; { DTRlearn = derive2 { name="DTRlearn"; version="1.2"; sha256="1dakwlafs27nkjsiknnwxnb2hgc2xdpi5mb6dmzpjig7hg2f8d3f"; depends=[ggplot2 glmnet kernlab MASS]; }; DTRreg = derive2 { name="DTRreg"; version="1.3"; sha256="1144kcqblyrpdqyj9as6y47iq3x99bf76hdw6j43cmgcs11gapc3"; depends=[]; }; DVHmetrics = derive2 { name="DVHmetrics"; version="0.3.7"; sha256="1syxw49pzh36nfq0zfr83cwpac86fnj0b7nlqiin4jb00h8vrf6i"; depends=[ggplot2 KernSmooth markdown reshape2 shiny]; }; + DWDLargeR = derive2 { name="DWDLargeR"; version="0.1-0"; sha256="1bxdvgj38xv2xj98njpyhy12b54nccwnc3v92kkpd3i7nwbw48dy"; depends=[Matrix SparseM]; }; DWLasso = derive2 { name="DWLasso"; version="1.1"; sha256="1i8j8wjfvg69ldr8ahz1zv3m2wgxd701iph94ad22zs9qwqfg16z"; depends=[glmnet hglasso Matrix]; }; DWreg = derive2 { name="DWreg"; version="2.0"; sha256="0bgahzgcxz86n0ady97l48zyahv3p2iyc2ivbij1xrfx3wcx3b5n"; depends=[DiscreteWeibull Ecdat maxLik survival]; }; DYM = derive2 { name="DYM"; version="0.2"; sha256="1rk0xs224xi68f0mrygny2rklggl4grk866q7y9xck38bwy7aw94"; depends=[]; }; @@ -797,13 +816,14 @@ in with self; { DataClean = derive2 { name="DataClean"; version="1.0"; sha256="0wkafjyp6c2mx7g1bpz2pbxyl5nm2wba2hly8miizv0fdc762za5"; depends=[xlsx XML]; }; DataCombine = derive2 { name="DataCombine"; version="0.2.21"; sha256="0iwb4726bk0cjhay694dp43b1553yyk9lpxbncs85kz229b26arm"; depends=[data_table dplyr]; }; DataEntry = derive2 { name="DataEntry"; version="0.9-3"; sha256="0gfsg7wfwy88x7y1dwpgwi6fkizjnhrzj0a5ij70y4a4sjmyiy55"; depends=[digest gWidgets2 gWidgets2RGtk2 RGtk2]; }; - DataExplorer = derive2 { name="DataExplorer"; version="0.4.0"; sha256="0yxx20wzdnsz924q7mh9sbbbby04vv5rybvyqbk2s78a8lqv7abw"; depends=[data_table ggplot2 gridExtra networkD3 reshape2 rmarkdown scales]; }; + DataExplorer = derive2 { name="DataExplorer"; version="0.5.0"; sha256="1vsbnm720p786f627sfx447p8q45nwd2gdm7b9hf4d3rsmrcwqsf"; depends=[data_table ggplot2 gridExtra networkD3 reshape2 rmarkdown scales]; }; DataGraph = derive2 { name="DataGraph"; version="1.0.1"; sha256="0rvysvkcs926jzhp7iz9d5np0pa31y825ajn9yyzhbdfk5dg2wry"; depends=[Rcpp]; }; DataLoader = derive2 { name="DataLoader"; version="1.3"; sha256="18mih6mb95v5xjvmqwby2mma74fcxwyqdm5w8j3bhi4iwgfn6d7v"; depends=[plyr rChoiceDialogs readxl xlsx]; }; - DatabionicSwarm = derive2 { name="DatabionicSwarm"; version="0.9.8"; sha256="1xvl3xppp16d8khazi9jnq9hfxjb7rj5vp7pgrg19lx1hnl0wack"; depends=[deldir GeneralizedUmatrix Rcpp RcppArmadillo]; }; + DataVisualizations = derive2 { name="DataVisualizations"; version="0.9.2"; sha256="0np64vbk878i52gbh7gs1pklqy60zpa7n44ir7mxqyw3v50bvp8s"; depends=[AdaptGauss ggplot2 magrittr Rcpp RcppArmadillo]; }; + DatabionicSwarm = derive2 { name="DatabionicSwarm"; version="1.0.0"; sha256="1xnqc0b3w8sqafbwmwd6pdm78p3ip1d3nfkp6jb081by49qjxiw6"; depends=[deldir GeneralizedUmatrix Rcpp RcppArmadillo]; }; Datasmith = derive2 { name="Datasmith"; version="1.0-1"; sha256="1ba23b8a931pvml2dzw0zkm40akcl2lb6rps6bffrl7lvxiy35y1"; depends=[igraph lbfgs MASS Matrix nloptr truncnorm vegan]; }; Davies = derive2 { name="Davies"; version="1.1-9"; sha256="19n2szki2dc8z01zh5a7bq4scgisnpd2qqbiimgrswjrykgh2fpm"; depends=[]; }; - DeLorean = derive2 { name="DeLorean"; version="1.2.5"; sha256="17qrgij2npdgsdifsa2bvcs99p28why3wbdz5a8dkhyj4plj14kk"; depends=[broom coda dplyr fastICA functional ggplot2 kernlab MASS memoise Rcpp reshape2 rstan seriation stringr]; }; + DeLorean = derive2 { name="DeLorean"; version="1.3.0"; sha256="0bsmrpraaks4nsjdbhn1npvybb29pxiby8sdimv36nqpb1fyjgpk"; depends=[broom coda dplyr fastICA functional ggplot2 kernlab MASS memoise Rcpp reshape2 rstan seriation stringr]; }; DecorateR = derive2 { name="DecorateR"; version="0.1.1"; sha256="1dvyadlksqv8ns043yh91f6kw162k6r0zwn13j1g6pvismw04br9"; depends=[rJava RWeka RWekajars]; }; Deducer = derive2 { name="Deducer"; version="0.7-9"; sha256="14kakyf28i654pndlswjzp6h3h7szpznrg6xznqg150mmn0bs3s6"; depends=[car e1071 effects foreign ggplot2 JGR MASS multcomp plyr rJava scales]; }; DeducerExtras = derive2 { name="DeducerExtras"; version="1.7"; sha256="0sngsq31469a74y7nhskl82fwy2i0ga68m9g6b1xyhxz1a8kgvlg"; depends=[Deducer irr rJava]; }; @@ -822,8 +842,8 @@ in with self; { DensParcorr = derive2 { name="DensParcorr"; version="1.0"; sha256="15w0ifcq1js0wyjscfhlbga77sgzqpmz7zmwa77y92iwna8q66ad"; depends=[clime gplots]; }; Density_T_HoldOut = derive2 { name="Density.T.HoldOut"; version="2.00"; sha256="0kh5nns1kqyiqqfsgvxhx774i2mf4gcim8fp5jjyq577x4679r31"; depends=[histogram]; }; DepthProc = derive2 { name="DepthProc"; version="2.0.2"; sha256="0n9hs6fp047gnd8y87rzx5qcr3hqg3pdck97hcbzkd8jsi1b1daw"; depends=[colorspace geometry ggplot2 lattice MASS np Rcpp RcppArmadillo rrcov sm zoo]; }; - Deriv = derive2 { name="Deriv"; version="3.8.3"; sha256="16yrd97vb7bb8dhnk3cw110jidzvp1xcwkyfd8ngg3zdw9b4d07n"; depends=[]; }; - DescTools = derive2 { name="DescTools"; version="0.99.22"; sha256="0nl2zk0sp4fdilg6a5rgkidjg7xncy252ihbqpjia4bda8y23mkn"; depends=[BH boot expm foreign manipulate MASS mvtnorm Rcpp]; }; + Deriv = derive2 { name="Deriv"; version="3.8.4"; sha256="1la2afxr9nilb32s3nc1j3spxzgcqn48aywq96pckpjk8vypsjyy"; depends=[]; }; + DescTools = derive2 { name="DescTools"; version="0.99.23"; sha256="0y3br8s2kvvi552xv5ir2av810l8qknc06hw9x6bryjxj42ywa4i"; depends=[BH boot expm foreign manipulate MASS mvtnorm Rcpp]; }; DescToolsAddIns = derive2 { name="DescToolsAddIns"; version="0.9.2"; sha256="1bznlg7p1b7n510rg5rji6qmmpdwgh4nazh1mps7r9rjhjp4w0qq"; depends=[DescTools rstudioapi]; }; DescribeDisplay = derive2 { name="DescribeDisplay"; version="0.2.5"; sha256="02b6yjgklsdjh3rikc8f5wfx08ymbygr3fyq1c134xhffhykrlgp"; depends=[GGally ggplot2 plyr reshape2 scales]; }; DescriptiveStats_OBeu = derive2 { name="DescriptiveStats.OBeu"; version="1.2.1"; sha256="0mb33ihqr8jj1ispykvyc7jn1wyaagb535ya5jgwlqrians41ihc"; depends=[jsonlite RCurl reshape]; }; @@ -839,7 +859,7 @@ in with self; { DiceEval = derive2 { name="DiceEval"; version="1.4"; sha256="06p3v161ig714k7z59iji64xhxw1a68kqhnlwhwpjpyrx7kn137b"; depends=[DiceKriging]; }; DiceKriging = derive2 { name="DiceKriging"; version="1.5.5"; sha256="035kbk633v4kfb44wiyb556sayl73c24fc1w09r3f33shqgidzjm"; depends=[]; }; DiceOptim = derive2 { name="DiceOptim"; version="2.0"; sha256="1hx4379yb6d36c494qc237vld4jnfxq18m994p5ii9ks6s7amifn"; depends=[DiceDesign DiceKriging mnormt pbivnorm randtoolbox rgenoud]; }; - DiceView = derive2 { name="DiceView"; version="1.3-1"; sha256="0c7i1jy13d5bj822q1rp0d7gmmfjd00jaah34pnj8fzwyrq404z9"; depends=[DiceEval DiceKriging rgl]; }; + DiceView = derive2 { name="DiceView"; version="1.3-2"; sha256="0ny9gbaycrq3lr4gqil1yyhkkyxmabl8w6cmkkzlx3yaara0idkf"; depends=[DiceEval DiceKriging rgl]; }; DidacticBoost = derive2 { name="DidacticBoost"; version="0.1.1"; sha256="0z1h61n6nfjvb64fgkzi1sq7ag747crhh593hxkx0cpza29778rz"; depends=[rpart]; }; Diderot = derive2 { name="Diderot"; version="0.12"; sha256="1cq8yk4r0csnslp286hzs04zzq44q0frz0kyll9jhqjil34qh0x7"; depends=[data_table doParallel foreach igraph RCurl splitstackshape stringi]; }; DiffCorr = derive2 { name="DiffCorr"; version="0.4.1"; sha256="1kxp9dbiww086rmvmjvfhbk7jl36dkj88qwii6zg57llf7l5l4hm"; depends=[fdrtool igraph multtest pcaMethods]; }; @@ -849,11 +869,11 @@ in with self; { DiffusionRjgqd = derive2 { name="DiffusionRjgqd"; version="0.1.1"; sha256="1yb1jaq324qm2x8cl3bs2dflnsx8yfygpw2m3kk5hzaai9gfkqjf"; depends=[colorspace Rcpp RcppArmadillo rgl]; }; Digiroo2 = derive2 { name="Digiroo2"; version="0.6"; sha256="1b1ahhqz5largjadlk5n6nw2183c05k28mksb1wm26y0lps0vdgr"; depends=[maptools spatstat spdep]; }; DirectStandardisation = derive2 { name="DirectStandardisation"; version="1.2"; sha256="060nscnn7wamnbb45a55wr6rirlbpwwjz0kxiw3aiqkm16ilzfbs"; depends=[]; }; + DirectedClustering = derive2 { name="DirectedClustering"; version="0.1.1"; sha256="1shdqz0c5bbgknvfqr3ais26cb5mpywnah3d3584w97sy8v7gxm2"; depends=[igraph]; }; Directional = derive2 { name="Directional"; version="3.0"; sha256="08m6yg2jpz8fcdw4dlbpb1679d72q059ab2sgc3wj53m7vqirm4a"; depends=[doParallel foreach MASS RcppZiggurat Rfast]; }; DirichletReg = derive2 { name="DirichletReg"; version="0.6-3"; sha256="0qvnsbyn3livp5jrnxskf5sf7f2svy5mqkmnhzncb9bwf3kxpyla"; depends=[Formula maxLik rgl]; }; - DisHet = derive2 { name="DisHet"; version="0.2.0"; sha256="1n65vaiamji8c334nd1j11jc5xp3y7gvhs5j2vw8d71874v7w1da"; depends=[gtools matrixStats]; }; + DisHet = derive2 { name="DisHet"; version="0.2.1"; sha256="1w0fpc73pk1fs05j328aw368qcabxfxz97zfqr5mda7wcmkwwnj3"; depends=[gtools matrixStats]; }; Disake = derive2 { name="Disake"; version="1.5"; sha256="1fw45fmnir6h34jw8917mhyz6cgzbq4ywyyf51qxhm68wgzy9h17"; depends=[]; }; - DiscML = derive2 { name="DiscML"; version="1.0.1"; sha256="0qkh0yak1kmzxxx0cqb47zgrj8v2s1d5danpibwwg43j138sb73l"; depends=[ape]; }; DiscreteInverseWeibull = derive2 { name="DiscreteInverseWeibull"; version="1.0.2"; sha256="0vjsvl4m4zccfgizv7mzidbbpzqcm101x448vllcdcrn2xlnkmnq"; depends=[Rsolnp]; }; DiscreteLaplace = derive2 { name="DiscreteLaplace"; version="1.1.1"; sha256="17w4vjvsm7jacvwckjczyah3hglq044r3m6vqdcrg8haz884rav2"; depends=[]; }; DiscreteWeibull = derive2 { name="DiscreteWeibull"; version="1.1"; sha256="1rg3ax6jryagf5d3h8m44x9wyhr2qff3srfa9zrk6i64p1ahk9lr"; depends=[Rsolnp]; }; @@ -874,7 +894,7 @@ in with self; { DoTC = derive2 { name="DoTC"; version="0.2"; sha256="1hjjkmxrbiysy3xl6n4q7kxcygdq68jcsgki1p937zj9a17sa62j"; depends=[ggplot2 plyr]; }; Dodge = derive2 { name="Dodge"; version="0.8"; sha256="1vnvqb2qvl6c13s48pyfn1g6yfhc60ql3vn7yh2zymxcsr1gxgcw"; depends=[]; }; Dominance = derive2 { name="Dominance"; version="1.0.17"; sha256="07xsyadmq47szvp1vnf53ijq43pwd9g7554fgl803fhkwq6b3jgh"; depends=[chron gdata igraph XLConnect]; }; - DoseFinding = derive2 { name="DoseFinding"; version="0.9-15"; sha256="0sc3z62jn2jh6kjacqpf9vnpv0wzihcln24m5ipspmz0n1b0nvz7"; depends=[lattice mvtnorm]; }; + DoseFinding = derive2 { name="DoseFinding"; version="0.9-16"; sha256="0ncr95lf4mifmx6n2qkg8m3cn326zj9w4hr7afsdxg155l11w89z"; depends=[lattice mvtnorm]; }; DoubleCone = derive2 { name="DoubleCone"; version="1.1"; sha256="1kbvsj93nn2306s6pgqiiznmlcn2nqsgcxinihl613ivczxhzpqg"; depends=[coneproj MASS Matrix]; }; DoubleExpSeq = derive2 { name="DoubleExpSeq"; version="1.1"; sha256="00xpj5xmpgmvp6h76imkmghrnlfk6c50ydvv0jram6m6ix3z8323"; depends=[numDeriv]; }; Dowd = derive2 { name="Dowd"; version="0.12"; sha256="1fgaq22n7gm8pqxdfkiayqgjfqjn7knjjjr1x12jgv77cv08xyjk"; depends=[bootstrap forecast MASS]; }; @@ -886,11 +906,12 @@ in with self; { DstarM = derive2 { name="DstarM"; version="0.2.2"; sha256="014xlj5kipl2jpcgcqs1ynw05x17wbsgc5mhfjn3p96bbp6pkzzy"; depends=[DEoptim ggplot2 rtdists RWiener]; }; DunnettTests = derive2 { name="DunnettTests"; version="2.0"; sha256="1sf0bdxays10n8jh2qy85fv7p593x58d4pas9dwlvvah0bddhggg"; depends=[mvtnorm]; }; DySeq = derive2 { name="DySeq"; version="0.22"; sha256="1sx6mg0bcqb5ff6x305k43zx3fwd16rvxc7xb3ai5h3w7fs9zz7y"; depends=[boot MASS TraMineR]; }; + Dykstra = derive2 { name="Dykstra"; version="1.0-0"; sha256="1rc1409ky0ysqr3ccq28yhbs94m6d0z2dfa66k4c7irxjvbagwz6"; depends=[]; }; DynClust = derive2 { name="DynClust"; version="3.13"; sha256="020zl2yljp47r03rcbzrbdmwk482xx27awwzv4kdrbchbzwhxqgm"; depends=[]; }; DynNom = derive2 { name="DynNom"; version="4.1.1"; sha256="1c4hykp8fwr6h5y09m4qs23bmbaj6im2c833mv2ymlhy5bwhmnfi"; depends=[BBmisc compare ggplot2 plotly rms shiny stargazer survival]; }; - DynTxRegime = derive2 { name="DynTxRegime"; version="3.01"; sha256="0kcg4yqh1srhcn4wp0k97ppwn6w8vh05y9ssn82sjhlgxfbhzzjx"; depends=[dfoptim kernlab modelObj rgenoud]; }; + DynTxRegime = derive2 { name="DynTxRegime"; version="3.2"; sha256="0a6s28vc7kf6r7qmy9xjmxm39fl0ijnbl01d8rzr4w9sbnr3n85l"; depends=[dfoptim kernlab modelObj rgenoud]; }; DynamicDistribution = derive2 { name="DynamicDistribution"; version="1.1"; sha256="1s78hpj2pxjs4vixin1i816qjbn3wk7b8rd2zdjp4d4rbxifcqf5"; depends=[]; }; - EAinference = derive2 { name="EAinference"; version="0.2.2"; sha256="0lff44j2n63r6dnrxh5niaw380bbww41l89fajmkpcimxhpwqkk1"; depends=[hdi limSolve MASS msm mvtnorm Rcpp RcppArmadillo]; }; + EAinference = derive2 { name="EAinference"; version="0.2.3"; sha256="1kzcfya3z6rf1vqjn72yjymdhrn4dzgmwifh3w6k22cy5jxffzn4"; depends=[hdi limSolve MASS msm mvtnorm Rcpp RcppArmadillo]; }; EBASS = derive2 { name="EBASS"; version="0.1"; sha256="14hxzj06wrc4ihflr7dqk28fsjwbcizr0jy54vhv0mk1y1gd4201"; depends=[]; }; EBEN = derive2 { name="EBEN"; version="4.6"; sha256="0gcf5b2viiq69vs8bd8nhk65g9sbzgg212w7zpnz4y6cv9jkk5zz"; depends=[]; }; EBMAforecast = derive2 { name="EBMAforecast"; version="0.52"; sha256="1809ia0dpkilprv7x19drp1v2qckk0wm596f1i1vl0k37wbhcziv"; depends=[abind Hmisc plyr Rcpp separationplot]; }; @@ -898,14 +919,17 @@ in with self; { EBglmnet = derive2 { name="EBglmnet"; version="4.1"; sha256="0wlscmimj74alcr8k5h1g3alvlpss4g2ah7zkpd42akam3zb4s5z"; depends=[]; }; EBrank = derive2 { name="EBrank"; version="1.0.0"; sha256="1qzhrr3n2zv31mjp224b35324nr9nigzazyfv11j4zhwl1ipf632"; depends=[]; }; ECFsup = derive2 { name="ECFsup"; version="0.1-2"; sha256="0fpcab0gjgsc3sx0plpx068rw3a7kfzs2nyrr477a5m0rcbqf1kh"; depends=[foreach Rcpp RcppArmadillo]; }; - ECOSolveR = derive2 { name="ECOSolveR"; version="0.3-2"; sha256="1awkylhsd0l5k2iflcx5y2779zhxjzr8l0xrk7v24m4nak6xj1jg"; depends=[Matrix]; }; + ECOSolveR = derive2 { name="ECOSolveR"; version="0.4"; sha256="14dpja9wr1qqip388c8b6xvdvdpwwmyq5piv182ir0rwrla5nzdb"; depends=[Matrix]; }; ECctmc = derive2 { name="ECctmc"; version="0.2.4"; sha256="1aw0cbfgzlrkyc3m1rfhbdcdyb8wjcfx6p2mz1hvds86mf1pzv1i"; depends=[Rcpp RcppArmadillo]; }; - ECharts2Shiny = derive2 { name="ECharts2Shiny"; version="0.2.12"; sha256="0g0591dddkdvpq1wgw5wjz0b0qlwkjxi0zz9g33qs442ijq8v1wc"; depends=[jsonlite shiny]; }; + ECharts2Shiny = derive2 { name="ECharts2Shiny"; version="0.2.13"; sha256="0dq8ja4ydxnc7qx35qhh9ryqgi7ambwz6ka2821mmq3p994crswn"; depends=[jsonlite shiny]; }; + ECoL = derive2 { name="ECoL"; version="0.1.0"; sha256="0rizs41fk4w3lwrc4xw8hl035pvg0y746w1zy3bs8ch0hqyplhdm"; depends=[cluster e1071 igraph MASS]; }; + EDA = derive2 { name="EDA"; version="1.0.1"; sha256="13qyi7yh1xqsyyvd51j5dl6dx4xh6kr97pz5v4wn46nbx6vna0dk"; depends=[ggplot2]; }; EDFIR = derive2 { name="EDFIR"; version="1.0"; sha256="0nv1badyg1dri6z91fvs68a72g22vdg0rpi3fkpxw527r11fvrrv"; depends=[geometry lpSolve MASS vertexenum]; }; EDISON = derive2 { name="EDISON"; version="1.1.1"; sha256="12cc13ng5fc4nm0nvqxqplpb2ycz4cln73xqkk85dka2fnpykjc7"; depends=[corpcor MASS]; }; + EDMeasure = derive2 { name="EDMeasure"; version="1.1.0"; sha256="1q9k0wp3wi7sqgcn3j74r8q525q0kbcx4nlm8i0frzpb75yak7ab"; depends=[dHSIC energy rBayesianOptimization]; }; EDR = derive2 { name="EDR"; version="0.6-6"; sha256="10m92p3fy5z2kca4h9awwmvs4pqri92habkvgjvjl5ira09yvyi7"; depends=[sm]; }; EEM = derive2 { name="EEM"; version="1.1.1"; sha256="0w20kakgcpyhfi7fcrss4w67pbaj87hi2scy7g05q3sg2ygac7gj"; depends=[colorRamps ggplot2 R_utils reshape2 sp]; }; - EFAutilities = derive2 { name="EFAutilities"; version="1.1.1"; sha256="028nx0a80vfs054afkjfvs9ql7l7fw64b014xgqy0jn0z83s4yj5"; depends=[GPArotation mvtnorm plyr]; }; + EFAutilities = derive2 { name="EFAutilities"; version="1.2.1"; sha256="1hgmj9zk9mwqwmqila1ana6jzqg55aj535pkrzai2y6yq45dvfh9"; depends=[GPArotation mvtnorm plyr]; }; EFDR = derive2 { name="EFDR"; version="0.1.1"; sha256="0jgznwrd40g9xmvhrd7b441g79x41ppfdn6vbsbzc0k5ym1wzb1p"; depends=[doParallel dplyr foreach gstat Matrix sp tidyr waveslim]; }; EFS = derive2 { name="EFS"; version="1.0.3"; sha256="1q8cf8dnxpv5s3lr9145y0wjhak4rz18dzah4xfs5qr4c8nlpl54"; depends=[party pROC randomForest ROCR]; }; EGRET = derive2 { name="EGRET"; version="2.6.0"; sha256="0alr47pmq1ml64j500vkqwmvrqa3i1ccbf3w7w44fbbjy1vfp04a"; depends=[dataRetrieval fields lubridate survival truncnorm]; }; @@ -923,18 +947,17 @@ in with self; { EMA = derive2 { name="EMA"; version="1.4.5"; sha256="16iq5a3yrilchqmkyb4g5bmmgpw6psm88n52gmlax75xbiwk8261"; depends=[affy AnnotationDbi Biobase biomaRt cluster FactoMineR gcrma GSA heatmap_plus MASS multtest siggenes survival xtable]; }; EMAtools = derive2 { name="EMAtools"; version="0.1.3"; sha256="1kzna29kd6s2hgli5azrfz85mbyl1x6knvhhhny2scf7a1fcijsy"; depends=[DataCombine ggplot2 lmerTest sjstats]; }; EMC = derive2 { name="EMC"; version="1.3"; sha256="0sdpxf229z3j67mr9s7z4adzvvphgvynna09xkkpdj21mpml23p6"; depends=[MASS mvtnorm]; }; - EMCluster = derive2 { name="EMCluster"; version="0.2-8"; sha256="15ngm8k0iscasi1jcn4ffya0y4rq5llj5m7gjv8f61rw31yfyjm0"; depends=[MASS Matrix]; }; + EMCluster = derive2 { name="EMCluster"; version="0.2-10"; sha256="1p8zy0f10383svgm2di0gmqwmn4m8ydsn16xh5rymssg831xwql6"; depends=[MASS Matrix]; }; EMD = derive2 { name="EMD"; version="1.5.7"; sha256="0m2g7akg9h964d6qr1mj20h9pcb2fcmala3skhl0qpy8qz01w5ck"; depends=[fields locfit]; }; EML = derive2 { name="EML"; version="1.0.3"; sha256="04qz4rwq0amy9lp6358qjjql46ky2slqrvipngym5klqvm9vi0zi"; depends=[uuid xml2]; }; EMMAgeo = derive2 { name="EMMAgeo"; version="0.9.4"; sha256="1i36s8mzp04alff6lqkc798xjzgn61wdpl5i0awjdvg26ka8v7lj"; depends=[GPArotation limSolve shape shiny]; }; - EMMIXcontrasts2 = derive2 { name="EMMIXcontrasts2"; version="0.1.2"; sha256="016vy4cgi8zyzjalp3wi1z49363xddy95iivlqdmb3lcgfl3i7iq"; depends=[]; }; - EMMIXcskew = derive2 { name="EMMIXcskew"; version="0.9-4"; sha256="0gzy3nrqw880p4sr08qfbyyjqgq08brfm9pk7xkibdnvlrl6mld2"; depends=[MASS mnormt rgl]; }; - EMMIXskew = derive2 { name="EMMIXskew"; version="1.0.2"; sha256="1avg6q3z77786wx6gpcn53sv5lhj3d6597kp885i418k4hyh72qv"; depends=[KernSmooth lattice mvtnorm]; }; + EMMIXcskew = derive2 { name="EMMIXcskew"; version="0.9-5"; sha256="1ys5kvns6jlw2lk9m6xcy71wx1d581cmphiaxnp3hsqimc8wz7hq"; depends=[MASS mnormt rgl]; }; + EMMIXskew = derive2 { name="EMMIXskew"; version="1.0.3"; sha256="05y1ivbzbsfab90925l3ahzd3b8y5kjfk3f0p2s9s3sfyxphqah7"; depends=[KernSmooth lattice mvtnorm]; }; EMMIXuskew = derive2 { name="EMMIXuskew"; version="0.11-6"; sha256="0japf0l0sj84jna7b5kirp6pgqa4c923ldwphb16ch2xxrgk5n5k"; depends=[MASS]; }; EMMLi = derive2 { name="EMMLi"; version="0.0.3"; sha256="1b36kyzvrdljmkysggv8jyaip78pj32ms0xhj2y568hd419lkh2p"; depends=[]; }; EMMREML = derive2 { name="EMMREML"; version="3.1"; sha256="0qwj4jlfhppjxwcjldh49b6idnagazrxybaid3k2c269wvxwvddq"; depends=[Matrix]; }; EMP = derive2 { name="EMP"; version="2.0.2"; sha256="0l9wyxmcl8b6jiykc4mim6npmz5wrsapk2wgxbfhg27dwdb847ha"; depends=[ROCR]; }; - EMSC = derive2 { name="EMSC"; version="0.8.2"; sha256="1wclkyq528fhvbr6n5592byjlpi0xszhqzbbzsq64ilg88q9cmaj"; depends=[pracma]; }; + EMSC = derive2 { name="EMSC"; version="0.9.0"; sha256="13d915g7iyv724x35i9mr8msy5mhrpqhhva21vdinxbjdy6vdlr9"; depends=[pracma]; }; EMSaov = derive2 { name="EMSaov"; version="2.2"; sha256="12y0mj72la4ciwzgr38w9ssik4hixjf5kjsjwrvz6z59hi0ldfly"; depends=[shiny]; }; EMT = derive2 { name="EMT"; version="1.1"; sha256="0m3av1x3jcp3hxnzrfb128kch9gy2zlr6wpy96c5c8kgbngndmph"; depends=[]; }; EMVC = derive2 { name="EMVC"; version="0.3"; sha256="1n7fxmqg8762lc7lg50h6wcrxrrz4nvi0xdaganz84l8vp8w90ms"; depends=[]; }; @@ -942,7 +965,6 @@ in with self; { ENMeval = derive2 { name="ENMeval"; version="0.2.2"; sha256="1w8mjcmxxkx8lxxzzbjpv1i7cm6l8hhml7ynp80s9yiprr04bq9c"; depends=[dismo doParallel foreach raster rJava]; }; ENiRG = derive2 { name="ENiRG"; version="1.0.1"; sha256="0yjy7g0pia4g18h7mawkxn77dnnqcajnbml21rrv63qwlr347355"; depends=[ade4 fgui gdata miniGUI raster rgrass7 sp]; }; ENmisc = derive2 { name="ENmisc"; version="1.2-7"; sha256="07rix4nbwx3a4p2fif4wxbm0nh0qr7wbs7nfx2fblafxfzhh6jc7"; depends=[Hmisc RColorBrewer vcd]; }; - EPGLM = derive2 { name="EPGLM"; version="1.1.2"; sha256="1x7n16pjr38gh5llraszjwgm650zmcm14j6v1kc5k81g4ghgdsq6"; depends=[BH MASS Rcpp RcppArmadillo]; }; EQL = derive2 { name="EQL"; version="1.0-0"; sha256="0lxfiizkvsfls1km1zr9v980191af6qjrxwcqsa2n6ygzcb17dp5"; depends=[lattice ttutils]; }; EQUIVNONINF = derive2 { name="EQUIVNONINF"; version="1.0"; sha256="103wrry0cmikprihmgx8y4kk1pnbjis7rs1xw13w14v902xkr2rq"; depends=[BiasedUrn]; }; ERP = derive2 { name="ERP"; version="1.1"; sha256="00w9zz5rp1asvk13sj9gkd14n2akbclsyz26jp5a3r85fh6chdm0"; depends=[fdrtool mnormt]; }; @@ -951,11 +973,11 @@ in with self; { ESG = derive2 { name="ESG"; version="0.1"; sha256="1jw6239asv6lwxrz5v0r5pzg6v500bqxg8361sh4jj67rsrc7g9m"; depends=[]; }; ESGtoolkit = derive2 { name="ESGtoolkit"; version="0.1"; sha256="0r09arhsvamdyahini5yhgc43msdxwvn45l57xbfszahsnr3b3aq"; depends=[CDVine ggplot2 gridExtra Rcpp reshape2 ycinterextra]; }; ESKNN = derive2 { name="ESKNN"; version="1.0"; sha256="1w43v3q9i7dkx1qwcl5cgh9wdgg5r4s7vfbkk0vcsq9qd8nbcvfy"; depends=[caret]; }; - ESTER = derive2 { name="ESTER"; version="0.1.0"; sha256="0smrrjnd64g3yvb782h6q4j1p0cirpb31qnmmychdb499wjmd05l"; depends=[dplyr ggplot2 lme4 magrittr rlang]; }; + ESTER = derive2 { name="ESTER"; version="0.2.0"; sha256="1jiyqq5hgqc754r434sik9jnlpw66xz56cjdf5ig95qkffzsg224"; depends=[brms cowplot doParallel dplyr foreach ggplot2 lme4 magrittr rlang tidyr]; }; ETAS = derive2 { name="ETAS"; version="0.4.3"; sha256="08i8i3az5f4nb6cwfyilc0dk84j6i3f3k6bxr2k1lrds1rqx0fla"; depends=[fields lattice maps Rcpp spatstat]; }; ETC = derive2 { name="ETC"; version="1.3"; sha256="1nvb9n0my7h1kq996mk91canxi6vxy3mzhrshrvm13ixvl48lkkh"; depends=[mvtnorm]; }; - ETLUtils = derive2 { name="ETLUtils"; version="1.3"; sha256="13xq9i9fr34kx1nym7nr02gynshzm4jjn4qzx6ydg044b7xl57jp"; depends=[bit ff]; }; - EValue = derive2 { name="EValue"; version="1.0.0"; sha256="0n0k6mia3nncsjchlnv5a0n4kcbnflngdxdnr1l8ar9bri0xwacg"; depends=[ggplot2 metafor]; }; + ETLUtils = derive2 { name="ETLUtils"; version="1.4.1"; sha256="07wqrg7mnxmbdf2ibxj5kppl4sd3l608yfhbbsngkhpsrm203qva"; depends=[bit ff]; }; + EValue = derive2 { name="EValue"; version="1.1.1"; sha256="0fdihngqgl2m7385ih08zzh9y38aal1d9lv7358qf0z68i9bgfa2"; depends=[ggplot2 metafor]; }; EW = derive2 { name="EW"; version="1.1"; sha256="0wc3v9qisiikvlp28xhlgsxb92fhkm6vslia6d0vpihyai0p1h1g"; depends=[]; }; EWGoF = derive2 { name="EWGoF"; version="2.2.1"; sha256="0n1fx6k9ndb2s9ybzizbqz662c9s1f48q6v697pqhnfy9si1nplz"; depends=[Rcpp]; }; EXRQ = derive2 { name="EXRQ"; version="1.0"; sha256="1iqsr52sl2j5q03122a7rsp6n6a2bkysk2r908c89l36gk4sj2i5"; depends=[mnormt quantreg]; }; @@ -968,7 +990,7 @@ in with self; { EbayesThresh = derive2 { name="EbayesThresh"; version="1.4-12"; sha256="07a2dd3za2dc81n6m2xy794sclp3yw7f46lg1igaflh7m9407198"; depends=[wavethresh]; }; Ecdat = derive2 { name="Ecdat"; version="0.3-1"; sha256="1lvfp2ih8ng3kn3cia687j5fd27iwiak7gk3bhgjp8bnlgblqq02"; depends=[Ecfun]; }; Ecfun = derive2 { name="Ecfun"; version="0.1-7"; sha256="0s4hhvwyi411xr7c1fv098nmwqjcyvh8vy65j5w9hd80l864lvkl"; depends=[fda gdata jpeg MASS RCurl stringi TeachingDemos tis XML]; }; - EcoGenetics = derive2 { name="EcoGenetics"; version="1.2.1-2"; sha256="0cv513nxz774lmas90calch22d544jsw97xhng45s3g9f85094av"; depends=[d3heatmap edgebundleR ggplot2 htmlwidgets igraph jsonlite magrittr networkD3 party pheatmap plotly raster reshape2 rgdal rkt SoDA sp]; }; + EcoGenetics = derive2 { name="EcoGenetics"; version="1.2.1-4"; sha256="18l5v7zsmz35brnf6b8qfxbs8906rmyc2kkh9bm96x01m3vx8pkh"; depends=[d3heatmap edgebundleR ggplot2 htmlwidgets igraph jsonlite magrittr networkD3 party pheatmap plotly raster reshape2 rgdal rkt SoDA sp]; }; EcoHydRology = derive2 { name="EcoHydRology"; version="0.4.12"; sha256="03dzdw79s0cnnd7mv6wfxw374yf66dlcmj10xh6sh5i352697xp1"; depends=[DEoptim operators topmodel XML]; }; EcoIndR = derive2 { name="EcoIndR"; version="1.2"; sha256="1p2m4kramcf71xlm9hbk5l5mb8nmjfac1p3csai7m2gmikf559yj"; depends=[]; }; EcoSimR = derive2 { name="EcoSimR"; version="0.1.0"; sha256="13ni3vdfahqjyb9xrv7fmnbj5m5n3jwfh1bl9r0bvhi5w72kb7rj"; depends=[MASS]; }; @@ -989,8 +1011,8 @@ in with self; { EloChoice = derive2 { name="EloChoice"; version="0.29"; sha256="1r54laim7i8hzgyir47xq7qw8hxzsdw1ss10sljq1rm2lpsci6wk"; depends=[Rcpp RcppArmadillo]; }; EloRating = derive2 { name="EloRating"; version="0.43"; sha256="0gzpi4qjiqn0lzjwy37pkz6fg7dkp2hv2dfqgzfk32wsj0bswgab"; depends=[zoo]; }; ElstonStewart = derive2 { name="ElstonStewart"; version="1.1"; sha256="1y2g4x3fhi78c2406bk8r8c3x9zhx8ya3qlbnypdm65j0minixsn"; depends=[digest kinship2]; }; - Emcdf = derive2 { name="Emcdf"; version="0.1.1"; sha256="0lflaynipdpd14xpi7db5w7a92z53vjyjhp8whv6yynl13kxrcwv"; depends=[lattice Rcpp]; }; - EmiStatR = derive2 { name="EmiStatR"; version="1.2.0"; sha256="0g1bs8018vxgnwb578iz5nin13khk7wjj0in47y250j2kcz5nvgn"; depends=[doParallel foreach lattice shiny]; }; + Emcdf = derive2 { name="Emcdf"; version="0.1.2"; sha256="0jb59jp1drcwipmk6yzg0cl366i8nhffa13c3x3fmhaj7ifv77vv"; depends=[lattice Rcpp]; }; + EmiStatR = derive2 { name="EmiStatR"; version="1.2.0.6"; sha256="1ygi3rz4xc7y0m1jd23g3li62br7fs0dcm6fj8kha5q93xn6yvrx"; depends=[doParallel foreach lattice shiny xts zoo]; }; EmpiricalCalibration = derive2 { name="EmpiricalCalibration"; version="1.3.6"; sha256="0fiwvdzcyz6ayzqfa6j2ygpab1cwbi04gd2c2g1j9qbdq95myipa"; depends=[ggplot2 gridExtra]; }; EnQuireR = derive2 { name="EnQuireR"; version="0.10"; sha256="00kyclcr8da79lwpqa1vzkwn6pgf197h2biackwgphb0byhi8ssx"; depends=[FactoMineR MASS Rcmdr SensoMineR]; }; EnergyOnlineCPM = derive2 { name="EnergyOnlineCPM"; version="1.0"; sha256="1a3wvclqdwcvq5inhliwjnd7xzqbjvzs8h8ncy6qlhjq6s5n7nm8"; depends=[energy MASS]; }; @@ -1002,19 +1024,21 @@ in with self; { EnsemblePenReg = derive2 { name="EnsemblePenReg"; version="0.7"; sha256="00218yh0vzlb5g94asq5nz4i8blppskdzz9fl4c0v3fld3kxz2md"; depends=[EnsembleBase glmnet]; }; EntropyEstimation = derive2 { name="EntropyEstimation"; version="1.2"; sha256="13kb83lfpkw6yq687j0ci23yn5c9dqjibybyyaplk6jixy08lrvy"; depends=[]; }; EntropyExplorer = derive2 { name="EntropyExplorer"; version="1.1"; sha256="02ljnq9ayxg4lrrnb6nlxr1k5ki8dd5i8hjb9fvvb19hwr2id5h4"; depends=[]; }; - EnvCpt = derive2 { name="EnvCpt"; version="0.1.1"; sha256="052yz26lypcffwnxdqxm2d029rzcdkw5dvf2xyvyhi5lcnxjrn9r"; depends=[changepoint forecast MASS zoo]; }; + EnvCpt = derive2 { name="EnvCpt"; version="1.0"; sha256="0rdcxb924ij3rdcnzfz8pxahvwza2qi2siqpxsafjkg2mrqil9kj"; depends=[changepoint forecast MASS zoo]; }; EnvNicheR = derive2 { name="EnvNicheR"; version="1.4"; sha256="0hxx9wmzlw0clvdgdsy8msc78nvm81j3naxr57i7lqqa360sjy3a"; depends=[IDPmisc]; }; EnvStats = derive2 { name="EnvStats"; version="2.3.0"; sha256="0f0sda26in2a25vq8xr6pkskjk10q2pg463h9c1xap3bghq4xgc3"; depends=[ggplot2 MASS nortest]; }; EnviroPRA = derive2 { name="EnviroPRA"; version="1.0"; sha256="0yirh3vy7wap0qmm3kvjz9y68gcvp9i8qshv80wh8aijxwklpr8n"; depends=[fitdistrplus kSamples MASS truncdist]; }; EnviroStat = derive2 { name="EnviroStat"; version="0.4-2"; sha256="0ckax6vkx0vwczn21nm1dr8skvpm59xs3dgsa5bs54a3xhn5z9hs"; depends=[MASS]; }; - Epi = derive2 { name="Epi"; version="2.19"; sha256="1zd5q5w8l9gvq0x5j00vwfb61kfadbziqmff5fm0cmwnvpizl55k"; depends=[cmprsk data_table etm MASS Matrix numDeriv plyr survival zoo]; }; + Epi = derive2 { name="Epi"; version="2.24"; sha256="0vrcp7i5mhxfx1401zpzjbkbbyqd873mzjcvfz0bwcxrk4a5gld7"; depends=[cmprsk data_table etm MASS Matrix numDeriv plyr survival zoo]; }; EpiBayes = derive2 { name="EpiBayes"; version="0.1.2"; sha256="1qfir0dl085c9ib1acsygmj7gihc4ar98k5niqdsgnmji88h17y2"; depends=[coda epiR scales shape]; }; EpiContactTrace = derive2 { name="EpiContactTrace"; version="0.12.0"; sha256="1i84fslz8sdngvkv34zhzjwzrzzxx6f4s31p8f5smmf028jlpyys"; depends=[]; }; EpiCurve = derive2 { name="EpiCurve"; version="2.0-1"; sha256="15y6nlinw3ppi4bn8xpsrch1avn7642f06lcsv2bjyi1carhfqkw"; depends=[dplyr ggplot2 ISOweek RColorBrewer scales timeDate]; }; EpiDynamics = derive2 { name="EpiDynamics"; version="0.3.0"; sha256="0hpysjl8wfgylbp4ddxmi5msvlp1w70c6pxggc2bwdgap3s127f3"; depends=[deSolve ggplot2 reshape2]; }; EpiEstim = derive2 { name="EpiEstim"; version="1.1-2"; sha256="0r56iglhkrqvlsf3gbahd544h944fmbyn6jdc113rhjscf6dl605"; depends=[]; }; - EpiILM = derive2 { name="EpiILM"; version="1.2"; sha256="1mp6j1yk9vzs88clkpwgk0qlbc5b4m94j3isgirsq346006q5jil"; depends=[]; }; - EpiModel = derive2 { name="EpiModel"; version="1.5.0"; sha256="0bmd98dk7gh9x4kdgrdksj88216vxgwmgnk3vfv9caj8b91af9j4"; depends=[ape deSolve doParallel ergm foreach lazyeval network networkDynamic RColorBrewer tergm]; }; + EpiILM = derive2 { name="EpiILM"; version="1.4.1"; sha256="01cp02c6ylx17cwvzs22zh7p18ggyqzrky5393xbjxqlwraf970n"; depends=[coda]; }; + EpiILMCT = derive2 { name="EpiILMCT"; version="1.0"; sha256="1s7f4g1d44mqp475z5cn97dqv6b1caxmfq1p6gr1w7jvgq0dfqp5"; depends=[]; }; + EpiModel = derive2 { name="EpiModel"; version="1.6.1"; sha256="0jmwrpcfrfwrw5zwvwl0cv961nvqfvxjggx93iyc8z8bd6mf1wba"; depends=[ape deSolve doParallel ergm foreach ggplot2 lazyeval network networkDynamic RColorBrewer tergm]; }; + EpiStats = derive2 { name="EpiStats"; version="1.0"; sha256="17i8i3v8qpwas4h6g8sbdl42syg20fm22c7p1bnv4nzx28p9yzhy"; depends=[dplyr epiR]; }; EpiWeek = derive2 { name="EpiWeek"; version="1.1"; sha256="19bvjiiz8qn9nlvf3nq238qi1hszlm6asrc03p8ykp6gpl2pi6js"; depends=[]; }; EpistemicGameTheory = derive2 { name="EpistemicGameTheory"; version="0.1.2"; sha256="0b2gnrvhlsw85qv63ib32pj55l7w63wgvbrj5rb209g6h46fby8m"; depends=[lpSolve]; }; Eplot = derive2 { name="Eplot"; version="1.0"; sha256="1glmkjjj432z9g4gi56pgvfrm5w86iplirnd5hm4s99qci2hgc64"; depends=[]; }; @@ -1039,21 +1063,19 @@ in with self; { ExceedanceTools = derive2 { name="ExceedanceTools"; version="1.2.2"; sha256="084sc6pggfbcyavhfnd5whyigw7dyjhb4cxmxi0kh2jiam5k8v5b"; depends=[SpatialTools splancs]; }; ExcessMass = derive2 { name="ExcessMass"; version="1.0"; sha256="1z8l1lja02wxw8l72s3bq6sgjymn5929n123xk6b7ndd52zlfgf5"; depends=[]; }; ExomeDepth = derive2 { name="ExomeDepth"; version="1.1.10"; sha256="11lg1n9wls96cg1byj5bfircw4bsf0rbk37h8fl0hkh29m6gyy16"; depends=[aod Biostrings GenomicAlignments GenomicRanges IRanges Rsamtools VGAM]; }; - ExpDE = derive2 { name="ExpDE"; version="0.1.2"; sha256="0q95d5gklg834f02b2p252jb3kbbjr4sj3wdak9ljibscnnlckml"; depends=[]; }; + ExpDE = derive2 { name="ExpDE"; version="0.1.4"; sha256="0yjsap92dd1sb23fhw69i0ddk3lyj5f4kwp9rvz4k0vxry10hx7g"; depends=[assertthat]; }; ExpDes = derive2 { name="ExpDes"; version="1.1.2"; sha256="0qfigbx06b3p04x5v7wban139mp8hg8x77x6nzwa4v6dr226qbkv"; depends=[]; }; ExpDes_pt = derive2 { name="ExpDes.pt"; version="1.1.2"; sha256="0khw2jhg2vxcivgr20ybvrsqhd8l8bir5xjmr4m44za9nhap43bz"; depends=[]; }; ExpRep = derive2 { name="ExpRep"; version="1.0"; sha256="0spv3wd9c8sr338n5kdzrs28yh7s90fl70wsdnkibmlxhnh3ay3g"; depends=[]; }; - ExplainPrediction = derive2 { name="ExplainPrediction"; version="1.2.3"; sha256="11gc7nabz3776igj6z0mwyqqmislsxxq3ag4rfjk3k7xvkb9g6jy"; depends=[CORElearn semiArtificial]; }; - ExtDist = derive2 { name="ExtDist"; version="0.6-3"; sha256="1vsxm578bb70wnz3mxm7y1n5vs0x5pby99hvxg5y5ksh2g2ascwa"; depends=[numDeriv optimx]; }; - ExtremeBounds = derive2 { name="ExtremeBounds"; version="0.1.5.2"; sha256="010k2ddrrmrv4ayr009sm0vdgql5n1hy2b7rxyggj8iqsm8lkxim"; depends=[Formula]; }; + ExplainPrediction = derive2 { name="ExplainPrediction"; version="1.3.0"; sha256="14m3b9fsrpfpr8avsnhl8b3bzk2xlhwgkwag5iq8bj7bzvv4yck1"; depends=[CORElearn semiArtificial]; }; + ExtremeBounds = derive2 { name="ExtremeBounds"; version="0.1.6"; sha256="12bc4mmkmggvk3kfmz6nq13fa2470z0bx8smnvq9vf1ypdiiw85y"; depends=[Formula]; }; FACTMLE = derive2 { name="FACTMLE"; version="1.1"; sha256="0qz2i0hnn84bpps1h8jmfkgp5p59axr0wayj9dvl839radrvpqvy"; depends=[rARPACK]; }; FACTscorer = derive2 { name="FACTscorer"; version="0.1.0"; sha256="1gbfpm5szi6w8iyp7ywpqrmdq0wrv5axj29sj9gxjwmjfh5qgqjx"; depends=[]; }; - FADA = derive2 { name="FADA"; version="1.3.2"; sha256="0093j4sgm1fv9bz9h9ldgaac0ggxwwk2qk46c7vxfh9zkmlm6zmb"; depends=[corpcor crossval elasticnet glmnet MASS matrixStats mnormt sda sparseLDA]; }; + FADA = derive2 { name="FADA"; version="1.3.3"; sha256="1kckksim3m6kypm3qnyijgmnrq6dwjfs5jax5dr94giwlpfcdl8q"; depends=[corpcor crossval elasticnet glmnet MASS matrixStats mnormt sda sparseLDA]; }; FAMILY = derive2 { name="FAMILY"; version="0.1.19"; sha256="1912l2zj2cmh8yx8lkg8fpgvfddn6wbi1vrr4yx04mh73gk1s5mk"; depends=[pheatmap pROC]; }; FAMT = derive2 { name="FAMT"; version="2.5"; sha256="0mn85yy9zmiklfwqjbhbhzbawwp2yqrm9pvm8jhasn9c3kw1pcp2"; depends=[impute mnormt]; }; FAOSTAT = derive2 { name="FAOSTAT"; version="2.0"; sha256="06z8c964sf73ld4v9vybqjsdxskxp3ssyv0a3mpcs9la5y7n9jaz"; depends=[classInt data_table ggplot2 labeling MASS plyr RJSONIO scales]; }; FAdist = derive2 { name="FAdist"; version="2.2"; sha256="0nw3w4g7y846bm57xyjnb13g7z746kxf8mb2hnljwwsypcg6i2n8"; depends=[]; }; - FAiR = derive2 { name="FAiR"; version="0.4-15"; sha256="18nj95fiy3j7kf4nzf692dxja3msnaaj5csg745bnajb48l606wz"; depends=[gWidgetsRGtk2 Matrix rgenoud rrcov]; }; FAmle = derive2 { name="FAmle"; version="1.3.5"; sha256="1j6x5bbxnrwp9d6xlxc861xslawzfqhi3d11nphyc97afsz0ymnr"; depends=[mvtnorm]; }; FAwR = derive2 { name="FAwR"; version="1.1.1"; sha256="1hzgaxinq81v4f9743lnlj3bkby8pwmaw1gq0fb4yxazav8y7ihy"; depends=[glpkAPI lattice MASS]; }; FBFsearch = derive2 { name="FBFsearch"; version="1.1"; sha256="17fi501prnwwy5dh7kv7cx2zlz2dknjj542ga024s7jvg7i2rhg0"; depends=[Rcpp RcppArmadillo]; }; @@ -1067,14 +1089,14 @@ in with self; { FDRreg = derive2 { name="FDRreg"; version="0.1"; sha256="17hppvyncbmyqpi7sin9qsrgffrnx8xjcla2ra6y0sqzam1145y4"; depends=[fda mosaic Rcpp RcppArmadillo]; }; FDRsampsize = derive2 { name="FDRsampsize"; version="1.0"; sha256="0g8kawzyi9x5yndvh330wzqw6rvcnprwq56ngd0j6z51hvvw8qhw"; depends=[]; }; FDboost = derive2 { name="FDboost"; version="0.3-0"; sha256="06cwd8534k3h7mk6w9z7fyq0gvb74w12gxh3njmy4m7hw8yzicc8"; depends=[gamboostLSS MASS Matrix mboost mgcv stabs zoo]; }; - FENmlm = derive2 { name="FENmlm"; version="1.0"; sha256="0mq1qa72hsz3pyqjnbyzcc7shr08cq3hng1fz53mn9mvp11vb135"; depends=[MASS Matrix numDeriv]; }; + FENmlm = derive2 { name="FENmlm"; version="2.1.0"; sha256="112n9px4hw2k7kgbkfvw9my6fjwb2ggf2q2xrycn7dp3wblsmz20"; depends=[MASS Matrix numDeriv Rcpp]; }; FFD = derive2 { name="FFD"; version="1.0-6"; sha256="19yqb45qj54fmjkqfjbcqsx3wz6fk8inrqif9ds93xjkm6aaiqgp"; depends=[R2HTML tkrplot]; }; FFTrees = derive2 { name="FFTrees"; version="1.3.5"; sha256="0qz3w7qh8lgl4fn2hmrd4mnp17vaz5yf7kcpcrm038xvqq3w5c5k"; depends=[circlize e1071 igraph progress randomForest rpart stringr yarrr]; }; FField = derive2 { name="FField"; version="0.1.0"; sha256="05q16v2vv64qhbnf2l66dwzmvgzyaq8vxwwdabp534bw7z7zpi8q"; depends=[]; }; FGN = derive2 { name="FGN"; version="2.0-12"; sha256="0jxawb4wm1vcp0131mdnc0r24dw8sd29ih0fc2wh6ahy7mxzajqn"; depends=[akima ltsa]; }; FGSG = derive2 { name="FGSG"; version="1.0.2"; sha256="1r3sjhzf9gcnbcx6rqr1s555z8lcwm3fxl096md2jji336ijlk79"; depends=[]; }; FGalgorithm = derive2 { name="FGalgorithm"; version="1.0"; sha256="1dq6yyb3l6c9fzvk9gs6pb240xb5hvc6fh8p3qd3c91b3m289mcc"; depends=[]; }; - FHDI = derive2 { name="FHDI"; version="1.0"; sha256="0vyqgvcmdlcbplhl19xsl926ncnwwf8r8qb6zng5s8p7w29ydd1k"; depends=[]; }; + FHDI = derive2 { name="FHDI"; version="1.2.1"; sha256="12vw8l0jk2z3i9gz108l2wrha6psqrg508rv1d44r4fss3xa233l"; depends=[]; }; FHtest = derive2 { name="FHtest"; version="1.4"; sha256="1wsn0j9ydpp9nfswiqg21p09kgkvaq8fh0y0h8syqgizah7i8vs2"; depends=[interval KMsurv MASS perm survival]; }; FI = derive2 { name="FI"; version="1.0"; sha256="17qzl8qvxklpqrzsmvw4wq3lyqz3zkidr7ihxc4vdzmmz69pyh2f"; depends=[]; }; FIACH = derive2 { name="FIACH"; version="0.1.2"; sha256="151lc5m8pb7l07kxljm32zy5kd7a4zr5vgsgwsx7ywhijh0r0585"; depends=[Rcpp RcppArmadillo RNiftyReg tkrplot]; }; @@ -1098,11 +1120,11 @@ in with self; { FRAPO = derive2 { name="FRAPO"; version="0.4-1"; sha256="0mjcrplxr0cyybp5hzzwbq5j03w0f3iiiv1yk7mdqr5gb368dchq"; depends=[cccp Rglpk timeSeries]; }; FRB = derive2 { name="FRB"; version="1.8"; sha256="13rp4gqldx84mngrdv5fa9xamkng7b3kgy30ywykcx46gmrym6ps"; depends=[corpcor rrcov]; }; FRCC = derive2 { name="FRCC"; version="1.0"; sha256="1g1rsdqsvwf7wc16dj16y6r0347j8jsv5l1pxvj1h0579zinaf2b"; depends=[calibrate CCP corpcor MASS]; }; - FREGAT = derive2 { name="FREGAT"; version="1.0.3"; sha256="01gc6pcj7fsg3ha2ykaji75b7iasrbjcmqhdlbdnhyzzakg50mpl"; depends=[Matrix]; }; + FREGAT = derive2 { name="FREGAT"; version="1.1.0"; sha256="04rcbwbwi53d8his0ss9hj4s2c28r292f4f2ayl70av7k74nnccy"; depends=[Matrix]; }; FREQ = derive2 { name="FREQ"; version="1.0"; sha256="01nra30pbnqdd63pa87lcws3hnhhzybcjvx2jqyxjghn6khz47j0"; depends=[]; }; - FRESA_CAD = derive2 { name="FRESA.CAD"; version="2.2.1"; sha256="065iywjay4a06w97lg2z98qq0j60flq4srchyg7c2a3pjrwppqc2"; depends=[Hmisc miscTools pROC Rcpp RcppArmadillo stringr]; }; + FRESA_CAD = derive2 { name="FRESA.CAD"; version="3.0.1"; sha256="05hcds1g1hkpr3fww1i462p633xlhwv594fpbphvw8fm10mc0hns"; depends=[Hmisc miscTools pROC Rcpp RcppArmadillo stringr]; }; FREddyPro = derive2 { name="FREddyPro"; version="1.0"; sha256="0h2rdydcx9pwjl1zxghzb5vqynrwdkscyq6c9adjgz4dngfwyzsw"; depends=[dismo ggplot2 lubridate raster RColorBrewer sp]; }; - FRK = derive2 { name="FRK"; version="0.1.6"; sha256="1gya901dqjizmwrs0xg8z4bv73nk1j0d173w3iifhfwqdr5n6xhr"; depends=[digest dplyr ggplot2 Hmisc Matrix plyr Rcpp sp spacetime]; }; + FRK = derive2 { name="FRK"; version="0.1.8"; sha256="037rk9l9bl65wskrii07x4z0g0ic92fx7i0p522bgy53qxa3sbq0"; depends=[digest dplyr ggplot2 Hmisc Matrix plyr Rcpp sp spacetime]; }; FRegSigCom = derive2 { name="FRegSigCom"; version="0.1.0"; sha256="02lvgxxr12rfs4k7dg3rl249nbvfkqaywas3k6jhm378j3j8yaaf"; depends=[fda]; }; FSA = derive2 { name="FSA"; version="0.8.17"; sha256="1mpkbz5q4xbncmwqrylww679ghz52fsr81flavkksb8ljr4z6f7p"; depends=[car dplyr dunn_test epitools gplots lmtest plotrix plyr sciplot]; }; FSAdata = derive2 { name="FSAdata"; version="0.3.6"; sha256="0r4g3s4a7hizxj7zlp8wb5sldnx6kc99vak8ww715bhzpzq40qf8"; depends=[]; }; @@ -1120,12 +1142,12 @@ in with self; { FactoClass = derive2 { name="FactoClass"; version="1.1.6"; sha256="0wkz1kvpsl4z688y9qwp3hlycn66vbsl85s70wwv8ww12z3dwpcd"; depends=[ade4 KernSmooth scatterplot3d xtable]; }; FactoInvestigate = derive2 { name="FactoInvestigate"; version="1.1"; sha256="09fnlqwnijg94yfm3q41pdck9yxaq037m7421g4hdxaigljjb6ml"; depends=[FactoMineR rmarkdown rrcov]; }; FactoMineR = derive2 { name="FactoMineR"; version="1.39"; sha256="12m0yi4w3iw07gx8viwvy8v8l1qh3qr7ghv39cdb2g0zgmnivfxh"; depends=[car cluster ellipse flashClust lattice leaps MASS scatterplot3d]; }; - FactoRizationMachines = derive2 { name="FactoRizationMachines"; version="0.35"; sha256="1cz0cdz0albq9cxhxrsqdvz2q30xsdmmcvgmyiv6k0iwxb6cfhva"; depends=[Matrix Rcpp]; }; FactorsR = derive2 { name="FactorsR"; version="1.2"; sha256="0y6r5ch0h0sag1xinvnjr7q4495naygvi5iiqq9bc51ijv228c0m"; depends=[]; }; - Factoshiny = derive2 { name="Factoshiny"; version="1.0.5"; sha256="1jqk80raqf3kxympkqfayzwwc61yipzh4cbklrb9kmay5ryg4gj9"; depends=[colourpicker FactoMineR shiny]; }; + Factoshiny = derive2 { name="Factoshiny"; version="1.0.6"; sha256="1rb16g4gqq9mmwgpp94j9g5iv5p1psjqllsp9qn7ccccmgn6nnw9"; depends=[colourpicker FactoMineR shiny]; }; Fahrmeir = derive2 { name="Fahrmeir"; version="2016.5.31"; sha256="16fbc1zb9x9p04bl7y5nd375pha6bd3hfqqchlk1bqxrj4879y5g"; depends=[]; }; FamEvent = derive2 { name="FamEvent"; version="1.3"; sha256="0jf4ph9mskycyckyg9biy0h1zk5q6nvj8669zfh8nfnnn2yh3s48"; depends=[kinship2 MASS survival truncnorm]; }; Familias = derive2 { name="Familias"; version="2.4"; sha256="1k6ig2zfkr1a4s3s85ygixmmsrb5m8vqqab8l5ffkspgjvh4dfz2"; depends=[kinship2 paramlink Rsolnp]; }; + FarmSelect = derive2 { name="FarmSelect"; version="1.0.1"; sha256="1qpa46igan3dqgn4ny2lmj08y6jk7krp7pb27afi694nw5l3l97h"; depends=[glmnet ncvreg Rcpp RcppArmadillo]; }; FarmTest = derive2 { name="FarmTest"; version="1.0.1"; sha256="0h829706ilq2czjnn48wpwb09ryx0nwbl953m6p6z1wp4a3dzcv4"; depends=[Rcpp RcppArmadillo]; }; FastBandChol = derive2 { name="FastBandChol"; version="0.1.1"; sha256="1hlgipn792vaylvc0r44clkjcnkns6p241a1fs8sb3gpq81naazk"; depends=[Rcpp RcppArmadillo]; }; FastGP = derive2 { name="FastGP"; version="1.2"; sha256="120qai1yw3yhwm762zridk78n4qclpivwm9f2hkij4bz851qibqv"; depends=[MASS mvtnorm rbenchmark Rcpp RcppEigen]; }; @@ -1141,7 +1163,7 @@ in with self; { FateID = derive2 { name="FateID"; version="0.1.0"; sha256="0q2pq5w93n2zh0qz96b33pc9bbjfp1dqzsi1kcizi468a7jgkfmx"; depends=[caTools DESeq2 destiny lle locfit pheatmap princurve randomForest RColorBrewer rgl Rtsne som]; }; FeaLect = derive2 { name="FeaLect"; version="1.10"; sha256="1r7rgcadrqjhxn2g2w16axygsck82fprxg7l14ai11bn4b7h4pmb"; depends=[lars rms]; }; FeatureHashing = derive2 { name="FeatureHashing"; version="0.9.1.1"; sha256="1y46bk2yddq0n8p1kj6fwi9q23lsblsrlgf7b630vcbvv8mpz5x2"; depends=[BH digest magrittr Matrix Rcpp]; }; - FedData = derive2 { name="FedData"; version="2.4.7"; sha256="14wddw8mnm2imdl1skimyyl9pyqyaz2z5z4kabflkv51l24n93fm"; depends=[curl data_table devtools dplyr foreach Hmisc igraph lubridate magrittr ncdf4 raster readr rgdal rgeos soilDB sp]; }; + FedData = derive2 { name="FedData"; version="2.5.1"; sha256="1yvmy7y26rqrxqap8nicdfrh3s66nyrcn5lvasnairaz1fvx5qxs"; depends=[curl data_table devtools dplyr foreach Hmisc igraph lubridate magrittr ncdf4 raster readr rgdal rgeos soilDB sp stringr]; }; FeedbackTS = derive2 { name="FeedbackTS"; version="1.4"; sha256="1mcsr48hvrpfnk2f0z1bc8556jf848bpd8prm3y46gqdj452wpmm"; depends=[geoR mapdata maps proj4 sp]; }; Fgmutils = derive2 { name="Fgmutils"; version="0.9.4"; sha256="0k5pafgrcb7smklgzgw2mf6npj55nm5fsr6k0xp6ji380rvdxc0y"; depends=[data_table devEMF ggplot2 gridExtra plyr png ReporteRs sqldf stringr]; }; FieldSim = derive2 { name="FieldSim"; version="3.2.1"; sha256="1snz2wja3lsgxys0mdlrjjvk5575cyd64mjipafibwcs97bva5x1"; depends=[RColorBrewer rgl]; }; @@ -1149,18 +1171,19 @@ in with self; { FinAsym = derive2 { name="FinAsym"; version="1.0"; sha256="0v15ydz4sq9djwcdcfp90mk8l951rry7h91d7asgg53mddbxjj6f"; depends=[]; }; FinCal = derive2 { name="FinCal"; version="0.6.3"; sha256="1clvnvhpf2krrf8flhmdxmys6ym3xw3v4v07kk1if4xb0dfk9wgy"; depends=[ggplot2 RCurl reshape2]; }; FinCovRegularization = derive2 { name="FinCovRegularization"; version="1.1.0"; sha256="0h3i46s0rpqvgnqgjwqrlrfa3vv5jn2hm6bqc0ijwmrr9f80g4ir"; depends=[quadprog]; }; - FinancialInstrument = derive2 { name="FinancialInstrument"; version="1.2.0"; sha256="0lx8gqmnapyizlg0qdcjy8xrkpbhj0f7nc95l86a6xy82hz62dzb"; depends=[quantmod TTR xts zoo]; }; + FinancialInstrument = derive2 { name="FinancialInstrument"; version="1.3.1"; sha256="0f1zaclrcmpkdhcfc8a09f7lsf2b7gfyd7js3173qckn84a01f3w"; depends=[quantmod TTR xts zoo]; }; FinancialMath = derive2 { name="FinancialMath"; version="0.1.1"; sha256="11nhphvd7bvbc7xfs85rib763r1mpvxmsj6hgzfib5aifib5k5js"; depends=[]; }; FindAllRoots = derive2 { name="FindAllRoots"; version="1.0"; sha256="0n4wfm21qj5zn06jqnzxa0w9mfn18dqi6hk1jjqa56dxqw1k7vw0"; depends=[]; }; - FindIt = derive2 { name="FindIt"; version="1.1.2"; sha256="0mj68jl7f8n1r97jzyl75cnr60a26kvj07aw85q3hhx7n7vzmldh"; depends=[arm ggplot2 glinternet glmnet igraph lars lmtest Matrix quadprog sandwich]; }; + FindIt = derive2 { name="FindIt"; version="1.1.3"; sha256="1d4cvd4651fdbwmj83q2x9vwvg92fbmq8112z7ian8n96n30rchd"; depends=[arm ggplot2 glinternet glmnet igraph lars lmtest Matrix quadprog sandwich]; }; FindMinIC = derive2 { name="FindMinIC"; version="1.6"; sha256="0vlr56nw32msvz8bljrw82nzrnazncs6nz7zisidffm2v3najkar"; depends=[nlme sets]; }; FinePop = derive2 { name="FinePop"; version="1.4.1"; sha256="06wabgrxfq11ncbll5d0f07kkh23w2hrvjx8k1vy55q9f1dwd3sb"; depends=[]; }; FisHiCal = derive2 { name="FisHiCal"; version="1.1"; sha256="1dds629jlja3vw2l010n1334yh3z10nijqksr0q98ckd2yrwg2rf"; depends=[igraph Rcpp RcppArmadillo]; }; - FishResp = derive2 { name="FishResp"; version="0.1.0"; sha256="12qxqf6i3390kad2cv7pk0nyh2jk5dgsk00pckzfkgsh7ivzhv0h"; depends=[chron lattice]; }; + FishResp = derive2 { name="FishResp"; version="0.2.0"; sha256="1iscxa06pqd6rci3fwdxq2pqyiirr2fzbhs9c9xwyp3c9cmamv8h"; depends=[chron lattice mclust respirometry rMR]; }; FisherEM = derive2 { name="FisherEM"; version="1.4"; sha256="1lhkyyk82i6alxyiqrvy5fx60f8vab0y62zmw5fjaq6h0vczqn3s"; depends=[elasticnet MASS]; }; FitAR = derive2 { name="FitAR"; version="1.94"; sha256="1mkk3kvfq4v0pdabnhbwrk31ji2mv2v6ns16xsvvr1qyg2fnx6hq"; depends=[bestglm lattice leaps ltsa]; }; FitARMA = derive2 { name="FitARMA"; version="1.6"; sha256="1r9mqrqkm4wh3nd6v9wmpj23gw21i4p89p6z4c7639kn4f590ldk"; depends=[FitAR]; }; FixSeqMTP = derive2 { name="FixSeqMTP"; version="0.1.2"; sha256="0v1cwq8gapgandm7wiw8p6av6qigydlpmwi6w02p1y7f0hf5ifnp"; depends=[]; }; + FixedPoint = derive2 { name="FixedPoint"; version="0.2"; sha256="1gmh9ipv010q4lgpnka1rwfza5c7llgjpn7yvcsvlxglmplh8969"; depends=[MASS]; }; FlexDir = derive2 { name="FlexDir"; version="1.0"; sha256="1gb5alv9jsnw0135g63cy757pxhdw6cgwfm8dpcm8dj9zqg10dkm"; depends=[]; }; FlexParamCurve = derive2 { name="FlexParamCurve"; version="1.5-3"; sha256="0766ghwbdd7r4yj5xf31hnknn775ziw1hhrn13wf8bibyd8blz70"; depends=[nlme]; }; FlowRegEnvCost = derive2 { name="FlowRegEnvCost"; version="0.1.1"; sha256="0lw4kv4z0s23jy11y53rxxh7zxa7vajxrcnjgxd74xxs64vjlj88"; depends=[zoo]; }; @@ -1169,6 +1192,7 @@ in with self; { ForIT = derive2 { name="ForIT"; version="1.0"; sha256="0mi2cw09mbc54s8qwcwxin2na1gfyi60cdssy2ncynma7alq3733"; depends=[]; }; ForImp = derive2 { name="ForImp"; version="1.0.3"; sha256="0ai4i6q233sdsi8xilpbkxjqdf4pxw93clkdkhcxal6q43rnf7vd"; depends=[homals mvtnorm sampling]; }; ForeCA = derive2 { name="ForeCA"; version="0.2.4"; sha256="1i19lmhl1kgfnd7zipjr6xp5ir9rvjy13sbq321jaf8ya60bjdd9"; depends=[ifultools MASS reshape2 sapa]; }; + ForecastComb = derive2 { name="ForecastComb"; version="1.1"; sha256="1ki769m3cw3kb8jhbrgiwssspszsipmg2hlbk4ifldi8s19l9m12"; depends=[forecast ggplot2 Matrix mtsdi psych quadprog quantreg]; }; ForecastCombinations = derive2 { name="ForecastCombinations"; version="1.1"; sha256="07vzgm2jy992p1l9b8rsv2lbc8cbfzvql85n5ah4p4l3zjxdxgk9"; depends=[quadprog quantreg]; }; ForecastFramework = derive2 { name="ForecastFramework"; version="0.9.0"; sha256="131h9f148wn89znzsnym43amlvf4s7jzg4f2p7ld9ns7727sf56q"; depends=[abind dplyr lubridate magrittr R6 reshape2]; }; ForestTools = derive2 { name="ForestTools"; version="0.1.5"; sha256="0yjyc5i2jhagvwpzg420zhhygs966ncjn9aggh4gd4zdsi0nzqcx"; depends=[APfun imager raster rgeos sp TileManager]; }; @@ -1179,11 +1203,11 @@ in with self; { FrF2 = derive2 { name="FrF2"; version="1.7-2"; sha256="1qjgx7zbnabbs4zq7hn3j1i1xyy4yjwnz7pn25kz9s3szqr1fk66"; depends=[BsMD DoE_base igraph scatterplot3d sfsmisc]; }; FrF2_catlg128 = derive2 { name="FrF2.catlg128"; version="1.2-1"; sha256="0i4m5zb9dazpvmnp8wh3k51bm0vykh4gncnhdg71mfk4hzrfpdac"; depends=[FrF2]; }; FractalParameterEstimation = derive2 { name="FractalParameterEstimation"; version="1.1.1"; sha256="0l015v99hzmiyic0klvq71ljk9f8ipr57ki7x4cjyz1gam9f84p5"; depends=[]; }; - Fragman = derive2 { name="Fragman"; version="1.0.7"; sha256="0dh1gk2arj7r6zd5dhkmxpr7a1hd3pl8x5klmlsg4n6rwsx2p4v8"; depends=[]; }; + Fragman = derive2 { name="Fragman"; version="1.0.9"; sha256="03vmvmnyza4i46v1awkdjz6ccbsiq49dm0mlmwsm801rq6yfihgp"; depends=[]; }; Frames2 = derive2 { name="Frames2"; version="0.2.1"; sha256="0xbz19v5r1h15p8mf94vacw04h3kvmm88ayy4b1aqxrd925n63mw"; depends=[MASS nnet sampling]; }; - FreeSortR = derive2 { name="FreeSortR"; version="1.2"; sha256="01h29p9qhlkd2qmmmw23wh9lrsggvp1h3r2laqi2lln7d7srcwbj"; depends=[ellipse smacof vegan]; }; + FreeSortR = derive2 { name="FreeSortR"; version="1.3"; sha256="1m6ahhixbbizzn09pz71zvinrdshn3j6gmy05jdxa9d932agqk0w"; depends=[ellipse smacof vegan]; }; FreqProf = derive2 { name="FreqProf"; version="0.0.1"; sha256="1yqn2435l2sghfcv5mma0rv9yqvpa69z8cqqsjlrlbih9gib82d4"; depends=[ggplot2 reshape2 shiny]; }; - FunChisq = derive2 { name="FunChisq"; version="2.4.3"; sha256="1wy76ich0bibf4938m97iww8zilgycha8351ryc3fqid0v78xzvg"; depends=[BH Rcpp]; }; + FunChisq = derive2 { name="FunChisq"; version="2.4.4"; sha256="0wcxs70xkp2dlk3vrp4jw1vvjivdyv1q4iinmavvzhxhf3qpv1am"; depends=[BH Rcpp]; }; FunCluster = derive2 { name="FunCluster"; version="1.09"; sha256="0i73asn1w4s6ydf2ddn5wpr0mwbbxzgmaly1pslarzkx71wk03fz"; depends=[cluster Hmisc]; }; FuncMap = derive2 { name="FuncMap"; version="1.0.8"; sha256="04rfmdy1hzxqy16csj6cf3x2kj9lg1xxvvnn494xjdwjdkfkyl09"; depends=[mvbutils]; }; Funclustering = derive2 { name="Funclustering"; version="1.0.1"; sha256="0i6g98mfgdyc9hdzvviynrgqhkzicp8y6s0scqy3ifgk9h1k79dw"; depends=[fda Rcpp RcppEigen]; }; @@ -1193,7 +1217,7 @@ in with self; { FuzzyAHP = derive2 { name="FuzzyAHP"; version="0.9.0"; sha256="02c08rzmmdd2l84jlzb0vck9m08afm7j599n0g09hffflcrb3fz7"; depends=[MASS]; }; FuzzyLP = derive2 { name="FuzzyLP"; version="0.1-5"; sha256="1achmsc107b26d266q0vmip8vi3qaa5z0p183z2fjdm7zh9ch6ag"; depends=[FuzzyNumbers ROI ROI_plugin_glpk]; }; FuzzyMCDM = derive2 { name="FuzzyMCDM"; version="1.1"; sha256="0ss0s65mm6j0nax4mb9g668d9n9cgl0l016mc3h9hbjxfpqrbkks"; depends=[RankAggreg]; }; - FuzzyNumbers = derive2 { name="FuzzyNumbers"; version="0.4-1"; sha256="15i0chp43y8xfyzkjrbljmdvgjjx9w1l5ayhvavk9y85pwb147b8"; depends=[]; }; + FuzzyNumbers = derive2 { name="FuzzyNumbers"; version="0.4-2"; sha256="0nvnz5df25slqdwnlw1fdv3xx9sz980x71805h8baw32ajg28a72"; depends=[]; }; FuzzyNumbers_Ext_2 = derive2 { name="FuzzyNumbers.Ext.2"; version="3.2"; sha256="0gldq0bg1p1vmrn35prha44d7lyymz0jzshdyp2c5rx433mny7h5"; depends=[FuzzyNumbers]; }; FuzzyR = derive2 { name="FuzzyR"; version="2.1"; sha256="08mhwzyksw0snxxcwn2kg62ya8smfvrls30znqhmnbkn5ijz0642"; depends=[plyr shiny]; }; FuzzyStatProb = derive2 { name="FuzzyStatProb"; version="2.0.3"; sha256="0ry2cr5ds7kd7vk6ihdg68gqs2rv6qfmzlszr33a9ia5gsbi8b7b"; depends=[DEoptim FuzzyNumbers MultinomialCI]; }; @@ -1202,7 +1226,6 @@ in with self; { G1DBN = derive2 { name="G1DBN"; version="3.1.1"; sha256="015rw3bpz32a8254janddgg1ip947qgcvmiwx5r3v7g8n854bwxn"; depends=[igraph MASS]; }; G2Sd = derive2 { name="G2Sd"; version="2.1.5"; sha256="165i6x2k56vwhk5p2p5m9vjmp9flblsapjdlz7nw9b719l6xz5zk"; depends=[ggplot2 reshape2 rJava shiny xlsx xlsxjars]; }; GA = derive2 { name="GA"; version="3.0.2"; sha256="0jpgbniyxvilnr1jv6vmrfgnar3qczvq819xjb70inp5f41zd6wx"; depends=[foreach iterators]; }; - GA4Stratification = derive2 { name="GA4Stratification"; version="1.0"; sha256="0li23mrxjx72fir16j3q06fa32cicck4pfc30n0dy2lysf81m9gs"; depends=[]; }; GABi = derive2 { name="GABi"; version="0.1"; sha256="1zmiaqbd1jrpiz9hk16s8rggcpl3xyyhjkkdliymx2p42vy5b5mf"; depends=[hash]; }; GAD = derive2 { name="GAD"; version="1.1.1"; sha256="0lyrw0d7i7yn1wkqlbf3rg3dnijfwsjn3kdbsg19hmvwq6qpsak2"; depends=[matrixStats R_methodsS3]; }; GADAG = derive2 { name="GADAG"; version="0.99.0"; sha256="1ycg48idrq2yrk1fxs16yl5wwg3kbfki8xppmh311rrzf75c6z4g"; depends=[igraph MASS Rcpp RcppArmadillo]; }; @@ -1213,7 +1236,7 @@ in with self; { GANPA = derive2 { name="GANPA"; version="1.0"; sha256="0ia8djv46jm397nxjrm9yc5gacf1r4z0ckiliz57cbrqwh7z2wpa"; depends=[GANPAdata]; }; GANPAdata = derive2 { name="GANPAdata"; version="1.0"; sha256="0mhdadl7zgsacn59ym42magg3214k1xhabwn78fv7kgccszcgc86"; depends=[]; }; GAR = derive2 { name="GAR"; version="1.1"; sha256="12xgk87bndinx7ibaasn51a9fad3ymvpjmixa7l18pfy99l3pcll"; depends=[httr jsonlite]; }; - GAS = derive2 { name="GAS"; version="0.2.5"; sha256="037jwsqrms6mclg85hc30xw5fgalfzswc67lv4bz012ds7f2i171"; depends=[MASS numDeriv Rcpp RcppArmadillo Rsolnp xts zoo]; }; + GAS = derive2 { name="GAS"; version="0.2.6"; sha256="18a3hagwfy0xa7abkwgf2pk5l2n0bxg4kr8y0m5iapkbc3gx5rvz"; depends=[MASS numDeriv Rcpp RcppArmadillo Rsolnp xts zoo]; }; GAabbreviate = derive2 { name="GAabbreviate"; version="1.3"; sha256="0cq6bg3w0ji44rsz1p4j17fk0jg8rafbjixwi3fjdndc3yd874r5"; depends=[GA psych]; }; GAparsimony = derive2 { name="GAparsimony"; version="0.9-1"; sha256="1j8r56pri7h0xr0fiihkwgccjb33n89lz8ah5p42bak7ay9fglkm"; depends=[foreach iterators]; }; GB2 = derive2 { name="GB2"; version="2.1"; sha256="06rcck97pdm1rsb02cy0jd9fknv0mz5jwk364gsaahdk56ddk18a"; depends=[cubature hypergeo laeken numDeriv survey]; }; @@ -1221,38 +1244,41 @@ in with self; { GCAI_bias = derive2 { name="GCAI.bias"; version="1.0"; sha256="10092mwpmfbcga0n39a0i6g8xxch8xiwg15cckipw6yxjyx0sivc"; depends=[]; }; GCD = derive2 { name="GCD"; version="3.0.5"; sha256="1ami5xw5xx464pxr9y1z9bb3dvj46vx3wrbh19w4g7sk8yjvh5nl"; depends=[]; }; GCPM = derive2 { name="GCPM"; version="1.2.2"; sha256="0k2ng78bk3bxpj6nz80j5cvjd56zjz328ga68vyyc3hvdjgpspqj"; depends=[Rcpp RcppProgress]; }; - GCalignR = derive2 { name="GCalignR"; version="1.0.0"; sha256="09qwxl39csrljkbfn3n0fxzypslhjzf10p61p0qmqkc9shh4yk6c"; depends=[ggplot2 pbapply readr reshape2 stringr]; }; + GCalignR = derive2 { name="GCalignR"; version="1.0.1"; sha256="1p1zxf5s75ckyj7a61n43ix314p3b99knyg6z5d4sn5n417h2m42"; depends=[ggplot2 pbapply readr reshape2 stringr]; }; + GD = derive2 { name="GD"; version="1.1"; sha256="1gl2d04xlpn31940z75zbcnv6a3bdcc37bl4yq6hqph4snxbnbgk"; depends=[BAMMtools ggplot2]; }; GDAdata = derive2 { name="GDAdata"; version="0.93"; sha256="13ks97i289rc4i7gpqrifwbj0m9rx8csjhnfg8mad10qmjwz7p8b"; depends=[]; }; GDAtools = derive2 { name="GDAtools"; version="1.4"; sha256="1i5g7gzl3fkhwxqizqwrn8098s5lrr0mk17wmpyf92s1sy315cpv"; depends=[FactoMineR nleqslv nnet]; }; GDELTtools = derive2 { name="GDELTtools"; version="1.2"; sha256="1rx6kjh7kmyycqapvbizcxkcfp09qvqv7k8f25v333sxkacpz6p5"; depends=[plyr TimeWarp]; }; GDINA = derive2 { name="GDINA"; version="1.4.2"; sha256="14686mkyxk7gjp0ivz1wkmry15qrf50fcwwza1j98791yjkqsbyf"; depends=[alabama data_table ggplot2 MASS nloptr numDeriv Rcpp RcppArmadillo Rsolnp]; }; GEEaSPU = derive2 { name="GEEaSPU"; version="1.0.2"; sha256="02pwjqd94kranc1f69bx9rzk27kchavhvhl9fygjhrr40nwq3pbg"; depends=[gee Rcpp RcppArmadillo]; }; GEEmediate = derive2 { name="GEEmediate"; version="1.1.1"; sha256="1akgl4j38x4qf3z9d6z7cgjd7x9f0k3lrzyrzgykqhrzmbh68z2m"; depends=[gee]; }; - GENEAclassify = derive2 { name="GENEAclassify"; version="1.4.5"; sha256="1hrsdpfk0iz0agi3rms43fk0yjv5ys10awqfxgwz9r9qfgczkh7j"; depends=[changepoint GENEAread MASS rpart signal]; }; + GENEAclassify = derive2 { name="GENEAclassify"; version="1.4.9"; sha256="1imq71nhr0bc08w8jvw57fvghczn1p3vb1n7xnk7i7n6aq23dzsx"; depends=[changepoint GENEAread MASS rpart signal]; }; GENEAread = derive2 { name="GENEAread"; version="1.1.1"; sha256="0c3d76yl8dqclk8zhhgrd6bv6b599vkpbyg3hjspb6npdw6zs6k8"; depends=[bitops]; }; + GENEAsphere = derive2 { name="GENEAsphere"; version="1.4"; sha256="0z6qazcgjcs03zz26167dxg6mgjaq1z0qdsa4ggh32813l4k0ijw"; depends=[GENEAread ggplot2 MASS misc3d rgl]; }; GENLIB = derive2 { name="GENLIB"; version="1.0.4"; sha256="1gl8qsgm9iy57rlajgc47lfxah52jsg7lpj131a6813kj0c639l7"; depends=[bootstrap doParallel foreach kinship2 lattice Matrix quadprog Rcpp]; }; - GEOmap = derive2 { name="GEOmap"; version="2.4-0"; sha256="0jhzsp5f427r652mnaw3zg0vv13jaz11bfbbxppmxvya6k2jimyg"; depends=[fields MBA RPMG splancs]; }; + GEOmap = derive2 { name="GEOmap"; version="2.4-4"; sha256="0wk2v0fwcwcm59k711fg829h2w58wkd36im4mg974iai6mqif7qh"; depends=[fields MBA RPMG splancs]; }; GERGM = derive2 { name="GERGM"; version="0.11.2"; sha256="0vvvbb7y5lqa60n7w14gm8r7gwgah593w63162amjxmdk9jir9bi"; depends=[BH coda ggplot2 igraph matrixcalc plyr Rcpp RcppArmadillo RcppParallel scales slackr stringr vegan]; }; GESE = derive2 { name="GESE"; version="2.0.1"; sha256="0h3s2sbnv5wilr2mj6bnl2892p16pxrs341gg6jql1a540p669sk"; depends=[kinship2]; }; GESTr = derive2 { name="GESTr"; version="0.1"; sha256="1q12l2vcq6bcyybnknrmfbm6rpzcmxgq2vyj33xwhkmm9g2ii9k6"; depends=[gtools mclust]; }; GEVStableGarch = derive2 { name="GEVStableGarch"; version="1.1"; sha256="1iypv0k4cbvsdyglgvf7y52sqvl5qcin627pjqwq42kisqynm8d7"; depends=[fExtremes fGarch Rsolnp skewt stabledist timeDate timeSeries]; }; - GEVcdn = derive2 { name="GEVcdn"; version="1.1.5"; sha256="0nqym5jqgshx6ad4k4nwain6lnhx5y7s3b10f2xmcn93287p3rji"; depends=[VGAM]; }; + GEVcdn = derive2 { name="GEVcdn"; version="1.1.6"; sha256="09lzhh16r1hsxa23jkq716yf3x9ap6fkkrz3ij2x83rvwznj8hb3"; depends=[VGAM]; }; GEint = derive2 { name="GEint"; version="0.1.4"; sha256="0xwp8hqds4lf6nb8hcbvsj2000w7f90bi62b1v3iry0y6cbpwbjg"; depends=[bindata geepack mvtnorm nleqslv pracma rje speedglm]; }; GExMap = derive2 { name="GExMap"; version="1.1.3"; sha256="1a6i2z9ndgia4v96nkr77cjqnbgxigqbqlibg82gwa0a6pl7r7nz"; depends=[Biobase multtest]; }; GFA = derive2 { name="GFA"; version="1.0.3"; sha256="10sivsqxliwcrp0ay3n2my28zki6f8vpv8i9lbld8qinx1iv2mq3"; depends=[]; }; - GFD = derive2 { name="GFD"; version="0.2.4"; sha256="10ijin08saamr0i2hcp0gjh372q2w30s0dia1bi9zxlwna1h9hxp"; depends=[magic MASS Matrix plotrix plyr]; }; + GFD = derive2 { name="GFD"; version="0.2.5"; sha256="14bhqk5hi9w2078nn382ksgw37bx5r1jadizcrwbisglccxa0ncd"; depends=[magic MASS Matrix plotrix plyr]; }; GFGM_copula = derive2 { name="GFGM.copula"; version="1.0.1"; sha256="1p7nklc9n5g7qbms8kbg08mp7zvgd4f58h7sa13571mmwbw3xmwd"; depends=[cmprsk joint_Cox]; }; GGEBiplotGUI = derive2 { name="GGEBiplotGUI"; version="1.0-9"; sha256="0nd0ky3m1avy82z48g7hcysq0y0agxjxdn0g624dkm2w99avxw3j"; depends=[rgl tkrplot]; }; GGEBiplots = derive2 { name="GGEBiplots"; version="0.1.1"; sha256="1xnxaylikjd378flw3rqw36z27b2limkmyad97zhf1cbva317d1b"; depends=[gge GGEBiplotGUI ggforce ggplot2 scales]; }; - GGIR = derive2 { name="GGIR"; version="1.5-12"; sha256="1n8xckhv3x9clphp696clqzcvc5z4v9npw1y69dfk6m1f29gcik4"; depends=[data_table Rcpp]; }; + GGIR = derive2 { name="GGIR"; version="1.5-17"; sha256="0p452p9xcbd0r9w2aqdiw4i740xxxbgi9hk4k5xqifdlkfg4gvmb"; depends=[data_table Rcpp]; }; GGMridge = derive2 { name="GGMridge"; version="1.1"; sha256="0zbfvvp7l836m118m8nmdvw1w7xq6d3b7qirskjsq1dkk23j41hs"; depends=[MASS mvtnorm]; }; - GGMselect = derive2 { name="GGMselect"; version="0.1-12"; sha256="1vjzmnnvnckr8s0badqm3l15arsa31fwg4wq6c2wx3g0hi1nzxxs"; depends=[gtools lars mvtnorm]; }; + GGMselect = derive2 { name="GGMselect"; version="0.1-12.1"; sha256="0nrkbai9jps54ldx3cvwd4x4wingfj73najwx4bv98z8zxpbnky5"; depends=[gtools lars mvtnorm]; }; + GGUM = derive2 { name="GGUM"; version="0.3.1"; sha256="1dgnhg0ggnp3f8qwzrcnapwzaraddnk2xsksin6pzybz21hfdvxd"; depends=[abind psych Rdpack viridis xlsx]; }; GGally = derive2 { name="GGally"; version="1.3.2"; sha256="02px7j28wzbhcgcwm2m0pxb6g7s5zvphl64ix55pkvag4m2ky57l"; depends=[ggplot2 gtable plyr progress RColorBrewer reshape]; }; GHQp = derive2 { name="GHQp"; version="1.0"; sha256="0qpcpwv7rz67qhz1p5k2im02jvs7l8z9sa6ypz13hig5fzm8j9bp"; depends=[statmod]; }; GHap = derive2 { name="GHap"; version="1.2.2"; sha256="1qwv4llcixklr9d6lq4ljzbs8al80xnvqkcajnh8dbf3axmlmr5b"; depends=[bigmemory lme4 Matrix]; }; GIGrvg = derive2 { name="GIGrvg"; version="0.5"; sha256="0mx4n4kf34343yiww80fw5yy0x624xsj71n8fr4dm0a2338pxq8v"; depends=[]; }; GISTools = derive2 { name="GISTools"; version="0.7-4"; sha256="06alb5d2k4qj344i9cpgm3lz9m68rkmjqfx5k2hzn7z458xjrlxs"; depends=[maptools MASS RColorBrewer rgeos sp]; }; - GJRM = derive2 { name="GJRM"; version="0.1-3"; sha256="11p1szc523z2fcglvllr22agigxwl6gypv04yb4i87zf43k5w5ri"; depends=[copula gamlss_dist ggplot2 magic matrixStats mgcv mnormt psych Rmpfr scam survey survival trust VGAM VineCopula]; }; + GJRM = derive2 { name="GJRM"; version="0.1-4"; sha256="1bx2amhrrsghh6s6115z3qajkvnrrk1kjscx4x05ybw1b4pqyy28"; depends=[copula gamlss_dist ggplot2 magic matrixStats mgcv mnormt psych Rmpfr scam survey survival trust VGAM VineCopula]; }; GK2011 = derive2 { name="GK2011"; version="0.1.3"; sha256="13vafhbgcsj485f12qv962y07v3hil3pla51vkl2b030amzy86jv"; depends=[]; }; GLDEX = derive2 { name="GLDEX"; version="2.0.0.5"; sha256="0mr8qhccp8dndp43v8ym22f4djrjr8qcxbv61lwabk2462llwln6"; depends=[cluster]; }; GLDreg = derive2 { name="GLDreg"; version="1.0.7"; sha256="1wjrr4x1k0fz8nx9idb4ysamldypriiypj96b5v028lx38jwsk3l"; depends=[ddst GLDEX]; }; @@ -1260,7 +1286,7 @@ in with self; { GLMMRR = derive2 { name="GLMMRR"; version="0.2.0"; sha256="0s3jfh720acfmbadilq2c6gql3yifsbijpmw1jkzbsdc87pqi1db"; depends=[lattice lme4]; }; GLMaSPU = derive2 { name="GLMaSPU"; version="1.0"; sha256="0zx2bza5v5cfp9v7hf42s57522b6prawcwl77aa3kvjcnb0ish6g"; depends=[MASS mnormt mvtnorm Rcpp RcppArmadillo]; }; GLSME = derive2 { name="GLSME"; version="1.0.3"; sha256="0flja5gk25k4z9hwskvdw4c1f88scc47xvc1l3d2447fkfrb0bwc"; depends=[corpcor mvtnorm]; }; - GMAC = derive2 { name="GMAC"; version="2.0"; sha256="13g2qgr5pq19w89jl2xpavl8kx8x6mnj6dj82cgj7yjg3a4r0700"; depends=[qvalue]; }; + GMAC = derive2 { name="GMAC"; version="3.0"; sha256="0c2cfpr8dik7j5br87hkvswrhqzj5vcna54gw6ffdf1rk9rz9j22"; depends=[]; }; GMCM = derive2 { name="GMCM"; version="1.2.4"; sha256="1y0yr6i4l28qw22drca7r4mzqjfbpm3jdssfb7p8pc664g6vmm81"; depends=[Rcpp RcppArmadillo]; }; GMD = derive2 { name="GMD"; version="0.3.3"; sha256="0hdya8ai210wxnkfra9bzyswk3gib5fm53fs61rh0nsmg3ysdga6"; depends=[gplots]; }; GMDH = derive2 { name="GMDH"; version="1.6"; sha256="093glyz73246m5f2xb2xgbgi80haj4fanmr325byr99dnf4x35yn"; depends=[MASS]; }; @@ -1273,14 +1299,16 @@ in with self; { GPArotation = derive2 { name="GPArotation"; version="2014.11-1"; sha256="15jh5qqqwx47ara6glilzha87rnih0hs5fsz0jjqwv6wr1gw26rm"; depends=[]; }; GPB = derive2 { name="GPB"; version="1.0"; sha256="18cdgz00j0j1rchzn2l253rii3b0iv9ipnh5sk3yvmwrqiabmrf8"; depends=[]; }; GPC = derive2 { name="GPC"; version="0.1"; sha256="1naqy5g6a0z65wssfic5s7cw9v0zjckk526nian3l98ci22sz0j7"; depends=[ks lars orthopolynom randtoolbox]; }; + GPCMlasso = derive2 { name="GPCMlasso"; version="0.1-1"; sha256="1qlbs9xxdn7q90afh5zc6fgp213fxyh3xmmhz5dm6azbwx92x3la"; depends=[car caret cubature ltm mirt mvtnorm Rcpp RcppArmadillo statmod TeachingDemos wordcloud]; }; GPCSIV = derive2 { name="GPCSIV"; version="0.1.0"; sha256="118l792mwd54xsi3g8afg3vc6wds8j6fyaz3mwmq04mlcyblym4l"; depends=[scatterplot3d sqldf]; }; GPFDA = derive2 { name="GPFDA"; version="2.2"; sha256="1xqk03g8b8hi1vdqh6a9wml8ln0ad6lmy14z8k8c4wdc5kbzdr0b"; depends=[fda fda_usc MASS spam]; }; GPGame = derive2 { name="GPGame"; version="1.0.0"; sha256="1ln3smlhr0hz5nkbdfhrpvz6cn0jz21w8p0d3xlcv4szlmkx8lx6"; depends=[DiceDesign DiceKriging emoa GPareto KrigInv MASS mnormt mvtnorm Rcpp]; }; GPLTR = derive2 { name="GPLTR"; version="1.2"; sha256="0b4s090jlp2qpqqr0b1ifwyf2fal156y7vg9mjkw53y623ms5pix"; depends=[rpart]; }; + GPM = derive2 { name="GPM"; version="1.0"; sha256="0k2mglgmq1hb0x9gdypvzgi7s3vkdpf6qcvgyd4qc3mfg3avbnmk"; depends=[lattice lhs randtoolbox]; }; GPPFourier = derive2 { name="GPPFourier"; version="2.1"; sha256="1wlzpiqlg5zx3rv29l1ql3apcaykvk72zc0anwxr152qlk910l2q"; depends=[mFilter Tides]; }; - GPareto = derive2 { name="GPareto"; version="1.1.0"; sha256="0y4jskrbsv7apc5blchnzgd2mfphvrpc03qgbgyvnzpc0yq18vmh"; depends=[DiceDesign DiceKriging emoa KrigInv ks MASS pbivnorm pso randtoolbox Rcpp rgenoud]; }; + GPareto = derive2 { name="GPareto"; version="1.1.1"; sha256="100r7v7vdkd8i8asb8fnz86rgmkd9kd5bnrc7kdzndfg6jsyycrg"; depends=[DiceDesign DiceKriging emoa KrigInv ks MASS pbivnorm pso randtoolbox Rcpp rgenoud rgl]; }; GPfit = derive2 { name="GPfit"; version="1.0-0"; sha256="0g0g343ncqsqh88qq9qrf4xv5n3sa980kqbvklcx534dmn6a7n2i"; depends=[lattice lhs]; }; - GPoM = derive2 { name="GPoM"; version="1.0"; sha256="14h9g2rg5yzw68hg2a3s2lp19ilq7dl1k3cjnd9k516b5gdm2izl"; depends=[deSolve rgl]; }; + GPoM = derive2 { name="GPoM"; version="1.1"; sha256="0n1fnmwiygispihqgcx762wkvp28pnm8kcwlx9vxhpafswsp112q"; depends=[deSolve rgl]; }; GPrank = derive2 { name="GPrank"; version="0.1.2"; sha256="0z9xhydnq04p872zl7glxhndmijjihfgffl6bijc9a0rs95zaacd"; depends=[gptk matrixStats RColorBrewer tigreBrowserWriter]; }; GPseq = derive2 { name="GPseq"; version="0.5"; sha256="0k5xif44qk2ppvcyja16xshmfciq1h84l1w6d8dfkyryfajbc8ai"; depends=[]; }; GPvam = derive2 { name="GPvam"; version="3.0-4"; sha256="1vqvm9647jnw91vpf4dhjjp9rc05n5k6qgzilfpmcg4a7zzi917k"; depends=[Matrix numDeriv Rcpp RcppArmadillo]; }; @@ -1288,7 +1316,7 @@ in with self; { GRAPE = derive2 { name="GRAPE"; version="0.1.0"; sha256="0kcyz8x6yzq83hcwdlx7yw5jpww819f9d1hax19vn31ccq71xkyw"; depends=[]; }; GRCdata = derive2 { name="GRCdata"; version="1.0"; sha256="0nshii6kfvffncgcrmm7wvniq94j9djj84jikcb6ck49viikkrky"; depends=[cubature nloptr]; }; GROAN = derive2 { name="GROAN"; version="1.1.0"; sha256="06xcbdcg3rmb9939d9ansy75jn0axy0c36rmgjhcji8gf959kmyz"; depends=[plyr rrBLUP]; }; - GRS_test = derive2 { name="GRS.test"; version="1.0"; sha256="1igyb3rma1v2arx1k16fanvzmlywx0n9lf5jz69vnf6z2qmqvrg5"; depends=[]; }; + GRS_test = derive2 { name="GRS.test"; version="1.1"; sha256="1ap9453rj5zan6c3ix7jb1qxhxh42bfv295dgqbgjpdygjdlbm6n"; depends=[]; }; GRTo = derive2 { name="GRTo"; version="1.3"; sha256="1xkcx2agvrpfnmplgaqx70vz303v8rhwnxdyr4hmdlf4h92lbv8i"; depends=[bootstrap]; }; GRaF = derive2 { name="GRaF"; version="0.1-12"; sha256="1d7mr2z49v6ch4jbzh0dj2yjy2c5p51ws38xfz233sjz475snajr"; depends=[dismo]; }; GSA = derive2 { name="GSA"; version="1.03"; sha256="1h1sbpn1rrdh44w4fx2avc7x24ba40mvpd8b2x5wfrc7a294zf6z"; depends=[]; }; @@ -1300,7 +1328,7 @@ in with self; { GSIF = derive2 { name="GSIF"; version="0.5-4"; sha256="1vh3dffi5hakk32rwaabw9k34wigd0n5bhzcyqhadl6fxjsaz6b6"; depends=[aqp dismo gstat plotKML plyr raster rgdal RSAGA scales sp]; }; GSM = derive2 { name="GSM"; version="1.3.2"; sha256="04xjs9w4gaszwzxmsr7657ry2ywa9pvpwpczpvinxi8vpj347jbb"; depends=[gtools]; }; GSMX = derive2 { name="GSMX"; version="1.3"; sha256="1n1d7rixj14ari46snsmi48qfmy00ihmzvayk3hkrp2d2d0xi2gh"; depends=[MASS]; }; - GSODR = derive2 { name="GSODR"; version="1.1.1"; sha256="06asmqkkr6kck2mg9iaacgkc5wyyl37p3hc9cmrr5smiqc1jbhgk"; depends=[curl dplyr magrittr purrr R_utils readr rgdal rlang sp tibble]; }; + GSODR = derive2 { name="GSODR"; version="1.1.2"; sha256="1zr19zik2ic38wg71gk9iapzmdh4z426djy8w4z25v148940liss"; depends=[curl dplyr magrittr purrr R_utils readr rgdal rlang sp tibble]; }; GSSE = derive2 { name="GSSE"; version="0.1"; sha256="034mmxa6kjq5kgikhb5q75viagz5ck9irrjbxm26zq9099qxm13b"; depends=[Iso zoo]; }; GSparO = derive2 { name="GSparO"; version="1.0"; sha256="0xna2crxqwy8fj0s79rxbdcaz9x912rp1vdwqv1557fsnmfv2yf0"; depends=[ggplot2 ThreeWay]; }; GUIDE = derive2 { name="GUIDE"; version="1.2.3.1"; sha256="02chn2mzh6smmiv8rp00cq5rff18bqszazbk8svmvvlgn0a25pj4"; depends=[rpanel tkrplot]; }; @@ -1308,21 +1336,22 @@ in with self; { GUIProfiler = derive2 { name="GUIProfiler"; version="2.0.1"; sha256="10m4d7f2rhw6cmkrnw3jh4iqlkfphf4v7mpfwzw17laq0ncmsx5r"; depends=[graph MASS Nozzle_R1 proftools Rgraphviz rstudioapi]; }; GUIgems = derive2 { name="GUIgems"; version="0.1"; sha256="0lmx8hw0496vk437p32l933cdb4vpi94f4kz58x20jj07c20maz6"; depends=[ggplot2 igraph MASS msm plyr rpanel stringr]; }; GUTS = derive2 { name="GUTS"; version="1.0.4"; sha256="0mgvgi9vyd35gpm1sxk1pi5sx3nbwlbxqa7l0nazc1fq77fabai4"; depends=[Rcpp]; }; - GUniFrac = derive2 { name="GUniFrac"; version="1.0"; sha256="0xr68yv3h2lwn7sxy8l5p9g1z3q9hihg9jamsyl70jj9b2ic80jn"; depends=[ape vegan]; }; + GUniFrac = derive2 { name="GUniFrac"; version="1.1"; sha256="1vgij7c9b0afl5wzwcn0pjdvn8gqz2jxk5q0gchd9zk1qd10a1vl"; depends=[ape matrixStats vegan]; }; GWAF = derive2 { name="GWAF"; version="2.2"; sha256="11lk1dy24y1d0biihy2aypdvlx569lw1pfjs51m54rhgpwzkw6yd"; depends=[coxme geepack lme4]; }; GWASExactHW = derive2 { name="GWASExactHW"; version="1.01"; sha256="19qmk8h7kxmn9kzw0x4xns5p3qqz27xkqq4q6zmh4jzizd0fsl78"; depends=[]; }; - GWASinlps = derive2 { name="GWASinlps"; version="1.0"; sha256="1g3zzw1q3cflnr5f3383rzq2rycxvvf2nzgdhrwbaj7j9vvxxl51"; depends=[mombf]; }; + GWASinlps = derive2 { name="GWASinlps"; version="1.1"; sha256="1041yb5zn27a9srylmawj2kbkcsjz65x0apa413wyb32pz73l6ni"; depends=[horseshoe mombf]; }; GWG = derive2 { name="GWG"; version="1.0"; sha256="1va0cd229dhhi1lmrkpwapcm96hrdmxilrmba02xnl7ikhisw0my"; depends=[]; }; GWLelast = derive2 { name="GWLelast"; version="1.1"; sha256="0c3mcvmvxvgibja6rb8j2mhmmjny825wgvi1dw0pz8pq1kg1q0ay"; depends=[doParallel foreach geosphere glmnet sp spgwr]; }; GWRM = derive2 { name="GWRM"; version="2.1.0.3"; sha256="16ahlf1pbcpgha50a7ml2c336by50r287kihwshiazshifi5p3n3"; depends=[doParallel foreach]; }; - GWmodel = derive2 { name="GWmodel"; version="2.0-4"; sha256="1q4z715yi5rasmcxv1acy14sf18knk11cznqi481kxc4mhxl2ay2"; depends=[maptools Rcpp RcppArmadillo robustbase sp]; }; + GWSDAT = derive2 { name="GWSDAT"; version="3.0.0"; sha256="1nyvbaxfh2hp3nk1lw6aksq2cjj2w4qa1cy7vjkrisl2dz0nfi2z"; depends=[deldir geometry Kendall lattice MASS Matrix readxl rhandsontable sf shiny shinycssloaders shinydashboard shinyjs sm sp splancs zoo]; }; + GWmodel = derive2 { name="GWmodel"; version="2.0-5"; sha256="1v0a2fxs1nfm84vrggj1zmbij6kqzc5mgmqlvrh80hj3w87zpiry"; depends=[maptools Rcpp RcppArmadillo robustbase sp spdep]; }; GWsignif = derive2 { name="GWsignif"; version="1.2"; sha256="0bss5s3ijnlckz44p7jj49bn2r8nwqckpzwzcv0vci915q8jfsj2"; depends=[]; }; GaDiFPT = derive2 { name="GaDiFPT"; version="1.0"; sha256="15fnj1w30h0zdj032f3js0bbb1qlyk4b54a4aclykwzicqdgalkg"; depends=[]; }; GameTheory = derive2 { name="GameTheory"; version="2.7"; sha256="0vb7sjia5s58gw9zpkzddps8knxvbrz7fbi3m6digl8bf5vwhxxw"; depends=[combinat gtools ineq kappalab lpSolveAPI]; }; GameTheoryAllocation = derive2 { name="GameTheoryAllocation"; version="1.0"; sha256="0733vmyr0d9scjd5ixpnggr548snd7nj70knf5hbzc59nmbc5y11"; depends=[e1071 lpSolveAPI]; }; Gammareg = derive2 { name="Gammareg"; version="1.0"; sha256="1a5wibnbd8jg0v8577n1x9kc358qpd4jz7l8h7r541sdpprm6wb0"; depends=[]; }; GauPro = derive2 { name="GauPro"; version="0.2.2"; sha256="127agnhqbbavcf7sx0zq1c8ldh3w1d1iz5bpd1ixxkyaapmiq4qy"; depends=[lbfgs R6 Rcpp RcppArmadillo]; }; - GeDS = derive2 { name="GeDS"; version="0.1.2"; sha256="07661z90ck3b0wz8nh700qq3g11rspd846k1v8k3dwn7300lmxbb"; depends=[Matrix Rcpp Rmpfr]; }; + GeDS = derive2 { name="GeDS"; version="0.1.3"; sha256="1ddq4hnyl3m3s4cchccxiqphi742ljcm86zqpa01a5nrjbnr87x6"; depends=[Matrix Rcpp Rmpfr]; }; GeNetIt = derive2 { name="GeNetIt"; version="0.1-1"; sha256="1xjz22m4yn642m0bqa33w4m2rygpxjwg43c54lw168jck9zzgv1f"; depends=[nlme raster rgeos sp spatialEco spdep]; }; GenABEL = derive2 { name="GenABEL"; version="1.8-0"; sha256="0sd497qvik70iwv7wc8r50rhc5wx153pm8vif738wwqqp43chks3"; depends=[GenABEL_data MASS]; }; GenABEL_data = derive2 { name="GenABEL.data"; version="1.0.0"; sha256="0p66fb0gynjx3mnfvnlz45cbn6xf49gwx9mfyxf584xfcggxaa1c"; depends=[]; }; @@ -1332,7 +1361,7 @@ in with self; { GenForImp = derive2 { name="GenForImp"; version="1.0"; sha256="1wcvi52fclcm6kknbjh4r9bpkc2rg8nk6cddnf5j8zqbvrwf4k5x"; depends=[mvtnorm sn]; }; GenKern = derive2 { name="GenKern"; version="1.2-60"; sha256="12qmd9ydizl7h178ndn25i4xscjnrssl5k7bifwv94m0wrgj4x6c"; depends=[KernSmooth]; }; GenOrd = derive2 { name="GenOrd"; version="1.4.0"; sha256="17mfrj1fwj8mri1w0bl2pw1rqriidmd67i7gpn9v56g9dzw5rzms"; depends=[MASS Matrix mvtnorm]; }; - GenSA = derive2 { name="GenSA"; version="1.1.6"; sha256="1llhjhg39fd2pnm6kn8zjhw6kkg88wn7y3yizr8fna7qc3ixlcii"; depends=[]; }; + GenSA = derive2 { name="GenSA"; version="1.1.7"; sha256="03xqwxm7v7rnihx730a4p65dfwhjh4345r3d78y0qxxplk8d76cx"; depends=[]; }; GenWin = derive2 { name="GenWin"; version="0.1"; sha256="0jm537i4jn3azdpvd50y9p0fssfx2ym2n36d3zgnfd32gqckz3s4"; depends=[pspline]; }; GeneClusterNet = derive2 { name="GeneClusterNet"; version="1.0.1"; sha256="1xi4c041c4m39f9wb5fklgmhi6ng78iwzzqch5xk9hx5blq6zd4m"; depends=[G1DBN igraph MASS]; }; GeneCycle = derive2 { name="GeneCycle"; version="1.1.2"; sha256="1ghdzdddbv6cnxqd08amy4c4s5jsxa637r828ygffk6z76xjr6b6"; depends=[fdrtool longitudinal MASS]; }; @@ -1342,7 +1371,7 @@ in with self; { GeneReg = derive2 { name="GeneReg"; version="1.1.2"; sha256="081qc66mb17dwk886x9l2z4imklxnfs02yqql0ri9c47bpsga7wp"; depends=[igraph]; }; GeneralOaxaca = derive2 { name="GeneralOaxaca"; version="1.0"; sha256="19j5c5xr6mdb6pmih94wbjas4yh0dmsqfggg8clvdxkpwk0h338v"; depends=[boot]; }; GeneralizedHyperbolic = derive2 { name="GeneralizedHyperbolic"; version="0.8-1"; sha256="0rx07z5npawvsah2lhhkryzpj19sg0sl0w410gmff985ksdn285m"; depends=[DistributionUtils RUnit]; }; - GeneralizedUmatrix = derive2 { name="GeneralizedUmatrix"; version="0.9.5"; sha256="0jz89z5qs0r46bby5d1ki49dj9n71x6i42llzpjqv3832kywqp86"; depends=[ggplot2 Rcpp RcppArmadillo shiny shinyjs]; }; + GeneralizedUmatrix = derive2 { name="GeneralizedUmatrix"; version="1.0.0"; sha256="1r63ikfv5s1f3agl6i2ny84yzky0macxmknkavnzbn4sqb8cmrbd"; depends=[ggplot2 Rcpp RcppArmadillo]; }; GeneticSubsetter = derive2 { name="GeneticSubsetter"; version="0.8"; sha256="0bd4snv3dwabc7mknmd2rjmffj67xq535x0bycajhd83d1jhjars"; depends=[]; }; GenomicMating = derive2 { name="GenomicMating"; version="1.3"; sha256="1qnxr1dxw7xk6zncvql1lq4zba8vdfprhjgq56lzv1dckfddzfgc"; depends=[emoa Rcpp RcppArmadillo scatterplot3d]; }; GenomicTools = derive2 { name="GenomicTools"; version="0.2.6"; sha256="19illcfcm34vr90kh4cbdwf7k8hy700dlzylsaicv3h4xi7iydgs"; depends=[circlize data_table gMWT Rcpp RcppArmadillo snpStats stringr]; }; @@ -1352,14 +1381,14 @@ in with self; { GeoLight = derive2 { name="GeoLight"; version="2.0.0"; sha256="1i49hyj3f5rcw0s6j2csnfwc6mnp5zn44vxjnk05wdkpw6dpvx5i"; depends=[changepoint fields maps MASS]; }; GeoMongo = derive2 { name="GeoMongo"; version="1.0.1"; sha256="19wim724sgmxx9rd5yvmqdml0hppb92b8qvpl5zqrlnzxzm0ih5x"; depends=[data_table geojsonR R6 reticulate]; }; GeoRange = derive2 { name="GeoRange"; version="0.1.0"; sha256="0krj9570wkhdvpaqkq3nf0maglqd44mpwn4v1bymvgpk1i1wf5p3"; depends=[moments proj4 raster sp velociraptr]; }; - GeoXp = derive2 { name="GeoXp"; version="1.6.2"; sha256="18wdmdwb79ipdjdii068dz9f55b5ldxn95g5q6jcxsqwp0wldvw8"; depends=[KernSmooth quantreg rgeos rgl robustbase spdep splancs]; }; GeomComb = derive2 { name="GeomComb"; version="1.0"; sha256="05xb6m2ciszxd13yhqdkildh9nsq19ss8885ngj6ynvbchqkii7r"; depends=[forecast ForecastCombinations ggplot2 Matrix mtsdi psych]; }; GerminaR = derive2 { name="GerminaR"; version="1.2"; sha256="10x22xl3r93i5mc6w7m5mqm3z386dsffwrb8h9c1bznrnynnsy63"; depends=[agricolae assertthat dplyr DT ggplot2 gsheet gtools magrittr readxl shiny shinydashboard tibble tidyr]; }; + GetDFPData = derive2 { name="GetDFPData"; version="0.6"; sha256="19srfls3fmxbjhwhsc3r76n34ls8s5940d831j4n93f4lzq33wyp"; depends=[curl dplyr readr reshape2 stringr tibble xlsx XML]; }; GetHFData = derive2 { name="GetHFData"; version="1.5"; sha256="1lm2k37y86fn45hhvyswj60dql0m33kia0wirs3zc981s4nsxp0i"; depends=[curl dplyr lubridate RCurl readr stringr]; }; GetITRData = derive2 { name="GetITRData"; version="0.6"; sha256="0llsx4x6h2a89ka8q7jf8cx77f6v2knjm7sr16dqwsm91rzg3yc2"; depends=[BETS curl dplyr readr reshape2 stringr tibble xlsx XML]; }; GetLattesData = derive2 { name="GetLattesData"; version="0.9"; sha256="1rqhs8039m3ar76nail7gavw6678zs20r9dg98rp5igqx5jjys73"; depends=[curl dplyr readr stringdist stringr XML]; }; GetR = derive2 { name="GetR"; version="0.1"; sha256="1b2wirhz4nhvmf863czwb8z8b42ilsyjjrg9rc4nd9b7nz50bmjg"; depends=[party]; }; - GetTDData = derive2 { name="GetTDData"; version="1.3"; sha256="0x8hgpjk3ah5izr4da7xkazha5j737cq5y84qmjbsgaxn9jdmvj5"; depends=[bizdays curl RCurl readxl stringi stringr tidyr XML]; }; + GetTDData = derive2 { name="GetTDData"; version="1.3.1"; sha256="1a8f22nxs85g2zznh1ma37lmycypg8f7d5kdhyb5vrirvrpi5p05"; depends=[bizdays curl RCurl readxl stringi stringr tidyr XML]; }; GetoptLong = derive2 { name="GetoptLong"; version="0.1.6"; sha256="1d98gcvlvp9nz5lbnzr0kkpc2hbkx74hlhrnybqhg1gdwc3g09pm"; depends=[GlobalOptions rjson]; }; GiANT = derive2 { name="GiANT"; version="1.2"; sha256="0h9jx2vpgpzlinf6v9mxj260r22nlqml8xnd2jknw36j5imim57w"; depends=[]; }; GiNA = derive2 { name="GiNA"; version="1.0.1"; sha256="0his7wsgnggyv9526blxzxa1ni8hwq2ws64wkmha45nvvnm3dsiw"; depends=[doParallel EBImage foreach png]; }; @@ -1376,6 +1405,8 @@ in with self; { GoFKernel = derive2 { name="GoFKernel"; version="2.1-0"; sha256="17jd1dqwpki4mmzk695g25vvfwvkp4k7jhvw06dmdmn5j09hw373"; depends=[KernSmooth]; }; GofKmt = derive2 { name="GofKmt"; version="2.0"; sha256="0018ljzlj7nkf12g0sqa8iyq3j2bnj9la3fwblx9lbdn8nxgllhn"; depends=[Rsolnp]; }; GoodmanKruskal = derive2 { name="GoodmanKruskal"; version="0.0.2"; sha256="1qwarachkhc2yvjyxfcfbgjc1x9ni5xb7f93zviv8mz3c35bhs3b"; depends=[classInt corrplot]; }; + GoogleKnowledgeGraphR = derive2 { name="GoogleKnowledgeGraphR"; version="0.1.0"; sha256="1jxiq1s48skn43pydsw8s67hf70v9fhhw2drcx9vni3c3szs44qd"; depends=[curl jsonlite]; }; + GpGp = derive2 { name="GpGp"; version="0.1.0"; sha256="1z03fcpcjm7waxci4c0a233xs21l2ds3p993y3shp7snbplbrfgf"; depends=[FNN Rcpp]; }; Grace = derive2 { name="Grace"; version="0.5.3"; sha256="0r41zvgdd5rqm15axqqssik6plwy7snpgw8m32labkfn3f0pp7n0"; depends=[glmnet MASS scalreg]; }; GrammR = derive2 { name="GrammR"; version="1.1.0"; sha256="1rwvgznfxp7d3rzymyljj3pn3z3ggia1bhi4nvpgd79qd4cifi2g"; depends=[ape cluster GUniFrac gWidgets gWidgetsRGtk2 MASS rgl RGtk2]; }; GraphFactor = derive2 { name="GraphFactor"; version="1.1"; sha256="1jxibd2d5b6vlq27m9ppmm96wsnkqn4pz66n9pwdl8wg2v85npw5"; depends=[igraph]; }; @@ -1407,13 +1438,13 @@ in with self; { HDGLM = derive2 { name="HDGLM"; version="0.1"; sha256="0a5lnh3780lsczj8339sp97c5y64a2gsdf77i56fvpxpphq0dnf8"; depends=[]; }; HDInterval = derive2 { name="HDInterval"; version="0.1.3"; sha256="1zjddw8s6xc2gsz6285g3dzzarnhb77sra1dbxghgn2nrgn2y0i5"; depends=[]; }; HDMD = derive2 { name="HDMD"; version="1.2"; sha256="0na0z08fdf47ghfl2r3fp9qg5pi99kvp7liymwxym2wglkwl4chq"; depends=[MASS psych]; }; - HDPenReg = derive2 { name="HDPenReg"; version="0.93.1"; sha256="1av4x9xqf4y1qfdkh9f0msskj9fqimng1i9bdlgl2ycfn8a64cjp"; depends=[Matrix Rcpp rtkore]; }; + HDPenReg = derive2 { name="HDPenReg"; version="0.93.2"; sha256="0blmp7cwsklp8aqdcyyjmv419cgc7iz0pb4629y8slqw0zq2n6gm"; depends=[Matrix Rcpp rtkore]; }; HDclassif = derive2 { name="HDclassif"; version="2.0.2"; sha256="0gykjqqhrqz1x9xl867hxhrp197y3x4679zh9v84i1nd9yxlamah"; depends=[MASS rARPACK]; }; - HDoutliers = derive2 { name="HDoutliers"; version="0.15"; sha256="01ylj4wnhqy8931lkhdgx552kv1h7hl4ngkpqbnhq75amyh34c46"; depends=[FactoMineR FNN mclust]; }; + HDoutliers = derive2 { name="HDoutliers"; version="1.0"; sha256="0pby640bad0jcf1lkwg2g6flassb1pimnjm411c6x8rgvmiphc23"; depends=[FactoMineR FNN mclust]; }; HDtest = derive2 { name="HDtest"; version="0.1"; sha256="0vlwpx9l6r0izfcf9fgna72w39w64b95s3q527mapjb6a3676avg"; depends=[checkmate doParallel expm foreach MASS mvtnorm]; }; HDtweedie = derive2 { name="HDtweedie"; version="1.1"; sha256="14awd7sws0464f68f5xwnv1xvr0xflvx2z2zzcfj1csvk3af0zzj"; depends=[]; }; HEAT = derive2 { name="HEAT"; version="1.2"; sha256="1qifqd06ifl0f5l44mkxapnkwhpm0b82yq6dhfw4f8yhb27wd0z2"; depends=[]; }; - HEMDAG = derive2 { name="HEMDAG"; version="1.1.1"; sha256="152aii6ddrbhyj2z1x75vsr4c90bg85aq7vb2kmpz46h405n3bj8"; depends=[graph PerfMeas precrec preprocessCore RBGL]; }; + HEMDAG = derive2 { name="HEMDAG"; version="2.0.1"; sha256="1sdgcc1adf21zd6qy48wkvnfakgpx7c4f750hnp8vjpanlrizp1w"; depends=[graph PerfMeas precrec preprocessCore RBGL]; }; HGNChelper = derive2 { name="HGNChelper"; version="0.3.6"; sha256="1bm6zxwafbp65p6w4rk2y1bw7ig60br2mk75c4frdzqw3yw0zwxd"; depends=[]; }; HH = derive2 { name="HH"; version="3.1-34"; sha256="1srr195ha8n4va30impm12p2kamkl36whl8g10pl80hwgg20pbqk"; depends=[abind colorspace gridExtra Hmisc lattice latticeExtra leaps multcomp RColorBrewer reshape2 Rmpfr shiny vcd]; }; HHG = derive2 { name="HHG"; version="2.2"; sha256="114nfpdjdisryil9l8cws885qdskgrjm2cclx543hh4cdhpnkxnp"; depends=[Rcpp]; }; @@ -1429,24 +1460,24 @@ in with self; { HMDHFDplus = derive2 { name="HMDHFDplus"; version="1.1.8"; sha256="15z0war5isw9xnln7py3di8f45pwvdw6x6wljl18fcxpmanmlfcf"; depends=[RCurl XML]; }; HMM = derive2 { name="HMM"; version="1.0"; sha256="0z0hcqfixx1l2a6d3lpy5hmh0n4gjgs0jnck441akpp3vh37glzw"; depends=[]; }; HMMCont = derive2 { name="HMMCont"; version="1.0"; sha256="1drni4f72x83sprn65wnhw0pv1q8lfkgmxdr9h4rwv1accril85x"; depends=[]; }; + HMMEsolver = derive2 { name="HMMEsolver"; version="0.1.0"; sha256="19iwy0nj0vw3cslrfdai1l1yg84c5diyxpy65jd2f419ag3rmki3"; depends=[Rcpp RcppArmadillo Rdpack]; }; HMMoce = derive2 { name="HMMoce"; version="1.0.0"; sha256="0w2hrqjz75j9l6wimz9rsr8bwa5rvag0pavmyqkcb8jgqdgka8hx"; depends=[curl doParallel dplyr fields foreach imager locfit lubridate maptools raster RColorBrewer rgeos RNetCDF sp]; }; HMMpa = derive2 { name="HMMpa"; version="1.0"; sha256="14r2axg42by49qm6avgv7g3xnc29bxlrni5fhc5vdz0wygkcrqhn"; depends=[]; }; - HMP = derive2 { name="HMP"; version="1.5"; sha256="1jsvk0ban726qrf31gkq5c3gnyxvqv9jpcpk68md9xw3a2r3lxy6"; depends=[dirmult doParallel foreach ggplot2 gplots MASS rpart rpart_plot vegan]; }; + HMP = derive2 { name="HMP"; version="1.5.1"; sha256="0v32pkgr9rhpz77y18z356lc68hcncbszawwqsldwhwc8dvb3rwn"; depends=[dirmult doParallel foreach ggplot2 gplots lattice MASS rpart rpart_plot vegan]; }; HMPTrees = derive2 { name="HMPTrees"; version="1.4"; sha256="1jha64iyb0816rdg2i3z7i31z02r72k6acmvw0ibw3sli8zcvphb"; depends=[ape dirmult doParallel foreach HMP]; }; HMR = derive2 { name="HMR"; version="0.4.2"; sha256="0rbpghih99avaq803f6hb66pfbqgzh1i2yaqs0mhbj61yyjzyb7b"; depends=[]; }; HMVD = derive2 { name="HMVD"; version="1.0"; sha256="0agzvsl2n3zg3i519b93jqpiq9zix0bbrjdzk3ymsbb42dzkmj0d"; depends=[MASS]; }; HPbayes = derive2 { name="HPbayes"; version="0.1"; sha256="1kpqnv7ymf95sgb0ik7npc4qfkzc1zb483vwnjpba4f42jhf508y"; depends=[boot corpcor MASS mvtnorm numDeriv]; }; - HRM = derive2 { name="HRM"; version="0.7.4"; sha256="0q8g5s5n9442rnx3wkcpz054m3lwjiqaaik32n7x6a01igy13p66"; depends=[ggplot2 MASS matrixcalc plyr reshape2 xtable]; }; + HRM = derive2 { name="HRM"; version="0.8.0"; sha256="0p6m73l6i9psa3xh2l02c6r2f2wiysn5nharyryz0p50rz7ajhls"; depends=[ggplot2 MASS matrixcalc plyr reshape2 xtable]; }; HRQoL = derive2 { name="HRQoL"; version="1.0"; sha256="1gr9rhr8gdnh7bw2v3r0xc3yhmzrx2gzgsd8wd5mmsp81ph0h5lz"; depends=[car fmsb Matrix matrixcalc numDeriv RColorBrewer rootSolve]; }; HSAR = derive2 { name="HSAR"; version="0.4.2"; sha256="0rxb2klmyynr8rzq6ka8p40lw81wjd0jkw2wg3vg90zny0zps98j"; depends=[Rcpp RcppArmadillo spdep]; }; HSAUR = derive2 { name="HSAUR"; version="1.3-9"; sha256="0b2hyn59lr2pma87fcj7mli3qmrbnfhgd8fv02fa317rj52399qz"; depends=[]; }; HSAUR2 = derive2 { name="HSAUR2"; version="1.1-17"; sha256="0jc554lz5lj7180vd4rbrjkywar4bh38c7i9kyxhd5clg4afxpw8"; depends=[]; }; HSAUR3 = derive2 { name="HSAUR3"; version="1.0-8"; sha256="0s3m771l83psfwk6dqw2zf0vyvk5v2h730b5nwaky9xvgvp0mrms"; depends=[]; }; - HSROC = derive2 { name="HSROC"; version="2.1.8"; sha256="056g6iygrddmpmg5nnilqrlw2xavmcc9q07z942vc2nivw06h346"; depends=[coda lattice MASS MCMCpack]; }; HSSVD = derive2 { name="HSSVD"; version="1.2"; sha256="1k7ga397grl0r4p0ipjgw5xlafb2528rpww67bw7mmy01w87a1cc"; depends=[bcv]; }; HTMLUtils = derive2 { name="HTMLUtils"; version="0.1.7"; sha256="05y505jazzahnd6jsp3plqz8hd75991hhhcpcdn8093rinb1f8l1"; depends=[R2HTML]; }; HTSCluster = derive2 { name="HTSCluster"; version="2.0.8"; sha256="0wnbfh6hdx8692jilgmv8sys1zm6fqc6mim7vvjhyqlmpm8gm0kg"; depends=[capushe edgeR plotrix]; }; - HTSSIP = derive2 { name="HTSSIP"; version="1.3.0"; sha256="1lfsqh2wj4k8vm53g9m6y1jh5nxs8a49zh8q63mjb12nr5w01pb8"; depends=[ape coenocliner DESeq2 dplyr ggplot2 igraph lazyeval magrittr phyloseq plyr stringr tidyr vegan]; }; + HTSSIP = derive2 { name="HTSSIP"; version="1.3.2"; sha256="0y5xqpq55x1q4afs9qwn949y6f4f11fl9zxn2ffzv17zsia7b7xl"; depends=[ape coenocliner DESeq2 dplyr ggplot2 igraph lazyeval magrittr phyloseq plyr stringr tidyr vegan]; }; HUM = derive2 { name="HUM"; version="1.0"; sha256="1bq74l88jvscmq9ihv5wn06w2wng073ybvqb2bdx2dmiqlpv6jw2"; depends=[gtools Rcpp rgl]; }; HURDAT = derive2 { name="HURDAT"; version="0.1.0"; sha256="074c5spfsg4f3hg9f316wz72m2j3kvycl8hb4j7i7z62wswgi420"; depends=[dplyr lubridate magrittr purrr readr stringr tibble tidyr]; }; HW_pval = derive2 { name="HW.pval"; version="1.0"; sha256="14nmyqw2d9cmn64789yc54fmiqanh6n1dizp7vj94h7b0jwq63yy"; depends=[]; }; @@ -1460,7 +1491,7 @@ in with self; { HapEstXXR = derive2 { name="HapEstXXR"; version="0.1-8"; sha256="00p8pziy8q6vki7brpd57c7ckc9zw41c90h47yp9vb3ndanfqavp"; depends=[survival]; }; Haplin = derive2 { name="Haplin"; version="6.2.1"; sha256="13kix0skxk35zgwci1fwxkqm8bxbsxf5kid7qs88ib9pgix7qg41"; depends=[DatABEL GenABEL MASS mgcv snow SuppDists]; }; HaploSim = derive2 { name="HaploSim"; version="1.8.4"; sha256="0794f76hc9qvjmay7c61cmzycqafljs0g0hliq9xfrw4f23gq3sa"; depends=[]; }; - HardyWeinberg = derive2 { name="HardyWeinberg"; version="1.5.8"; sha256="0xbcchmzii0jv0ygr91n72r39j1axraxd2i607b56v4yd5d8sy4k"; depends=[mice Rcpp]; }; + HardyWeinberg = derive2 { name="HardyWeinberg"; version="1.5.9"; sha256="0qk3lly5qczn61rj0q9xzscppspvk238yjgr4p71pkzkjhiv40jz"; depends=[mice Rcpp Rsolnp]; }; HarmonicRegression = derive2 { name="HarmonicRegression"; version="1.0"; sha256="0inz3l610wl0ibqjyrhfbmwmcfzcmcfhixai4lpkbfsyx93z2i4d"; depends=[]; }; Harvest_Tree = derive2 { name="Harvest.Tree"; version="1.1"; sha256="021zmppy7p2iakaxirfjdb5jzakg1ijma9d25ly2ni0nx0p1mh6z"; depends=[rpart]; }; HelpersMG = derive2 { name="HelpersMG"; version="3.0.0"; sha256="1y5q4z9yxap16bkcjsybm2754wm0x31hfqdnp2bb4gbvhz1jhas6"; depends=[coda]; }; @@ -1476,11 +1507,11 @@ in with self; { HiddenMarkov = derive2 { name="HiddenMarkov"; version="1.8-11"; sha256="1yh85pdb9r90qxcl5gxslyplxzrx8knrrsl2q65l57zfkqj185ja"; depends=[]; }; HierO = derive2 { name="HierO"; version="0.2"; sha256="1lqj5grjly4kzxl7wb192aagz2kdvpnjdan2kcg5yxwvg1xcvwv1"; depends=[bitops RCurl rneos tcltk2 XML]; }; HighDimOut = derive2 { name="HighDimOut"; version="1.0.0"; sha256="0r7mazwq4fsz547d3nyavmqya7144lg3fkl5f7amrp48l9h85vx2"; depends=[DMwR FNN foreach ggplot2 plyr proxy]; }; - HistDAWass = derive2 { name="HistDAWass"; version="0.1.8"; sha256="1a87aimh5d7qp7j0hn2zgbcd7fk26sy79a4bq84q14zbc1gbsady"; depends=[class FactoMineR ggplot2 histogram Rcpp RcppArmadillo]; }; + HistDAWass = derive2 { name="HistDAWass"; version="1.0.0"; sha256="0si57vmgnkrhyilk3vv4189c093n6if6i5nv3jylvhpmbf5nvm7p"; depends=[class FactoMineR ggplot2 ggridges histogram Rcpp RcppArmadillo]; }; HistData = derive2 { name="HistData"; version="0.8-2"; sha256="0qd3a1v3xg39nwqfw63k6210vqkpknq0j3r36sy1910hn0nr83fa"; depends=[]; }; HistogramTools = derive2 { name="HistogramTools"; version="0.3.2"; sha256="1wkv6ypn006d8j6bpbhc1knw0bky4y8r7jp87482yd19q5ljsgv0"; depends=[ash Hmisc stringr]; }; HiveR = derive2 { name="HiveR"; version="0.3.42"; sha256="09h061511pk7iy1k9gb3ifa5q6gd17ix9sn2fshl6gp5sxnysn4f"; depends=[jpeg plyr png RColorBrewer rgl tkrgl]; }; - Hmisc = derive2 { name="Hmisc"; version="4.0-3"; sha256="1a7i7azag6pldgala85d8hh7wnx1shamyiriy4jfc65nxrr2lq8w"; depends=[acepack base64enc cluster data_table foreign Formula ggplot2 gridExtra gtable htmlTable htmltools lattice latticeExtra nnet rpart survival viridis]; }; + Hmisc = derive2 { name="Hmisc"; version="4.1-1"; sha256="160l50ppjs69ipcaya1mlcz29zbn5rmqg91r09dvzzvkvwfb47cr"; depends=[acepack base64enc cluster data_table foreign Formula ggplot2 gridExtra gtable htmlTable htmltools lattice latticeExtra nnet rpart survival viridis]; }; HoRM = derive2 { name="HoRM"; version="0.1.1"; sha256="0l0gcp1bagm7zbjg7hw2748aqjn9592531d0w5vjap0jgalaig32"; depends=[ggplot2 MASS orthopolynom quantmod rsm]; }; Holidays = derive2 { name="Holidays"; version="1.0-7"; sha256="1srfbhlrf0pd6gzhp4hbic555lb7camk084rn1qz2g7fjvyijqiq"; depends=[TimeWarp]; }; Homeric = derive2 { name="Homeric"; version="0.1-3"; sha256="1vcs8fj39zpz45p7gph0mnx65hgr35na0b79i8llyw7i1h7zqzxr"; depends=[]; }; @@ -1490,15 +1521,16 @@ in with self; { HyPhy = derive2 { name="HyPhy"; version="1.0"; sha256="0994ymv7sswbp8qw3pay34s926cflw2hq2gnchw7rknybvlsrinq"; depends=[ape R_utils]; }; HybridFS = derive2 { name="HybridFS"; version="0.1.2"; sha256="05skml3v2zm5hmd6slpmx3lfwi6x5wfgbx7cnhc6l077b11jpdd9"; depends=[caTools FSelector InformationValue ROCR woeBinning]; }; HybridMC = derive2 { name="HybridMC"; version="0.2"; sha256="1wgzfyk0scwq9s2sdmc91fj7r4d7zlgwgnj6mdiia8w88ja8kzqy"; depends=[coda]; }; - HydeNet = derive2 { name="HydeNet"; version="0.10.5"; sha256="00h7lj347nag5m5nfyv1hgaml77kqlcxrl704mq6791fcjdchgp1"; depends=[checkmate DiagrammeR dplyr graph gRbase magrittr nnet pixiedust plyr rjags stringr]; }; + HydeNet = derive2 { name="HydeNet"; version="0.10.7"; sha256="001ifh5ddg7q4rckhi662zd9a8milfi3v2gmgy76x0wq2xph7yrj"; depends=[checkmate DiagrammeR dplyr graph gRbase magrittr nnet pixiedust plyr rjags stringr]; }; HydroMe = derive2 { name="HydroMe"; version="2.0"; sha256="1a1d3lay94mzwk8n22l650h3p133npdf4aj63zgrdw4760p54rqf"; depends=[minpack_lm nlme]; }; HyperbolicDist = derive2 { name="HyperbolicDist"; version="0.6-2"; sha256="1wgqbx9ascyk6gw1dmvfz6hljvbh49gb9shr9qgf22qbq83waiva"; depends=[]; }; IAPWS95 = derive2 { name="IAPWS95"; version="1.0.0"; sha256="1rw6i3a653m11fyza42jhbqi6607fiqgmq15qfn5bqhq8sdgmn9p"; depends=[ggplot2 pander Rcpp]; }; IASD = derive2 { name="IASD"; version="1.1"; sha256="1slhd42k639mbyxccl7n69p7ng2qx6pqag8wz3kdwn479spkavzn"; depends=[]; }; IAT = derive2 { name="IAT"; version="0.3"; sha256="110rn2q09gspfd4msyh30dllxdxdraffkr18h1nm72brzhmx9cfi"; depends=[dplyr ggplot2 lazyeval]; }; - IATScore = derive2 { name="IATScore"; version="0.1.0"; sha256="1dlqazsg4vvflrqls1scmq3f6840d3dsplglfj3x0i8fh87q9ja0"; depends=[]; }; - IATscores = derive2 { name="IATscores"; version="0.1-2"; sha256="0grl5m4ccwaxvhg1bziy3vv5jffkvr24z268ws5m4ia20haif0dm"; depends=[dplyr nem qgraph reshape2 stringr]; }; + IATScore = derive2 { name="IATScore"; version="0.1.1"; sha256="0sg4apj1sp0xc311cbkvflhv9kw1jxvjhdr0xjw79s662mnhkhgz"; depends=[]; }; + IATscores = derive2 { name="IATscores"; version="0.2.1"; sha256="1nm07wlrnjx36wr3jbv2faayh1vrlfid124b27w9v0x0dk145i82"; depends=[dplyr qgraph reshape2 stringr]; }; IAbin = derive2 { name="IAbin"; version="1.0"; sha256="1cpj2mx72n4v0yd8jbbnhj2w5d0sc8pw7rc8ahnn1hfa38pwwsyx"; depends=[]; }; + IBCF_MTME = derive2 { name="IBCF.MTME"; version="1.1-2"; sha256="1vb8i1xck65135pnlqbyh6y2a5w9n7spvxzyzb7323x1mv161157"; depends=[lsa tidyr]; }; IBDLabels = derive2 { name="IBDLabels"; version="1.1"; sha256="1m9fd058yjxva6hin7i72i2nl285wfm0jkdn5xcng27yqlijyrm9"; depends=[]; }; IBDhaploRtools = derive2 { name="IBDhaploRtools"; version="1.8"; sha256="1754239pdil6b383mpzyi8zb9l9hzg15dwgn5246v97g1y3mlp5r"; depends=[]; }; IBDsim = derive2 { name="IBDsim"; version="0.9-7"; sha256="1wq0w9d4kwvq1hc5l0m8wrqfhnncapmnrh29x9vvafv50ym7yb3l"; depends=[paramlink]; }; @@ -1506,7 +1538,7 @@ in with self; { IBrokers = derive2 { name="IBrokers"; version="0.9-12"; sha256="0mhh4kgwrncrcysvnvah6xc7fhx5ywjzn258cs9xj9kzns0jblk6"; depends=[xts zoo]; }; IC2 = derive2 { name="IC2"; version="1.0-1"; sha256="03jjb62msxjxdg9l3zd1ns0d2w37hkxy5pnjgaywxw3vfk4zwfj9"; depends=[]; }; ICAFF = derive2 { name="ICAFF"; version="1.0.1"; sha256="0zazx4nv81s75appg10aayks04mx6m5n9yf5hqrbxh3yj68vzxfy"; depends=[]; }; - ICAOD = derive2 { name="ICAOD"; version="0.9.2"; sha256="12fkcc2ii3652n8ihzm29f9gip790wdmil7c1bzd5ma4l959w7hy"; depends=[nloptr Rcpp RcppEigen Rsolnp]; }; + ICAOD = derive2 { name="ICAOD"; version="0.9.6"; sha256="1c9zlskhsz5w1a5lkfcxclnsgxbvkgcgnbzvc3xk1mpa2zb2pvap"; depends=[cubature mnormt nloptr Rcpp RcppEigen sn]; }; ICBayes = derive2 { name="ICBayes"; version="1.1"; sha256="1bmxba3bv9szzxvjf1blwxwdhw87h7s04cfn63c1gqpnpwsmr03y"; depends=[coda HI survival]; }; ICC = derive2 { name="ICC"; version="2.3.0"; sha256="0y8zh9715cp9bglxpygqwgigrarq37sj845lk1xl0ydwinl0a6kk"; depends=[]; }; ICC_Sample_Size = derive2 { name="ICC.Sample.Size"; version="1.0"; sha256="1w6v1jp8bfvf6c49ikswkc5527gdx5cyqnw95x00pgmm6riwlsp9"; depends=[]; }; @@ -1519,9 +1551,10 @@ in with self; { ICRanks = derive2 { name="ICRanks"; version="1.3"; sha256="0n8gyqlwx38v2lfx7r49h43k2f4z4ml78x3lq0sc952n4rckzgiv"; depends=[multcomp Rcpp]; }; ICS = derive2 { name="ICS"; version="1.3-0"; sha256="0r5lf8km77h29lcpi7z0hkmy4vh0p5m7p2xbxsxj6w9hsgyanv72"; depends=[mvtnorm survey]; }; ICSNP = derive2 { name="ICSNP"; version="1.1-0"; sha256="1g7n8jlilg36hm989s5x18kf8jqn5wy98xi9jmnqkqpds4ff217y"; depends=[ICS mvtnorm]; }; - ICSOutlier = derive2 { name="ICSOutlier"; version="0.2-0"; sha256="1dxbh3qhirr7f2bv68g1xlya5fprm230fdgxhccrzdc0wh0ijh3i"; depends=[ICS moments mvtnorm]; }; + ICSOutlier = derive2 { name="ICSOutlier"; version="0.3-0"; sha256="1vj1y4zw8pkghkg4qnmx0yk1yw4zzl9075n5czrna9ckk2p29fmh"; depends=[ICS moments mvtnorm]; }; ICSShiny = derive2 { name="ICSShiny"; version="0.4"; sha256="02qcph5ax4gwz44zq8riv4yl4h0wdiwgxv7m96cpdh7gwfhwzgzr"; depends=[DT ICS ICSNP ICSOutlier rrcov shiny simsalapar]; }; ICV = derive2 { name="ICV"; version="1.0"; sha256="1na87i39jy5d8ibldqcqz3a072ihkgcl0k629sxch9hk6v6j5lly"; depends=[]; }; + ICcalib = derive2 { name="ICcalib"; version="1.0.7"; sha256="1p224srs1jakl7iyybcn9f6r9kcwxyrikdrfa9wjgkhz60pv88fs"; depends=[fitdistrplus icenReg ICsurv MASS msm numDeriv Rcpp RcppArmadillo survival]; }; ICsurv = derive2 { name="ICsurv"; version="1.0"; sha256="1mbndpy3x5731c9y955wscy76jrxlgv33bf6ldqp65cwyvdgxl86"; depends=[MASS matrixcalc]; }; ICtest = derive2 { name="ICtest"; version="0.3"; sha256="0g4h6gkz6zp28a1hvrvm89wckx6sg5fqzy0flb97a6lh9xpmb83g"; depends=[GGally ggplot2 ICS ICSNP JADE png Rcpp RcppArmadillo survey]; }; IDCard = derive2 { name="IDCard"; version="0.3.0"; sha256="06b5zqmgh4clni3mv6ab2a52r4z34isbz0hd1i61793gps9fkc0y"; depends=[stringr]; }; @@ -1547,30 +1580,31 @@ in with self; { IMak = derive2 { name="IMak"; version="1.1.2"; sha256="19si4hhvi8kddkp2kr1yw2bcw1qkk0i42saklvwk751gdmyzl9p3"; depends=[]; }; INCATome = derive2 { name="INCATome"; version="1.0"; sha256="1gbmcirs49ydmk5rg2vl5gdy39dfx9psw5mijibzjszcfjar3kqs"; depends=[genefilter limma multtest RankProd siggenes]; }; INLABMA = derive2 { name="INLABMA"; version="0.1-8"; sha256="13r89r14xpihfqddwzkhxg4jgxyl59826x2insrall3mj2yffj90"; depends=[Matrix sp spdep]; }; - INLAutils = derive2 { name="INLAutils"; version="0.0.4"; sha256="0bfqczwqyfdy343n3pa6pzard9wqzl382p1z42q6vclgx6h0h7rc"; depends=[assertthat ggfortify ggplot2 raster RColorBrewer reshape2 sp]; }; INSPIRE = derive2 { name="INSPIRE"; version="1.5"; sha256="0938l50yxnb5q628mp874ayx9ybvcjddis20y1hzm5cmlsg0hqhg"; depends=[missMDA]; }; IPEC = derive2 { name="IPEC"; version="0.0.9"; sha256="02nzh8yq6nshnljxlkqyvd9spnqbcxfdlcr2zl33syhgqjsaz34h"; depends=[MASS numDeriv]; }; IPMRF = derive2 { name="IPMRF"; version="1.2"; sha256="1zvwwhiy0p134zvm5ldc92pdd1ap72bhbrlf02rz9m2hlsxmwy67"; depends=[gbm party randomForest]; }; IPMpack = derive2 { name="IPMpack"; version="2.1"; sha256="08b79g5a9maxnxladvc2x2dgcmm427i8p6hhgda3mw2h5qmch2q3"; depends=[MASS Matrix nlme]; }; - IPSUR = derive2 { name="IPSUR"; version="1.5"; sha256="0brh3dx7m1rilvr1ig6vbi7p13bfbblgvs8fc114f08d90fczwnq"; depends=[]; }; IPWsurvival = derive2 { name="IPWsurvival"; version="0.5"; sha256="0lmw0ifj8cds8lzyjkkv0i0zim23p0a3pawlhmhdm3nfvwawb853"; depends=[survival]; }; IPtoCountry = derive2 { name="IPtoCountry"; version="0.0.1"; sha256="1b10z93mc31cr1c5wxp9xz9cr3jm4n4g5kav09dyallpgw60rskp"; depends=[data_table devtools dtables ggplot2 install_load maps scales]; }; IQCC = derive2 { name="IQCC"; version="0.7"; sha256="1zalpmyywkrnci0jd8irakjhiqmr52zhj1sbxf9pz5c7wks2rdbc"; depends=[MASS miscTools qcc]; }; IRATER = derive2 { name="IRATER"; version="0.0.1"; sha256="0jxdvjmnmangbqy3ibb5qrj9jz3wrzs0wa1r2gjk4v8vsbk0ipcf"; depends=[coda lattice plyr R2admb]; }; IRISMustangMetrics = derive2 { name="IRISMustangMetrics"; version="2.0.8"; sha256="0imsssija6v91il3dw5ibzm09xyjbabp2xy9jp4ixj6x8295i5xg"; depends=[dplyr IRISSeismic pracma RCurl seismicRoll signal stringr XML]; }; IRISSeismic = derive2 { name="IRISSeismic"; version="1.4.6"; sha256="1kccc4rbnyczdif7plvl3jfa3nfqfasybbbqmdkfiz0mhgvn1z4r"; depends=[pracma RCurl seismicRoll signal stringr XML]; }; + IROmiss = derive2 { name="IROmiss"; version="1.0.1"; sha256="01l08s1g7h8cki372daa61pw3wac3pbv5d4yqnphg5p8ihsmrc5d"; depends=[equSA huge mvtnorm ncvreg]; }; IRTShiny = derive2 { name="IRTShiny"; version="1.2"; sha256="094ax94y6k5z4vlxfla2w19f57q0z32nwwd5npjbgmnkhvfhhl9v"; depends=[beeswarm CTT ltm psych shiny shinyAce]; }; IRTpp = derive2 { name="IRTpp"; version="0.2.6.1"; sha256="10shzyiawk65pikawvhg58kx6fpvs1dazqmfjf3rfvly1lc0px1q"; depends=[FactoMineR MASS mvtnorm numDeriv Rcpp]; }; IRdisplay = derive2 { name="IRdisplay"; version="0.4.4"; sha256="19l4flvik8zw2pany8dpjbrh0bji6bag6pmclgwqnq80532hnfp8"; depends=[repr]; }; ISBF = derive2 { name="ISBF"; version="0.2.1"; sha256="12mk4d0m5rk4m5bskkkng5j6a9dzh8l1d74wh8lnamq7kf9ai9if"; depends=[]; }; ISDA_R = derive2 { name="ISDA.R"; version="1.0"; sha256="0w6p2iy6s7fy8pw2cf4b5zhqcgjjwd5bkax1aqflaaj4ppmfx64v"; depends=[scatterplot3d]; }; ISLR = derive2 { name="ISLR"; version="1.2"; sha256="1bfay6cs40crhh34v2ksn4zdxivimfyjvk19wqbnjr7vs837l3xh"; depends=[]; }; + ISM = derive2 { name="ISM"; version="0.1.0"; sha256="0by0w6zgnwcwzbmxx16s8mb1avhc6aiavqp0qkxx6hr70vrgb997"; depends=[rJava xlsx xlsxjars]; }; ISOcodes = derive2 { name="ISOcodes"; version="2017.09.27"; sha256="1nnbp110fzlckbi6vdigrn275d3j7ixys0b8np8ran876piwddjp"; depends=[]; }; - ISOpureR = derive2 { name="ISOpureR"; version="1.1.0"; sha256="1y2y7qclhzn31809fabhqzsc0rxpd6k44kzsg2rc79xkvqf57pgj"; depends=[futile_logger Rcpp RcppEigen]; }; + ISOpureR = derive2 { name="ISOpureR"; version="1.1.1"; sha256="1mi0hl32wfgc7znvs1ay9i9lwdj022d88asdgcbs63vx335qg99w"; depends=[futile_logger Rcpp RcppEigen]; }; ISOweek = derive2 { name="ISOweek"; version="0.6-2"; sha256="1f1h8pgjaa14cvaj8ldl87b4vslxwvyfj46m0hkylwp73sv3g2mm"; depends=[stringr]; }; ISR3 = derive2 { name="ISR3"; version="0.98"; sha256="0mmpdl9ndlj9i0k3zl7ja0g7y9pm67igw925ld5qnz7a36plygxs"; depends=[]; }; ISwR = derive2 { name="ISwR"; version="2.0-7"; sha256="1rd1wrvl8wlc8ya5lndk74gnfvj9wp29z8617v3kbf32gqhby7ng"; depends=[]; }; ITGM = derive2 { name="ITGM"; version="0.6"; sha256="0acrm15vb1r0nnp0bp5zf8g27i3sy3d7bpd50lj0w1rl6dgwfznh"; depends=[data_table Fgmutils ggplot2 gsubfn plyr randomcoloR rbokeh sqldf]; }; + ITNr = derive2 { name="ITNr"; version="0.1.0"; sha256="0fxh7qs96w945sp7gnjk069rp1j8bj949r9c2skabw8bnkf5yi1k"; depends=[animation blockmodeling circlize cowplot dplyr fastmatch GGally ggplot2 GoodmanKruskal igraph intergraph Matrix ndtv network networkDynamic plyr RColorBrewer reshape2 sna statnet tnet WDI xergm xergm_common]; }; IUPS = derive2 { name="IUPS"; version="1.0"; sha256="01pv03ink668fi2vxqybli0kgva13gxhqfdxkwz6qk5rnpzwvf5w"; depends=[boot Matching R2jags]; }; IalsaSynthesis = derive2 { name="IalsaSynthesis"; version="0.1.6"; sha256="15iwywvzhgiyigl8f488b7ra89rz0a7ymfsdgdlqfls3fmld7b4a"; depends=[testit]; }; Iboot = derive2 { name="Iboot"; version="0.1-1"; sha256="1fahh86kgv2axj2qg14n87v888sc0kb567s6zr3fh5zv361phwkq"; depends=[]; }; @@ -1583,11 +1617,12 @@ in with self; { ImputeRobust = derive2 { name="ImputeRobust"; version="1.2"; sha256="0hr5payxqyk5nckwx84j5wqrj477219qbp76908aylwb7c7iw9n4"; depends=[extremevalues gamlss gamlss_dist lattice mice purrr]; }; InPosition = derive2 { name="InPosition"; version="0.12.7"; sha256="1f7xb2kxikmja4cq7s1aiwhdq27zc6hghjbliqqpm8ci8860lb8p"; depends=[ExPosition prettyGraphs]; }; InSilicoVA = derive2 { name="InSilicoVA"; version="1.1.5"; sha256="15r3pdbwgnvk1qaqvb3m2xiczlv5jr7j7iwdgrxsn8n09q0aa4ds"; depends=[coda ggplot2 rJava]; }; - IncDTW = derive2 { name="IncDTW"; version="1.0.0"; sha256="0q5xfwlhraip7x1h8z4slkqndf2d73drhzc9q4kgqx3j03yb3n8c"; depends=[ggplot2 Rcpp scales]; }; + IncDTW = derive2 { name="IncDTW"; version="1.0.1"; sha256="0ycr46l1h1zxrw5kszfgl3w1f9law539fi7j1i3fb2s59n5kh2k5"; depends=[ggplot2 Rcpp scales]; }; IncucyteDRC = derive2 { name="IncucyteDRC"; version="0.5.4"; sha256="1k7jqcyx5n4my5rbyfa693ganbk91xganyagq8x8szli9h1491ii"; depends=[cowplot dplyr drc DT ggplot2 magrittr shiny tidyr XML]; }; IndTestPP = derive2 { name="IndTestPP"; version="1.0"; sha256="1ywl35k2syv46pz6ap5sjkynapqj04aq197czspqky0pvrq7ldr1"; depends=[]; }; IndepTest = derive2 { name="IndepTest"; version="0.1.0"; sha256="0l9vfp34k4nhlg3nymj0gqkpjblzbbvnz0zcajvq4c8nw9968c5i"; depends=[FNN mvtnorm Rdpack]; }; IndependenceTests = derive2 { name="IndependenceTests"; version="0.2"; sha256="04qfh2mg9xkfnvp6k7w1ip4rb663p3pzww9lyprcjvr3hcac7gqa"; depends=[xtable]; }; + IndexNumR = derive2 { name="IndexNumR"; version="0.1.0"; sha256="1385j7a1hz8i5g00x1p1rd32gq243w2zrzvk781zjqdq7az33fsw"; depends=[]; }; IndianTaxCalc = derive2 { name="IndianTaxCalc"; version="1.0.2"; sha256="1fxw884wj9n8drk2xz3rgr4f7b4fckh5firrf5gdz6d1nk9hdvc1"; depends=[]; }; InfDim = derive2 { name="InfDim"; version="1.0"; sha256="0rh3ch0m015xjkxy08vf9pc6q7azjc6sgicd2j6cwh611pqq39wq"; depends=[]; }; InferenceSMR = derive2 { name="InferenceSMR"; version="1.0"; sha256="13d3v8kyk6br33659jgql6j1nqmnd8zszqrwfw2x3khkiqzgdmhk"; depends=[survival]; }; @@ -1616,7 +1651,7 @@ in with self; { InterpretMSSpectrum = derive2 { name="InterpretMSSpectrum"; version="1.1"; sha256="00nhfz1hs2j1pqhwgw5c337kl1azr3vmlcd1krnl4fgs5yz6ksyq"; depends=[DBI doParallel enviPat foreach plyr Rdisop RSQLite]; }; InvariantCausalPrediction = derive2 { name="InvariantCausalPrediction"; version="0.7-1"; sha256="1pz06l50fm8327n1v8wnvh8q51g97crb4c07si3hywd5y1hkiwkp"; depends=[glmnet linprog mboost RColorBrewer]; }; InvasionCorrection = derive2 { name="InvasionCorrection"; version="0.1"; sha256="1wwx2kssjysl1lraac36pvxq34vg8qm0vwi861rs1iipfc35i84j"; depends=[lattice]; }; - Inventorymodel = derive2 { name="Inventorymodel"; version="1.0.5"; sha256="16aqc8202k84pwbss6g2cw7lvykjjjfdg62jg9r82skjf7zzprpg"; depends=[e1071 GameTheoryAllocation]; }; + Inventorymodel = derive2 { name="Inventorymodel"; version="1.1.0"; sha256="1l87xghdksgmb2k3a8j382p7ffi2pma38a6pn31sfjsa6bgmrdnk"; depends=[e1071 GameTheoryAllocation]; }; IrishDirectorates = derive2 { name="IrishDirectorates"; version="0.2.0"; sha256="1m3c3dj4729chk1n3k7awvi1jdfnds2w36vm268azg53j6c7l4b6"; depends=[]; }; IsingFit = derive2 { name="IsingFit"; version="0.3.1"; sha256="1prdzzp15klkdy72379bjksdgxr15nk16pqm35w95341cddxchc7"; depends=[glmnet Matrix qgraph]; }; IsingSampler = derive2 { name="IsingSampler"; version="0.2"; sha256="16vwb5pcqjvvsk9wsgj10mzhgh72iz1q6n8nmkva6y1l7xv54c8w"; depends=[magrittr nnet plyr Rcpp]; }; @@ -1631,12 +1666,13 @@ in with self; { JAGUAR = derive2 { name="JAGUAR"; version="3.0.1"; sha256="0lyc8biwj9yir1i06klp2jkb31mnzwp226aw7pwabkprfhqgfmqd"; depends=[lme4 plyr Rcpp RcppArmadillo RcppProgress reshape2]; }; JASPAR = derive2 { name="JASPAR"; version="0.0.1"; sha256="0wiyn7cz45hwy9zkvacx28zdrg78q6715cg4r9xgcb39q25s0dcy"; depends=[gtools]; }; JBTools = derive2 { name="JBTools"; version="0.7.2.9"; sha256="0bynqn3daqgmi3l9asy34mfwyfjkn35k465dfqqi3xwx6cbzlg5k"; depends=[colorspace foreach gplots plotrix]; }; + JFE = derive2 { name="JFE"; version="1.0"; sha256="18hp457m0ylk19rj3kamb1j8nn09i6i8ybk4hma7gaahy4vp9vy2"; depends=[BurStFin fAssets fBasics fPortfolio iClick MASS PerformanceAnalytics quantmod tcltk2 timeDate timeSeries xts zoo]; }; JGEE = derive2 { name="JGEE"; version="1.1"; sha256="078348n623hlyc3n9yh67vv5acsnxapmbwybvrb1i7kawmqw5msi"; depends=[gee MASS]; }; JGL = derive2 { name="JGL"; version="2.3"; sha256="1351iq547ln06nklrgx192dqlfnn03hkwj3hrliqzfbmsls098qc"; depends=[igraph]; }; JGR = derive2 { name="JGR"; version="1.8-4"; sha256="0zfjfqlfrsz4wjdq78zasvgd3ldgcx20h16bbar1l7wv843j71ym"; depends=[JavaGD rJava]; }; JM = derive2 { name="JM"; version="1.4-7"; sha256="1ajdmabifzg4jp74ghas5wf3vp4x2vnc6sh811n44a1ni727sb2n"; depends=[MASS nlme survival]; }; JMbayes = derive2 { name="JMbayes"; version="0.8-70"; sha256="1xvzyy2h3p30wxvgrm6d4dmxwiqs4l7dafpanlnykgih9wmh7xsf"; depends=[doParallel foreach Hmisc jagsUI MASS nlme Rcpp RcppArmadillo rstan shiny survival xtable]; }; - JMcmprsk = derive2 { name="JMcmprsk"; version="0.9"; sha256="1y3s42yi7adbi8b9vz4m0inb4gkdqma4n73f6nabmhb57ybf3l2y"; depends=[MASS Rcpp]; }; + JMcmprsk = derive2 { name="JMcmprsk"; version="0.9.3"; sha256="0bjaiygn2sq40f2cwa1c6j73748j2cx5q69pd4jgfgbpm9r25r4f"; depends=[MASS Rcpp]; }; JMdesign = derive2 { name="JMdesign"; version="1.1"; sha256="0w5nzhp82g0k7j5704fif16sf95rpckd76jjz9fbd71pp2d80vlh"; depends=[]; }; JOP = derive2 { name="JOP"; version="3.6"; sha256="1kpb1dy2vm4jgzd3h0qgdw53nfp2qi74hgq5l5inxx4aayncclk7"; depends=[dglm Rsolnp]; }; JOUSBoost = derive2 { name="JOUSBoost"; version="2.1.0"; sha256="0f3rr7aw20nvmlpqrq3wzgmr55lqdqhk3wphpqq7msgvaf1zrcl7"; depends=[doParallel foreach Rcpp rpart]; }; @@ -1645,9 +1681,8 @@ in with self; { JRF = derive2 { name="JRF"; version="0.1-4"; sha256="1xpvscn9iawwa0vfh3kfwzdni436bf42nvm18b8abh033ljvqpij"; depends=[]; }; JSM = derive2 { name="JSM"; version="0.1.2"; sha256="18h3jhfg5ch9312aidpbs0fz5rd54alv4kjhvkchddhp3alyhp82"; depends=[nlme Rcpp RcppEigen statmod survival]; }; JWileymisc = derive2 { name="JWileymisc"; version="0.2.1"; sha256="0cli204f1b5hj3qz62fycww12a6dv7xxxszkxgrxirw6mpdf858c"; depends=[cowplot data_table devtools foreach ggplot2 Hmisc lavaan MASS mgcv mice multcompView plyr]; }; - JacobiEigen = derive2 { name="JacobiEigen"; version="0.2-2"; sha256="1q6wqxlhslip14544px1aq446m77a8s0chvhpc19im014w4g930v"; depends=[Rcpp]; }; JavaGD = derive2 { name="JavaGD"; version="0.6-1"; sha256="13n6xzbbjgd0bpwv2xgm3dlscg87wh32q6fcq50kk6byp6yv05sc"; depends=[]; }; - Jdmbs = derive2 { name="Jdmbs"; version="1.0"; sha256="1mhr1z6427lcm018pmllmhhsbnxa7cbmp9a5bjxb5n2zy1j71623"; depends=[igraph rmarkdown]; }; + Jdmbs = derive2 { name="Jdmbs"; version="1.1"; sha256="06af66128vfcf28fylaz7qqzqrpn6s9hz89pd5jwpr32wxc5vwcg"; depends=[igraph png rmarkdown]; }; Jmisc = derive2 { name="Jmisc"; version="0.3.1"; sha256="1szn29dng54l2xmrm6pg3d5rmwdc1ks23vsnsmplnr5rx7yj002s"; depends=[]; }; JoSAE = derive2 { name="JoSAE"; version="0.2.3"; sha256="0b1jwplds5b7z15v6bvqj1rbn7zxpgvh2ykhqplxzv4mlaw6i0li"; depends=[nlme]; }; Johnson = derive2 { name="Johnson"; version="1.4"; sha256="12ajcfz5mwxvimv8nq683a2x3590gz0gnyviviyzf5x066a4q0lj"; depends=[]; }; @@ -1656,11 +1691,11 @@ in with self; { Julia = derive2 { name="Julia"; version="1.1"; sha256="0i1n150d89pkds7qyr0xycz6h07zikb2y07d5fcpaqs4446a8prg"; depends=[]; }; JuliaCall = derive2 { name="JuliaCall"; version="0.11.1"; sha256="0i2kvqys7gwabvxk5p2n6n6fpbmbwqkli1p7lqmnkfxvm4x2ayyf"; depends=[inline R6]; }; JumpTest = derive2 { name="JumpTest"; version="0.0.1"; sha256="1d5zmjwmajzdg5d1ws40zchx9wiaav01fby1v3irym2mx30jgbqn"; depends=[MASS Rcpp RcppEigen]; }; + JuniperKernel = derive2 { name="JuniperKernel"; version="1.2.3.0"; sha256="17r4ssjjayvnp9fp9jalklp3p8dadyx5hvi9z3bh3sw4b7kx4lyd"; depends=[data_table gdtools jsonlite pbdZMQ Rcpp repr]; }; KANT = derive2 { name="KANT"; version="2.0"; sha256="169j72pmdkcj6hv8qgmc02aps0ppvvl1vnr1hzrb1gsf7zj7bs3y"; depends=[affy Biobase]; }; - KATforDCEMRI = derive2 { name="KATforDCEMRI"; version="0.740"; sha256="1k8fihd9m26k14rvc5d5x0d9xc3mh8d49hs64p55np1acqfhg2sy"; depends=[locfit matlab R_matlab]; }; KENDL = derive2 { name="KENDL"; version="1.1"; sha256="05vsh3x0li964a485q3n19c7fahcprvg1bnrvffagkxf8w1iz153"; depends=[]; }; KERE = derive2 { name="KERE"; version="1.0.0"; sha256="1b16cb3ihcsp9jffmd45sd7ia4pibikmj62ad344wmq22q4fpliy"; depends=[]; }; - KFAS = derive2 { name="KFAS"; version="1.2.9"; sha256="04iq4zyy98rqvv7q4f3ypg0bmdawmwa3lwm9agbrsaiz8v89cqhk"; depends=[]; }; + KFAS = derive2 { name="KFAS"; version="1.3.1"; sha256="0hnf9ljy19hng7cvr0qixcf8h9z2spp5c9512gfm9c7zn6802k54"; depends=[]; }; KFKSDS = derive2 { name="KFKSDS"; version="1.6"; sha256="1g11f936p554bfxlm4slxhfxki5vqkks1mrbqw4w83v2rcb50f8d"; depends=[]; }; KGode = derive2 { name="KGode"; version="1.0.0"; sha256="0ikcx43kw83ppbjdm6syhmx5fs5jsr4hyhjvilgqkyr0kx1h6wag"; depends=[mvtnorm pracma pspline R6]; }; KMDA = derive2 { name="KMDA"; version="1.0"; sha256="0x4kjjdd59wvgg699vrj99wqg3s1qbkbskis1c34xv9b8bzcv94j"; depends=[]; }; @@ -1668,24 +1703,25 @@ in with self; { KMsurv = derive2 { name="KMsurv"; version="0.1-5"; sha256="0hi5vvk584rl70gbrr75w9hc775xmbxnaig0dd6hlpi4071pnqjm"; depends=[]; }; KODAMA = derive2 { name="KODAMA"; version="1.4"; sha256="0qzpgj6ljzd8n8vgmf53pmblsmypl86j7njd3pz0d370bxfchsqj"; depends=[Rcpp RcppArmadillo]; }; KOGMWU = derive2 { name="KOGMWU"; version="1.1"; sha256="0n07wrpmmvxflxpmhkp3gm40xz2w4j0l8dsljhmfiyxcf5y7kq2g"; depends=[pheatmap]; }; + KRIG = derive2 { name="KRIG"; version="0.1.0"; sha256="1hpmjzzrh5b042xh14dgxvn5x5ini63vq5jz1i6rjgvsdf734f98"; depends=[Rcpp RcppArmadillo Rdpack]; }; KRLS = derive2 { name="KRLS"; version="1.0-0"; sha256="1zyf3smfzfm3n43i35rlj1w6vcip2hxkvk4f8lp77xbsry0gmwjw"; depends=[]; }; KRMM = derive2 { name="KRMM"; version="1.0"; sha256="0wxzhrrc4lx20nxjny7rcfw3bya7drn88zbrlzx9f531298xwbrk"; depends=[cvTools kernlab MASS robustbase]; }; KSD = derive2 { name="KSD"; version="1.0.0"; sha256="0wqmbr51yv7f87pnhph2nrj9y2d5jql2agizcaq6lax23lj6xfb7"; depends=[pryr]; }; KSEAapp = derive2 { name="KSEAapp"; version="0.99.0"; sha256="1gfgpa2d32y6bzvf4ww70sm7niq34sqmyrhi0phlqxshqq9xviqc"; depends=[gplots]; }; KScorrect = derive2 { name="KScorrect"; version="1.2.0"; sha256="1rymzllm97z22xwsn5wbn02c0xp0kfdp73mk9jrk81hfdpd15p4i"; depends=[MASS mclust]; }; + KSgeneral = derive2 { name="KSgeneral"; version="0.1.0"; sha256="19rrm411c2fvx4bxi9qc6v9spqpf52k08i7gvhici9dx2hhm3134"; depends=[dgof MASS Rcpp]; }; KTensorGraphs = derive2 { name="KTensorGraphs"; version="0.1"; sha256="1hsndxslqgca0ay4q277zjwnwz8bzwfkzz915dgqvjd2v4afrvzx"; depends=[]; }; KappaGUI = derive2 { name="KappaGUI"; version="2.0.1"; sha256="0l2kgh9bflag5s056ib8fkajl56yr8c0qsmd9ma56i9ay7i540da"; depends=[irr shiny]; }; KappaV = derive2 { name="KappaV"; version="0.3"; sha256="13mmfb8ijpgvzfj20andqb662950lp9g25k5b26r5ba65p7nhva7"; depends=[maptools PresenceAbsence rgeos sp]; }; - KarsTS = derive2 { name="KarsTS"; version="1.1"; sha256="0dg0w7n2ga22wkbg0sxdx93zyksvvpwx1f87ki55mvk9i5kb2a5k"; depends=[BaylorEdPsych circular forecast mgcv missForest MVN nonlinearTseries rgl stinepack stlplus tcltk2 tkrplot tseries tseriesChaos zoo]; }; - KenSyn = derive2 { name="KenSyn"; version="0.1"; sha256="0j5ql7d1dqkr2dzpwad6bspa8g5cjd4hjr6a5ig0zsa9rszcdyjn"; depends=[lme4 nlme]; }; + KarsTS = derive2 { name="KarsTS"; version="2.0"; sha256="0mha0q5zvijrhrl0nsq229ipf6k2mhw2yqc21vvv8sifh9b9qp4y"; depends=[BaylorEdPsych circular forecast infotheo mgcv missForest MVN nonlinearTseries plot3D rgl stinepack stlplus tcltk2 tkrplot tseries tseriesChaos zoo]; }; + KenSyn = derive2 { name="KenSyn"; version="0.2"; sha256="19xbdgxafrgxwz7swg7gzrkxszxy7ksgnmz96sar8ysmwrp7dz9i"; depends=[lme4 metafor nlme]; }; Kendall = derive2 { name="Kendall"; version="2.2"; sha256="0z2yr3x2nvdm81w2imb61hxwcbmg14kfb2bxgh3wmkmv3wfjwkwn"; depends=[boot]; }; KernSmooth = derive2 { name="KernSmooth"; version="2.23-15"; sha256="1xhha8kw10jv8pv8b61hb5in9qiw3r2a9kdji3qlm991s4zd4wlb"; depends=[]; }; KernSmoothIRT = derive2 { name="KernSmoothIRT"; version="6.1"; sha256="1hq4sykddh9sg24qrnccii89nqxmq7hnldhn8wl6y62aj0h1nrqm"; depends=[plotrix Rcpp rgl]; }; - KernelKnn = derive2 { name="KernelKnn"; version="1.0.6"; sha256="1kf8w7lmp6czgnpcnqh0qmvsisflgs1kdicaj66y3nq16qwbss74"; depends=[Rcpp RcppArmadillo]; }; + KernelKnn = derive2 { name="KernelKnn"; version="1.0.8"; sha256="1xiz90n9wggn5fv42h8c6gd3j6vmkwyq1433wwnmzrz5kw7f6vgb"; depends=[Rcpp RcppArmadillo]; }; Kernelheaping = derive2 { name="Kernelheaping"; version="2.1.8"; sha256="03m5dwgm98x6ncifyyp2yxln4bm87rkrx84bdihywjd0x73pbklv"; depends=[fastmatch ks magrittr MASS mvtnorm plyr sp sparr]; }; - Kmisc = derive2 { name="Kmisc"; version="0.5.0"; sha256="0pbj3gf0bxkzczl6k4vgnxdss2wmsffqvcf73zjwvzvr8ibi5d95"; depends=[data_table knitr lattice markdown Rcpp]; }; KnapsackSampling = derive2 { name="KnapsackSampling"; version="0.1.0"; sha256="17yzmd11k1n5iy54vbcvpzvkm8ypbl6n1kfi931wwrrcq9y7hg22"; depends=[lpSolve]; }; - Knoema = derive2 { name="Knoema"; version="0.1.9"; sha256="0j6d8xyk7vadxcn9rd6dgmd8k0vb78rrwdh8yw377jf82ncg9283"; depends=[base64enc digest httr jsonlite lubridate xts zoo]; }; + Knoema = derive2 { name="Knoema"; version="0.1.13"; sha256="10r7gpr39f32h4znmh8kywcs0l2g9ij75qqcyd3ai1fyif54wyqc"; depends=[base64enc digest httr jsonlite lubridate xts zoo]; }; KnowBR = derive2 { name="KnowBR"; version="1.5"; sha256="18xcdlzr8ipsv4zxmk3424apqrgzgf87h00lwjw5ll2y99vy2ds5"; depends=[fossil mgcv plotrix sp vegan]; }; KoNLP = derive2 { name="KoNLP"; version="0.80.1"; sha256="1chj8kv1l405dm0jcsxjjjxx395z05sfxbcc5vxnpbydx7lxa6zy"; depends=[devtools hash rJava RSQLite Sejong stringr tau]; }; KoulMde = derive2 { name="KoulMde"; version="3.0.0"; sha256="01mczlrdrfwdp2cj10kdqay3qpg8xf2v7vym62pll9l8n595snrl"; depends=[Rcpp]; }; @@ -1693,14 +1729,14 @@ in with self; { KraljicMatrix = derive2 { name="KraljicMatrix"; version="0.2.0"; sha256="0vw95py3pk2r9kxvf6v4fq8m5zm9fr83acwxg3m8x6bvq51layma"; depends=[dplyr ggplot2 magrittr tibble]; }; KrigInv = derive2 { name="KrigInv"; version="1.3.1"; sha256="0fcfv2vl572l8qp1ilhjai6zrw15bf1z41qm7xlfspfbj611ga7k"; depends=[DiceKriging pbivnorm randtoolbox rgenoud]; }; L1pack = derive2 { name="L1pack"; version="0.38.19"; sha256="09n1045lsx1ap47mhzcqghmwwhj24kvpjjr3ysprj058jp5g7ri0"; depends=[]; }; - LAGOSNE = derive2 { name="LAGOSNE"; version="1.0.0"; sha256="1s6rqg9lf7b3inglp44l8fsi313qp7l9vri4p99nb2x5lff9z4j7"; depends=[curl dplyr lazyeval magrittr purrr rappdirs sf stringr]; }; + LAGOSNE = derive2 { name="LAGOSNE"; version="1.1.0"; sha256="08sf4mm40gv9mr57pxsl1b62s2dqvbvrhy2irzqspyqk5ai2aw0m"; depends=[curl dplyr lazyeval magrittr purrr rappdirs sf stringr]; }; LAM = derive2 { name="LAM"; version="0.1-22"; sha256="0gj4j5yqyllxbhz6iayh0w473hzq0xc1r9dlyxhh67k9mg951phb"; depends=[CDM coda Rcpp RcppArmadillo sirt]; }; LANDD = derive2 { name="LANDD"; version="1.1.0"; sha256="13szkww9nw8zywfrqd8mwgj9csgragm0bx8ia52rcpakpc3hv3hx"; depends=[BH doParallel fdrtool foreach GGally ggplot2 GOSemSim GOstats igraph intergraph Matrix modeest mvtnorm pROC Rcpp]; }; LARF = derive2 { name="LARF"; version="1.4"; sha256="1sqib7smgjacn07ishwls1nlbvcb6fpp1vhrjwf9g4xf9jk30i8h"; depends=[Formula]; }; LBSPR = derive2 { name="LBSPR"; version="0.1.2"; sha256="09jvdjagf4icnigbfw18z36ya4llg84fa6j2khd22cl60y81r5i3"; depends=[dplyr ggplot2 gridExtra plotrix RColorBrewer Rcpp shiny tidyr]; }; LCA = derive2 { name="LCA"; version="0.1"; sha256="14nhx2fs18558zljnw56mdz3qx30v394llhzswxhznjfiiqc9z5h"; depends=[]; }; LCAextend = derive2 { name="LCAextend"; version="1.2"; sha256="1y9azq9v42a3z5fq6gj8js89qblb2z93k4mg4jmw0wgkyv6mysfc"; depends=[boot kinship2 mvtnorm rms]; }; - LCAvarsel = derive2 { name="LCAvarsel"; version="1.0"; sha256="17k3l2jzw5fik5pd14sqg8kshb2a4rxgm7hw5kzag7gni9fcilaz"; depends=[doParallel foreach GA MASS memoise nnet poLCA]; }; + LCAvarsel = derive2 { name="LCAvarsel"; version="1.1"; sha256="0aqc9rbrc8n6s9xllmamby219qsnxd4ajvffjr21qlkhkaklirb1"; depends=[doParallel foreach GA MASS memoise nnet poLCA]; }; LCF = derive2 { name="LCF"; version="1.7.0"; sha256="1n5gwnkj26b7w6bzapda049bd4aqb317cip05nf0vy04xjc8giyc"; depends=[quadprog]; }; LCFdata = derive2 { name="LCFdata"; version="2.0"; sha256="1x3vbr6hdviqvd6dxn1kb449g0q5zkfmjsmr5nxd2g82p69lv3xm"; depends=[]; }; LCMCR = derive2 { name="LCMCR"; version="0.4.3"; sha256="1pzavzlr3fml4chrh0fmj8688a3xa153w5gp404nx3qld5sizqrm"; depends=[]; }; @@ -1715,7 +1751,7 @@ in with self; { LEANR = derive2 { name="LEANR"; version="1.4.9"; sha256="053xy13ys5hibafdnbkwqdk36hw7dhanp4frfacpfpn5f9nfh95r"; depends=[foreach igraph]; }; LEAP = derive2 { name="LEAP"; version="0.2"; sha256="1yrhanxvr7krvllqzv17qkc4wvmd7mgl57am8sn53773dbfipfc4"; depends=[]; }; LEAPFrOG = derive2 { name="LEAPFrOG"; version="1.0.7"; sha256="0z9ahkk4qzc45h1r806frv9cd84vvshvn5mr84gx7qdxljfkfq6h"; depends=[alabama MASS]; }; - LEGIT = derive2 { name="LEGIT"; version="1.1.1"; sha256="108bxw98z0hgm4nnxvn54c5npm48qsif7y91dqsjx69p6azckqmh"; depends=[doSNOW foreach formula_tools iterators pROC snow]; }; + LEGIT = derive2 { name="LEGIT"; version="1.2.1"; sha256="1ma4rpchinl4i58ljcdfgwik1rfc79waicpv1f9wdddjfsijwyay"; depends=[boot doSNOW foreach formula_tools gtools Hmisc iterators pROC snow]; }; LFDR_MLE = derive2 { name="LFDR.MLE"; version="1.0"; sha256="11vy6gg2x98s1y8a5ns9vcd61gw8ax1lhn4lvicdjbd1lg18nm83"; depends=[]; }; LFDREmpiricalBayes = derive2 { name="LFDREmpiricalBayes"; version="1.0"; sha256="1imw3djmbpdyplv9dmdzzirp9imk88j0kcxcyfh8yr9ywgd77x6b"; depends=[matrixStats R6]; }; LGEWIS = derive2 { name="LGEWIS"; version="1.1"; sha256="1i52vp0ghjzmyh4r8h6jpyij7x4skw99xvw017b56m8fg64zy70r"; depends=[CompQuadForm geeM mvtnorm SKAT]; }; @@ -1730,13 +1766,14 @@ in with self; { LMERConvenienceFunctions = derive2 { name="LMERConvenienceFunctions"; version="2.10"; sha256="08jz0i7sv7gn3bqckphbmnx0kc6yjnfvi06iyf7pcdzjaybxhj06"; depends=[fields LCFdata lme4 Matrix mgcv rgl]; }; LMest = derive2 { name="LMest"; version="2.4.1"; sha256="06ak1aqk2sg4brdb09g3x7gkjbb3p11fwwnin3h67j8wh510ihyi"; depends=[MASS MultiLCIRT]; }; LMfilteR = derive2 { name="LMfilteR"; version="0.1.1"; sha256="0wjrnzki6mnar3lxfr2mcvk98b58qkqpbb9xx7vgrw567g1ga1ig"; depends=[MASS]; }; + LN0SCIs = derive2 { name="LN0SCIs"; version="0.1.5"; sha256="09zr6lrvv7lw9qp3vz4n2dv0v3q7wq06wwvwpb2pm0r335bnrf89"; depends=[]; }; LNIRT = derive2 { name="LNIRT"; version="0.2.0"; sha256="02gaqn2pixry6qgybwszsv60pk6hzdd51axchkq3ma3gb6biw4fv"; depends=[MASS]; }; LOGICOIL = derive2 { name="LOGICOIL"; version="0.99.0"; sha256="1wgg7kigzzk5ghjn3hkjf1bb8d6mvjfmkwq64phri5jpxd742ps9"; depends=[nnet]; }; LOGIT = derive2 { name="LOGIT"; version="1.3"; sha256="1nx9ycrys0p08xr1n7bqgn47k5wz1zbp6w5pwsqk5c6f6did2rs1"; depends=[caret e1071 ggplot2 MASS pROC reshape]; }; LOST = derive2 { name="LOST"; version="1.3"; sha256="01ymnczsnfml04hb6hbi041khkz2aki78qr3hriw7n3bzs5i7xim"; depends=[e1071 gdata MASS miscTools pcaMethods rgl shapes]; }; LPCM = derive2 { name="LPCM"; version="0.45-0"; sha256="15gpb59556s28npdsw1r821rld7b11y1m2m97m320n9k0z4vbk3i"; depends=[]; }; LPKsample = derive2 { name="LPKsample"; version="1.0"; sha256="0vxps8zd9zg1aw4p2qd8wamcjkbl68yvppnlvshm2ry5dahwz1wk"; depends=[apcluster igraph mclust]; }; - LPM = derive2 { name="LPM"; version="2.6"; sha256="0fr84l4qxr1ckjafw0i8g6fn74g8qavcs218g3wa03ckab0y98ps"; depends=[fracdiff MASS QRM]; }; + LPM = derive2 { name="LPM"; version="2.7"; sha256="1anjgflj1272xrghn3s9a21f2dfggppnzjqh3p8zaid91bzg0g34"; depends=[fracdiff MASS QRM]; }; LPR = derive2 { name="LPR"; version="1.0"; sha256="16kmfm6p7cwnzpd054ik0cy0ipif6zssdfyxyfm0cijz8z4z40x7"; depends=[doParallel foreach glmnet iterators lattice Matrix slam]; }; LPS = derive2 { name="LPS"; version="1.0.10"; sha256="0gf3jmhfki01z8fm5xdx59gxvhgzqd10x2iwa8369iz9dvwbjk8j"; depends=[]; }; LPStimeSeries = derive2 { name="LPStimeSeries"; version="1.0-5"; sha256="0jmcy8076w4bzfnxaq2m3s60c1wdmywkwzfyrc19wdm8idf666wh"; depends=[RColorBrewer]; }; @@ -1747,40 +1784,42 @@ in with self; { LS2W = derive2 { name="LS2W"; version="1.3-3"; sha256="0pdsv7ld0j116rh94m5y1i2mwrzc80fqxmc6ykc51i1sj6ws3i5k"; depends=[wavethresh]; }; LS2Wstat = derive2 { name="LS2Wstat"; version="2.0-3"; sha256="0wkh1a6xbp3qg5favxsj166jcgdza16zki675gswxckana6s4is7"; depends=[geoR LS2W matrixStats RandomFields spdep]; }; LSAfun = derive2 { name="LSAfun"; version="0.5.1"; sha256="0wj2j53jizg014sppag9zbs5hzc3mvpg1fx1s7l4ff6rabhgvlff"; depends=[lsa rgl]; }; - LSAmitR = derive2 { name="LSAmitR"; version="1.0-0"; sha256="18rpvbiq3vqdcxzbx15x16y4hwdk050fk0wpccwcdgzlf79fjv6f"; depends=[Hmisc lme4]; }; + LSAmitR = derive2 { name="LSAmitR"; version="1.0-1"; sha256="0p1j4q1b7488wbwl2c9py6ldq2j7ri1dvnmmknx5lwvzv0xsawsd"; depends=[Hmisc lme4]; }; LSC = derive2 { name="LSC"; version="0.1.5"; sha256="1nlnwqb24sbgvl96azh8a833ij5xknjr2wr8shs59lm2n63a3ql9"; depends=[fields gam LICORS Matrix RColorBrewer]; }; - LSD = derive2 { name="LSD"; version="3.0"; sha256="069p33aw6iwikp82b7b8wa77wlyjqwr4hcwvrgaxgwqdgn6jjg3k"; depends=[]; }; - LSDinterface = derive2 { name="LSDinterface"; version="0.3.1"; sha256="11cckjhpbnckaf06gy7864l26sics9ksilynrpjv1gbb2ry2sdyl"; depends=[abind]; }; + LSD = derive2 { name="LSD"; version="4.0-0"; sha256="0fsp3pwrnnic9mzkd6yxa4bnxbvg68712lb20vd42wf6jb39r2h3"; depends=[]; }; + LSDinterface = derive2 { name="LSDinterface"; version="0.4.0"; sha256="0nj4m924cj7x2djalrfyrrmycq2ha6s52m34kjgs7fc9f548lhx0"; depends=[abind]; }; + LSDsensitivity = derive2 { name="LSDsensitivity"; version="0.1.4"; sha256="1gfd890vr31ab37xbx7yhwbqk6y659d0dqyir7vrgma48cd0nidv"; depends=[abind car DiceKriging kSamples LSDinterface randtoolbox rgenoud sensitivity tseries]; }; LSMonteCarlo = derive2 { name="LSMonteCarlo"; version="1.0"; sha256="0w5042phkba5dw92r67ppp2s4khjpw5mm701dh9dya9lhj88bz6s"; depends=[fBasics mvtnorm]; }; LSPFP = derive2 { name="LSPFP"; version="1.0.0"; sha256="074qd7zxa54cawipmba1khb6hyrkg553vc25gf2z0ydyv14shm0w"; depends=[bit64 data_table R_utils RCurl seqinr tcltk2]; }; LSRS = derive2 { name="LSRS"; version="0.1.0"; sha256="13xfh2v0xnsvvxayvl9mkhdzd5x3qqdlqsa109z3j9yrhs3615ha"; depends=[]; }; LSTS = derive2 { name="LSTS"; version="1.0"; sha256="1vgdqyj6k50gqfffqfb4n3sw27jrq21nl2h8sz8942w4a8fn7sgv"; depends=[]; }; LTPDvar = derive2 { name="LTPDvar"; version="1.2"; sha256="0r9v5g5y9n85jdcvm7zpapm73ism48m3mmybpcmgcs028h2ndv7v"; depends=[]; }; LTR = derive2 { name="LTR"; version="1.0.0"; sha256="15g5hbrwhab80sarbjgwzvsn6c4fl18h014kz5fpzf0n1rijybik"; depends=[]; }; - LTRCtrees = derive2 { name="LTRCtrees"; version="0.5.0"; sha256="18awxiln2ilr0jjyvkv47a3xy7v8rjlaksklb4pcn1kdlvb1nqf0"; depends=[interval partykit rpart survival]; }; + LTRCtrees = derive2 { name="LTRCtrees"; version="1.0.0"; sha256="08wkhd7sqk0q9sahg6bd1m2xgl5yk9ldvripa6vyps0nni1h8lb6"; depends=[interval inum partykit rpart survival]; }; LVMMCOR = derive2 { name="LVMMCOR"; version="0.01.1"; sha256="1lq4hqcg0qkywdr4a22m1fr3m97749mm6n2jzdj9i7jrf0agc1fs"; depends=[MASS nlme]; }; LW1949 = derive2 { name="LW1949"; version="1.1.0"; sha256="147ymp7j98ihp1dcz3p5v9ar6h767phjdnga5q5vf1wwa2mxawg7"; depends=[MASS mgcv plotrix]; }; LZeroSpikeInference = derive2 { name="LZeroSpikeInference"; version="1.0.3"; sha256="15x29afaq13iwlj66h97k3kczg9rfgp6i9d76rji58hfgh8i8by6"; depends=[]; }; LaF = derive2 { name="LaF"; version="0.8.0"; sha256="1nasj0502i0dbzqgm1pdvmc0wj1hk2q5fzanpcsh7zslsikiqxyq"; depends=[Rcpp]; }; - LabourMarketAreas = derive2 { name="LabourMarketAreas"; version="3.1"; sha256="0ic6rm47iqkrlds7cshfcd0vjpgd7hldlicjq1wzxx0p3fbbnqjm"; depends=[data_table maptools rgdal rgeos sp spdep]; }; + LabourMarketAreas = derive2 { name="LabourMarketAreas"; version="3.2"; sha256="08jm419cf22z144csif2ndf53743v1xl9zpa6zamd3df2snr59x2"; depends=[data_table maptools rgdal rgeos sp spdep]; }; Lahman = derive2 { name="Lahman"; version="6.0-0"; sha256="1616iaa28z6wrxcvvmnic5awj33b7km9yxnn8bnll9yw99ks6qk6"; depends=[dplyr]; }; LakeMetabolizer = derive2 { name="LakeMetabolizer"; version="1.5.0"; sha256="06mvdrdyl0rh9rwd0jxww0sycadcp7cj08hq35q6vyzq0jkxn2xf"; depends=[plyr rLakeAnalyzer]; }; Lambda4 = derive2 { name="Lambda4"; version="3.0"; sha256="04ikkflfr0nmy1gr3gfldlh2v8mpl82k1wwnzp57d2kn75m9vbxz"; depends=[]; }; LambertW = derive2 { name="LambertW"; version="0.6.4"; sha256="09ygalklv0d767nwziqwaxa7h517rzqgaznmb04q43122x2gwb3k"; depends=[ggplot2 lamW MASS RColorBrewer Rcpp reshape2]; }; Langevin = derive2 { name="Langevin"; version="1.2"; sha256="0iy1nh4wzipw8spmfr0kscdnpaz3cq4idkbl5khiia2jid0kimvl"; depends=[Rcpp RcppArmadillo]; }; LaplaceDeconv = derive2 { name="LaplaceDeconv"; version="1.0.4"; sha256="0n56cmrb536j1vmfizzag1x8wm68c2znpclwbdl8qraqzp8rmffx"; depends=[orthopolynom polynom]; }; - LaplacesDemon = derive2 { name="LaplacesDemon"; version="16.0.1"; sha256="0yc6bv1mvs8ivrjgi49xz5bn4if24693rw148w5zxd11r3ryy8dy"; depends=[]; }; + LaplacesDemon = derive2 { name="LaplacesDemon"; version="16.1.0"; sha256="1fx85kfdvap914b2fsylkd6wiwcfxpmndkrynivwjczwx1hr5na1"; depends=[]; }; LassoBacktracking = derive2 { name="LassoBacktracking"; version="0.1.2"; sha256="1z1cnj6r6cq3b8xa9qck3ijfmzsr70r2p9m1ndakijb36pgwrzcs"; depends=[Matrix Rcpp]; }; - LassoSIR = derive2 { name="LassoSIR"; version="0.1"; sha256="0nc32kbmg9fn786yldw8x7753nky78aqwdh11kffc6jl34l3svys"; depends=[glmnet]; }; + LassoSIR = derive2 { name="LassoSIR"; version="0.1.1"; sha256="0ap8335ms12nsc7jvd48244zya54w05wj91qkhb0i63730r508c3"; depends=[glmnet]; }; Laterality = derive2 { name="Laterality"; version="0.9.3"; sha256="0pl5bfbkzhgxjjzzh99s6rh4jsq0pbcgc902i0z2lmmivgs5qmd6"; depends=[ade4]; }; LatticeKrig = derive2 { name="LatticeKrig"; version="6.4"; sha256="02il7cks03kmbra3sf90kdfp0dzg4kfmy512hd542nzwwa8pivsm"; depends=[fields spam]; }; + Lavash = derive2 { name="Lavash"; version="1.0"; sha256="0cjl8crk0rdkyzp069fk4k0sapcjmqm3q40z5mgl0i1n59kn4s07"; depends=[glmnet MASS pracma]; }; LeArEst = derive2 { name="LeArEst"; version="0.1.5"; sha256="13rxch3f16yvcil255abdp2vc7v2ipy3xj38s7hmjikqfdmxpkw4"; depends=[conicfit jpeg opencpu]; }; LeLogicielR = derive2 { name="LeLogicielR"; version="1.2"; sha256="0h52pzrksi1mn55mnxbfi61hl7x61cnkhp450slfrk68f6kp30x6"; depends=[gdata IndependenceTests RColorBrewer xtable]; }; LeafAngle = derive2 { name="LeafAngle"; version="1.2-1"; sha256="0g3i5300f3rvjz7g7z8s5n8xdcsp41gf1vnr4g36m1likddfpxlx"; depends=[]; }; LeafArea = derive2 { name="LeafArea"; version="0.1.7"; sha256="0pn6hh9ipr609pi49ls8wxnx7v8q1wyp84i22zzwxyzwaap5nmj2"; depends=[]; }; LearnBayes = derive2 { name="LearnBayes"; version="2.15"; sha256="0cz2rgqy1cmdz2h1qbdvfqxmmdzmg2z1scdlxr7k385anha13ja5"; depends=[]; }; - LearnGeom = derive2 { name="LearnGeom"; version="1.0"; sha256="0n97jzmi7zg1iysawgr753mig49fvzymldgh8nqqcgql1rjf3yph"; depends=[RgoogleMaps]; }; - LendingClub = derive2 { name="LendingClub"; version="1.0.3"; sha256="0gnykp51nnchm79w0s3wx7q5790yzjp1fjgm12v4jjxzq30gjmcm"; depends=[dplyr httr jsonlite plyr]; }; + LearnGeom = derive2 { name="LearnGeom"; version="1.3"; sha256="0fqf5k3gsdxwyfcbkypqiq0ir8ay8r9bdy8iljhj308ammq0mxzk"; depends=[RgoogleMaps]; }; + LendingClub = derive2 { name="LendingClub"; version="1.0.4"; sha256="03pgarbraj6in7pk7zaci98aq6dh52vsqb64my5p0bczgl2cpzmm"; depends=[dplyr httr jsonlite plyr]; }; LexisPlotR = derive2 { name="LexisPlotR"; version="0.3"; sha256="1qdgs6p11j0ign27bbnn32g65sw42982ijrig5cwqsdvxpdabjl8"; depends=[ggplot2]; }; LiblineaR = derive2 { name="LiblineaR"; version="2.10-8"; sha256="17ykazac7iv02bxl8xg948vhbdr32icdm1v4bk31zmslp4xsk08g"; depends=[]; }; LiblineaR_ACF = derive2 { name="LiblineaR.ACF"; version="1.94-2"; sha256="1ldkb63yhm1ki8i585wp5byx6y0kvclwy3ncacgcdqqk0p41cyi6"; depends=[]; }; @@ -1793,9 +1832,8 @@ in with self; { LindenmayeR = derive2 { name="LindenmayeR"; version="0.1.13"; sha256="01wnvmxdb91ai21h3plgsmy6ds7564s5wq2xyr905ma4a2d8afn5"; depends=[stringr]; }; LindleyR = derive2 { name="LindleyR"; version="1.1.0"; sha256="163i604q683znp6q544hnv4vibygwvsxcfhh8m7iaqr42li3c0ak"; depends=[lamW]; }; LinearRegressionMDE = derive2 { name="LinearRegressionMDE"; version="1.0"; sha256="0nl29l10y5kpds1i4sv7jwizq61fmh5c0zpj8x64qfif4l6y4v0d"; depends=[]; }; - LinearizedSVR = derive2 { name="LinearizedSVR"; version="1.3"; sha256="0h3xmlnd5x37r5hdhcz90z5n1hsbr2ci3m939i89p1x9644i2l5g"; depends=[expectreg kernlab LiblineaR]; }; - LinkageMapView = derive2 { name="LinkageMapView"; version="2.1.0"; sha256="1k2qrpxvy9ymkll63icbm2b9alfw0hg10rawigwbs2xv9n8vyb4p"; depends=[plotrix RColorBrewer]; }; - LinkedMatrix = derive2 { name="LinkedMatrix"; version="1.2.0"; sha256="14q8n0zqm21fwfyfqvxdacxj6mdipgi2143d8xksifk5ihhdj64v"; depends=[]; }; + LinkageMapView = derive2 { name="LinkageMapView"; version="2.1.2"; sha256="101g4djzkxgxbn87an2vz4s9nwn8gwz7a3p3wg0y4zpdd1pdp716"; depends=[plotrix qtl RColorBrewer]; }; + LinkedMatrix = derive2 { name="LinkedMatrix"; version="1.3.0"; sha256="1p5rg50g1pq700cx9jk4ackiyin5c2nanxq677cn840w6r11vm2g"; depends=[crochet]; }; Lmoments = derive2 { name="Lmoments"; version="1.2-3"; sha256="13p0r4w16jvjnyjmkhkp3dwdfr1gap2l0k4k5jy41m8nc5fvcx79"; depends=[]; }; LncFinder = derive2 { name="LncFinder"; version="1.0.0"; sha256="1ygbmazjm2jk0wrd13khpx8rkwd51cb50qxs2zdad0w09705mpsx"; depends=[caret e1071 seqinr]; }; LncMod = derive2 { name="LncMod"; version="1.1"; sha256="08001y7s93i3k3478jqfh9zsgpq6ym1xmdmldi7s76zbfr1nknvy"; depends=[pheatmap survival]; }; @@ -1812,31 +1850,30 @@ in with self; { LogisticDx = derive2 { name="LogisticDx"; version="0.2"; sha256="0ciygvynnyajpn1glxy6mwj9vbl7iv8a8dfsi6wxjxp2rac68rig"; depends=[aod data_table pROC RColorBrewer rms speedglm statmod]; }; LogitNet = derive2 { name="LogitNet"; version="0.1-1"; sha256="08xi5rpbqkc1b3qj24blv3l0r68wcqbsbjcqxiypm75f3c2irc4i"; depends=[]; }; LogrankA = derive2 { name="LogrankA"; version="1.0"; sha256="005zkpzi8h03qvqlpkygrf9xv4q77klafkfxw47x04jvkhklwigb"; depends=[]; }; - LoopAnalyst = derive2 { name="LoopAnalyst"; version="1.2-4"; sha256="02p46agsdbvw6dpgzahq9hfmy184jrkwa1hhnrcbrsmm54n3m2bx"; depends=[nlme]; }; + LoopAnalyst = derive2 { name="LoopAnalyst"; version="1.2-6"; sha256="1gy9v6qiwkwbwp4snif2imf6zn50ffjrig54ln57c5v5pk3phnvv"; depends=[nlme]; }; LotkasLaw = derive2 { name="LotkasLaw"; version="0.0.1.0"; sha256="11kq52yavicimp7ll7ljrs69a5fxf68ydb9md7v6b02iw5mwbmz7"; depends=[]; }; - LowRankQP = derive2 { name="LowRankQP"; version="1.0.2"; sha256="0is7v4cy4w1g3wn4wa32iqv4awd1nwvfcb71b3yk5wj59lpm8gs3"; depends=[]; }; + LowRankQP = derive2 { name="LowRankQP"; version="1.0.3"; sha256="1a46rk0fhpnrlfzmydy7zjswrm6hf056qxgf5p10naq6025whf8x"; depends=[]; }; LowWAFOMNX = derive2 { name="LowWAFOMNX"; version="1.1.1"; sha256="0f75qsv6pisgvk39yagzfxscnyfsgh63rmhp4gpybpl0pqmjp48x"; depends=[Rcpp RSQLite]; }; LowWAFOMSobol = derive2 { name="LowWAFOMSobol"; version="1.1.1"; sha256="1ym3i2m1am356di9lcp5nfmxq0np3c4bwsv6bbmf7hg02j7dhwi4"; depends=[Rcpp RSQLite]; }; LumReader = derive2 { name="LumReader"; version="0.1.0"; sha256="1h2r3c9xkwlnaicn65085bdx7y86ha2fpd5mxirqax5lm6d8lirc"; depends=[gridExtra lattice plotly shiny]; }; Luminescence = derive2 { name="Luminescence"; version="0.7.5"; sha256="07v78diyjvbymwidpa9f5bykaafczv0f88f6r926mk949sj1ici4"; depends=[bbmle data_table httr magrittr matrixStats minpack_lm raster Rcpp RcppArmadillo readxl shape XML zoo]; }; M3 = derive2 { name="M3"; version="0.3"; sha256="1l40alk166lshckqp72k5zmsgm7s5mgyzxlp11l64mgncjwkw2r3"; depends=[mapdata maps ncdf4 rgdal]; }; - M4comp = derive2 { name="M4comp"; version="0.0.1"; sha256="1lxm6qcbdp7i00vxbikhyl7pdxnz4czar10kh9xm0qwy8sl8lxg2"; depends=[]; }; MADPop = derive2 { name="MADPop"; version="1.1"; sha256="1w2jbiki6d14y32p8a50b8g53m1iva2kgik14yg27z5hx1rwwq97"; depends=[BH Rcpp RcppEigen rstan StanHeaders]; }; - MAGNAMWAR = derive2 { name="MAGNAMWAR"; version="2.0.0"; sha256="0vvzjqjhxnjxj3askm708bl07ph4zs9jykpw4yg5dsysy58cjl0z"; depends=[ape coxme doParallel dplyr foreach iterators lme4 multcomp plyr qqman seqinr survival]; }; - MAINT_Data = derive2 { name="MAINT.Data"; version="1.2.0"; sha256="0smc1mbnzndmna6kr9jk268llzsr3lkczjvz0kmkm6dzcw21jgd4"; depends=[MASS mclust miscTools pcaPP Rcpp RcppEigen robustbase rrcov sn]; }; + MAGNAMWAR = derive2 { name="MAGNAMWAR"; version="2.0.2"; sha256="11031gmc6zrhn6vdzza4qqvwc48h09kbvkikqznqr9hhkysv7c11"; depends=[ape coxme doParallel dplyr foreach iterators lme4 multcomp plyr qqman seqinr survival]; }; + MAINT_Data = derive2 { name="MAINT.Data"; version="1.2.1"; sha256="0fmlmb88005diqwbxlgkzzb7bvxpdkiqiadp649id3mgcz100kcd"; depends=[MASS mclust miscTools pcaPP Rcpp RcppEigen robustbase rrcov sn]; }; MALDIquant = derive2 { name="MALDIquant"; version="1.17"; sha256="047s6007ydc38x8wm027mlb4mngz15n0d4238fr8h43wyll5zy0z"; depends=[]; }; - MALDIquantForeign = derive2 { name="MALDIquantForeign"; version="0.11"; sha256="11akflnz4d3vbal1zqyv58n8dwggnix2lzd1r1kkvwja6izb5z08"; depends=[base64enc digest MALDIquant readBrukerFlexData readMzXmlData XML]; }; + MALDIquantForeign = derive2 { name="MALDIquantForeign"; version="0.11.1"; sha256="1aj6gakhbpis576b264s43w55dhmd5rszj54z910plybxq8hzmir"; depends=[base64enc digest MALDIquant readBrukerFlexData readMzXmlData XML]; }; MALDIrppa = derive2 { name="MALDIrppa"; version="1.0.1"; sha256="1y2nr65cvqkvzzjsr3lmpk58lqd5rqvmzjdakhwhw4s6ymggd9hf"; depends=[lattice MALDIquant robustbase signal wmtsa]; }; MAMS = derive2 { name="MAMS"; version="1.2"; sha256="19w6ydsbr60p1cmizhhmsajzasg76r23x29qcaa7mibcb5gh1yzs"; depends=[mvtnorm]; }; MAMSE = derive2 { name="MAMSE"; version="0.2-1"; sha256="0spi7fqkxjiw5j0nf7ambcr8kpzdhjzh9y3dk23y1mrk2dgc5dkw"; depends=[]; }; MANCIE = derive2 { name="MANCIE"; version="1.4"; sha256="0940xl3z5bca6hcnj2bj341l79wajilxlxzmyz3dlgrz0b3bbdmm"; depends=[]; }; MANOVA_RM = derive2 { name="MANOVA.RM"; version="0.2.1"; sha256="1pq1mkanp1jxyygw09p4x8cgfbkrks7g6qvzfdjgdy8kli1b3mmw"; depends=[ellipse magic MASS Matrix plotrix plyr]; }; - MAPA = derive2 { name="MAPA"; version="2.0.2"; sha256="1sk95zpsw6lhciyyq8jzz8mdj4gbnq5vk9z3hxbyl0v0g2rr1gqz"; depends=[forecast RColorBrewer smooth]; }; + MAPA = derive2 { name="MAPA"; version="2.0.4"; sha256="02s223s58k2jk49m0xlz3q9m3nip3h4dl4v58j18z2vgi54dwnjr"; depends=[forecast RColorBrewer smooth]; }; MAPLES = derive2 { name="MAPLES"; version="1.0"; sha256="0hzsh7z1k7qazpxjqbm9842zgdpl51irg7yfd119a7b2sd3a8li9"; depends=[mgcv]; }; MAR1 = derive2 { name="MAR1"; version="1.0"; sha256="1r6j890icl5h3m2876sakmwr3c65513xnsj68sy0y0q7xj3a039l"; depends=[bestglm leaps]; }; MARSS = derive2 { name="MARSS"; version="3.9"; sha256="0vn8axzz0nqdcl3w00waghz68z8pvfm764w11kxxigvjpw2plj31"; depends=[KFAS mvtnorm nlme]; }; MARX = derive2 { name="MARX"; version="0.1"; sha256="1yanv7q5l8ybw3mh0rvhxyqi2sp8w4b9vnas7lpqflc06j4nnv4p"; depends=[fBasics matlab stabledist tseries]; }; - MASS = derive2 { name="MASS"; version="7.3-47"; sha256="1gy6z7ly9wn86rfn9xrmqiqq1ijw3pkasrr2299kbzsgx2mwsi7d"; depends=[]; }; + MASS = derive2 { name="MASS"; version="7.3-48"; sha256="02q95ba909p2gxnzfp295ipxjnv14f7bm55nicxwn2kj8hizpzqd"; depends=[]; }; MASSTIMATE = derive2 { name="MASSTIMATE"; version="1.3"; sha256="0dsqinl6998jv63m6scljszpi0qb050gj5d4wnp0pcxfs9awi2gj"; depends=[]; }; MAT = derive2 { name="MAT"; version="2.2"; sha256="093axw2zp4i3f6s9621zwibcxrracp77xrc0q5q0m4yv3m35x908"; depends=[Rcpp RcppArmadillo]; }; MATA = derive2 { name="MATA"; version="0.3"; sha256="006mnc4wqh9vdigfzrzx4csgczi0idvlwb6r23w5mmsfbn0ysdm5"; depends=[]; }; @@ -1848,9 +1885,9 @@ in with self; { MAclinical = derive2 { name="MAclinical"; version="1.0-5"; sha256="1g0ka1kqww2xim8rp5rznkzn0a541zvf841s3lbphfh9k3y3ixs3"; depends=[e1071 party plsgenomics st]; }; MAd = derive2 { name="MAd"; version="0.8-2"; sha256="0mhys27rmzb0kal4jr8j2y44z4qq46fw260sxl8da9qqvplcwq1p"; depends=[]; }; MBA = derive2 { name="MBA"; version="0.0-9"; sha256="06kmrdkhwwvr3kd5w8ws6r528hhpvbhixyj98lv36kkwlx14x06g"; depends=[BH]; }; - MBC = derive2 { name="MBC"; version="0.10-2"; sha256="0c40k3m9z9cqk3778hwyy0i56qnsvw1dwpa6p9v097fbpacfsrg2"; depends=[energy Matrix]; }; + MBC = derive2 { name="MBC"; version="0.10-4"; sha256="1fp06xx9jpz5mcxs0yppzzhch9w9c1qbsdbb60r4izrxnrhggpf7"; depends=[energy Matrix]; }; MBCluster_Seq = derive2 { name="MBCluster.Seq"; version="1.0"; sha256="0xbi2r0g0gzsy05qrq1ljr5f5s3glwxj204vk2f1lgwdx3fd116m"; depends=[]; }; - MBESS = derive2 { name="MBESS"; version="4.4.1"; sha256="1mmx0rlnw0kk04x55dqj68cfzpsba3icj7px5x5vgwfkf6qazg94"; depends=[boot gsl lavaan MASS mnormt nlme OpenMx sem semTools]; }; + MBESS = derive2 { name="MBESS"; version="4.4.3"; sha256="03i7xpcb7xx8gzxdz3abdylga1hbyvz4k0m6bi4vkgyf4y2v6xv8"; depends=[boot gsl lavaan MASS mnormt nlme OpenMx sem semTools]; }; MBHdesign = derive2 { name="MBHdesign"; version="1.0.79"; sha256="1qz0igm8h3ij8yc9bg3vr3mkmf99h1kyxscdhkfphc66zaazhyw1"; depends=[class geometry mgcv mvtnorm randtoolbox]; }; MBI = derive2 { name="MBI"; version="1.0"; sha256="1lb0sjwa6x360n9a9pagz6yhxh37gxq1fk0f5c3i2sd56ny9jpns"; depends=[]; }; MBSGS = derive2 { name="MBSGS"; version="1.1.0"; sha256="1h5vhmpgrqza12j7ivhwgd5wyb7kkb8mjbxl5w756vyid8g03flz"; depends=[MASS MCMCpack mgcv mnormt truncnorm]; }; @@ -1858,7 +1895,7 @@ in with self; { MBmca = derive2 { name="MBmca"; version="0.0.3-5"; sha256="0p7ddpsy4hwkfwyyszidi33qpdg4xllny7g9x24gk782p7kjfgq9"; depends=[chipPCR robustbase]; }; MC2toPath = derive2 { name="MC2toPath"; version="0.0.16"; sha256="0jdn9wpxavn2wrml907v23mfxr62wwjdh7487ihjj59g434ry7wh"; depends=[RNetCDF]; }; MCAvariants = derive2 { name="MCAvariants"; version="2.0"; sha256="0akff64v49d5r0wvspal0pz17jhz1ry4vdmj47m28gzjj69zcab0"; depends=[]; }; - MCDA = derive2 { name="MCDA"; version="0.0.17"; sha256="1j9lahacdhvcvj7h32yb9fimlwfcl2q8jc7dlvnsc95wai43khfr"; depends=[combinat glpkAPI RColorBrewer Rglpk]; }; + MCDA = derive2 { name="MCDA"; version="0.0.18"; sha256="1m8kf8xxli3dbbabrcanpsmsmywf21ma0nb9jq2phz7ifgladdyi"; depends=[combinat glpkAPI RColorBrewer Rglpk]; }; MCDM = derive2 { name="MCDM"; version="1.2"; sha256="0r27y9mqvfnv1m0yi2xdyjr4y1s43d5yav960kz2xa732hrrxw01"; depends=[RankAggreg]; }; MCI = derive2 { name="MCI"; version="1.3.3"; sha256="1wn8lcr5sq3697nsmly6syb9jv7p99ks0fy933ff5rx54x3rf9hz"; depends=[]; }; MCL = derive2 { name="MCL"; version="1.0"; sha256="1w36h4vhd525h57pz6ik3abbsrvxnkcqypl2aj1ijb6wm7nfp4ri"; depends=[expm]; }; @@ -1866,9 +1903,9 @@ in with self; { MCMC_qpcr = derive2 { name="MCMC.qpcr"; version="1.2.3"; sha256="0b9n793spljmsb58jp41vnl9c753xqaw1g4wbi4ax348cvi09jk8"; depends=[coda ggplot2 MCMCglmm]; }; MCMC4Extremes = derive2 { name="MCMC4Extremes"; version="1.1"; sha256="06p6xdbja7vrdq4vnhybpkmyf4rkaihcmy9sc81sb0h2wa21vcq0"; depends=[evir]; }; MCMCglmm = derive2 { name="MCMCglmm"; version="2.25"; sha256="0crici0g6x2471kk9092f72gc6ghbwwqid3w8jsnsvy6ymmk2wih"; depends=[ape coda corpcor cubature Matrix tensorA]; }; - MCMCpack = derive2 { name="MCMCpack"; version="1.4-0"; sha256="0cz5djmf1xfv54sgwan0r6ln1mlnkpnqh2zhqkss2m3ys2v087yh"; depends=[coda lattice MASS mcmc quantreg]; }; + MCMCpack = derive2 { name="MCMCpack"; version="1.4-2"; sha256="1nizmfxyyrp0sbmyprgm97xmi3amxwix1gj7p9v0sjjklv1djap4"; depends=[coda lattice MASS mcmc quantreg]; }; MCMCprecision = derive2 { name="MCMCprecision"; version="0.3.7"; sha256="0pbyg6v478di1w9cpp2rmhr4p5ncnwmks042981snqc5gnwysjx4"; depends=[combinat Matrix Rcpp RcppArmadillo RcppEigen RcppProgress]; }; - MCMCvis = derive2 { name="MCMCvis"; version="0.8.1"; sha256="1j2b5gpd59m67r88nhgqaibjdv1gfzsa9bjjai95jqkbbklq57bn"; depends=[coda rstan]; }; + MCMCvis = derive2 { name="MCMCvis"; version="0.9.4"; sha256="0pfj14pji0dqzlq6vy76prkh8m0hj784yjr5lz3p68kviwzrk9r6"; depends=[coda overlapping rstan]; }; MCPAN = derive2 { name="MCPAN"; version="1.1-20"; sha256="0j36dhi3bf3q14bbcmrmipz2fcn6g9gsqidzm43i8x5r7hcvv2lh"; depends=[magic MCMCpack multcomp mvtnorm plyr]; }; MCPMod = derive2 { name="MCPMod"; version="1.0-10"; sha256="0ns74qhm9bzi70m9bn61zs4mmqmmxxi77f49pdrcnr8wrrnn1kdn"; depends=[lattice mvtnorm]; }; MCPerm = derive2 { name="MCPerm"; version="1.1.4"; sha256="0g65vzn43k6qrsglxd2kz245f662gl3c2gdz6qvvxa96v6q9lhh1"; depends=[metafor]; }; @@ -1877,27 +1914,26 @@ in with self; { MChtest = derive2 { name="MChtest"; version="1.0-2"; sha256="01lflilrp42m236cznn6qgzvv5v9fzpx6wcfxp3q545bw2xmbdvj"; depends=[]; }; MConjoint = derive2 { name="MConjoint"; version="0.1"; sha256="02yik28mhvd4rfqwrprdbdjx9c49ds55fh042bsjajs2ip467w5c"; depends=[]; }; MDM = derive2 { name="MDM"; version="1.3"; sha256="1bvjhl243rf19829ly1qc20ik937hb82lq23aiysj7ya55z8hdpf"; depends=[nnet]; }; - MDMR = derive2 { name="MDMR"; version="0.5.0"; sha256="185qdm39mydsb7h09j0763a13wd84h0w8rx2g0xwdynp2rakkw75"; depends=[car CompQuadForm lme4]; }; + MDMR = derive2 { name="MDMR"; version="0.5.1"; sha256="1pv57xl7pjsqxz1j8mnfmjaa36mlr749yb4c44ppdrx6khvw662x"; depends=[car CompQuadForm lme4]; }; MDPtoolbox = derive2 { name="MDPtoolbox"; version="4.0.3"; sha256="0aaw787fvcyhw6mbl42icgqfdzvfr618vg179984xqifafr40dyc"; depends=[linprog Matrix]; }; MDR = derive2 { name="MDR"; version="1.2"; sha256="0g2fvvcwagml6635va87nc0ijzy0pypx5aqzz7mf5w13j0wpm24y"; depends=[lattice]; }; + MDSMap = derive2 { name="MDSMap"; version="1.0"; sha256="15557ca83bvsqcmsa48vispagg9a05658i22cqk706shjsp782n5"; depends=[princurve reshape rgl smacof]; }; MDimNormn = derive2 { name="MDimNormn"; version="0.8.0"; sha256="080m0irx5v8l45fg9ig5yzcj92s3ah8a9aha288byszli1cchgpn"; depends=[]; }; MDplot = derive2 { name="MDplot"; version="1.0.1"; sha256="1xijh18hrkb807nfkdr7g642aspn5psc8nw29q387jl5hly2w8s9"; depends=[gplots gtools MASS RColorBrewer]; }; MEET = derive2 { name="MEET"; version="5.1.1"; sha256="02xz2zkwqaf1wck9a3h1j6z8dasw4j0zqa88jg6h10wqzcrlp9ba"; depends=[Hmisc KernSmooth Matrix pcaMethods ROCR seqinr seqLogo]; }; MEGENA = derive2 { name="MEGENA"; version="1.3.6"; sha256="0ylv7kbk0x3rm08aiwci4p3kma08qj4szlw2h1d6wcqmipy93v8s"; depends=[BH cluster doParallel foreach fpc ggplot2 ggrepel igraph Matrix Rcpp reshape]; }; MEMSS = derive2 { name="MEMSS"; version="0.9-2"; sha256="0wyw8yjs4miwgwdfcnfbzvkxrgv5r3jlg3cg8q2vy7s69wvhksmy"; depends=[lme4]; }; MEPDF = derive2 { name="MEPDF"; version="1.0"; sha256="171pzhz4z0373663mfnfi5cqd9gnj0aamwr56ag16dxm8xfyppcj"; depends=[MASS plyr pracma]; }; - MESS = derive2 { name="MESS"; version="0.4-15"; sha256="0cfhbl099znjyij6sfhp5ma7yk1cj20paqixdy8lrif31mgkibd0"; depends=[geeM geepack glmnet kinship2 MASS Matrix mvtnorm Rcpp RcppArmadillo]; }; + MESS = derive2 { name="MESS"; version="0.5.0"; sha256="1khm9x7kk68xcnjm9iij1s5zvj8n6dp1iwyp2y8fcv12qnvrjpbc"; depends=[geeM geepack glmnet kinship2 MASS Matrix mvtnorm Rcpp RcppArmadillo]; }; MEclustnet = derive2 { name="MEclustnet"; version="1.1"; sha256="1ayyrxdb9qd7fxnr8y2lbjcd2c8m38mjm1ks6z22vyddbhkf78in"; depends=[e1071 ellipse latentnet MASS mclust mvtnorm nnet vegan]; }; MExPosition = derive2 { name="MExPosition"; version="2.0.3"; sha256="1l27wp0psfvlkk79fhb8ypf8awardjljg1f37yj42friy9pdfksz"; depends=[ExPosition prettyGraphs]; }; MF = derive2 { name="MF"; version="4.3.2"; sha256="1arnhyqf1cjvngygcpqk2g4d52949rhkjmclbaskyxcrvp62qln0"; depends=[]; }; MFAg = derive2 { name="MFAg"; version="1.4"; sha256="092zbl2pxbsvfyf3qssbid14194p0ax2zrw0gzpyqwzdpx0brrlb"; depends=[]; }; MFHD = derive2 { name="MFHD"; version="0.0.1"; sha256="0gb8y297y1x03wy46530psmlawyv4z5dydilk36qcmadlk1wx02k"; depends=[deldir depth depthTools fda_usc matrixStats]; }; MFKnockoffs = derive2 { name="MFKnockoffs"; version="0.9.1"; sha256="1bcdqfzmllp3dri1phy365wgc9c37wlag65pzljn4p3mf43w10nq"; depends=[corpcor glmnet gtools Matrix Rdsdp RSpectra]; }; - MFPCA = derive2 { name="MFPCA"; version="1.1"; sha256="1nbm8j9g36jqbalja5zcgkiy03i0pmr75hiqnhigxyy4dnp0wj4a"; depends=[abind foreach funData irlba Matrix mgcv plyr]; }; MFT = derive2 { name="MFT"; version="1.3"; sha256="029apjg1fqrqfg98jczbxfy267m3f68qxvxqjzbsw1xisq4j7wc0"; depends=[]; }; - MGGM = derive2 { name="MGGM"; version="1.0"; sha256="0j9wyshwxd7zqb60avb7dmfgnrzv2nyn983bw0g5997zixz0w6mp"; depends=[]; }; MGL = derive2 { name="MGL"; version="1.1"; sha256="03q453swnangxyc4nvjhzw2zpcy5vp1wpilap5rwymnf0c0xi4j7"; depends=[]; }; - MGLM = derive2 { name="MGLM"; version="0.0.8"; sha256="1yzi679jm7x9qkz0d3az84clkjfc7wjnxkk6n6s6ia4bnw05d5v7"; depends=[]; }; + MGLM = derive2 { name="MGLM"; version="0.1.0"; sha256="06gaz82nn7fbfv7bm9xx6dsk95xq3gircvh6knzm963r1bw8f1pk"; depends=[]; }; MGRASTer = derive2 { name="MGRASTer"; version="0.9"; sha256="0jmf2900r56v60981sabflkhid3yrqd9xd7crb56vgfl1qkva9zp"; depends=[]; }; MGSDA = derive2 { name="MGSDA"; version="1.4"; sha256="0grwl740yvz2av5nkvmyyrr8ji5f39sjs1c5gxp6lp9p36i2wc32"; depends=[MASS]; }; MHCtools = derive2 { name="MHCtools"; version="1.1.0"; sha256="03y6m3a46bzazxkrxdrii2p1fyc26il09z5676c63rk8wz9wcxa0"; depends=[rlist]; }; @@ -1922,13 +1958,14 @@ in with self; { MLDS = derive2 { name="MLDS"; version="0.4.5"; sha256="1a5y031kd6zx0zqlk6dvxzsv3isbvg9jap4gqad2jwryh0a9x3c1"; depends=[MASS]; }; MLEcens = derive2 { name="MLEcens"; version="0.1-4"; sha256="0zlmrcjraypscgs2v0w4s4hm7qccsmaz4hjsgqpn0058vx622945"; depends=[]; }; MLID = derive2 { name="MLID"; version="1.0.1"; sha256="0ygahmcfbydzic5q3h1ppv5b2ks4lh8mcyfqq27ssmn4g1n6hdvp"; depends=[lme4 nlme]; }; + MLML2R = derive2 { name="MLML2R"; version="0.1.0"; sha256="11mnwmbfs3dmjcf2bmg04rivp26021gjd56rdkzgrv439p8aq8rs"; depends=[]; }; MLPUGS = derive2 { name="MLPUGS"; version="0.2.0"; sha256="1yda37073g640g1qrkjrwa8hbyq6bjlcw3wpznx0bk5h0639bc0s"; depends=[]; }; MLRMPA = derive2 { name="MLRMPA"; version="1.0"; sha256="0gfbi70b15ivv76l3i0zlm14cq398nlny40aci3vqxxd0m2lyyx5"; depends=[ClustOfVar]; }; MLmetrics = derive2 { name="MLmetrics"; version="1.1.1"; sha256="061129b36h7xqw4zsznik694n8yy9qq6aaqfhdxkhdv8n5v1nzvp"; depends=[ROCR]; }; MM = derive2 { name="MM"; version="1.6-2"; sha256="1z7i8ggd54qjmlxw9ks686hqgm272lwwhgw2s00d9946rxhb3ffi"; depends=[emulator magic Oarray partitions]; }; MM2S = derive2 { name="MM2S"; version="1.0.5"; sha256="0h10cbsdnndllwq4cb4aamjy104ckvn01skh7rixa1iqdndac9fx"; depends=[GSVA kknn lattice pheatmap]; }; MM2Sdata = derive2 { name="MM2Sdata"; version="1.0.1"; sha256="1prx0gm9shizj45382qhja417y18jp6spk2hmgrzb7sbniyqs5pd"; depends=[Biobase]; }; - MMDai = derive2 { name="MMDai"; version="1.3.0"; sha256="1chxx06affmf6mqhnx3sni43pjwlp0q2gk3f5lxzbz5m5v81dx48"; depends=[DirichletReg]; }; + MMDai = derive2 { name="MMDai"; version="1.4.0"; sha256="0bb7hg8fkmzg87xr1b2hxhy75xi461ks6w12z85k4c77kswfpx3b"; depends=[DirichletReg]; }; MMMS = derive2 { name="MMMS"; version="0.1"; sha256="1a71vs3k16j14zgqfd4v92dq9swrb44n9zww8na6di82nla8afck"; depends=[glmnet survival]; }; MMS = derive2 { name="MMS"; version="3.00"; sha256="06909912v2hr52s8k0a0830lbmdh05dcd7k47vydhbwq3rzf3ahg"; depends=[glmnet Matrix mht]; }; MMWRweek = derive2 { name="MMWRweek"; version="0.1.1"; sha256="16dwmpj13rzxmd2x7xaakw2zq2aly7ajjbfnc39qvdzk6n2x37wn"; depends=[]; }; @@ -1936,7 +1973,7 @@ in with self; { MNP = derive2 { name="MNP"; version="3.1-0"; sha256="06qs2vsmjs6rcpqlwfc1n5y5hzxf7pngbdmiza1wijm9hh54ikh0"; depends=[MASS]; }; MNS = derive2 { name="MNS"; version="1.0"; sha256="0if46a6rw0f2d72wnykkaa5z5b1p2c0r43il6cbwbcnnb3zd8acb"; depends=[doParallel glmnet igraph MASS mvtnorm]; }; MOCCA = derive2 { name="MOCCA"; version="1.2"; sha256="04smpzn9x64w1vpw4szqa7dwnaak1ls6gpg7fgajs68mv5zivffa"; depends=[cclust clv]; }; - MODIS = derive2 { name="MODIS"; version="1.1.0"; sha256="0a0gjncbh9dskbmvl5yzzg33jxvvfrsvc3axy1r5j5nfp3hb6zn6"; depends=[bitops devtools mapdata mapedit maps ptw raster RCurl rgdal sf sp XML]; }; + MODIS = derive2 { name="MODIS"; version="1.1.2"; sha256="1iww1rnxv2xw63b5bz7xrxb3q8dmgqzbw704gshislkhjwn37q87"; depends=[bitops devtools mapdata mapedit maps maptools ptw raster RCurl rgdal rgeos sf sp XML]; }; MODISSnow = derive2 { name="MODISSnow"; version="0.1.0.0"; sha256="1p0mil074gapw6v8paw9595rzp85hxrfsc65llh0ljalmacwgx04"; depends=[gdalUtils lubridate raster RCurl]; }; MODIStsp = derive2 { name="MODIStsp"; version="1.3.3.1"; sha256="0685mrddw47428p61dw30yqdp5m0z2xh3rjfdrrdicfyx7kaii5m"; depends=[bitops data_table gdalUtils gWidgets gWidgetsRGtk2 hash httr pacman plyr raster RCurl rgdal rgeos RJSONIO sp stringr XML xts]; }; MOEADr = derive2 { name="MOEADr"; version="1.1.0"; sha256="0q0bm13v85raq5hdfpzg4v5kj12zjh31fr1x0zv9g5blxy10dqgy"; depends=[assertthat FNN]; }; @@ -1949,6 +1986,7 @@ in with self; { MPDiR = derive2 { name="MPDiR"; version="0.1-16"; sha256="10g4dnysjnzf106qibqqcrxz3xw2nfh4ck1n1dlciwahr0f80j13"; depends=[]; }; MPINet = derive2 { name="MPINet"; version="1.0"; sha256="1zw3piqhhpagg5qahc2xahxxfdwdk8w94aass1virlpl0f52ik8s"; depends=[BiasedUrn mgcv]; }; MPLikelihoodWB = derive2 { name="MPLikelihoodWB"; version="1.1"; sha256="0xgj349jkv29ldia4lmsiwnkhrk99aqcrvyiy3si5knmi1jvx9q0"; depends=[MASS survival]; }; + MPR_genotyping = derive2 { name="MPR.genotyping"; version="0.8"; sha256="0lsrbks7nhfnrmk8kclh09rc132j3divjxrzjfrg8zijbzkfx1pn"; depends=[qtl]; }; MPSEM = derive2 { name="MPSEM"; version="0.3-3"; sha256="0ir1zlg0vz0nfdair3apa737dw4078lbxyk932755d3rj0cm20c3"; depends=[ape MASS]; }; MPTinR = derive2 { name="MPTinR"; version="1.10.3"; sha256="0281w5dhg8wmi1rz80xribq437shp4m890c504kggsacr28mbhkw"; depends=[Brobdingnag numDeriv Rcpp RcppEigen]; }; MPV = derive2 { name="MPV"; version="1.38"; sha256="1w3b0lszqmsz0yqvaz56x08xmy1m5ngl9m6p2pg9pjv13k8dv190"; depends=[]; }; @@ -1958,19 +1996,19 @@ in with self; { MRH = derive2 { name="MRH"; version="2.2"; sha256="1icwlq8js58g9fkiq7fwjg8r97ca47xl3dscnhnga99gkgsfgjwl"; depends=[coda KMsurv survival]; }; MRMR = derive2 { name="MRMR"; version="0.1.4"; sha256="0dgbhlynaaka7mdzl6igwgcdzvy6cm2y8mbxaf9pfla8w3z8y0lq"; depends=[ggplot2 lmtest lubridate plyr reshape2]; }; MRQoL = derive2 { name="MRQoL"; version="1.0"; sha256="0isn4g3jpz7wm99ymrshl6zgkb7iancdzdxl2w98n8fbxsh5z6sw"; depends=[]; }; - MRS = derive2 { name="MRS"; version="1.2.2"; sha256="0l09jj8w8pyarmprfqkh993xz3s8753cy1niicfjvc5s8zs58idg"; depends=[igraph Rcpp RcppArmadillo]; }; + MRS = derive2 { name="MRS"; version="1.2.4"; sha256="1sksg70zb72ys1b7vi8amjaqarmdh8vf2l1rb0rasrlvrip3z3br"; depends=[igraph Rcpp RcppArmadillo]; }; MRSP = derive2 { name="MRSP"; version="0.4.3"; sha256="0zv22xiq3qh9x3r2ckkvq1vv0vkcirh8y87053bqvw1m20j7q1by"; depends=[Formula matrixcalc]; }; MRTSampleSize = derive2 { name="MRTSampleSize"; version="0.1.0"; sha256="1f6ivr6cx4irqkry219x4nk6k5zhp3b19axy2xbfc3dx5zixhpjl"; depends=[]; }; MRsurv = derive2 { name="MRsurv"; version="0.2"; sha256="148myzk6r8whkpv1yv59dmdlr2n8vdwmaww165aw696xfjxwq550"; depends=[mvtnorm survival]; }; MRwarping = derive2 { name="MRwarping"; version="1.0"; sha256="13bcs7rlm4irx7yzdnib558w9014a4chh9xwc010m6pxvxv36qnv"; depends=[boa SemiPar]; }; MSBVAR = derive2 { name="MSBVAR"; version="0.9-3"; sha256="0ybkkl3hfff2jgz4a0z105bb0v6jl4dkkqmdg382and8w0mc496c"; depends=[bit coda KernSmooth lattice mvtnorm xtable]; }; - MSCMT = derive2 { name="MSCMT"; version="1.3.0"; sha256="0rwhfk6dh10zn1zgjamwx23j8i9kw1p6yzfgxj5ch7w3d3yzhrbf"; depends=[ggplot2 lpSolve lpSolveAPI Rdpack Rglpk]; }; + MSCMT = derive2 { name="MSCMT"; version="1.3.2"; sha256="00s4wwggc70w6cg94ff853jnw5hcln6i0719n4xr92cpxaa7irnw"; depends=[ggplot2 lpSolve lpSolveAPI Rdpack Rglpk]; }; MSG = derive2 { name="MSG"; version="0.3"; sha256="181kzkbw69bs3vir6dzgq7jzp8xcpg1p4isfb660vgnd1flb03ix"; depends=[RColorBrewer]; }; MSGARCH = derive2 { name="MSGARCH"; version="2.0"; sha256="16mzsdb5dsbg5sjnmg1clqqy505wx87wgkwc3yzd0i6by681jwq6"; depends=[coda expm fanplot MASS numDeriv Rcpp RcppArmadillo zoo]; }; MSGLasso = derive2 { name="MSGLasso"; version="2.1"; sha256="1k17vnvzr647pwfbdxrpqcsp34iygq86wf0ns4rq8cj6q5mik1bv"; depends=[]; }; MSIseq = derive2 { name="MSIseq"; version="1.0.0"; sha256="1v2why1k6pjsc04044nr74571p7541nciq7xkzmya3jq6dw878j3"; depends=[IRanges R_utils rJava RWeka]; }; MSQC = derive2 { name="MSQC"; version="1.0.2"; sha256="11wcy04cpjlnc71s2svs4lm1cp718dz1p4a1603x6zwpbf22bygn"; depends=[rgl]; }; - MST = derive2 { name="MST"; version="2.0"; sha256="131c98lzy1cs1gbv20nv9r6yhlyyhk43hh1mrx12k1cgw299265k"; depends=[Formula MASS partykit survival]; }; + MST = derive2 { name="MST"; version="2.1"; sha256="16mnsn2an02k4jrqb6yj0n1i563zny5v10ngfq1y28fqaw6h8yyq"; depends=[Formula MASS partykit survival]; }; MSbox = derive2 { name="MSbox"; version="1.0"; sha256="0r6bvw7ddb8lvz5cjvcng9vkc6pn765xgd4bws594jyc0avm0jkx"; depends=[stringr]; }; MScombine = derive2 { name="MScombine"; version="1.1"; sha256="0kgz1l4jlhcada3fp02dscf4zx6a22cjxj251838lfz65f512hrn"; depends=[plyr]; }; MSeasy = derive2 { name="MSeasy"; version="5.3.3"; sha256="191mvg1imxfjlnd808ypn4lsjx7n6ydf16flax79hv01z7rcjylh"; depends=[amap cluster clValid fpc mzR xcms]; }; @@ -1984,7 +2022,7 @@ in with self; { MTurkR = derive2 { name="MTurkR"; version="0.8.0"; sha256="0q498chr2s67ai7lfxi6kdficqbs5sxj9asyv69z2a37fmsr4va7"; depends=[base64enc curl digest XML]; }; MTurkRGUI = derive2 { name="MTurkRGUI"; version="0.1.5"; sha256="1rlgz80na0v1nx70cda1fzyswlb1lg5kcx64zl9dcqy6accsrpmp"; depends=[curl MTurkR XML]; }; MUCflights = derive2 { name="MUCflights"; version="0.0-3"; sha256="03ksvv5nyzlqiml1nz405r3yqb2cl35kpm1h61zcv2nqq8cxqshs"; depends=[geosphere NightDay RSQLite sp XML]; }; - MUS = derive2 { name="MUS"; version="0.1.4"; sha256="0h65gmxi65qax0qky7667p1jzi8y4pdncaa899d1nb0gvg9x0yh2"; depends=[]; }; + MUS = derive2 { name="MUS"; version="0.1.5"; sha256="1vjfd9jhjs8llkqsdaynrlny93mb8y7wifg6cdjmnaq5fm9gyv9j"; depends=[]; }; MVA = derive2 { name="MVA"; version="1.0-6"; sha256="09j9frr6jshs6mapqk28bd5jkxnr1ghmmbv6f4zz0lrg81zjizl3"; depends=[HSAUR2]; }; MVB = derive2 { name="MVB"; version="1.1"; sha256="0an8b594rknlcz6zxjva6br8f34sgwdi2jil3xh1xzb5fa55dw0f"; depends=[Rcpp RcppArmadillo]; }; MVLM = derive2 { name="MVLM"; version="0.1.4"; sha256="1zcj405dc4jbiqw6p0fcbam8yc9d6yjpmrx5wjw5zjvig3iqb91k"; depends=[CompQuadForm]; }; @@ -1995,7 +2033,7 @@ in with self; { MVisAGe = derive2 { name="MVisAGe"; version="0.2.0"; sha256="18w3qf85l81sbxhzxs61jbsng14lbd8vzvbprq0ywkxb2lsq16n2"; depends=[]; }; MWLasso = derive2 { name="MWLasso"; version="1.3.1"; sha256="11lyk46lmjcd60q0mixi41b8ybjgyp1xi18g3ag4450xyhw3r17s"; depends=[]; }; MWRidge = derive2 { name="MWRidge"; version="1.0.0"; sha256="17kvs9npr1ff24z3pv9x2qnfwyy6w3hc7hm60ynzbjlk2rr11xr9"; depends=[glmnet]; }; - MXM = derive2 { name="MXM"; version="1.3.0"; sha256="0hjwv271qvqf6b3yb2hb1pss4ssf36gkwx9m3c9mb4c126iam8c7"; depends=[doParallel energy foreach hash lme4 MASS nnet ordinal quantreg relations Rfast speedglm survival visNetwork]; }; + MXM = derive2 { name="MXM"; version="1.3.2"; sha256="0d3x773870ky6q36g6skcyfvywrwc264f5g55sh3229c6qpjgzq2"; depends=[doParallel energy foreach geepack hash lme4 MASS nnet ordinal quantreg relations Rfast survival visNetwork]; }; MaXact = derive2 { name="MaXact"; version="0.2.1"; sha256="1n7af7kg54jbr09qk2a8gb9cjh25cnxzj2snscpn8sr8cmcrij0i"; depends=[mnormt]; }; Maeswrap = derive2 { name="Maeswrap"; version="1.7"; sha256="0cnnr5zq7ax1j7dx7ira7iccqppc6qpdjghjarvdb2zj0lf69yyb"; depends=[geometry lattice rgl stringr]; }; MagneticMap = derive2 { name="MagneticMap"; version="1.0"; sha256="1634bk6x92z01gyiy89c1g6z5cjsj8pf4f358y7rk2kppmfz4cf7"; depends=[scatterplot3d]; }; @@ -2008,10 +2046,10 @@ in with self; { MapGAM = derive2 { name="MapGAM"; version="1.0"; sha256="1hzv3sy2szxl4fhnnzlwagh3qm4z22cbhiwi8whgn5ymwlnw0pca"; depends=[gam maptools sp survival]; }; MareyMap = derive2 { name="MareyMap"; version="1.3.4"; sha256="1wap0syzgd0w3xla2x4bcasn8zzlj63r5yyf9r479nvifjxdqxzz"; depends=[tkrplot]; }; MarkowitzR = derive2 { name="MarkowitzR"; version="0.9900.0"; sha256="1wyqlgmb376dsvx7nixpbynjzp7xpmsh4fx9s7nai6fhjb50mxha"; depends=[gtools matrixcalc sandwich]; }; - Massign = derive2 { name="Massign"; version="1.0.0"; sha256="08zxkic9r5l540lsswv15fcrkdfigjs9ajy5gs63xxgmnsxj25bp"; depends=[]; }; + Massign = derive2 { name="Massign"; version="1.1.0"; sha256="09i32lsrx40rxrnb9alfipfrkipy4mza5nr4gcpn2a5h86ak9290"; depends=[]; }; MasterBayes = derive2 { name="MasterBayes"; version="2.55"; sha256="14532l41x5k3z2qg0vklafqyzmn45qny9hlrrgriykajv3xjf2lz"; depends=[coda genetics gtools kinship2]; }; - MatManlyMix = derive2 { name="MatManlyMix"; version="0.1.2"; sha256="08iny27gsf89r7c938nx8pmkivkiyrsq7za9ijamz61cf4kyawcl"; depends=[]; }; - MatchIt = derive2 { name="MatchIt"; version="3.0.1"; sha256="0iifn286ssdavpg3ajlmd5z7n5wn0rsj3l23xf6qnvij35k95kbw"; depends=[MASS Matching rgenoud]; }; + MatManlyMix = derive2 { name="MatManlyMix"; version="1.1.1"; sha256="1d2vd5b9lirdybjclxh0nn4mghq64qjj4l8vnj95cni5pfa18a2c"; depends=[]; }; + MatchIt = derive2 { name="MatchIt"; version="3.0.2"; sha256="1pp91pw2sy9hik4sgn4gcsp40hb01n9pfccrwdcffwji5fd1aavq"; depends=[MASS Matching]; }; MatchItSE = derive2 { name="MatchItSE"; version="1.0"; sha256="01ghv3hdlsx6ypvsh7k0mi20yc8vg7z602mhcprhhh97qsb81v6h"; depends=[Rcpp RcppArmadillo]; }; MatchLinReg = derive2 { name="MatchLinReg"; version="0.7.0"; sha256="015s3xdaj56prq8lsdry3ibjkrb6gg0fwgzjh496gdx5axvpbk8g"; depends=[Hmisc Matching]; }; Matching = derive2 { name="Matching"; version="4.9-2"; sha256="0lv5b41l797c4bl2rzmdqzjnn47zpvvcv3md3xwxvvz5knxky5x4"; depends=[MASS]; }; @@ -2019,53 +2057,52 @@ in with self; { Matrix = derive2 { name="Matrix"; version="1.2-12"; sha256="1wm45hg4x5ay15y03k6rmgkd1n9r01da72mszk24vafwd7pimr8n"; depends=[lattice]; }; Matrix_utils = derive2 { name="Matrix.utils"; version="0.9.6"; sha256="0aa225y6vqm0dqjfppfrc43wbq3ks9aszhmy73xbai2v12sh439g"; depends=[grr Matrix]; }; MatrixCorrelation = derive2 { name="MatrixCorrelation"; version="0.9.2"; sha256="0s4gxgl6fsy0fnjmsdz4k7p96vl6p00xl9w2fg7v0gikjpz6h5bg"; depends=[plotrix pracma progress Rcpp RcppArmadillo RSpectra]; }; - MatrixEQTL = derive2 { name="MatrixEQTL"; version="2.1.1"; sha256="1bvfhzhvm1psgq51kpjcpp7bidaxcrxdigmv6abfi3jk5kyzn5ik"; depends=[]; }; + MatrixEQTL = derive2 { name="MatrixEQTL"; version="2.2"; sha256="1205jxx5aj783r2dmpawiq4rr30b60fq1qf053i7wylw07pz6vba"; depends=[]; }; MatrixLDA = derive2 { name="MatrixLDA"; version="0.1"; sha256="19q6wl8fc6jzn7544qnlpzfh9v0xlg9cr78l6k8kx6kzjnbnyh9z"; depends=[glasso plyr Rcpp RcppArmadillo]; }; MatrixModels = derive2 { name="MatrixModels"; version="0.4-1"; sha256="0cyfvhci2p1vr2x52ymkyqqs63x1qchn856dh2j94yb93r08x1zy"; depends=[Matrix]; }; MaxPro = derive2 { name="MaxPro"; version="3.1-2"; sha256="1y2g8a8yvzb24dj0z82nzfr6ylplb9sbi2dmj7f3pb4s3yr5zm8y"; depends=[nloptr]; }; MaxSkew = derive2 { name="MaxSkew"; version="1.1"; sha256="0x5x0jpvhp189jnmgh6d1h3ya0dicj5qfcrgr2fhp1v8jjhl125m"; depends=[]; }; - MazamaSpatialUtils = derive2 { name="MazamaSpatialUtils"; version="0.5.1"; sha256="1c5lba3v7agl6wvgnr7af3raxpl9jaffk0ri20jn3gn5mq3bpjrk"; depends=[dplyr lubridate rgdal rgeos rmapshaper rvest sp stringr xml2]; }; - MazamaWebUtils = derive2 { name="MazamaWebUtils"; version="0.1.4"; sha256="06k6jgqnvx67k132y54n44fmlyfq9wsj9n1xdgs6zv8mwmdcwp6l"; depends=[dplyr futile_logger stringr webutils]; }; + MaxentVariableSelection = derive2 { name="MaxentVariableSelection"; version="1.0-3"; sha256="1cmxfdkm5k85b4ivlfy5521hkfj0gq2pb1qlxxklh0fprw87kp9c"; depends=[ggplot2 raster]; }; + MazamaSpatialUtils = derive2 { name="MazamaSpatialUtils"; version="0.5.2"; sha256="0k64yzn7qnjxkxxqg5yrgq1ksdp37qfx0yc8a2n1zrdwj9f9ba2i"; depends=[dplyr lubridate rgdal rgeos rmapshaper rvest sp stringr xml2]; }; + MazamaWebUtils = derive2 { name="MazamaWebUtils"; version="0.1.5"; sha256="065l1n2nr5jsc0mdlxj10plzp8m09025hzbd8if3pn6gsl520b6l"; depends=[dplyr futile_logger stringr webutils]; }; McSpatial = derive2 { name="McSpatial"; version="2.0"; sha256="18nmdzhszqcb5z9g8r9whxgsa0w3g7fk7852sgbahzyw750k95n4"; depends=[lattice locfit maptools quantreg RANN SparseM]; }; - Mcomp = derive2 { name="Mcomp"; version="2.6"; sha256="01m2kawkxs9k7va3bvv7bknl4y13rhy8zczc093f10msgy6nqncl"; depends=[forecast ggplot2]; }; + Mcomp = derive2 { name="Mcomp"; version="2.7"; sha256="1bv88z0cy2ark9i8wggxj101bygpsfkaxql5k0g7m90jlq8b4xr1"; depends=[forecast ggplot2]; }; MeanShift = derive2 { name="MeanShift"; version="1.1-1"; sha256="02zf27xvk2zlmgxfyl5pwl2rdq8c30fb52x1mbpvlhmxjbhg6fsn"; depends=[wavethresh]; }; MedDietCalc = derive2 { name="MedDietCalc"; version="0.1.0"; sha256="1gggia97ww4kiqhh2lnsmadgdxvpr36mdx1yrbgarj0sp6ilrd3l"; depends=[]; }; MedOr = derive2 { name="MedOr"; version="0.1"; sha256="1rwc14s16lnzgb78ac2017hv9pss7zw7nw3y7vrvq1qx4fgiw6f8"; depends=[]; }; MediaK = derive2 { name="MediaK"; version="1.0"; sha256="19cmxl2wksw9kvjsfn1m4nkr5gpcx6bk0sqrabj1n0dla1l32v2a"; depends=[Rcpp RcppEigen]; }; - Mediana = derive2 { name="Mediana"; version="1.0.5"; sha256="1hxla0678ilwkm27pxz97794hxz2qxhw557swskhvnybcxq80752"; depends=[doParallel doRNG foreach MASS mvtnorm ReporteRs survival]; }; + Mediana = derive2 { name="Mediana"; version="1.0.6"; sha256="0cx2bkz5m96dirqknfsi9944rhnn14wwdimw1hq1p8c073z40i7a"; depends=[doParallel doRNG foreach MASS mvtnorm survival]; }; Mega2R = derive2 { name="Mega2R"; version="1.0.0"; sha256="1rprbn7pkp0haahf34d1w7pmzn6hv8ci93gfp68hpyxxi6qm61g0"; depends=[AnnotationDbi DBI GenABEL GenomeInfoDb pedgene Rcpp RSQLite SKAT]; }; - Meiosis = derive2 { name="Meiosis"; version="1.0.2"; sha256="1qjn3017xi6js75b9wq7vp6ail5dpbacraj1my3icaggdcbjc45g"; depends=[BH Rcpp]; }; MendelianRandomization = derive2 { name="MendelianRandomization"; version="0.2.2"; sha256="0hwmixcby68a6p6vrq0jy9g6ky26q94haz7m9drzf50zzkv5df0g"; depends=[ggplot2 knitr plotly rmarkdown robustbase stargazer]; }; MenuCollection = derive2 { name="MenuCollection"; version="1.2"; sha256="0v3flicfnln9qld150yk3rfldvsr4dllhq80l02n1lq6px38nf2s"; depends=[gplots RGtk2 RGtk2Extras]; }; MergeGUI = derive2 { name="MergeGUI"; version="0.2-1"; sha256="1hx03qv5jyjjmqdvylc3kz5dl5qsdqwlirjbrnxrw7grkgkhygap"; depends=[cairoDevice ggplot2 gWidgetsRGtk2 rpart]; }; MetABEL = derive2 { name="MetABEL"; version="0.2-0"; sha256="0rqjv85mgswrbbp8b8ip6cdmz0cvfy9lm5mcr8a7h38rzgx3g3i3"; depends=[]; }; - MetFns = derive2 { name="MetFns"; version="3.1.0"; sha256="1zk7mrw9yxhwj19whq1055rmf27kf41pl7x2dvjjld1rs0mny3ii"; depends=[astroFns lubridate plotrix pracma]; }; + MetFns = derive2 { name="MetFns"; version="3.2.0"; sha256="1nm7yv0cl0kl9dn284fja8a9lf77a2xaqv6v53b2f9sravj5pkfv"; depends=[astroFns lubridate plotrix pracma]; }; MetNorm = derive2 { name="MetNorm"; version="0.1"; sha256="0vfi3k0yp2dz47gwj1n1avs3ji0a2nlrrljz5d0l66zfh4474jb4"; depends=[]; }; MetProc = derive2 { name="MetProc"; version="1.0.1"; sha256="1z6538pij1rq5wv9s8rjcn0sck15y26asv4vamav8a6s4135ia3q"; depends=[fastcluster gplots]; }; MetSizeR = derive2 { name="MetSizeR"; version="1.1"; sha256="11hdmpvnszr6pn9ihb3zjy9miksz1fs4piry153z4dic8pjydkax"; depends=[cairoDevice gWidgets gWidgetsRGtk2 MetabolAnalyze mvtnorm]; }; MetStaT = derive2 { name="MetStaT"; version="1.0"; sha256="0400gx6i8xlkm51da98ap91c3hgrkgfgxswn0plaxfry3625khkp"; depends=[abind MASS pls]; }; MetaAnalyser = derive2 { name="MetaAnalyser"; version="0.2.1"; sha256="0k58325nb7svihhpga7kdbryr9bi5470qsb8aa5llpiggs8j7sfz"; depends=[DT ggvis rstudioapi shiny]; }; - MetaComp = derive2 { name="MetaComp"; version="1.0.1"; sha256="11h0b62c54vgvdnxfjg233ripyfpi4b1d9lkpkc09d8jifhbga7q"; depends=[Cairo data_table dplyr ggplot2 plyr reshape2]; }; + MetaComp = derive2 { name="MetaComp"; version="1.1.1"; sha256="0ndnjpg0c9k4171n190qwxmy79kw2ax4y5ap4xvaf0x561p072l6"; depends=[Cairo data_table dplyr ggplot2 plyr reshape2]; }; MetaCycle = derive2 { name="MetaCycle"; version="1.1.0"; sha256="1kzdk21xpbvwibs8501zwdb9lzj7g5nv2zqaskg9x0szshhg8vpp"; depends=[gnm]; }; - MetaDE = derive2 { name="MetaDE"; version="1.0.5"; sha256="1ijg64bri5jn2d3d13q1gvvfyqmbh6gn0lk6dkihixf0jwvjdyqi"; depends=[Biobase combinat impute survival]; }; MetaIntegrator = derive2 { name="MetaIntegrator"; version="1.0.3"; sha256="0611k497ixy0f51lmqzs08zqqq5krrxrm7m0xqdl18gkwrw3w656"; depends=[Biobase DBI GEOmetadb GEOquery ggplot2 gplots multtest preprocessCore reshape rmeta Rmisc RMySQL RSQLite stringr]; }; - MetaLandSim = derive2 { name="MetaLandSim"; version="0.5.6"; sha256="1hrgq15qgi26qdiz9iwkhf98nlzx86d3980z717w3gl1yr3i9kal"; depends=[e1071 fgui googleVis igraph maptools minpack_lm raster rgeos rgrass7 sp spatstat zipfR]; }; - MetaLonDA = derive2 { name="MetaLonDA"; version="1.0.5"; sha256="08f40d0wpmi7nxvmfanzavagk2x239gwkzwdxi2nbwncpidvkm94"; depends=[caTools DESeq2 doParallel edgeR ggplot2 gss metagenomeSeq plyr]; }; + MetaLandSim = derive2 { name="MetaLandSim"; version="1.0.1"; sha256="1m7h1bdk172zjx7xxlh4lac17ndx28vjpvdkyb352j5f4r4aq09g"; depends=[coda e1071 fgui googleVis igraph knitr maptools minpack_lm raster rgeos rgrass7 sp spatstat zipfR]; }; + MetaLonDA = derive2 { name="MetaLonDA"; version="1.0.9"; sha256="1iy7p91ln48fhym7gna8xmqrva6fcwxapqcyh1h6hqr0h3j392qd"; depends=[caTools DESeq2 doParallel edgeR ggplot2 gss metagenomeSeq plyr]; }; MetaPCA = derive2 { name="MetaPCA"; version="0.1.4"; sha256="14g4v3hyxnds4l2q36mpz282yqg8ahgdw3b0qmj0xg17krrf5l2s"; depends=[foreach]; }; MetaPath = derive2 { name="MetaPath"; version="1.0"; sha256="1vvpfv6yc4rd4apqfs2yzm97xxsv43ghwqnjq6w1xrc4pdx2p634"; depends=[Biobase genefilter GSEABase impute]; }; MetaQC = derive2 { name="MetaQC"; version="0.1.13"; sha256="11595ggjr46z6xiwmhiyx1sydaq68l18y7mgdwxsg81g03ck9x1r"; depends=[foreach iterators proto]; }; MetaSKAT = derive2 { name="MetaSKAT"; version="0.60"; sha256="13qffirv0lnj0bflzjpr2hd0d8j4bkakyfjvicp40f0v4v3cack2"; depends=[SKAT]; }; - MetaSubtract = derive2 { name="MetaSubtract"; version="1.2"; sha256="1alp28j8i4aga6134ls2a3j2c7rdndjg88gqn1slkjn4qzqb0bvk"; depends=[]; }; + MetaSubtract = derive2 { name="MetaSubtract"; version="1.3"; sha256="0z7l666n3whfs5zqjqlq1aa10f1h4mv1di0alksllkijfi6pcnzq"; depends=[]; }; MetaboList = derive2 { name="MetaboList"; version="1.2"; sha256="15wkj29s1mxi1wzqzlh8lkr5jkw15dbc37h3hzsc0r72a3ddzf38"; depends=[enviPick]; }; MetaboQC = derive2 { name="MetaboQC"; version="1.0"; sha256="1hm0ndwda1ciyyg8igkpaalvvdyd7aq5wnl9gzza8fr1l9fxp4a2"; depends=[plyr]; }; MetabolAnalyze = derive2 { name="MetabolAnalyze"; version="1.3"; sha256="0cl76x6imx4a95wd74xx5s8i2vg8wq3inqgakvgzmkwxad6qhrqp"; depends=[ellipse gplots gtools mclust mvtnorm]; }; MetaheuristicFPA = derive2 { name="MetaheuristicFPA"; version="1.0"; sha256="096k866mgrdgj55rzvdj080z80hzlj0667mydpz7gjaqdfriw8jg"; depends=[Rcpp RcppArmadillo]; }; + MetamapsDB = derive2 { name="MetamapsDB"; version="0.0.2"; sha256="0y5szb52karxcqr1f9mb050awprbk1ynckr987aw3d4ia6i9gcif"; depends=[base64enc cluster data_table DBI dplyr forcats future GenomicRanges ggplot2 gridExtra httr igraph IRanges lubridate magrittr Matrix purrr RCurl rgexf RJSONIO RSQLite shiny ShortRead stringr tidyr zoo]; }; Metatron = derive2 { name="Metatron"; version="0.1-1"; sha256="0apz2k3za19px1bcg4ls0axaljrpxnqhs86b6s862c370sspc1x8"; depends=[lme4 Matrix mpt]; }; Meth27QC = derive2 { name="Meth27QC"; version="1.1"; sha256="0ad30svs2kjzmmyvcm0jmv64iyq7slp1x1xl35h2rv1b6zbd4658"; depends=[gplots]; }; MethComp = derive2 { name="MethComp"; version="1.22.2"; sha256="0f9l36d00x054yqgbw0dckc7ldlgap6vnbb03n6n5yz47xxg0ic3"; depends=[nlme]; }; MethodCompare = derive2 { name="MethodCompare"; version="0.1.0"; sha256="0zl20v8k8bhn3skbpzdiglywrqghwf0r42q2jn8zmq4x0drvjzpl"; depends=[nlme]; }; Methplot = derive2 { name="Methplot"; version="1.0"; sha256="0aaqss9zfn55qi45jffxkksnkw510npjnkygafx49vl77bkagqh5"; depends=[ggplot2 reshape]; }; - MethyBayes = derive2 { name="MethyBayes"; version="0.1.0"; sha256="1ibjmnfx3d2hw6gjcyig6kv4q7p26am2xvj14ksjv9kglw2q4g1b"; depends=[]; }; MethylCapSig = derive2 { name="MethylCapSig"; version="1.0.1"; sha256="16ch9aldr6a9jn42h387n7qvnzs0yx28f2yj6xq0kp476q7rf4ql"; depends=[geepack]; }; Metrics = derive2 { name="Metrics"; version="0.1.3"; sha256="1mpqbi1lihxgndfpm8b6c5hiibvnscz1b5xjgi16x2fqk3cz4i0z"; depends=[]; }; MfUSampler = derive2 { name="MfUSampler"; version="1.0.4"; sha256="0i5siq1jacxbfvakb97qnj3h7pk471rrx8ckwm0d8nl3j586s36y"; depends=[ars coda HI]; }; @@ -2081,12 +2118,12 @@ in with self; { MigClim = derive2 { name="MigClim"; version="1.6"; sha256="171pnalidyw0v2fcjdc3kyrq5kg035kwj5xl8zwgn3hlanpaljvp"; depends=[raster SDMTools]; }; MindOnStats = derive2 { name="MindOnStats"; version="0.11"; sha256="13995v4n0hfb53w02jk81pl7nazkvqwwv87y1sr99jr9ppzc08mz"; depends=[]; }; Miney = derive2 { name="Miney"; version="0.1"; sha256="0sgln0653rgglinr8rns5s2az0lgyp9slmynyhhhs265grkhrfj0"; depends=[]; }; + Miso = derive2 { name="Miso"; version="0.1.1"; sha256="151klf07k5f670ssclg6bba18vfamyclz1sq3x0l9bzdvkng0lak"; depends=[S4Vectors]; }; MissMech = derive2 { name="MissMech"; version="1.0.2"; sha256="1b7i1balfl1cqr3l4l4wxlahk2gmawzv9rhyibwzf0yp60cb1sv9"; depends=[]; }; MissingDataGUI = derive2 { name="MissingDataGUI"; version="0.2-5"; sha256="0drbm87ka17avg6fmswjilgnz9c3azwd0236s8yfms24k9k77vnd"; depends=[cairoDevice GGally ggplot2 gWidgetsRGtk2 reshape]; }; MitISEM = derive2 { name="MitISEM"; version="1.2"; sha256="0dn398vrxh16gmy7ghh5000dgk7cbhb3gi3myrxp5dfri3ysjxcj"; depends=[mvtnorm]; }; MittagLeffleR = derive2 { name="MittagLeffleR"; version="0.2.0"; sha256="1r6hamc4vanxdbmp37ib20drw49c4vxkskqb93qlagaqxgr9xch0"; depends=[stabledist]; }; - MixAll = derive2 { name="MixAll"; version="1.2.0"; sha256="09wwisdwgvcsnvb9jdr0p0gyai5ab06yjyqhac1i7jg6wa2r8m3g"; depends=[Rcpp rtkore]; }; - MixGHD = derive2 { name="MixGHD"; version="2.1"; sha256="0f3ppj18acvr35dbgqibmpd58cymq3baw3jdrl4ranlk0nj6h26r"; depends=[Bessel cluster e1071 ghyp MASS mixture mvtnorm numDeriv]; }; + MixGHD = derive2 { name="MixGHD"; version="2.2"; sha256="1cq6mar6h56nscnd7xs6spf45mlqp48lssw2i57zfvi75f6s70p4"; depends=[Bessel cluster e1071 ghyp MASS mixture mvtnorm numDeriv]; }; MixMAP = derive2 { name="MixMAP"; version="1.3.4"; sha256="0gxghym5ghbyxf589hda2fhv5l3x5jvm6i40x5xdwx4hadcn8k9a"; depends=[lme4]; }; MixRF = derive2 { name="MixRF"; version="1.0"; sha256="1av1wx7wmfc3z8a4bc6g3i3b807nc28n3s2rs3yh0rcwq1pfl0ir"; depends=[doParallel foreach lme4 randomForest]; }; MixSIAR = derive2 { name="MixSIAR"; version="3.1.7"; sha256="0myn50sdmp83bhzm66sa61xwxv3lka427mv1ynhqshaqrb5flj35"; depends=[coda compositions ggmcmc ggplot2 lattice MASS R2jags RColorBrewer reshape reshape2 rjags]; }; @@ -2098,7 +2135,7 @@ in with self; { MixtureInf = derive2 { name="MixtureInf"; version="1.1"; sha256="12qcflmrpzh4w5b40xq5qicks6p0cwqpf5k84pwabkjb168afddv"; depends=[quadprog]; }; MixtureRegLTIC = derive2 { name="MixtureRegLTIC"; version="1.0.0"; sha256="052gyk4gqv49fa2rxbxnib29f1vjxiw4q8llkfhsv8kw5pw38699"; depends=[]; }; MlBayesOpt = derive2 { name="MlBayesOpt"; version="0.3.3"; sha256="0aazcf94gckgxd51r21hv3msa18br5xcq8xp03w448di546qzbnn"; depends=[data_table dplyr e1071 foreach Matrix ranger rBayesianOptimization rlang xgboost]; }; - MoEClust = derive2 { name="MoEClust"; version="1.0.0"; sha256="0xnhf1d9mqrym3xh2dmn2bl4mpf1r7c7924dbi9r1v9zx81myjwb"; depends=[lattice matrixStats mclust mvnfast nnet vcd]; }; + MoEClust = derive2 { name="MoEClust"; version="1.1.0"; sha256="1442x2ajiib1fgj6bc3zlqy9q3bjnhnn29f7fjin99lq7c5r132p"; depends=[lattice matrixStats mclust mvnfast nnet vcd]; }; MoLE = derive2 { name="MoLE"; version="1.0.1"; sha256="0bq19vwqjn5hl4mw5imkydbp39gal992vnh2dwrq8bb8cmj3qh91"; depends=[]; }; MoTBFs = derive2 { name="MoTBFs"; version="1.0"; sha256="09ymfgw6psc1y0dczvsrsw5cki58wn0d8vj56ydfylrxn24g3jfq"; depends=[bnlearn lpSolve quadprog]; }; Mobilize = derive2 { name="Mobilize"; version="2.16-4"; sha256="16vdvpwspa0igb52zvzyk0if9l4wq1hm8y42572i8sh1m82wyyfs"; depends=[ggplot2 Ohmage reshape2 wordcloud]; }; @@ -2107,24 +2144,27 @@ in with self; { ModelMap = derive2 { name="ModelMap"; version="3.3.5"; sha256="1rmm1a2nw91kzvxpvq9qhlag0dhihis7mgscgslqia6z8fr86qvs"; depends=[corrplot fields HandTill2001 mgcv PresenceAbsence randomForest raster rgdal]; }; ModelMetrics = derive2 { name="ModelMetrics"; version="1.1.0"; sha256="119xxmzb5biq7k1yxqsf0jmmarmfn6lds9x9hfgv593xlpym6za8"; depends=[Rcpp]; }; Modeler = derive2 { name="Modeler"; version="3.4.2"; sha256="0zf3z3y4w1jixmcbhkgrjh4dx7x3bfi66hrbzsxyfp7abk0p2d6l"; depends=[class ClassComparison ClassDiscovery e1071 neuralnet nnet oompaBase randomForest rpart TailRank]; }; + MomTrunc = derive2 { name="MomTrunc"; version="1.41"; sha256="0az499xzvnczqnbh4g3h5jyz8isq0zdw0x654haac6v6045f5xav"; depends=[matrixcalc mvtnorm]; }; Momocs = derive2 { name="Momocs"; version="1.2.2"; sha256="1a4y4zg9zd0pmhcjwvi5k1x36lyl1cw5i6bfm9qphd5bm438n70y"; depends=[ape dplyr geometry geomorph ggplot2 jpeg magrittr MASS plyr reshape2 sp]; }; Mondrian = derive2 { name="Mondrian"; version="1.0-0"; sha256="07r64q518diphai951pw4vfaw4sd6bqwhi6q5cp4pcl3aqjynkmj"; depends=[RColorBrewer]; }; MonetDB_R = derive2 { name="MonetDB.R"; version="1.0.1"; sha256="1r7vki0rrzwcrfg4f2lfx30g614vf2xi62qb1rs21a9j5741lxlx"; depends=[codetools DBI digest]; }; - MonetDBLite = derive2 { name="MonetDBLite"; version="0.5.0"; sha256="0p6d2ii1nvlmhfk94nh5ayxmjq90fcipisq3q4nv0kkf04pgvypl"; depends=[codetools DBI digest]; }; + MonetDBLite = derive2 { name="MonetDBLite"; version="0.5.1"; sha256="01gcwr5r47dkmr1y2q387xv1qr2fryq9574aijx1a39ywhvcm8pq"; depends=[codetools DBI digest]; }; MonoInc = derive2 { name="MonoInc"; version="1.1"; sha256="14rykw3bfj0vznz0rw4vsg1k4vanfv9cy867vspw966ncl4bw70h"; depends=[compare doParallel foreach iterators sitar]; }; MonoPhy = derive2 { name="MonoPhy"; version="1.2"; sha256="0997kg8hfwgsc9s155z0wrf7rrhn3vf6681j9psjl3hsspg08z2r"; depends=[ape phangorn phytools RColorBrewer taxize]; }; - MonoPoly = derive2 { name="MonoPoly"; version="0.3-8"; sha256="1dd2m4c726j94cxwsma33sc166c9656m7sl2b29bg6i0bmpvpmd2"; depends=[quadprog]; }; + MonoPoly = derive2 { name="MonoPoly"; version="0.3-9"; sha256="130hv05fwsskk1bvr7fk8bmafq26vimkfgssjdk3zaz0hm3pxrp4"; depends=[quadprog]; }; MonteCarlo = derive2 { name="MonteCarlo"; version="1.0.2"; sha256="1lb5cvly7v45kn24m8pyfw036b8j7lq4my0igaj859r74ky3knw9"; depends=[abind codetools rlecuyer snow snowfall]; }; Morpho = derive2 { name="Morpho"; version="2.5.1"; sha256="1cxxsg7j0fq9drxkl6xlaw7j2cajzx9khcs9f3mb9l2ixd42hqnp"; depends=[colorRamps doParallel foreach MASS Matrix Rcpp RcppArmadillo rgl Rvcg]; }; MorseGen = derive2 { name="MorseGen"; version="1.2"; sha256="1kq35n00ky70zmxb20g4mwx0hn8c5g1hw3csmd5n6892mbrri8s9"; depends=[]; }; - MortalityLaws = derive2 { name="MortalityLaws"; version="1.0.5"; sha256="1mb78kg8v3556zkk3pr9dd5xl5v63m9gcw9s8r17msx59w9w25cg"; depends=[minpack_lm pbapply RCurl]; }; + MortCast = derive2 { name="MortCast"; version="1.1-1"; sha256="077kk08pckm07rh7vxiw8whiyc4fbsj3qihih6mg09slaq8zr825"; depends=[wpp2017]; }; + MortHump = derive2 { name="MortHump"; version="0.2"; sha256="1yhrdcwqf27v22mrysh51m3jcrnf74x21x7db25nic8q8fdmchj2"; depends=[demography HMDHFDplus Matrix minpack_lm MortalitySmooth RColorBrewer svcm WeightedCluster]; }; + MortalityLaws = derive2 { name="MortalityLaws"; version="1.3.0"; sha256="1db4p7kl3kh3kdzqbbvyj3zxv6pz0jnc9fl7j2590ajwd5m9crg4"; depends=[minpack_lm pbapply RCurl]; }; MortalitySmooth = derive2 { name="MortalitySmooth"; version="2.3.4"; sha256="1clx8gb8jqvxcmfgv0b8jyvh39yrmcmwr472j9g3ymm95m4hr8fq"; depends=[lattice svcm]; }; MotilityLab = derive2 { name="MotilityLab"; version="0.2-5"; sha256="080j548sp1c4yqqd7p7zgr70j1xyrw3fgjj1f521sgh84x5h2hbc"; depends=[ellipse]; }; - MplusAutomation = derive2 { name="MplusAutomation"; version="0.7"; sha256="0xnipvfib16ycxglqnr5x0h19km0sw966w1xhaxw2ii6cm82ks0l"; depends=[boot coda digest gsubfn lattice pander plyr texreg xtable]; }; + MplusAutomation = derive2 { name="MplusAutomation"; version="0.7-1"; sha256="1f6gd227pkcs0sa9bwng0m617pjv3b0dm6rsij06a4n2gp50aysw"; depends=[boot coda digest gsubfn lattice pander plyr texreg xtable]; }; Mposterior = derive2 { name="Mposterior"; version="0.1.2"; sha256="16a7wvg41ld2bhbss480js5h12r41nl7jmc3y4jsbv1lr5py4ymy"; depends=[Rcpp RcppArmadillo]; }; MsdeParEst = derive2 { name="MsdeParEst"; version="1.7"; sha256="1zhi1jr30sl7jpsw37lc3akfzixlhm9k2hjkha1pjy5fmd5lddlx"; depends=[MASS moments mvtnorm sde]; }; MuFiCokriging = derive2 { name="MuFiCokriging"; version="1.2"; sha256="09p8wdmlsf21ibqyjigwdipcin3ij0naxcd035hqgfj76v20wiyv"; depends=[DiceKriging]; }; - MuMIn = derive2 { name="MuMIn"; version="1.40.0"; sha256="1vzziq8nczclsyf2a96rh32xk77k5bvgbk653b8133566m40ygw1"; depends=[Matrix]; }; + MuMIn = derive2 { name="MuMIn"; version="1.40.4"; sha256="1xw7b74qg0ivgk3l1krjn2wrl969c41hr0y2nk0z8fw94xcfggyr"; depends=[Matrix]; }; MuViCP = derive2 { name="MuViCP"; version="1.3.2"; sha256="1wkiwdz4bblxf1zr57khljqkga9ks9aj1lnidvmhib94q6b8fnf4"; depends=[gtools MASS sm]; }; MullerPlot = derive2 { name="MullerPlot"; version="0.1.2"; sha256="0am5brdmbh2mw74fbw9nha6h4qlhj8psg3142mql1ad99bd0zg4w"; depends=[RColorBrewer]; }; MultAlloc = derive2 { name="MultAlloc"; version="1.2"; sha256="0c3sqfaa08s8mk4yz77kh6q6v9ic5xp52g9prfw1k2kv4nw1k2qd"; depends=[Rglpk]; }; @@ -2136,14 +2176,16 @@ in with self; { MultiGHQuad = derive2 { name="MultiGHQuad"; version="1.2.0"; sha256="00prkn5awxrh365j1jz312har1x4p8v52a0sqfy00pqr44ncmqqq"; depends=[fastGHQuad Matrix mvtnorm]; }; MultiLCIRT = derive2 { name="MultiLCIRT"; version="2.11"; sha256="1qls0qp5fz377h50lvpzq3vkw49i3nvizli98gss50nqci8ssqm4"; depends=[limSolve MASS]; }; MultiMeta = derive2 { name="MultiMeta"; version="0.1"; sha256="0gj0wk39fqd21xjcah20jk16jlfrcjarspbjk5xv74c9k4p5gmak"; depends=[expm ggplot2 gtable mvtnorm reshape2]; }; - MultiOrd = derive2 { name="MultiOrd"; version="2.2"; sha256="0j7zl6a2yxiixxjrhwrp5z4wdi04fqc8qfq2hp0q02k28dzjg1g1"; depends=[corpcor Matrix mvtnorm psych]; }; + MultiOrd = derive2 { name="MultiOrd"; version="2.3"; sha256="157bsd5x3cw2yyv5y1hccpn7v42lqf99w09m6kdm0rxnhgjm8k1v"; depends=[corpcor Matrix mvtnorm psych]; }; MultiPhen = derive2 { name="MultiPhen"; version="2.0.2"; sha256="095avrxxi5q5nwi5kd6drz9az5fjq668my7z658mjdf3fl58csjm"; depends=[abind epitools gplots HardyWeinberg MASS meta RColorBrewer]; }; - MultiRNG = derive2 { name="MultiRNG"; version="1.0"; sha256="1h6yq39fjl7yg91z9kg9qhq36371xq85fzjip4fw8hnblwhns5n9"; depends=[]; }; + MultiRNG = derive2 { name="MultiRNG"; version="1.1"; sha256="1kljkxwl0ym0dzvhvj2jqkp8077wdgkcqfi3m4zrjcxdblzjmm00"; depends=[]; }; MultiRR = derive2 { name="MultiRR"; version="1.1"; sha256="1jrhx3nlqwsv3i6r8fs142llw88qad41rsh0sj1pv1gb928zpvl3"; depends=[lme4 MASS]; }; MultiSV = derive2 { name="MultiSV"; version="0.0-67"; sha256="0924lvkx12aqjxxz8bwqdi4h9xc2acf8aynllx0m45ip5r4gh1g2"; depends=[nlme reshape]; }; MultiSkew = derive2 { name="MultiSkew"; version="1.1.1"; sha256="1s0k3z1vgdz1cxad007p246ghwx282w06inhrjjscbwliz1vg5ib"; depends=[MaxSkew]; }; MultiVarSel = derive2 { name="MultiVarSel"; version="1.0"; sha256="0r1l7h2rm7vlvnrsq0khjdd5cb236g9xq1fb1vr15038kf0lmkij"; depends=[ggplot2 glmnet Matrix]; }; MultinomialCI = derive2 { name="MultinomialCI"; version="1.0"; sha256="0ryi14d102kvxawls04hcw50n79jkcn29ill77lkfvj6nlzj8i5q"; depends=[]; }; + MultipleBubbles = derive2 { name="MultipleBubbles"; version="0.1.0"; sha256="1g6yqp53dbd96jcjgmif39zb3a7f9zil10dhqi3vz3qv6r2vsnkj"; depends=[foreach MASS]; }; + MultiplierDEA = derive2 { name="MultiplierDEA"; version="0.1.17"; sha256="0s67w8ifd7g231aqq0qdia13kyb1cczhxrigsgrw48pqcfkv9208"; depends=[lpSolveAPI]; }; MultisiteMediation = derive2 { name="MultisiteMediation"; version="0.0.1"; sha256="0x13q2kckw7c7bl35vdxyhhr7ij62wf0qbkxa40fi6aq2gjh89m6"; depends=[lme4 Matrix statmod]; }; MultivariateRandomForest = derive2 { name="MultivariateRandomForest"; version="1.1.5"; sha256="0mww4x1hqraiyvmw2f9s6h180kplmj36hb7zfg7xlkmgdf4apk8d"; depends=[bootstrap Rcpp]; }; MvBinary = derive2 { name="MvBinary"; version="1.1"; sha256="1lrrxvphxv4gmlazx67q4bck9373nqylqgkwcjzwb52291a3zyiv"; depends=[mgcv]; }; @@ -2152,7 +2194,7 @@ in with self; { Myrrixjars = derive2 { name="Myrrixjars"; version="1.0-2"; sha256="1hhfg83z5kl6l250z3lippx3qc68k1wj1qlfzd6m66rgmk699gyl"; depends=[rJava]; }; NADA = derive2 { name="NADA"; version="1.6-1"; sha256="1jjlm6rljk4nv6b7l2w3xnj31j61wq30sp5pnna8wav6gyjqjfmb"; depends=[survival]; }; NAEPprimer = derive2 { name="NAEPprimer"; version="1.0.1"; sha256="19p1livdnayfcl88f8r9x1vg30x522q8lgx66pfgwpkxjzvrqa2l"; depends=[]; }; - NAM = derive2 { name="NAM"; version="1.5.4"; sha256="0hi677hn3jiplx58jnqnkbwrzj2ry6bq2yl9smf0flhsm1wcmpbp"; depends=[randomForest Rcpp]; }; + NAM = derive2 { name="NAM"; version="1.5.5"; sha256="1g3jvqvzs0wmy1phz25irfb5xh4274cdwcjm5dxmqnjdh30d31n3"; depends=[randomForest Rcpp]; }; NAPPA = derive2 { name="NAPPA"; version="2.0.1"; sha256="0nn4wgl8bs7sy7v56xfif7i9az6kdz9xw7m98z1gnvl2g7damvn3"; depends=[NanoStringNorm plyr]; }; NB = derive2 { name="NB"; version="0.9"; sha256="1gh42z7lp6g09fsfmikxqzyvqp2874cx3a6vr96w43jfwmgi2diq"; depends=[]; }; NB_MClust = derive2 { name="NB.MClust"; version="1.1.1"; sha256="0hzmrszxgx3pylf9pjjwk2ryjhwz7naxxkhcqpnfjv337vv5dg0i"; depends=[MASS]; }; @@ -2161,6 +2203,7 @@ in with self; { NCA = derive2 { name="NCA"; version="2.0"; sha256="08951mmmpziljclwzmbni1s5a62wr9s80iyfsr07gkdz4sx3cvqf"; depends=[gplots KernSmooth quantreg sfa]; }; NCSampling = derive2 { name="NCSampling"; version="1.0"; sha256="0bv93xffnzvbip86b3pg7apxzh3410mxff77q119m0z7f6vm3fam"; depends=[lattice randomForest yaImpute]; }; NCmisc = derive2 { name="NCmisc"; version="1.1.5"; sha256="1dq38ac97l8b6ys3yxqnndbrp8fa8zfw0lr4nq2421sn91769w22"; depends=[proftools]; }; + NCutYX = derive2 { name="NCutYX"; version="0.1.0"; sha256="0r2ghnvrbya3p1d8rb5bsnz5v852vvc6rq65yafn2xzr7886wrg2"; depends=[fields glmnet MASS mvtnorm Rcpp RcppEigen]; }; NEArender = derive2 { name="NEArender"; version="1.4"; sha256="1zdqil28j6jc6317dkpz5i1qj7b4i3lin4800n1kf14zg9nxjdyg"; depends=[MASS RColorBrewer ROCR]; }; NEff = derive2 { name="NEff"; version="1.1"; sha256="16ys1fi28kbzg3am9vz1c5pc9x0ac47pl6za04h63lspk99yplzk"; depends=[bit msm]; }; NEpiC = derive2 { name="NEpiC"; version="1.0.1"; sha256="11zf112xcsg3k93vks2fnsflw2v2d56a0bsjpd460d21k3gipfz8"; depends=[igraph PairedData]; }; @@ -2168,11 +2211,13 @@ in with self; { NHANES = derive2 { name="NHANES"; version="2.1.0"; sha256="0aphv3rakfcfrv2km1xyxpj1bxiazy6gwrvs7lyhxmq468fk4c9a"; depends=[]; }; NHEMOtree = derive2 { name="NHEMOtree"; version="1.0"; sha256="0ycprj2rz2fy6a7ps0bsr27iphmbfxi9pbvl8rcr6p8yagfb84mb"; depends=[emoa partykit rpart sets]; }; NHLData = derive2 { name="NHLData"; version="1.0.0"; sha256="0dfqalccbkmqrn3h1z6s78l818c8sqn7d6yc8mg872ygmszryci7"; depends=[]; }; - NHMSAR = derive2 { name="NHMSAR"; version="1.6"; sha256="02g3yhd5xmrk15ydj110yd80aff2vxk852b4kbhnl3flnf3j2mzk"; depends=[caTools glasso lars ncvreg ucminf]; }; + NHMSAR = derive2 { name="NHMSAR"; version="1.7"; sha256="14jc0zfl39yn7vkprcnv80mk1i4vp8w4wk7nz6f34cf473xbf49d"; depends=[caTools glasso lars ncvreg ucminf]; }; NHPoisson = derive2 { name="NHPoisson"; version="3.1"; sha256="1gr682kxgw227yqw9w0iw9lrijsz5iszhnfk0mdhi6m1w9s28kcn"; depends=[car]; }; NIPTeR = derive2 { name="NIPTeR"; version="1.0.2"; sha256="0ll6amqyw33a93xiccihidrnbaqlx1q7kqcd4wks7cvqawd8pgv1"; depends=[Rsamtools S4Vectors sets]; }; + NIRStat = derive2 { name="NIRStat"; version="1.0"; sha256="1hi8201zslp1f7m3jci8q03y3f1zlcck2x3i793l7lsyl7qbzd1z"; depends=[ggplot2 gridExtra mgcv]; }; NISTnls = derive2 { name="NISTnls"; version="0.9-13"; sha256="03a1c8a5dr5l5x4wbclnsh3vmx3dy7migfdzdx7d7p3s7hj3ibif"; depends=[]; }; NISTunits = derive2 { name="NISTunits"; version="1.0.1"; sha256="0km9l3k9p35sb1qrhrz4ijjsdihvsp6j7cz5kh46lgf7nn6xdk7a"; depends=[]; }; + NLMR = derive2 { name="NLMR"; version="0.2.1"; sha256="0vyha5sx0mz2kky8qwylamqc6k0gnmbkyanapy3dqav66l98ki8b"; depends=[checkmate dismo dplyr extrafont ggplot2 igraph magrittr purrr RandomFields raster rasterVis sp spatstat tibble tidyr viridis]; }; NLP = derive2 { name="NLP"; version="0.1-11"; sha256="15v50gxzmpqx49wzkwxfpb5xjpg9y829a0ifys372kf1cfj521aq"; depends=[]; }; NLPutils = derive2 { name="NLPutils"; version="0.0-4"; sha256="1dqbf8xmrzx81ybmp5qkd5a5rw3c19l2wxfnpddij4a1n074bwym"; depends=[NLP qdap SnowballC]; }; NLRoot = derive2 { name="NLRoot"; version="1.0"; sha256="1x8mcdgqqrhyykr12bv4hl4wbh1zw2qgpnd2yrm68kb92iy95rh4"; depends=[]; }; @@ -2182,7 +2227,7 @@ in with self; { NMOF = derive2 { name="NMOF"; version="1.2-2"; sha256="03286pp57m7imbgw334r34yg7c5zbaw3d1qxr0sbhmc2jxvv1arm"; depends=[]; }; NNLM = derive2 { name="NNLM"; version="0.4.1"; sha256="1wi2rbj56v49hsnhwdyyjwfk4hb84sagfq6mpjis4ccq65hxkvfv"; depends=[Rcpp RcppArmadillo RcppProgress]; }; NNMIS = derive2 { name="NNMIS"; version="1.0.0"; sha256="02k766klw2fssiii5f4291qvs144ab9i5b6pmqvhyr87zdb87nf9"; depends=[survival]; }; - NNS = derive2 { name="NNS"; version="0.3.8"; sha256="0xgycj4zyqfmhpx2jklj6xraq7bmkl87kh7jirwf440xyiqg2m8w"; depends=[data_table rgl stringr]; }; + NNS = derive2 { name="NNS"; version="0.3.8.3"; sha256="0qyb8y54hxy5ac6m0mqyqbfjc4r3m4qvb83nw2vp4mb49fiinwxx"; depends=[data_table rgl stringr]; }; NNTbiomarker = derive2 { name="NNTbiomarker"; version="0.29.11"; sha256="0sqlf7vzhpmq2g98c2qlrcqn3ba4ycfxbczgcjiqqhqsvgkpacc1"; depends=[magrittr mvbutils shiny stringr xtable]; }; NORMA = derive2 { name="NORMA"; version="0.1"; sha256="193q6dwn8v7k8xq0amjpvb3v6mn7c6agqa487gvjj78dy1qz720a"; depends=[rootSolve]; }; NORMT3 = derive2 { name="NORMT3"; version="1.0-3"; sha256="041s0qwmksy3c7j45n4hhqhq3rv2hncm2fi5srjpwf9fcj5wxypg"; depends=[]; }; @@ -2206,16 +2251,18 @@ in with self; { NScluster = derive2 { name="NScluster"; version="1.1.1"; sha256="1w63abh4q0wgv3x7inl2xyp9qgr9m223r2p7nfiqnxk9y259kh04"; depends=[]; }; NUCOMBog = derive2 { name="NUCOMBog"; version="1.0.4.1"; sha256="1grz2yxrklqglw9027c8k01jnb42p453fcd38arw4wd85y5hbam4"; depends=[snowfall]; }; NameNeedle = derive2 { name="NameNeedle"; version="1.2.4"; sha256="1f8hmabwafjmgx2z381a3m84zfrd0s9x51haa4c1phq41yfq2lm5"; depends=[]; }; - NanoStringNorm = derive2 { name="NanoStringNorm"; version="1.2.0"; sha256="0rlfjzw7nhb6x6gwp29xxg956avm2idkk15793kfylkw8p7vc0di"; depends=[gdata vsn XML]; }; + NanoStringNorm = derive2 { name="NanoStringNorm"; version="1.2.1"; sha256="05r1hvrxwi2mcq3pv6b699291qg120ijad96s5dah2f6cwx7gm7j"; depends=[gdata vsn XML]; }; + NatureSounds = derive2 { name="NatureSounds"; version="1.0.0"; sha256="1gx0h0z3zc373l0mxcigc25s41l3yiylzsrir5k4rrr2bvzgf8ir"; depends=[]; }; NbClust = derive2 { name="NbClust"; version="3.0"; sha256="1vwb48zy6ln1ddpqmfngii1i80n8qmqyxnzdp6gbaq96lakl3w3c"; depends=[]; }; NeatMap = derive2 { name="NeatMap"; version="0.3.6.2"; sha256="186y06zrh87q6vixl2da2d6apvcj1zkk79c95k081zj5awmryr9b"; depends=[ggplot2 rgl]; }; NegBinBetaBinreg = derive2 { name="NegBinBetaBinreg"; version="1.0"; sha256="0ryi9gdf4sis77c0qxm6r86mfkk1nq9djs297y64nr6ng3rv9p9d"; depends=[boot Matrix mvtnorm]; }; - NestedCategBayesImpute = derive2 { name="NestedCategBayesImpute"; version="1.0.0"; sha256="1az32kqr5bl0mn9d69v21m80w4w3xm3pydwmr2awlfmdq674410i"; depends=[coda dplyr Rcpp]; }; + NestedCategBayesImpute = derive2 { name="NestedCategBayesImpute"; version="1.1.0"; sha256="07gfp8k7v4krm4wsbynzs6zwprgg3g0c36jh8myqjxp2276ii8zn"; depends=[coda dplyr Rcpp]; }; NestedCohort = derive2 { name="NestedCohort"; version="1.1-3"; sha256="10hsc6zik8sz2mp6ig3xr6z3bq0c6rlvqkn11pxny17a4n02wapp"; depends=[MASS survival]; }; NetCluster = derive2 { name="NetCluster"; version="0.2"; sha256="0aby8kfniw07jap795cwk69z83p45q5rap73zp1qbmkm3qcb31g4"; depends=[sna]; }; NetComp = derive2 { name="NetComp"; version="1.6"; sha256="11rxpdihn575diqfvc7yvxhlr2c19fig4v4a5c6jhqyfdsd60fsv"; depends=[gdata]; }; NetData = derive2 { name="NetData"; version="0.3"; sha256="1jf05zwy0c6gmm7kvxlwvai61bz4wpsw7cl0h4i21ipzn1rqxmqj"; depends=[]; }; NetIndices = derive2 { name="NetIndices"; version="1.4.4"; sha256="0ydivbri8l8zkxi18ghj9h66915scyhca8i9mcyq4b06mjfigss8"; depends=[MASS]; }; + NetLogoR = derive2 { name="NetLogoR"; version="0.3.2"; sha256="1dqskma7iw178sy6gz0gr00zg84jgh95dv8w3hwz1wxsqpbpf1sb"; depends=[abind car CircStats data_table Hmisc matrixStats plyr quickPlot raster rgeos sp SpaDES_tools]; }; NetOrigin = derive2 { name="NetOrigin"; version="1.0-2"; sha256="1ldlx4nmc5k756fmbm9vxn9rwzxmad84zpi6318pjr52izms6q2k"; depends=[colorspace Hmisc igraph]; }; NetPreProc = derive2 { name="NetPreProc"; version="1.1"; sha256="0r51dqymf2nqm86py4zwdlf7qf120j0bg9r6a9c0gsyyijh4z40p"; depends=[graph]; }; NetRep = derive2 { name="NetRep"; version="1.0.4"; sha256="1a58wxmjhd2jm5n6bl5l2706fbvfvjksfaal65fy04ssw14nziw8"; depends=[abind BH foreach RColorBrewer Rcpp RcppArmadillo ref RhpcBLASctl statmod]; }; @@ -2224,41 +2271,45 @@ in with self; { NetWeaver = derive2 { name="NetWeaver"; version="0.0.2"; sha256="0wsmz7db8q2fycz6rfbbfs67ccj857y9zs4d80k1gnqazgj5whkn"; depends=[]; }; NetworkChange = derive2 { name="NetworkChange"; version="0.3"; sha256="1brpa6fhmrgafmk1iw19g0pppwxi0ld0nyhx9c0fgnkn9m82isjk"; depends=[abind ggplot2 ggvis LaplacesDemon MASS MCMCpack mvtnorm RColorBrewer Rmpfr]; }; NetworkComparisonTest = derive2 { name="NetworkComparisonTest"; version="2.0.1"; sha256="09fqlnpdibf9jr5mw2pzmwi66f6cjz8rmm8jay0cv2bami7jhy2a"; depends=[IsingFit IsingSampler qgraph reshape2]; }; - NetworkInference = derive2 { name="NetworkInference"; version="1.1.1"; sha256="053p7cpzmr2jwrgmdlwvipv5vfhvy52xw0xc51lnd4yiwmv4y5l0"; depends=[assertthat checkmate ggplot2 ggrepel Rcpp]; }; + NetworkDistance = derive2 { name="NetworkDistance"; version="0.1.0"; sha256="0k11crn1wiisw4qrc2yidrhdvscx59skqy4ckxdiykpb1jh5a7s4"; depends=[doParallel foreach igraph Matrix network Rcpp RcppArmadillo Rdpack RSpectra]; }; + NetworkInference = derive2 { name="NetworkInference"; version="1.1.2"; sha256="0lydfkpgsi842fbapnggpngarvqc8arhy4qn13x47myk1mmkkisj"; depends=[assertthat checkmate ggplot2 ggrepel Rcpp RcppProgress]; }; NetworkRiskMeasures = derive2 { name="NetworkRiskMeasures"; version="0.1.2"; sha256="0c10nahybjd1n0yr78ynbsdnkfa0p7kz6dx3rbwxwsp3x4mrcd6y"; depends=[dplyr expm ggplot2 Matrix]; }; - NetworkToolbox = derive2 { name="NetworkToolbox"; version="0.0.1.0"; sha256="01bha1kz1v4i2rv8kkmy57vsr0ni9764zzvf55sqnmnw2z405dic"; depends=[devtools Matrix psych qdap qgraph]; }; - NeuralNetTools = derive2 { name="NeuralNetTools"; version="1.5.0"; sha256="04r0716vlv54cjybxspq61ahb12f2i8krhils5layr436k7slm07"; depends=[ggplot2 nnet reshape2 scales tidyr]; }; + NetworkToolbox = derive2 { name="NetworkToolbox"; version="1.0.0"; sha256="1z0l8fdxvyxgajq0j6sx6mvr15sxd45kavy8ywk3hnlwcz1xy7m8"; depends=[corrplot devtools fdrtool graph hypergeo igraph MASS Matrix psych pwr qgraph R_matlab RBGL RColorBrewer]; }; + NeuralNetTools = derive2 { name="NeuralNetTools"; version="1.5.1"; sha256="1dsjv0vm45skw74x1fz3gd7g6p52ayfwz85bh92j29mfxbnacbnn"; depends=[ggplot2 nnet reshape2 scales tidyr]; }; Newdistns = derive2 { name="Newdistns"; version="2.1"; sha256="1b5njkzj8b0wrvvfv904di0933k9d320gadmfm5zl6pzdp34bh1i"; depends=[AdequacyModel]; }; NightDay = derive2 { name="NightDay"; version="1.0.1"; sha256="0vkpr2jwhgghiiiaiglaj1b9pz25fcsl628c9nsp9zyl67982wz1"; depends=[maps]; }; Nippon = derive2 { name="Nippon"; version="0.6.5"; sha256="187jzqsabg0vfvipbaig6nsdwclk5p3hgkvg0yid2ip8qc5qcmdw"; depends=[maptools sf sp stringr]; }; + NipponMap = derive2 { name="NipponMap"; version="0.1"; sha256="09cvzw32f0kwlwvrv7r6cx2x2jkc2wv843aip8r3iziixmcy7vxq"; depends=[sf tibble]; }; NlcOptim = derive2 { name="NlcOptim"; version="0.5"; sha256="0chrf9ac3x1a0b86lf6wjzdsjcv5n08rav88b7xf4c31lflf1rd1"; depends=[MASS quadprog]; }; NlsyLinks = derive2 { name="NlsyLinks"; version="2.0.6"; sha256="1kdqifwjkkk4x1ixg3ca6lbqx79ab907nnzwxca5iw721mbk5njg"; depends=[lavaan]; }; NoiseFiltersR = derive2 { name="NoiseFiltersR"; version="0.1.0"; sha256="0y90si8f5hsi273g10hw700r72la30hwqlwg59gaq76wqlkm8j0p"; depends=[caret e1071 kknn MASS nnet randomForest rJava rpart RWeka]; }; NominalLogisticBiplot = derive2 { name="NominalLogisticBiplot"; version="0.2"; sha256="0m9442d9i78x57gdwyl3ckwp1m6j27cam774zkb358dw5nmwxbmz"; depends=[gmodels MASS mirt]; }; NonCompart = derive2 { name="NonCompart"; version="0.3.3"; sha256="0f66p122rdibn8k79wjhvslgankhxk4dq9sfvq0gcabmi1skfqgq"; depends=[]; }; NonpModelCheck = derive2 { name="NonpModelCheck"; version="3.0"; sha256="13qk2wbgpdf763q5xg29p2hxwqpml23pcgxrzmx12vnapnqfh71k"; depends=[dr]; }; + Nonpareil = derive2 { name="Nonpareil"; version="3.3"; sha256="0bli88salj7mxmnh3b8wims1jlfzlq2lxd4kn2bp2vi58ij9v9pm"; depends=[]; }; NormPsy = derive2 { name="NormPsy"; version="1.0.5"; sha256="0zhv6p9ffm2g02nr302j3qc6mrk5n4xxznircgbp4jx7hcj7cf1m"; depends=[lcmm]; }; NormalGamma = derive2 { name="NormalGamma"; version="1.1"; sha256="0r3hhfscif0sx9v8f450yf119gpvf3ilpb8n3ziy4v4qf2jlcfnk"; depends=[histogram optimx]; }; NormalLaplace = derive2 { name="NormalLaplace"; version="0.2-0"; sha256="11z568zhb7jw9ghp6wlyf26ijm25crc5pqhzw71qgvva42nsmmwn"; depends=[DistributionUtils GeneralizedHyperbolic]; }; NormalizeMets = derive2 { name="NormalizeMets"; version="0.22"; sha256="1vhmdr3rbqxhp28zv7r8hzvmrrxq58rpj5n1az9pqmh6a9si678s"; depends=[AUC Biobase crmn DiffCorr e1071 GGally ggplot2 gplots htmlwidgets impute limma metabolomics MetNorm plotly RGtk2 statTarget]; }; NostalgiR = derive2 { name="NostalgiR"; version="1.0.2"; sha256="0rpvwi815sdhaxqpji1y6g0vy8mkn5k6wci0a4jf54pkywwkwrwp"; depends=[txtplot]; }; Nozzle_R1 = derive2 { name="Nozzle.R1"; version="1.1-1"; sha256="05sjip4sz12mwd3jcbvk342p83kdmrd4l2jrh17p18w4l7w4nn0z"; depends=[]; }; + Numero = derive2 { name="Numero"; version="1.0.3"; sha256="1jj269b5cw7w4bgp6qvh0b3kpj32fjpsb2nbhyhjlkf7m03gnwwv"; depends=[Rcpp]; }; OAIHarvester = derive2 { name="OAIHarvester"; version="0.3-0"; sha256="1c57jxb9n397wdkrirbfh70sxllrg9zsy0np698z7kcx83rz5lqr"; depends=[curl xml2]; }; OBMbpkg = derive2 { name="OBMbpkg"; version="1.0.0"; sha256="01wch8wwij3fd0jambk0hpkhlnp4ryrq8qnnr2w1iad9zssjyii5"; depends=[]; }; OBRE = derive2 { name="OBRE"; version="0.1-0"; sha256="1sxfb8mn0ky8x177l3v6wwcr96h5hfwd718h1akwrpir7acldchl"; depends=[pracma]; }; - OBsMD = derive2 { name="OBsMD"; version="0.2-0.00"; sha256="16km0v6678lbgh9n2d9nvmpq6k7d2gicc68wnfy4kvn9vmpr79cz"; depends=[Rcpp]; }; + OBsMD = derive2 { name="OBsMD"; version="2.1"; sha256="1w5d23m3nzswin803icw9vsafqcis2lkzr5bnhaa3bl5dq1xn5q5"; depends=[]; }; OCA = derive2 { name="OCA"; version="0.1"; sha256="0kaf46gic8gp8f98y68kqvgm1baicwgvarfiwry1j0bd2rjad64d"; depends=[]; }; ODB = derive2 { name="ODB"; version="1.1.1"; sha256="1hha4rkbc2zh3karkqa0vn4v0nmcd7sljcymy1nh28bx1gx2ffgs"; depends=[DBI RJDBC]; }; - ODMconverter = derive2 { name="ODMconverter"; version="2.3"; sha256="07j9p2hfx3almd5n3j0clc1alj5wzrnzljd9w13bbd6nrvil1krm"; depends=[xlsx XML]; }; OData = derive2 { name="OData"; version="0.6"; sha256="10r4kfhdabramjmkgc4fl0bljaiqbvc7rq4byas7q8cmji2czw6f"; depends=[RJSONIO XML]; }; OECD = derive2 { name="OECD"; version="0.2.2"; sha256="07flhhca7734fffcqvxjl1hlhbbhn6lch868rlpps0r99jxy8m5q"; depends=[httr rsdmx xml2]; }; + OGI = derive2 { name="OGI"; version="1.0.0"; sha256="0qw55jamkvdf3vfa5c0ygbymbs4d9q15dihiqz691hdfnyjvc2mk"; depends=[lpSolve]; }; OHPL = derive2 { name="OHPL"; version="1.3"; sha256="0hm229nyv96s3sjljn5rwh89g1n6wsf24qm3ll5ccb0q2pcwnd7r"; depends=[glmnet mvtnorm pls]; }; OIdata = derive2 { name="OIdata"; version="1.0"; sha256="078khxrszwnrww2h0ag153bf59fnyhirxy4m56ssgr2gmfahaymf"; depends=[maps RCurl]; }; OIsurv = derive2 { name="OIsurv"; version="0.2"; sha256="148mpjj5navc1vrl72y87krn4lf3awnd32z3g4qqaia404w5w7p7"; depends=[KMsurv survival]; }; OLScurve = derive2 { name="OLScurve"; version="0.2.0"; sha256="1zqapfwgwy9rxnbhmlgplkphw1bdia4cyi9q6iwcppw3rjw75f1n"; depends=[lattice]; }; ONETr = derive2 { name="ONETr"; version="1.0.3"; sha256="14l56qcmyyk2ivcfkfv7j2k4i1mfrngpi9zcc88w6xfhz5qlb548"; depends=[plyr RCurl XML]; }; OOBCurve = derive2 { name="OOBCurve"; version="0.2"; sha256="1dr2mp2wi2dir1h5w3rw17154byfy3gx02x2kz1r67l9dfgrr505"; depends=[mlr randomForest ranger]; }; - OOR = derive2 { name="OOR"; version="0.1.1"; sha256="09c7c2inpnag3kckrg9lfzxd3giqkj9xm91ibjkgpfv68nf733qc"; depends=[]; }; + OOR = derive2 { name="OOR"; version="0.1.2"; sha256="1zw7g0365znyn828qqsn83l2a837wwj9cx7dzcbns28vhqmsn6hm"; depends=[]; }; OOmisc = derive2 { name="OOmisc"; version="1.2"; sha256="09vaxn5czsgn6wpr27lka40kzd76jzqgqxavf26ms3m9kkdf83g4"; depends=[]; }; OPDOE = derive2 { name="OPDOE"; version="1.0-9"; sha256="0pf8rv5wydc8pl4x57g7bk2swjabaxdgijgsigjy5wihfcb48654"; depends=[crossdes gmp mvtnorm nlme orthopolynom polynom]; }; OPI = derive2 { name="OPI"; version="2.7"; sha256="0mmk8alpwm4vmq2yr4qkri2zkh4lxfvrp70j0zljinxcynaraqzn"; depends=[]; }; @@ -2269,6 +2320,7 @@ in with self; { ORMDR = derive2 { name="ORMDR"; version="1.3-2"; sha256="0y7b2aja3zvsd6lm7jal9pabcfxv16r2wh0kyzjkdfanvvgk3wmm"; depends=[]; }; OSCV = derive2 { name="OSCV"; version="1.0"; sha256="17wrfak6b6m2l3iqbhdwcfh0rlqb14rkvrbari7v46gya9v7hq20"; depends=[mc2d]; }; OSMscale = derive2 { name="OSMscale"; version="0.5.1"; sha256="0rjhyhh1iafgd9h1pbd2clyg2sh0gg7y1aqmiislqyn6h6jrvgqn"; depends=[berryFunctions OpenStreetMap sp]; }; + OSTSC = derive2 { name="OSTSC"; version="0.0.1"; sha256="0p92w25xvajsn44rd5hg1m7l9l4m0rpmw175nnqr438432hqh7cc"; depends=[doParallel doSNOW fields foreach MASS]; }; OTE = derive2 { name="OTE"; version="1.0"; sha256="18w483syhs523yfib9sibzmj16bypqxk4sc4771kfr1958h3igai"; depends=[randomForest]; }; OTRselect = derive2 { name="OTRselect"; version="1.0"; sha256="1bh14228yz552ngywjf1qyh1isqj4cgiy7n7d4zg8dpqwxr04ykp"; depends=[lars survival]; }; OTUtable = derive2 { name="OTUtable"; version="1.1.1"; sha256="0mjjfndc67gzkqskcq4sxpr8fwx3lm3wjgapgg64rbj5x4i1w4rp"; depends=[]; }; @@ -2281,17 +2333,18 @@ in with self; { OjaNP = derive2 { name="OjaNP"; version="0.9-9"; sha256="12a7zfrk3rdvfby5qa511w3nk5jpnsd5gg2z46b5s97rxb3qq7za"; depends=[ICS ICSNP Rcpp]; }; OligoSpecificitySystem = derive2 { name="OligoSpecificitySystem"; version="1.3"; sha256="17mspf1ph2ybv046zckykfdcbrsiz40hrs6ib5mpwkfnrvsp1w7l"; depends=[tkrplot]; }; OmicKriging = derive2 { name="OmicKriging"; version="1.4.0"; sha256="08frr38yf5d0l3zwkbq9465xrbyzsn8sx9icqc3yvfnxrkhrpzig"; depends=[doParallel foreach irlba ROCR]; }; - OmicsPLS = derive2 { name="OmicsPLS"; version="1.0.3"; sha256="0i8vc4lg642pgy934hv1nln91g5s15la0328bbs530fx6c2132dz"; depends=[ggplot2]; }; + OmicsPLS = derive2 { name="OmicsPLS"; version="1.1.0"; sha256="16q226y8wshjdry538w6zk116rip97hr5bfjyz8g960gy40pjn6j"; depends=[ggplot2]; }; OnAge = derive2 { name="OnAge"; version="1.0.1"; sha256="1zby5sf92c185b5m19jv4ndgbv6mz107nc47zn1d6bijrypzpc20"; depends=[]; }; Oncotree = derive2 { name="Oncotree"; version="0.3.3"; sha256="147rc9ci66lxbb91ys2ig40sgmldi15p604yysrd4ccbxpbk2zwf"; depends=[boot]; }; OneArmPhaseTwoStudy = derive2 { name="OneArmPhaseTwoStudy"; version="1.0.3"; sha256="0q8g33s1jq0ipvwq83xhrly8idsh68licgyivxc628zbm1id5p38"; depends=[Rcpp]; }; OneR = derive2 { name="OneR"; version="2.2"; sha256="1k7rzhcwq5b2yi4zfsc1r0yb6w65gxj9835d2a1dclallja3zav2"; depends=[]; }; OneTwoSamples = derive2 { name="OneTwoSamples"; version="1.0-3"; sha256="0019rc2f4jmbm6sinkvalvjqwi822x78aiin88kg8qbbb5ml8l89"; depends=[]; }; + OpVaR = derive2 { name="OpVaR"; version="1.0"; sha256="03bl7z78zgjmpc0mpmcq98zfscj3jja1fiwzx58rw5yk0dhqrhm8"; depends=[actuar evmix goftest MASS ReIns tea truncnorm vcd VineCopula]; }; OpasnetUtils = derive2 { name="OpasnetUtils"; version="1.3"; sha256="0mmn4dpk1wl8slg55xzhpk7jdwhkrka53rwmrsr73sikkh3mcyfn"; depends=[digest ggplot2 httpRequest igraph plyr RCurl reshape2 rgdal rjson sp triangle xtable]; }; OpenCL = derive2 { name="OpenCL"; version="0.1-3"; sha256="0f7vis0jcp0nh808xbzc73vj7kdcjb0qqzzsh3gvgamzbjfslch8"; depends=[]; }; - OpenImageR = derive2 { name="OpenImageR"; version="1.0.7"; sha256="1fj5jss2i1qvphy7zd8vny5ifnn7jpi603zzbyw50m2pf10z3pd8"; depends=[jpeg png Rcpp RcppArmadillo shiny tiff]; }; + OpenImageR = derive2 { name="OpenImageR"; version="1.0.8"; sha256="1j7p1wrzznrisbzw8j1qsxyyv3zr5hk6q9yxw97y6lrfh3c26ig1"; depends=[jpeg png Rcpp RcppArmadillo shiny tiff]; }; OpenML = derive2 { name="OpenML"; version="1.7"; sha256="052pm43pnjil3v8wx429bz13xc90hyqx2hz33zrq0sjdsx9zpi6k"; depends=[backports BBmisc checkmate curl data_table digest httr jsonlite memoise mlr ParamHelpers stringi XML]; }; - OpenMPController = derive2 { name="OpenMPController"; version="0.2-4"; sha256="1m2jkkh30836zs1445yfy30r3gp1qay0zqj02px3ijgzpzb928i5"; depends=[]; }; + OpenMPController = derive2 { name="OpenMPController"; version="0.2-5"; sha256="00hs8v47pr2d726z8izkfrgmayw147hdm16rr9rw1zs3ad216zjj"; depends=[]; }; OpenMx = derive2 { name="OpenMx"; version="2.8.3"; sha256="0kz1x3x43jf326x7l8lb7rlnng4r5cp11vrs1pnnxkmbhqzbbwy8"; depends=[BH digest MASS Matrix Rcpp RcppEigen rpf StanHeaders]; }; OpenRepGrid = derive2 { name="OpenRepGrid"; version="0.1.10"; sha256="0ikw8l9hffcaa094y6pnvyc3ly5jb02djaakz668ba15a0yw0wmb"; depends=[abind colorspace GPArotation plyr psych pvclust rgl stringr XML]; }; OpenStreetMap = derive2 { name="OpenStreetMap"; version="0.3.3"; sha256="099vdyq0vw9xl5v7zggdb8yd4zl7x8imvvbj5j2f5hrspgg131pz"; depends=[ggplot2 raster rgdal rJava sp]; }; @@ -2299,6 +2352,7 @@ in with self; { OptGS = derive2 { name="OptGS"; version="1.1.1"; sha256="1acwwjng5ri5vganv7b5pagp7524ifr0q8h1pbfb5g6z3x6w08kh"; depends=[]; }; OptHedging = derive2 { name="OptHedging"; version="1.0"; sha256="0g7qaf5abvbcqv2h1dciwn3gwpz084ryqjjk0yabdm4ym0y38ddm"; depends=[]; }; OptInterim = derive2 { name="OptInterim"; version="3.0.1"; sha256="1ks24yv5jjhlvscwjppad27iass59da1mls99hlif0li9mvkbvyk"; depends=[clinfun mvtnorm]; }; + OptSig = derive2 { name="OptSig"; version="1.0"; sha256="1jmnxwci4rzlwgnq4zxhkii9j7ch1bymx44hk3qv7ws24k7g87nn"; depends=[pwr]; }; OptimaRegion = derive2 { name="OptimaRegion"; version="0.2"; sha256="0xhl7jp2429007jzx305ggfwyx0vh2vxw7l2a7f3c0prklhyqpqc"; depends=[boot DepthProc fields nloptr rsm spam]; }; OptimalCutpoints = derive2 { name="OptimalCutpoints"; version="1.1-3"; sha256="1vrbx62080r9sgk9ipjvdrqvikp4gwidp5gi5j92hspk7cp10amg"; depends=[]; }; OptimalDesign = derive2 { name="OptimalDesign"; version="0.2"; sha256="1gpcasdbcgqqr1l6f63q4jqva28rpz0cbgs1f4l3bizldd9kf4kh"; depends=[]; }; @@ -2307,7 +2361,7 @@ in with self; { OrdFacReg = derive2 { name="OrdFacReg"; version="1.0.6"; sha256="16mavsmp6d8rfmimmp5ynwyzir0gycpg8rhd8cwanlrndyclqlpv"; depends=[eha MASS survival]; }; OrdLogReg = derive2 { name="OrdLogReg"; version="1.1"; sha256="18s75pmz1g3yac2rfl41kj8sfflq298qkijnvqlybgxpq98ickxx"; depends=[LogicReg]; }; OrdMonReg = derive2 { name="OrdMonReg"; version="1.0.3"; sha256="1xca8pvvq79j484l2rmn4nva8ncx8z51g5diljikck231y8qjqaz"; depends=[]; }; - OrdNor = derive2 { name="OrdNor"; version="2.0"; sha256="1zr8zzigrbf6r0zz4f0za6my6d67wxqzvmabl36pjxc3sq7jh83j"; depends=[corpcor GenOrd Matrix mvtnorm]; }; + OrdNor = derive2 { name="OrdNor"; version="2.1"; sha256="1s3lhkscr4w36qjq02qlb3pw37naq0k99khr9648qzshhzsfxibl"; depends=[corpcor GenOrd Matrix mvtnorm]; }; OrdinalLogisticBiplot = derive2 { name="OrdinalLogisticBiplot"; version="0.4"; sha256="1axn03yrw30r2j9ss5ig9sq857y37vhrr4a7px68jc2az8mng41j"; depends=[MASS mirt NominalLogisticBiplot]; }; OrgMassSpecR = derive2 { name="OrgMassSpecR"; version="0.5-3"; sha256="1dx9d8rb1dfqyhyc26zhfnxiv3rz2ikvs2mwqnsrq3lsjs9dvyc8"; depends=[]; }; OriGen = derive2 { name="OriGen"; version="1.4.3"; sha256="0a7mql87dqxrfx7phgy32hbanfwnjx8x52mj83xf2mgmqhrcikr6"; depends=[ggplot2 maps]; }; @@ -2315,13 +2369,13 @@ in with self; { OutbreakTools = derive2 { name="OutbreakTools"; version="0.1-16"; sha256="1ffqfr1pwlf53ahbh01ygv3d2d8fl47k9kk61l2h0g4h601swadi"; depends=[ape ggmap ggplot2 knitr network networkDynamic plyr RColorBrewer RCurl reshape2 rjson scales sna]; }; OutlierDC = derive2 { name="OutlierDC"; version="0.3-0"; sha256="1vm3zx4qmj9l0ddfqbksm1qyqzzqrxf93gh4kj52h68zlsfxwv41"; depends=[Formula quantreg survival]; }; OutlierDM = derive2 { name="OutlierDM"; version="1.1.1"; sha256="0n8iq464ryc3v4wms7cdka39870w5pg29z9v8gmdsp4d9cfsx9v4"; depends=[MatrixModels outliers pcaPP quantreg]; }; - OutliersO3 = derive2 { name="OutliersO3"; version="0.2.1"; sha256="09kq3jhsqxwqsnn8av12jd0qxw0ai1h0f46mib1z0bwwbxg6bf9h"; depends=[cellWise dplyr FastPCS forcats GGally ggplot2 HDoutliers rlist robustbase robustX tidyr]; }; + OutliersO3 = derive2 { name="OutliersO3"; version="0.5.4"; sha256="0mbhbgq9qh74gb8x1hapx4pjik3p7jrls3bg7rg1zzddakxibis2"; depends=[cellWise dplyr FastPCS forcats GGally ggplot2 HDoutliers memisc rlist robustbase robustX tidyr]; }; OutrankingTools = derive2 { name="OutrankingTools"; version="1.0"; sha256="0z7pslkkinn7flc4xwjg0bsfswf8ad4jv9rmglaj3fmjcx9b6wgj"; depends=[igraph]; }; OxyBS = derive2 { name="OxyBS"; version="1.5"; sha256="11l3gm0jvw993jb13f6kpv77m6z0d1jswscma2v28qzkw053r3dc"; depends=[]; }; P2C2M = derive2 { name="P2C2M"; version="0.7.6"; sha256="07ycl22v03b2xdaw4v0l6layqhab431ma38qywzm96hkl3ywvl49"; depends=[ape ggplot2 rPython stringr]; }; PAC = derive2 { name="PAC"; version="1.0.9"; sha256="1757wpy92hhk1gpzm719kkhh31qkn0a2cbagyn3pnx5vklywfzz1"; depends=[dplyr ggplot2 ggrepel igraph infotheo parmigene Rcpp Rtsne]; }; PACBO = derive2 { name="PACBO"; version="0.1.0"; sha256="1v3j5bgvf0wh8s4d2yyz0fkc3acdwjlicwnbh1r241b1742x79cb"; depends=[mnormt]; }; - PAFit = derive2 { name="PAFit"; version="1.0.0.1"; sha256="12cq692wfvakyhxqjjzcvrwy7yclki7pqn6k507hd44ka3lva3nl"; depends=[igraph magicaxis MASS network networkDynamic plyr RColorBrewer Rcpp VGAM]; }; + PAFit = derive2 { name="PAFit"; version="1.0.0.3"; sha256="0s9zxr9368cf6skskqb2q67jkynzm4s3qp07i0m1zrmn9142hw9z"; depends=[igraph magicaxis mapproj MASS network networkDynamic plyr RColorBrewer Rcpp VGAM]; }; PAGI = derive2 { name="PAGI"; version="1.0"; sha256="01j1dz5ihqslpwp9yidmhw86l112l7rfkswmf03vss872mpvyp3f"; depends=[igraph]; }; PAGWAS = derive2 { name="PAGWAS"; version="2.0"; sha256="0bz47ivd32kx1amgqllqbxyyvj773q7wasgk924hmibabiixa8nx"; depends=[foreach lars mnormt]; }; PANDA = derive2 { name="PANDA"; version="0.9.9"; sha256="1sf3c49v4mb3mz2imqlqdbh1iab7bc2pxpi8bmgj2jld133555ip"; depends=[cluster GO_db]; }; @@ -2334,24 +2388,26 @@ in with self; { PATHChange = derive2 { name="PATHChange"; version="1.0"; sha256="1pmxhaych01cywx9bb5z0p5lbxcma7x6nlprivpx3gnpg7m9srpg"; depends=[rlist stringr VennDiagram]; }; PAWL = derive2 { name="PAWL"; version="0.5"; sha256="1sx4g4qycba2j1fm0bvhz3hk6ghhdc37rz5zi1njqxrpmbnkqg04"; depends=[foreach ggplot2 mvtnorm reshape]; }; PAactivPAL = derive2 { name="PAactivPAL"; version="2.0"; sha256="1mjfxq0a9fql8bg5c6l5w1knjqq29cb4l10ppxnym9gnsjrk0kw1"; depends=[]; }; + PAmeasures = derive2 { name="PAmeasures"; version="0.1.0"; sha256="0c2pkms06lijly9clxp6zkasqy4zjicdwnvbqwvhp45yavwmkkkj"; depends=[survival]; }; PBD = derive2 { name="PBD"; version="1.4"; sha256="1n8gq8ms6gszr469hblipbgalc5m7gfiknpsbqywxml62sr4wbsb"; depends=[ade4 ape DDD deSolve phytools]; }; - PBIBD = derive2 { name="PBIBD"; version="1.2"; sha256="1dbrd6qwczwk41zmh9ck9cgzqpry9kycygyk0ls8kc92p45cz3dh"; depends=[]; }; + PBIBD = derive2 { name="PBIBD"; version="1.3"; sha256="0zh73bsiwmsqw1vhs2dazndsf0894kfv3vfv88wr4fnh7njysz6r"; depends=[]; }; PBImisc = derive2 { name="PBImisc"; version="1.0"; sha256="18gjp66q6l0w6vsgm6d5sjgpa906z1gyyp6yf58lq5vyg1bnfmcl"; depends=[lme4 Matrix]; }; - PBNPA = derive2 { name="PBNPA"; version="0.0.1"; sha256="1a43kk7di5bqifa68lhrxx3p9vvfn0rr5nifx60c2y7j7cp63fk8"; depends=[metaRNASeq]; }; + PBNPA = derive2 { name="PBNPA"; version="0.0.2"; sha256="1qyjksm2z1p279aimb3zaaaj4328m5p0cbkqm3qzl87yp5g45vyq"; depends=[metaRNASeq]; }; PBSadmb = derive2 { name="PBSadmb"; version="0.68.104"; sha256="01akimdsp0bkvz3a5d75yyy3ph0mff85n8qsnr59fla5b5cm4qlj"; depends=[PBSmodelling]; }; PBSddesolve = derive2 { name="PBSddesolve"; version="1.12.2"; sha256="12pl95mcak88524s8zvk9dzib2g40fwaz6iz7igx9wg6vib9d1sj"; depends=[]; }; PBSmapping = derive2 { name="PBSmapping"; version="2.70.4"; sha256="09kzydgghgmhnna24gpq1hjgw7w9i1lm6nwkj358jsik6fjph73r"; depends=[]; }; - PBSmodelling = derive2 { name="PBSmodelling"; version="2.67.266"; sha256="0ych9k20x0m71gkdrpwv5jnx6pfsk45wwsaaamy32cmnhd3y14sq"; depends=[XML]; }; + PBSmodelling = derive2 { name="PBSmodelling"; version="2.68.6"; sha256="1d5shqvzfyi0fy03wcib2db497nsdw211ahfcvl1kaady1immz2w"; depends=[XML]; }; PCA4TS = derive2 { name="PCA4TS"; version="0.1"; sha256="1qi9nlaf5181afrdvddh10a9vxyhry102n3dhai86im8yz4if9y6"; depends=[tseries]; }; PCA4you = derive2 { name="PCA4you"; version="1.2.4"; sha256="117wb0h4jqjymm1p90m6vgj713iavrmj035c2gz5nynligvfnm83"; depends=[mixOmics]; }; PCADSC = derive2 { name="PCADSC"; version="0.8.0"; sha256="0pwkmmnsw3c6ch2k5wdc8ig71994pdp79v3a5aa9n9aq55a8c2ir"; depends=[ggplot2 Matrix pander reshape2]; }; PCAmixdata = derive2 { name="PCAmixdata"; version="3.1"; sha256="0flrsnbchwk06dmkg3vqykp9n4pqs265szn1r10navp8ki3rrmvh"; depends=[]; }; PCDSpline = derive2 { name="PCDSpline"; version="1.0"; sha256="15kmvcwvwlsr1107n7mfajvf9b1kcslnhsdx0drjjhsvq193qrqa"; depends=[matrixcalc nleqslv]; }; + PCDimension = derive2 { name="PCDimension"; version="1.1.8"; sha256="1359cmswynv9xqbfb60kh32ifm9wgm20iplkdfzf5v2c4vxd0rmf"; depends=[changepoint ClassDiscovery cpm kernlab oompaBase]; }; PCFAM = derive2 { name="PCFAM"; version="1.0"; sha256="196jzv0f6j60zkyagm9n98339ipn8mrhmhl3q4g053z8f6mm9zmv"; depends=[]; }; PCGSE = derive2 { name="PCGSE"; version="0.4"; sha256="0ky1nzhz6v9n34kas9nw2scc6ip7av19g09zcsxaa9436nhip4f6"; depends=[MASS RMTstat safe]; }; PCICt = derive2 { name="PCICt"; version="0.5-4"; sha256="1g17hxs00dlnb6p0av6l7j99qy00555f80nk1i1i1x87fszp3axa"; depends=[]; }; PCIT = derive2 { name="PCIT"; version="1.5-3"; sha256="0gi28i2qd09pkaja4w7abcl7sz43jnk98897vc2905fnk9nks65j"; depends=[]; }; - PCMRS = derive2 { name="PCMRS"; version="0.0-2"; sha256="0xybfqjla1wdlrfskjwff0brl2hp5d2fs646k3gzjm0lzbi5z9mq"; depends=[cubature ltm mvtnorm Rcpp RcppArmadillo statmod]; }; + PCMRS = derive2 { name="PCMRS"; version="0.1-1"; sha256="10n4am4qm23aaghf8awv2llcq7392s62yr6mf5h8nf18hfz29wrn"; depends=[cubature ltm mvtnorm Rcpp RcppArmadillo statmod]; }; PCPS = derive2 { name="PCPS"; version="1.0.3"; sha256="1ys3xp1nripy5zkq25byak9k6yf5rdbfnww8j13yc469428ip8q0"; depends=[ape phylobase picante SYNCSA vegan]; }; PCRedux = derive2 { name="PCRedux"; version="0.2.5-1"; sha256="1p5qmz09ajbm1iypyz5rn9bwzbbx57gc6a0xzrm900dw2r2cf7ph"; depends=[bcp changepoint chipPCR ecp fda_usc FFTrees magrittr MBmca pbapply plotly pracma qpcR robustbase testthat visdat zoo]; }; PCS = derive2 { name="PCS"; version="1.2"; sha256="0488h6s1yz6fwiqf88z2vgckn6i0kwls8cazmpw3wspnaqvl2n4s"; depends=[multtest statmod]; }; @@ -2362,13 +2418,12 @@ in with self; { PDQutils = derive2 { name="PDQutils"; version="0.1.6"; sha256="0mmfi0ifwbkjm0274sddpwkj27cvdkwngnka8vdmfm4b2nn7vgsp"; depends=[moments orthopolynom]; }; PDSCE = derive2 { name="PDSCE"; version="1.2"; sha256="17lc6d8ly6jbvjijpzg45dvqrzrh5s1sp415nycazgpbg9ypwr2h"; depends=[]; }; PEGroupTesting = derive2 { name="PEGroupTesting"; version="1.0"; sha256="1z863ard0cc2g8ibxnmxhiqhvs53r6b8gpnavnfchm9432ifcbwi"; depends=[]; }; - PEIP = derive2 { name="PEIP"; version="2.0-1"; sha256="0zfvp3ngc4320sh6r6y746zxigr2wqgaqasnlkv3hxhzpzxq08lj"; depends=[bvls Matrix pracma RSEIS]; }; + PEIP = derive2 { name="PEIP"; version="2.2-1"; sha256="0bzynmd7azs33994dlsabxp29lncs1v2njp6iy5l62rwrnxj9y0a"; depends=[bvls fields geigen Matrix pracma RSEIS]; }; PEMM = derive2 { name="PEMM"; version="1.0"; sha256="18dd9hsbdrnhrrff7gpdqrw2jv44j8lg0v3lkcdpbd4pppcaq84h"; depends=[]; }; - PET = derive2 { name="PET"; version="0.4.9"; sha256="1ijg6mfh3xrc1gjh6a4nq64psk9yh16yc8nfp7c9837xbjigqq7f"; depends=[adimpro]; }; + PET = derive2 { name="PET"; version="0.5.0"; sha256="0k26lfkb58sdqy5b5kd7dkd7nzhxqh1b8pxyx2bdl0lx50sn94jc"; depends=[adimpro]; }; PGEE = derive2 { name="PGEE"; version="1.5"; sha256="1qcxbqnbpplnfjy83nm9fj9y4abzgbxnsggzx7ix3vb9qs18cdwh"; depends=[MASS mvtnorm]; }; - PGICA = derive2 { name="PGICA"; version="1.0"; sha256="0qxa5hw2s3mndjvk8lb82pcbyj1kbdclx4j4xa8jq0lcj180abi9"; depends=[fastICA]; }; PGM2 = derive2 { name="PGM2"; version="1.0-1"; sha256="03282pcq7gw47awc2mxjsbz6w3zpqjhqd7fzg8la4p00cd0vvmr4"; depends=[]; }; - PGRdup = derive2 { name="PGRdup"; version="0.2.3.2"; sha256="1m6511bgml76gb3pc8dgq3i30sci1hnayhmxq62farzdcd4wxnfs"; depends=[data_table ggplot2 gridExtra igraph stringdist stringi]; }; + PGRdup = derive2 { name="PGRdup"; version="0.2.3.3"; sha256="1s0v44922zpxl3w9kzn9xzvs5jldg35gjrnlf89f89i3rs59gg98"; depends=[data_table ggplot2 gridExtra igraph stringdist stringi]; }; PHENIX = derive2 { name="PHENIX"; version="1.3.1"; sha256="1gd9ycrwawi81al4f5v559km1112giwqnwvvk8ynj4kdb5bqpyq4"; depends=[ppcor SuppDists]; }; PHYLOGR = derive2 { name="PHYLOGR"; version="1.0.8"; sha256="17lmjfbwf8j68zzzhdvppyjacdsmy4zmcfj0pcjsw5j6m361hvh6"; depends=[]; }; PHeval = derive2 { name="PHeval"; version="0.5.3"; sha256="1zq4ks6w5vrhy1f170fv16zgrgi1lfxmkpfkg75sjin7asw4i7a9"; depends=[survival]; }; @@ -2377,29 +2432,31 @@ in with self; { PIPS = derive2 { name="PIPS"; version="1.0.1"; sha256="1c5v3s6xys9p1q32k6mpsffhi9gwsq951rh12hs76dmak862yspc"; depends=[]; }; PK = derive2 { name="PK"; version="1.3-3"; sha256="07qxyszj0f7qwrg5ixvciy33mjsfxxi9rk32a1fz46z8wiwfil9i"; depends=[]; }; PKI = derive2 { name="PKI"; version="0.1-5.1"; sha256="1xs3jxbczhkxnp7cyw2yh1jcwha92y9pdsbka1ligbla70bnvxyj"; depends=[base64enc]; }; - PKNCA = derive2 { name="PKNCA"; version="0.8.1"; sha256="1by2yp1ngqv06w7dfl7lbb80gnmpid4xg1yhk4zvx8bwss0ggzph"; depends=[digest dplyr lattice nlme plyr tidyr]; }; - PKPDmisc = derive2 { name="PKPDmisc"; version="2.0.0"; sha256="0rn5m5wak6lis5wck2ws934bzy8w65wj1d0l3rz8svfd8agf2ys8"; depends=[BH data_table dplyr ggplot2 lazyeval magrittr purrr Rcpp readr rlang stringr tibble]; }; + PKNCA = derive2 { name="PKNCA"; version="0.8.4"; sha256="013b4d74virwjpxq20m566ya85q31aq6bdgk5fpjrwh5ja6805ka"; depends=[digest dplyr lattice nlme plyr rlang tidyr]; }; + PKPDmisc = derive2 { name="PKPDmisc"; version="2.1.1"; sha256="1p47zdhilprzcwarfmisq7g7znr73wgxns43mn3d7w5sv671mygv"; depends=[BH data_table dplyr ggplot2 lazyeval magrittr purrr Rcpp readr rlang stringr tibble]; }; PKPDmodels = derive2 { name="PKPDmodels"; version="0.3.2"; sha256="1h893civ77ahbgjnc6kq3l7rszmqmx9dlxwavldigpq3r79vd86k"; depends=[]; }; PKgraph = derive2 { name="PKgraph"; version="1.7"; sha256="0g36cdv5cblqx69j48irxjc5nlw2cl3p714mlsblnd3362z1brwn"; depends=[cairoDevice ggplot2 gWidgetsRGtk2 lattice proto rggobi RGtk2]; }; PKreport = derive2 { name="PKreport"; version="1.5"; sha256="16hss9migbxpnw5f9gcw1nlvb81iyji00ylx5wd6kdwhz0ids9wj"; depends=[ggplot2 lattice]; }; PLIS = derive2 { name="PLIS"; version="1.1"; sha256="0b81s7677wglqvv1b5lx8k2iaks09kz0wrl07245a7j2pk9nxv7p"; depends=[]; }; - PLMIX = derive2 { name="PLMIX"; version="1.0"; sha256="1z59z7ynlfh7cskanj7drvry0fpzl5mq52as8adi2zxp2q8q032p"; depends=[abind combinat foreach FSA rcdd Rcpp]; }; + PLMIX = derive2 { name="PLMIX"; version="2.0"; sha256="1dvlzv3hajdj3cc83kkna7igzppy88dwppap12zaxnh2afwpvv7k"; depends=[abind foreach gtools label_switching MCMCpack rcdd Rcpp]; }; PLRModels = derive2 { name="PLRModels"; version="1.1"; sha256="0dwnzfw7a1cxz9s00kxf19jmjsc8cy6cc9q2mjqf8z7690wrg7hb"; depends=[]; }; PLSbiplot1 = derive2 { name="PLSbiplot1"; version="0.1"; sha256="1l8d1k913ic0qwxvrrd447p5ni3mzc6v9lv45b7vqrpzkxdci6gy"; depends=[]; }; PLmixed = derive2 { name="PLmixed"; version="0.1.2"; sha256="1pi4ivw090lbg983d8wymhk0i97jrzi1nrkrrz3llnafadysh4rh"; depends=[lme4 Matrix numDeriv]; }; PLordprob = derive2 { name="PLordprob"; version="1.0"; sha256="156lvz6vfm68hm32l5nlhq15hfacdla627d6lf8l4g34lwzdh8k8"; depends=[mnormt]; }; PMA = derive2 { name="PMA"; version="1.0.9"; sha256="11qwgw4sgzl3xhrm468bsza83h3mfn89157nfwnrassl7qr42xkq"; depends=[impute plyr]; }; - PMCMR = derive2 { name="PMCMR"; version="4.1"; sha256="0mfms8wvdwcakkgsnrb2wawp07hvlr7s6cvl54kxv7f5fqllw5kc"; depends=[]; }; + PMCMR = derive2 { name="PMCMR"; version="4.2"; sha256="1dqfn68034xkik4xfl8mlqsh7x427f7cwna5axj8gvjcj9l48x8c"; depends=[]; }; + PMCMRplus = derive2 { name="PMCMRplus"; version="1.0.0"; sha256="11sliznixsrrlr0y365hxpg64jfva8l1ilrnkdd32ddy8713sin7"; depends=[BWStest gmp kSamples MASS multcompView mvtnorm Rmpfr SuppDists]; }; PNADcIBGE = derive2 { name="PNADcIBGE"; version="0.4.0"; sha256="1lr7ycsjp9dimkbxfapl1qpvlvl0771rdipaf26sgi7iabqpz5b4"; depends=[dplyr magrittr RCurl readr readxl survey timeDate]; }; POET = derive2 { name="POET"; version="2.0"; sha256="0w3jhj45sxisyrpcsazbrbcsz7rmraw71jjm0zixbcgc4klb98ar"; depends=[]; }; POMaSPU = derive2 { name="POMaSPU"; version="1.0.0"; sha256="0jz3jgzdykv0xvfw3ix0hbs32as6dp7p5v8bj5nddknx10d0siya"; depends=[MASS matrixStats Rcpp RcppArmadillo]; }; + POPdemog = derive2 { name="POPdemog"; version="1.0.3"; sha256="0j83c853ligmw8ag4pb0vj46sfn2w2ynh4wvgkabzs688hxxni8r"; depends=[]; }; POT = derive2 { name="POT"; version="1.1-6"; sha256="08av53rnishk3mhwrb6ydbgc3n9nwi87jlx5vmag3vpiidhn1laj"; depends=[]; }; - POUMM = derive2 { name="POUMM"; version="1.3.2"; sha256="0v7wgswgqikqlhz087qg75026saqd88ml1mxp375m5nab412ng3d"; depends=[adaptMCMC ape coda data_table foreach GGally ggplot2 gsl Rcpp RcppArmadillo]; }; PP = derive2 { name="PP"; version="0.6.1"; sha256="10innn1nhc4zqimd0gww7k3k30jkfkkj89zkddcjqa2sqq5gs3xr"; depends=[Rcpp]; }; - PPCI = derive2 { name="PPCI"; version="0.1.0"; sha256="1s88m49vfla2kfpnb45ra5sfb02969ybpbi8nn24vf6ama7lg9jc"; depends=[rARPACK]; }; + PPCI = derive2 { name="PPCI"; version="0.1.1"; sha256="1f3jmrkszjq6ajbl0kjf5rghiliim96wz53mfrjjvpc6piajs5ym"; depends=[rARPACK]; }; + PPforest = derive2 { name="PPforest"; version="0.1.0"; sha256="1s0g8icyx30sih2xbdihp9xbmygfgd1hs642qdl5559fqshylbzs"; depends=[doParallel dplyr magrittr plyr Rcpp RcppArmadillo tidyr]; }; PPtree = derive2 { name="PPtree"; version="2.3.0"; sha256="002qjdx52r2h90wzrf2r3kz8fv3nwx08qbp909whn6r4pbdl532v"; depends=[MASS penalizedLDA]; }; - PPtreeViz = derive2 { name="PPtreeViz"; version="2.0.1"; sha256="02073yxdwns9mnnjvw13ydw1s3vrxl53szcd9jy8ibj78vnm57r3"; depends=[ggplot2 gridExtra partykit Rcpp RcppArmadillo]; }; - PRIMME = derive2 { name="PRIMME"; version="2.1-0"; sha256="1sjgy923ppp28qhkvhgv2xmx7b7aqd17g60af1my44ygdsd8c1kw"; depends=[Matrix Rcpp]; }; + PPtreeViz = derive2 { name="PPtreeViz"; version="2.0.3"; sha256="1x5rcls49jz19y3h98n2k4kypm8mv8p586clhdj62bvp2nl8wg3x"; depends=[ggplot2 gridExtra partykit Rcpp RcppArmadillo]; }; + PRIMME = derive2 { name="PRIMME"; version="2.2-0"; sha256="1iwwh871v87fz6j6q9nvfiq8x8nz2v87n52l80a15d5rvvxv2rbi"; depends=[Matrix Rcpp]; }; PRIMsrc = derive2 { name="PRIMsrc"; version="0.7.5"; sha256="12wfb4p8ra1b8xwq42350cxl2fy9gsrp5m7inyxnh31vplgripy9"; depends=[glmnet Hmisc quantreg superpc survival]; }; PRISMA = derive2 { name="PRISMA"; version="0.2-6"; sha256="1yzcx4js0xaxp1mp7ginhfz8jji49rkw3x15a9mlmpz260gkfs98"; depends=[ggplot2 gplots Matrix]; }; PRISMAstatement = derive2 { name="PRISMAstatement"; version="1.0.1"; sha256="1qk9cljk52m8rcasck8cl7gwzhcsx0p58jn31izy2j027w0rns7j"; depends=[DiagrammeR]; }; @@ -2416,24 +2473,26 @@ in with self; { PSCBS = derive2 { name="PSCBS"; version="0.63.0"; sha256="0pgha1rvb9nfxkr8fxc17zgws781qwmrl01rss7bd0sf2n2lw2k2"; depends=[aroma_light DNAcopy future listenv matrixStats R_cache R_methodsS3 R_oo R_utils]; }; PSF = derive2 { name="PSF"; version="0.4"; sha256="1hjry8vjqr6zk2i2ppf3fcpsr4v4jm1705qv6i1iz2agl6g2rcnp"; depends=[cluster data_table forecast knitr]; }; PSIMEX = derive2 { name="PSIMEX"; version="1.1"; sha256="0cndzasvg4y49incyd9nfz8y3z88ywbc7xk0zzjir665pv2xn23b"; depends=[knitr MCMCglmm pedigree plotrix]; }; - PSLM2015 = derive2 { name="PSLM2015"; version="0.1.0"; sha256="1p5hygsqzk1r78ilxahyv43x1xvy9jnh2khmv9v8di5ir21asxga"; depends=[dplyr]; }; + PSLM2015 = derive2 { name="PSLM2015"; version="0.2.0"; sha256="1f8kzlqil2ac8a9fbj9fhdni2narh2yaaz044mlx7gsv2ns3ai19"; depends=[dplyr ggplot2 magrittr]; }; PSM = derive2 { name="PSM"; version="0.8-11"; sha256="1p1a8k0c44z75vsh55yni5gxmw6znxw4x1mjbgwj59y1k3pf2aiv"; depends=[deSolve MASS numDeriv ucminf]; }; + PSPManalysis = derive2 { name="PSPManalysis"; version="0.1.1"; sha256="1mbgfblxflk12vr8y70a6avzjz9jh2m0wkmnzg0njgcwaqwvhlpm"; depends=[devtools]; }; PST = derive2 { name="PST"; version="0.94"; sha256="0f28zrnlficbi9iil6wbh51k9mghpkz63hw05lpmlpx1yl5nd0a6"; depends=[RColorBrewer TraMineR]; }; PSTR = derive2 { name="PSTR"; version="1.1.0"; sha256="1wzbwll5c2qsvngzqycg2zk6dghbr45mk8chj6kzzppmkk7vzj47"; depends=[ggplot2 snowfall tibble]; }; - PSW = derive2 { name="PSW"; version="1.1-2"; sha256="1bq82czs32qwfmh8iim79cpwnlg8naqlpq1d64a2x1c50qkdzdla"; depends=[gtools Hmisc]; }; + PSW = derive2 { name="PSW"; version="1.1-3"; sha256="0ahm7rp795d7j88n15b3q0gl573p3g0krc7jd1zv87g4bsdc9b5x"; depends=[gtools Hmisc]; }; PTAk = derive2 { name="PTAk"; version="1.2-12"; sha256="1phxh2qbzsj2ia2dr6z30lhi765lk1m8lbk57sdgvm14fmi9v5nk"; depends=[tensor]; }; PTE = derive2 { name="PTE"; version="1.6"; sha256="0y2zqvm2d9minpc22ndq6mar3brbv9k6s1apl19zwpc8h5g3jx5l"; depends=[doParallel foreach survival]; }; - PTXQC = derive2 { name="PTXQC"; version="0.92.0"; sha256="1p9rkcgqbvd477p05fzg7ngdjwy8y7nzplpblz9z78y92y191nl9"; depends=[data_table ggdendro ggplot2 gridExtra gtable kableExtra knitr plyr proto RColorBrewer reshape2 rmarkdown seqinr yaml]; }; + PTXQC = derive2 { name="PTXQC"; version="0.92.3"; sha256="1spkbjji36s2dlhm5b8svpnjmana2jy1ppa0pfgjg7rpsp3369xq"; depends=[data_table ggdendro ggplot2 gridExtra gtable kableExtra knitr plyr proto RColorBrewer reshape2 rmarkdown seqinr yaml]; }; + PUlasso = derive2 { name="PUlasso"; version="2.2"; sha256="0chk26ll134fqvaqdwdnm49vbvklbrxm0j0qkcydm166p24k8n2z"; depends=[BH Matrix Rcpp RcppEigen]; }; PVAClone = derive2 { name="PVAClone"; version="0.1-6"; sha256="0fj5p3z2cwnyshrr4rq88wpij2xax5p4aq0x4p342kadx9d6x2ga"; depends=[coda dclone dcmle]; }; PWD = derive2 { name="PWD"; version="1.0"; sha256="0ksr3biaqd4p5a4lv28i4cwk1fn9822ndq2161mgvc1c344p06fj"; depends=[Rcpp RcppArmadillo]; }; PWEALL = derive2 { name="PWEALL"; version="1.2.0"; sha256="0h7azgns88qwgdp41v35v6293xqs2hksbr82p15n754ci2hsvzja"; depends=[survival]; }; - PWFSLSmoke = derive2 { name="PWFSLSmoke"; version="0.99.9"; sha256="019kggrp956jry59qg5s2jwy7mcg3vvjf9741q2zvxhr0dqn86ps"; depends=[cluster dplyr dygraphs futile_logger ggmap httr leaflet lubridate mapproj maps maptools MazamaSpatialUtils openair png RColorBrewer RCurl readr reshape2 RgoogleMaps sp stringr xts zoo]; }; + PWFSLSmoke = derive2 { name="PWFSLSmoke"; version="1.0.10"; sha256="1c32bf7wlsmj0wqwcd6v4ghfrj6snaqa6q3a09p1gbvxd7mzs731"; depends=[cluster dplyr dygraphs futile_logger ggmap httr jsonlite leaflet lubridate magrittr mapproj maps maptools MazamaSpatialUtils openair png raster RColorBrewer readr reshape2 rgdal RgoogleMaps sp stringr xts zoo]; }; PabonLasso = derive2 { name="PabonLasso"; version="1.0"; sha256="158xg9i13nqy1bnpch8r6a7yas01hsdidmcypgccmyh7d7l52mr1"; depends=[]; }; Pade = derive2 { name="Pade"; version="0.1-4"; sha256="1kx5qpxd3x43bmyhk8g2af44hz3prhnrzrm571kfjmak63kym741"; depends=[]; }; PairViz = derive2 { name="PairViz"; version="1.2.1"; sha256="0mjp5p6n5azbhrm2hvb9xyqjfhd49pw9ia8k70749yc96ws1qqc7"; depends=[graph gtools TSP]; }; - PairedData = derive2 { name="PairedData"; version="1.0.1"; sha256="025h5wjsh9c78bg6gmg6p6kvv2s6d5x7fzn3mp42mlybq0ry78p0"; depends=[ggplot2 gld lattice MASS mvtnorm]; }; + PairedData = derive2 { name="PairedData"; version="1.1.0"; sha256="1wga7cln8gvbvxycbbd859vq6gyjjvmcqvvzqmqdpwcdjf2j47gz"; depends=[ggplot2 gld lattice MASS mvtnorm]; }; PairwiseD = derive2 { name="PairwiseD"; version="0.9.62"; sha256="19qjms99gf7s39nwwgj56n8426d0gw80dipz165sk3km4zb2mcwv"; depends=[openxlsx xlsx]; }; - PakPC2017 = derive2 { name="PakPC2017"; version="0.3.0"; sha256="0cm6yjplc49qkvash9lswf0k6j92m0arwgk51y5xczixhz4xlg2n"; depends=[curl data_table]; }; + PakPC2017 = derive2 { name="PakPC2017"; version="1.0.0"; sha256="196jvhv7pv4pvnnz9izk6icxv3aml26mif0w6g4907izyszf8cal"; depends=[dplyr magrittr]; }; PakPMICS2014Ch = derive2 { name="PakPMICS2014Ch"; version="0.1.0"; sha256="0gjrx34613d9wzal292zfzh8hmkav271fqb0skdxd1f8rs2c79dg"; depends=[data_table]; }; PakPMICS2014HH = derive2 { name="PakPMICS2014HH"; version="0.1.0"; sha256="1n6cyanqafscizgi1xqmc19w59yigxk5mvqinbivpdr7rydhrac6"; depends=[data_table]; }; PakPMICS2014HL = derive2 { name="PakPMICS2014HL"; version="0.1.0"; sha256="18i5p54zmqxph0lkbgz4ahrbmi2jwhjwdca7aqvx9az18ki5c9sx"; depends=[data_table]; }; @@ -2448,8 +2507,9 @@ in with self; { ParamHelpers = derive2 { name="ParamHelpers"; version="1.10"; sha256="0nzsl3hby4dhnp7rw47zjmdrrfsgp5w1ai9fpw3bgc4k5sk9nql0"; depends=[BBmisc checkmate]; }; ParentOffspring = derive2 { name="ParentOffspring"; version="1.0"; sha256="117g8h0k65f2cjffigl8n4x37y41rr2kz33qn2awyi876nd3mh93"; depends=[]; }; ParetoPosStable = derive2 { name="ParetoPosStable"; version="1.1"; sha256="1fwji5wrhbxr089dll812csamvb5q2pxn1607rpirarifgfbj28m"; depends=[ADGofTest doParallel foreach lmom]; }; + PartCensReg = derive2 { name="PartCensReg"; version="1.38"; sha256="16f64w7ngaj37n8imqqh50w15lrknr0w45ns7bg75lnap9y2qhml"; depends=[Matrix optimx ssym]; }; Partiallyoverlapping = derive2 { name="Partiallyoverlapping"; version="1.0"; sha256="1wwfq0zwf2b2wlq4pwhw92d02f715l7bkc0si7gndk0mp2pibcrx"; depends=[]; }; - PathSelectMP = derive2 { name="PathSelectMP"; version="1.0"; sha256="19gkd7il4whxp1mm4pinlrl8yj09b5sknz8c4g75n2hhh96libns"; depends=[mice MplusAutomation]; }; + PathSelectMP = derive2 { name="PathSelectMP"; version="1.1"; sha256="036b70bpylmibny6dny79f7gdzn78arqgl2hfs031vygw63yyh9b"; depends=[mice MplusAutomation]; }; PatternClass = derive2 { name="PatternClass"; version="1.7.1"; sha256="11r4p4s2pm0c4fmnpijzz5srhpai444mbx5nszhkssfsp9rh7cm9"; depends=[SDMTools]; }; PdPDB = derive2 { name="PdPDB"; version="2.0.1"; sha256="05aqg0rqrnlmvjxa32ms1vywgwhw5zlfkyf2ij0fn06rp8l2z3lv"; depends=[dendextend plyr tseries]; }; Peacock_test = derive2 { name="Peacock.test"; version="1.0"; sha256="0ypvwywipyh8lm8xkazsfjgjpvvyi2g8kid63qff11372p33m6xs"; depends=[]; }; @@ -2476,8 +2536,9 @@ in with self; { PersomicsArray = derive2 { name="PersomicsArray"; version="1.0"; sha256="1d5gxd65b01m13rgbdhk6w3l43vqcbdk0s1pbgc8h6cnipj55z0i"; depends=[jpeg raster stringr tiff]; }; PhViD = derive2 { name="PhViD"; version="1.0.8"; sha256="038pw24sb8ja8pbbmj05rww6413i2ljybb2dxwgrpffv22aqawmc"; depends=[LBE MCMCpack]; }; PharmPow = derive2 { name="PharmPow"; version="1.0"; sha256="0gabkd8p4zsig9p697lyk8m2jxb5abjk81rpzd5ih1yk1qanhsn5"; depends=[scatterplot3d]; }; + Phase123 = derive2 { name="Phase123"; version="1.4"; sha256="1iw0xgfsvfzrhcnfxvq6rcwfcycyvc2bbg8d7g2spvvjk7aa4bwd"; depends=[Rcpp RcppArmadillo survival]; }; PhaseType = derive2 { name="PhaseType"; version="0.1.3"; sha256="092dqyqfaxj8qpwxcjb5cayhnq597rfjz1xb93ps4nrczycqs0l6"; depends=[coda ggplot2 reshape]; }; - PhenotypeSimulator = derive2 { name="PhenotypeSimulator"; version="0.1.3"; sha256="1gjhrdy3pd9y13akqcfp50h241lvlyxsrzd860jg11x7hgkzhzb1"; depends=[mvtnorm optparse plyr R_utils Rcpp snpStats]; }; + PhenotypeSimulator = derive2 { name="PhenotypeSimulator"; version="0.2.0"; sha256="1vnissx2p10w2w435vr2jqw50cs5518l1gpq4pkyyxckcrd300w9"; depends=[data_table dplyr ggplot2 mvtnorm optparse R_utils Rcpp reshape2 snpStats zoo]; }; Phxnlme = derive2 { name="Phxnlme"; version="1.0.0"; sha256="0h9mi8p95rp1s8xsdv38j9fpy2cy9zvjnldjmnj0n469kimp2782"; depends=[ggplot2 gridExtra lattice manipulate testthat]; }; PhyInformR = derive2 { name="PhyInformR"; version="1.0"; sha256="10d720ww909b1xmdrms554pnn0757nzppnrniar4n157mh0qw7ms"; depends=[ape doParallel foreach geiger ggplot2 gplots gridExtra hexbin iterators PBSmodelling phytools RColorBrewer]; }; PhySortR = derive2 { name="PhySortR"; version="1.0.7"; sha256="1xpxkd2bf3xdsfwa0bzkppr6y7p6v7s4iy0x0m8fiwj93n9jh0pz"; depends=[ape phytools]; }; @@ -2488,8 +2549,9 @@ in with self; { PieceExpIntensity = derive2 { name="PieceExpIntensity"; version="1.0.1"; sha256="0agy9jp5vbh6cj5mipbmn11m69w4ydz91nprph0jyf1drl92730h"; depends=[Rcpp RcppArmadillo]; }; Pijavski = derive2 { name="Pijavski"; version="1.0"; sha256="1027lmmk17br9zxah980j6l3k2p92065bwigw6gpy9g0g5jjl4f1"; depends=[Rcpp]; }; PivotalR = derive2 { name="PivotalR"; version="0.1.18.3"; sha256="14l7y57zmfr7h4bq01j83am2plxx320kkhbsh0x2ypif9dni4rf2"; depends=[Matrix]; }; + PlackettLuce = derive2 { name="PlackettLuce"; version="0.2-2"; sha256="0lzgffw5kbx9psd68r7yigqv8dszjb2xkayxm3rhfs8jv9309yr0"; depends=[igraph MASS Matrix partykit psychotools qvcalc rARPACK sandwich]; }; Planesmuestra = derive2 { name="Planesmuestra"; version="0.1"; sha256="0v7l4hrfckcf7zmk0ihq2ij0qli7x12j17vd6752d1yjk27fgk57"; depends=[]; }; - PlasmaMutationDetector = derive2 { name="PlasmaMutationDetector"; version="1.6.2"; sha256="0b9m3qrv5nndqly9s4fjbwzkxdkwvai55yqrgbr91vagbmv17v9w"; depends=[GenomicRanges ggplot2 robustbase Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; + PlasmaMutationDetector = derive2 { name="PlasmaMutationDetector"; version="1.6.10"; sha256="1dqc6k7mq9k6g9gndgjm6cf61mgl0liy4qwpzragbhq6lym8hw6w"; depends=[GenomicRanges ggplot2 robustbase Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; Plasmidprofiler = derive2 { name="Plasmidprofiler"; version="0.1.6"; sha256="10m3knmz0596rm30ncyfprar6l42bjm7r34n4pjz1biqmiz6yz6k"; depends=[ape dplyr gdata ggdendro ggplot2 gridExtra gtable htmlwidgets magrittr plotly plyr RColorBrewer reshape2 stringr]; }; Plasmode = derive2 { name="Plasmode"; version="0.1.0"; sha256="1qcni9zdckhsnw616jn7rdfd09kbl5wd4hljdja0w73jz1wd1z14"; depends=[arm epiDisplay foreign gbm glm2 lattice latticeExtra lme4 MASS Matrix mgcv nlme nnet RColorBrewer survey survival twang xtable]; }; PlayerRatings = derive2 { name="PlayerRatings"; version="1.0-1"; sha256="0fdk70vfxgmf2hy6j0djbksi5znvilsi74rrbqd0lfhi841j15qj"; depends=[]; }; @@ -2498,19 +2560,20 @@ in with self; { PoSI = derive2 { name="PoSI"; version="1.0"; sha256="0c08czjvm09mcnkqnas4l22v22r9akgklnacx1j62smk4m546q2m"; depends=[]; }; PogromcyDanych = derive2 { name="PogromcyDanych"; version="1.5"; sha256="1m6sycca44h8kdf9cd67annw6dxxwiscidzfnjrzqmqa4v6n7rsg"; depends=[dplyr SmarterPoland]; }; PoiClaClu = derive2 { name="PoiClaClu"; version="1.0.2"; sha256="1j593sc344h9iy7if1ppihx2qd73dv32d77d8ckac43i7b2lig24"; depends=[]; }; - PoisBinNonNor = derive2 { name="PoisBinNonNor"; version="1.1"; sha256="02xa028jrc50fmrasidjsh5h6z9i8gyyc68q6809ic1bs23sq06i"; depends=[BB corpcor Matrix mvtnorm]; }; - PoisBinOrd = derive2 { name="PoisBinOrd"; version="1.2"; sha256="0ig3iqj0h2v4a4ahf8l2nfvjx4846skkdk5sb7qab8bkqqqkmbpy"; depends=[corpcor GenOrd Matrix mvtnorm]; }; - PoisBinOrdNonNor = derive2 { name="PoisBinOrdNonNor"; version="1.3"; sha256="0cwp9zkw89bdvak7jrjmw0n1c1xkkw0kb1l5kn8vrpm7xkwzva8h"; depends=[BB corpcor GenOrd MASS Matrix]; }; - PoisBinOrdNor = derive2 { name="PoisBinOrdNor"; version="1.4"; sha256="0sgj76crzb7byi0nbx50y0v8zr02b8jl1qfzapj46l2f8z78vkrm"; depends=[corpcor GenOrd Matrix mvtnorm psych]; }; - PoisNonNor = derive2 { name="PoisNonNor"; version="1.3"; sha256="0p39sad9wiwrhgg9vdx0gzgd4kf2wwxjzmyav04q8ijbmqp0mjbw"; depends=[BB corpcor MASS Matrix]; }; - PoisNor = derive2 { name="PoisNor"; version="1.1"; sha256="0z5h8rdb7kjqzasrdvkpkvwv05rfazv92cza8pln1qrvi6cdk5f3"; depends=[corpcor Matrix mvtnorm]; }; + PoisBinNonNor = derive2 { name="PoisBinNonNor"; version="1.2"; sha256="0lvbkbpfm4iva7fmxm1hmma20hnbcsrd1jpy1kq3l60lmxk031wi"; depends=[BB corpcor Matrix mvtnorm]; }; + PoisBinOrd = derive2 { name="PoisBinOrd"; version="1.3"; sha256="122z4mqig8hrqlislmazcpjg6q47pmi1pmpw93kyg81016p2gmxi"; depends=[corpcor GenOrd Matrix mvtnorm]; }; + PoisBinOrdNonNor = derive2 { name="PoisBinOrdNonNor"; version="1.4"; sha256="14xmq1rcx901fd96aivq6m2vrcj8h1p1pxwkfjpn5dh4kqfy7921"; depends=[BB corpcor GenOrd MASS Matrix]; }; + PoisBinOrdNor = derive2 { name="PoisBinOrdNor"; version="1.5"; sha256="03jgd2f7wvk7nhpkzrbjx8y4ymwgf53hxbz89ydmjk039flsp6x6"; depends=[corpcor GenOrd Matrix mvtnorm psych]; }; + PoisNonNor = derive2 { name="PoisNonNor"; version="1.4"; sha256="1hmgwk6lr9pm06qp2n27n6j3i8q4m8zrc1hy061pix13k4idagz1"; depends=[BB corpcor MASS Matrix]; }; + PoisNor = derive2 { name="PoisNor"; version="1.2"; sha256="0jpndpxajv598lpk2bx0np0yzfh1k903hpdadr4labpbjmr4pfrr"; depends=[corpcor Matrix mvtnorm]; }; PoissonSeq = derive2 { name="PoissonSeq"; version="1.1.2"; sha256="1hhx0gv06cp6hm6h36mqy411qn9x15y45crpzbyf8crfs85c6gbg"; depends=[combinat]; }; PoloniexR = derive2 { name="PoloniexR"; version="0.0.1"; sha256="1qik272z5lmzv9k1kfr5v0m8sydbdhbrc732n1zpwnqc1spfqb20"; depends=[anytime digest httr jsonlite RApiDatetime xts zoo]; }; PolyPatEx = derive2 { name="PolyPatEx"; version="0.9.2"; sha256="1z1hwvsw7b6cz5xfy35a5ldrzb3fhp3swiyz56v1zqblpsaz8n9g"; depends=[gtools]; }; PolyTrend = derive2 { name="PolyTrend"; version="1.2"; sha256="17n6phkzgaqrlzs8x1l5smnij1gxfklr0zj9pqfy5n8xqnpwssm5"; depends=[]; }; Polychrome = derive2 { name="Polychrome"; version="1.0.0"; sha256="09yxrwh7a5hgq52jv2d0b0jvwbgm1f1dg6w4vziwdx5cwyny9psl"; depends=[colorspace rgl]; }; PolynomF = derive2 { name="PolynomF"; version="1.0-1"; sha256="0sr5v43hp1ydy2230vm3mrg4pnnv7nivhnp3zni9svc8g0bd8z8p"; depends=[]; }; - Pomic = derive2 { name="Pomic"; version="1.0.3"; sha256="16c0z50zlr9vb1g3j7zdgm2nx595mbwmr4hry184fvkv2hrkk4xc"; depends=[]; }; + Pomic = derive2 { name="Pomic"; version="1.0.4"; sha256="0xy5fgimbgqqac3n7akhwyvnrvd9fpvx9h8nk4spxrxc8x0km1w7"; depends=[]; }; + PooledMeanGroup = derive2 { name="PooledMeanGroup"; version="1.0"; sha256="0i9s7qskjnji3mf6clsi69rnni57v8cysgr9gh3hvxjzlf1sq8y7"; depends=[]; }; PopED = derive2 { name="PopED"; version="0.3.2"; sha256="1lvzqpij4dqbw144ya25bhlx96mwaxz932r0bl3jsx1si9ijb8xz"; depends=[codetools dplyr ggplot2 MASS mvtnorm]; }; PopGenKit = derive2 { name="PopGenKit"; version="1.0"; sha256="0l4mbm0cyppgvcw2cbimrv29aiciyj00k8wfwcj5zr8sh7fgfhs4"; depends=[]; }; PopGenReport = derive2 { name="PopGenReport"; version="3.0.0"; sha256="0z4g7ll3dk9mgawnn7k0ysgj8w55adivc4zcrr898x399g7vnfx4"; depends=[ade4 adegenet calibrate data_table dismo gap gdistance genetics GGally ggplot2 knitr lattice mmod pegas plyr R_utils raster reshape rgdal RgoogleMaps sp vegan xtable]; }; @@ -2521,13 +2584,13 @@ in with self; { PortfolioEffectEstim = derive2 { name="PortfolioEffectEstim"; version="1.4"; sha256="1sfgkwyn7vfy3rqb1cglywiv5xmyxhzvj38vgrvfq5jf3hvzsg21"; depends=[PortfolioEffectHFT rJava]; }; PortfolioEffectHFT = derive2 { name="PortfolioEffectHFT"; version="1.8"; sha256="0y4x0d91j6g52136d921hfs5swzf85gkxafxfkf3c15dl5ns120v"; depends=[ggplot2 rJava zoo]; }; PortfolioOptim = derive2 { name="PortfolioOptim"; version="1.0.3"; sha256="1s9msqjxqxqafhncc3hi5prhzl5cj0incd5rc9fxc23l5l4n9xjx"; depends=[Rglpk]; }; - PottsUtils = derive2 { name="PottsUtils"; version="0.3-2"; sha256="05ds0a7jq63zxr3jh66a0df0idzhis76qv6inydsjk2majadj3zv"; depends=[miscF]; }; + PottsUtils = derive2 { name="PottsUtils"; version="0.3-3"; sha256="165k4sjh3kqkb8bzi68wx00yl77yfbgs70fcbpzmsmcw4g4hdpzn"; depends=[miscF]; }; PoweR = derive2 { name="PoweR"; version="1.0.6"; sha256="0p2v07wp1hqmmbf7b3mh0v4n5hbbcms9xkdhjzdfxkkbafxybc24"; depends=[Rcpp RcppArmadillo]; }; Power2Stage = derive2 { name="Power2Stage"; version="0.4-6"; sha256="1fzzvv3c7z9fb63l0wz9i0vd413mfn1dzw19kw7rnldv773lwir1"; depends=[mvtnorm PowerTOST]; }; PowerNormal = derive2 { name="PowerNormal"; version="1.2.0"; sha256="1kryqcjvgwk0l4z3gqxdiz47mha3jw5583jlb9z7ml6v7cam06sm"; depends=[]; }; PowerTOST = derive2 { name="PowerTOST"; version="1.4-6"; sha256="0fy9g1zkkxx45pz7axyhv9v9yajfwi19pxcr2bc9dih3j41kazjr"; depends=[cubature mvtnorm TeachingDemos]; }; - PowerUpR = derive2 { name="PowerUpR"; version="0.1.3"; sha256="1znhkyxl8qrs288zf0cr6sxgq6ir029fmilda0k73scc6k1jxz7f"; depends=[nloptr]; }; - PracTools = derive2 { name="PracTools"; version="0.7"; sha256="0xdszhfkmpdbii9h89lfdh5mbfyd232494p0nwq2wif47gfslcr0"; depends=[]; }; + PowerUpR = derive2 { name="PowerUpR"; version="0.2.3"; sha256="046p4mrw50k1a0m672i2zx5vxfpyggiazp95qz8kx6bnq472ixp2"; depends=[]; }; + PracTools = derive2 { name="PracTools"; version="0.8"; sha256="0hmdsm1ya6fw0f2fv4b85bkr35vlqmjf1sd9jmw1d4izpifv187h"; depends=[]; }; PreKnitPostHTMLRender = derive2 { name="PreKnitPostHTMLRender"; version="0.1.0"; sha256="1749cd734f4bf0n4068s2m617k6as8h9bwp44mm3la2xy3vjf5g1"; depends=[knitr rmarkdown XML]; }; PreProcess = derive2 { name="PreProcess"; version="3.1.4"; sha256="0zvy7wx9wfsdcvnjdr1angh0shqwhlm48byc0ymciqlx6xagaw0b"; depends=[oompaBase]; }; PreciseSums = derive2 { name="PreciseSums"; version="0.1"; sha256="14d42n1wby1srrjyi0yc565g2ldmxy3r3z5bf7ki2x6snj569n0g"; depends=[]; }; @@ -2539,7 +2602,8 @@ in with self; { PrevMap = derive2 { name="PrevMap"; version="1.4.1"; sha256="1hmvfk5zpflwncaiy2rr0jr2gr2gk66na6ks82b6dfgk8xdc8xmk"; depends=[geoR Matrix maxLik numDeriv pdist raster splancs truncnorm]; }; PrivateLR = derive2 { name="PrivateLR"; version="1.2-21"; sha256="1jwq8f0dnngj8sfbmcmxy34nkkq6yjw0mq3w1f8rasz67v3bwzp3"; depends=[]; }; ProDenICA = derive2 { name="ProDenICA"; version="1.0"; sha256="04gnsnd0xzw3bfbssdp06bar0lk305ry2c97pmwxgiz3ay88dfsj"; depends=[gam]; }; - ProFit = derive2 { name="ProFit"; version="1.0.2"; sha256="0wqm5c3syrpkbb7rwkfgfbva52a0bjbl8fl8rxi624vc4rwicr87"; depends=[fftw FITSio LaplacesDemon magicaxis R2Cuba RColorBrewer Rcpp]; }; + ProFit = derive2 { name="ProFit"; version="1.1.0"; sha256="1r6afjz4ynds5aykn3vzg7k5pqqnsfbki8s4z49fv1y0gnr77zac"; depends=[celestial fftw FITSio LaplacesDemon magicaxis R2Cuba RColorBrewer Rcpp]; }; + ProFound = derive2 { name="ProFound"; version="1.0.0"; sha256="1qv6bzd800xs26j49hsqv324nz2981imf2hnllf0rgpxcf382nhi"; depends=[celestial data_table FITSio magicaxis]; }; ProNet = derive2 { name="ProNet"; version="1.0.0"; sha256="10r0gcxv0djrw99nd6a1jrnwvqmidw10ll645gvkp8l39li0107n"; depends=[igraph linkcomm MCL Rcpp]; }; ProTrackR = derive2 { name="ProTrackR"; version="0.3.5"; sha256="19ilj03w5jpc1hw5avyb780iy3rdbby3kliym0si2zv6gyi9k541"; depends=[audio lattice signal tuneR XML]; }; ProbForecastGOP = derive2 { name="ProbForecastGOP"; version="1.3.2"; sha256="0fnw3g19lx4vs8vmn4qdirvybkiy2cxkhwkn9qa3phz45iixnvx4"; depends=[fields RandomFields]; }; @@ -2549,10 +2613,10 @@ in with self; { ProfileLikelihood = derive2 { name="ProfileLikelihood"; version="1.1"; sha256="16cdp1nimhg1sd2x0qbffm7clgk54p0838y688z8lnsrjaggmb0x"; depends=[MASS nlme]; }; ProgGUIinR = derive2 { name="ProgGUIinR"; version="0.0-4"; sha256="0srhk42ssx4i096sbs4jacqjsc1ffqjxjgvpplzshlqaby1h3795"; depends=[ggplot2 MASS svMisc]; }; ProjectTemplate = derive2 { name="ProjectTemplate"; version="0.8"; sha256="0kagahw30m0drlda75hgwbpp7cqrxyf1512ar56qlgm8z73hab3n"; depends=[]; }; - ProjectionBasedClustering = derive2 { name="ProjectionBasedClustering"; version="1.0.5"; sha256="00r6hy86v9j4n55kpbh410hlaiprz41ipgyrkvqcvrsd3c1qs0h9"; depends=[deldir GeneralizedUmatrix geometry ggplot2 Rcpp shiny shinyjs vegan]; }; + ProjectionBasedClustering = derive2 { name="ProjectionBasedClustering"; version="1.0.6"; sha256="0hx8v18m0wymbjjccy8sm34sqchs9gsf6piyhbs50nm00dqiamv6"; depends=[deldir GeneralizedUmatrix geometry ggplot2 Rcpp shiny shinyjs vegan]; }; ProliferativeIndex = derive2 { name="ProliferativeIndex"; version="1.0.0"; sha256="1baf4v9c2pqqmlgxs1jf7fhwqbsw0l1g7rdiia21acxix2j3b7wj"; depends=[]; }; PropCIs = derive2 { name="PropCIs"; version="0.2-5"; sha256="0wnc5h4390w4rglr7gjh6827f5r7gdhajx1iwp5fggdlm808hgq7"; depends=[]; }; - PropClust = derive2 { name="PropClust"; version="1.4-2"; sha256="13ac895i7ljayyqcjjmwvwar6wf1j0qssazcb5nlz8rw155qwavs"; depends=[dynamicTreeCut flashClust]; }; + PropClust = derive2 { name="PropClust"; version="1.4-3"; sha256="0k1wn62vlrddzhknyjpizpqxzrgl38frncql3mrlwakkn0kh8l5z"; depends=[dynamicTreeCut flashClust]; }; PropScrRand = derive2 { name="PropScrRand"; version="1.1"; sha256="0cj62dzg4zm8d1g8h7qmviiwm93cwplppbi0p674fmmf1wy84v9s"; depends=[]; }; ProteinDescriptors = derive2 { name="ProteinDescriptors"; version="0.1.0"; sha256="1ydm8aym1wwxmfh4krh84nmj1wkgb574igg1sywl58l3qlnhya0l"; depends=[]; }; Przewodnik = derive2 { name="Przewodnik"; version="0.16.12"; sha256="1aq80aqflfm1ypqa51h10mc3g0qdr651j6g1b7008k7h0ryq42gv"; depends=[PBImisc PogromcyDanych]; }; @@ -2565,12 +2629,11 @@ in with self; { PubMedWordcloud = derive2 { name="PubMedWordcloud"; version="0.3.5"; sha256="0vpd48daamd9q3mdr59sx7zj86qcq2yx8bnrzblyx0ryqx6jnq8m"; depends=[RColorBrewer RCurl stringr tm wordcloud XML]; }; Publish = derive2 { name="Publish"; version="2017.10.24"; sha256="14zbbchff4mjvsxs9c2bypqdsfbnnl6lvr0k5v50wkd00avnv9s7"; depends=[data_table lava multcomp prodlim survival]; }; PurBayes = derive2 { name="PurBayes"; version="1.3"; sha256="0nbm4cyrwfbwwbjbjkylr86cshaqbvbif6dkp4fag8kbcgyyx5qh"; depends=[rjags]; }; - PwrGSD = derive2 { name="PwrGSD"; version="2.000"; sha256="0qxvws9mfrnqw5s24qhqk6cbffjm13z7awyxdmnilazghpiq1p7s"; depends=[survival]; }; - PythonInR = derive2 { name="PythonInR"; version="0.1-3"; sha256="0p4h30wqsz8czz6r4xjg5q79190hq242x9fsaw7v5433px1gmr44"; depends=[pack R6]; }; - QCA = derive2 { name="QCA"; version="3.0"; sha256="1fszjkjqwb7h5dpf92hgbyyv5hmhprv40viasykj671nkr13zpmc"; depends=[fastdigest shiny venn]; }; - QCAGUI = derive2 { name="QCAGUI"; version="2.5"; sha256="1v15rd5wmdx1zdssklbchw71cr9v1mjp1mfkv5kg2xa3hp0x2hz9"; depends=[QCA]; }; + PwrGSD = derive2 { name="PwrGSD"; version="2.2"; sha256="0z42l7vb3yya59g9rymypfzjbbs5zkknwgcl710rqa64l421sp8z"; depends=[survival]; }; + PythonInR = derive2 { name="PythonInR"; version="0.1-4"; sha256="0krr5k0y9rggzq8f74nc6pyf47g8va1lvva31vc774hbb0rmr7gf"; depends=[pack R6]; }; + QCA = derive2 { name="QCA"; version="3.1"; sha256="1nfwfv19rjqba28kmz9yk78zaq9jiiap8yhr0qcpf41q7381sn7q"; depends=[fastdigest shiny venn]; }; QCAfalsePositive = derive2 { name="QCAfalsePositive"; version="1.1.1"; sha256="03qzb6vdnbri52gfx3laz14988p2swdv9m8i5z7gpsv3f3bjrxbp"; depends=[]; }; - QCApro = derive2 { name="QCApro"; version="1.1-1"; sha256="0rp1mcgp21m4wi301kwb7vzilb4z0pq78h9wavkpyxnq0ch6hnlh"; depends=[lpSolve]; }; + QCApro = derive2 { name="QCApro"; version="1.1-2"; sha256="1glfb1x1h05cs07nq5glqvlil58wp3c0kaxi1l7k94y797i8r7hq"; depends=[lpSolve]; }; QCAtools = derive2 { name="QCAtools"; version="0.2.3"; sha256="1q49l2mf02hqvz2ahqjdx7i3yxniy7dn2s74xjl9l6zdq8bypfw2"; depends=[directlabels ggplot2 QCA stringr]; }; QCEWAS = derive2 { name="QCEWAS"; version="1.1-0"; sha256="0snqg1q9848g8gmxxlz1fhw4cnfxwp28qkfyrpc0yzmkswvysx6v"; depends=[]; }; QCGWAS = derive2 { name="QCGWAS"; version="1.0-8"; sha256="1wn1kddgfmqv326pihnavbgsbd2yxrlq5s2xgi6kbprssxvj8bk1"; depends=[]; }; @@ -2586,12 +2649,11 @@ in with self; { QPot = derive2 { name="QPot"; version="1.1"; sha256="1ivkk5wdd1lp6v4hwmpr9g230kd7zgmj0vnv5fw0svwpb8zzz14x"; depends=[MASS]; }; QQperm = derive2 { name="QQperm"; version="1.0.1"; sha256="06xhv54zgnx8i22j23a0dqxhh7my416idpkkwq93qd1rdzgamzc8"; depends=[]; }; QRAGadget = derive2 { name="QRAGadget"; version="0.1.0"; sha256="0vmhbpfbbpbcs6s9zjam893yl54spbx4x4698c504g96hcc19kkp"; depends=[htmlwidgets leaflet magrittr miniUI raster scales shiny sp]; }; - QRFCCA = derive2 { name="QRFCCA"; version="1.0"; sha256="1h130fvdli57i3zhs51x96r77icpf00ffp7nf6k47gqy9lgbk4n3"; depends=[corpcor fda flare igraph MASS]; }; QRM = derive2 { name="QRM"; version="0.4-13"; sha256="0zxhm1bdbs4jizd909vw9yjdn484vmcrwcmpk3a7gr4142q9kdjh"; depends=[gsl Matrix mgcv mvtnorm numDeriv Rcpp timeDate timeSeries]; }; QRank = derive2 { name="QRank"; version="1.0"; sha256="1f924r5bf5vjfl12hk1n5m3f94g30f6vmvzq2bn8295dflyndck0"; depends=[quantreg]; }; QRegVCM = derive2 { name="QRegVCM"; version="1.1"; sha256="01dhc0r1nialwv7dp2108znyc3ip1hswkcbpf3kmabxxj5y4vyvx"; depends=[quantreg SparseM truncSP]; }; QSARdata = derive2 { name="QSARdata"; version="1.3"; sha256="0dhldnh0jzzb4assycc0l14s45ymvha48w04jbnr34lrwgr9krh4"; depends=[]; }; - QTLRel = derive2 { name="QTLRel"; version="0.2-17"; sha256="0csn7xijzdw9wnsd7ilm3fjn2zrv87i8dqwvkm9d7qs5ssxsi44v"; depends=[gdata lattice]; }; + QTLRel = derive2 { name="QTLRel"; version="1.0"; sha256="0hlnh04w45imf0f7rm9pg1whlps5zxh00qvvn81hip16bv48cw79"; depends=[gdata lattice]; }; QUIC = derive2 { name="QUIC"; version="1.1"; sha256="021bp9xbaih60qmss015ycblbv6d1dvb1z89y93zpqqnc2qhpv3c"; depends=[]; }; QVM = derive2 { name="QVM"; version="0.1.1"; sha256="0dnr4h4084n505vrxfrx3czrkqdbna8s4fxpwr5czfilbfbxhpar"; depends=[gWidgets IMPACT ltm multilevel mvtnorm nlme pander psych]; }; QZ = derive2 { name="QZ"; version="0.1-6"; sha256="1vgqwv3rbnmz2sgbmbivgnxcwy5dzgk6ivqskdnqkil4f10zflmi"; depends=[Matrix]; }; @@ -2605,21 +2667,21 @@ in with self; { QuantifQuantile = derive2 { name="QuantifQuantile"; version="2.2"; sha256="01bdz8a6nhjil6n2z62x5g41v3d6md5v16g0ladsl5zc8raivqdq"; depends=[rgl]; }; QuantileGradeR = derive2 { name="QuantileGradeR"; version="0.1.1"; sha256="1zwc6bg636gk8zll7wpznd3pzl611hcj2fmzp8b9505rra13p0g2"; depends=[]; }; QuantumClone = derive2 { name="QuantumClone"; version="1.0.0.6"; sha256="1520jgkzp8g7gv7ggqhvlrdnpdyhygqjgsd1my5jq30afdqj6qmp"; depends=[DEoptim doParallel foreach fpc ggplot2 gridExtra NbClust optimx]; }; - QuasiSeq = derive2 { name="QuasiSeq"; version="1.0-10-1"; sha256="05d47cc632sgi0bjwx408dq0nx7ylkf3l6ln4bf191l40hr1r4j7"; depends=[edgeR mgcv pracma uniqueAtomMat]; }; - R_cache = derive2 { name="R.cache"; version="0.12.0"; sha256="006x52w9r8phw5hgqmyp0bz8z42vn8p5yibibnzi1sfa1xlw8iyx"; depends=[digest R_methodsS3 R_oo R_utils]; }; + R_cache = derive2 { name="R.cache"; version="0.13.0"; sha256="1hf5cb7xvnca5zlh9245b5g62sgsaxwdhiv7x59yld37cydakm6k"; depends=[digest R_methodsS3 R_oo R_utils]; }; R_devices = derive2 { name="R.devices"; version="2.15.1"; sha256="09gmzb87n1ybqwyp4jdpih3w3s7nqkr4hd1qhcqr57kp2pj9jp9x"; depends=[base64enc R_methodsS3 R_oo R_utils]; }; - R_filesets = derive2 { name="R.filesets"; version="2.11.0"; sha256="0hjmd86zqsd9v17ma9r734pk9b0k53ayb52w5mm19d9hnl3wnv08"; depends=[digest future R_cache R_methodsS3 R_oo R_utils]; }; + R_filesets = derive2 { name="R.filesets"; version="2.12.0"; sha256="16djdiwl4rpyhc75q2dpyfpzf2gwqkg9rbk99fbx69my1if0vs7w"; depends=[digest future_apply R_cache R_methodsS3 R_oo R_utils]; }; R_huge = derive2 { name="R.huge"; version="0.9.0"; sha256="13p558qalv60pgr24nsm6mi92ryj65rsbqa6pgdwy0snjqx12bgi"; depends=[R_methodsS3 R_oo R_utils]; }; R_matlab = derive2 { name="R.matlab"; version="3.6.1"; sha256="013qi3iikikgib23cqg74vpp2ymsbw1zd6zny7m1km2js6gmfchh"; depends=[R_methodsS3 R_oo R_utils]; }; R_methodsS3 = derive2 { name="R.methodsS3"; version="1.7.1"; sha256="11z6v2i7jl647wxi9p5z66yvfnnqv6s7fxqmz7w2gkb6j8wl1f24"; depends=[]; }; R_oo = derive2 { name="R.oo"; version="1.21.0"; sha256="0723gxjazgqq7v3lwnl7axw3brzcnizvhbd71ijkkv8mz31fwp34"; depends=[R_methodsS3]; }; - R_rsp = derive2 { name="R.rsp"; version="0.41.0"; sha256="01l430avj5ggmdsla2kiriix72g0dlzx9klniq321bs0za808v3c"; depends=[R_cache R_methodsS3 R_oo R_utils]; }; + R_rsp = derive2 { name="R.rsp"; version="0.42.0"; sha256="1zcq0hzi0j7fvj2rs796a1i120wbr0387vck17rrd644awwbsbm0"; depends=[digest R_cache R_methodsS3 R_oo R_utils]; }; R_utils = derive2 { name="R.utils"; version="2.6.0"; sha256="03j7hrs03kyj9qrjxyp5kqv4lpqqpk6xwbkzx6j15d8928yrjr2x"; depends=[R_methodsS3 R_oo]; }; R0 = derive2 { name="R0"; version="1.2-6"; sha256="1yvcgchxlj7hkgqkw6g8pxnracxkld1grgykkcr6wbhminbylqv8"; depends=[MASS]; }; R1magic = derive2 { name="R1magic"; version="0.3.2"; sha256="1xfldr5y7pfdi6qljjvckknsv2wi9rnzwmqxkpgnyc96md2fvwjr"; depends=[]; }; - R2BayesX = derive2 { name="R2BayesX"; version="1.1-0"; sha256="043hrznc16j6mkr3h9vjvi9yn6xn497xz5pjp53ks48pzz54jp9p"; depends=[BayesXsrc colorspace mgcv]; }; + R2BayesX = derive2 { name="R2BayesX"; version="1.1-1"; sha256="1ff8cscl839ykp7l34sscc8zqp516mh64igk7dfv9n02l40w8ypf"; depends=[BayesXsrc colorspace mgcv]; }; R2Cuba = derive2 { name="R2Cuba"; version="1.1-0"; sha256="1zmlsambajzxkc9dawlqb0png8s502hwblq0vyhqgc08yf29b43w"; depends=[]; }; R2DGC = derive2 { name="R2DGC"; version="1.0.3"; sha256="0f84fmpf3m2s2p6bllvjs8rgnhwjy54adblv02dq8gakwvb4j2aw"; depends=[]; }; + R2DT = derive2 { name="R2DT"; version="0.1"; sha256="0zydrdx6xdlacq6s01jwv4rv6ydmbwmiif40rilp8h76bim0kdbr"; depends=[data_table devFunc plyr]; }; R2G2 = derive2 { name="R2G2"; version="1.0-2"; sha256="05d5vybvsi4pyr099916nk1l8sqszs9gaj2vhsx1jxxks8981na7"; depends=[]; }; R2GUESS = derive2 { name="R2GUESS"; version="1.7"; sha256="07w54r5r9v7pa8aklmwbwdcc57j3a3b46b1a7mwmzcl11mcfwdph"; depends=[fields MCMCpack mixOmics mvtnorm snowfall]; }; R2HTML = derive2 { name="R2HTML"; version="2.3.2"; sha256="00kxny7hajs9r2kw63qk7d03ggdxx2j1g8vbrmzp806y8aczvik9"; depends=[]; }; @@ -2635,7 +2697,6 @@ in with self; { R4CouchDB = derive2 { name="R4CouchDB"; version="0.7.5"; sha256="1wd1yqbs8m4zqvdm6x7mrcyk5b5pr4azm3r49nrilg8fnr2bk9rz"; depends=[bitops RCurl RJSONIO]; }; R4dfp = derive2 { name="R4dfp"; version="0.2-4"; sha256="02crzjphlq4hi2crh9lh8l0acmc1rgb3wr1x8sn56cwhq4xzqzcb"; depends=[]; }; R6 = derive2 { name="R6"; version="2.2.2"; sha256="13xfdr19ca7ymisidsanm6w7hsk3qmy5l8c0mlz3nk48f7s5cxq8"; depends=[]; }; - R6Frame = derive2 { name="R6Frame"; version="0.1.0"; sha256="0ib0van2qk0p89qmii8naj1jx56i6j7srvydzm41pyq2xdg0bmga"; depends=[data_table lazyeval R6]; }; RAC = derive2 { name="RAC"; version="1.1.1"; sha256="0ybyjjpw8f4wbdhkhbnjg8wy82ibxsywyjrsi406l2knnkx0mvmg"; depends=[matrixStats plotrix rstudioapi]; }; RAD = derive2 { name="RAD"; version="0.3"; sha256="0nmgsaykxavq2bskq5x0jvsxzsf4w2gqc0z80a59376li4vs9lpj"; depends=[MASS mvtnorm]; }; RADami = derive2 { name="RADami"; version="1.1-2"; sha256="1k4g58r64i19j8wj3d202283bnwaxf19l7ckiz29dlw4zidx6mvz"; depends=[ape Biostrings geiger hierfstat IRanges phangorn]; }; @@ -2650,41 +2711,44 @@ in with self; { RAP = derive2 { name="RAP"; version="1.1"; sha256="18dclijs72p6gxawpg8hk7n512ah4by5jfg2jnrp8mz79ajmdgir"; depends=[]; }; RAPIDR = derive2 { name="RAPIDR"; version="0.1.1"; sha256="14cnw4jjs5anb55zlg1yj6qc9yr51rsamigq2q7h8ypj2ggnna1d"; depends=[Biostrings data_table GenomicAlignments GenomicRanges PropCIs Rsamtools]; }; RAPTOR = derive2 { name="RAPTOR"; version="1.0.0"; sha256="1i3p3qa56ghcwh69vv3gnxnw13cbd99ms654j2bqr7g9qb7nl8vj"; depends=[mgcv]; }; - RATest = derive2 { name="RATest"; version="0.1.1"; sha256="1mky2vpww263j7fvczxjb2l7ajgr8p0gznz9snhjlvglc70pgcxa"; depends=[ggplot2 gridExtra quantreg]; }; + RATest = derive2 { name="RATest"; version="0.1.2"; sha256="0cxb82kzmywgslf6hfjl6v015s64jh483bzxnhph420mcp3ysbfk"; depends=[ggplot2 gridExtra quantreg]; }; RAdwords = derive2 { name="RAdwords"; version="0.1.14"; sha256="18pnq248fy2i0an0r9liky2bqs0gdpjmw7b564hjpbkhin3fw669"; depends=[RCurl rjson]; }; RApiDatetime = derive2 { name="RApiDatetime"; version="0.0.3"; sha256="0g5sdq6sl7cvsj9fgqhcdxjkrfi53078r0mbzvf69cvz38y5x3sm"; depends=[]; }; RApiSerialize = derive2 { name="RApiSerialize"; version="0.1.0"; sha256="0gm2j8kh40imhncwwx1sx9kmraaxcxycvgwls53lcyy2ap344k9j"; depends=[]; }; RAppArmor = derive2 { name="RAppArmor"; version="2.0.2"; sha256="18zmqqh4rnbnaiwi60jfp4xi8fp63ydr3jk9w4ijmy6s4hkpp75g"; depends=[]; }; RArcInfo = derive2 { name="RArcInfo"; version="0.4-12"; sha256="1j1c27g2gmnxwslff4l0zivi48qxvpshmi7s9wd21cf5id0y4za4"; depends=[RColorBrewer]; }; RAtmosphere = derive2 { name="RAtmosphere"; version="1.1"; sha256="0mk43bq28hlrjwaycsxca458k8xf00q58czgc17d8yx3kz17a5i0"; depends=[]; }; - RBMRB = derive2 { name="RBMRB"; version="2.1.0"; sha256="09zhx06m7513w4srxkv0bmskm21m33zd28mscgzgma4ifbyxr55h"; depends=[data_table ggplot2 httr plotly rjson]; }; + RBMRB = derive2 { name="RBMRB"; version="2.1.2"; sha256="1m6n2kfg83mlfy22k75hy5zjf547v0rdwk9w6l04yfyrr6himbr8"; depends=[data_table ggplot2 httr plotly rjson]; }; RBPcurve = derive2 { name="RBPcurve"; version="1.2"; sha256="0zkfvnhm780vid4qqdrx9mnc6jxxrmrnq47pqvk35rm3m4l96782"; depends=[BBmisc checkmate mlr shape TeachingDemos]; }; - RBesT = derive2 { name="RBesT"; version="1.2-3"; sha256="1d6m3r8amcw9rvivzgxgvsqjxq3xq78z2s29f20r6dxfl7wl7d99"; depends=[assertthat bayesplot BH checkmate dplyr Formula ggplot2 lme4 mvtnorm Rcpp RcppEigen rstan StanHeaders]; }; + RBesT = derive2 { name="RBesT"; version="1.3-3"; sha256="0pink9jza2pfm1vqmzgp0pcyg9a4ak4c9igcxj692np82mv8hi0j"; depends=[assertthat bayesplot BH checkmate dplyr Formula ggplot2 lme4 mvtnorm Rcpp RcppEigen rstan StanHeaders]; }; RCA = derive2 { name="RCA"; version="2.0"; sha256="0pidb5czrf0dc3ywy6cwm5akgsc62pvf94kfyxibzmd1favykx1h"; depends=[gplots igraph]; }; RCALI = derive2 { name="RCALI"; version="0.2-18"; sha256="1d9pgkkghkzciawlzlggqk6qp9bh0akwgh1hc47akcnjvqlvxjd2"; depends=[splancs]; }; RCEIM = derive2 { name="RCEIM"; version="0.3"; sha256="1kil5r88b6lf8vxmswz0wn0hhjxjm8jmlcl5kxjwl6fwjyy2z120"; depends=[]; }; RCMIP5 = derive2 { name="RCMIP5"; version="1.2.0"; sha256="0bwp1ln0y48g2d0bj9b47y0rlwffzv0pi6gjfzv4sg5anhswc9x7"; depends=[abind assertthat digest dplyr Matrix]; }; RCPmod = derive2 { name="RCPmod"; version="2.186"; sha256="0qxk6236xq391czyr043wn8rfml70gkc0xa6vz24s768gxmdk46l"; depends=[fishMod glmnet gtools MASS]; }; + RCRnorm = derive2 { name="RCRnorm"; version="0.0.1"; sha256="0ac09d0rib4znyfilmq6555snd3bhwlysrqsdnh4qbpkdv3bhp61"; depends=[truncnorm]; }; RCassandra = derive2 { name="RCassandra"; version="0.1-3"; sha256="0xa241s81cyw6lfjb522f2mlyrd0gav9yz3z5jab9hpdpgg9ri38"; depends=[]; }; RChronoModel = derive2 { name="RChronoModel"; version="0.4"; sha256="0haqxwic160pnnm90bgchzxmsdwmi6m97i9xrh8js8bp2xn76l5f"; depends=[hdrcde]; }; RCircos = derive2 { name="RCircos"; version="1.2.0"; sha256="0jj4jj9qnj7pils99hzw9yx5bwi182q4afdsqh7w7d9kzhp6xl3z"; depends=[]; }; - RClickhouse = derive2 { name="RClickhouse"; version="0.3.0"; sha256="18d3nz83s15yv33vq6gwj4a5ys6n9c33c4virdx644hzzrq4i8fa"; depends=[DBI dbplyr dplyr Rcpp]; }; + RClickhouse = derive2 { name="RClickhouse"; version="0.4.0"; sha256="0lb0sgs2f78y2z5ip2wqml88vykrwkdhn3i36y9hyrm34ackis6h"; depends=[DBI dbplyr dplyr Rcpp yaml]; }; RClimMAWGEN = derive2 { name="RClimMAWGEN"; version="1.1"; sha256="0icy560llfd10mxlq0xmc6lbg6a030za9sygw1rpz8sk5j0lvb84"; depends=[climdex_pcic RMAWGEN]; }; RClone = derive2 { name="RClone"; version="1.0.2"; sha256="1kv02acj0mk5102wvmdnxnkb7qig3jb9amcs4k2r26fpa4hyfa7f"; depends=[]; }; RColorBrewer = derive2 { name="RColorBrewer"; version="1.1-2"; sha256="1pfcl8z1pnsssfaaz9dvdckyfnnc6rcq56dhislbf571hhg7isgk"; depends=[]; }; RConics = derive2 { name="RConics"; version="1.0"; sha256="1lwr7hi1102gm8fi9k5ra24s0rjmnkccihhqn3byckqx6y8kq7ds"; depends=[]; }; RCriteo = derive2 { name="RCriteo"; version="1.0.2"; sha256="1vyhnblw9zr5h6c25lf76p9vn95k8vr0hpq1sjkccdwl9yvsyhfy"; depends=[httr plyr RCurl XML]; }; - RCurl = derive2 { name="RCurl"; version="1.95-4.8"; sha256="1yrbm8sypizy18qxkl6534fk2gf2ijxhahw6qldk9v5v3cjl68p7"; depends=[bitops]; }; + RCrypto = derive2 { name="RCrypto"; version="0.1.0"; sha256="1lw7hq5ks36fixk0g3gcy4nw21ygwc14jq840hnhyds4glywfpvm"; depends=[dplyr httr jsonlite]; }; + RCurl = derive2 { name="RCurl"; version="1.95-4.10"; sha256="02pyh6kvsfbwgccf8v77aa3ky21kps1rpgaii20wmridrgqj90vg"; depends=[bitops]; }; RDIDQ = derive2 { name="RDIDQ"; version="1.0"; sha256="09gincmxv20srh4h82ld1ifwncaibic9b30i56zhy0w35353pxm2"; depends=[]; }; RDML = derive2 { name="RDML"; version="0.9-9"; sha256="0amlr7mxp7175a7rd3jw7lhyvp3lnr01y81l27sl148sfb85zar6"; depends=[checkmate data_table lubridate pipeR R6 readxl rlist stringr xml2]; }; - RDS = derive2 { name="RDS"; version="0.8-0"; sha256="1waqrnr3hlr1zyvs8qh14dmq8ax2nghnkvz6gs32dbvlirl7zmxk"; depends=[anytime ergm ggplot2 gridExtra Hmisc igraph isotone network reshape2 scales]; }; + RDS = derive2 { name="RDS"; version="0.8-1"; sha256="18xn0ci35xs2myzj8rny6pp08cn8ljl3l4fdgaqp05fphgb5fh8j"; depends=[anytime ergm ggplot2 gridExtra Hmisc igraph isotone network reshape2 scales]; }; RDSTK = derive2 { name="RDSTK"; version="1.1"; sha256="07vfhsyah8vpvgfxfnmp5py1pxf4vvfzy8jk7zp1x2gl6dz2g7hq"; depends=[plyr RCurl rjson]; }; RDStreeboot = derive2 { name="RDStreeboot"; version="1.0"; sha256="10ry8rna450j389cplvyvgwljxa8lli7licwdin64b1kyzy2cdn7"; depends=[]; }; RDataCanvas = derive2 { name="RDataCanvas"; version="0.1"; sha256="1aw19lmdphxwva5cs3f4fb8hllirzfkk48nqdgrarz32l11y5z5j"; depends=[jsonlite]; }; RDieHarder = derive2 { name="RDieHarder"; version="0.1.3"; sha256="0wls7b0qfbi6hsq9xdywi4mdhim5b6mrzhvyrm9dxp9z1k7imz6m"; depends=[]; }; + RDocumentation = derive2 { name="RDocumentation"; version="0.8.2"; sha256="0qdn3c5xbjyrhk56wfch50xpyyfd4f79hs0v00cqk9iwsnjlwmb5"; depends=[httr proto rjson]; }; RDota2 = derive2 { name="RDota2"; version="0.1.6"; sha256="0fjsgg4dmzw2xwrf8jxq0f2d7f78bf67bl3ms5qcjk9kskfnymag"; depends=[httr jsonlite]; }; REAT = derive2 { name="REAT"; version="1.3.2"; sha256="1vp103jwq6zf3w6bn3xvbh4zcgsdrwiycp23ab8mj42axk8pw5li"; depends=[]; }; - REBayes = derive2 { name="REBayes"; version="1.1"; sha256="07fjhv07kbqw696iq66rj29l68anq370cw01d3xaswbbz09sg346"; depends=[Matrix reliaR Rmosek]; }; + REBayes = derive2 { name="REBayes"; version="1.3"; sha256="0byd7587vddffplzp8kc2aakab61pck2r25rajxfn0rsvl5yvxyx"; depends=[Matrix reliaR Rmosek]; }; RECA = derive2 { name="RECA"; version="1.3"; sha256="1v9ff2inxwpq91pjl6g9bpl9nmlyryp030g6abydikkhkcq3n74b"; depends=[]; }; REDCapR = derive2 { name="REDCapR"; version="0.9.8"; sha256="14psw0sxlyig4nf968n997djwf80hgy5ia2g0bp8rdpn8lrj01g6"; depends=[data_table dplyr httr magrittr readr tibble tidyr]; }; REEMtree = derive2 { name="REEMtree"; version="0.90.3"; sha256="01sp36p12ky8vgsz6aik80w4abs70idr9sn4627lf94r92wwwsbc"; depends=[nlme rpart]; }; @@ -2696,11 +2760,11 @@ in with self; { RESS = derive2 { name="RESS"; version="1.3"; sha256="1vddmifp47ia0sk35rnjpvw6gr9ygygafqczq268h17i1qs6ar22"; depends=[]; }; REST = derive2 { name="REST"; version="1.0.1"; sha256="16v89z7p9qkg7bsypf9vkrnbmb2n7gw3fqnfzbyxwj496wzxdv1x"; depends=[Rcmdr]; }; REdaS = derive2 { name="REdaS"; version="0.9.3"; sha256="09mmcvzgsxvrcq7sq3pw81pxgb1493p8lx8p5hhz8i42vshza6pn"; depends=[]; }; + REddyProc = derive2 { name="REddyProc"; version="1.1.3"; sha256="1ixc3bdsqy1mavzpbgw9sxlbnkrmy7sbb7wizh5133gi4p2f2bdh"; depends=[dplyr logitnorm mlegp purrr Rcpp rlang tibble]; }; REndo = derive2 { name="REndo"; version="1.3"; sha256="02hk2azmhdbr28vf8fglljiccij0284ypjzkk9yh23rw7pnbdk4g"; depends=[AER corpcor data_table e1071 gmm lme4 lmtest Matrix mvtnorm optimx plyr sandwich]; }; RFGLS = derive2 { name="RFGLS"; version="1.1"; sha256="13ggxj74h5b2hfhjyc50ndxznkvlg18j80m78hkzwh25d3948fsk"; depends=[bdsmatrix Matrix]; }; RFLPtools = derive2 { name="RFLPtools"; version="1.6"; sha256="1hl2crg7jl266zac41xvx151h7kl52346wnlvd8hba64s4s4apay"; depends=[RColorBrewer]; }; - RFOC = derive2 { name="RFOC"; version="3.4-3"; sha256="04nm672pfrlqywhdpw0yrylwk3gqjfhxfdghf6af27ry6m3rjpcd"; depends=[GEOmap MASS RPMG RSEIS splancs]; }; - RFc = derive2 { name="RFc"; version="0.1-2"; sha256="0zqnx9hbwp6j4y4r6mndgm95px07if93mpdmp3ls5kh4pnj2n6ff"; depends=[httr jsonlite sp]; }; + RFOC = derive2 { name="RFOC"; version="3.4-6"; sha256="0cs5wmpvrlag9aisbfiwkvwcb3skv5z4sawl30krmsq49mzj7yhd"; depends=[GEOmap MASS RPMG RSEIS splancs]; }; RFgroove = derive2 { name="RFgroove"; version="1.1"; sha256="1ank7jvmn83w0xzylf7i0fjb60mbrzzydspksfzcy16rkl6f5dvb"; depends=[fda randomForest wmtsa]; }; RFinanceYJ = derive2 { name="RFinanceYJ"; version="0.3.1"; sha256="0qhmzsch7c2p0zckjkspsajzh8m10cf75ixjlgd0nj8rm41fngm3"; depends=[XML xts]; }; RFinfer = derive2 { name="RFinfer"; version="0.2.0"; sha256="1cgdrg7gm8hdaaycipn8wjx7s4652jyy664n1my9qynmc56qib4n"; depends=[Matrix party pbapply randomForest]; }; @@ -2709,19 +2773,19 @@ in with self; { RFormatter = derive2 { name="RFormatter"; version="0.1.1"; sha256="0jmzdc2cl4vvffsyfwp493fiygh9xinhv970qxp1667rw8wlap8l"; depends=[formatR]; }; RFreak = derive2 { name="RFreak"; version="0.3-0"; sha256="1dmllxb6yjkfkn34f07j2g7w5m63b5d10lh9xsmxyfk23b8l3x0x"; depends=[rJava]; }; RGA = derive2 { name="RGA"; version="0.4.2"; sha256="0pjizgvrh0gbjlyxlb3v93nhigg8rpq3mziv1qlp6r0s5y7cmpi9"; depends=[httr jsonlite lubridate plyr]; }; - RGBM = derive2 { name="RGBM"; version="1.0-7"; sha256="1amyf43jmm1zh04kj7w98v4iim5zw8zq0p851xjb9lvdkwhvpdfy"; depends=[doParallel foreach plyr]; }; + RGBM = derive2 { name="RGBM"; version="1.0-8"; sha256="0xd64g07y808nzs4zvbx6bxdpbj2ndqg6yzc3p0l43pxm4hyxva0"; depends=[doParallel foreach plyr]; }; RGCCA = derive2 { name="RGCCA"; version="2.1.2"; sha256="0zcxakqnmih0243y5b6r9nmcfanzxd6q344pd5bca5pnm3y43wr0"; depends=[Deriv MASS]; }; RGENERATE = derive2 { name="RGENERATE"; version="1.3.5"; sha256="12dq04xpl06zhkzwqx3zy0bkpvb5phbdj2inxsyczf6d4dk209mb"; depends=[RMAWGEN]; }; RGENERATEPREC = derive2 { name="RGENERATEPREC"; version="1.2"; sha256="1w28yfzk3ilbz1r9fsc76cigyrnzzhsfm3a81ff8g26za7cb8vjp"; depends=[blockmatrix copula Matrix RGENERATE RMAWGEN stringr]; }; + RGF = derive2 { name="RGF"; version="1.0.0"; sha256="12x6nc7hvq16sg63b09xl2vxjd9cffxdl811ly2pmpr3i123h7fq"; depends=[Matrix R6 reticulate]; }; RGIFT = derive2 { name="RGIFT"; version="0.1-5"; sha256="1745fs4bq0ss39fiwljspvrmnkgbbpc1fjvhvcrsmp2iizq12sgn"; depends=[]; }; RGenetics = derive2 { name="RGenetics"; version="0.1"; sha256="0x5sspd67hh08qm62whlnnd838m0np29q3bfzgwp6j85lhil3jrx"; depends=[]; }; RGeode = derive2 { name="RGeode"; version="0.1.0"; sha256="1g8ha6zg4pvi8qimiihsa6rjfdcyj0q526l44jajjbqczmwg59lv"; depends=[MASS Rcpp]; }; RGoogleAnalytics = derive2 { name="RGoogleAnalytics"; version="0.1.1"; sha256="1049fyxl00izw92rm508p90asjp0agmv38b00yfbmasfzsp1r00s"; depends=[httr lubridate]; }; RGoogleAnalyticsPremium = derive2 { name="RGoogleAnalyticsPremium"; version="0.1.1"; sha256="0d22pdd5kvnrspikfb66ny07pgx96rvykr0zi78rwn6g1symdb4q"; depends=[httr jsonlite lubridate]; }; RGoogleFit = derive2 { name="RGoogleFit"; version="0.3.1"; sha256="0g4r5vb9zv6mqym1mh028ic9hkmlpklrhq4ks5sys7y60ps893k1"; depends=[bit64 httr jsonlite RCurl]; }; - RGraphM = derive2 { name="RGraphM"; version="0.1.11"; sha256="0fj1ww4q3gl707id2qv4c2aw9cdbnhxxi6x6a72r3d0bbb0yl8l9"; depends=[Rcpp RcppGSL]; }; RGraphics = derive2 { name="RGraphics"; version="2.0-14"; sha256="0bv95g17pvpq3nji0akphdaznh9k85hf5z78qypxwfqr76brxd05"; depends=[ggplot2 lattice]; }; - RGtk2 = derive2 { name="RGtk2"; version="2.20.33"; sha256="0d5r0lrkk1ixhln94pm6d5d88bqs0h8p2sdczb7r7ah007ffmhic"; depends=[]; }; + RGtk2 = derive2 { name="RGtk2"; version="2.20.34"; sha256="1yhdcd7f987bdd2y08dcx95i1hbfakgd8v1c606jxwr2dclyhx70"; depends=[]; }; RGtk2Extras = derive2 { name="RGtk2Extras"; version="0.6.1"; sha256="19gjz2bk9dix06wrmlnq02yj1ly8pzhvr0riz9b08vbzlsv9gnk2"; depends=[RGtk2]; }; RH2 = derive2 { name="RH2"; version="0.2.3"; sha256="1qbxy600fc8k2xl70liggdgg03ga6a8yad001banqzdmh508wcxl"; depends=[chron rJava RJDBC]; }; RHMS = derive2 { name="RHMS"; version="1.3"; sha256="0pp67p8i6nsh9nvxsd1m453735s0whlril8l640m888zl6a3463j"; depends=[Hmisc pso]; }; @@ -2730,21 +2794,20 @@ in with self; { RHT = derive2 { name="RHT"; version="1.0"; sha256="1gxf8nhj3y92h8al7l3fxa45wc568kb3cykrbdjlsy2zjacf7fcc"; depends=[]; }; RHawkes = derive2 { name="RHawkes"; version="0.0"; sha256="0qi32f6im6fsgvjs8bravc5z21557zn2d0a7i88dy0rri7czm5p7"; depends=[IHSEP]; }; RI2by2 = derive2 { name="RI2by2"; version="1.3"; sha256="0smc0fb9anq5ih9zx2slfbqyx02njm0hc7g22gpfggskmxf2l509"; depends=[gtools Rcpp]; }; - RIA = derive2 { name="RIA"; version="1.2.0"; sha256="0fyp1rz8xwq8jvp208yp4kx6v7jxcnj8dm923ii9jciy25q4i20i"; depends=[oro_dicom]; }; + RIA = derive2 { name="RIA"; version="1.3.0"; sha256="0wz2c770faravsmlp3ivbw136x82l1i14ilikrdn7cn49bz0r5mh"; depends=[oro_dicom]; }; RIFS = derive2 { name="RIFS"; version="0.1-5"; sha256="0705dhirh7bhy2yf3b1mpk3m7lggg4pwy640lvaspwaxkd6zac5w"; depends=[]; }; RISmed = derive2 { name="RISmed"; version="2.1.7"; sha256="08dmkkxsmwp9b4h2g1bbx03cijn793fsnzkmbima8x9d42vxnm1l"; depends=[]; }; RImageJROI = derive2 { name="RImageJROI"; version="0.1.1"; sha256="0a4sa60klbpl31qxxvjjbksdhvs3vwm9na1v7014v93fzxy6bjas"; depends=[spatstat]; }; RImagePalette = derive2 { name="RImagePalette"; version="0.1.1"; sha256="054w8xzsn330qg7piq6ajhji9na2swkkdis2567cy3q099npfl5v"; depends=[ggplot2]; }; - RImpala = derive2 { name="RImpala"; version="0.1.6"; sha256="03f4cq4bcrydpy78ypir7smj7abrcfynz0zzlgwgc60vh7vl79lz"; depends=[rJava]; }; - RInSp = derive2 { name="RInSp"; version="1.2"; sha256="0zg46qw44wx17ydcz592gl4k9qq08dycmsshxxqkjf92r3g3l6wm"; depends=[]; }; + RInSp = derive2 { name="RInSp"; version="1.2.3"; sha256="1nm29q2gysway4r7rdjr08m0w8lh2m9akhjh7swgjwrg4f15kfmy"; depends=[]; }; RInside = derive2 { name="RInside"; version="0.2.14"; sha256="1ks9hs78s2vgdp9nfpzwifkqnh3vnaqwand51yh9r1zyjc4k9rcd"; depends=[Rcpp]; }; RItools = derive2 { name="RItools"; version="0.1-15"; sha256="0f7g0w8bnbxryll48rnn7blgskgcdqqx9xv4fqmwcbkbasjz37va"; depends=[abind SparseM survival svd xtable]; }; - RJDBC = derive2 { name="RJDBC"; version="0.2-5"; sha256="0cdqil9g4w5mfpwq85pdq4vpd662nmw4hr7qkq6510gk4l375ab2"; depends=[DBI rJava]; }; - RJSDMX = derive2 { name="RJSDMX"; version="1.7"; sha256="13qd1ynxyyxsz11aiiqv47wlbygs5z3vsyw53fbcrcq4r34y4zx4"; depends=[rJava zoo]; }; + RJDBC = derive2 { name="RJDBC"; version="0.2-7"; sha256="0db2s3qkkv16a4xskym8q3lv5s5jscwd5hh1pgl9bndb91wm9qj7"; depends=[DBI rJava]; }; + RJSDMX = derive2 { name="RJSDMX"; version="1.9-3"; sha256="0myjhimx1p8ndyk60qgaw6csq58s4rxr67hgx9a5i1swsmlkwciz"; depends=[rJava zoo]; }; RJSONIO = derive2 { name="RJSONIO"; version="1.3-0"; sha256="1dwgyiy19sixhy6yclqcaaxswbmpq7digyjjxhy1qv0wfsvk94qi"; depends=[]; }; RJSplot = derive2 { name="RJSplot"; version="2.5"; sha256="0p2zqbq29pfjl703wqqjzgmif7yfzz7l8rzarjf5axkdy7w7fcyl"; depends=[]; }; RJaCGH = derive2 { name="RJaCGH"; version="2.0.4"; sha256="1a8nd0w73dvxpamzi2addwr6q3rxhnnpa1girnlwbd1j1dll0bz6"; depends=[]; }; - RJafroc = derive2 { name="RJafroc"; version="0.1.1"; sha256="1630f8nmpid5pax8gqxych8bqf8a1avgrk7yqisk3lf1yx3h68rq"; depends=[ggplot2 shiny stringr xlsx]; }; + RJafroc = derive2 { name="RJafroc"; version="1.0.1"; sha256="16a8j4bw754ci8mxfhh3c3y5g53f2hr1l1mh05xw31asqcxzafrm"; depends=[bbmle binom caTools ggplot2 mvtnorm numDeriv Rcpp stringr xlsx]; }; RKEA = derive2 { name="RKEA"; version="0.0-6"; sha256="1dncplg83b4zznh1zh90wr8jv5259cy93imrry86c5kqdijmhrrp"; depends=[rJava RKEAjars tm]; }; RKEAjars = derive2 { name="RKEAjars"; version="5.0-3"; sha256="0sm7dkdprmqh319jc43ra7qbk4qq0b2kdj9zs9mjcjz58gcrkl7s"; depends=[rJava]; }; RKEEL = derive2 { name="RKEEL"; version="1.1.22"; sha256="1k0xdy23za38lmav7hh9zchy9x61nkdm34s3cqrclzhf4nnlndfi"; depends=[arules doParallel foreach gdata Matrix pmml R6 rJava RKEELdata RKEELjars XML]; }; @@ -2768,24 +2831,24 @@ in with self; { RMThreshold = derive2 { name="RMThreshold"; version="1.1"; sha256="0wkc42vcggib002ad6ch43h6avpdgl12szrrrfd2p0wl72cwn5n1"; depends=[Matrix png]; }; RMTstat = derive2 { name="RMTstat"; version="0.3"; sha256="1nn25q4kmh9kj975sxkrpa97vh5irqrlqhwsfinbck6h6ia4rsw1"; depends=[]; }; RMallow = derive2 { name="RMallow"; version="1.0"; sha256="0prd5fc98mlxnwjhscmghw62jhq9rj5jk8qf4fnaa2a718yxf9b5"; depends=[combinat]; }; - RMariaDB = derive2 { name="RMariaDB"; version="1.0-2"; sha256="1dgzj9awdd7jjfq3vygyjx5w7380jnq9b306b1cd89fp1w1dy05l"; depends=[BH bit64 DBI hms plogr Rcpp]; }; + RMariaDB = derive2 { name="RMariaDB"; version="1.0-4"; sha256="0xzy1af1w0cjym48zlgdsngksp8j90b0197v78s5jkm1vxmr0ada"; depends=[BH bit64 DBI hms plogr Rcpp]; }; RMark = derive2 { name="RMark"; version="2.2.4"; sha256="1vns8bl3fnk6hkwmm0wl2c6lgyv3vabsk07kkxrxrl1nzy11wj3a"; depends=[coda matrixcalc msm]; }; RMediation = derive2 { name="RMediation"; version="1.1.4"; sha256="19idqx0hwljbcfrpqwa81k7cxbd8kv77ji8yi4n4p7517jbkzma6"; depends=[e1071 lavaan MASS]; }; - RMixpanel = derive2 { name="RMixpanel"; version="0.6-2"; sha256="09z00ryyk3jx1s7p2d1rzvg84qhybv58d1n3cvjcmj07bv1h2dj1"; depends=[jsonlite RCurl uuid]; }; + RMixpanel = derive2 { name="RMixpanel"; version="0.6-3"; sha256="025fg36jwq44y5m7msmjql3m0avc0hl0iw49wap0fvmzy5qn24qq"; depends=[base64enc jsonlite RCurl uuid]; }; RMongo = derive2 { name="RMongo"; version="0.0.25"; sha256="1anybw64bcipwsjc880ywzj0mxkgcj6q0aszdad6zd4zlbm444pc"; depends=[rJava]; }; RMySQL = derive2 { name="RMySQL"; version="0.10.13"; sha256="1j0vr2l4s02cg2hzgr3pla96pjj4h85sxw28lidy58rg5awnsf82"; depends=[DBI]; }; - RNAseqNet = derive2 { name="RNAseqNet"; version="0.1.1"; sha256="145wp9wz2ir1ni36zrp53qzpdh4vz5j0f9h27w1vljrll6v0mwck"; depends=[ggplot2 glmnet hot_deck igraph PoiClaClu]; }; + RNAseqNet = derive2 { name="RNAseqNet"; version="0.1.2"; sha256="07wk0i8iz3cvkiqawxhm61g3nka8adw0zrrv60zx329gg49w0ycl"; depends=[ggplot2 glmnet hot_deck igraph PoiClaClu]; }; RNAsmc = derive2 { name="RNAsmc"; version="0.1.0"; sha256="02r8y43hrhjyhmim2yf7s4c46q8ys6b8qla9vwjqpmx5104v5v5g"; depends=[RRNA]; }; RNAstructureModuleMiner = derive2 { name="RNAstructureModuleMiner"; version="0.1.0"; sha256="026r1h4z1jdfww0ay9iixa77ax6b19pgp589bbn77xg1vwjjlbsk"; depends=[RRNA]; }; RNCBIEUtilsLibs = derive2 { name="RNCBIEUtilsLibs"; version="0.9"; sha256="1h1ywx8wxy6n2rbpmjbqw4c0djz29pbncisd0mlbshj1fw226jba"; depends=[rJava]; }; RNCEP = derive2 { name="RNCEP"; version="1.0.8"; sha256="0nkx33997c5rgc3ch5a2bb6rrw5xw1y71rliygw5k1ldi335rsm7"; depends=[abind fields fossil maps RColorBrewer sp tgp]; }; RND = derive2 { name="RND"; version="1.2"; sha256="1rl5apgw43c841z0lapi9z2jn979dvqh4x1qkqx1ad77zcq87c85"; depends=[]; }; RNHANES = derive2 { name="RNHANES"; version="1.1.0"; sha256="045ykpgxvc22blbp47ysbk6a6x4akjd39pjr114cr23s7f48g6h4"; depends=[dplyr foreign rvest survey xml2]; }; - RNOmni = derive2 { name="RNOmni"; version="0.1.4"; sha256="1jm88r9gvx16qh6y6cwlkha211bhb5yq5q6jvyfd9yhac865n9kd"; depends=[abind cowplot foreach ggplot2 microbenchmark mvtnorm RcppEigen reshape2]; }; + RNOmni = derive2 { name="RNOmni"; version="0.1.5"; sha256="1lahwala3j0rcxdq1aswngqp89d4za167nrmsbj1lqscd7bn6qkd"; depends=[abind foreach mvtnorm RcppEigen]; }; RNRCS = derive2 { name="RNRCS"; version="0.2.0"; sha256="1wg7ld6g94wby5lagf68h19qgx2mf0pc8rfvmnz4fac7xpdsg9s8"; depends=[ggplot2 magrittr rvest xml2]; }; RNaviCell = derive2 { name="RNaviCell"; version="0.2"; sha256="15k8hkagn5520fy7x672fy329s2v7l0x44s44f6v7ql9mmg4b635"; depends=[RCurl RJSONIO]; }; RNeXML = derive2 { name="RNeXML"; version="2.0.8"; sha256="0ikdv60nkhiv70x1crd21xd92iq2gshj6248m896v1l276513g5j"; depends=[ape dplyr httr lazyeval plyr reshape2 stringr taxize tidyr uuid XML]; }; - RNeo4j = derive2 { name="RNeo4j"; version="1.6.4"; sha256="197ykvcfw1160ir6m568a4ksszyv5vlis2r0aygi155iz04j0bwm"; depends=[httr jsonlite rstudioapi]; }; + RNentropy = derive2 { name="RNentropy"; version="1.1.2"; sha256="1xypz5whmjjqpg1zsd398v2y6adhh1js270355did397cmsgskk6"; depends=[]; }; RNetCDF = derive2 { name="RNetCDF"; version="1.9-1"; sha256="0idfskxb1k8x0zzl6b0kgskdxn7zr49gw9xcj870ah9zp93iwnkx"; depends=[]; }; RNetLogo = derive2 { name="RNetLogo"; version="1.0-4"; sha256="1z7jp454k197c0zbkn64zmf25wadkiznv3w2csgiz917cbx6xcn1"; depends=[igraph rJava]; }; RNewsflow = derive2 { name="RNewsflow"; version="1.0.1"; sha256="1vxzcsiapnq8101iq4w73m9k8cq2khgcsxak71x72n295r7qpsd6"; depends=[data_table igraph Matrix plyr scales slam tm wordcloud]; }; @@ -2801,8 +2864,8 @@ in with self; { RODBCDBI = derive2 { name="RODBCDBI"; version="0.1.1"; sha256="0jkcc1lm8drsx1pkfj5h6rlbr98cgpvbf9ndzdwr048f3s8gd26i"; depends=[DBI RODBC]; }; RODBCext = derive2 { name="RODBCext"; version="0.3.1"; sha256="06ky97k93bbrlxm4fg770mnz6yqp2zzgwmvzdqrpanfbg7qkfwwn"; depends=[RODBC]; }; RODM = derive2 { name="RODM"; version="1.1"; sha256="0cyi2y3lsw77gqxmawla5jlm4vnhsagh3ykdgb6izxslc4j2fszx"; depends=[RODBC]; }; - ROI = derive2 { name="ROI"; version="0.3-0"; sha256="1bnlxhpkk4zjrnfk65cpxxrnjbnigri60sijzsxf3dyndp6d9a2b"; depends=[registry slam]; }; - ROI_models_globalOptTests = derive2 { name="ROI.models.globalOptTests"; version="1.0"; sha256="1zyzdxxl5fryxmh0f7721m825vdsv1wykvb3vcrd49dvkjz2lhr9"; depends=[globalOptTests ROI]; }; + ROI = derive2 { name="ROI"; version="0.3-1"; sha256="00mi22z7gs77pixi4090l5wh67s2pfm45cf3bmy7p3c3nlim24fp"; depends=[registry slam]; }; + ROI_models_globalOptTests = derive2 { name="ROI.models.globalOptTests"; version="1.1"; sha256="0cr4iy4p590zsp47jqyrvhamc4xa9nkpnnddmwqbkgvzmzxf83ap"; depends=[globalOptTests ROI]; }; ROI_models_miplib = derive2 { name="ROI.models.miplib"; version="0.0-1"; sha256="1viqr0dqza9386m9xmfdm5riaczp4izf3bd2jk70cmdgypjj6mzg"; depends=[R_utils Rglpk ROI]; }; ROI_models_netlib = derive2 { name="ROI.models.netlib"; version="1.0"; sha256="13ai7zkd00a03vyzfy1sm64cx8328xzwz5v8yw0shkdz5rchaq2d"; depends=[ROI]; }; ROI_plugin_alabama = derive2 { name="ROI.plugin.alabama"; version="0.3-0"; sha256="0k012kv29hxw61iy1r06h70aiiqxrpmv62i4va80vmdfa2zr8zjg"; depends=[alabama ROI]; }; @@ -2812,7 +2875,7 @@ in with self; { ROI_plugin_ecos = derive2 { name="ROI.plugin.ecos"; version="0.3-0"; sha256="1b5lbnynzkfj9wys8v8ly6g0fijk9vs6kk4pzgfp6pladdq3y35v"; depends=[ECOSolveR Matrix ROI slam]; }; ROI_plugin_glpk = derive2 { name="ROI.plugin.glpk"; version="0.3-0"; sha256="1a1vag47lfhiqmplrbkp95k36angpi9nvh0jd4cgy5y2416w22hn"; depends=[Rglpk ROI]; }; ROI_plugin_ipop = derive2 { name="ROI.plugin.ipop"; version="0.2-5"; sha256="0xampxba8s9kigxv4xj6nb8a7a02w1aj4ansj99z8m7qg0bg2ivv"; depends=[kernlab ROI slam]; }; - ROI_plugin_lpsolve = derive2 { name="ROI.plugin.lpsolve"; version="0.3-0"; sha256="0j5iwxgip343pib6hd29s63wp6z6lkrq75ngaydyvfzlk8hr66v0"; depends=[lpSolveAPI ROI]; }; + ROI_plugin_lpsolve = derive2 { name="ROI.plugin.lpsolve"; version="0.3-1"; sha256="0i1skxk88s8cgxbr2hl5z8h88aqchrfs3206dfb92libw3yi1vas"; depends=[lpSolveAPI ROI]; }; ROI_plugin_msbinlp = derive2 { name="ROI.plugin.msbinlp"; version="0.3-0"; sha256="00zvjqq2sj7iaymc0lrf5lmqfbqilwh8llmq841lvsmbps45w41k"; depends=[ROI slam]; }; ROI_plugin_nloptr = derive2 { name="ROI.plugin.nloptr"; version="0.3-0"; sha256="0niq0q08033vcm59wflilii7lciqixcpf13a93hgdaypdca8lxcw"; depends=[nloptr ROI]; }; ROI_plugin_optimx = derive2 { name="ROI.plugin.optimx"; version="0.3-0"; sha256="0hwjgwmaclq6y5mfmykjrchpyb632qzwcvvs1nnanmrh3yhfmpg9"; depends=[optimx ROI]; }; @@ -2822,52 +2885,54 @@ in with self; { ROMIplot = derive2 { name="ROMIplot"; version="1.0"; sha256="1njbsvnz7wrsv9l1p70p1ygmckaibz5i6jmvb0sfalp5jdcgl85n"; depends=[MortalitySmooth RCurl]; }; ROSE = derive2 { name="ROSE"; version="0.0-3"; sha256="12b9grh3rgaa07blbnxy8nvy5gvpd45m43bfqb3m4k3d0655jpk2"; depends=[]; }; RObsDat = derive2 { name="RObsDat"; version="16.03"; sha256="06d4svg4crgscn3wyg1fi8v46wlhlrgdrbfiv8ak4a5k5z0gws94"; depends=[DBI e1071 sp spacetime vwr xts zoo]; }; + ROlogit = derive2 { name="ROlogit"; version="0.1.1"; sha256="1bmhq3vcrfxl7flr28x5yhk8akfv59c0xs10s73dchf1qqjfz5ld"; depends=[evd survival]; }; ROpenDota = derive2 { name="ROpenDota"; version="0.1.1"; sha256="0d9a8c008bgzcd1hqly2h010f25xgs2s430hk90yq7vvqr3lmxl7"; depends=[jsonlite RCurl]; }; ROpenFIGI = derive2 { name="ROpenFIGI"; version="0.2.8"; sha256="0fvd25vsqkgi3jv4s2lnfag5qksyzyb48d7rhfw6z8piz37n4xaj"; depends=[httr jsonlite]; }; ROpenWeatherMap = derive2 { name="ROpenWeatherMap"; version="1.1"; sha256="0h1yw93v06bx8svhghh1fsrf837qax9896klh64b06djpgg9ngb9"; depends=[httr jsonlite RCurl]; }; ROptEst = derive2 { name="ROptEst"; version="1.0.1"; sha256="0160xs3bmk1bdan7gkibc50qfzxlmi413grvs0bib74xlr0x2kgj"; depends=[distr distrEx distrMod RandVar RobAStBase startupmsg]; }; ROptEstOld = derive2 { name="ROptEstOld"; version="0.9.2"; sha256="0blf34xff9pjfy983xm7a27xqkh9173nk64ysas6f0g4h31gh8ax"; depends=[distr distrEx evd RandVar]; }; ROptRegTS = derive2 { name="ROptRegTS"; version="0.9.1"; sha256="1a8pbn63wh2w2n409yzbwvarvhphcn82rdqjh407ch3k3x6jz3r5"; depends=[distr distrEx RandVar ROptEstOld]; }; - ROptSpace = derive2 { name="ROptSpace"; version="0.1.1"; sha256="01n99hsph4p4hvh9wimh7p3g38ww1bcdh6v4rd1hj18964v166a2"; depends=[]; }; + ROptSpace = derive2 { name="ROptSpace"; version="0.1.2"; sha256="0g5v4kf5kkylc3agizv2r534dnbgkjap1x146hdgl4jx2ggddnfk"; depends=[Rdpack]; }; ROptimizely = derive2 { name="ROptimizely"; version="0.2.0"; sha256="059zfn6y687h989wryvpqwgnp9njrrr4ys0gf1ql4pw85b2c50dy"; depends=[httr jsonlite]; }; ROracle = derive2 { name="ROracle"; version="1.3-1"; sha256="07zqzwaq5iqkjcmns2ahl1l71xjlznialb3dbyl4lwsh3p3fhf2n"; depends=[DBI]; }; RPANDA = derive2 { name="RPANDA"; version="1.3"; sha256="0rah5l5nfjs65zxgsgsy3q3vaph6qkr7p41x3arfhjsyma96p0zn"; depends=[ape BioGeoBEARS cluster corpcor deSolve fpc igraph mvMORPH mvtnorm phytools picante pspline pvclust TESS]; }; RPCLR = derive2 { name="RPCLR"; version="1.0"; sha256="03kpyszsjb656lfwx2yszv0a9ygxs1x1dla6mpkhcnqw00684fab"; depends=[MASS survival]; }; RPEXE_RPEXT = derive2 { name="RPEXE.RPEXT"; version="0.0.1"; sha256="0m5ml8ywxrf66mjz6m3xp1lajd7wdq9g7xsaln8n7ykq7h5615fc"; depends=[]; }; RPEnsemble = derive2 { name="RPEnsemble"; version="0.4"; sha256="0y9g22swcz0m5jbzi87ahxw27fb3jlf3iwvxb73kkzixqlvksw9y"; depends=[class MASS]; }; - RPMG = derive2 { name="RPMG"; version="2.2-1"; sha256="03gqam7lp6ycrwm30gdwh2irqkcviwzk74ysyxff7b23ng4jkz1j"; depends=[]; }; + RPMG = derive2 { name="RPMG"; version="2.2-2"; sha256="1hyqhyn8g43cpdvh3iyrf12dbyafp6gv64hb53hr0h1094hrvz81"; depends=[]; }; RPMM = derive2 { name="RPMM"; version="1.25"; sha256="1j48dh434wfhfzka0l21w6f73qlwfm70r9gdddhn504i2d5m4jph"; depends=[cluster]; }; RPPairwiseDesign = derive2 { name="RPPairwiseDesign"; version="1.0"; sha256="0k2vh698rhs5a0b5vhyvrnnwqnagdzs591zx6hn9vbmm8rm4y1dm"; depends=[]; }; - RPPanalyzer = derive2 { name="RPPanalyzer"; version="1.4.4"; sha256="0gi3zknxgxxmxjmb238vd64yqg02fv4qdirn2xf5badlqzwv3r71"; depends=[Biobase gam ggplot2 gplots Hmisc lattice limma quantreg]; }; + RPPanalyzer = derive2 { name="RPPanalyzer"; version="1.4.5"; sha256="0cf4mb7mjp7x3k7083c8n8fjbvrmcgq359wh6pdyj817mgkanqzv"; depends=[Biobase gam ggplot2 gplots Hmisc lattice limma quantreg]; }; RPostgreSQL = derive2 { name="RPostgreSQL"; version="0.6-2"; sha256="1mdhw5821v2h7hpa53v10wz53k4i90r0vb6a3dia5gq8f9j1h088"; depends=[DBI]; }; + RPostgres = derive2 { name="RPostgres"; version="1.0-4"; sha256="0ymlz5av86xy434mr319p2sw7gl42dpj5vfi83wfiq1qri2vvx23"; depends=[BH bit64 blob DBI hms plogr Rcpp withr]; }; RPresto = derive2 { name="RPresto"; version="1.3.0"; sha256="01w832ia4c44nhir5rzw33qa8h7afmf04vkfdlg32jaqi1gv5861"; depends=[DBI httr jsonlite openssl Rcpp stringi]; }; RProtoBuf = derive2 { name="RProtoBuf"; version="0.4.11"; sha256="0q05hdlbgbjydi0x80kgfayfkisalvmb9wy1n6afcw66pbikyb4l"; depends=[Rcpp RCurl]; }; RPtests = derive2 { name="RPtests"; version="0.1.4"; sha256="1r30pslbjq3dip41la81jlin2vhxdmayg902x9ryjy554awfgh7j"; depends=[glmnet randomForest Rcpp]; }; RPublica = derive2 { name="RPublica"; version="0.1.3"; sha256="1w2pn1g44a00ls8kkzj53a739pq6vzp38px2k0yh10rlzimmb21l"; depends=[curl httr jsonlite]; }; RPushbullet = derive2 { name="RPushbullet"; version="0.3.1"; sha256="15cb1zlfnjaf5z4dqx3xrkbkja152ah7jhs21qhvfl20qz4cyh7r"; depends=[curl jsonlite]; }; RQDA = derive2 { name="RQDA"; version="0.3-0"; sha256="0p060wilvmz5wyahbga6gxkhs49rw8nb093bfrha7vhqhxnmdyqk"; depends=[DBI gWidgets gWidgetsRGtk2 igraph RGtk2 RSQLite]; }; - RQGIS = derive2 { name="RQGIS"; version="1.0.2"; sha256="0q7qa9vk9vl6gig86cf5z8nypzxdlldgll2b9ircvnf15ii3wgz1"; depends=[raster RCurl readr reticulate rgdal sf sp stringr XML]; }; + RQGIS = derive2 { name="RQGIS"; version="1.0.3"; sha256="0wrzjfxwciirl838lakcw7f6qyqyykqd999c9krll5krqzyq7c3c"; depends=[raster RCurl readr reticulate rgdal sf sp stringr XML]; }; RQuantLib = derive2 { name="RQuantLib"; version="0.4.4"; sha256="1pki0c265nmgph9dbz2pyrq8h7295mxswavfdwsr7m1lpbpzk8s5"; depends=[Rcpp zoo]; }; RRF = derive2 { name="RRF"; version="1.7"; sha256="1nxwqb0ybia8cglqlrbwnm9xzab6ayrn5f3j3l0kqszq1rvkfw95"; depends=[]; }; RRNA = derive2 { name="RRNA"; version="1.0"; sha256="14rcqh95ygybci8hb8ays8ikb22g3850s9f3sgx3r4f0ky52dcba"; depends=[]; }; + RRPP = derive2 { name="RRPP"; version="0.1.0"; sha256="1c29zgfhhssg7m1ckn45bdk1jcqxs4q68bf4rq3jg8h1805jql1h"; depends=[]; }; RRTCS = derive2 { name="RRTCS"; version="0.0.3"; sha256="1riz1gjx3c0pf17xwybizb94nm5zgmfsnv6np3afvw831mb1x3l9"; depends=[sampling samplingVarEst]; }; RRate = derive2 { name="RRate"; version="1.0"; sha256="1q3f2gphdf50aijnk5xqfpxcqfd4jq7byb1gpb0vcnaxgi3a9lwm"; depends=[]; }; RRedshiftSQL = derive2 { name="RRedshiftSQL"; version="0.1.2"; sha256="03jbml8d19hcg6achnyc4hcnl5j10yvsx59j80r46zyn0flsnizq"; depends=[DBI RPostgreSQL]; }; - RRreg = derive2 { name="RRreg"; version="0.6.2"; sha256="0cm1r34hqdil3d27670q6a5iixh3lg8r4rzam6mq4zf2fqiwdpb9"; depends=[doParallel foreach lme4]; }; + RRreg = derive2 { name="RRreg"; version="0.6.5"; sha256="1hn69zqcafiq1fb38fl4gah90kim8pc2m35sbi1cgkgcbzz1vg16"; depends=[doParallel foreach lme4]; }; RSA = derive2 { name="RSA"; version="0.9.11"; sha256="1hsjy755r78my6ib9s9da7mibcjxd5svh2kq0v7a466m60cyfrss"; depends=[aplpack ggplot2 lattice lavaan plyr RColorBrewer tkrplot]; }; RSADBE = derive2 { name="RSADBE"; version="1.0"; sha256="1nzpm88rrzavk0n8iflsx8r3s1xcry15n80zqdw6jijjycz10w1q"; depends=[]; }; RSAGA = derive2 { name="RSAGA"; version="0.94-5"; sha256="0lbvy1p6wcxnn70149wcpmfy2ijk6g37ka452dxm0w0zpg0zga1w"; depends=[gstat plyr shapefiles]; }; RSAP = derive2 { name="RSAP"; version="0.9"; sha256="1sxirfabhpmfm0yiiazc9h1db70hqwva2is1dql6sjfanpl8qanl"; depends=[reshape yaml]; }; - RSAgeo = derive2 { name="RSAgeo"; version="1.2"; sha256="1lgxcf5sd7aqk213s70mvi0kc4prm1w97m4wf3xjnvs7yc7mb5yz"; depends=[]; }; RSCABS = derive2 { name="RSCABS"; version="0.9.2"; sha256="13l4ql40ahm06yi5a9zys62h5452fchkkhlhqh9gzh3pbpyjawgc"; depends=[gWidgets gWidgetsRGtk2 R2HTML RGtk2]; }; - RSDA = derive2 { name="RSDA"; version="2.0.2"; sha256="17hymak1i9zkwdn9hv7diccs0vdbx16cwhaxyw89xsq3lwqfi2ap"; depends=[abind dplyr FactoMineR ggplot2 glmnet lazyeval nloptr pander princurve RJSONIO rlang scales scatterplot3d sqldf stringr tidyr XML xtable]; }; - RSEIS = derive2 { name="RSEIS"; version="3.7-4"; sha256="0yz1lgq79chvcz70a82pyiy7s9z0af22pcnbkw629plzrxlpfppx"; depends=[RPMG Rwave]; }; + RSDA = derive2 { name="RSDA"; version="2.0.3"; sha256="18rka6g93yksgnwgzy4planjvsmc4d5xzf4fxarv57v6frg37y98"; depends=[abind dplyr FactoMineR ggplot2 glmnet lazyeval nloptr pander princurve RColorBrewer RJSONIO rlang scales scatterplot3d sqldf stringr tidyr XML xtable]; }; + RSEIS = derive2 { name="RSEIS"; version="3.7-8"; sha256="0f065jkdz91gi6l8y5y4m95vwgjsagrxx6r5982jbafi7zyqxm7j"; depends=[RPMG Rwave]; }; RSGHB = derive2 { name="RSGHB"; version="1.1.2"; sha256="0b2v17p3a3sy8jc4vy0nq65sdkxyf0b8sf5f78yvdcn5knydah6c"; depends=[]; }; RSIP = derive2 { name="RSIP"; version="1.0.0"; sha256="1yddqbnz0av69l53y83m7rnznc42qz66fc3qrispzaajs7p9n8d7"; depends=[ncdf4 raster rasterVis rgdal sp]; }; RSKC = derive2 { name="RSKC"; version="2.4.2"; sha256="0r9gpwhzscb6rbba3dg13p78pvskahgvsd59biag0shyii3xvwpm"; depends=[flexclust]; }; RSMET = derive2 { name="RSMET"; version="1.2.9"; sha256="1da7kck5g0vcd1ly7xaa1i8d9b1qjf6kwf35sq5d71hfbgx2fb4k"; depends=[stringr]; }; - RSNNS = derive2 { name="RSNNS"; version="0.4-9"; sha256="08f2yyyc42jxqwyhvwakjkyillkc23chnk2b3bfzyxnb4pphbdfl"; depends=[Rcpp]; }; - RSNPset = derive2 { name="RSNPset"; version="0.5.2"; sha256="11w2r1gfnzhqa5pwgy8nfs9s6lmln3cwkxxkid8fdg4b3ndwfl46"; depends=[doRNG fastmatch foreach qvalue Rcpp RcppEigen]; }; + RSNNS = derive2 { name="RSNNS"; version="0.4-10"; sha256="1khsv1sy8jgsl9s5fypcg77lzj811xzrygwnq6ki9v375sk383gh"; depends=[Rcpp]; }; + RSNPset = derive2 { name="RSNPset"; version="0.5.3"; sha256="1llx6anwkl4as0hdyvmsrlg9z8mkn9p1qxgs6kqs39w87gyx0j36"; depends=[doRNG fastmatch foreach qvalue Rcpp RcppEigen]; }; RSPS = derive2 { name="RSPS"; version="1.0"; sha256="0ynxhgnxsf27qm8r5d9lyd59zksnc3kvx35hy25vff8j3bg7fqgi"; depends=[gridExtra lattice plyr]; }; RSQLServer = derive2 { name="RSQLServer"; version="0.3.0"; sha256="1p3qds1ni8dm7cb45n4z5ppn3vsjk8mmqlvw76d301qfp3ja5zll"; depends=[assertthat DBI dbplyr dplyr purrr rJava yaml]; }; RSQLite = derive2 { name="RSQLite"; version="2.0"; sha256="1xpg1i1jkzkzv44k512k90c2vvl960pl2d4a3spwcha6yclyc3vz"; depends=[BH bit64 blob DBI memoise pkgconfig plogr Rcpp]; }; @@ -2881,9 +2946,9 @@ in with self; { RSelenium = derive2 { name="RSelenium"; version="1.7.1"; sha256="04ghck76jh7w6kgzdszkzjwj9fhyngq13mf9iybavxph5wcy7xgq"; depends=[binman caTools httr openssl wdman XML]; }; RSentiment = derive2 { name="RSentiment"; version="2.2.1"; sha256="0djp530yzj5a6y5nqk98pdvsgy9apqcqvkz0yjqx6856d9wrycm0"; depends=[NLP openNLP plyr stringr]; }; RSiena = derive2 { name="RSiena"; version="1.2-3"; sha256="125qkh8j42zm8r4acxw20m6ylq6vksja3qz6zxyyvfd3l2vqb2gy"; depends=[lattice MASS Matrix]; }; - RSiteCatalyst = derive2 { name="RSiteCatalyst"; version="1.4.13"; sha256="03993xck4274r6sxkzxlzcvwviafdb3d7icfn6f0xin4cnj6ry4m"; depends=[base64enc digest httr jsonlite plyr stringr]; }; + RSiteCatalyst = derive2 { name="RSiteCatalyst"; version="1.4.14"; sha256="0h5s9vhihjlz44l61vm83zqavkglb6f304sb04n0vhzzl797l04c"; depends=[base64enc digest httr jsonlite plyr stringr]; }; RSmartlyIO = derive2 { name="RSmartlyIO"; version="0.1.2"; sha256="0phkk79ng4r54w3d4ajl505gs8svlzdf1g6q50lhraq2cbllbvgx"; depends=[RCurl]; }; - RSocrata = derive2 { name="RSocrata"; version="1.7.3-2"; sha256="17c5g8k5r60h6cgs2383fhi09lnm3kjm3pll4ma66ypjfbffzdpn"; depends=[httr jsonlite mime plyr]; }; + RSocrata = derive2 { name="RSocrata"; version="1.7.4-7"; sha256="1cblp0fq7836jkb8cps3l1f8gx25bsdclkjvmxmd4b79y4hapiy2"; depends=[httr jsonlite mime plyr]; }; RSpectra = derive2 { name="RSpectra"; version="0.12-0"; sha256="0aa33mhzj03gznpza5l5qj94s45imfhrgx52bsa8rq00f93fgaf0"; depends=[Matrix Rcpp RcppEigen]; }; RSpincalc = derive2 { name="RSpincalc"; version="1.0.2"; sha256="09fjwfz1bzpbca1bpzxj18ki8wh9mrr5h6k75sc97cyhlixqd37s"; depends=[]; }; RStata = derive2 { name="RStata"; version="1.1.1"; sha256="1wx6cz4567xkfplybmbwmw25snhlaxn48yi620cv6p5xqv458yp7"; depends=[foreign]; }; @@ -2896,25 +2961,25 @@ in with self; { RSwissMaps = derive2 { name="RSwissMaps"; version="0.1.0"; sha256="0p57pb3p6j0g4ngzikys9i4d02p4dc4k0s8k7r1wgdmdy2rak3k2"; depends=[downloader dplyr ggplot2]; }; RTConnect = derive2 { name="RTConnect"; version="0.1.4"; sha256="1000jmmqzyhl6vh1ii75jdh88s9inaz52gvfwcin2k2zr7bi91ba"; depends=[]; }; RTDE = derive2 { name="RTDE"; version="0.2-0"; sha256="1dj7dsj4256z9m70y2fpcgprxpqbgqxz0dqwn0jl80sj2325f66s"; depends=[]; }; - RTOMO = derive2 { name="RTOMO"; version="1.1-5"; sha256="0wnxmzad2q5cpnqmglqh92clsk2c8fngd3gzh8f91alpj6nz69jp"; depends=[GEOmap RPMG RSEIS splancs]; }; + RTOMO = derive2 { name="RTOMO"; version="1.1-6"; sha256="03jb96ahzgp662vj2v65giv8ss61vad5w26kvq8hg9q06z879jza"; depends=[GEOmap RPMG RSEIS splancs]; }; RTaxometrics = derive2 { name="RTaxometrics"; version="2.3"; sha256="02446y86g21i37ycavg0xc1ggxk0k93d38n71fis9fav06lywxx3"; depends=[]; }; RTextTools = derive2 { name="RTextTools"; version="1.4.2"; sha256="1j3zfywq8xgax51mbizxz704i3ys4vzp8hyi5kkjzq6g2lw7ywq2"; depends=[caTools e1071 glmnet ipred maxent nnet randomForest SparseM tau tm tree]; }; RTextureMetrics = derive2 { name="RTextureMetrics"; version="1.1"; sha256="0d0mvpmcpd62cvqlajrqp32lnvpflyf9bqvdzly2v8v1kb8274fc"; depends=[]; }; - RTransProb = derive2 { name="RTransProb"; version="0.1.0"; sha256="0q5fyf176pzjjdpyc5wpakpfnp48ckcpcparf6n99js2xgxc725g"; depends=[chron e1071 expm matrixStats nnet pracma zoo]; }; - RTriangle = derive2 { name="RTriangle"; version="1.6-0.9"; sha256="1khwr62qdmgzkqzxqgkcjvxl1w8lnabqm68x18d5rk0hq3rpi1wj"; depends=[]; }; + RTransProb = derive2 { name="RTransProb"; version="0.2.0"; sha256="0ka923kg52f7dv19z9vjb7m9ji12wk92kva41idryfignxpa2bkf"; depends=[chron e1071 expm MASS Matrix matrixStats nnet pracma Rcpp RcppArmadillo zoo]; }; + RTriangle = derive2 { name="RTriangle"; version="1.6-0.10"; sha256="07ya95gmv53i2argqwgad6wd4sslql2wl1rkvsmgsvmhsb4wp9hd"; depends=[]; }; RUnit = derive2 { name="RUnit"; version="0.4.31"; sha256="1jqr871jkll2xmk7wk5hv1z3a36hyn2ibgivw7bwk4b346940xlx"; depends=[]; }; - RVAideMemoire = derive2 { name="RVAideMemoire"; version="0.9-68"; sha256="1gxh6w3b83szagirci84iik1ah0cvyzy4l61pnxli3abbzakzxc8"; depends=[ade4 boot car cramer dunn_test FactoMineR lme4 MASS mixOmics multcompView nnet pls pspearman vegan]; }; + RVAideMemoire = derive2 { name="RVAideMemoire"; version="0.9-69"; sha256="1fcblvvpydczakvjsiz8ffcs8zid2ln6dbah0y9ha3xfzp2qcj4z"; depends=[ade4 boot car cramer dunn_test FactoMineR lme4 MASS mixOmics multcompView nnet pls pspearman vegan]; }; RVFam = derive2 { name="RVFam"; version="1.1"; sha256="0gw8rgq11zndnqmay6y3y5rmmljvwhxzm2pqa90vs5413dnchq92"; depends=[coxme kinship2 lme4 MASS Matrix survival]; }; RVPedigree = derive2 { name="RVPedigree"; version="0.0.3"; sha256="0v47bcdlcd0ydw4vffy1g9lj1azvyqwz4400nmlqshf9vqyhf9qq"; depends=[CompQuadForm doParallel foreach kinship2 ks Matrix snpStats]; }; RVideoPoker = derive2 { name="RVideoPoker"; version="0.3"; sha256="06s4dlw0pw8rcq5b31xxqdpdk396rf27mai2vpvmn585vbm1ib7a"; depends=[pixmap rpanel tkrplot]; }; RViennaCL = derive2 { name="RViennaCL"; version="1.7.1.7"; sha256="08mhn6732sb284y4garx0nvhad4r42pk39p3r82fad4c1c3rxkhg"; depends=[]; }; - RVowpalWabbit = derive2 { name="RVowpalWabbit"; version="0.0.9"; sha256="1xvjl2mfknrb3jrvxxdza4l21sh76n6w6r12makvjkr9q0nal408"; depends=[Rcpp]; }; + RVowpalWabbit = derive2 { name="RVowpalWabbit"; version="0.0.12"; sha256="1x3pq6cnkjashf49imrw76xkw9nzqgn9132l03l9v4vacgh0s47m"; depends=[Rcpp]; }; RVsharing = derive2 { name="RVsharing"; version="1.7.0"; sha256="1z1jwj6dzyib8sxpz4p4wpiizfhxz6sp62nnig779rhnv7wfkqqf"; depends=[kinship2]; }; RVtests = derive2 { name="RVtests"; version="1.2"; sha256="0k7w6ml981zvr5bix197qw4kaf7rz5jqnwqlxf7aryxbm39gk16c"; depends=[glmnet pls spls]; }; RWBP = derive2 { name="RWBP"; version="1.0"; sha256="104vr2cdk185hh4zn3vmqvb14p1q8ifk11wdgvk7fli1m1zxxwdd"; depends=[igraph lsa RANN SnowballC]; }; RWebLogo = derive2 { name="RWebLogo"; version="1.0.3"; sha256="1n65mlnr163ywjnyyngnigbj0wpgkr38c3nx8hw5r8mwjnf3d617"; depends=[findpython]; }; - RWeka = derive2 { name="RWeka"; version="0.4-36"; sha256="0xmbyv5gnlr1hprshiydsi9vfiqwa887ddxp10b74g9ca2317qv9"; depends=[rJava RWekajars]; }; - RWekajars = derive2 { name="RWekajars"; version="3.9.1-5"; sha256="0dxyj7j9w0678ay4xjs1jl18qmidgrzgcs471fffp1jb8fdv3b6h"; depends=[rJava]; }; + RWeka = derive2 { name="RWeka"; version="0.4-37"; sha256="1q0riy7w2ighyy7fh1hj3q4wa0vbbn6h7nisgkyzwkcxkfq3n2pw"; depends=[rJava RWekajars]; }; + RWekajars = derive2 { name="RWekajars"; version="3.9.2-1"; sha256="006n7m3qxnzvfhkzcr0nbwqdlhygzdhyp8x3534dx6075bm00v0f"; depends=[rJava]; }; RWiener = derive2 { name="RWiener"; version="1.3-1"; sha256="0w12xvc18l002m8q6ad3laa667xzqjbcfqf0vvcmicgw2j3bbq6h"; depends=[]; }; RWildbook = derive2 { name="RWildbook"; version="0.9.2"; sha256="1bzdj55v7g2vlffpdsxpl8gv4k1xxd3xl7h1whvq6q5x76lprw0g"; depends=[data_table jsonlite marked]; }; RXKCD = derive2 { name="RXKCD"; version="1.8-2"; sha256="081zrx293z4009p6fj2za0mkf04nikxmg3i45l667qvy7nmajqlc"; depends=[jpeg png RJSONIO]; }; @@ -2924,6 +2989,7 @@ in with self; { RYoudaoTranslate = derive2 { name="RYoudaoTranslate"; version="1.0"; sha256="1i3iyqh97vpn02bm66kkmw52ni29js30v18n2aw8pvr88jpdgxm4"; depends=[RCurl rjson]; }; RZabbix = derive2 { name="RZabbix"; version="0.1.0"; sha256="0c5803chpzvp7dk9pjfx5f0nqynb76ywakz04ah2nw07ypvcyjyr"; depends=[httr jsonlite]; }; RZigZag = derive2 { name="RZigZag"; version="0.1.4"; sha256="1p0p9imdv40vw59m95x00zv9a3knl4m4gwlrbd2v93yzdc1n2a26"; depends=[Rcpp RcppEigen]; }; + RaPKod = derive2 { name="RaPKod"; version="0.9"; sha256="1qxzi2lf431zd44bcd98ybhzydy1cz12g864l6r668jk91aqy1qg"; depends=[kernlab MASS proxy Rcpp RcppArmadillo]; }; RadOnc = derive2 { name="RadOnc"; version="1.1.4"; sha256="1ri6ybzhfdgbrbfcy12mmvv2ipg61az7vwp1dbjyzs8mgsc1cxb5"; depends=[geometry oro_dicom ptinpoly rgl]; }; RadTran = derive2 { name="RadTran"; version="1.0"; sha256="1sb8d4y3b37akbxhdavxrkp34zn3ip061b7gzy0ga57pyn76cvpn"; depends=[ReacTran rootSolve]; }; RadioSonde = derive2 { name="RadioSonde"; version="1.4"; sha256="1v9jdpynmb01m3syhas1s08xxlvjawhlvjkyhils2iggi4xw4hiq"; depends=[]; }; @@ -2931,7 +2997,7 @@ in with self; { Ramble = derive2 { name="Ramble"; version="0.1.1"; sha256="0225za85i5nvf8l89i5bz7nxsxykd3v9fp1wgihmncca6n8vhgpl"; depends=[]; }; Rambo = derive2 { name="Rambo"; version="1.1"; sha256="1yc04xsfkc54y19g5iwambgnlc49ixjjvfrafsgis2zh5w6rjwv8"; depends=[sna]; }; RandMeta = derive2 { name="RandMeta"; version="0.1.0"; sha256="0bh3rkdfmwqym47q8f90pw3mmx7q8jyp4rz16ggqrmk1b5bdyqjb"; depends=[]; }; - RandPro = derive2 { name="RandPro"; version="0.1.0"; sha256="10zb8xhcb54jscfnpz734c7kh43pgi3bb61yasi6rvlqd83g1zdn"; depends=[]; }; + RandPro = derive2 { name="RandPro"; version="0.2.0"; sha256="1bhbg6lvgr9h6rq3g3ljm2422ngjb18maj80l7f659ql88c8h6mj"; depends=[caret e1071]; }; RandVar = derive2 { name="RandVar"; version="1.0.1"; sha256="0vj0p46xmj4129m6r5zg85fnvb5kx1ardwwk55nqypkxd0v58a4j"; depends=[distr distrEx startupmsg]; }; RandomFields = derive2 { name="RandomFields"; version="3.1.50"; sha256="0j7852wvclglp820y2x5r19gsr6ciygbbpl5qvwj1khnlz1hfsid"; depends=[RandomFieldsUtils sp]; }; RandomFieldsUtils = derive2 { name="RandomFieldsUtils"; version="0.3.25"; sha256="0nxk7jhr61l9h76hf96f7ypakl4wip144c0gzr6rqsja6m75rjz3"; depends=[]; }; @@ -2945,19 +3011,19 @@ in with self; { RateDistortion = derive2 { name="RateDistortion"; version="1.01"; sha256="1micjlbir1v5ar51g1x7bgkqw9m8217qi82ii6ysgjkhwdvpm075"; depends=[]; }; RatingScaleReduction = derive2 { name="RatingScaleReduction"; version="1.2"; sha256="0bw2j2wx0l56wp0k6fg8dddphggz0fycjzjydsd55rkg4zq6gpf3"; depends=[ggplot2 pROC]; }; Rbent = derive2 { name="Rbent"; version="0.1.0"; sha256="0xkb57dhhfd3342rv0xwbhbhn4zp5fbfch84fbh0sickm09l9vrj"; depends=[Rfit]; }; + Rbgs = derive2 { name="Rbgs"; version="0.2"; sha256="1q0dnbcpgx7x9klr6z33z6g2p9p8mrmhnsqjy6qw15ch720rrgn3"; depends=[imager magrittr rJava]; }; Rbitcoin = derive2 { name="Rbitcoin"; version="0.9.2"; sha256="0ndq4kg1jq6h0jxwhpdp8sw1n5shg53lwa1x0bi7rifmy0gnh66f"; depends=[data_table digest RCurl RJSONIO]; }; - Rblpapi = derive2 { name="Rblpapi"; version="0.3.6"; sha256="1n25dyggqlvgqjfq30022i5ydpzmli2bcw08kaidgp23l7f90ghh"; depends=[BH Rcpp]; }; + Rblpapi = derive2 { name="Rblpapi"; version="0.3.8"; sha256="1d1b3rdp9zqz9x6xb7zmbs4yrz339qjvlhif7s8ifcz1zdpzzhal"; depends=[BH Rcpp]; }; Rborist = derive2 { name="Rborist"; version="0.1-8"; sha256="0zr8vfbv11ascng7n2zv5xbqv7h0r0bycwn8bqlq8q10y2lyxg70"; depends=[Rcpp RcppArmadillo]; }; Rcapture = derive2 { name="Rcapture"; version="1.4-2"; sha256="1nsxy5vpfv7fj03i6l5pgzjm0cldwqxxycnvqkfkshbryjcyl0ps"; depends=[]; }; RcellData = derive2 { name="RcellData"; version="1.3-2"; sha256="1zzkgpj2pc42xzz5pspyj981a04gjpna4br3lxna255366ijgz4l"; depends=[]; }; Rcereal = derive2 { name="Rcereal"; version="1.2.1"; sha256="0nl4p0wqpni16z62610sqcxsz1x6kannl2s1zakpmjkk80pyxlk6"; depends=[]; }; RcextTools = derive2 { name="RcextTools"; version="0.1.1"; sha256="1rrij4ryspff9mn1c3jlzjprnipak7nzlb488pk0ci0awaccp5ga"; depends=[data_table igraph sqldf visNetwork]; }; Rcgmin = derive2 { name="Rcgmin"; version="2013-2.21"; sha256="02igq7bdlxwa7ysfiyvqfhcvgm866lrp2z3060z5lmnp6afa0958"; depends=[numDeriv]; }; - RchivalTag = derive2 { name="RchivalTag"; version="0.0.5"; sha256="03zjw60kjgqfyaaic097fzi72l7sw6cg1236lj3awfqw9z6dfb56"; depends=[akima mapdata maps maptools ncdf4 oceanmap PBSmapping plyr raster rgeos sp]; }; Rchoice = derive2 { name="Rchoice"; version="0.3-1"; sha256="1mx50270vbhvng4vdcc6w94f3l890vjl41y07bqkv40n93fxvffw"; depends=[Formula maxLik msm plm plotrix]; }; Rclusterpp = derive2 { name="Rclusterpp"; version="0.2.3"; sha256="02s5gmmmd0l98wd1y884pjl3h289dyd9p9s7dh7yl2zaslqs2094"; depends=[Rcpp RcppEigen]; }; Rcmdr = derive2 { name="Rcmdr"; version="2.4-1"; sha256="1rm4vxc8bx2pnblprcxfnnmynig368xp4p4slhprnxvp8f61z9z9"; depends=[abind car effects RcmdrMisc relimp tcltk2]; }; - RcmdrMisc = derive2 { name="RcmdrMisc"; version="1.0-6"; sha256="1afz5j96m1cyiwnbwsndkqhbn986bdbznzd2z64cygnqhb04gs70"; depends=[abind car colorspace e1071 foreign haven Hmisc MASS nortest readstata13 readxl sandwich]; }; + RcmdrMisc = derive2 { name="RcmdrMisc"; version="1.0-7"; sha256="0s323wdqjbk15a9zsmhigixh06ayrwb7hgzscb9d2aq0ww6jgl2k"; depends=[abind car colorspace e1071 foreign haven Hmisc MASS nortest readstata13 readxl sandwich]; }; RcmdrPlugin_BCA = derive2 { name="RcmdrPlugin.BCA"; version="0.9-8"; sha256="0xkip7q9i57ghgz0rh0pl8nkl7bflf4w1g4zbyjdlcjypyf7lnr8"; depends=[BCA car flexclust foreign nnet Rcmdr RcmdrMisc rpart rpart_plot]; }; RcmdrPlugin_BiclustGUI = derive2 { name="RcmdrPlugin.BiclustGUI"; version="1.1.1"; sha256="1sdc8ibggz8wpn77g7hddyl7lg86dbyw8qax63p6cqx1pfhb4rra"; depends=[BcDiag BiBitR BicARE biclust fabia gplots iBBiG Rcmdr rqubic s4vd superbiclust viridis]; }; RcmdrPlugin_DoE = derive2 { name="RcmdrPlugin.DoE"; version="0.12-3"; sha256="1iifn71kjjgcp7dfz2pjq57mgbv4rrznrl3b3k9gdc2dva1z9zvc"; depends=[DoE_base DoE_wrapper FrF2 Rcmdr RcmdrMisc relimp]; }; @@ -2974,7 +3040,7 @@ in with self; { RcmdrPlugin_KMggplot2 = derive2 { name="RcmdrPlugin.KMggplot2"; version="0.2-4"; sha256="0lmsd76q31bg2j8jd5p0891wi8cxibpjqx0196177w3y9kgcj3s1"; depends=[ggplot2 ggthemes plyr Rcmdr RColorBrewer scales survival tcltk2]; }; RcmdrPlugin_MA = derive2 { name="RcmdrPlugin.MA"; version="0.0-2"; sha256="1zivlc0r2mkxpx23ba76njmb2wnnjijysvza4f24dg4l47d0sr2p"; depends=[MAd metafor Rcmdr]; }; RcmdrPlugin_MPAStats = derive2 { name="RcmdrPlugin.MPAStats"; version="1.2.1"; sha256="0c3mcr8bmmbpxsqm8zfy07cbyglnq5466nafbglfs5m0z836yz9i"; depends=[ordinal Rcmdr]; }; - RcmdrPlugin_NMBU = derive2 { name="RcmdrPlugin.NMBU"; version="1.8.7"; sha256="1pfv4ar3i9mkj6d4jv206dpwhbz5an1yd4g758pxsanliy5mi6cb"; depends=[MASS mixlm phia pls Rcmdr xtable]; }; + RcmdrPlugin_NMBU = derive2 { name="RcmdrPlugin.NMBU"; version="1.8.8"; sha256="1s7947zvrhjrc7vchvaajp2q7xdqfg5vsmg6r7ym416cqq39i5kd"; depends=[MASS mixlm phia pls Rcmdr xtable]; }; RcmdrPlugin_PcaRobust = derive2 { name="RcmdrPlugin.PcaRobust"; version="1.1.4"; sha256="17rq3sv8payazjjn5j37cgd6df5b62d2y8al3grw6hw5nfba7lvn"; depends=[Rcmdr robustbase rrcov tkrplot]; }; RcmdrPlugin_RMTCJags = derive2 { name="RcmdrPlugin.RMTCJags"; version="1.0-2"; sha256="04g5a1dpch54k5ckfkrg4vsap1nc3af1i0i559qigv3hy8n7pm80"; depends=[coda igraph Rcmdr rjags rmeta runjags]; }; RcmdrPlugin_ROC = derive2 { name="RcmdrPlugin.ROC"; version="1.0-18"; sha256="0alwsvwry4k65ps00zvdqky9rh663bbfaw15lhwydbgcpqdkn2n6"; depends=[pROC Rcmdr ResourceSelection ROCR]; }; @@ -3003,31 +3069,32 @@ in with self; { RcmdrPlugin_temis = derive2 { name="RcmdrPlugin.temis"; version="0.7.9"; sha256="0nacpipaimb1348rhv1rma85gnd38wsg741pz7xpvn347wnnc0wz"; depends=[ca lattice latticeExtra NLP R2HTML Rcmdr RColorBrewer slam stringi tcltk2 tm zoo]; }; Rcolombos = derive2 { name="Rcolombos"; version="2.0.2"; sha256="0l92icjqqm5fxafqwd09lnmv5x6kvjdg8cphlm37q86nslwr5rkk"; depends=[httr]; }; Rcplex = derive2 { name="Rcplex"; version="0.3-3"; sha256="0abmrqphrpdlc831hwbwx15z4vdgn385kxhnqlbb9v0sjmfyszsl"; depends=[slam]; }; - Rcpp = derive2 { name="Rcpp"; version="0.12.14"; sha256="0qvyxggddyg87lza45hjl0a2prabdyshkqzkz418vi777zygqa6s"; depends=[]; }; + Rcpp = derive2 { name="Rcpp"; version="0.12.15"; sha256="1pnv6sl4vdn69ygmgrb1b3gsigfdcfb56wnzikic93l8gkvdsvxv"; depends=[]; }; Rcpp11 = derive2 { name="Rcpp11"; version="3.1.2.0"; sha256="1x6n1z7kizagr5ymvbwqb7nyn3lca4d4m0ks33zhcn9gay6g0fac"; depends=[]; }; RcppAPT = derive2 { name="RcppAPT"; version="0.0.4"; sha256="0xbaamv3bg08ymbmiq6kwh86p17y6qzgydq02syig2a3ykp0042c"; depends=[Rcpp]; }; - RcppAlgos = derive2 { name="RcppAlgos"; version="0.2.0"; sha256="0dp25csgmify0vd7dipcbp628cshy7i0bx77irc54qri1xq9icvv"; depends=[Rcpp]; }; + RcppAlgos = derive2 { name="RcppAlgos"; version="0.2.5"; sha256="1fy8iwyd6z5q59v0c2xkw8nlccwpr0mn026p5iqii93d87pg8q1j"; depends=[Rcpp]; }; RcppAnnoy = derive2 { name="RcppAnnoy"; version="0.0.10"; sha256="08s86ak26zybawry6l6l30k1lakc71k2j58539h70dnrmsd15jna"; depends=[Rcpp]; }; - RcppArmadillo = derive2 { name="RcppArmadillo"; version="0.8.100.1.0"; sha256="19sghlkslz6llcrjk5pd8c6dsb338jsi4dnwrbbrjkfq6jdr5jlp"; depends=[Rcpp]; }; + RcppArmadillo = derive2 { name="RcppArmadillo"; version="0.8.300.1.0"; sha256="0p6cbnwxgzigf7n5qhqvxdr3nd3pq3c2qq6pskqz7avzf813fy83"; depends=[Rcpp]; }; RcppBDT = derive2 { name="RcppBDT"; version="0.2.3"; sha256="0gnj4gz754l80df7w3d5qn7a57z9kq494n00wp6f7vr8aqgq8wi1"; depends=[BH Rcpp]; }; RcppBlaze = derive2 { name="RcppBlaze"; version="0.2.2"; sha256="0hi7gh7xlmdcyzxsis8wl841d6czbcgb8qdg8y822am1mvc0wmb7"; depends=[BH Matrix Rcpp]; }; RcppCCTZ = derive2 { name="RcppCCTZ"; version="0.2.3"; sha256="0cb04filbr0mymcg891lc0dw2b3fnjmhn8z50xcilb3v72ccrvqg"; depends=[Rcpp]; }; - RcppCNPy = derive2 { name="RcppCNPy"; version="0.2.7"; sha256="10i9gjkq7grr7s24x62nji87zikabjx0pfrrp6jvm6nbmaxcb8yj"; depends=[Rcpp]; }; + RcppCNPy = derive2 { name="RcppCNPy"; version="0.2.8"; sha256="0fwz942pd1r7jcxwqjbagcai153kv7csflhg7agwhxyj49m97i82"; depends=[Rcpp]; }; RcppClassic = derive2 { name="RcppClassic"; version="0.9.9"; sha256="102gi1l6hxdkz50iy9xbpb57iy5j7flv78sdq36pn9zi8x4k8k95"; depends=[Rcpp]; }; RcppClassicExamples = derive2 { name="RcppClassicExamples"; version="0.1.1"; sha256="0shs12y3gj5p7gharjik48dqk0fy4k2jx7h22ppvgbs8z85qjrb8"; depends=[Rcpp RcppClassic]; }; RcppDE = derive2 { name="RcppDE"; version="0.1.5"; sha256="1zgz8h7d7jjml9hm164y9wrsgcb1fymp3ipxp235fmk44lbrwpcw"; depends=[Rcpp RcppArmadillo]; }; RcppDL = derive2 { name="RcppDL"; version="0.0.5"; sha256="1gii00bna6k9byaax7gsx42dv1jjnkrp4clbmdq59ybq3vkvw8z2"; depends=[Rcpp]; }; - RcppEigen = derive2 { name="RcppEigen"; version="0.3.3.3.1"; sha256="093g2wmqyk86693l0lzh2va8119w3k7rvw5q24p842jdfv5x5z8l"; depends=[Matrix Rcpp]; }; + RcppEigen = derive2 { name="RcppEigen"; version="0.3.3.4.0"; sha256="1m6ssq6lvi36ggf26y4hhq996583pxxdb978jnn1x6r9gdb0q0hi"; depends=[Matrix Rcpp]; }; RcppExamples = derive2 { name="RcppExamples"; version="0.1.8"; sha256="15iw2vx6ygb03siq743418whhqvfrxk2i4nqn7p9yg1m3jwafxna"; depends=[Rcpp]; }; RcppFaddeeva = derive2 { name="RcppFaddeeva"; version="0.1.0"; sha256="1rah18sdfmbcxy83i7vc9scrwyr34kn9xljkv9pa31js68gn2jrl"; depends=[knitr Rcpp]; }; RcppGSL = derive2 { name="RcppGSL"; version="0.3.3"; sha256="0ih6lcby6rx0pkzwnd4bxq40cxa3cw9nfrphhhm9q71ng5vj1vrr"; depends=[Rcpp]; }; RcppGetconf = derive2 { name="RcppGetconf"; version="0.0.2"; sha256="0z5sg2jlr465196ws2pqi7j7hfmd7j8xlqqj6841m635cg4q48ba"; depends=[Rcpp]; }; + RcppGreedySetCover = derive2 { name="RcppGreedySetCover"; version="0.1.0"; sha256="1v84i9gsmvpkmgd4niqnzp58nhrgn2j4rggsrnlh391ikdfrl51x"; depends=[BH data_table Rcpp]; }; RcppHMM = derive2 { name="RcppHMM"; version="1.2.2"; sha256="0scdzmns1yw2gbarblzd6cbvndlysz54ff17qijiz17ql5cyzly6"; depends=[Rcpp RcppArmadillo]; }; RcppHoney = derive2 { name="RcppHoney"; version="0.1.7"; sha256="1jnng6271i2a564y115mr2bq324xffcjpq0ysy8yar2cgljxgspr"; depends=[Rcpp]; }; RcppMLPACK = derive2 { name="RcppMLPACK"; version="1.0.10-6"; sha256="0vjx6azp3sny6nv5k1cs6vk61hmbllqw8mgvi7zn15p7ilmhsyyi"; depends=[BH Rcpp RcppArmadillo]; }; - RcppMsgPack = derive2 { name="RcppMsgPack"; version="0.2.0"; sha256="1q5r4sj3rqs5xdxsmpzcxzs3jyx36siawz6j4ghc37mjb04rrdrl"; depends=[BH Rcpp]; }; - RcppNumerical = derive2 { name="RcppNumerical"; version="0.3-1"; sha256="1b88iz0f13w148jrmd3qdkagycs7w3yr82y4zgn123kp17y7vvny"; depends=[Rcpp RcppEigen]; }; - RcppParallel = derive2 { name="RcppParallel"; version="4.3.20"; sha256="1hc325hj214s61694iy4j3ly5zkya25h92hki29n3562qiirpb0g"; depends=[BH]; }; + RcppMsgPack = derive2 { name="RcppMsgPack"; version="0.2.1"; sha256="0pd5jgv24yskxzp76c3i6lkpq9npdgw1i15dcf02v9h43q8n1s9s"; depends=[BH Rcpp]; }; + RcppNumerical = derive2 { name="RcppNumerical"; version="0.3-2"; sha256="0j0hvwsbidahk2zx3zk7fhc6m9cca27iq3ivx7vdvggz8iqzszrz"; depends=[Rcpp RcppEigen]; }; + RcppParallel = derive2 { name="RcppParallel"; version="4.3.20.2"; sha256="0g1fpdaaihxklc0pycbl3rsb94y79nm9pcc0xsvvqrq6ahi2433i"; depends=[BH]; }; RcppProgress = derive2 { name="RcppProgress"; version="0.4"; sha256="09ayw6d69i0lplmaj5md25p5hn1nmiyp6a4sh60v93nrrs1cq7iv"; depends=[devtools Rcpp]; }; RcppQuantuccia = derive2 { name="RcppQuantuccia"; version="0.0.2"; sha256="1si5njb8g4g6fjrkqbp3y6z23yxs901nq9kmiwwbqs8di6svc5q3"; depends=[BH Rcpp]; }; RcppRedis = derive2 { name="RcppRedis"; version="0.1.8"; sha256="05c4c65ayiqyzmkj2mrgwwflgjk54rf9nmb3rhickj16yy9b071q"; depends=[BH RApiSerialize Rcpp]; }; @@ -3037,20 +3104,19 @@ in with self; { RcppStreams = derive2 { name="RcppStreams"; version="0.1.1"; sha256="0sa0ndnfm89f8lh3ba6jf3gxaan1g97dhlzbmpkwqj22frgggqjw"; depends=[BH Rcpp]; }; RcppTN = derive2 { name="RcppTN"; version="0.2-2"; sha256="0m2wc5n1fzxv56s4gqqnygb24dbadgrpgjm4bs4hr6qazgjapymf"; depends=[Rcpp]; }; RcppTOML = derive2 { name="RcppTOML"; version="0.1.3"; sha256="0krw4104m8drgyf53aq22kl5q0abrd0y4j1fvrwsj1dkbkybas05"; depends=[Rcpp]; }; - RcppThread = derive2 { name="RcppThread"; version="0.1.2"; sha256="0n3g7mpwz0nx05yxm8f2g1j1zxp265k8svhli83q19d744ksjl75"; depends=[Rcpp]; }; + RcppThread = derive2 { name="RcppThread"; version="0.1.3"; sha256="1nnyamjap1kgganvgwj48nip8nd7h35hzj7yvd131jnpq31gvvjg"; depends=[Rcpp]; }; RcppXPtrUtils = derive2 { name="RcppXPtrUtils"; version="0.1.0"; sha256="0833j7hy7dpdxkj1m5cfyxzpp7j0n7mxjc5kx32mdn5s43iaf7yh"; depends=[Rcpp]; }; RcppXts = derive2 { name="RcppXts"; version="0.0.4"; sha256="143rhz97qh8sbr6p2fqzxz4cgigwprbqrizxpkjxyhq8347g8p4i"; depends=[Rcpp xts]; }; RcppZiggurat = derive2 { name="RcppZiggurat"; version="0.1.4"; sha256="16wdsm0zzn6q0h29a1w8yjn4zxvrirsws6h31k0ljgprsn3jjhz4"; depends=[Rcpp RcppGSL]; }; Rcrawler = derive2 { name="Rcrawler"; version="0.1.7-0"; sha256="0r8s3d4dby9vn0qc5lbhab4vh3yl5yifi7ipxafsgffdxislnsdw"; depends=[data_table doParallel foreach httr selectr xml2]; }; - Rcriticor = derive2 { name="Rcriticor"; version="1.1"; sha256="0imhzf55w3fvfhrpjppkaxndb56bmpqnkibkq9li9g9i7zda2q8w"; depends=[]; }; Rcsdp = derive2 { name="Rcsdp"; version="0.1.55"; sha256="1sskjf2vv5alnwirz676d8yphzk2a69wkghhkpxb8my1rjlfdgaw"; depends=[]; }; Rcssplot = derive2 { name="Rcssplot"; version="0.2.0.0"; sha256="0pv1yzpsc68bahfxh5h79xmh798a22nk6i88gj1s81sp7l5fbqlm"; depends=[]; }; Rd2md = derive2 { name="Rd2md"; version="0.0.2"; sha256="07j1nnsk5nyl8kvgvh9f684g6bhc01jiq1fcmq2pnpx57jdzfbpi"; depends=[knitr]; }; Rd2roxygen = derive2 { name="Rd2roxygen"; version="1.6.2"; sha256="1hkqy97mh68yzkh4bawjrgf1rlhkh3jz2ky84rg3wgz1mkvrrsx2"; depends=[formatR roxygen2]; }; Rdice = derive2 { name="Rdice"; version="1.0.0"; sha256="1xibvm690808p2g3jch7rh1825yrpgln2hjfclgxjwn822qvs4xr"; depends=[data_table]; }; - Rdimtools = derive2 { name="Rdimtools"; version="0.1.3"; sha256="0cy5slrnj4mckirfl259xxfp2ndzzl4w3myzckjz5mmylmflvqyb"; depends=[Rcpp RcppArmadillo Rcsdp Rdpack Rlinsolve RSpectra Rtsne]; }; + Rdimtools = derive2 { name="Rdimtools"; version="0.3.1"; sha256="1rqb6by2h3w07k9hvsk18xwkmw7d58gj58r4lk99yk0n91ix6l0p"; depends=[ADMM CVXR Matrix Rcpp RcppArmadillo Rcsdp Rdpack RSpectra Rtsne]; }; Rdistance = derive2 { name="Rdistance"; version="1.3.2"; sha256="1ajmr58lgc74727jiydfrh4j6ra7vq8hp8nm3l2s3g2mc8n1mqk5"; depends=[]; }; - Rdpack = derive2 { name="Rdpack"; version="0.4-22"; sha256="1snj6aam942m7chp3qnl0yyvc9spzxwn3fjlzg74pk02hxki5drj"; depends=[bibtex gbRd]; }; + Rdpack = derive2 { name="Rdpack"; version="0.5-5"; sha256="19rib96758r2zkq4wlys0gfj60zff34gv1wpb8d7pa34h81gpi9p"; depends=[bibtex gbRd]; }; Rdrools = derive2 { name="Rdrools"; version="1.0.2"; sha256="1xn46lp6kgj6bns5nwjx4s8a3iif1g38iwf58hsrbqjhyygqvdzv"; depends=[Rdroolsjars rJava]; }; Rdroolsjars = derive2 { name="Rdroolsjars"; version="1.0.1"; sha256="1l9bc1bwpj10irr973hzkhr04i1f3g998n8hcl2k2i9kgv1naqmz"; depends=[rJava]; }; Rdsdp = derive2 { name="Rdsdp"; version="1.0.4-2"; sha256="05bk6yqvhzvyfzga1dz34w68nlwl2dc8bvhh3ghd07a61fsnkg4x"; depends=[]; }; @@ -3058,7 +3124,7 @@ in with self; { Rdtq = derive2 { name="Rdtq"; version="0.1"; sha256="114pyf95nl132014ygn84xi41c2zf1ii2wfgd1acwnnmfzvdw24s"; depends=[Matrix Rcpp]; }; Rduino = derive2 { name="Rduino"; version="0.1"; sha256="0r1yy3a2n8a4niasfjn77gv130a062i802r7xhbg0abljv5m6ra5"; depends=[serial]; }; ReCiPa = derive2 { name="ReCiPa"; version="3.0"; sha256="019vlvgxnqqlwghxygfqggzp2b4x2pqzdrbhaa703zdhm58k0n1g"; depends=[]; }; - ReIns = derive2 { name="ReIns"; version="1.0.5"; sha256="1p6m3xkkhh2jj8h2lphwirk9zzbjv4gvag2bpypan8c6cic8rd9a"; depends=[doParallel foreach Rcpp survival]; }; + ReIns = derive2 { name="ReIns"; version="1.0.6"; sha256="1q2f3ggg534dlgrmb4bsv8ikph11qg29asw1fpkndd9a96kc8gbk"; depends=[doParallel foreach Rcpp survival]; }; ReacTran = derive2 { name="ReacTran"; version="1.4.3.1"; sha256="05c9jfvj134gy3by7m3r1fbar0m39vaydr7d2py9cakzs44fqfpj"; depends=[deSolve rootSolve shape]; }; RealVAMS = derive2 { name="RealVAMS"; version="0.4-0"; sha256="1byh7in3bpfgdwfxp15334h167bvrcfj0cdswqy3yd81l9g2ickn"; depends=[Matrix numDeriv Rcpp RcppArmadillo]; }; Rearrangement = derive2 { name="Rearrangement"; version="2.1"; sha256="0q253nj62rl65vjsq6503r80qa2j35wac8lv7ydp9w260p28z923"; depends=[quantreg]; }; @@ -3079,13 +3145,13 @@ in with self; { RelimpPCR = derive2 { name="RelimpPCR"; version="0.2.3"; sha256="0qxngmkfb7sqjcyydk1z0rc857sfikf10iamxbv2d207spaha5l0"; depends=[caret ggplot2 relaimpo reshape2 Rmisc]; }; Renext = derive2 { name="Renext"; version="3.1-0"; sha256="074djs4y71667aylpgh514pzijr90rgpzm4w5ayq9cgaqz22m3am"; depends=[evd numDeriv]; }; RenextGUI = derive2 { name="RenextGUI"; version="1.4-0"; sha256="0jfg4a85j06wxk8vq2q6j8md2kcss0s7k71218gfh9vybk7hl4h6"; depends=[gWidgets gWidgetstcltk R2HTML Renext]; }; - Reol = derive2 { name="Reol"; version="1.55"; sha256="0147x3fvafc47zd2chgv3b40k480pcjpji8vm1d741i1p6ml448p"; depends=[ape RCurl XML]; }; + Renvlp = derive2 { name="Renvlp"; version="2.5"; sha256="0zsvjqbbakbr5bcgwpbjl8ns7hqgkk9v8g9b9yx2mjbv8vg40pz2"; depends=[Rsolnp]; }; ReorderCluster = derive2 { name="ReorderCluster"; version="1.0"; sha256="0ss750frzvj0bm1w7zblmcsjpszhnbffwlkaw31sm003lbx9hy58"; depends=[gplots Rcpp]; }; RepeatABEL = derive2 { name="RepeatABEL"; version="1.1"; sha256="00bq9ls4d0kczdv752xasqbavb11bjfvpriggfc8dw3g3i7pizpg"; depends=[GenABEL hglm]; }; RepeatedHighDim = derive2 { name="RepeatedHighDim"; version="2.0.0"; sha256="1n9w4jb25pm0mmsahlfhkp9jmhgp5b21l1g85gm2wbxqkjsg7g0g"; depends=[MASS nlme]; }; Replicate = derive2 { name="Replicate"; version="1.0.1"; sha256="110pvissyv3dx1wpwpngcg18mpmpml49gcmdykip55s1d3ljf791"; depends=[metafor]; }; - ReporteRs = derive2 { name="ReporteRs"; version="0.8.8"; sha256="1pw3hy3g0nc6amga59sb1nnwqc9asdpn6lh2zfh87y8nazrf1hf0"; depends=[gdtools htmltools knitr png R_utils ReporteRsjars rJava rvg shiny xml2]; }; - ReporteRsjars = derive2 { name="ReporteRsjars"; version="0.0.2"; sha256="1abvgzxipg0cgiy26z14i99qydzqva6j2v7pnrxapysg7ml5cnjc"; depends=[rJava]; }; + ReporteRs = derive2 { name="ReporteRs"; version="0.8.9"; sha256="1wsqbn231xqs87dmcry13bdkvv09y17jfqkdnpigcsiivbh3zr3x"; depends=[gdtools htmltools knitr png R_utils ReporteRsjars rJava rvg shiny xml2]; }; + ReporteRsjars = derive2 { name="ReporteRsjars"; version="0.0.3"; sha256="0rn000xkkda08kfh1b1l01piw596j3rca8sv4r23q52indrm7vzs"; depends=[rJava]; }; ResistorArray = derive2 { name="ResistorArray"; version="1.0-28"; sha256="055zr4rybgrvg3wsgd9vhyjpvzdskrlss68r0g7rnj4yxkix0kxz"; depends=[]; }; ResourceSelection = derive2 { name="ResourceSelection"; version="0.3-2"; sha256="08b1aa3183k1y30dwabnd6x353mdp2sn5b908cpv84bs3fdzlrdp"; depends=[MASS Matrix pbapply]; }; RevEcoR = derive2 { name="RevEcoR"; version="0.99.3"; sha256="1nym263ynjdir5kxv35jnmki9mshlplq0sk3xnjd4ac6f1cfbfqj"; depends=[gtools igraph magrittr Matrix plyr purrr stringr XML]; }; @@ -3100,39 +3166,42 @@ in with self; { Rgnuplot = derive2 { name="Rgnuplot"; version="1.0.3"; sha256="0mwpq6ibfv014fgdfsh3wf8yy82nzva6cgb3zifn3k9lnr3h2fj7"; depends=[]; }; RgoogleMaps = derive2 { name="RgoogleMaps"; version="1.4.1"; sha256="0fsmlnhl4kw2j4972kfanzw9njhnzk695gsyw8g6yppsmz2clcaq"; depends=[png]; }; Rgretl = derive2 { name="Rgretl"; version="0.1.6"; sha256="0m835fh6am7b5bwfhisqmsi31cchlh4vy6n0kfac0lv657sz9rf7"; depends=[]; }; - Rhpc = derive2 { name="Rhpc"; version="0.15-244"; sha256="1y83sshzsmsnm1m341x0ymmyz87dc5cjkbnr0v975p292rjqz3pd"; depends=[]; }; - RhpcBLASctl = derive2 { name="RhpcBLASctl"; version="0.15-148"; sha256="1carylfz9gafradbdyg7fz2bypr7n72fbm8vhyiinmp0k4s5ipvc"; depends=[]; }; + Rhpc = derive2 { name="Rhpc"; version="0.18-12"; sha256="095mrr6g05y9g8h88k1nf19zmjvg8hnmf5b3r6krqs4cxhp2qls2"; depends=[]; }; + RhpcBLASctl = derive2 { name="RhpcBLASctl"; version="0.18-12"; sha256="14qypi76h73iv3xwbb860r4f7516jyb88j92lmkifw03x86lx2b3"; depends=[]; }; RidgeFusion = derive2 { name="RidgeFusion"; version="1.0-3"; sha256="10llmrsfpcqrkcbw7zj44kvfy7ywn9rk49n7zplilz8h94zzcmjv"; depends=[mvtnorm]; }; Ridit = derive2 { name="Ridit"; version="1.1"; sha256="02cni6hzf1bsns7vi8vklnhc0pfb5vwqhjnnfnjnnaxpzpsbvdfn"; depends=[]; }; - Rilostat = derive2 { name="Rilostat"; version="0.2"; sha256="1ziy0g2piz4z37gnl0xdi486ig6p9b39v0qyiwcbdn03srizbj3a"; depends=[data_table dplyr DT haven plyr RCurl readr stringr tibble xml2]; }; + Rilostat = derive2 { name="Rilostat"; version="0.2.1"; sha256="058qz5kn7p8wn3lvw92c11cqpkz9brgf1igmawfkb0lqvj366vyd"; depends=[data_table dplyr DT haven plyr RCurl readr stringr tibble xml2]; }; Rip46 = derive2 { name="Rip46"; version="1.0.2"; sha256="0wfp6fm5mgmjqjkn0c5hvjd95yn4zcv0s8xc5294qf5jqxp8b1w7"; depends=[Rcpp]; }; Risk = derive2 { name="Risk"; version="1.0"; sha256="1i42xcc699syj108mvgklwb30wkf9c9jrg5rmd2ypnqk9mnyg2fg"; depends=[]; }; RiskPortfolios = derive2 { name="RiskPortfolios"; version="2.1.1"; sha256="1kn0vb4nhm3bxlmk5y2nl5m7a7hdvz3nz0yp8rdigpl6b2dp79w1"; depends=[MASS nloptr quadprog]; }; Ritc = derive2 { name="Ritc"; version="1.0.2"; sha256="03smhxjhjfkc9pxhlgg54b6v2jznpmnws8373qpvn9a9ky5bcq2l"; depends=[minpack_lm]; }; + RiverBuilder = derive2 { name="RiverBuilder"; version="0.1.0"; sha256="0qs21qz1zc0wsykd7qhry93il6qz255mgxyxnrdmxf5989k5mvxi"; depends=[]; }; Rivivc = derive2 { name="Rivivc"; version="0.9"; sha256="0gl3040pp9nqm4g2ympnx80z64zfnn1hfsxka8ynd2cqhjn3b5i1"; depends=[signal]; }; Rjpstatdb = derive2 { name="Rjpstatdb"; version="0.1"; sha256="0iwgsp3mblp7bsx88wfpqn09y1xrkingfkm3z9jsi2bwrnrjc2iv"; depends=[RCurl XML]; }; RkMetrics = derive2 { name="RkMetrics"; version="1.3"; sha256="1k6vnr1r4h69iznib638z45gd0f8wc4g4h0ji9f0017883g77li1"; depends=[]; }; Rknots = derive2 { name="Rknots"; version="1.3.2"; sha256="1krhma8hy3l5lbm6d8rxjlj9jw1zrd16h4wy4p1clfa5vlhh3bwi"; depends=[bio3d rgl rSymPy]; }; Rlab = derive2 { name="Rlab"; version="2.15.1"; sha256="1pb0pj84i1s4ckdmcglqxa8brhjha4y4rfm9x0na15n7d9lzi9ag"; depends=[]; }; - Rlabkey = derive2 { name="Rlabkey"; version="2.1.136"; sha256="1lgjskpdqp7ycym0wdr17law20z35hl36yajygk5cj3grchhlbpx"; depends=[Rcpp RCurl rjson]; }; - Rlda = derive2 { name="Rlda"; version="0.2.2"; sha256="0wp2lgflpai3pqxkmbsadrdzlm27xafb129zzqm8nx70zwww611c"; depends=[coda doParallel foreach gtools Rcpp RcppArmadillo RcppProgress]; }; + Rlabkey = derive2 { name="Rlabkey"; version="2.2.0"; sha256="1gzywhbdkd4f392fasa91ral8wg7jr51b4n1kll7r8hvyjz7bmgy"; depends=[httr Rcpp rjson]; }; + Rlda = derive2 { name="Rlda"; version="0.2.3"; sha256="1p1a6zzxbzhsq74k5vc5w7gq1qpzxccbn2y3svdads0sgk037mmx"; depends=[coda doParallel foreach gtools Rcpp RcppArmadillo RcppProgress]; }; Rlibeemd = derive2 { name="Rlibeemd"; version="1.4.0"; sha256="0nnkblrgycvfwn0lb9j92f5wpln69kk54z4irwi35rrfl31f689m"; depends=[Rcpp]; }; Rlinkedin = derive2 { name="Rlinkedin"; version="0.2"; sha256="15sbiis1d0s466nqk1adjhflb01sb9kn25f4y6sagkdggvyz6b56"; depends=[httpuv httr XML]; }; - Rlinsolve = derive2 { name="Rlinsolve"; version="0.1.1"; sha256="0xp2p3l0lbvz691hq3hjjrfvqyyar189xjbwyhk1snn4s9asqfx8"; depends=[BH bigmemory Matrix Rcpp RcppArmadillo]; }; + Rlinsolve = derive2 { name="Rlinsolve"; version="0.2.0"; sha256="08ib0jjqicscn4mx5yv25q0x66iycx8jhazvjb47nqvn24mirprp"; depends=[BH bigmemory Matrix Rcpp RcppArmadillo Rdpack]; }; Rlof = derive2 { name="Rlof"; version="1.1.1"; sha256="1px6ax2mr2agbhv41akccrjdrvp8a9lmhymp0cn8fjrib0ig8vql"; depends=[doParallel foreach]; }; Rmalschains = derive2 { name="Rmalschains"; version="0.2-3"; sha256="1gh0f385s1nq12mk6a5l3nj1gd2mc6jzd66lisnxbcip25s4b8pb"; depends=[Rcpp]; }; - RmarineHeatWaves = derive2 { name="RmarineHeatWaves"; version="0.15.7"; sha256="0dmmvvz7cpn378mji9hfmzr5xz99s3z0sd5anmidb6qzppkcxhks"; depends=[dplyr ggplot2 lazyeval lubridate magrittr plyr raster tidyr zoo]; }; - RmecabKo = derive2 { name="RmecabKo"; version="0.1.6"; sha256="04sb7gxy3mrnd0cmfir34wvvs4h0x98hm0z7fa4jfg389zj0qj9h"; depends=[Rcpp]; }; + RmarineHeatWaves = derive2 { name="RmarineHeatWaves"; version="0.16.0"; sha256="1h3850p1gdnr10x5gwqc45gk0vxbmq9j15prlm0m99xgcmk2pmxc"; depends=[dplyr ggplot2 lazyeval lubridate plyr raster tibble tidyr zoo]; }; + RmecabKo = derive2 { name="RmecabKo"; version="0.1.6.2"; sha256="1i08wlfd14wmvwrsvjyhgzxkwzfp4jiwbzymw8m25pvyjxgi7jmy"; depends=[Rcpp stringr]; }; Rmisc = derive2 { name="Rmisc"; version="1.5"; sha256="1ijjhfy3v91fspid77rrkc5dkcb2lav37wc3f4k5lwrn24wzy5y8"; depends=[lattice plyr]; }; Rmixmod = derive2 { name="Rmixmod"; version="2.1.1"; sha256="1m5yab7wq343bzg8xszbrlif3cd4d1x7xcqh82czkxbfni1gz7j7"; depends=[Rcpp]; }; RmixmodCombi = derive2 { name="RmixmodCombi"; version="1.0"; sha256="0cwcyclq143938wby0aj265xyib6gbca1br3x09ijliaj3pjgdqi"; depends=[Rcpp Rmixmod]; }; Rmosek = derive2 { name="Rmosek"; version="1.2.5.1"; sha256="0zggv699s93i9g98qjs4ci2nprgfkzq45lpzgrbhldsxiflf27gz"; depends=[Matrix]; }; - Rmpfr = derive2 { name="Rmpfr"; version="0.6-1"; sha256="073f01wga1ccxxgspsprjqdmb84iiap13mqhl7b6qcz9al89jl5z"; depends=[gmp]; }; + Rmpfr = derive2 { name="Rmpfr"; version="0.7-0"; sha256="0jpj3nl76jd6vc2p1xwr8jl62q8ckwsdaxqnk9b20srkq63mfrig"; depends=[gmp]; }; Rmpi = derive2 { name="Rmpi"; version="0.6-6"; sha256="184skad8m4y4pzk8v98b7k7prqxm9mg1b2pfxbknyvzakq6aizv1"; depends=[]; }; RnavGraph = derive2 { name="RnavGraph"; version="0.1.8"; sha256="1fwzfy41gdr1aw1wg6dw04mxwwpp5s9x2inxyq3bc9s8bm1rlxih"; depends=[graph rgl scagnostics]; }; RnavGraphImageData = derive2 { name="RnavGraphImageData"; version="0.0.3"; sha256="1mrh0p2ckczw4xr1kfmcf0ri2h2fhp7fmf8sn2h1capmm12i1q8f"; depends=[]; }; - RndTexExams = derive2 { name="RndTexExams"; version="1.4"; sha256="18zmdfq234k4bjj5rz6zjlkiyndbj5v2irjfl3w66vz38lk8sf6v"; depends=[CopyDetect data_table stringi stringr]; }; - Rnightlights = derive2 { name="Rnightlights"; version="0.1.4"; sha256="0a4pj24558q249x4x5lj89sbh4qyg60kpkvrx3ncgi7a521x3cfk"; depends=[cleangeo data_table doParallel dplyr foreach gdalUtils lubridate R_utils raster readr reshape2 rgdal rgeos rvest rworldmap settings sp stringr xml2]; }; + RndTexExams = derive2 { name="RndTexExams"; version="1.4.1"; sha256="1gi96hfd7dkvmbvy6hj25g1l7nwk4yhxkdjx1l3ws3c2zpi27cvj"; depends=[CopyDetect data_table stringi stringr]; }; + Rnets = derive2 { name="Rnets"; version="0.9.8"; sha256="0lcgapspl7ndrf3gxkrsv1172f2sv2587zaa1q6b950zympcvcj3"; depends=[data_table glasso igraph]; }; + Rnightlights = derive2 { name="Rnightlights"; version="0.1.5"; sha256="162n1k8dxd8g5ymwj59v8fkiflqhl2ik9mk1g8rf46dk84h0zflb"; depends=[cleangeo data_table doSNOW dplyr ff ffbase foreach gdalUtils lubridate R_utils raster readr reshape2 rgdal rgeos rvest rworldmap settings snow sp stringr xml2]; }; + Rnumerai = derive2 { name="Rnumerai"; version="0.2"; sha256="03qjrpi3hdbn8ni0ga57s3fsd2207mm34vl3p3n6y4vn15vg1k4n"; depends=[httr lubridate]; }; RobAStBase = derive2 { name="RobAStBase"; version="1.0.1"; sha256="17vfi0ia3z3s6x7frjk1alcgb0h73gwxy2n11kfl0k8w2fxgk49l"; depends=[distr distrEx distrMod RandVar rrcov startupmsg]; }; RobAStRDA = derive2 { name="RobAStRDA"; version="1.0.2"; sha256="1lyp2y38jnwv8ggrv9pdzprpf2gs62w1mpzwcqcbrmy7fzjsym0b"; depends=[]; }; RobLox = derive2 { name="RobLox"; version="1.0"; sha256="0y193xai0mfwpm6zhxgy21h4yrlqrpvwx84bj4xnr8ql87wznh7q"; depends=[Biobase distr distrMod lattice RandVar RColorBrewer RobAStBase]; }; @@ -3142,7 +3211,7 @@ in with self; { RobRex = derive2 { name="RobRex"; version="0.9"; sha256="0ii539mjq462n1lbnyv3whl8b1agvhvlz31wwyz911gb40isl639"; depends=[ROptRegTS]; }; Robocoap = derive2 { name="Robocoap"; version="0.1-1"; sha256="0aj6iv85a1zfaknjhrzf6lnf0qn726dvnj4dywg9nii1kkqrkq2w"; depends=[data_table igraph markovchain tm]; }; RobustAFT = derive2 { name="RobustAFT"; version="1.4-1"; sha256="180gmlinrpnk4ghl1xickbjkdqr7vb6qzmy6701xpji5k8g9il60"; depends=[robustbase survival]; }; - RobustGaSP = derive2 { name="RobustGaSP"; version="0.5.3"; sha256="1kzi5mvz78gxwrg1z822pkqzmqwvw73x2gh2yfsaxcwy2d7nr2mx"; depends=[Rcpp RcppEigen]; }; + RobustGaSP = derive2 { name="RobustGaSP"; version="0.5.4"; sha256="1zq62vx5bq2wbdh9irmcfpbpr83qqr9m9icbpksxc8bp9zdsdzkq"; depends=[Rcpp RcppEigen]; }; RobustRankAggreg = derive2 { name="RobustRankAggreg"; version="1.1"; sha256="1pslqyr1lji1zvcrwyax4zg2s81p1jnhfldz8mdfhsp5y7v8iar3"; depends=[]; }; RockFab = derive2 { name="RockFab"; version="1.2"; sha256="1b5mhfll5vmqwl4pblmclyx9604vn07jyza02rm0jcsx915ms8sc"; depends=[EBImage rgl]; }; Rodam = derive2 { name="Rodam"; version="0.1.2"; sha256="0fxsjzillr2v3sxbph13q3wrly6dx6m8rm276qzfvx1md044z14y"; depends=[RCurl]; }; @@ -3158,11 +3227,12 @@ in with self; { Rphylopars = derive2 { name="Rphylopars"; version="0.2.9"; sha256="19y0j5vh82sa9jigylxhv0s0hgjyhx3xq4blvk55jhpj8v7iyiky"; depends=[ape doBy geiger MASS Matrix mvnmle phylolm phytools Rcpp RcppArmadillo]; }; Rpolyhedra = derive2 { name="Rpolyhedra"; version="0.1.0"; sha256="06i8pmvn7fl8likxzzqzkggqf7x20pwi10mcv4x46cacil80ir2z"; depends=[futile_logger R6 rgl stringr testthat]; }; Rpoppler = derive2 { name="Rpoppler"; version="0.1-0"; sha256="19nvv45ahp0c241p1xzlq0sq5qarqg66jw5f1anhqnfi2hi91hcm"; depends=[]; }; + Rprofet = derive2 { name="Rprofet"; version="1.1.0"; sha256="1aflqic2jfx9y6mxj155n0900xp20g1lliq8ad4nd4z2k0rfcpi2"; depends=[binr ClustOfVar ggplot2 gridExtra plyr sqldf]; }; Rquake = derive2 { name="Rquake"; version="2.4-0"; sha256="14s2mjq9qqxfvlwmq9126h67y5wr7irlc7945pgv1ab9hl1lgmz8"; depends=[GEOmap MBA minpack_lm rgl RPMG RSEIS]; }; Rramas = derive2 { name="Rramas"; version="0.1-5"; sha256="0wy0flzp68mikq4v9k5pv6hbzx0w9mpa74dwx79i3iiddn0ylby6"; depends=[diagram]; }; - Rraven = derive2 { name="Rraven"; version="1.0.0"; sha256="1rca59bk94697m68j99kmrd6dl33k3yg1qqk1vqhjjvfp7m7jrlc"; depends=[pbapply vegan warbleR]; }; - Rrdrand = derive2 { name="Rrdrand"; version="0.1-14"; sha256="18ry07pi9iwskbxcimvp91fgpvrlaf44z0hp7k90dnyaa8qpbwjx"; depends=[]; }; - Rsampletrees = derive2 { name="Rsampletrees"; version="1.0.1"; sha256="1npv854iasvnrx51vgpda356dqwg7lgnx0d1lm174a0423cj3kmh"; depends=[ape haplo_stats Rcpp]; }; + Rraven = derive2 { name="Rraven"; version="1.0.1"; sha256="14sq6zk6k8kgcr3blrpi3asqd0gjc17b8v5siaj8r25vj4q0qzfc"; depends=[dplyr kableExtra pbapply vegan warbleR]; }; + Rrdrand = derive2 { name="Rrdrand"; version="0.1-15"; sha256="1i7snj33p44v43bz57x1887ing8h02xrf86rv7q0qijj198qf7dr"; depends=[]; }; + Rsampletrees = derive2 { name="Rsampletrees"; version="1.0.2"; sha256="1wz3dp1myjkxzf9l5mfli3dfbkc2fwg70xx7m9cxa06vq0a4w5pv"; depends=[ape haplo_stats Rcpp]; }; Rsampling = derive2 { name="Rsampling"; version="0.1.1"; sha256="14rp3j7iaii4rc3jkbijmbgvlagxxqjkz3vvfwwpxix43rsi8zsk"; depends=[]; }; Rserve = derive2 { name="Rserve"; version="1.7-3"; sha256="09rha4p86vak7ss721mwp5bm5ig09xam8zlqv63n9wf36v3kdmpn"; depends=[]; }; RsimMosaic = derive2 { name="RsimMosaic"; version="1.0.3"; sha256="0jlzrs9xxlpazvq3iw8znk0bd00bzlry7bgxsxq7xl23akizj0ji"; depends=[fields jpeg RANN]; }; @@ -3175,18 +3245,18 @@ in with self; { Rtextrankr = derive2 { name="Rtextrankr"; version="1.0.0"; sha256="16dby3xsfcjyp35xdflmgnh7zkqygfbffvj4jqa565vj9ksnq5ir"; depends=[igraph KoNLP sets stringi]; }; Rtnmin = derive2 { name="Rtnmin"; version="2016-7.7"; sha256="0f8ii87v29v61b93hx2yxdppp3nvgnl5imp80sbb4bjsdg0mf989"; depends=[]; }; Rtsne = derive2 { name="Rtsne"; version="0.13"; sha256="17crbdi80q4g2pwp9v7j3bdaznk96qlrqx01zvj3wwqippizyfqw"; depends=[Rcpp]; }; - Rttf2pt1 = derive2 { name="Rttf2pt1"; version="1.3.4"; sha256="19wcjgcv871vzclgskvb7xywnzvvi9v5k0qhwxwwi3qc9yx2kpaq"; depends=[]; }; + Rttf2pt1 = derive2 { name="Rttf2pt1"; version="1.3.5"; sha256="1pra2xa1gbg2yijlb9pjnkg3vxs5z35mfk110i7dblai9l59xwq6"; depends=[]; }; Rtts = derive2 { name="Rtts"; version="0.3.3"; sha256="0jphdpnpbq0d48kzflilxlh6psk282hi1hz3rmnwnd0rx5iyg624"; depends=[RCurl]; }; - RtutoR = derive2 { name="RtutoR"; version="0.3"; sha256="0knqwk44di24x8w2pf794hk2raq7gcpl6cd6s9m0sr73rxh9sf11"; depends=[dplyr DT ggplot2 ggthemes plotly rmarkdown shiny shinyBS shinydashboard shinyjs]; }; + RtutoR = derive2 { name="RtutoR"; version="1.1"; sha256="132vyqkzjzwms9sbw6dmkqqk45si89r0xvy477xl98k14a2q4jlw"; depends=[colourpicker devtools dplyr DT FSelector ggplot2 ggthemes plotly ReporteRs rlang rmarkdown shiny shinyBS shinydashboard shinyjs tidyr]; }; Rtwalk = derive2 { name="Rtwalk"; version="1.8.0"; sha256="0zxf66lsfq8by40flv34xzd5yy0wa1ah9li1d0h7f0yh9nbwhxl5"; depends=[]; }; Ruchardet = derive2 { name="Ruchardet"; version="0.0-3"; sha256="0dgldi6fgp949c3455m9b4q6crqv530jph210xzph41vgw8a2q2v"; depends=[Rcpp]; }; Runiversal = derive2 { name="Runiversal"; version="1.0.2"; sha256="0667mspsjydmxi848c6wsf14gz72bmdj9b3lilma92b7fhqnv7ai"; depends=[]; }; Runuran = derive2 { name="Runuran"; version="0.24"; sha256="1528jzpg0m4gya63xjf7ya4x1c96anm6bpzjgsa1vq1a4dz9m4y9"; depends=[]; }; - RunuranGUI = derive2 { name="RunuranGUI"; version="0.1"; sha256="0wm91mzgd01qjinj94fr53m0gkxjvx7yjhmwbkrxsjn6mjklq72l"; depends=[cairoDevice gWidgets gWidgetsRGtk2 Runuran rvgtest]; }; + RunuranGUI = derive2 { name="RunuranGUI"; version="0.2"; sha256="0k3vgn027c2zbrk7pc2wcy2h6dn2djhdi70m8fi1qpz6vg7k8c7x"; depends=[cairoDevice gWidgets gWidgetsRGtk2 RGtk2 Runuran rvgtest]; }; Rvcg = derive2 { name="Rvcg"; version="0.17"; sha256="0ssmi8mqmq82qrw0hzrmfqpwnkxwdlfa6j049r4l3gn28cfqhg1j"; depends=[Rcpp RcppArmadillo RcppEigen]; }; Rvmmin = derive2 { name="Rvmmin"; version="2017-7.18"; sha256="14jzwqwi1zd8sg1vb18hgvbvsax38hdqjy540qqhn2xb4z8qx3hy"; depends=[optextras]; }; Rvoterdistance = derive2 { name="Rvoterdistance"; version="1.1"; sha256="16il36hkq1j6gyl5d8bx5khiiv6fy2m8vkhwiaaiqsliw2sspy4j"; depends=[Rcpp]; }; - Rwave = derive2 { name="Rwave"; version="2.4-5"; sha256="1q80759382yig5gmjd83qafavhbbh7bbbgil8qha91xfs27m45br"; depends=[]; }; + Rwave = derive2 { name="Rwave"; version="2.4-8"; sha256="1rmqwyj2r84sii0vfqhyhpi3n1n1zia2ca627fq9ksvwn110nrvh"; depends=[]; }; Rwinsteps = derive2 { name="Rwinsteps"; version="1.0-1"; sha256="0kzngkan9vydibnr3xm4pyz4v6kz0r4h19f0ngqpri07fkhdsxzd"; depends=[]; }; RxCEcolInf = derive2 { name="RxCEcolInf"; version="0.1-3"; sha256="04d6ffl4qs2vjbk0ibvyq17i2l26qnvxr72s6p3f8q4px33rh4kh"; depends=[lattice MASS MCMCpack mvtnorm]; }; RxODE = derive2 { name="RxODE"; version="0.6-1"; sha256="1dkz6kq9wq7q2xw2wdzii5682w9f7rmgq28g7pfh8ivimfg1q4bi"; depends=[brew digest dparser inline magrittr Matrix memoise R_utils Rcpp RcppArmadillo rex]; }; @@ -3208,12 +3278,13 @@ in with self; { SAMUR = derive2 { name="SAMUR"; version="0.6"; sha256="0iyv7ljjrgakgdmpylcxk3m3xbm2xwc6lbjvl7sk1pmxvpx3hhhc"; depends=[Matching]; }; SAMURAI = derive2 { name="SAMURAI"; version="1.2.1"; sha256="02fipbjcsbp2b2957x6183z20icv1yly2pd1747nyww9bmpa7ycm"; depends=[metafor]; }; SAPP = derive2 { name="SAPP"; version="1.0.7"; sha256="0rms9kq87dypdfs248m4393lgpfx37qah0n1s109pfnjh3k64pm3"; depends=[]; }; + SARP_compo = derive2 { name="SARP.compo"; version="0.0.3"; sha256="1fn2rrd89qhz3vnz58xmmdjda70k474iyh4v1cmjfdam74fax7kh"; depends=[car igraph]; }; SARP_moodle = derive2 { name="SARP.moodle"; version="0.3.8"; sha256="1hz5a2zjv8hrasjck981sqahq0l88b6ard1iwsfqznalva8zywbb"; depends=[]; }; SASPECT = derive2 { name="SASPECT"; version="0.1-1"; sha256="1d3yqxg76h9y485pl5mvlx6ls1076f80b320yvx4zxmqq9yxmaba"; depends=[]; }; SAScii = derive2 { name="SAScii"; version="1.0"; sha256="0nq859xmrvpbifk8q1kbx3svg61rqdg8p8gr1pn85fr0j3w7h666"; depends=[]; }; - SASmarkdown = derive2 { name="SASmarkdown"; version="0.3.3"; sha256="0wwqy9gr35isaqzgg48d2gaayaz40n8mjymlj28brbsbrfhddpbw"; depends=[knitr]; }; + SASmarkdown = derive2 { name="SASmarkdown"; version="0.4.3"; sha256="0jc21ylflvv4snik13731acxh9zw79s7hpswk58p2wzvavq8k9zn"; depends=[knitr]; }; SASmixed = derive2 { name="SASmixed"; version="1.0-4"; sha256="0491x4a3fwiy26whclrc19alcdxccn40ghpsgwjkn9sxi8vj5wvm"; depends=[]; }; - SASxport = derive2 { name="SASxport"; version="1.5.3"; sha256="0hkwz4szl4rzl6arkn6kp8s7nk55g902hpslgzbkaz94wlrzp77z"; depends=[chron Hmisc]; }; + SASxport = derive2 { name="SASxport"; version="1.5.7"; sha256="1y3hh77c69s65wnar3x40wj3msqjpvspdyy368hgfg8ljkdl3pk2"; depends=[Hmisc stringi]; }; SAVE = derive2 { name="SAVE"; version="1.0"; sha256="1m9rrga8x00hlvn0c1jcz6yz14pdm6h3dq14905mq49sw63c7zll"; depends=[coda DiceKriging]; }; SBRect = derive2 { name="SBRect"; version="0.26"; sha256="16g0ciy9q9irypsl8x36i0lavl41j3af13r2si0by8q6wj56pxi4"; depends=[rJava]; }; SBSA = derive2 { name="SBSA"; version="0.2.3"; sha256="1v23lzzziyjlvgn5p2n1qcq2zv9hsyz2w15lbnfi5wvinxhlg8sc"; depends=[Rcpp RcppArmadillo]; }; @@ -3233,8 +3304,10 @@ in with self; { SDD = derive2 { name="SDD"; version="1.2"; sha256="0wzgm1hgjv5s00bpd7j387qbvn5zvyrrd5fr2rgyll4cw9p4sd33"; depends=[Hmisc rgl rpanel sm tseries]; }; SDDE = derive2 { name="SDDE"; version="1.0.1"; sha256="14vql1bypn409w9xcx1jdzff6apiagcz2wng3y24h3mk7yjv9bzy"; depends=[doParallel foreach igraph iterators]; }; SDEFSR = derive2 { name="SDEFSR"; version="0.7.1.0"; sha256="1pknkda7iaq5247557b93kc3cf2ih7b3wpqpkqyfgfay3ci9kg16"; depends=[]; }; + SDLfilter = derive2 { name="SDLfilter"; version="1.0.0"; sha256="0g6cwpz1mzmcq16h34255sanqqwyb0a8dn6h043ksvnc91h2haa0"; depends=[data_table geosphere raster sp trip]; }; SDMPlay = derive2 { name="SDMPlay"; version="1.2"; sha256="0kafj5z1fi5d824h0n23qzn8a6n8fqm3bfc0pdfypzbaj2arjz3k"; depends=[dismo gbm raster SDMTools]; }; SDMTools = derive2 { name="SDMTools"; version="1.1-221"; sha256="1kacrpamshv7wz83yn45sfbw4m9c44xrrngzcklnwx8gcxx2knm6"; depends=[R_utils]; }; + SDT = derive2 { name="SDT"; version="1.0.0"; sha256="1jwpfd1pnzy9wcl90qv5bgwi19shsw9064dvml9zwbif8yw8dzjj"; depends=[quadprog]; }; SDaA = derive2 { name="SDaA"; version="0.1-3"; sha256="0z10ba4s9r850fjhnrirj2jgnfj931vwzi3kw9502r5k7941lsx0"; depends=[]; }; SDraw = derive2 { name="SDraw"; version="2.1.3"; sha256="179h5byh92dkycchalf875pwq1h4ryg3hba9fs7fbq4dshki5i7p"; depends=[deldir rgeos sp spsurvey]; }; SEAsic = derive2 { name="SEAsic"; version="0.1"; sha256="1mg01sag6n1qldjvmvbasac86s7sbhi4k99kdkav2hdh6n9jg467"; depends=[]; }; @@ -3263,7 +3336,8 @@ in with self; { SILGGM = derive2 { name="SILGGM"; version="1.0.0"; sha256="1lhmisgg2zbfksl7czz0fqag3732gkjc44n615ipxbdi2pvnc7m0"; depends=[glasso MASS Rcpp reshape]; }; SIMMS = derive2 { name="SIMMS"; version="1.1.1"; sha256="1wgqz8zgijv5psz5r5zj9k63ikq5sr1dxqxvh48n2041slj6jdap"; depends=[doParallel foreach glmnet MASS survival xtable]; }; SIN = derive2 { name="SIN"; version="0.6"; sha256="0vq80m3vl8spdnlkwvwy0gk3ziyybqzjp3scnfdcpn942ds7sgg9"; depends=[]; }; - SIS = derive2 { name="SIS"; version="0.8-4"; sha256="1bhpj0l28804f48nc68xg0cfbpzplr2n32ccfs4w9g2m7lgarg07"; depends=[glmnet ncvreg survival]; }; + SIRItoGTFS = derive2 { name="SIRItoGTFS"; version="0.2.2"; sha256="1vjpnhpf8b3fwxgmmp7nljmk8js7sn2sn9ajlsgpmnww1bq4sh5f"; depends=[data_table dplyr easycsv reshape2 rgdal rgeos sp]; }; + SIS = derive2 { name="SIS"; version="0.8-6"; sha256="1749ks5iqlj6lrn0hglifj1iy86dcpqz2pcnf1l798pa05rq8ngd"; depends=[glmnet ncvreg survival]; }; SISIR = derive2 { name="SISIR"; version="0.1"; sha256="08lw9y38j5qq00m2vcxsac97lg14j4w1y6607vw8isrb3qb5db9z"; depends=[doParallel expm foreach glmnet Matrix RSpectra]; }; SKAT = derive2 { name="SKAT"; version="1.3.2.1"; sha256="0ylfz63xiq2zw9nc8nqr89qbhl3fnkhjgg9x7yxjm78vrn640hkl"; depends=[]; }; SLC = derive2 { name="SLC"; version="0.3"; sha256="0l0y1sjj0glsb7vwla99ijclcgaq2y85bgz1wqm348n4shsmm2rs"; depends=[]; }; @@ -3278,7 +3352,7 @@ in with self; { SMIR = derive2 { name="SMIR"; version="0.02"; sha256="02q8m5m8lcfrpi78p3kajkps8wiir3jwyqc54j9vfx8aj6mk1v71"; depends=[]; }; SMLoutliers = derive2 { name="SMLoutliers"; version="0.1"; sha256="10frs7wcyn368m7fvw2f1cyd0xqr6sv5jziixnyvr8q5fadyl2p0"; depends=[]; }; SMM = derive2 { name="SMM"; version="1.0.1"; sha256="0g2blwcir0sxvqrivcyn9a8ssx34834lgcwrjwb6kcrq224dchws"; depends=[DiscreteWeibull seqinr]; }; - SMMA = derive2 { name="SMMA"; version="1.0.1"; sha256="0ld8jjh67iw5w5cmb2gb899269apjydgqjsnn5hq5lzqjilpzzl8"; depends=[Rcpp RcppArmadillo]; }; + SMMA = derive2 { name="SMMA"; version="1.0.2"; sha256="13psgrpljnaxpcq4amiyg5mqhpzmb2hyb7jzh3h8wyq18rvs3s4d"; depends=[Rcpp RcppArmadillo]; }; SMNCensReg = derive2 { name="SMNCensReg"; version="3.0"; sha256="06542jacy74mw6ic0i1ml09pn45sll96bya7dqja6bg9yp0m6bvr"; depends=[Matrix PerformanceAnalytics]; }; SMPracticals = derive2 { name="SMPracticals"; version="1.4-2"; sha256="0apmkmsv2fqmxpgq08n9k9dvcknj74s4cpp0myjcd6kibb7g9slq"; depends=[ellipse MASS nlme survival]; }; SMR = derive2 { name="SMR"; version="2.0.1"; sha256="0qy56fmismcjklpf29ic2gi1g8ajdjpxsl0akb9cqzyisyf641ia"; depends=[]; }; @@ -3286,7 +3360,7 @@ in with self; { SNFtool = derive2 { name="SNFtool"; version="2.2.1"; sha256="0id8qvkvxvnlqn3wha45v457pr4061j35wcwlqwh03n0j549s84l"; depends=[heatmap_plus]; }; SNPMClust = derive2 { name="SNPMClust"; version="1.3"; sha256="1gad1jfla4qpczh8vpwyss5cckzgpffsyj0d71r8drbspr4i3r90"; depends=[MASS mclust]; }; SNPassoc = derive2 { name="SNPassoc"; version="1.9-2"; sha256="113byj8zbg6xyxb1qzm76sqfyk3fap0sd90691zzm1x2pbfnb3mh"; depends=[haplo_stats mvtnorm survival]; }; - SNPknock = derive2 { name="SNPknock"; version="0.5"; sha256="1s3awnf6j8g7b689m4q1rl6jgpagdx29mymlybj6gp0h2xb16ylm"; depends=[Rcpp]; }; + SNPknock = derive2 { name="SNPknock"; version="0.5.1"; sha256="0vp6nsa2ydfn6m7fwsgjwdzhvrwzjyv79n1fa5910lj1f0g5ijw2"; depends=[Rcpp]; }; SNPmaxsel = derive2 { name="SNPmaxsel"; version="1.0-3"; sha256="0pjvixwqzjd3jwccc8yqq9c76afvbmfq0z1w0cwyj8bblrjpx13z"; depends=[combinat mvtnorm]; }; SNPtools = derive2 { name="SNPtools"; version="1.1"; sha256="0l29kiqz4048x7amxx1qzkaw2xnd6lpdsdp5nq3rck9amx2hw64a"; depends=[Biostrings GenomicRanges IRanges Rsamtools]; }; SNSequate = derive2 { name="SNSequate"; version="1.3.1"; sha256="1w6yai79996pgg98skfb63kha8rqjzn751nmxg961rc4id1g8ysn"; depends=[emdbook knitr magic plyr progress statmod]; }; @@ -3297,7 +3371,7 @@ in with self; { SOFIA = derive2 { name="SOFIA"; version="1.0"; sha256="1jlaggxa2nz2r5yb2xmf0dh5wmxfdk6xwn0l3nwsqh82vyxhp7l9"; depends=[png]; }; SOIL = derive2 { name="SOIL"; version="1.1"; sha256="0dvfh84xjzald51kmdb546par2rbjdn3nys9y9w7cvafv2lc5yj9"; depends=[brglm2 glmnet MASS ncvreg]; }; SOLOMON = derive2 { name="SOLOMON"; version="1.0-1"; sha256="0z91wsrgdir25ks4dnirzsg4f1ngal7n40235m3w43j6y6dhkqrc"; depends=[]; }; - SOMbrero = derive2 { name="SOMbrero"; version="1.2-2"; sha256="1y1shgzsl922id3r7yrc5715zg5l6pxmim969h3ba32ry6mr0sr8"; depends=[igraph knitr RColorBrewer scatterplot3d shiny wordcloud]; }; + SOMbrero = derive2 { name="SOMbrero"; version="1.2-3"; sha256="04vla01y3qagzpyr70mx9dgl0ihk9a9vh02896fr8kc9ch3sx6bd"; depends=[igraph RColorBrewer scatterplot3d shiny wordcloud]; }; SOPIE = derive2 { name="SOPIE"; version="1.5"; sha256="0isvb2vzzpn57bq0ix2pfaqdnl5z8qk6v6fvf15vnxcqg2sm63q5"; depends=[ADGofTest circular]; }; SOR = derive2 { name="SOR"; version="0.23.0"; sha256="0djmz57g23xpzv6p8i71f3zrsc6xdgqkbcvn5cbx9m78n31ipkm5"; depends=[Matrix]; }; SOUP = derive2 { name="SOUP"; version="1.1"; sha256="0k8nlvl4681cz07xjazprcc0jhknfa5hgr7w1qxxmgrp3sprr8r4"; depends=[tensor]; }; @@ -3308,6 +3382,7 @@ in with self; { SPAr = derive2 { name="SPAr"; version="0.1"; sha256="068jlsvaxx80ih6n86286m2r75cvy6w0m51vpj4gfclhh38py4p4"; depends=[]; }; SPAtest = derive2 { name="SPAtest"; version="2.0.2"; sha256="1h1qgjisd1kxw3644s5xmj212mnqkbfdzz9sa9wk4vb2dzv4660r"; depends=[]; }; SPCALDA = derive2 { name="SPCALDA"; version="1.0"; sha256="1bmp2zz0favmpyp0ap8a2r1mg1nlan7zg5cj75drdnfpqlsn5vgl"; depends=[MASS]; }; + SPCAvRP = derive2 { name="SPCAvRP"; version="0.2"; sha256="1kqx2mf75h491aj6rm923frpj1yl9c1p666cq3f1d7aa1k9byrzi"; depends=[MASS]; }; SPECIES = derive2 { name="SPECIES"; version="1.0"; sha256="0p45llf2wjr467bqr4pbljfank9zz3fm42yl3i0r3jbkxgz0rjf0"; depends=[]; }; SPEDInstabR = derive2 { name="SPEDInstabR"; version="1.5"; sha256="1m8als33k8db82pr9k8n4jk6i1dqimd9klw8xawwz7gzk1h31fsr"; depends=[]; }; SPEI = derive2 { name="SPEI"; version="1.7"; sha256="0lj7d3bbik7q4di5nqc3a1rn94z2y2v9x45r1jjkvgf03frj96qd"; depends=[ggplot2 lmomco]; }; @@ -3315,27 +3390,28 @@ in with self; { SPIGA = derive2 { name="SPIGA"; version="1.0.0"; sha256="0yd06x5rh1h1s4v9apj43c90rkz8m5kssbny7y5mnw5mr2acds9b"; depends=[GA]; }; SPIn = derive2 { name="SPIn"; version="1.1"; sha256="109xxrg7bsmmfd6ik85kxrw2qclxbh5ipsh5mmrdl4hki3hnyp2s"; depends=[quadprog]; }; SPODT = derive2 { name="SPODT"; version="0.9-1"; sha256="01yq429a4s63855bwpn2mqjj2k3cz4187kfpi7n7qqdpdvmxz109"; depends=[rgdal sp tree]; }; - SPOT = derive2 { name="SPOT"; version="2.0.1"; sha256="0zyh0pn0mc7n150851vdqx3ixjn53id3pm3a408365h0wafcrn3g"; depends=[MASS randomForest]; }; + SPOT = derive2 { name="SPOT"; version="2.0.2"; sha256="17apfbsh4qv3yhv7jpmmyz7whwx4ilm0krspxyc4knm3yxxw26bp"; depends=[DEoptim MASS nloptr randomForest rgenoud rsm]; }; SPPcomb = derive2 { name="SPPcomb"; version="0.1"; sha256="1kn3pi3c7g7waill1grm382ixbvnc7z8pbgzqd94hxqzgkivhid7"; depends=[nleqslv]; }; SPREDA = derive2 { name="SPREDA"; version="1.0"; sha256="1dyqsra899fd1nbk1b7vkw8gs455c6pbcvzw84q9iri77186xqhv"; depends=[nlme survival]; }; SPRT = derive2 { name="SPRT"; version="1.0"; sha256="1r4pfqh8k5avi8qgpk5x1cy8lmkn341yvjvd2r7wqwb3mr242r0v"; depends=[]; }; SPSL = derive2 { name="SPSL"; version="0.1-8"; sha256="1jg1nfhz8qml1wwqa4d0w7vkdmbgdy5xlfqx0h2pdw2z8iij3xxc"; depends=[]; }; + SPUTNIK = derive2 { name="SPUTNIK"; version="1.0.0"; sha256="0620nw9i1li52q0h5ygqs5zjl9ciblz3qdx31i3qwbz2c1gza9hy"; depends=[autothresholdr ggplot2 imager infotheo reshape SDMTools spatstat viridis viridisLite]; }; SPYvsSPY = derive2 { name="SPYvsSPY"; version="0.1.1"; sha256="1hxc73wwrzqh1r1xr9yd4hy4ma24virg4iv978lfyc9f9n56znp5"; depends=[]; }; SPmlficmcm = derive2 { name="SPmlficmcm"; version="1.4"; sha256="1acs3560a7h6xx286m40abr9b7i5qihn6wni8flj0biahmsszzx6"; depends=[nleqslv]; }; SPreFuGED = derive2 { name="SPreFuGED"; version="1.0"; sha256="1cdamkrr0xpc0l2dypd9lgjidrmalfxs0ms7z3wfmf22a8b3y0d2"; depends=[Biobase boot CMA lattice limma lme4 mvtnorm]; }; SQDA = derive2 { name="SQDA"; version="1.0"; sha256="0nfimk625wb64010r5r7hzr64jfwgc6rbn13wvrpn0jgayji87h6"; depends=[limma mvtnorm PDSCE]; }; SQN = derive2 { name="SQN"; version="1.0.5"; sha256="0kb8kf6g482zqdp4avwvhs3pqghfny757dbzfl1abaigmvwvx4qj"; depends=[mclust nor1mix]; }; - SQRL = derive2 { name="SQRL"; version="0.1.0"; sha256="0s3q4ryzps8by8bhz26c6sax26a0vgd7f099sf4qdjl44274dmv0"; depends=[RODBC]; }; + SQRL = derive2 { name="SQRL"; version="0.1.1"; sha256="15sfw00ff2bil9y0y0dwzjqwqgh5h3266ny6clvgpsx4hsczzsmr"; depends=[RODBC]; }; SQUAREM = derive2 { name="SQUAREM"; version="2017.10-1"; sha256="10xj26x7qjyvzndnbjl5krr9wabnb9cbrnp3m7xg673g8ddr12cv"; depends=[]; }; SRCS = derive2 { name="SRCS"; version="1.1"; sha256="13zf3cqs53w68f9zc1fkb9ql84rvzn7g1hbykqrbvss8hjaq8x1r"; depends=[]; }; SRRS = derive2 { name="SRRS"; version="0.1.1"; sha256="0jv545a97q4pyl89lmhn3y0jhdzyq033mvx144x8lcgx59s7cyi3"; depends=[gtools tcltk2]; }; SSBtools = derive2 { name="SSBtools"; version="0.2.1"; sha256="1cqdmvh9gxyx2yciy0j54v84hl8cayifv368ip5y3k6g1cff6488"; depends=[]; }; - SSDM = derive2 { name="SSDM"; version="0.2.3"; sha256="177lh4qf9b7gwi911mhy8ypfqlpl7yhl60pznhwcpynk9iqp2hzx"; depends=[dismo e1071 earth gbm gplots mgcv nnet randomForest raster rpart SDMTools shiny shinydashboard shinyFiles sp spThin]; }; + SSDM = derive2 { name="SSDM"; version="0.2.4"; sha256="1zn0iaav58pjzd6ckm28w16pblkjxacj2s1daj0sk0423dhjkf76"; depends=[dismo e1071 earth gbm gplots mgcv nnet randomForest raster rpart SDMTools shiny shinydashboard shinyFiles sp spThin]; }; SSDforR = derive2 { name="SSDforR"; version="1.4.17"; sha256="0c4w1fl199ksb63xxpawmld8bri9vcpbd2ypx5qrdfk4if5jhrrf"; depends=[MASS psych TSA TTR]; }; SSL = derive2 { name="SSL"; version="0.1"; sha256="0fy6svf8xfni72bpsg8a5wr8ly46srhfixk8866lrcsp8pb6mqcd"; depends=[caret e1071 klaR NetPreProc proxy Rcpp xgboost]; }; SSLASSO = derive2 { name="SSLASSO"; version="0.0-1"; sha256="045w4j9rqqmkp1am838isa9an30hlvc46w9fkpl0q6npk6fl9rws"; depends=[]; }; SSM = derive2 { name="SSM"; version="1.0.1"; sha256="1h8yyzh5rn5jay70kyzvwirfndi049a5w28qigrjv5rxd7ml84l7"; depends=[]; }; - SSN = derive2 { name="SSN"; version="1.1.10"; sha256="0fhwshl6vwf9cvbg8j284i27vayjrslk5hpyvrby390jma9klk4i"; depends=[BH igraph lattice maptools MASS Matrix rgdal rgeos RSQLite sp]; }; + SSN = derive2 { name="SSN"; version="1.1.12"; sha256="1c2dx7d9izd4z76pvsbbfb0r1a6w45x96mv4vb9h99yafcw380nv"; depends=[BH igraph lattice maptools MASS Matrix rgdal rgeos RSQLite sp]; }; SSRA = derive2 { name="SSRA"; version="0.1-0"; sha256="1d0lg2dz8vf1d63366s5apm0ygrsfxivbrsij907r244zj6i1c37"; depends=[shape stringr]; }; SSRMST = derive2 { name="SSRMST"; version="0.1.1"; sha256="15s6vcmk8a27yw3rlfkajby6qkizp4sfiyi63m7hc86svd15x4wg"; depends=[survival survRM2]; }; SSrat = derive2 { name="SSrat"; version="1.0"; sha256="1qpsdfdngsgxx3mqgn4avl65w4v5v4jwsh1nnxzfn9iqi9mg4bhi"; depends=[plyr sna]; }; @@ -3350,10 +3426,11 @@ in with self; { STMedianPolish = derive2 { name="STMedianPolish"; version="0.2"; sha256="0jzgcfhm09cccg2nwbvrmnkah1psbnmg26rc2n7lz26n4b20p3l2"; depends=[gstat maptools nabor reshape2 sp spacetime zoo]; }; STPGA = derive2 { name="STPGA"; version="4.0"; sha256="198h2wzhv5lnyqypn7s5lilywby2pq3zdx8vk4qd72bybfwwli2c"; depends=[]; }; SUE = derive2 { name="SUE"; version="1.0"; sha256="0akv724s84v2zixvwywj1ydfnfvcjnaabv6gm0601nsrh6ij1mi6"; depends=[]; }; + SUMMER = derive2 { name="SUMMER"; version="0.1.0"; sha256="14dq64h931l8r4pfhdg3i8wabb08n1fnnp8ql1bmhl1z4dqbggfl"; depends=[classInt ggplot2 maptools RColorBrewer sp spdep survey survival]; }; SVMMaj = derive2 { name="SVMMaj"; version="0.2-2"; sha256="01njc7drq01r3364081dv9gn37vrql52zbrb60gd559f3jshqx3m"; depends=[kernlab MASS]; }; SVMMatch = derive2 { name="SVMMatch"; version="1.1"; sha256="1ykwrhlid4hs466xh3kv6y2qdhgk0jiglg0l3zwk5qlni6p26zc9"; depends=[Rcpp RcppArmadillo]; }; SWATmodel = derive2 { name="SWATmodel"; version="0.5.9"; sha256="1i48g9nbjfn30ppwyzyz3k181nscv4wx773l8mzfdwhx0nlv4kyj"; depends=[EcoHydRology]; }; - SWMPr = derive2 { name="SWMPr"; version="2.2.0"; sha256="1nq3wc06c7fga9v69fwk3dr348lb127wd9ikb59lgnx2w86g83mk"; depends=[data_table dplyr ggmap ggplot2 gridExtra httr lattice maptools oce openair RColorBrewer reshape2 tictoc tidyr XML zoo]; }; + SWMPr = derive2 { name="SWMPr"; version="2.3.0"; sha256="1z6gg8ih1m5nxm1kilpwxj4xvlbyqr67la7idrfa722y6f6264rf"; depends=[data_table dplyr ggmap ggplot2 gridExtra httr lattice maptools oce openair RColorBrewer reshape2 tictoc tidyr XML zoo]; }; SYNCSA = derive2 { name="SYNCSA"; version="1.3.2"; sha256="1m057lhfaf0n35rs3sipia04qgkp04hv7wf7rvnr7bhzic9f4vg3"; depends=[FD mice vegan]; }; SafeBayes = derive2 { name="SafeBayes"; version="1.1"; sha256="09bhd3z9ia2mvpn1h0hil00j6cm4x9y9ymxc3gj8wd4ybdi3jqlm"; depends=[]; }; SafeQuant = derive2 { name="SafeQuant"; version="2.3.1"; sha256="0rgi0ij33sdvkpmjynfmsj0f29kl9l9ylsqckg5x4v49m6mzq1yh"; depends=[Biobase corrplot data_table epiR gplots limma optparse seqinr]; }; @@ -3361,13 +3438,12 @@ in with self; { SampleSize4ClinicalTrials = derive2 { name="SampleSize4ClinicalTrials"; version="0.1.0"; sha256="0wx1rfyf753wppjwwb3l1zpmg4b2mwnwjcw45yzav54yxaszy2v3"; depends=[]; }; SampleSizeMeans = derive2 { name="SampleSizeMeans"; version="1.1"; sha256="1wbc46n8b8wbcxl21blbzs5728dr8r0l8d3jpzbha8pcav0xrh1m"; depends=[]; }; SampleSizeProportions = derive2 { name="SampleSizeProportions"; version="1.0"; sha256="0mvkvx3nni0l8ys68sq3h2zlbjvksdcdzxqlf03k0ca5bbcmdf9l"; depends=[]; }; - SamplerCompare = derive2 { name="SamplerCompare"; version="1.2.7"; sha256="149ipraps9dngmvpy5w5q9a1zgnwqblhawrk6184g52ij33jv4ji"; depends=[mvtnorm]; }; - SamplingStrata = derive2 { name="SamplingStrata"; version="1.1"; sha256="0yxwkj61l6s29yz4adg6im7imx7vz6v9lkvdyr04cig0dhikxch1"; depends=[memoise]; }; + SamplerCompare = derive2 { name="SamplerCompare"; version="1.2.9"; sha256="1fl9wgbfnkn2ai4swspl88crqpgd9b43hj8rkqkky4b49b8f6bj8"; depends=[mvtnorm]; }; + SamplingStrata = derive2 { name="SamplingStrata"; version="1.2"; sha256="1qz0pcmp8a9wbq8qx1j2bv1j4makx97v9n4aiklagnmszg2gvggy"; depends=[memoise]; }; SanFranBeachWater = derive2 { name="SanFranBeachWater"; version="0.1.0"; sha256="18w2q3hzcrbmagnjyrn1ikwiyjh723mjb2vy0d8p1a6za0460p9w"; depends=[dplyr lubridate magrittr readr rvest tibble xml2]; }; Scale = derive2 { name="Scale"; version="1.0.4"; sha256="1fa3840kji34qpbw6mxfavk8wq0vq0vx2w6ya71idbkxnvwc3y06"; depends=[Hmisc MASS psych]; }; SchemaOnRead = derive2 { name="SchemaOnRead"; version="1.0.2"; sha256="0xa53mqmv31gid6n82bnfmds6p8nkjlmkj15hyycxhja2j752knm"; depends=[caTools foreign haven ncdf4 network readbitmap readODS readxl tiff xml2]; }; - SciViews = derive2 { name="SciViews"; version="0.9-5"; sha256="199waafpn0ndg7szwfhw2jlgcx1f0pv7j0vix2vzz60knwm698xb"; depends=[ellipse MASS]; }; - SciencesPo = derive2 { name="SciencesPo"; version="1.4.1"; sha256="1y9ymm5h6mmcx1ncl7yq2nn681gm0hd25fgxxwill9bzpy34pdnr"; depends=[data_table ggplot2 htmltools lubridate pander Rcpp rstudioapi shiny stringr xtable]; }; + SciViews = derive2 { name="SciViews"; version="0.9-13"; sha256="11zkq3dz2c7l8qxm3wrr3b5bb9h70sf9qxaz983lqwpjva30baa8"; depends=[ellipse]; }; ScoreGGUM = derive2 { name="ScoreGGUM"; version="1.0"; sha256="0f7sjfr3a8b8y1n9lrwyiyyljls3rbz84d9s93psi2fnmjj0kvgw"; depends=[]; }; ScottKnott = derive2 { name="ScottKnott"; version="1.2-5"; sha256="1ywwhdghcy30mp2nhsk2yhgb37nrdmb9yan5vvzsg66bchc3xgll"; depends=[]; }; ScottKnottESD = derive2 { name="ScottKnottESD"; version="2.0.2"; sha256="08pg51rjvb29fhv8wx03q6ncfw616pszgpcdywkplbgab26rrx1q"; depends=[car effsize forecast reshape2]; }; @@ -3382,35 +3458,34 @@ in with self; { SeerMapperEast = derive2 { name="SeerMapperEast"; version="1.2.0"; sha256="1bafxrfjdq4ipml6zl6ng3piz8i6izm3b2daf8k1041mlbb35k6f"; depends=[sp]; }; SeerMapperRegs = derive2 { name="SeerMapperRegs"; version="1.2.0"; sha256="16byqrwmjwhgsfav344m99jpl403k9ajqgv74ibwms9319xqfz59"; depends=[sp]; }; SeerMapperWest = derive2 { name="SeerMapperWest"; version="1.2.0"; sha256="1mq88ljz86bk4mjj6pmrd8k61rf69s7g1j8by4c0s3c6fnkwb3qg"; depends=[sp]; }; - SegCorr = derive2 { name="SegCorr"; version="1.1"; sha256="1hfkwfq4s3xm0wip82v000x5axkzkn4vkv6wima4mrnlvwi2yb9k"; depends=[cghseg]; }; + SegCorr = derive2 { name="SegCorr"; version="1.2"; sha256="1g4bwfs539jf7ckzjyindi3v1av7vd38yz16m7cb20qqa0a33kbj"; depends=[jointseg]; }; Segmentor3IsBack = derive2 { name="Segmentor3IsBack"; version="2.0"; sha256="0c7ag9svd1xlm60padg41gvz7qnbcp41kg3cz2dvi9hy2yrqw0qd"; depends=[]; }; Sejong = derive2 { name="Sejong"; version="0.01"; sha256="1d9gw42dbs74w7xi8r9bs6dhl23y16yxqzyhqqayvcm98q3l77nf"; depends=[]; }; SeleMix = derive2 { name="SeleMix"; version="1.0.1"; sha256="1qzy59wbjh8llm66l70xi0p3lv94iawh2h5vwa9sqy2ra5vmpaxk"; depends=[mvtnorm]; }; - Select = derive2 { name="Select"; version="1.1"; sha256="16ih65dfk6s8xkn1mqdn2391x40lzlmfsv46g01ngpsym4dry8dq"; depends=[lattice latticeExtra Rsolnp]; }; + Select = derive2 { name="Select"; version="1.2"; sha256="0ljlh7zj4r3izns47sa8bx17ll0ki6p02fpjxwghy1hz9k6ak9ir"; depends=[lattice latticeExtra Rsolnp]; }; SelvarMix = derive2 { name="SelvarMix"; version="1.2.1"; sha256="02d16ffw5syq0d3yiim9jgrjlz99n956zxp23idpsmq6lb2whq66"; depends=[glasso Rcpp RcppArmadillo Rmixmod]; }; - SemiCompRisks = derive2 { name="SemiCompRisks"; version="2.7"; sha256="092mf3dfwa78rh9bh3a4f2gsflax013100a4zld47j5lkp24diy4"; depends=[MASS survival]; }; + SemiCompRisks = derive2 { name="SemiCompRisks"; version="2.8"; sha256="1f4cpqjb737fz6iiadhdi1ansfi5wj1zl403b3xw7l20k4f39952"; depends=[MASS survival]; }; SemiMarkov = derive2 { name="SemiMarkov"; version="1.4.3"; sha256="1qfsy88bd07xk3gy2r7cjcs6fhx9889aqn1494d92msxmc6zvcz7"; depends=[MASS numDeriv Rsolnp]; }; SemiPar = derive2 { name="SemiPar"; version="1.0-4.1"; sha256="05gnk4s0d6276rmnyyv6gy1wpkji3sw563n8l7hmi9qqa19ij22w"; depends=[cluster MASS nlme]; }; SemiParSampleSel = derive2 { name="SemiParSampleSel"; version="1.5"; sha256="0apbg8sddz2ab9170wvf7p6cgawvp4w13r97r5q7p3hx2hylb8sw"; depends=[CDVine copula gamlss_dist magic Matrix matrixStats mgcv mvtnorm trust VGAM]; }; SenSrivastava = derive2 { name="SenSrivastava"; version="2015.6.25"; sha256="0r4p6wafnfww07kq19lfcs96ncfi0qrl8n9ncp441ri9ajwj54qk"; depends=[]; }; - SensMap = derive2 { name="SensMap"; version="0.4"; sha256="0qcdlw5zg6rxgrzy48pc4w6s32yccylz5jwkincbn0wcvaaxmvjy"; depends=[doBy factoextra FactoMineR fields ggdendro ggfortify ggplot2 glmulti lattice MCMCpack mgcv plotly shiny]; }; + SensMap = derive2 { name="SensMap"; version="0.6"; sha256="0j52aplvdlwwfswyrij0vv7zsdr015cn5931c6631rlps94gka0w"; depends=[doBy factoextra FactoMineR fields ggdendro ggplot2 glmulti lattice MCMCpack mgcv plotly shiny]; }; SensMixed = derive2 { name="SensMixed"; version="2.0-10"; sha256="0r2lga40xr782n1viyxc4wn9gzgm7g2ick45pfnkgq6m60wx9rfh"; depends=[doBy ggplot2 Hmisc lme4 lmerTest plyr reshape2 shiny shinyBS xtable]; }; SensitivityCaseControl = derive2 { name="SensitivityCaseControl"; version="2.1"; sha256="00jqzqx7g0av9lw13is723gph486gb8ga0wgcmmzpmb24s5nya9z"; depends=[]; }; - SensoMineR = derive2 { name="SensoMineR"; version="1.20"; sha256="1qw97cixndg2h29bbpssl0rqag3w8im4nm9964lr7r012y5wdqhx"; depends=[cluster FactoMineR KernSmooth]; }; + SensoMineR = derive2 { name="SensoMineR"; version="1.23"; sha256="0a1s2wrb86a0y2faxj5ax8fa6vfcclgg7bcff4j7jb40ilxnxhn4"; depends=[AlgDesign cluster FactoMineR ggplot2 gtools KernSmooth reshape2]; }; SensusR = derive2 { name="SensusR"; version="2.2.0"; sha256="0ahgy6mvlxfdavdarmfmb1ld1pykhbrjgg8mdh5q71b3a75vbp47"; depends=[ggmap ggplot2 jsonlite lubridate openssl plyr R_utils]; }; SentimentAnalysis = derive2 { name="SentimentAnalysis"; version="1.3-0"; sha256="098w4kcd6xsgwi996plm06nmyg8f7sg9wjphymmfl29k5y2zyz4s"; depends=[ggplot2 glmnet mgcv moments ngramrr qdapDictionaries SnowballC spikeslab stringdist tm XML]; }; SeqAlloc = derive2 { name="SeqAlloc"; version="1.0"; sha256="04rhr3gb2p9i35a3x4k8m0lv42ncfqlhx6sf3bq8yihppwrag8x3"; depends=[]; }; SeqFeatR = derive2 { name="SeqFeatR"; version="0.2.4"; sha256="0wk40lhx2bjyfl8gcv9g1c3bm7kf3b12pfdb0zk22vcp2flr0mci"; depends=[ape Biostrings calibrate coda ggplot2 phangorn plotrix plyr qvalue R2jags scales tcltk2 widgetTools]; }; SeqGrapheR = derive2 { name="SeqGrapheR"; version="0.4.8.5"; sha256="041hlf64zbndz76r076pmym4dw4xl3fahryvpvjspw0sdlhmfm8c"; depends=[Biostrings cairoDevice gWidgets gWidgetsRGtk2 igraph rggobi]; }; - SeqKat = derive2 { name="SeqKat"; version="0.0.4"; sha256="0n6crb2lvyvx86k3ipyc29q5g4f452pdn3c77303y6jhbpy4hcjd"; depends=[doParallel foreach Rcpp]; }; SeqMADE = derive2 { name="SeqMADE"; version="1.0"; sha256="0nf1xjhk0kpmmzgcxycg3ccxvwq6gydjq7xq6n9m7k7v35v9v3qf"; depends=[MASS]; }; SequenceAnalysis = derive2 { name="SequenceAnalysis"; version="1.3"; sha256="0jrpq5ryw7rwkv99w0a5p3r0vj8nbzj6adlcsr84d9ffgxafmhif"; depends=[XML]; }; Sequential = derive2 { name="Sequential"; version="2.3.2"; sha256="01zvgvdj57js08krskahk1ng3wkv9iblmirslgrmllf4q18zwsdr"; depends=[]; }; SequentialDesign = derive2 { name="SequentialDesign"; version="1.0"; sha256="1gi37pixwbpy7358id1c75rckr352hs8vjs8sk8qgsr97pkm5xdq"; depends=[Sequential]; }; - SetMethods = derive2 { name="SetMethods"; version="2.1"; sha256="1n6pd6cs11qahbfimqg1mskvq364gs1hvjbyygr49pv28cb3rig7"; depends=[betareg lattice QCA]; }; + SetMethods = derive2 { name="SetMethods"; version="2.3"; sha256="10xzvr7xfv2vwa3byw4qb3v8gi8d36w9drjzqsxx52ffnjb95670"; depends=[betareg fmsb lattice QCA]; }; SetRank = derive2 { name="SetRank"; version="1.1.0"; sha256="0p7vwsw05s5hfw1mfh3fbm9nfzsymnxzrdjin7k21dx7asb618wy"; depends=[data_table igraph XML]; }; SetTest = derive2 { name="SetTest"; version="0.1.0"; sha256="0b5lkdhaymi3vsx9acdn9jxvqwwsac9lbdr43c44c06gglqlvk47"; depends=[]; }; - Seurat = derive2 { name="Seurat"; version="2.1.0"; sha256="1hqaq6bciikrsyw157w8fn4jw885air7xbkxrmism93rp4qx483x"; depends=[ape caret cowplot diffusionMap dplyr dtw FNN fpc gdata ggjoy ggplot2 gplots gridExtra Hmisc ica igraph irlba lars MASS Matrix mixtools NMF pbapply plotly ranger RColorBrewer Rcpp RcppEigen RcppProgress reshape2 ROCR Rtsne SDMTools stringr tclust tidyr tsne VGAM]; }; + Seurat = derive2 { name="Seurat"; version="2.2.1"; sha256="1sr82nf38hq07avrfn8vlrzjq7dfm4pcr8l1nh6mnglcql2bk9z2"; depends=[ape caret cowplot diffusionMap dplyr dtw FNN fpc gdata ggplot2 ggridges gplots gridExtra Hmisc ica igraph irlba lars MASS Matrix metap mixtools pbapply plotly ranger RColorBrewer Rcpp RcppEigen RcppProgress reshape2 ROCR Rtsne SDMTools stringr tclust tidyr tsne VGAM]; }; ShapeChange = derive2 { name="ShapeChange"; version="1.4"; sha256="1ch7avx8mxjk8vrp17inaihmbsv968wflyk1n4fbjvacbl24vn2b"; depends=[coneproj quadprog]; }; ShapePattern = derive2 { name="ShapePattern"; version="1.0.1"; sha256="18jzs0sq21qhldm86mgx7yb9kl473vv1aljl9hm4560xy5pd5fnb"; depends=[rgdal rgeos sp]; }; ShapeSelectForest = derive2 { name="ShapeSelectForest"; version="1.3"; sha256="1vvfl1ldrn0l9w38hx0hhszvj5a2dpmfl6ljzw7f0ji181lrx96m"; depends=[coneproj raster rgdal]; }; @@ -3421,7 +3496,7 @@ in with self; { ShortForm = derive2 { name="ShortForm"; version="0.3.0"; sha256="03yxn535yv11l5ckw26jd0maf2k0xpvichid5vwn0vb1f6ryk1xn"; depends=[lavaan MplusAutomation]; }; ShrinkCovMat = derive2 { name="ShrinkCovMat"; version="1.2.0"; sha256="1ybd8vm69y50lj2mkmcdyplxb689xfg4spbl129v8hlvhw69mzmy"; depends=[]; }; SiER = derive2 { name="SiER"; version="0.1.0"; sha256="1ng6vnh30z6z1nvclsdzc9gdbrsrb2kqdqvs6fwm0j1zqlk12x0y"; depends=[]; }; - SiMRiv = derive2 { name="SiMRiv"; version="1.0.2"; sha256="1hw71qifj30mr750aci82i14a1r85mgaqb6yd0by39rf96qw7s8i"; depends=[mco raster rgdal sp]; }; + SiMRiv = derive2 { name="SiMRiv"; version="1.0.3"; sha256="1kzvbzmqcxs0sh23nmjd39zkg68kbnc5djpbjhqhn55qjdfx5776"; depends=[mco raster rgdal sp]; }; SiZer = derive2 { name="SiZer"; version="0.1-4"; sha256="0kiwvxrfa2b49r2iab5v2aysc2yzk5ck3h41f2hr0vq5pdnz0qy5"; depends=[boot]; }; SigOptR = derive2 { name="SigOptR"; version="0.0.1"; sha256="1sylchhhz6kx4r8jx95cvsmjsacjh8pin7acf2fyw2a4nlx9r1a6"; depends=[httr jsonlite]; }; SigTree = derive2 { name="SigTree"; version="1.10.6"; sha256="18gh7azjr979ijc2y4yyskj24ay697rw3j7znc5p4a63s4vpxr9w"; depends=[ape MASS phyext2 phylobase phyloseq RColorBrewer vegan]; }; @@ -3430,13 +3505,15 @@ in with self; { Sim_DiffProc = derive2 { name="Sim.DiffProc"; version="4.0"; sha256="04p6q3g0afyky2ljxf471axik6vwj9l4dv4r487jrykrlhnjrm4z"; depends=[Deriv MASS rgl scatterplot3d]; }; Sim_PLFN = derive2 { name="Sim.PLFN"; version="1.0"; sha256="1jmsydhpfv2z9cr99hfy8cairhkkxpwk4wnz1adixwxazkn7qfah"; depends=[DISTRIB FuzzyNumbers]; }; SimComp = derive2 { name="SimComp"; version="3.2"; sha256="04rmpxasaa888p6f0rhhpvpqc39fppdkcwbq5sxcslx7bwc9w9z8"; depends=[mratios multcomp mvtnorm]; }; + SimCop = derive2 { name="SimCop"; version="0.7.0"; sha256="1yrdy77a9h14v92c63ng8phi2ig73wy4xjjdb75322grc0bd3jq6"; depends=[quadprog]; }; SimCorMultRes = derive2 { name="SimCorMultRes"; version="1.5.0"; sha256="10afb3k4rvsmgfx6m1csb0pvnjba1d896llfh3ksmjzxglmvslgw"; depends=[evd]; }; - SimDesign = derive2 { name="SimDesign"; version="1.8"; sha256="015kkd7bizgdnynkyr1nl2bwssm4hjr5mg5gmrs6ikd8g04fzjnz"; depends=[foreach pbapply plyr]; }; + SimDesign = derive2 { name="SimDesign"; version="1.9"; sha256="1pwci1n7psrsv4mbl1mw3806cilmf3y9v507cdlzcd8jxl354vj7"; depends=[foreach pbapply plyr]; }; SimHaz = derive2 { name="SimHaz"; version="0.1"; sha256="04q4xyc1ki1zr3grm3khfg0kbykjy3j9qpg332l7pxp4j3wa3aw3"; depends=[survival]; }; SimInf = derive2 { name="SimInf"; version="5.1.0"; sha256="0ylkz6vybwza7fk24f4gybwm4afp0kcx0hlbl05jpif9gmwx6n3s"; depends=[Matrix]; }; SimMultiCorrData = derive2 { name="SimMultiCorrData"; version="0.2.1"; sha256="08zd9bvi3vi2nz3ljaw9rymmqwg1k9yislk3s4ak3jgqmcaq9zls"; depends=[BB GenOrd ggplot2 Matrix nleqslv psych triangle VGAM]; }; SimPhe = derive2 { name="SimPhe"; version="0.1.1"; sha256="00qqqsf7na5c9nslnfpbyr2ysf7d7bi6vnpfiy761nhg8vgf2vjv"; depends=[]; }; SimRAD = derive2 { name="SimRAD"; version="0.96"; sha256="0ivvd3k04v1akbblxcjhlyc315z3ig7wjs0g3b37lvlfp54ppbrg"; depends=[Biostrings ShortRead zlibbioc]; }; + SimRVPedigree = derive2 { name="SimRVPedigree"; version="0.1.0"; sha256="1krdz4gxnqxj3wabc5hn7ayfqdfmpgg66zj09b3jnngcdaxkjlwb"; depends=[dplyr kinship2]; }; SimReg = derive2 { name="SimReg"; version="3.0"; sha256="188q399xcrvjw7y7lf3hfbb7x0m0hc4zaf9i1w2c4xzswmvljd8r"; depends=[ontologyIndex ontologyPlot ontologySimilarity Rcpp]; }; SimSCRPiecewise = derive2 { name="SimSCRPiecewise"; version="0.1.1"; sha256="0mhlx9m5db8a40wf275qh59345676m8bpjjmyx1v22f6m9p3b2n4"; depends=[]; }; SimSeq = derive2 { name="SimSeq"; version="1.4.0"; sha256="068gg484w07qb4wajik2s3z79xfj0jg5l4pz69267dxi5kzd9fas"; depends=[fdrtool]; }; @@ -3474,20 +3551,22 @@ in with self; { SocialPosition = derive2 { name="SocialPosition"; version="1.0.1"; sha256="1rrrjlq6czzhzipvkisbq024ca22v2vzx7wa4ddr9j7hnyyzzpic"; depends=[]; }; Sofi = derive2 { name="Sofi"; version="0.16.4.8"; sha256="0h9ir0xrwmsabfhwsr9hbpwabh1fsb3p51y8qcgm92iyvc6dl3mf"; depends=[foreign sampling shiny]; }; SoftClustering = derive2 { name="SoftClustering"; version="1.1502"; sha256="1pgg9mjpfw55m3ny726vx5wl8gwsdkrxv8xzgmy3aqdlwzhh4bwz"; depends=[]; }; + SoilHyP = derive2 { name="SoilHyP"; version="0.1.0"; sha256="030xzhd2mfibj4z3d73zplx814w9mpsf08bdllj6crqd9ipj4sbq"; depends=[]; }; SoilR = derive2 { name="SoilR"; version="1.1-23"; sha256="1cryypgnbck5hvkc2izrd8r10q2b97f2p1s46x4dk8p099gck5wg"; depends=[deSolve RUnit]; }; + SolveLS = derive2 { name="SolveLS"; version="1.0"; sha256="0yb2sx3wjhccmkq8p3jj5pp8dgsdfvv4hr88km5yajl950wkbizp"; depends=[Matrix Rcpp RcppArmadillo Rdpack]; }; SorptionAnalysis = derive2 { name="SorptionAnalysis"; version="0.1.0"; sha256="0drns1ajcga5z56hcgjxld1riwjn7vli8k1ma1xqifpy1qwy7ci6"; depends=[]; }; SortableHTMLTables = derive2 { name="SortableHTMLTables"; version="0.1-3"; sha256="1jgrqsm0cj8qlk0s4qn3b83w96mgpp5gmhgcg9q2glc72v8c4ljh"; depends=[brew testthat]; }; SoundexBR = derive2 { name="SoundexBR"; version="1.2"; sha256="0chc332v3wcz30v70yvdxhvcfdmvf4fj193cn00gl899xfxal89p"; depends=[]; }; - SoyNAM = derive2 { name="SoyNAM"; version="1.3"; sha256="128iq8rrj6nm8zdqrv17gsjxzdsfashgzk1k7lnw38w04a2g05zs"; depends=[lme4 NAM reshape2]; }; + SoyNAM = derive2 { name="SoyNAM"; version="1.4"; sha256="0b48nm3xgvzws9222fmq07chqx4yllz4qjgzxg156s0waxfrjjfi"; depends=[lme4 NAM reshape2]; }; SpATS = derive2 { name="SpATS"; version="1.0-6"; sha256="04ahj3haaxrpxijxcq2n922li3g6az29ibsmdhxf72dnr5v2qn63"; depends=[data_table fields plot3Drgl spam]; }; SpaCCr = derive2 { name="SpaCCr"; version="0.1.0"; sha256="0qm1fr6nnax3i1i77fi73x1z8db557avh6kivs0nskb1dfj8ri4m"; depends=[abind dplyr ggplot2 Rcpp RcppArmadillo tidyr]; }; - SpaDES = derive2 { name="SpaDES"; version="2.0.0"; sha256="1fbf40qyb0nhvk1sdzxwn7g3p73v325z9mkij1mzgjyprb91i9k9"; depends=[quickPlot reproducible SpaDES_addins SpaDES_core SpaDES_tools]; }; - SpaDES_addins = derive2 { name="SpaDES.addins"; version="0.1.0"; sha256="0jggwywzs5i9v3xvyqk6j39mwp45zjhh145pb972yrdivxlw6vhc"; depends=[devtools magrittr miniUI rstudioapi shiny SpaDES_core stringi]; }; - SpaDES_core = derive2 { name="SpaDES.core"; version="0.1.0"; sha256="17gr386xxp22i5ln7grd1dbfxmkwfs0fnhyd7v40lmwdknj7myl7"; depends=[chron CircStats data_table DEoptim DiagrammeR digest dplyr fastdigest fpCompare httr igraph lazyeval lubridate quickPlot R_utils RandomFields raster reproducible sp stringi]; }; - SpaDES_tools = derive2 { name="SpaDES.tools"; version="0.1.0"; sha256="178xcvh5m5hkyjiqq6bgk6a7r7nrfd4fv5r6g27b26inxlpxc2bg"; depends=[bit checkmate CircStats data_table fastdigest fastmatch ff ffbase fpCompare magrittr quickPlot RandomFields raster Rcpp reproducible sp]; }; + SpaDES = derive2 { name="SpaDES"; version="2.0.1"; sha256="00l05kc7mgip41r8yqq3nk2mr5i0acal2b4man5lsgb5vblp4ij9"; depends=[quickPlot reproducible SpaDES_addins SpaDES_core SpaDES_tools]; }; + SpaDES_addins = derive2 { name="SpaDES.addins"; version="0.1.1"; sha256="0sipgq00lacy7yk81crr8h7xfm4vs4h66w6rqsll8i7di19g13cj"; depends=[devtools magrittr miniUI rstudioapi shiny SpaDES_core stringi]; }; + SpaDES_core = derive2 { name="SpaDES.core"; version="0.1.1"; sha256="12w2yr4q440n68p4gcj82h7gzjd240khfxjwxpngfbhbgp7rmv4b"; depends=[crayon data_table DEoptim DiagrammeR digest dplyr fastdigest fpCompare httr igraph lubridate quickPlot R_utils raster RCurl reproducible sp stringi]; }; + SpaDES_tools = derive2 { name="SpaDES.tools"; version="0.1.1"; sha256="0qfwcgy0nx4754zqi8fhk6q11yv9c5w6pa0wds6szga53hwwdi8g"; depends=[bit checkmate CircStats data_table digest fastdigest fastmatch ff ffbase fpCompare httr magrittr quickPlot RandomFields raster Rcpp reproducible sp]; }; SpaTimeClus = derive2 { name="SpaTimeClus"; version="1.0"; sha256="1l204b8yd11pxwcb026xy39f4lps4sqk6mml8cybnjch8clk9djc"; depends=[Rcpp RcppArmadillo]; }; SpadeR = derive2 { name="SpadeR"; version="0.1.1"; sha256="0iy2rkq4vvps1a73kqq37zpsyl4pvl3vh07dwvpfhvp7f8nxbx99"; depends=[]; }; - SparseDC = derive2 { name="SparseDC"; version="0.1.14"; sha256="1ji01gdkks8g5shqf1qlvhq67a70jlsxqiyryiq13l678ibhngay"; depends=[]; }; + SparseDC = derive2 { name="SparseDC"; version="0.1.17"; sha256="0gsfj8631s67a0r9qjjll4rbb57nzk5fwm5bbggvf0027b9hk0pp"; depends=[]; }; SparseFactorAnalysis = derive2 { name="SparseFactorAnalysis"; version="1.0"; sha256="0lgfvydxb86r5hks1mf0p0yhgpx8s8fbkc3q6dimc728rw26qcv5"; depends=[directlabels ggplot2 MASS proto Rcpp RcppArmadillo truncnorm VGAM]; }; SparseGrid = derive2 { name="SparseGrid"; version="0.8.2"; sha256="057xbj2bhjm9i32kn39iscnqqdsvsmq0b8c92l8hnf9avf1sx10x"; depends=[]; }; SparseLearner = derive2 { name="SparseLearner"; version="1.0-2"; sha256="1qxycxpch2m2yyk97210gdzsizhlinc0hkhk5ak00rdgkrsxxc0k"; depends=[glmnet lqa mlbench qgraph RankAggreg SIS SiZer]; }; @@ -3496,15 +3575,16 @@ in with self; { SpatMCA = derive2 { name="SpatMCA"; version="1.0.0.2"; sha256="1xm29ybbdxspj2ylkkd9qh17sizz1gkc3l34y3d0ivmxz64vn6pj"; depends=[fields MASS Rcpp RcppArmadillo RcppParallel]; }; SpatPCA = derive2 { name="SpatPCA"; version="1.1.1.2"; sha256="0v694bmfgwhpz2072f7gshqasd2vywvrbk5ncwq74xk5qrcpx9i7"; depends=[Rcpp RcppArmadillo RcppParallel]; }; SpatialAcc = derive2 { name="SpatialAcc"; version="0.1-2"; sha256="1nyxxwvlnhz78pw31dqijp1crlar5nak5934s4h0a4sajv9syif2"; depends=[]; }; + SpatialBall = derive2 { name="SpatialBall"; version="0.1.0"; sha256="09iy1smfqnb0rd2s9a1wqgscb1plwcwwph6a8215l4zrs6svszv2"; depends=[dplyr ggplot2 hexbin lubridate RColorBrewer]; }; SpatialEpi = derive2 { name="SpatialEpi"; version="1.2.2"; sha256="172i4khjb2fh818bq7wdfdm79fwxjwi60nqfj69dgbgcaww55ffr"; depends=[maptools MASS Rcpp RcppArmadillo sp spdep]; }; SpatialEpiApp = derive2 { name="SpatialEpiApp"; version="0.3"; sha256="0svnnzqshk08s58ishy8xhqch44mb5svgfphkvpgysdd68dgaysr"; depends=[dplyr dygraphs ggplot2 htmlwidgets knitr leaflet mapproj maptools RColorBrewer rgdal rgeos rmarkdown shiny shinyjs SpatialEpi spdep xts]; }; - SpatialExtremes = derive2 { name="SpatialExtremes"; version="2.0-5"; sha256="0p56h2dbdgbxzvfrdjnbr1yxr3wrlsrfgfgk4j8gf4nb4j6mrbiz"; depends=[fields maps]; }; + SpatialExtremes = derive2 { name="SpatialExtremes"; version="2.0-6"; sha256="14clsb7w7p39ak00127lfa7irl67vqydvafkj8vs8qn9i3kaj6iz"; depends=[fields maps]; }; SpatialFloor = derive2 { name="SpatialFloor"; version="1.0.3"; sha256="14nbl0kb4c46kxvw900d972n78x6q0y9039l6p4r9w2i9ir7g1yh"; depends=[fields reshape2]; }; SpatialNP = derive2 { name="SpatialNP"; version="1.1-2"; sha256="048zzyy3hav8qg0zad2fsv5z1avdppwwdcv0rc6j635wzhdmsl1j"; depends=[]; }; SpatialPack = derive2 { name="SpatialPack"; version="0.2-3"; sha256="1gs0x3wj3hj663m6kszwhy3ibcx0lrslr127miy1rhz8683ij71c"; depends=[]; }; SpatialPosition = derive2 { name="SpatialPosition"; version="1.2.0"; sha256="140fg3bjj7383nrdbgnk9lccj4yjq65rkprqpmf4q0mwbc89mmqc"; depends=[raster rgdal rgeos sp]; }; SpatialTools = derive2 { name="SpatialTools"; version="1.0.2"; sha256="0n8l4k0dm9gwirhxwrajv5gx502px9qzlqi6skzx0k32hmymnazh"; depends=[Rcpp RcppArmadillo spBayes]; }; - SpatialVx = derive2 { name="SpatialVx"; version="0.6-1"; sha256="1yscz5w6ydh87qh4ncgn6br49pzg08nqgx95m5bmydqx2r74h9jg"; depends=[boot CircStats distillery fastcluster fields maps smatr smoothie spatstat turboEM waveslim]; }; + SpatialVx = derive2 { name="SpatialVx"; version="0.6-2"; sha256="12kwwhxlvlkss1rg9ipaw97l5kw50m7crpcpv1y420sf14873j7r"; depends=[boot CircStats distillery fastcluster fields maps smatr smoothie spatstat turboEM waveslim]; }; SpatioTemporal = derive2 { name="SpatioTemporal"; version="1.1.7"; sha256="0rc5zf8cnjw59azgqmslfz2dl5i17dfmb7ls5c849qybp2gn2zdv"; depends=[MASS Matrix]; }; SpecHelpers = derive2 { name="SpecHelpers"; version="0.2.7"; sha256="1v3v717ah2fkx9225860dwppdf5m6nnnaaa4iwmj30rn17nqr4jh"; depends=[gsubfn splancs]; }; SpeciesMix = derive2 { name="SpeciesMix"; version="0.3.4"; sha256="0d6hfmzxqcvg4fcvpsfxx36k95fwkws4rlylrixikndj2fncgwb5"; depends=[MASS numDeriv]; }; @@ -3522,10 +3602,10 @@ in with self; { Stack = derive2 { name="Stack"; version="2.0-1"; sha256="09fgfhw9grxnpl5yg05p9gvlz38iw4prns1jn14nj3qx01k5rnxb"; depends=[bit ff ffbase plyr stringr]; }; StagedChoiceSplineMix = derive2 { name="StagedChoiceSplineMix"; version="1.0.0"; sha256="1008gm6zv5k8lpv0qg42qjriajmx0n4kshjh76mvx91dpi788ivh"; depends=[plyr]; }; StakeholderAnalysis = derive2 { name="StakeholderAnalysis"; version="1.2"; sha256="164mah8h8izxaqp8hc43l6mlnf95pydkcx2laqrlqr9b0bybadxb"; depends=[]; }; - StanHeaders = derive2 { name="StanHeaders"; version="2.16.0-1"; sha256="0i1gq32ys7iwgbdrwc86ww8kj5aqc7jbl663dynackb7wmqwlb7r"; depends=[]; }; + StanHeaders = derive2 { name="StanHeaders"; version="2.17.2"; sha256="11fcc59z63rkgk6pp5vhb5avjlbhbjs2v5mn496ai9jms4223ivc"; depends=[]; }; StandardizeText = derive2 { name="StandardizeText"; version="1.0"; sha256="0s267k2b109pcdiyd26gm4ag5afikrnnb55d3cs6g2fvzp744hfp"; depends=[]; }; Stat2Data = derive2 { name="Stat2Data"; version="1.6"; sha256="0pk68ffc6ffpddfpf9wi8ch39h6k3r80kldld3z5pnql18rc8nvx"; depends=[]; }; - StatCharrms = derive2 { name="StatCharrms"; version="0.90.6"; sha256="1631zkjyqd3bw5ijh250hcklagx9xy5x5dks4v7qgzb730c7a9f6"; depends=[cairoDevice car clinfun coxme gWidgets gWidgetsRGtk2 lattice multcomp nlme R2HTML RGtk2 RSCABS survival]; }; + StatCharrms = derive2 { name="StatCharrms"; version="0.90.7"; sha256="082pwqn08b9ij0vmc68sf43fin2hp16mlpi3d0i9ynpda9v22nr8"; depends=[cairoDevice car clinfun coxme gWidgets gWidgetsRGtk2 lattice multcomp nlme R2HTML RGtk2 RSCABS survival]; }; StatDA = derive2 { name="StatDA"; version="1.6.9"; sha256="01bjygis14b3yfsfkjbvy0zlhjxysjf46cfcw8p4a4lwik3qp03b"; depends=[cluster e1071 geoR MASS MBA mgcv rgl robustbase sgeostat xtable]; }; StatDataML = derive2 { name="StatDataML"; version="1.0-26"; sha256="1lcckapbhqdbg6alnhm2yls66lnkxnxamdlzx6pbfqv1dhsy36gf"; depends=[XML]; }; StatMatch = derive2 { name="StatMatch"; version="1.2.5"; sha256="1162yqqrxkbpchdxdibpk5ccv55krvh9j150jgr047zzghr9ansa"; depends=[clue lpSolve proxy RANN survey]; }; @@ -3533,7 +3613,6 @@ in with self; { StatPerMeCo = derive2 { name="StatPerMeCo"; version="0.1.0"; sha256="1nm6brlj6h7jx8nqagrfk294ay3pfmkiizabwlb87qfnsfwchpk3"; depends=[]; }; StatRank = derive2 { name="StatRank"; version="0.0.6"; sha256="14d8v3bp8vgksi6q0mxajwd9s8zi6lns3qwi1vcr5xp9rjp4n6iy"; depends=[ggplot2 plyr truncdist]; }; SteinIV = derive2 { name="SteinIV"; version="0.1-1"; sha256="1bm4lc7g9h9jkb1dpzb84289bwxcywp0a8vylv6ipvhiqbqk5d95"; depends=[]; }; - SteinerNet = derive2 { name="SteinerNet"; version="2.0"; sha256="1b2jr9a1mf0b1kalm3ryq9lpw4xhsj1ac083rrdvrfb3y5psa716"; depends=[graph igraph limma RBGL]; }; Stem = derive2 { name="Stem"; version="1.0"; sha256="1fr02mi5qyxbqavdh2hg8ggw4nfjh3vs7g0vh834h6y0v53l71r5"; depends=[MASS mvtnorm]; }; StepReg = derive2 { name="StepReg"; version="1.0.0"; sha256="1ifdns1fpsjcbwcy19h5hxnd3an53qwba2a7gpn2571zb1phraz8"; depends=[Rcpp RcppEigen]; }; StepSignalMargiLike = derive2 { name="StepSignalMargiLike"; version="2.5.9"; sha256="11lsjiry04m6yf4n1q0kniad6qdrj88pkziabi5glivijq0dh1wr"; depends=[Rcpp]; }; @@ -3542,13 +3621,14 @@ in with self; { Stickbreaker = derive2 { name="Stickbreaker"; version="1.0.0"; sha256="11g97yj61s09d1687algr9f80gcgw8fadc1vbadglxh7l9wxj6lv"; depends=[lattice nnet xtable]; }; StockChina = derive2 { name="StockChina"; version="0.3.1"; sha256="1myxyfchnkskyqb5yciw1wfk3006f51y89ipzfjzdlfyzwy1lsp1"; depends=[]; }; Storm = derive2 { name="Storm"; version="1.2"; sha256="1fg8y9my9yp6px1gh43mr3m2s2z262mzq03pj52mqg3n186vk8z3"; depends=[permute rjson]; }; - StrainRanking = derive2 { name="StrainRanking"; version="1.1"; sha256="0q6k90if74320mrs2ccq2izynylr8zakciwbc2c6ms0v57aalwic"; depends=[]; }; + StrainRanking = derive2 { name="StrainRanking"; version="1.2"; sha256="1r8avm9xajqmsy4x7pgh1yaffq7wl5i5kg75kdilydwmii6n19i0"; depends=[]; }; StratSel = derive2 { name="StratSel"; version="1.2"; sha256="11dkhyh0xgl23f9ksxcjl6bqfhwm6k6i1chgx23dvjifbm6s5s5p"; depends=[Formula MASS memisc mnormt pbivnorm]; }; Strategy = derive2 { name="Strategy"; version="1.0.1"; sha256="0phja1r0qfvcswvw5w1x6ny86p84wkqb029fdqgw10djdm9xp0f2"; depends=[xts zoo]; }; StratifiedBalancing = derive2 { name="StratifiedBalancing"; version="0.2.0"; sha256="0iwzvschncb2vrmsawb6i94shn2cjbkph854x1z4ykr6ddw411g2"; depends=[plyr]; }; StratifiedRF = derive2 { name="StratifiedRF"; version="0.2.2"; sha256="0a5djia6xacs17nnr5knr1acwzicrffz73q9nvnhdmihazq8v27d"; depends=[C50 dplyr]; }; StreamMetabolism = derive2 { name="StreamMetabolism"; version="1.1.2"; sha256="1sv30i7armk7jhxg5x9lh0r9qq3xixn1k2h0q89halkh1yraal8a"; depends=[chron maptools zoo]; }; StressStrength = derive2 { name="StressStrength"; version="1.0.2"; sha256="1fq26bzmwsk4nzz9bgasyxz9alw8x2ssahz67mham7vw483w79pd"; depends=[]; }; + String2AdjMatrix = derive2 { name="String2AdjMatrix"; version="0.1.0"; sha256="058r30kjjna02nmd6ngqfcnn1yk5390i20xvl6qb5qk3bcp2wmxn"; depends=[stringr]; }; StroupGLMM = derive2 { name="StroupGLMM"; version="0.1.0"; sha256="1w0xizdmwqflfhqwygyq7fw5ci7pdzmr8dfv3j0g3ljbj84kndzd"; depends=[aod broom car ggplot2 lme4 lmerTest lsmeans MASS mutoss nlme pbkrtest phia survey]; }; StructFDR = derive2 { name="StructFDR"; version="1.2"; sha256="00h3mx7kf01snngkcarhyidqiycvnjhcs81x3kprgp6597md7ph1"; depends=[ape cluster dirmult matrixStats nlme]; }; SubCultCon = derive2 { name="SubCultCon"; version="1.0"; sha256="08q6k4nsv3gl5qk87s87smdg047yc2a4i7kg0fp08i7q7h62jkvz"; depends=[]; }; @@ -3561,12 +3641,12 @@ in with self; { Sunclarco = derive2 { name="Sunclarco"; version="1.0.0"; sha256="0jv92a4ciwkm0wa4irgb6ql3vf6v6p24fmbnk24pqp5p8drp8g5v"; depends=[survival]; }; Sunder = derive2 { name="Sunder"; version="0.0.4"; sha256="1na41nnscyc4v1qbwzfgqk503r39xxbi6f446pscrz3v0v121f1a"; depends=[mnormt]; }; SunterSampling = derive2 { name="SunterSampling"; version="1.0.1"; sha256="0qfld3j8xlpgp7c58zqw6gzm38m4d740lvdj5vmcflfcc6ja98sf"; depends=[]; }; - SuperExactTest = derive2 { name="SuperExactTest"; version="0.99.4"; sha256="0wjqvwff5ag8hh6v2plc774hk6ydsyvr6ihlp9a15v0f0p61x6bk"; depends=[]; }; + SuperExactTest = derive2 { name="SuperExactTest"; version="1.0.0"; sha256="184s0pnwv9irqjlv24svfz3ami559ln03wjknyj67pwi4pfbzz87"; depends=[]; }; SuperGauss = derive2 { name="SuperGauss"; version="1.0"; sha256="1yqskaz4zsx87mcb9p7081h2lilaiwa3213yxlkyihyans7gnmp8"; depends=[fftw Rcpp RcppEigen]; }; SuperLearner = derive2 { name="SuperLearner"; version="2.0-22"; sha256="1yajqqsxfrp9ybaa8ffwdrbwm3rfy5pgp6ma1ak43qg3plclllyr"; depends=[cvAUC nnls]; }; - SuperRanker = derive2 { name="SuperRanker"; version="1.0.1"; sha256="0s5d38xaan4jznb3nlr9rj054haf6wks0229lggykj8mfz746wky"; depends=[prodlim Rcpp]; }; + SuperRanker = derive2 { name="SuperRanker"; version="1.1.0"; sha256="19cfz89557ygf5dvvqykmxcr72sfa0s2d37pplp6iwbhkl4wfw04"; depends=[prodlim Rcpp]; }; SuppDists = derive2 { name="SuppDists"; version="1.1-9.4"; sha256="1ffx8wigqqvz2pnh06jjc0fnf4vq9z2rhwk2y3f9aszn18ap3dgw"; depends=[]; }; - Surrogate = derive2 { name="Surrogate"; version="0.5"; sha256="12gsl9m2yp96pa4q5n4wmgv4p31pbjdsmiydv6iafb3jyk2pgl3w"; depends=[lattice latticeExtra lme4 logistf MASS mixtools msm nlme OrdinalLogisticBiplot rgl rms survival]; }; + Surrogate = derive2 { name="Surrogate"; version="0.6"; sha256="18cqcnzf64wk33qshsamija0r9xpnca0w2a8qz1ikj9r21vabhhw"; depends=[lattice latticeExtra lme4 logistf MASS mixtools msm nlme OrdinalLogisticBiplot rgl rms survival]; }; SurrogateTest = derive2 { name="SurrogateTest"; version="1.0"; sha256="0dw8ic2rskwhj9f013q0j5my7qfsqihfis93frrlz4qag68jddqn"; depends=[survival]; }; SurvCorr = derive2 { name="SurvCorr"; version="1.0"; sha256="01rqdl503q1qnkn49iqnsjzis6azdsfi6s2hjky5k2zd6c9g18k5"; depends=[fields survival]; }; SurvDisc = derive2 { name="SurvDisc"; version="0.1.0"; sha256="0iqjimrljh9iaw3s406v6j03xg62ysf9xdia1yxr2ray38j8148c"; depends=[cubature MASS mvtnorm nlme simex survival]; }; @@ -3581,7 +3661,7 @@ in with self; { SyNet = derive2 { name="SyNet"; version="2.0"; sha256="0mb9dscddkvmkf7l3bbcy4dlfmrvvy588vxdqy5dr783bpa5dkiw"; depends=[tkrplot]; }; SymTS = derive2 { name="SymTS"; version="1.0"; sha256="17vhm00zd9yxl6li36bsfkm4rsizjsm93ibrzgqnkl72sqmmlwfi"; depends=[]; }; SyncMove = derive2 { name="SyncMove"; version="0.1-0"; sha256="1jlnsj5v8y5pijfkww7ng7nkwvj93naw29wcxxj130ww5qk7qk1z"; depends=[]; }; - SyncRNG = derive2 { name="SyncRNG"; version="1.2.1"; sha256="0360pdx2p8a6519y3ik5xfdm2yxndyl31p3bb73nj4ihmr4w6lmj"; depends=[]; }; + SyncRNG = derive2 { name="SyncRNG"; version="1.3.0"; sha256="0sywfmmy6mq6qsxkxjc67665snn1jds01j3h7ni1200igja139g2"; depends=[]; }; SynchWave = derive2 { name="SynchWave"; version="1.1.1"; sha256="127hllvig8kcs9gr2q14crswzhacv6v2s4zrgj50qdyprj14is18"; depends=[fields]; }; SynergizeR = derive2 { name="SynergizeR"; version="0.2"; sha256="0z32ylrjjvp8kr6lghhg57yq1laf9r0h8l3adysvis8bbpz2q2sj"; depends=[RCurl RJSONIO]; }; Synth = derive2 { name="Synth"; version="1.1-5"; sha256="1cfvh91nz6skjk8jv04fhwv3ga9kcsfgq3mdy8lx75jkx16zr0pk"; depends=[kernlab optimx]; }; @@ -3596,13 +3676,14 @@ in with self; { TBSSurvival = derive2 { name="TBSSurvival"; version="1.3"; sha256="1r87qvnlvc18i12yi25lfpdb8b5p33fywi38hs2xp1y2vbvz5s9b"; depends=[BMS coda mcmc normalp R_utils Rsolnp survival]; }; TCGA2STAT = derive2 { name="TCGA2STAT"; version="1.2"; sha256="15a5lh0nrdcxdwj7wj5m9rsvk1ygpp6wdjb4swilk91rb1lblikv"; depends=[CNTools XML]; }; TCGAretriever = derive2 { name="TCGAretriever"; version="1.3"; sha256="0mi8j7k2b1sx75ka8ympydqpk8jqp8wz8dyf4vk4776fra7bq24p"; depends=[httr]; }; - TCIApathfinder = derive2 { name="TCIApathfinder"; version="1.0.1"; sha256="0jxpv0a7lyd0lb5mijpfw0pcp80h9s7bhxn9j4w7bkwsg1n59c83"; depends=[httr jsonlite testthat]; }; - TDA = derive2 { name="TDA"; version="1.5.1"; sha256="1ab60b1wk2j4271vikbglkk12nwl77d5b9w3xqvzpcbrbjfqsmjh"; depends=[BH FNN igraph Rcpp RcppEigen scales]; }; + TCIApathfinder = derive2 { name="TCIApathfinder"; version="1.0.2"; sha256="1fgjmz297jckdb0xsly1scq5n8y8awfgdkr4yfml4lim2mkdsigx"; depends=[httr jsonlite]; }; + TDA = derive2 { name="TDA"; version="1.6"; sha256="1i0jgj72rpxn7icgl5f43c7lyq4jghmz4r9jn7bxa5kbavc8asy3"; depends=[BH FNN igraph Rcpp RcppEigen scales]; }; TDAmapper = derive2 { name="TDAmapper"; version="1.0"; sha256="0cxgr2888v8azgdr3sg4vlcdyivkrxkk6dsp1ahv4frrwvg2z09k"; depends=[]; }; TDCor = derive2 { name="TDCor"; version="0.1-2"; sha256="18085prcwhl5w717f1f7jcqskw2jvigvjjs2l5y6106ibiam6hxx"; depends=[deSolve]; }; TDD = derive2 { name="TDD"; version="0.4"; sha256="193y8brybkjsajrbnlx1sdnw1wyyn9rhlm5wvp4aamqhvi8z13vn"; depends=[pracma RSEIS signal]; }; TDPanalysis = derive2 { name="TDPanalysis"; version="0.99"; sha256="1kyhs4rpkm3gr55l6hrz4xcb9igk95si1m1sp175580k16n885z0"; depends=[plyr]; }; TDboost = derive2 { name="TDboost"; version="1.2"; sha256="0sc9vby4892gm5b5h8gbdl4misqvgbkfp8fms53dk83malxkw1zx"; depends=[lattice]; }; + TE = derive2 { name="TE"; version="0.1-1"; sha256="05xm9hlcsrcqa3yfw1rp4fb08yjkp66lcvdpw3a3fnx7k69j5p3g"; depends=[MASS rainbow]; }; TED = derive2 { name="TED"; version="1.1.1"; sha256="0nb2arx7c1m8ymnkmj3jwbcw23vhkr1f3vlym2hqs0pq0lnsl4g0"; depends=[animation fields foreach geoR RcppArmadillo zoo]; }; TEEReg = derive2 { name="TEEReg"; version="1.1"; sha256="0v5qz3vvmcm3fh16kjb05j1r0yj23r7hrxf2www20ng3dmga5q0f"; depends=[]; }; TELP = derive2 { name="TELP"; version="1.0"; sha256="0wzm3dz0489ha7dd6lkashvvjydck9jw2pavlx9plpksvzr4q9ph"; depends=[arules arulesViz ggplot2 gridExtra RColorBrewer tcltk2 tm wordcloud]; }; @@ -3622,7 +3703,7 @@ in with self; { TLBC = derive2 { name="TLBC"; version="1.0"; sha256="08w187akbhfbz6nrrf7avf02lrhgj7bbrjmim9gkh4wlbjhzvw67"; depends=[caret HMM randomForest signal stringr]; }; TLMoments = derive2 { name="TLMoments"; version="0.7.2.1"; sha256="1xgkbdnh79dj54jg5kf0c5kwykcvjaf4y16yyqf0vcc7aand6a3y"; depends=[hypergeo Rcpp]; }; TLdating = derive2 { name="TLdating"; version="0.1.3"; sha256="12lmakk1zd6wqh1318pnl14i7km2hynjn4ymchfjr2bwmp45c1ra"; depends=[gplots Luminescence]; }; - TMB = derive2 { name="TMB"; version="1.7.11"; sha256="1v74iw4pmklhnq5rc0xaahrfd78bgz1fylnwp8gahha72lbcdzrq"; depends=[Matrix RcppEigen]; }; + TMB = derive2 { name="TMB"; version="1.7.12"; sha256="06gky76x5bc95l22ygnnamgdym7ysnqg42fa213ic9ws2rjv40ni"; depends=[Matrix RcppEigen]; }; TMDb = derive2 { name="TMDb"; version="1.0"; sha256="0bbcmsv7b3vvskhdjww03gbcgql44vsvyjz2fajy9w2vgkr6ga90"; depends=[httr jsonlite]; }; TNC = derive2 { name="TNC"; version="0.1.0"; sha256="0639wvylmk9mapvmz79ij65g1phv3ylc683awi4pgaf9yfwlmjkn"; depends=[]; }; TOC = derive2 { name="TOC"; version="0.0-4"; sha256="1c16d4wrzir6v3c323sck6r9yz6mv1a70xamlj5ha1ydmfixcza9"; depends=[bit raster rgdal]; }; @@ -3639,6 +3720,7 @@ in with self; { TRSbook = derive2 { name="TRSbook"; version="1.0.1"; sha256="1w2yl5pchw2vn9l3qnm1ra9mjy946i5xsxh5n5xdvrcj2kak50x5"; depends=[gdata IndependenceTests RColorBrewer xtable]; }; TSA = derive2 { name="TSA"; version="1.01"; sha256="0cm97hwxm6vfgy9mc3kgwq6dnmn86p8a4avnfjbai048qnwrn6hx"; depends=[leaps locfit mgcv tseries]; }; TSCS = derive2 { name="TSCS"; version="0.1.1"; sha256="0dllaw69rl26hgqac5q66k13gfmnxhn3wf0j8nx5xvi7yclzc3ay"; depends=[ggplot2 rgl tseries]; }; + TSEtools = derive2 { name="TSEtools"; version="0.1.0"; sha256="16wrlbgq4xli49hha0bsg4nrv33jy0sd0d6nnzvfiqaqw8jml3rs"; depends=[xts]; }; TSF = derive2 { name="TSF"; version="0.1.1"; sha256="0v3pq64yknp3n6lw6c87slv1avsv7rlb82gm670q4jzv5d174phv"; depends=[forecast fracdiff]; }; TSGSIS = derive2 { name="TSGSIS"; version="0.1"; sha256="0zrlin6xi6sv5qb18a0wi8lzldqlwa9lbwnra44w3jza3kakff7n"; depends=[glmnet MASS]; }; TSHRC = derive2 { name="TSHRC"; version="0.1-5"; sha256="05vv2zdkzlg04dicwa0lyww92fiafr7bnvsbm6990xkip1lf3cih"; depends=[]; }; @@ -3648,7 +3730,7 @@ in with self; { TSP = derive2 { name="TSP"; version="1.1-5"; sha256="03xxfr5kk4zhzpb1q1pwncdp0dhchm9b48wzhvvxn2dxf3mnby2w"; depends=[foreach]; }; TSPostgreSQL = derive2 { name="TSPostgreSQL"; version="2015.4-1"; sha256="11201zpbrva6gwc9hg8pynadrps6d8pb3syzba9nyjpv2ck6x3ry"; depends=[DBI RPostgreSQL tframe tframePlus TSdbi TSsql]; }; TSPred = derive2 { name="TSPred"; version="3.0.2"; sha256="0cbf5h3yrissng4xqrgbisarml772mg6b2ap508imf29zfks76gn"; depends=[forecast KFAS MuMIn]; }; - TSS_RESTREND = derive2 { name="TSS.RESTREND"; version="0.1.02"; sha256="1rvxbzhdzjb4f3b4pk53iwv0vpw8s0z8k1fyfpcxvy333f68d59f"; depends=[bfast broom ggplot2 RcppRoll strucchange]; }; + TSS_RESTREND = derive2 { name="TSS.RESTREND"; version="0.2.13"; sha256="0wbwkhc1b5dql87sj1441cknidpgwcflwlid2yj6d64a6wsipn1l"; depends=[bfast broom ggplot2 RcppRoll strucchange]; }; TSSQLite = derive2 { name="TSSQLite"; version="2015.4-1"; sha256="10z8s967wmapkb56hh2brb5bafgqr8flwh0sr72yqqv0ca2d06sc"; depends=[DBI RSQLite tframe tframePlus TSdbi TSsql]; }; TSTr = derive2 { name="TSTr"; version="1.2"; sha256="0nljkqsrwzg7i82arpfrz2k9m1k1akin1akf01c5cadxq4rgarsf"; depends=[data_table stringdist stringr]; }; TSTutorial = derive2 { name="TSTutorial"; version="1.2.3"; sha256="0hpk6k3lc72p8pdz5aad04lcjsz9k443h5gs09dc3i10wqw3yhxs"; depends=[MASS]; }; @@ -3661,18 +3743,20 @@ in with self; { TSfame = derive2 { name="TSfame"; version="2015.4-1"; sha256="197v123mkxr7qlksnb5iadms5zbc8xqbpgr2cspb8x1krz6phssz"; depends=[DBI fame tframe tframePlus tis TSdbi]; }; TSmisc = derive2 { name="TSmisc"; version="2016.8-1"; sha256="0xvn6qlvvdc65l356r8b5ppddjd35k9fc4b5w5wn3j5wzxfllbk1"; depends=[DBI gdata quantmod tframe tframePlus TSdbi tseries zoo]; }; TSodbc = derive2 { name="TSodbc"; version="2015.4-1"; sha256="0m6r97gs483jg6jlmfkbzxg3jvf6q140kvpidjccj224zb1sqlcq"; depends=[DBI RODBC tframe tframePlus TSdbi TSsql]; }; + TSrepr = derive2 { name="TSrepr"; version="1.0.0"; sha256="1r2704zx9mk5w9k98labslp9wqj23jgn28k5jl31lvwcqgj5qqpv"; depends=[dtt MASS mgcv quantreg Rcpp wavelets]; }; TSsdmx = derive2 { name="TSsdmx"; version="2016.8-1"; sha256="06h1iwgshiq4bvly5l1nrddrh2knc82z2aqxh8ls9ipbs7qjsvaf"; depends=[DBI rJava RJSDMX tframe tframePlus TSdbi]; }; TSsql = derive2 { name="TSsql"; version="2017.4-1"; sha256="0f71q6gqfx4r3ghsmr572cvkpmf2xf7kipf10ii99z1y23dxmsdn"; depends=[DBI tframe tframePlus TSdbi zoo]; }; + TSstudio = derive2 { name="TSstudio"; version="0.1.1"; sha256="1myvih5kd9pliczddjscqlq811dswqh9d8an8p5bi12h31w9pp30"; depends=[forecast lubridate magrittr plotly reshape2 xts zoo]; }; TTAinterfaceTrendAnalysis = derive2 { name="TTAinterfaceTrendAnalysis"; version="1.5.3"; sha256="0a1v0lsfcn32w5rwcjwmvh0rghamwr5a76rx3npa6kv0dymnvhxf"; depends=[e1071 lubridate multcomp mvtnorm nlme pastecs relimp reshape tcltk2 zoo]; }; TTCA = derive2 { name="TTCA"; version="0.1.1"; sha256="16slr4c2nwbchsg6fk5prq22p2v4cjxzk93wd3xggav2lzrf8a5h"; depends=[MASS Matrix quantreg RISmed tcltk2 VennDiagram]; }; - TTR = derive2 { name="TTR"; version="0.23-2"; sha256="0djlqwbqqzlnjali8qs00vvd6h0qa8rmcr7csrrxan0x6v9c27qs"; depends=[curl xts zoo]; }; + TTR = derive2 { name="TTR"; version="0.23-3"; sha256="07r62ngyzjl4aszdxnr3n6bnbcgcap32yhd430jsilicg8n06di1"; depends=[curl xts zoo]; }; TTS = derive2 { name="TTS"; version="1.0"; sha256="0dhxj474dqjxqg0fc2dcx8p5hrjn9xfkn0rjn2vz3js92fa9ik9h"; depends=[mgcv sfsmisc]; }; TTmoment = derive2 { name="TTmoment"; version="1.0"; sha256="0a4rdb4fk1mqnvvz0r15kni0g5vcj4xkkcwwv7c2gxc94xh5i5ih"; depends=[mvtnorm]; }; TUWmodel = derive2 { name="TUWmodel"; version="0.1-8"; sha256="0c00jd2bq4i5fd55hj7l2grkpn990p0kmhbsh95b2zrzhbwgcjp6"; depends=[]; }; Table1Heatmap = derive2 { name="Table1Heatmap"; version="1.1"; sha256="1nrabjivfsdhaqmlq365pskkrp99jqsxn8vy03mdnqn5h5zv7wvx"; depends=[colorRamps]; }; TableMonster = derive2 { name="TableMonster"; version="1.2"; sha256="1cl70d0svzx8nsg6kw5dv50s9d6wxqkyg39d2d4vissbpilq6arn"; depends=[xtable]; }; TableToLongForm = derive2 { name="TableToLongForm"; version="1.3.1"; sha256="135q0bgsm2yndrg3vpwmihbqlyf3qkm97i0jvcw6bf06p6b2fk41"; depends=[]; }; - TailRank = derive2 { name="TailRank"; version="3.1.3"; sha256="1d1i2i12lg4isyy9d37anpd26v7jp9ph5p82dkv66bhsj8fb0y8m"; depends=[Biobase oompaBase oompaData]; }; + TailRank = derive2 { name="TailRank"; version="3.2.0"; sha256="15m4wzhngrv8001r2cmq0a4a7j2kk8p061rhnpbqa7mfbfg6jkr5"; depends=[Biobase oompaBase oompaData]; }; TanB = derive2 { name="TanB"; version="0.1"; sha256="05y9j1a5nzqfpsw48gix5c4ds1cm80liad9wnwmddhbx4fda6p32"; depends=[fdrtool pracma]; }; TaoTeProgramming = derive2 { name="TaoTeProgramming"; version="1.0"; sha256="1b36s5mpm5vbhzcwmvm8g5pl7vpn6rsl5cnglfy8kgm1q9nnr7ff"; depends=[]; }; TapeR = derive2 { name="TapeR"; version="0.3.3"; sha256="0q5j7pn05z7hinwl5ypnrgh9ibsw6hvdfszjbnvavzab3bx8l6nn"; depends=[nlme pracma]; }; @@ -3688,16 +3772,15 @@ in with self; { TeachingDemos = derive2 { name="TeachingDemos"; version="2.10"; sha256="016pivvy8gzz8f3clnr5dg488rb1lf0l5s00c3v34gm1dgiw5x1f"; depends=[]; }; TeachingSampling = derive2 { name="TeachingSampling"; version="3.2.2"; sha256="07c1wx7hl246kvj9ah55kdjpag8a9zbzh3jy0680w5nnv8vzsxxs"; depends=[]; }; TempleMetrics = derive2 { name="TempleMetrics"; version="1.1.0"; sha256="02cs2dgcmxgz1y98x4rpq4l4khqvbnr0248s6rgrgq5l3z2s4qr0"; depends=[BMisc pbapply]; }; - Ternary = derive2 { name="Ternary"; version="0.1.1"; sha256="0y5ayjqv6prz44gn4j3c94k96vjhglq9qdaxxhwij1cqdf8vgylf"; depends=[]; }; + Ternary = derive2 { name="Ternary"; version="1.0.0"; sha256="1dqkvddsb0g4bhiqnq22n4lfkxcrwimygai5lsrn1nlijyhcxfn1"; depends=[]; }; TestDataImputation = derive2 { name="TestDataImputation"; version="1.0"; sha256="07k4sgjda1gwdlx5rap5fhs5rww2ahzyf0fq98dsm99gvjajnmwn"; depends=[Amelia mice]; }; TestFunctions = derive2 { name="TestFunctions"; version="0.2.0"; sha256="018nkz8r6vqahrzq3d588i3ffb1bmd1pdk87j4ivcdsx99mq15sn"; depends=[]; }; TestScorer = derive2 { name="TestScorer"; version="1.7.2"; sha256="006c3g3gx55mfr93srldwvgz5vm6nkr3f57yi4qg6krn0d32865f"; depends=[]; }; - TestSurvRec = derive2 { name="TestSurvRec"; version="1.2.1"; sha256="05f5gc8hvz09hx015jzis6ikki9c1brdq7l7a9bxm9bqbcc9f2f9"; depends=[boot survrec]; }; TestingSimilarity = derive2 { name="TestingSimilarity"; version="1.0"; sha256="1fagy9168cz09p460pa0qyn8m79zg4i2b9j5vg8gm1ssqi2znsl9"; depends=[alabama DoseFinding lattice]; }; - TexExamRandomizer = derive2 { name="TexExamRandomizer"; version="1.2.2"; sha256="0v81qhpwm0ir3v6hiv5lrl5ilchj5qw6dhvl35nmzcs2j7idpak6"; depends=[assertthat jsonlite Rcpp stringr]; }; + TexExamRandomizer = derive2 { name="TexExamRandomizer"; version="1.2.3"; sha256="0l0vpx4rkib2m8hwhwy9j8pqyf7gpb9qg8wpnh3238snwpadgy3a"; depends=[assertthat jsonlite Rcpp stringr]; }; ThankYouStars = derive2 { name="ThankYouStars"; version="0.2.0"; sha256="0r77ns3102wj1wvrfsa06l427imxyfhigpbs36cdxl2j87qrjzl6"; depends=[httr jsonlite]; }; ThermIndex = derive2 { name="ThermIndex"; version="0.2.0"; sha256="0s9d55577dq61qixwwfwmqc2k2c8my00j2ng97ng42cw0jc7aylm"; depends=[]; }; - Thermimage = derive2 { name="Thermimage"; version="3.0.0"; sha256="0l098praarg5kg0m5hxs9zbwhl8w7g48ngyiry1rlwkp2rsl3cza"; depends=[png tiff]; }; + Thermimage = derive2 { name="Thermimage"; version="3.1.0"; sha256="1gbbmmgmp6a8swl6kdfzf4kj9dpm17m809r2xrc58wg8gslx8m1c"; depends=[png tiff]; }; Thinknum = derive2 { name="Thinknum"; version="1.3.0"; sha256="0j48vgr4wsc2chm95aprq0xm0dk720xk5zmiijxasg92sfp0va6n"; depends=[RCurl RJSONIO]; }; ThreeArmedTrials = derive2 { name="ThreeArmedTrials"; version="1.0-0"; sha256="075cn99k06lgdd0cwl1i9242fcxwmd5malcyks0mmwjf9kzw00z2"; depends=[MASS numDeriv]; }; ThreeGroups = derive2 { name="ThreeGroups"; version="0.21"; sha256="0hipxa45v9ysb2qbk33kjycnvqar7bff1ajxd6fzhpc3jc9hflw4"; depends=[]; }; @@ -3710,45 +3793,48 @@ in with self; { TideTables = derive2 { name="TideTables"; version="0.0.2"; sha256="1grm9s9np7xs2d8gql4sgg72rxpxiidw6g1ni8q97qgqr7r3105l"; depends=[chron data_table]; }; Tides = derive2 { name="Tides"; version="2.0"; sha256="0s7ja0vs8ag7myjq4kmza4ja9p76sdbbkaaamxbsgp9yaf02c6nf"; depends=[]; }; TileManager = derive2 { name="TileManager"; version="0.2.0"; sha256="1zk5q1m3imlr9ms81jyb9kibm0m5zmiidsv86qgnqj8r4b8hpqyh"; depends=[APfun raster rgeos sp]; }; - TilePlot = derive2 { name="TilePlot"; version="1.3.1"; sha256="0yfzjyzc743rv5piw9mb7y0rr558hkxszgz49lya2w3i1mqvxbzy"; depends=[]; }; TimeMachine = derive2 { name="TimeMachine"; version="1.2"; sha256="1dz0j777wmd8mpkm2ryiahpcw6w88w429zjcw6m67pi20r1992cb"; depends=[]; }; TimeProjection = derive2 { name="TimeProjection"; version="0.2.0"; sha256="04yr4cg2khkw9n3y3qk0ni1327k4pxm09zz2xg8mpjdvgi4p9yi3"; depends=[lubridate Matrix timeDate]; }; + TimeSeries_OBeu = derive2 { name="TimeSeries.OBeu"; version="1.2.2"; sha256="1a44fb29yacwgdiwaf5fpxzc5222cpi5mkv7l0dh43b6lh8f0j5k"; depends=[forecast jsonlite locfit trend tseries]; }; + TimeVTree = derive2 { name="TimeVTree"; version="0.2.1"; sha256="0657y6s4w83yda36q1isr3zwd8vv9wminljdpivs8c89p0cwm3yb"; depends=[survival]; }; TimeWarp = derive2 { name="TimeWarp"; version="1.0.15"; sha256="1v6f6d1h9dc8npdy0ph5hhc4jjkzh8kac48lz4ahgngi9n0xwql9"; depends=[]; }; Tinflex = derive2 { name="Tinflex"; version="1.2"; sha256="0rx4aj0bxiaaap3f43jzf3rlmrjp0g8aplg1ybccdyahx4p727bn"; depends=[]; }; - TipDatingBeast = derive2 { name="TipDatingBeast"; version="1.0-6"; sha256="07880h9q14m2pscm132zx91ps07sya9jwfcmsmhy8rjkdw5zjnik"; depends=[DescTools mclust TeachingDemos]; }; + TipDatingBeast = derive2 { name="TipDatingBeast"; version="1.0-7"; sha256="1lc63xghjny45nkrppf06lxvhbqnw9w5i06bmncm90hm0kam092b"; depends=[DescTools mclust TeachingDemos]; }; TippingPoint = derive2 { name="TippingPoint"; version="1.1.0"; sha256="1f5bfag892yk47r1pw2rlvqz9qnkaz8radprpxh0q0knviw3f9fp"; depends=[bayesSurv ggplot2 RColorBrewer reshape2]; }; Tlasso = derive2 { name="Tlasso"; version="1.0.1"; sha256="0flx4l7q3qndp77349ayfrszyim7mvs7yfvv3j9a1mhf3gdn9j14"; depends=[expm huge igraph rTensor]; }; Tmisc = derive2 { name="Tmisc"; version="0.1.17"; sha256="11i807ma7mhx9ba675ifs42b5gr2dgr2z2zx35ga0jav464n9vk0"; depends=[audio dplyr rstudioapi tibble]; }; Tnseq = derive2 { name="Tnseq"; version="0.1.2"; sha256="1n76yzk15p8i5bp3k6fszmdqk2d791r4sb8hg5hb61zb92r7wqlj"; depends=[Biobase Ckmeans_1d_dp DESeq edgeR limma]; }; ToolsForCoDa = derive2 { name="ToolsForCoDa"; version="1.0.2"; sha256="0x05phwm6gqw1pmars1ypg86sggflffw9g2d0lc5gfsy93nrg0rv"; depends=[calibrate HardyWeinberg MASS]; }; TopKLists = derive2 { name="TopKLists"; version="1.0.6"; sha256="1hmm9g68scq8sqdb9axqn51p00mx6p6lw0fdgjljfi2q72xcqhq3"; depends=[gplots Hmisc]; }; - TotalCopheneticIndex = derive2 { name="TotalCopheneticIndex"; version="0.1"; sha256="1477zp8jzq1p22q8484vkrdx5nxwq4i44mxg4zhj9fixiw4shpx9"; depends=[ape]; }; - TraMineR = derive2 { name="TraMineR"; version="2.0-7"; sha256="0skc52da2l137zx015yx28bw43z4snl01ahm7d0x1gnp3ps7lvr9"; depends=[boot cluster Hmisc RColorBrewer]; }; - TraMineRextras = derive2 { name="TraMineRextras"; version="0.4.1"; sha256="11vr9f0l4bg4cga5wfflrmq3zhs1hdwmv18xxgni194g642h7k8b"; depends=[cluster RColorBrewer survival TraMineR]; }; + TotalCopheneticIndex = derive2 { name="TotalCopheneticIndex"; version="1.0.0"; sha256="1w8irl49cxg0rsbk57cl443gmy4i3vrh3ialx9c9d08wc7d2zisa"; depends=[]; }; + TraMineR = derive2 { name="TraMineR"; version="2.0-8"; sha256="0x4ppghg7rbsj7q4q274vcs6kcwajjbi0s181r5qmzbxf20l8k9r"; depends=[boot cluster Hmisc RColorBrewer]; }; + TraMineRextras = derive2 { name="TraMineRextras"; version="0.4.2"; sha256="1k2s3syx27vma5k0qcfx2579jyaxmx7crizkvz3wplhzdwag7wbk"; depends=[cluster RColorBrewer survival TraMineR]; }; TrackReconstruction = derive2 { name="TrackReconstruction"; version="1.1"; sha256="1f2l3nshb6qrhyczw5rxqqzmsjxf0rvv3y78j8d9lv1nnd9kxzq5"; depends=[fields RColorBrewer]; }; Trading = derive2 { name="Trading"; version="1.1"; sha256="1mzqck9n14xp16vflx1sx8lry0wjmx37hqv76ldj21xnk5zbrgil"; depends=[]; }; Traitspace = derive2 { name="Traitspace"; version="1.1"; sha256="1wlrpnzb39vgkqy0ynbwlgrkkqgklrk6pw7f8p7p2i132qk2c291"; depends=[mclust permute]; }; - TrajDataMining = derive2 { name="TrajDataMining"; version="0.1.4"; sha256="0lm5ikdl95vr5xdm082n59pznmdx5jd5cxfy1f9r85smhdhw05yk"; depends=[geosphere ggplot2 magrittr rgdal RPostgreSQL sp spacetime trajectories xts]; }; + TrajDataMining = derive2 { name="TrajDataMining"; version="0.1.5"; sha256="0zdni9zqz3yy5ac2xfn3x2ad2lsmm7aw67nshv2sis828f9bsj9x"; depends=[geosphere ggplot2 magrittr rgdal rgeos RPostgreSQL sp spacetime trajectories xts]; }; TransModel = derive2 { name="TransModel"; version="2.1"; sha256="0brlr4w5k8xsgbrizm7ha0cmq0kqzd2fcjpszq7gym844jj93csi"; depends=[MASS survival]; }; TransP = derive2 { name="TransP"; version="0.1"; sha256="0p6pfcp8qjdah0lfhx0a396nxjzp3ckpda9hl3snpppx79iyww55"; depends=[]; }; TransferEntropy = derive2 { name="TransferEntropy"; version="1.4"; sha256="0620axdj6qyskf7xszrs8j5d2l73ns4bgbdg03fvr8i7jmq70zb8"; depends=[BH Rcpp]; }; TreatmentSelection = derive2 { name="TreatmentSelection"; version="2.1.1"; sha256="1pw64hx697jg2f1r2zd8y98g3ivj2gm8fnixcjfn4drsd0xixb4p"; depends=[binom ggplot2 survival]; }; - TreeBUGS = derive2 { name="TreeBUGS"; version="1.1.1"; sha256="1zhxmmks263khrdckp570j6lykfhhlpc6rnhw3rk35a9k89yp90v"; depends=[coda hypergeo MASS Rcpp RcppArmadillo rjags runjags]; }; + TreeBUGS = derive2 { name="TreeBUGS"; version="1.3.0"; sha256="0k1z3c5vlgwwkalf2a35q6qqxg9nhkj9101jiqq408dlkahcl32f"; depends=[coda hypergeo logspline MASS Rcpp RcppArmadillo rjags runjags]; }; TreePar = derive2 { name="TreePar"; version="3.3"; sha256="1sm518b1b4b1p0n5979qzvi2nacxpp3znbg9n75pf2a8z8wy6p4l"; depends=[ape deSolve Matrix subplex TreeSim]; }; TreeSearch = derive2 { name="TreeSearch"; version="0.0.6"; sha256="1v8mczvh2m5mrmhsgpajhmb7bmlplyraa2q08w6nz6fs5g9zg01c"; depends=[ape phangorn]; }; TreeSim = derive2 { name="TreeSim"; version="2.3"; sha256="1y98m2whpx9kssgklw2d6prs6af9vcn8yva1l7lm1l509py1fn6h"; depends=[ape geiger]; }; TreeSimGM = derive2 { name="TreeSimGM"; version="2.3"; sha256="0qwqvmmdn290llz5hmmx2q24jjmd1bxssrslzv31kzi1yq5h6w0b"; depends=[ape TreeSim]; }; TrendInTrend = derive2 { name="TrendInTrend"; version="1.0.2"; sha256="0ymlgalddnfnb55s31bysm68yh823ys0rr5fgiic4a2ipnbfd8qf"; depends=[pROC rms]; }; - TriMatch = derive2 { name="TriMatch"; version="0.9.7"; sha256="06idgh9bwwbwa16hlc2kgm06n9shzm0825f7k65zpz3isq23dp7q"; depends=[ez ggplot2 gridExtra PSAgraphics psych reshape2 scales]; }; + TriMatch = derive2 { name="TriMatch"; version="0.9.9"; sha256="17v8hdm594i9qs5hvrzb1k94wrzvx07479rmvbk4314fim27mabg"; depends=[ez ggplot2 gridExtra PSAgraphics psych randomForest reshape2 scales]; }; TriadSim = derive2 { name="TriadSim"; version="0.1.1"; sha256="0m14k512b7q09zx51v2kxa8q9pk2i179w6ckl6jxj2acc860xw3k"; depends=[doParallel foreach snpStats]; }; TrialSize = derive2 { name="TrialSize"; version="1.3"; sha256="1hikhw2l7d3c7cg4p7zzrgdwhy9g4rv06znpw5mc6kwinyakp75q"; depends=[]; }; + TrioSGL = derive2 { name="TrioSGL"; version="1.1.0"; sha256="0xzyv1vppw0v1xjpf83nnv1sx1xy7197ay6l7dzvr0vllappdam9"; depends=[]; }; TripleR = derive2 { name="TripleR"; version="1.5.3"; sha256="13s1vlmr4sqa2sq2fbcld86bh3g73yb204aawbks11rjblwzvb0h"; depends=[ggplot2 plyr reshape2]; }; - TropFishR = derive2 { name="TropFishR"; version="1.1.4"; sha256="120w48rjszcs9c59vi4my98jdbg08s9lld93j38g7a6gnkv2hg8s"; depends=[beepr doParallel GA GenSA MASS msm propagate reshape2]; }; + TropFishR = derive2 { name="TropFishR"; version="1.2.1"; sha256="17c7v85srx2l5chlz4yj8x6qrnlp9vvm11qkag73ma2x2a365sgn"; depends=[doParallel GA GenSA MASS msm propagate reshape2]; }; TruncatedNormal = derive2 { name="TruncatedNormal"; version="1.0"; sha256="1qj18xcq58xah1niwxgqqzscl7dfgxh2s8fdbzk1vigwwm5xfvij"; depends=[randtoolbox]; }; Tsphere = derive2 { name="Tsphere"; version="1.0"; sha256="0xgxw2hfj40k5s0b54dcmz7savl8wy4midmmgc7lq4pyb8vd58xx"; depends=[glasso rms]; }; - TukeyC = derive2 { name="TukeyC"; version="1.1-5"; sha256="08s9scsd2l6wavc7qqlffjbf89vkd6xpb4iawvbqf7jh8jiyvw17"; depends=[]; }; + TukeyC = derive2 { name="TukeyC"; version="1.3-0"; sha256="1rkd20m9f97n88zlyidipqs6nd6hldw8s4bxiwvrj1ba2lbg09p3"; depends=[doBy]; }; + TukeyRegion = derive2 { name="TukeyRegion"; version="0.1.2"; sha256="03lik9vkah3hjhn0l4ci95v2h4q8mnziq006idipn69l4gmnddxl"; depends=[bfp BH ddalpha MASS Rcpp rgl Rglpk]; }; TunePareto = derive2 { name="TunePareto"; version="2.4"; sha256="0pljl3q5s9yqc4ph70y66ff9ci9w8gwj8jsy8srxqkgqvahc8arf"; depends=[]; }; - TurtleGraphics = derive2 { name="TurtleGraphics"; version="1.0-7"; sha256="17hbp58pdjngwx269n65sd5w7r2s4ygzd0yyxal3qwmwshbvcw96"; depends=[]; }; + TurtleGraphics = derive2 { name="TurtleGraphics"; version="1.0-8"; sha256="0h77pj7rs3lrqi1y2dm1cbrmj13mjpq6y5nw8bcq0s2kbnkfw67l"; depends=[]; }; TwoCop = derive2 { name="TwoCop"; version="1.0"; sha256="1ycxq8vbp68z82r2dfg2wkc9zk3bn33d94xay20g2p55lnzl2ifd"; depends=[]; }; TwoPhaseInd = derive2 { name="TwoPhaseInd"; version="1.1.1"; sha256="0xsqiq4x7vmhif9j8zi1smbchwm4fsbgb10i4vxi0biijybizk9z"; depends=[survival]; }; TwoStepCLogit = derive2 { name="TwoStepCLogit"; version="1.2.5"; sha256="050y7na91izg36gkwd8yn8rx3r39dk6qlvhd3137f3jnk4v00bck"; depends=[survival]; }; @@ -3769,17 +3855,19 @@ in with self; { UWHAM = derive2 { name="UWHAM"; version="1.0"; sha256="1qaj8anaxqnx4nc6vvzda9hhhzqk9qp8q7bxm26qgia4hgascnrv"; depends=[trust]; }; UdderQuarterInfectionData = derive2 { name="UdderQuarterInfectionData"; version="1.0.0"; sha256="084bq5ai1ccp4www64z0ipic74zkd8j1ygv0py900164a25wdr9b"; depends=[]; }; Ultimixt = derive2 { name="Ultimixt"; version="2.1"; sha256="0fh2qpm7qpv1170jzbmzqhvwsn69lblizzisgasswy2nix2jjz4y"; depends=[coda gtools]; }; + Umatrix = derive2 { name="Umatrix"; version="3.1"; sha256="131j7yrb0yzffl6gvirdj29zmsbwg8163i15gg9f0clfcrl1kcx6"; depends=[abind AdaptGauss deldir fields geometry ggplot2 pdist plyr png Rcpp reshape2 shiny shinyjs]; }; Umpire = derive2 { name="Umpire"; version="1.3.4"; sha256="0kxndg96ah6sk1m216f2dmkg73w10lyg3rv7qsrnn145mznsdlw1"; depends=[]; }; UncerIn2 = derive2 { name="UncerIn2"; version="2.0"; sha256="08cg7armz9xwwn1222aws98cwrvmw0s73pxpnszmrmrli1qs92k1"; depends=[automap fields geoR gstat RandomFields Rcpp sp]; }; UncertainInterval = derive2 { name="UncertainInterval"; version="0.3.0"; sha256="09x52g691qqsphy2sppm3852gak0ammsan4x306vd16yz9z0zlb2"; depends=[nloptr reshape2 rootSolve]; }; + UniDOE = derive2 { name="UniDOE"; version="1.0.1"; sha256="1hjraksvxvxz4xbrq97x6xf3r0f90c484ix92zapylyxvkifx628"; depends=[Rcpp]; }; UniIsoRegression = derive2 { name="UniIsoRegression"; version="0.0-0"; sha256="0lmrmb9sbk41ak7sbcrzhfnijb1skgb4lqg9m9imc98lcp69h7z0"; depends=[Rcpp]; }; Unicode = derive2 { name="Unicode"; version="10.0.0-1"; sha256="1kj4b29gj3p0wzlzxqn7lwzabair6np705va0nxissfybpmwalgk"; depends=[]; }; - UnivRNG = derive2 { name="UnivRNG"; version="1.0"; sha256="1d55a103q30vhyjq659a6bbnqbm4g4calr5j4xw8p0h0x5i4p5xh"; depends=[]; }; + UnivRNG = derive2 { name="UnivRNG"; version="1.1"; sha256="0vjsqc1y24z7zlclglh55kkxjhy0dc5gjsy427zdv95j58jbxa66"; depends=[]; }; UpSetR = derive2 { name="UpSetR"; version="1.3.3"; sha256="08vj7l92b8fpqyqwxshll2mhk3yhgyr74axvr2lf29z78bapymhz"; depends=[ggplot2 gridExtra plyr scales]; }; UsingR = derive2 { name="UsingR"; version="2.0-5"; sha256="1w1swcb5srb2b76agbh3mipz8b3vbhpnhxfhg7k546y38j3crafq"; depends=[HistData Hmisc MASS]; }; V8 = derive2 { name="V8"; version="1.5"; sha256="155389k8laa48akg0bfsz65s4ddmpk0xpi1ha56z1sayv01vrrgc"; depends=[curl jsonlite Rcpp]; }; VAR_etp = derive2 { name="VAR.etp"; version="0.7"; sha256="0py5my3ilhcmz44m15hh0d219l9cz7rda4a9gbmf8wh9cgvvj1s3"; depends=[]; }; - VARSEDIG = derive2 { name="VARSEDIG"; version="1.4"; sha256="1g0qpa21gkp2s0sr336bkdqfrcxygrdl77i3lv09vqimyinbi0p2"; depends=[]; }; + VARSEDIG = derive2 { name="VARSEDIG"; version="1.5"; sha256="07zc1k3h9bh0vlqmxqgpniq8ccsfv99bp18h9x9gjl24dppc0xz7"; depends=[]; }; VARsignR = derive2 { name="VARsignR"; version="0.1.3"; sha256="09mnf9hvsi4wx1c81yq97mzggwk6s7nka7awrws63icjybqjmra9"; depends=[HI minqa mvnfast]; }; VARtests = derive2 { name="VARtests"; version="1.0.1"; sha256="19xmf4mg4v1fwd002ccinfbsbpcq9qfmzc2sf710mqv6i8ghv6jm"; depends=[Rcpp RcppArmadillo sn]; }; VBLPCM = derive2 { name="VBLPCM"; version="2.4.4"; sha256="09b80313w2dljl009xzcfhdcl6flc8nqzw9pzgfbciwi61666ppb"; depends=[ergm mclust network sna]; }; @@ -3788,7 +3876,7 @@ in with self; { VDA = derive2 { name="VDA"; version="1.3"; sha256="063mpwbyykx4f46wzfvrgnlq73ar7i06gxr4mjzbhqcfrsybi72b"; depends=[rgl]; }; VDAP = derive2 { name="VDAP"; version="2.0.0"; sha256="134x4aisaim72xkyzb1vb8vhl2m4i12yzh6cj858a1ag7b0ing3n"; depends=[drc ggplot2 reshape2 stringr]; }; VDSPCalibration = derive2 { name="VDSPCalibration"; version="1.0"; sha256="1hrmmhvk3mhd3bdl0msnm5shcj4cjgd3pn1rkfkv8fh4llqvz7w8"; depends=[]; }; - VGAM = derive2 { name="VGAM"; version="1.0-4"; sha256="0r59hyp3afmvms890b3v2yyckf8v0qkjf2w11rnqd2zgg1gri0g5"; depends=[]; }; + VGAM = derive2 { name="VGAM"; version="1.0-5"; sha256="0ik3wyv6jj54bg34z0fzzk4xg0h6x98jqx4q2r7g1f0in0qgbb01"; depends=[]; }; VGAMdata = derive2 { name="VGAMdata"; version="1.0-3"; sha256="1jicadjaqmys1bbgkp64hmm8wwmi6f734il00v8qjz3jl9b02pkn"; depends=[]; }; VHDClassification = derive2 { name="VHDClassification"; version="0.3"; sha256="1ij4h3gzxb9mm9q743kc3sg2q609mnqz6mhlrbim1wcjji2b7bv4"; depends=[e1071 lattice]; }; VIF = derive2 { name="VIF"; version="1.0"; sha256="0yvg6ikrcs7mhg0pavhcywrfysv7ylvnhxpc5sam86dbp69flx9x"; depends=[]; }; @@ -3798,12 +3886,12 @@ in with self; { VIMGUI = derive2 { name="VIMGUI"; version="0.10.0"; sha256="14na9ss0vkcys979kdcciynwssqsvy2w566nydgzd3n7gcmx2agm"; depends=[Cairo foreign gWidgets gWidgetsRGtk2 Hmisc RGtk2 survey tkrplot VIM]; }; VLF = derive2 { name="VLF"; version="1.0"; sha256="1il8zhm80mc22zj16dpsy4s6s9arj21l9ik0vccyrpnlr8ws3d3l"; depends=[]; }; VLMC = derive2 { name="VLMC"; version="1.4-1"; sha256="0y91cl9pv1d5s8956grdx3y4xa5l1fabrh1wl5hn11fjgyz1dcij"; depends=[MASS]; }; - VNM = derive2 { name="VNM"; version="5.1"; sha256="132m23np3qk4cf2fnsjg0ykcifqs20psavybmzs5b86qp9m77h9h"; depends=[Rcpp]; }; + VNM = derive2 { name="VNM"; version="6.1"; sha256="195fcgs6rzpji250j5kikim4k2rfg1gqgz65f2vgfbmz76wi4za6"; depends=[Rcpp]; }; VRPM = derive2 { name="VRPM"; version="1.2"; sha256="1cai5a71vzkx0d7cwzsxbcz7r9cdkqjk4l4bp2ffj5pp7nrlh15r"; depends=[fields ggplot2 Hmisc kernlab R2HTML ROCR shiny survival viridis]; }; VSE = derive2 { name="VSE"; version="0.99"; sha256="07m5080nw72b77238v2wwdh4dxsvv6y78d4j1329n90wyj2crxl4"; depends=[car GenomicRanges igraph IRanges]; }; VSURF = derive2 { name="VSURF"; version="1.0.3"; sha256="0fgy1qk1jkrnil4cirkp2lj21xjwbpgjgxqrsjs321s69rw2dy1j"; depends=[doParallel foreach randomForest rpart]; }; VTrack = derive2 { name="VTrack"; version="1.11"; sha256="1w8zp7l60mwzppg3gqq0zv5a065y0vdrp2v0x0yl4a8jq0zlvppx"; depends=[doParallel foreach plotKML sp spacetime]; }; - VWPre = derive2 { name="VWPre"; version="1.0.0"; sha256="1gxi26wga15xw2zcdmhii0cw6q6iz8nsbzmyd4x7aa14ab5zpv3l"; depends=[dplyr ggplot2 mgcv rlang shiny tidyr]; }; + VWPre = derive2 { name="VWPre"; version="1.0.1"; sha256="1q6i1ijw9sx5k9k1gpmhsm99hwgsj6kjkak3lnq7458563vd640m"; depends=[dplyr ggplot2 mgcv rlang shiny tidyr]; }; VaRES = derive2 { name="VaRES"; version="1.0"; sha256="0gw05jiqgirhz3c8skbb07y4h44r6vi68gnd5y7ql455v0c2raza"; depends=[]; }; VarED = derive2 { name="VarED"; version="1.0.0"; sha256="16j9p2a143y4hqclsv1mig0fccrzjx2r0lll0wz8isjp9x1wzjv8"; depends=[]; }; VarReg = derive2 { name="VarReg"; version="1.0.1"; sha256="00ygs9gk2719fnhb47z1pj7qacapzg9qs1li2206vsfrmqxjvj1a"; depends=[sn survival]; }; @@ -3820,11 +3908,11 @@ in with self; { VennDiagram = derive2 { name="VennDiagram"; version="1.6.18"; sha256="05vhsk5ylspa6b919gk9v4rbwm9sc4lsfq0wz308a8dilkg8cqpa"; depends=[futile_logger]; }; VertexSimilarity = derive2 { name="VertexSimilarity"; version="0.1"; sha256="0f638y272dbmz5747wxqy9pxasxk3a9f9wf31gf297qx7268ab1m"; depends=[igraph]; }; VertexSort = derive2 { name="VertexSort"; version="0.1-1"; sha256="0n9m5l85ylin6756rsksak94nv0626qd7czhhj6plz4nfrr27sgl"; depends=[igraph snowfall]; }; - VeryLargeIntegers = derive2 { name="VeryLargeIntegers"; version="0.1.4"; sha256="10pscsii040avb98zqcd0x3camhfgf2r549b2f8asgqaksypx976"; depends=[Rcpp]; }; + VeryLargeIntegers = derive2 { name="VeryLargeIntegers"; version="0.1.5"; sha256="18v5llajhfp9nrmyzg6n2mgm7vbjk698m4y55x9xrq29hkb4mhad"; depends=[Rcpp]; }; VetResearchLMM = derive2 { name="VetResearchLMM"; version="0.2.0"; sha256="1vx72pn3fl27mjsa48kz5j1sj1bkjq8q0ifs5dxdfrcdswfqhjcw"; depends=[ggplot2 lme4 lmerTest multcomp nlme]; }; ViSiElse = derive2 { name="ViSiElse"; version="1.2.0"; sha256="0k5hhzyjws0haawx2r2c0rxjbjdfx821x0jmj88786q6x67x86n0"; depends=[chron colorspace Matrix stringr]; }; VideoComparison = derive2 { name="VideoComparison"; version="0.15"; sha256="0592fz0v4xvq1qy2hj4ph90v7zn1cnzr6a094mp9p1k61ki3fbg2"; depends=[pracma Rcpp RCurl RJSONIO zoo]; }; - VineCopula = derive2 { name="VineCopula"; version="2.1.3"; sha256="1v15fq4wgqcxwkqzk1wyfsmlrslshlp0faxmnfajis7a59cwlwgp"; depends=[ADGofTest copula doParallel foreach kdecopula lattice MASS mvtnorm network]; }; + VineCopula = derive2 { name="VineCopula"; version="2.1.4"; sha256="1mzxq3ci4z24z8d5w9x1n0d5h7ck7wbcx9y38vlaryyi5ipbhadh"; depends=[ADGofTest copula doParallel foreach kdecopula lattice MASS mvtnorm network]; }; VisuClust = derive2 { name="VisuClust"; version="1.2"; sha256="0hnjmrz352950rzky88q4nwvkx7zp6x3lsm7kff5dl4w05iq4wsl"; depends=[aplpack]; }; VizOR = derive2 { name="VizOR"; version="0.8-5"; sha256="1v76m67xdlg06w3dmp27mh3mv3lfqy6bd1iq907dynp2g4qf4ww0"; depends=[lattice rms]; }; Voss = derive2 { name="Voss"; version="0.1-4"; sha256="056izh1j26vqjhjh01fr7nwiz1l6vwr5z4fll87w99nc5wc4a467"; depends=[fields]; }; @@ -3832,22 +3920,23 @@ in with self; { W2CWM2C = derive2 { name="W2CWM2C"; version="2.0"; sha256="139rbbhshiap3iq4s4n84sip3cwwjn2x7lm7kmzwj5glhl5dc6ga"; depends=[colorspace wavemulcor waveslim]; }; W3CMarkupValidator = derive2 { name="W3CMarkupValidator"; version="0.1-6"; sha256="0nfay5nqss3zlw4nikj8h3zzlnjfxjch4pm3qky15qrcigrybrbl"; depends=[curl xml2]; }; WACS = derive2 { name="WACS"; version="1.0"; sha256="1x6vn7xhrnaggrxkvap6si8gz7b6z2zpjpbb9zgag4vyq3s7nxgy"; depends=[mclust mnormt mvtnorm tmvtnorm]; }; - WARN = derive2 { name="WARN"; version="1.2-2"; sha256="1kp0p9ax6k4y990j95q70dhd1r37hjw3i583c2f6ds8gpddqdi3v"; depends=[MASS]; }; + WARN = derive2 { name="WARN"; version="1.2-3"; sha256="0vkp70cc3slz9y8qfybrqyjyglsxz9fnqrid735h2a113h4xvr3v"; depends=[MASS]; }; WCE = derive2 { name="WCE"; version="1.0"; sha256="1kb1z67ymnz8cgwxq6m5fpqgxmmrfiwh2q3x4rhanac2sinagyn4"; depends=[plyr survival]; }; WCQ = derive2 { name="WCQ"; version="0.2"; sha256="1yhkr2iazd7lh9r68xz1lh32z6r1sdnmqrjshcrm4rbwai0j3lkr"; depends=[]; }; WDI = derive2 { name="WDI"; version="2.4"; sha256="0ih6d9znq6b2prb4nvq5ypyjv1kpi1vylm3zvmkdjvx95z1qsinf"; depends=[RJSONIO]; }; WEE = derive2 { name="WEE"; version="1.0"; sha256="0i3h67p72lr708mwdw3rbzr1lqqr8n2dxv7f0bwyqzxv41sx1iz3"; depends=[doParallel foreach quantreg]; }; - WGCNA = derive2 { name="WGCNA"; version="1.61"; sha256="1vrc2k33a196hrrl7k0z534fp96vv0shmigcr65ny1q0v6lq0h6i"; depends=[AnnotationDbi doParallel dynamicTreeCut fastcluster foreach GO_db Hmisc impute matrixStats preprocessCore Rcpp robust survival]; }; + WGCNA = derive2 { name="WGCNA"; version="1.62"; sha256="0c52rp09gqphz6g5x9jzkdcsyvfrknq0dkq9saslgy8q8ap974vx"; depends=[AnnotationDbi doParallel dynamicTreeCut fastcluster foreach GO_db Hmisc impute matrixStats preprocessCore Rcpp robust survival]; }; WHO = derive2 { name="WHO"; version="0.2"; sha256="0rpk7ddpkjcqs0m7cgxs55k178js0d70ccfximp2vqrsw0igkmk9"; depends=[dplyr httr]; }; WLreg = derive2 { name="WLreg"; version="1.0.0"; sha256="0paghjcshhrr6y1gm98d6gr78zvgzhl678g9f96hppfa4q3lfpr7"; depends=[inline survival]; }; WMCapacity = derive2 { name="WMCapacity"; version="0.9.6.7"; sha256="167wx759xi7rv74n6sdsdkjnfpxdsiybk4ik70psdgfwdqqcga1y"; depends=[cairoDevice coda gtools gWidgets gWidgetsRGtk2 RGtk2 XML]; }; WMDB = derive2 { name="WMDB"; version="1.0"; sha256="10wdjy3g2qg975yf1dhy09w9b8rs3w6iszhbzqx9igfqvi8isrr1"; depends=[]; }; + WMWssp = derive2 { name="WMWssp"; version="0.3.2"; sha256="019fcmf5zmbm20zyvx96nwp66lqm2xw7hbpacfwn8cvw3dq85chr"; depends=[rankFD]; }; WPC = derive2 { name="WPC"; version="1.0"; sha256="0li502hwa4n945yfnilslyvl12ls66kazbfmxb4kkjbaf500mjp9"; depends=[msm survival]; }; WPKDE = derive2 { name="WPKDE"; version="0.1"; sha256="100vla11fbw16x5n4w4kbslz4n725v4x6j0hrxzrk99ryl0crmf6"; depends=[]; }; WRS2 = derive2 { name="WRS2"; version="0.9-2"; sha256="0szjq9ffckjqa128avs4cymqvxk7dhldzj620kcq7q59aagrnj04"; depends=[MASS mc2d plyr reshape]; }; - WRSS = derive2 { name="WRSS"; version="1.0"; sha256="0v0ar1vylf6nz3k9yq867ych2zbx9q51q9w2i6i776davdgya887"; depends=[Hmisc]; }; + WRSS = derive2 { name="WRSS"; version="1.1"; sha256="1iv6msack3ha2i8l4c7p9964b9f3c2qza1yxjsyx9sn1wzfxs6fj"; depends=[Hmisc]; }; WRTDStidal = derive2 { name="WRTDStidal"; version="1.1.0"; sha256="0yyhls0qzwwj4sz5d1nvzfiacx28dmf2hgjc7xgfi2qjkckg40hs"; depends=[caret dplyr EnvStats fields foreach forecast ggplot2 gridExtra lubridate purrr quantreg RColorBrewer survival tidyr]; }; - WVPlots = derive2 { name="WVPlots"; version="0.2.7"; sha256="1nca5zbn5ipwqpxxrzgnx588rs7xz3l3zk50v8ss0s90fvnggfjq"; depends=[cdata ggplot2 gridExtra mgcv plotly replyr seplyr sigr wrapr]; }; + WVPlots = derive2 { name="WVPlots"; version="0.2.8"; sha256="1d9016k05s3v3gmxsig6xk87npmgni9mfyqcwcvd522zisfx2g6z"; depends=[cdata ggplot2 gridExtra mgcv plotly replyr seplyr sigr wrapr]; }; WWGbook = derive2 { name="WWGbook"; version="1.0.1"; sha256="0q8lnd1fp4rmz715x0lf61py3xw8wg55yq3gvswaqwy68dlqrzjc"; depends=[]; }; WWR = derive2 { name="WWR"; version="1.2.2"; sha256="0ia1dd12r1l08s9nhgvk55jmqwv58jawm25gd2ni6wpa3mcmq02g"; depends=[inline]; }; WaterML = derive2 { name="WaterML"; version="1.7.1"; sha256="0aqcanq2l3m9w1kglmkbqshs80wx9inmjp0c1i2j901g4k35ss5j"; depends=[httr RJSONIO XML]; }; @@ -3858,13 +3947,11 @@ in with self; { WaveletComp = derive2 { name="WaveletComp"; version="1.0"; sha256="16ghxqjbv39pmgd52im6ilkkh0hpnaw8ns0hwkngpbr479m1grdp"; depends=[]; }; WaverR = derive2 { name="WaverR"; version="1.0"; sha256="084fhzggzm075w6wp2lqd3j0an21idhw8z5l8ynz4y96mpmn204a"; depends=[kimisc MASS]; }; WebGestaltR = derive2 { name="WebGestaltR"; version="0.1.1"; sha256="0cdpfwp4whx8pff73acxga072lwbibl44hxdjs9jsb5i21h55vbr"; depends=[data_table doParallel foreach pkgmaker PythonInR rjson]; }; - WeightIt = derive2 { name="WeightIt"; version="0.2.0"; sha256="0v0pjp5br8klrf8gafzj7p35wd3cpxw6g46yhl1k9mhlfh9h8s2y"; depends=[cobalt]; }; Weighted_Desc_Stat = derive2 { name="Weighted.Desc.Stat"; version="1.0"; sha256="030i12mnwlj976avvk3grrccgprsckmc35dm2ajwdfc9dijhypnj"; depends=[]; }; WeightedCluster = derive2 { name="WeightedCluster"; version="1.2-1"; sha256="04gsr65mssv4cz4v8sh44qhyzn0isll057d45z4ljv6sx0an5yhl"; depends=[cluster RColorBrewer TraMineR]; }; WeightedPortTest = derive2 { name="WeightedPortTest"; version="1.0"; sha256="007v3w9ssiv2sds7sikpal27g6pxwxhs7bvcyw6kr0vg8gvlbi8h"; depends=[]; }; - WeightedROC = derive2 { name="WeightedROC"; version="2017.07.12"; sha256="1s9ic2nv4xd3j9xhan46fv9a14n70v0skw9q70rix6kaydi6cjf9"; depends=[]; }; WhatIf = derive2 { name="WhatIf"; version="1.5-9"; sha256="0ihpp3wbhpsg00g0s31l0ca4q0a2sch2a2j8cgz14g8na43x8831"; depends=[lpSolve pbmcapply Zelig]; }; - WhiteStripe = derive2 { name="WhiteStripe"; version="2.2.2"; sha256="0jaxy5a4m4ir25assi2dsdgfcm88lbgjdghsh36v7zvhblrfcfap"; depends=[mgcv oro_nifti]; }; + WhiteStripe = derive2 { name="WhiteStripe"; version="2.3.0"; sha256="10rnfwq3f6msrzmgifm33dqwnncfhybiah8czh1z7g3iw2859qbc"; depends=[mgcv oro_nifti]; }; WhopGenome = derive2 { name="WhopGenome"; version="0.9.7"; sha256="1xa7d9x5ny8g79scfkv7v5ix9m3mfzg0fks2bsan9zqyhcd01fsq"; depends=[]; }; WiSEBoot = derive2 { name="WiSEBoot"; version="1.4.0"; sha256="1fch78884ay7m2gy602k8df78gkvjiwzkjk550w0k4xbv430ld0h"; depends=[FAdist wavethresh]; }; WikiSocio = derive2 { name="WikiSocio"; version="0.7.0"; sha256="1rc90cidc8mj8x7vw82vx41ivwnmil3cmc1whc8ghxrwli256w32"; depends=[httr igraph pbapply plyr RCurl stringr XML]; }; @@ -3873,7 +3960,7 @@ in with self; { WikipediR = derive2 { name="WikipediR"; version="1.5.0"; sha256="1w4ggq42vlq7zbrz3v9ripz9yscbd8m8as60q7cplpxn9zqfdl7q"; depends=[httr jsonlite]; }; WikipediaR = derive2 { name="WikipediaR"; version="1.1"; sha256="0fxk247jb82g0f3nmwraa4kvdpjxy5s4dcyzj9vkjw2lq8by3l0h"; depends=[httr XML]; }; WilcoxCV = derive2 { name="WilcoxCV"; version="1.0-2"; sha256="1kbb7ikgnlxybmvqrbn4cd8xnqrkwipk4xd6yja1xsi39a109xzl"; depends=[]; }; - Wmisc = derive2 { name="Wmisc"; version="0.3.3"; sha256="1yr3754440d53xbhs4ynhaqymqqpsacri7as6f9sicx1qk1cwalg"; depends=[hash R6 Rcpp]; }; + WindCurves = derive2 { name="WindCurves"; version="0.1.3"; sha256="0bvbnrkdk0g0radgcw4zbhq6czpvq3f7f34x83qk09i8ngmwd28c"; depends=[drc imputeTestbench readbitmap]; }; WordPools = derive2 { name="WordPools"; version="1.0-2"; sha256="1izs4cymf2xy1lax85rvsgsgi05ygf0ibi9gzxc96sbgvy4m78kf"; depends=[]; }; WordR = derive2 { name="WordR"; version="0.2.2"; sha256="1q8im3v30xil5qg4m1hypmj439rsx5g2x4mfxsgkz4xz2hwlfh4f"; depends=[dplyr officer ReporteRs]; }; Wrapped = derive2 { name="Wrapped"; version="2.0"; sha256="1z5kypsd39z9arsw57axckvl8b4jnr5wv60s9z58f5s89gn5vxxg"; depends=[AdequacyModel ald cubfits evd fBasics gamlss_dist GeneralizedHyperbolic GEVStableGarch glogis irtProb LCA lqmm metRology NormalLaplace normalp ordinal sgt SkewHyperbolic sld sn VarianceGamma VGAM]; }; @@ -3881,12 +3968,12 @@ in with self; { WriteXLS = derive2 { name="WriteXLS"; version="4.0.0"; sha256="0nwxi36w3rkzw9j0qil64gakhb101rxg1wydjkwlpg0nbsj1sm50"; depends=[]; }; WufooR = derive2 { name="WufooR"; version="0.6.2"; sha256="1k5nmg8mg8m9salcb0jr87ws548ydc597v8m94y4qrrfchy623rg"; depends=[dplyr httr jsonlite]; }; XBRL = derive2 { name="XBRL"; version="0.99.18"; sha256="1bwvxqbxdf1ynz2bv27l86h05h8y19q2li2y79xk819p5nkxq341"; depends=[Rcpp]; }; - XGR = derive2 { name="XGR"; version="1.0.10"; sha256="19fgjg7cd6ax4iiwkp0r4ssr6ygfg16s3i62vr3y63an6ykmg206"; depends=[BiocGenerics dnet GenomicRanges ggplot2 igraph IRanges Matrix plot3D RCircos rtracklayer S4Vectors supraHex]; }; + XGR = derive2 { name="XGR"; version="1.1.1"; sha256="1m1nr8ass1spkxf5rc1hj53f98xhad4l2xafjim0284q0l01qn2r"; depends=[BiocGenerics dnet dplyr GenomicRanges GenomicScores ggnetwork ggplot2 ggrepel igraph IRanges Matrix plot3D RCircos rtracklayer S4Vectors supraHex tidyr XML]; }; XHWE = derive2 { name="XHWE"; version="1.0"; sha256="1ca8y9q3623d0vn91g62nrqf3pkbcbkpclmddw5byd37sdrgsi5l"; depends=[]; }; XKCDdata = derive2 { name="XKCDdata"; version="0.1.0"; sha256="1lx9frlbc549qrh4d3m79r3l9icfzqkgfgp8raa8x46a2havi0a5"; depends=[assertthat dplyr glue htmltools httr jsonlite magrittr tibble]; }; - XLConnect = derive2 { name="XLConnect"; version="0.2-13"; sha256="1a6a156m1cinscvhnh27di1z8fckrqf876clzg96zrx0h01q2sfz"; depends=[rJava XLConnectJars]; }; - XLConnectJars = derive2 { name="XLConnectJars"; version="0.2-13"; sha256="1g2ld0r6mjz9fmy1ijhj7x2sxw562yzrnwsryj3a4qj2fmy61g48"; depends=[rJava]; }; - XML = derive2 { name="XML"; version="3.98-1.9"; sha256="1hzkdkgs0nzmfg9wm7kyh1j9i0i2g7925whzlihqvg9grdlh3dx3"; depends=[]; }; + XLConnect = derive2 { name="XLConnect"; version="0.2-14"; sha256="06c88rkyavjv3p90hr3cz4y9jx3g6ik3sannjynjnms7d793w0fi"; depends=[rJava XLConnectJars]; }; + XLConnectJars = derive2 { name="XLConnectJars"; version="0.2-14"; sha256="0ckkvm8i2r60npx0zb36h98gmzgqig9d806cn6r5cghczz6g0xf6"; depends=[rJava]; }; + XML = derive2 { name="XML"; version="3.98-1.10"; sha256="1faza9bbllp67lf1yv1sllxc3iv8llz52m9diazhq322iqbh97m1"; depends=[]; }; XML2R = derive2 { name="XML2R"; version="0.0.6"; sha256="0azfh950r2b7ck3n1vzk3mdll7zy844nx3mbk676jxnj8gg7nxk5"; depends=[plyr RCurl XML]; }; XMRF = derive2 { name="XMRF"; version="1.0"; sha256="0jnyy9pcksfadznidqsbwh8nlqv3k0yppj76q8a2g0aidbdmg2cc"; depends=[glmnet igraph MASS Matrix snowfall]; }; XNomial = derive2 { name="XNomial"; version="1.0.4"; sha256="1mwx302576rmsjllbq2clfxilm3hkyp5bw0wmwqbn0kgv5wpy8z6"; depends=[]; }; @@ -3894,9 +3981,9 @@ in with self; { XRJulia = derive2 { name="XRJulia"; version="0.7.6"; sha256="1bvkrx4nvni858qw3p51bm2pidlfqdmk2pbmhwmb61pcbls3gpk8"; depends=[XR]; }; XRPython = derive2 { name="XRPython"; version="0.8"; sha256="0alg33spiaqf3jwg1qn543nxvbfaqv8gvf5px3grhbgrcmi5mcmj"; depends=[reticulate XR]; }; XRSCC = derive2 { name="XRSCC"; version="0.1"; sha256="0hs2whjsd02avaz79zkrd8gjw9qd7l6ysxmhx4w1r7gb1cj9rr7c"; depends=[]; }; - XiMpLe = derive2 { name="XiMpLe"; version="0.10-1"; sha256="10163snplpw4r4902w2ws60m6wr1icnniv7y0vy7y1nq2c0i0is5"; depends=[]; }; + XiMpLe = derive2 { name="XiMpLe"; version="0.10-2"; sha256="16dmslc3ji9zbbm2khw8ib8rhwan0mdlfyd4h29v42lcx6l1d0pv"; depends=[]; }; Xmisc = derive2 { name="Xmisc"; version="0.2.1"; sha256="11gwlcyxhz1p50m68cnqrxmisdk99v8vrsbvyr7k67f0kvsznzs1"; depends=[]; }; - Xplortext = derive2 { name="Xplortext"; version="1.1.0"; sha256="06jp3dpwslvvjzvakaiy7ra7hd87fp997xwkjq992i41lc6ymwcz"; depends=[FactoMineR ggplot2 gridExtra slam stringr tm]; }; + Xplortext = derive2 { name="Xplortext"; version="1.1.1"; sha256="18a8qqpakwgv60gm89cmil18q35mlir3xl4yl5j5fswcj5qpdkdx"; depends=[FactoMineR ggplot2 gridExtra slam stringr tm]; }; YPInterimTesting = derive2 { name="YPInterimTesting"; version="0.1.0"; sha256="0jfvj08acldigd9q25dv2cqyp5a5wjzcb5wa0640y4kc5ga8p08s"; depends=[Rcpp]; }; YPmodel = derive2 { name="YPmodel"; version="1.3"; sha256="1vll33nm7xynnbq15wksk9c38jhjfd6l1bbzijn5skqc5yik1r5x"; depends=[]; }; YaleToolkit = derive2 { name="YaleToolkit"; version="4.2.2"; sha256="12wggdyz0wgnmxnqhp8bypyy1x1p50g49fwdzl2l43il44cdyv0g"; depends=[foreach iterators]; }; @@ -3905,13 +3992,14 @@ in with self; { YuGene = derive2 { name="YuGene"; version="1.1.5"; sha256="1f1bia1q1z2rzp4pw218zglf02x1m9zpz5gqllrd77ggw8ilqfjc"; depends=[mixOmics]; }; ZIBseq = derive2 { name="ZIBseq"; version="1.2"; sha256="13rjy4jl9wil6hhpra4qmdis0iyqxchzsf9l7q6r0dz1f7dpd2nq"; depends=[gamlss gamlss_dist nlme]; }; ZIM = derive2 { name="ZIM"; version="1.0.3"; sha256="1497ki0pr0x21fz5wa2z6zgb2br99z56gvfxyn9cglqq45if6cjh"; depends=[MASS]; }; + ZOIP = derive2 { name="ZOIP"; version="0.1"; sha256="0fraxzr2mfd7w705j2fryhh9vpg6nkag6kmk7p7in3zknxwipfh3"; depends=[boot GHQp numDeriv rmutil]; }; ZRA = derive2 { name="ZRA"; version="0.2"; sha256="1sx1q5yf68hhlb5j1hicpj594rmgajqr25llg7ax416j0m2rnagi"; depends=[dygraphs forecast]; }; ZeBook = derive2 { name="ZeBook"; version="0.5"; sha256="1djwda6hzx6kpf4dbmw0fkfq39fqh80aa3q9c6p41qxzcpim27dw"; depends=[deSolve triangle]; }; Zelig = derive2 { name="Zelig"; version="5.1.5"; sha256="0lzcin7maz4drn9w3z841kay4ik6rr4ab2l2s56mcj1f0p6ng7pd"; depends=[AER Amelia coda dplyr Formula geepack jsonlite MASS MatchIt maxLik MCMCpack quantreg sandwich survey survival VGAM]; }; ZeligChoice = derive2 { name="ZeligChoice"; version="0.9-6"; sha256="1whfwc42lsi54xfr423h6jwbvpj6yjyyf0854k1f1ms13liahm8w"; depends=[dplyr Formula jsonlite MASS VGAM Zelig]; }; ZeligEI = derive2 { name="ZeligEI"; version="0.1-2"; sha256="0kilzfqmm6a41mmjvlynh3rnj30fqiq8gsja28fzwpf0lbl89slg"; depends=[dplyr ei eiPack Formula jsonlite MASS MCMCpack Zelig]; }; ZillowR = derive2 { name="ZillowR"; version="0.1.0"; sha256="1wrr58p76ps29fqzzwgfvfibxrvc72p2yzs5kc2rv1yxzzcpyxvb"; depends=[RCurl XML]; }; - Zseq = derive2 { name="Zseq"; version="0.1.1"; sha256="0wz2vrnx499597zyx5vbg12k6zdhs466g03nbzsr1j3xaf33k394"; depends=[Rmpfr]; }; + Zseq = derive2 { name="Zseq"; version="0.2.0"; sha256="06dndi2b1q79bmxax11bv0l5ifcz1mhpvbn90y6a6xymrgcq0ivi"; depends=[gmp]; }; aCRM = derive2 { name="aCRM"; version="0.1.1"; sha256="0kzp568hd9c9a9qgniia5s5gv0q5f89xfvvwpzb197gqhs3x092v"; depends=[ada dummies kernelFactory randomForest]; }; aLFQ = derive2 { name="aLFQ"; version="1.3.4"; sha256="1q2l5cwkcsng22nxckgc7aalvy3qhvgga5nkchfpy53sxg68awqv"; depends=[bio3d caret data_table lattice plyr protiq randomForest reshape2 ROCR seqinr]; }; aRpsDCA = derive2 { name="aRpsDCA"; version="1.1.1"; sha256="0ghg43rd6bnv4jp8pkpd1ixp5l6kq5pr0mxq61q24s24g0m3s64p"; depends=[]; }; @@ -3919,7 +4007,7 @@ in with self; { aSPC = derive2 { name="aSPC"; version="0.1.2"; sha256="1q301rw7dax5v58srg4jlcam1qq2igkaj7kg8wlnlml0hsck4c4a"; depends=[energy mvtnorm]; }; aSPU = derive2 { name="aSPU"; version="1.48"; sha256="0kjvwwvyhiz9i5kxqg68lq6cvxnk9vzvp5zca5hfv2g77j42wh9h"; depends=[fields gee MASS matrixStats mvtnorm]; }; aTSA = derive2 { name="aTSA"; version="3.1.2"; sha256="1p3spas0sxj08hkb8p6k2fy64w86prlw1hbnrqnrklr0hnkg2g54"; depends=[]; }; - aVirtualTwins = derive2 { name="aVirtualTwins"; version="1.0.0"; sha256="193289dm3nvmkx0dmclm1isz62jvvmhynnm1w1964v5nz2jc8vzd"; depends=[party randomForest rpart]; }; + aVirtualTwins = derive2 { name="aVirtualTwins"; version="1.0.1"; sha256="1jg19ns3mxfycc11i2c152d83n4kqz3dd6d269sijnxrw80kzjki"; depends=[party randomForest rpart]; }; abbyyR = derive2 { name="abbyyR"; version="0.5.1"; sha256="1s8zf18sh0s89vk3dl09fzrq50csmmfvmsanf5vfkv9n5lx6pklg"; depends=[curl httr plyr progress readr XML]; }; abc = derive2 { name="abc"; version="2.1"; sha256="0ngzaaz2y2s03fhngvwipmy4kq38xrmyddaz6a6l858rxvadrlhb"; depends=[abc_data locfit MASS nnet quantreg]; }; abc_data = derive2 { name="abc.data"; version="1.0"; sha256="1bv1n68ah714ws58cf285n2s2v5vn7382lfjca4jxph57lyg8hmj"; depends=[]; }; @@ -3930,7 +4018,7 @@ in with self; { abe = derive2 { name="abe"; version="3.0.1"; sha256="1f19h3xzzmjhvwc1rrb8z0rai3ip03y4gdi2gg9bfr5sg2nfklk6"; depends=[]; }; abf2 = derive2 { name="abf2"; version="0.7-1"; sha256="0d65mc1w4pbiv7xaqzdlw1bfsxf25587rv597hh41vs0j0zlfpxx"; depends=[]; }; abind = derive2 { name="abind"; version="1.4-5"; sha256="0b1zd8jbnl6l292cr9rb50m09fy3ylxvzkpgi5lfb1nbzddcwfis"; depends=[]; }; - abjutils = derive2 { name="abjutils"; version="0.0.1"; sha256="0bgk522jxj31crzg3pa4pghz1sjx6gr3jchh9cwqdslr9ydd0g0j"; depends=[devtools dplyr httr magrittr stringr tibble]; }; + abjutils = derive2 { name="abjutils"; version="0.2.1"; sha256="0qrsc4if7aif73qp95lw6b5986c2r0jn7m39123zij8k15vc935b"; depends=[devtools dplyr glue httr magrittr plyr progress purrr rstudioapi scales stringi stringr tibble tidyr]; }; abn = derive2 { name="abn"; version="1.0.2"; sha256="0jxpw5mplnpc57jjg9w3zrik40g7va6s8m9zbfsyf0vqn645wfwq"; depends=[Cairo]; }; abodOutlier = derive2 { name="abodOutlier"; version="0.1"; sha256="1pvhgxmh23br84r0fbmv7g53z2427birdja96a67vqgz18r3fdvj"; depends=[cluster]; }; abundant = derive2 { name="abundant"; version="1.1"; sha256="1m76qdmqvwpgm0sihazi2dna7cgsz9rljal18vgffb5wamwmg9k7"; depends=[QUIC]; }; @@ -3955,13 +4043,12 @@ in with self; { activity = derive2 { name="activity"; version="1.1"; sha256="1lqajgxfps2h6amz1791vp3f52rs9ghmanq1nqfxqd2jmk3idkrx"; depends=[circular overlap pbapply]; }; activpalProcessing = derive2 { name="activpalProcessing"; version="1.0.2"; sha256="1y0bjx2qx53iy930y9iww4q1yzjj8y16cwgixk1mq3w4g1f116d1"; depends=[chron]; }; actogrammr = derive2 { name="actogrammr"; version="0.2.3"; sha256="1jzvarmd41yqlrkagzlc8m19n5mn0w0b36fy50lyvgrfsafjfbqa"; depends=[dplyr ggplot2 lubridate readr tidyr]; }; - actuar = derive2 { name="actuar"; version="2.1-1"; sha256="0d390sygdcy67ww4wdxxfybars7jqpwbc12pvyv01hdqzhzqp04z"; depends=[expint]; }; + actuar = derive2 { name="actuar"; version="2.3-0"; sha256="0qzzsc9s25l29fi1xgd5ypb4j1l08ghx180n0q5k9p2fn36zjz27"; depends=[expint]; }; ada = derive2 { name="ada"; version="2.0-5"; sha256="1h3a07czp0w3hrhjcg1fz721y8vsfclzqi3rq8qfzgpfb4h1f06r"; depends=[rpart]; }; - adabag = derive2 { name="adabag"; version="4.1"; sha256="0a6hwcr0fg0a99y91i3wxrk6k0f7ldwvz9jr3akmiprc28v8r4zz"; depends=[caret mlbench rpart]; }; + adabag = derive2 { name="adabag"; version="4.2"; sha256="109wrl1pwvmyv2l909hrvk7dg4aa9pv449mvdycp50zwrsw9w0a7"; depends=[caret doParallel foreach rpart]; }; adagio = derive2 { name="adagio"; version="0.6.5"; sha256="0jy8g5604alaqbi5ynj95ig07igzbgk8x03a4x1rzkvfwvydfflz"; depends=[]; }; - adapr = derive2 { name="adapr"; version="1.0.2"; sha256="1mbl0b9njjf0zwddkylmwyvrridqqx69v9invxqhc5kc6fvk4f10"; depends=[devtools digest doParallel gdata ggplot2 git2r igraph knitr plotly plyr rmarkdown shiny shinydashboard]; }; - adaptDA = derive2 { name="adaptDA"; version="1.0"; sha256="0nk7n628d30jz03a2rmpgzrwwd79rlpqvr6lwhilmkg1gblvz7r1"; depends=[MASS]; }; - adaptMCMC = derive2 { name="adaptMCMC"; version="1.2"; sha256="07zf7kv7q885zjqxcrdl09mzjmjn028g40r1l11y8cg697q0qx75"; depends=[coda Matrix]; }; + adapr = derive2 { name="adapr"; version="2.0.0"; sha256="1s57jdbi5pik56xjz1d4438ax6cywg2yq2s47h5g6wrwvpgr1qfw"; depends=[archivist devtools digest doParallel gdata ggplot2 git2r igraph knitr plotly plyr rmarkdown shiny shinydashboard versions]; }; + adaptMCMC = derive2 { name="adaptMCMC"; version="1.3"; sha256="08v11rl0p4w94knb0yzs1ysj42xillya62yaw3zm40d4pqv7vcky"; depends=[coda Matrix]; }; adaptTest = derive2 { name="adaptTest"; version="1.0"; sha256="08d7a5dlzhaj236jvaw3c91008l66vf5i4k5anhcs32a3j8yh2iv"; depends=[lattice]; }; adaptiveGPCA = derive2 { name="adaptiveGPCA"; version="0.1.1"; sha256="1jhkiz0gdjvgclqfksm10zza9iwy1z6k5wpviwa4r9a936f1i88k"; depends=[ape ggplot2 phyloseq shiny]; }; adaptivetau = derive2 { name="adaptivetau"; version="2.2-1"; sha256="1hd2l1jv4i5mg0k0g8bbrvv43nk1zxbwh21594zayrzjyikb2593"; depends=[]; }; @@ -3971,59 +4058,63 @@ in with self; { addinslist = derive2 { name="addinslist"; version="0.2"; sha256="04jqhdy0axs1a9c0cfi3pqy9hd67jqxz79a2lj209gd27qv1q22c"; depends=[curl devtools DT miniUI rappdirs rmarkdown rvest shiny shinyjs xml2]; }; additiveDEA = derive2 { name="additiveDEA"; version="1.1"; sha256="15nxpdybsda6yhjk23bpafr8v1zdx8332pcxf26k795q3ypjpiy2"; depends=[Benchmarking lpSolveAPI]; }; additivityTests = derive2 { name="additivityTests"; version="1.1-4"; sha256="048ds90wqjdjy1nyhna3m06asdklbh8sx1n556kss2j1r1pma1sw"; depends=[]; }; - addreg = derive2 { name="addreg"; version="2.0"; sha256="1lc8p70di466i061jrbahq4hir4g5a8rns6044jjjg8v7b1y8alc"; depends=[combinat glm2]; }; - ade4 = derive2 { name="ade4"; version="1.7-8"; sha256="1a5p3wf8l9cp1bjp57b1pc5bqs39kw1v21i4waj9j18wawzlmpb6"; depends=[]; }; + addreg = derive2 { name="addreg"; version="3.0"; sha256="13bwmgxylwi02g60j1rr51cr5jvvkl2nvf2lnnhnq46fhvs2ma7s"; depends=[combinat glm2 turboEM]; }; + ade4 = derive2 { name="ade4"; version="1.7-10"; sha256="0zk81x0yn30gbyc0jpzyw1nxd08ccihl6vyk0ijvj3aw3nr5flc6"; depends=[MASS]; }; ade4TkGUI = derive2 { name="ade4TkGUI"; version="0.2-9"; sha256="0kfnikkzhyfxskrphr65b8amjhdfq35x6dda4kivdhn7ak07s3ll"; depends=[ade4 adegraphics lattice tkrplot]; }; adeba = derive2 { name="adeba"; version="1.0.2"; sha256="12zs6rh7sl1fsf8q20hgqms5pykmysnb9mfcwf9x63g44yi26dj4"; depends=[pdist Rcpp]; }; - adegenet = derive2 { name="adegenet"; version="2.1.0"; sha256="16k3yim5zy68gmng60xcybs3dr82mc3n6989pi5ich9b01hl1r3y"; depends=[ade4 ape boot dplyr ggplot2 igraph MASS reshape2 seqinr shiny spdep vegan]; }; - adegraphics = derive2 { name="adegraphics"; version="1.0-8"; sha256="1588n1cqgzdv4lpdgsyj47mha41n11sb36vvjdix3drncq997p9b"; depends=[ade4 KernSmooth lattice latticeExtra RColorBrewer sp]; }; - adehabitat = derive2 { name="adehabitat"; version="1.8.19"; sha256="0vqslabmplnwci3hyidniss21af5hvq6z1jh3afbp78ibshq5a15"; depends=[ade4 shapefiles sp tkrplot]; }; + adegenet = derive2 { name="adegenet"; version="2.1.1"; sha256="0ynfblp0hbd3dp3k86fn1wyhqr28lk6hs2bg4q7gyf0sfdfzwhrh"; depends=[ade4 ape boot dplyr ggplot2 igraph MASS reshape2 seqinr shiny spdep vegan]; }; + adegraphics = derive2 { name="adegraphics"; version="1.0-9"; sha256="1fscmisvfd3j9fy1562pjsfpgx16fhr5xwmkzmssxhgyia19f4sr"; depends=[ade4 KernSmooth lattice latticeExtra RColorBrewer sp]; }; + adehabitat = derive2 { name="adehabitat"; version="1.8.20"; sha256="18z4a8168a2c7248s15hwkjj70dzlkif360cy28jry4a61cm6d81"; depends=[ade4 shapefiles sp tkrplot]; }; adehabitatHR = derive2 { name="adehabitatHR"; version="0.4.15"; sha256="1bwx2mfkzfknr6fjjkbx2xnm4gksd78i8fz0bcizqyi1zhg5hd0c"; depends=[ade4 adehabitatLT adehabitatMA deldir sp]; }; adehabitatHS = derive2 { name="adehabitatHS"; version="0.3.13"; sha256="158a6qzks0hml6hk4f1vr66gvwdn09792i2ca3k23061i3j3xp75"; depends=[ade4 adehabitatHR adehabitatMA sp]; }; - adehabitatLT = derive2 { name="adehabitatLT"; version="0.3.22"; sha256="15hh50c0c4hmkb8859vc1rkbry71pbr71a79nr3z0c62zs497l9z"; depends=[ade4 adehabitatMA CircStats sp]; }; + adehabitatLT = derive2 { name="adehabitatLT"; version="0.3.23"; sha256="0hf6wpwhsvfp906xk5sadfnvz524zmm05d0h2zxpx6089c6hnw3j"; depends=[ade4 adehabitatMA CircStats sp]; }; adehabitatMA = derive2 { name="adehabitatMA"; version="0.3.12"; sha256="13mhj36nfs36988g53yrmhyd8yq2zzxl8ppzql63964n04fybbpb"; depends=[filehash sp]; }; - adephylo = derive2 { name="adephylo"; version="1.1-10"; sha256="1hj9nkl2z2xdb5yv9a7fb7zn9sd41lrhk2ff5z8s88xab3b2vhnc"; depends=[ade4 adegenet ape phylobase]; }; - adepro = derive2 { name="adepro"; version="0.1.0"; sha256="0gvqfrdmd755nz72022wq5vmdh2z83lr7bg44b07bxyd6id2pak0"; depends=[audio Cairo MASS shape shiny shinyBS]; }; - adespatial = derive2 { name="adespatial"; version="0.0-9"; sha256="0cmpsf4vhllykmvkxd71qw8axw270zhj9g7n1nr1myvy46p8iqy2"; depends=[ade4 adegraphics adephylo lattice MASS shiny sp spdep]; }; + adephylo = derive2 { name="adephylo"; version="1.1-11"; sha256="06pnrycc7562h17gxbli935289a48na3p4vpb2w96i5cbrjg4jqm"; depends=[ade4 adegenet ape phylobase]; }; + adepro = derive2 { name="adepro"; version="2.0.0"; sha256="0q9h7wmkgdnbhg2ygw32jl0bm2vrl32ig2nci9pphgwpsfzb34jq"; depends=[audio Cairo MASS shape shiny shinyBS]; }; + adespatial = derive2 { name="adespatial"; version="0.1-1"; sha256="19i83s19sbvjm5k0gkw8awz359q67rr3768icsjd118fji45dvg0"; depends=[ade4 adegraphics adephylo lattice MASS shiny sp spdep]; }; adfExplorer = derive2 { name="adfExplorer"; version="0.1.2"; sha256="0jgh5378ky3bng1zmrvw898ni2nr0lnw9ngkkjxq3i5syp889b09"; depends=[]; }; adhoc = derive2 { name="adhoc"; version="1.1"; sha256="0a59fv9glcqh4zzd0887ndrhlcaylja6vay2ifajp8an29gjk1vv"; depends=[ape pegas polynom]; }; adimpro = derive2 { name="adimpro"; version="0.8.2"; sha256="0nfzk9pp4p16c1nvpidngag96r845376h8ljh7m6p6rhk9fs4jdw"; depends=[awsMethods]; }; adiv = derive2 { name="adiv"; version="1.1"; sha256="12m8p1agahzck1nm8j765wacc6vrl0pa31wld4rqxl7c2pvhs7f4"; depends=[ade4 adegraphics adephylo ape cluster phylobase]; }; - adjclust = derive2 { name="adjclust"; version="0.5.2"; sha256="0jip7y6vi3p6f1whv5gjapcp2y16l4cvx26x1jmycbjkj0l0zb2k"; depends=[HiTC Matrix matrixStats snpStats]; }; + adjclust = derive2 { name="adjclust"; version="0.5.6"; sha256="0hff2fjp6dyrsc6crcipq72x7bs3jblv42z7v2c63clrrs7byc0h"; depends=[Matrix matrixStats]; }; adjustedcranlogs = derive2 { name="adjustedcranlogs"; version="0.1.0"; sha256="08apfvpqvnnalx230p4qf5ckrwm1sgzras4zfrysgym5d4map9ci"; depends=[cranlogs dplyr lubridate rvest xml2]; }; + adklakedata = derive2 { name="adklakedata"; version="0.6.1"; sha256="1lzj3ib4bgfkq5lq12n47pwc52h7k35xbbwj6brwsgx1gd4fx3x6"; depends=[httr rappdirs]; }; adlift = derive2 { name="adlift"; version="1.3-3"; sha256="0q4ipk9yax4wqp3jckpx6ihriqaaaz0knxd19cm20qzdx37vz4id"; depends=[EbayesThresh]; }; admixturegraph = derive2 { name="admixturegraph"; version="1.0.2"; sha256="0ld4qyyvbnr5lz9ff64wjwif4c9xnqyjmbfgbl9bk6pia98zppl3"; depends=[doParallel dplyr foreach ggplot2 MASS neldermead pracma]; }; + adnuts = derive2 { name="adnuts"; version="1.0.0"; sha256="0jy9wq269r7s70bwld6ngxc6vmaj9vplq4wn97x4f3c6lqy42swc"; depends=[ellipse rstan]; }; ads = derive2 { name="ads"; version="1.5-2.2"; sha256="17k24dihl41jgkkglhnkj7lvvl53dgahjkb5jhfmfgk6i16c7s23"; depends=[ade4 spatstat]; }; advclust = derive2 { name="advclust"; version="0.4"; sha256="1g8a8q4zh6d4152jb66fh7wj7k6ks5k4kfcazzw70jdn10yi6b38"; depends=[clue ggplot2 knitr MASS reshape2]; }; adwave = derive2 { name="adwave"; version="1.2"; sha256="1fnaq9v84y52kb66aq4g0xiqgllk7mi0is5qiafqf546hck3kzz6"; depends=[waveslim]; }; aemo = derive2 { name="aemo"; version="0.2.0"; sha256="11msifszq7pzmcmwibf2dk2j5dqjc74hrxdxshlprkp6p8sfhijh"; depends=[assertthat dplyr lubridate stringr]; }; + afCEC = derive2 { name="afCEC"; version="1.0.2"; sha256="0jdppp93z5nb8m5qbry6cvd472mwiq1yrmm11906c3z2bfz7791f"; depends=[Rcpp RcppArmadillo rgl]; }; afc = derive2 { name="afc"; version="1.4.0"; sha256="1iy1wa88kf6zi6x7lbd0jdir653cvzvdraliqpxbac413wwb5gwl"; depends=[]; }; - afex = derive2 { name="afex"; version="0.18-0"; sha256="0ls4mc75f2swhxrabvyilggdhf4ps893d4krpp07magz3iyi7gv5"; depends=[car coin lme4 lmerTest lsmeans pbkrtest reshape2 stringr]; }; + afex = derive2 { name="afex"; version="0.19-1"; sha256="10qbwqwashddj93ivvwlkf3lk14411lmxp24cn7sahqr9lm714f7"; depends=[car coin emmeans lme4 lmerTest pbkrtest reshape2 stringr]; }; affluenceIndex = derive2 { name="affluenceIndex"; version="1.0"; sha256="1nb2dlsnvjsvkyrfdaskmpr3kv3qgdfb60xgmzvscfli0yf4dzr1"; depends=[]; }; afmToolkit = derive2 { name="afmToolkit"; version="0.0.1"; sha256="1pm3xyh9vq10mmfgknlvlfr9f027xprrgy1dvbbxpi7f111hv1gl"; depends=[assertthat DBI dplyr ggplot2 gridExtra minpack_lm scales tibble]; }; afpt = derive2 { name="afpt"; version="1.0.0"; sha256="0kshyzvw8sp7p686xi98g758zld3n7kq44lnvly8d0y8fg6ahcl2"; depends=[]; }; aftgee = derive2 { name="aftgee"; version="1.0-0"; sha256="0gfp05r6xvn9fcysbqyzkz916axpsc2d3lb5wmb1v92z1zw3037b"; depends=[BB geepack MASS survival]; }; - agRee = derive2 { name="agRee"; version="0.5-0"; sha256="16ijw02x5qvc8rppf0yn35aljd35alnvjkjyi6725nywjib2xy5x"; depends=[coda lme4 miscF R2jags]; }; + agRee = derive2 { name="agRee"; version="0.5-1"; sha256="1hmqvpcz4vnpcl9f92q5fy1ca89l9sq25fnsw2mxfsa0yqbyxpw6"; depends=[coda lme4 miscF R2jags]; }; + aggregation = derive2 { name="aggregation"; version="1.0.1"; sha256="0j9g604m2ccc7hcy02539yja9cf3xcbl25gvp838bp4x8w18my46"; depends=[]; }; agop = derive2 { name="agop"; version="0.1-4"; sha256="1jwyl02z053rsdw9hryv1nyj9wlq310l51fghp1p0j51c159mlpx"; depends=[igraph Matrix]; }; + agriTutorial = derive2 { name="agriTutorial"; version="0.1.2"; sha256="0zcyawmhflm4rbxnyf6gdwrnff4f13yajc81n13ykw7bfi8xphqi"; depends=[emmeans ggplot2 lattice lmerTest nlme pbkrtest]; }; agricolae = derive2 { name="agricolae"; version="1.2-8"; sha256="1c6n52jralp33hl3nmpv9fc9vsvs6lcz9j75f2zbz0r4sqd2mw89"; depends=[AlgDesign cluster klaR MASS nlme spdep]; }; - agridat = derive2 { name="agridat"; version="1.12"; sha256="1b3dgrp6mkfpfaywqdm22sakadhnl1vlyj1n3rq6bc2f0gf8kcrw"; depends=[lattice reshape2]; }; + agridat = derive2 { name="agridat"; version="1.13"; sha256="1029n2jkbvybvkbf4pwdjrw6m05xyzn5xyqyfziqb7xnw51ksm2p"; depends=[]; }; agrmt = derive2 { name="agrmt"; version="1.40.4"; sha256="1y2gnq6b4zkxknygg73r8qrd435y7c69iqn8i56kwk1ccc1rwddx"; depends=[]; }; agsemisc = derive2 { name="agsemisc"; version="1.3-1"; sha256="1905q35jgjhghlawql43yh296kbpysp927x3hj750yshz5zayzyr"; depends=[lattice MASS]; }; ahaz = derive2 { name="ahaz"; version="1.14"; sha256="1z7w5rxd5cya7kxhgxqvn72k87y33ginxra9g7j9wrfs5jgx6kvx"; depends=[Matrix survival]; }; ahnr = derive2 { name="ahnr"; version="0.2.0"; sha256="0bfy7xxfxfzhv4yl9dlsyl304673p23r2h0lz3lv75iqp2gbzdjr"; depends=[ggplot2 magrittr matrixcalc pdist pracma purrr visNetwork]; }; ahp = derive2 { name="ahp"; version="0.2.11"; sha256="09n06k5dmmpw6h6s51x9xy6rkk54fswss8pflh3v9nprbx7vzx4i"; depends=[data_tree DiagrammeR formattable yaml]; }; aiRthermo = derive2 { name="aiRthermo"; version="1.1"; sha256="0i3sq7i37i82ad70z2mai09rxzk4kk27hfg5jjbh6pajwzyn5yri"; depends=[]; }; - aidar = derive2 { name="aidar"; version="1.0.0"; sha256="01vs14bz4k504q5lx65b60kyi7hgvjdmib8igiipjmg4snwh8hdk"; depends=[XML]; }; + aidar = derive2 { name="aidar"; version="1.0.5"; sha256="1q2iz2qzh2yl0v0sc537xq4vbx2nblym3kv419vr7jvrghdpx3vj"; depends=[XML]; }; aimPlot = derive2 { name="aimPlot"; version="1.0.0"; sha256="1d52b7kccxba6j7n0gbd7pzs0p87zn32vv8gdf2f7lyr75qzgz7x"; depends=[ggplot2]; }; airGR = derive2 { name="airGR"; version="1.0.9.64"; sha256="08nw07v5d5pljk839i5j5wgrc5lny7v6kl8m2hd6bm9aijql7hg4"; depends=[]; }; aire_zmvm = derive2 { name="aire.zmvm"; version="0.5.0"; sha256="14n2wycfxpj8wb45671pysqxr434b3wgrnbx2vfpsxw46lkqid0i"; depends=[dplyr httr lubridate readr rvest sp stringr tidyr xml2]; }; ajv = derive2 { name="ajv"; version="1.0.0"; sha256="1qd5ncb7rdnnvqfknsvq9nrpxrh0zv3jyh4b91dcvfvhp262vfrm"; depends=[RJSONIO V8 yaml]; }; akima = derive2 { name="akima"; version="0.6-2"; sha256="1klprj4a2pgy5pwdwnrn3siisi2lh8hr4z6vz38sdvjkcmakxnk1"; depends=[sp]; }; akmeans = derive2 { name="akmeans"; version="1.1"; sha256="1nqbxbx583n0h2zmpy002rlmr6j86j6bg76xj5c69brrh59dpyw1"; depends=[]; }; - alR = derive2 { name="alR"; version="2.2.0"; sha256="1hri2vifgwrklmx5087vlxkd1nv1y42rrhpzm4nk1sbn2b3lcway"; depends=[alabama DEoptimR pbdMPI Rcpp RcppArmadillo]; }; alabama = derive2 { name="alabama"; version="2015.3-1"; sha256="0mlgk929gdismikwx4k2ndqq57nnqj7mlgvd3479b214hksgq036"; depends=[numDeriv]; }; alakazam = derive2 { name="alakazam"; version="0.2.8"; sha256="0lilldxynwhp1i538k3xb9c73956agxj6v8zickxkba1sx4k5zrc"; depends=[dplyr ggplot2 igraph lazyeval progress Rcpp readr scales seqinr stringi]; }; - ald = derive2 { name="ald"; version="1.1"; sha256="1ar9mrvfw2jz4js9prbp9icsync7fw6wpirpximsr4cy1klqjfpn"; depends=[]; }; + ald = derive2 { name="ald"; version="1.2"; sha256="1xmvxmyc1nmsrlyr0rvzz20jx6g1f2jvxpg9f39v48ngg5gmanjj"; depends=[]; }; alfred = derive2 { name="alfred"; version="0.1.4"; sha256="1g4l0fz0lw34ffp6spx535zfrgkgwm41qrn0bg3lpl1kx9m3i2ir"; depends=[dplyr jsonlite lubridate magrittr tibble tidyr]; }; algorithmia = derive2 { name="algorithmia"; version="0.0.2"; sha256="0kly70l9si8ni8n5xm30vai70pvfvip6354scvjqj34362s0lm0a"; depends=[base64enc httr rjson xml2]; }; algstat = derive2 { name="algstat"; version="0.0.2"; sha256="1ssdrrwnxrhx3syndqxqcaldlbnjamk3x2yiq7jgxy0qsiadmqsi"; depends=[mpoly Rcpp reshape2 stringr]; }; @@ -4037,7 +4128,7 @@ in with self; { alphaOutlier = derive2 { name="alphaOutlier"; version="1.2.0"; sha256="09yrbv7jsiymw5gzp8p92ki70v1fys2k75x4sb9s7wy3c58wn1cd"; depends=[nleqslv quantreg Rsolnp]; }; alphabetr = derive2 { name="alphabetr"; version="0.2.2"; sha256="1pmp6zwhgycb38y5jbvrbv2nza7gyjh508vy09ml483c2cysvc1r"; depends=[clue dplyr multicool Rcpp]; }; alphahull = derive2 { name="alphahull"; version="2.1"; sha256="129b2j9j60p2wvbb8703x18pydv1g715vmjcb1a80v70i93w4f49"; depends=[ggplot2 R_utils sgeostat spatstat splancs tripack]; }; - alphashape3d = derive2 { name="alphashape3d"; version="1.2"; sha256="1apbirffqipdj618qgqh7vjlhg9fp6ncxb0yk4dclpn7g645863x"; depends=[geometry rgl]; }; + alphashape3d = derive2 { name="alphashape3d"; version="1.3"; sha256="15l8hsn3jcn5jzwfpya99v2mzrgmhl3i587nw6cx4aky75ajslcx"; depends=[geometry rgl]; }; alphavantager = derive2 { name="alphavantager"; version="0.1.0"; sha256="02vv0mks73rih4xwabsnk8rkl3cipd27k5lak9lp1rl0agp8g68v"; depends=[devtools dplyr glue httr jsonlite lubridate purrr readr stringr tibble tidyr]; }; alr3 = derive2 { name="alr3"; version="2.0.5"; sha256="0zrrsv2kjq3cky3bhk6gp32p1qpr1i5k2lx7c1w08bql0nb1x740"; depends=[car]; }; alr4 = derive2 { name="alr4"; version="1.0.5"; sha256="0m8jgc4mfni17psf8m0avf0m364vcq5k3c9x807p98ch2z5nsygv"; depends=[car effects]; }; @@ -4050,9 +4141,10 @@ in with self; { amen = derive2 { name="amen"; version="1.3"; sha256="1qaznfmnh3dlnp41afd37lr328qzy50hn8hi0c302wj0f992ycqg"; depends=[]; }; aml = derive2 { name="aml"; version="0.1-1"; sha256="09xxlxp784wlb561apns3j8f2h9pfk497cy5pk8wr4hhqqv4d3al"; depends=[lars]; }; ampd = derive2 { name="ampd"; version="0.2"; sha256="0bi8qngd37n60ym516yjcahxc536vdwm60rq5ld32170hww69j7c"; depends=[]; }; + amt = derive2 { name="amt"; version="0.0.2.0"; sha256="1w6rdyzyzxsa5qxmcpm1ahgz65z72nil3ay51m8g9qjk7v1xrj8p"; depends=[broom circular dplyr fitdistrplus FNN geosphere lazyeval leaflet lubridate maptools purrr raster Rcpp rgeos rlang sp survival tibble tidyr tidyverse]; }; anMC = derive2 { name="anMC"; version="0.2.0"; sha256="1j6dah49sgfsb7bj4xys5rcaqw12rrkqhqryqz2xhdkazjmz3gpq"; depends=[mvtnorm Rcpp RcppArmadillo]; }; anacor = derive2 { name="anacor"; version="1.1-3"; sha256="0mj8g9p4fla0ax9jvcq7kii4lrhj8g872p11nys06anva22qjp51"; depends=[car colorspace fda]; }; - analogsea = derive2 { name="analogsea"; version="0.5.0"; sha256="1lfa8vl42n2wjl8r4m0144sircrrdvcanjd85l5m54r4vack846p"; depends=[httr jsonlite magrittr yaml]; }; + analogsea = derive2 { name="analogsea"; version="0.6.0"; sha256="1fcvf3yci3szm155pnk89q36dgc55wdlffvll642zn26zc5d1y5n"; depends=[aws_s3 httr jsonlite magrittr yaml]; }; analogue = derive2 { name="analogue"; version="0.17-0"; sha256="00wk4jnzif28ibx9s3m68qdx64ycdgg5yr6ybb0srlydikvf1sy8"; depends=[brglm lattice MASS mgcv princurve vegan]; }; analogueExtra = derive2 { name="analogueExtra"; version="0.1-1"; sha256="1s3qs10hf6hkna0bicid1mc8x8r449bl93xpgyw6lnsjgh2yx62c"; depends=[analogue rgl vegan3d]; }; analytics = derive2 { name="analytics"; version="2.0"; sha256="1jkdjqc3fnvvsgi6x9ncf36rxzq0a55cmgkcv92mfmpcramg2lk6"; depends=[car cluster fractal lmtest MASS np powerplus robust trend TSA urca]; }; @@ -4069,15 +4161,16 @@ in with self; { animalTrack = derive2 { name="animalTrack"; version="1.0.0"; sha256="0jlvfflpaq64s48sblzh1n1vx8g3870iss97whigri29s6hn79ry"; depends=[rgl]; }; animation = derive2 { name="animation"; version="2.5"; sha256="0pxmihfr3q1hh4cdnzf7wbzqak5spa3kv4p1wl89giqqngqzwcmj"; depends=[]; }; anipaths = derive2 { name="anipaths"; version="0.8.0"; sha256="1czs8s4kb1a0s25bd4nv1w1p52wxr4q5zfch5xgp766rgfpahylr"; depends=[animation knitr RColorBrewer rgdal scales sp]; }; + annovarR = derive2 { name="annovarR"; version="1.0.0"; sha256="0l2csp06m5f3i1b4h0pvl8mmzx25c0b411c5sdc3qszirbplh038"; depends=[AnnotationDbi BioInstaller configr data_table DBI futile_logger glue ngstk RMySQL RSQLite stringi stringr vcfR]; }; anocva = derive2 { name="anocva"; version="0.1.1"; sha256="1byg40jla71k1901js5h9yq89j63d00vkm60id1fxlpv95c4wdrr"; depends=[cluster]; }; anoint = derive2 { name="anoint"; version="1.4"; sha256="10gdqgag9pddvxh80h458gagvv1474g4pcpa71cg3h7g62rqvmv5"; depends=[glmnet MASS survival]; }; anomalyDetection = derive2 { name="anomalyDetection"; version="0.2.4"; sha256="0a9m9bxz9v9xx19lq8yih727p7zy25ndfamwajzgh0zvx394h0jz"; depends=[caret dplyr ggplot2 gmp magrittr MASS plyr purrr Rcpp RcppArmadillo tibble tidyr]; }; anominate = derive2 { name="anominate"; version="0.6"; sha256="01p2qkqf88bzhwywyass5r8dwg2ycflmkbzmsps7fzy0kv3xyb02"; depends=[coda MCMCpack pscl wnominate]; }; anonymizer = derive2 { name="anonymizer"; version="0.2.0"; sha256="0zlzxcqy8fjhh6ab58a1pi0k686dzgap58d160ms6bsr5mgn3fbf"; depends=[]; }; - antaresProcessing = derive2 { name="antaresProcessing"; version="0.11"; sha256="165rqsqq3cp5kak4513rv5ibbq61nipvybvmm4m8ynwbd4q5p7p9"; depends=[antaresRead data_table]; }; + antaresProcessing = derive2 { name="antaresProcessing"; version="0.13"; sha256="0v6jyvw2bxjagbkcd08w6rxdws34idqd938726c0s36cj1a583n5"; depends=[antaresRead data_table]; }; antaresRead = derive2 { name="antaresRead"; version="2.0.2"; sha256="0rilfd8f8wc57ai8s1xl4h346y3qdgspa8j694nnj9n4zss30ycb"; depends=[data_table lubridate plyr shiny stringr]; }; - antaresViz = derive2 { name="antaresViz"; version="0.11"; sha256="0v6li8m6zl39pvs7h6cwc5zqsap7q973cqcdwar29l0zrg2f6x4a"; depends=[antaresProcessing antaresRead data_table dygraphs geojsonio htmltools htmlwidgets leaflet leaflet_minicharts lubridate magrittr manipulateWidget miniUI plotly shiny sp tibble webshot]; }; - antitrust = derive2 { name="antitrust"; version="0.95.1"; sha256="14qz4c78lyfhgh3xyybn2sb8kl4rjzvb3dwrwxl9dzjmk5k6ab7i"; depends=[BB evd ggplot2 MASS numDeriv]; }; + antaresViz = derive2 { name="antaresViz"; version="0.12.0"; sha256="0066kidfkiyqw6fzkvi40hdpy25djvni9s0q69c8gjvzrh84i5p5"; depends=[antaresProcessing antaresRead assertthat data_table dygraphs geojsonio htmltools htmlwidgets leaflet leaflet_minicharts lubridate manipulateWidget plotly raster rgeos shiny sp spMaps webshot]; }; + antitrust = derive2 { name="antitrust"; version="0.98"; sha256="1n8js5hwl96a76g50mq69hsf46v6ajf3s7kr19pfrqnp3jgi3gk3"; depends=[BB evd ggplot2 MASS numDeriv]; }; antiword = derive2 { name="antiword"; version="1.1"; sha256="0nbx2l0d2y4qvcw4dw3m26zfkgdmav4cq0l00gib7l3y9pqxzjh5"; depends=[sys]; }; anytime = derive2 { name="anytime"; version="0.3.0"; sha256="1byhgplskj17d0gib9sajfnzyv8p9slgq1vy8fq9j2ibirl86a91"; depends=[BH RApiDatetime Rcpp]; }; aod = derive2 { name="aod"; version="1.3"; sha256="1a6xs5d5289w69xd2salsxwikjjhjzvsnplqrq78b1sr6kzfyxz3"; depends=[]; }; @@ -4090,7 +4183,7 @@ in with self; { apaStyle = derive2 { name="apaStyle"; version="0.5"; sha256="1x3kgyxhgbx3r7wi759j75wh811jcm6z559mrk4zm4p99vqz10bl"; depends=[ReporteRs]; }; apaTables = derive2 { name="apaTables"; version="1.5.1"; sha256="1ajff635vvypi457wk55bp8kddm80hg2af3hayp3rvjvdk8a8fjv"; depends=[broom car dplyr MBESS]; }; apc = derive2 { name="apc"; version="1.3"; sha256="1hgkqkvry9is8kjk2w46k637sig7fdznnc75wbrc8bq1hbrmf785"; depends=[lattice]; }; - apcluster = derive2 { name="apcluster"; version="1.4.4"; sha256="16m6akgs4cg5423cdz25i11wayff2c2qbq2sih5yfs9ssdk4ii64"; depends=[Matrix Rcpp]; }; + apcluster = derive2 { name="apcluster"; version="1.4.5"; sha256="0ipg5m3d7fnbvvlavbv8q8ixyrcgdspzwkv00q93f4biybza27x6"; depends=[Matrix Rcpp]; }; apdesign = derive2 { name="apdesign"; version="1.0.0"; sha256="041zyd7ih9nnj92jj9vb9ya1ij9lmj1dzx64q74vyiadw1ix5l66"; depends=[Matrix]; }; ape = derive2 { name="ape"; version="5.0"; sha256="0q59pmxawz498cb9mv5m49lhiwxib8ak94yyydz7qg8b6lpd4bn3"; depends=[lattice nlme Rcpp]; }; apercu = derive2 { name="apercu"; version="0.2.3"; sha256="0w9hi8pdjb3nschh4cy387q67jxhkl2bn9vir949rsl831x4cs1j"; depends=[pls]; }; @@ -4107,7 +4200,7 @@ in with self; { approxmatch = derive2 { name="approxmatch"; version="1.0"; sha256="1z1lrbfvm380p2az88hrxr3f2cgbv2h70wzm99vi9a2dmh0pl7qy"; depends=[]; }; aprean3 = derive2 { name="aprean3"; version="1.0.1"; sha256="17rnq02sncl6rzwyln10200s43b8z1s2j0kdi9kgcb6qr51v12rv"; depends=[]; }; apricom = derive2 { name="apricom"; version="1.0.0"; sha256="1gyd1yln14cn0iswj7sjs4hav6j6d4f3ncps4gqbci5fwha5blcr"; depends=[logistf penalized rms shrink]; }; - aprof = derive2 { name="aprof"; version="0.3.2"; sha256="1rv7nr1y7jdvj2p8c6p67sn11bvmif2kj70fb2029hnsjk7lm15b"; depends=[]; }; + aprof = derive2 { name="aprof"; version="0.3.9"; sha256="1w95z3n08nq2fsj8dljgfkz76s1jc3sz2aia3bnfq62yd003qsnl"; depends=[]; }; apsimr = derive2 { name="apsimr"; version="1.2"; sha256="14vhsm6am2c2q2sgabnhxr0lgldifss0anjpisrhjqk04njllviy"; depends=[ggplot2 lubridate MASS mgcv reshape2 XML]; }; apsrtable = derive2 { name="apsrtable"; version="0.8-8"; sha256="1qmm89npjgqij0bh6p393wywl837lfsshp2mv9b5izh1sg2qfwvw"; depends=[]; }; apt = derive2 { name="apt"; version="2.5"; sha256="1y18bqnnxy5p0xx9gbfrnrzq3nlhw3psl5zlibrw6lfhb8lxd4mk"; depends=[car copula erer gWidgets urca]; }; @@ -4117,17 +4210,17 @@ in with self; { aqr = derive2 { name="aqr"; version="0.4"; sha256="04frgil3nbxsww66r9x0c6f308pzqr1970prp20bdv9qm3ym5axw"; depends=[RCurl xts]; }; arabicStemR = derive2 { name="arabicStemR"; version="1.2"; sha256="1vflynbi7aln7x2p4jg9gsvfrxn4v6qkb4wbrzxmj561lqy9fcay"; depends=[]; }; arc = derive2 { name="arc"; version="1.1.3"; sha256="1p186f769vqhd36l5bivm1yi5kjgv9fjmlafjx0ibyascbcz131h"; depends=[arules discretization Matrix R_utils]; }; - archdata = derive2 { name="archdata"; version="1.1"; sha256="07ca51kl5imy6d9s0qi501xxl3zn4q3gbm0w8kvznfw8imclq17z"; depends=[]; }; + archdata = derive2 { name="archdata"; version="1.2"; sha256="0igh6qy3yv5hzprj9izpkqp3f6jkb7pydqzmnl8sqhqjqvb3lnij"; depends=[]; }; archetypes = derive2 { name="archetypes"; version="2.2-0"; sha256="1djzlnl1pjb0ndgpfj905kf9kpgf9yizrcvh4i1p6f043qiy0axf"; depends=[modeltools nnls]; }; - archiDART = derive2 { name="archiDART"; version="2.0"; sha256="1ypbkj0wzpj8rhpjp3vc9yk7icjg40xn0ms11mcmhphkjpczmay5"; depends=[rgl XML]; }; - archivist = derive2 { name="archivist"; version="2.2"; sha256="0fywc2rjvv8j4d4pyky0la2i3ds3ai3nx70drqvgdajdxxms9vsy"; depends=[DBI digest httr lubridate magrittr RCurl RSQLite]; }; + archiDART = derive2 { name="archiDART"; version="3.0"; sha256="0yh9asf45l2fxxm67vg9snaqbvs1bb24lm2xsrb6xrr62avdrqlq"; depends=[rgl sp TDA XML]; }; + archivist = derive2 { name="archivist"; version="2.3"; sha256="0rwdk2scmd06j428zadcxmvshvssf421265632595hvcacqz6yy4"; depends=[DBI digest httr lubridate magrittr RCurl RSQLite]; }; archivist_github = derive2 { name="archivist.github"; version="0.2.2"; sha256="04xb2i47y12ic87gb2l30bldil0505h7s9601hq0afjg3npx6jq7"; depends=[archivist digest git2r httr jsonlite]; }; areaplot = derive2 { name="areaplot"; version="1.2-0"; sha256="0xzfgbnzqsvnq46nsxwyqrwldbaqns3h5np0f5wxpjda9cy2rna1"; depends=[]; }; arf3DS4 = derive2 { name="arf3DS4"; version="2.5-10"; sha256="12cbrk57c9m7fj1x7nfmcj1vp28wj0wymsjdz8ylxhm3jblbgmxc"; depends=[corpcor]; }; - arfima = derive2 { name="arfima"; version="1.6-2"; sha256="05ya1h6xpvs1gmhv68xfm7xf8g3g312ch7ibqi9xhi02vxniwg85"; depends=[ltsa]; }; + arfima = derive2 { name="arfima"; version="1.6-6"; sha256="0nb0r937jcl2khyj7xy41a383dbzdigjls87yjcwwgmzbpcznwal"; depends=[ltsa]; }; argon2 = derive2 { name="argon2"; version="0.2-0"; sha256="0kqn06rpb39jlzizjlnc5c44mfic8llrshxn7ljgmyj35lbqwxqh"; depends=[]; }; argosfilter = derive2 { name="argosfilter"; version="0.63"; sha256="0rrc2f28hla0azw90a5gk3zj72vxhm1b6yy8ani7r78yyfhgm9ig"; depends=[]; }; - argparse = derive2 { name="argparse"; version="1.0.7"; sha256="1ph13n8zv591vc427sihj765h27mkdrjyf1whg3as3i644bjsaqs"; depends=[findpython getopt proto rjson]; }; + argparse = derive2 { name="argparse"; version="1.1.1"; sha256="0fzrbj87b274vf96azdnsjxk2nf45d5wy58vzmlah4b4h7q4j524"; depends=[findpython getopt jsonlite proto]; }; argparser = derive2 { name="argparser"; version="0.4"; sha256="0s1wxshx4jk69wfxhycx973q6y8cmqrfymyjklhq1i8xrj0kmmx9"; depends=[]; }; ari = derive2 { name="ari"; version="0.1.0"; sha256="05pva8jp7dhl46dm1fha6f8mavrs76a6c491fq3mavly8qcbgx44"; depends=[aws_polly progress purrr rmarkdown rvest tuneR webshot xml2]; }; arm = derive2 { name="arm"; version="1.9-3"; sha256="00773z8ai07s9wa2annzjqrxml3z13fh9zqls0z1n7s3h8fwrvqw"; depends=[abind coda lme4 MASS Matrix nlme]; }; @@ -4137,11 +4230,12 @@ in with self; { aroma_cn = derive2 { name="aroma.cn"; version="1.6.1"; sha256="1d9g81b12a3m03wrvb3cvg33fjybgiabpxhci2y2rr6diay42pmr"; depends=[aroma_core matrixStats PSCBS R_cache R_filesets R_methodsS3 R_oo R_utils]; }; aroma_core = derive2 { name="aroma.core"; version="3.1.1"; sha256="0mbhk818m8if6cr7g42yy7ba13jh2xs66xkx4zh7dqlwrrmgjnk1"; depends=[future listenv matrixStats PSCBS R_cache R_devices R_filesets R_methodsS3 R_oo R_rsp R_utils RColorBrewer]; }; arrApply = derive2 { name="arrApply"; version="2.0.1"; sha256="007fsqgb9bsr4mscljhp37dvrk7cv6nrb7y28w8kc7mxvgdq29wg"; depends=[Rcpp RcppArmadillo]; }; + arrangements = derive2 { name="arrangements"; version="1.0.2"; sha256="0vqxx0pzvvqnbklpxrcq7d5ppicwbwk3gb2846in0gqjhn4ya4g1"; depends=[gmp R6]; }; arrayhelpers = derive2 { name="arrayhelpers"; version="1.0-20160527"; sha256="1ib91hpg6xgy0jr4sb8ib19x0v4f5n96lak0qm0z5vksawgcnp1l"; depends=[svUnit]; }; ars = derive2 { name="ars"; version="0.5"; sha256="0m63ljb6b97kmsnmh2z5phmh24d60iddgz46i6ic4rirshq7cpaz"; depends=[]; }; - arsenal = derive2 { name="arsenal"; version="0.6.0"; sha256="1p3yfqjbxg1j1k65n1lfnkgncsw1wbrbvswn5psvn9cdfnjnf939"; depends=[testthat]; }; + arsenal = derive2 { name="arsenal"; version="1.0.0"; sha256="0fv3zq0i28sbdvwh589c27j4k734vr90aik3gxdablgasrhdjfza"; depends=[testthat]; }; artfima = derive2 { name="artfima"; version="1.5"; sha256="1nqsq9fsqk9kag9n7i2r9yvf578nkdfrkkv7qy8650prka0jca2p"; depends=[gsl ltsa]; }; - arules = derive2 { name="arules"; version="1.5-4"; sha256="1j9cckdqr11mxb584svzz89j71mkr6rlqkcd2ps8b95pnqkdaijg"; depends=[Matrix]; }; + arules = derive2 { name="arules"; version="1.5-5"; sha256="05v3sin5w4b28ms34mvk3ha59c74pq20afrlq41ylfxxzffrljar"; depends=[Matrix]; }; arulesCBA = derive2 { name="arulesCBA"; version="1.1.2"; sha256="0c37cffb89gsyv5shpgiksrh5hi2lzdqsk7xl8lxzz6mnv4v1xrj"; depends=[arules caret Matrix testthat]; }; arulesNBMiner = derive2 { name="arulesNBMiner"; version="0.1-5"; sha256="1q4sx6c9637kc927d0ylmrh29cmn4mv5jxxpl09yaclzfihjlk9a"; depends=[arules rJava]; }; arulesSequences = derive2 { name="arulesSequences"; version="0.2-19"; sha256="1cncvrf7za38b3vdwbzy4yrbakj7jbpxrl1jg6bvjnlkymiajavx"; depends=[arules]; }; @@ -4152,13 +4246,14 @@ in with self; { asbio = derive2 { name="asbio"; version="1.5"; sha256="0p54a9x54jg81hd86br6b3dg3sr9kzl9rmnrh7x3m6bkinzc780c"; depends=[deSolve lattice multcompView mvtnorm pixmap plotrix scatterplot3d]; }; ascii = derive2 { name="ascii"; version="2.1"; sha256="19dfbp7k4bjxjn8wdzhbmz7g3za6gn8vcnd5qkm4dz7gg1fg7b8p"; depends=[]; }; asciiSetupReader = derive2 { name="asciiSetupReader"; version="1.2"; sha256="11smjl1cvbsgiql3b90x05aa8bspikijc5vzzw4d0hzpyj1j0zmy"; depends=[data_table haven readr stringi stringr]; }; + asciiruler = derive2 { name="asciiruler"; version="0.2"; sha256="0xhkbsy9dypk09avazgxczyfkh3rhdxhwci688dw1lxnhxv1hj24"; depends=[stringr]; }; asd = derive2 { name="asd"; version="2.2"; sha256="0p3r4qjam3sl3rpcilb0pgx4xx3ly71xqnvkv31vzjs885lgxz4l"; depends=[mvtnorm]; }; asdreader = derive2 { name="asdreader"; version="0.1-3"; sha256="15a922aw0v5w4hrha03xifx8cpifcc773gambgwqq6i5nz08ya26"; depends=[]; }; ash = derive2 { name="ash"; version="1.0-15"; sha256="1ay2a2agdmiz7zzvn26mli0x0iwk09g5pp4yy1r23knhkp1pn2lb"; depends=[]; }; ashr = derive2 { name="ashr"; version="2.0.5"; sha256="0blr19ipcanwjxizilkd8hb37dlhb6idjcw2lf0ll8pkd2l68f5z"; depends=[assertthat doParallel etrunct foreach pscl Rcpp SQUAREM truncnorm]; }; asht = derive2 { name="asht"; version="0.9.3"; sha256="075gzxly8sqkbwnznxcr4z3zs1qvlyl8c4ishgxk035ik1w6p16n"; depends=[bpcp coin exact2x2 exactci perm ssanv]; }; aslib = derive2 { name="aslib"; version="0.1"; sha256="0dkb6bb6dqavjklbciqxqhi3fdqib9asdnhiap2gp9b9wfnkyq7k"; depends=[BatchExperiments BatchJobs BBmisc checkmate corrplot ggplot2 llama mlr parallelMap ParamHelpers plyr reshape2 RWeka stringr yaml]; }; - asnipe = derive2 { name="asnipe"; version="1.1.5"; sha256="1kwwl6k3fpk7pgf1qkzyglgwvsf4g92hhs7aiaryqq3ys7a029i8"; depends=[MASS Matrix]; }; + asnipe = derive2 { name="asnipe"; version="1.1.8"; sha256="10pza52bcfdj9412hr69lcv4n43y0n91hfkbq8338fsqpad98ilz"; depends=[MASS Matrix]; }; aspace = derive2 { name="aspace"; version="3.2"; sha256="1g51mrzb6amafky2kg2mx63g6n327f505ndhna6s488xlsr1sl49"; depends=[Hmisc shapefiles splancs]; }; aspect = derive2 { name="aspect"; version="1.0-4"; sha256="1kxddm8v1y0v2r7lg24r1wpzk7lqzxlrpzq5xb9kn343g53lny6i"; depends=[]; }; aspi = derive2 { name="aspi"; version="0.2.0"; sha256="0rhvxw243vvdv3hxa6pi343gcjc2cbxq1jzqirl9k1l4i3897l87"; depends=[]; }; @@ -4186,27 +4281,28 @@ in with self; { assist = derive2 { name="assist"; version="3.1.3"; sha256="0ngnn75iid5r014fcly29zhcfpqkqq24znncc3jdanbhdmfyybyz"; depends=[lattice nlme]; }; assocInd = derive2 { name="assocInd"; version="1.0.1"; sha256="16yzgvlqbapjhvzm5nw8vfrhh8mp9llnhck4bpgmszyrh93z1ha5"; depends=[]; }; assortnet = derive2 { name="assortnet"; version="0.12"; sha256="1vyzrb8vsi9pcdn6jd83k77bg0q2a3dwdvlnmxnshqiif2pakb8m"; depends=[]; }; - aster = derive2 { name="aster"; version="0.9.1"; sha256="0z976r9ljawfdzvmsb1arpllgs3l2r5wimdvbpcw08r1qdyyzwj8"; depends=[trust]; }; + aster = derive2 { name="aster"; version="0.9.1.1"; sha256="12zn3wcx0n37fbnwwcz517libsgkbfphwbr4m68zba4craqhh5mi"; depends=[trust]; }; aster2 = derive2 { name="aster2"; version="0.3"; sha256="17d200sg0vn1fj6lb480dhszm70q6ipjldilb3x0jp72hiczakk9"; depends=[Matrix]; }; astro = derive2 { name="astro"; version="1.2"; sha256="1c7zrycgj2n8gz50m94ys1dspilds91s1b2pwaq6df1va17pznby"; depends=[MASS plotrix]; }; astroFns = derive2 { name="astroFns"; version="4.1-0"; sha256="0g5q0y067xf1ah91b4lg8mr9imj0d6lgig7gbj3b69fn335k363g"; depends=[]; }; astrochron = derive2 { name="astrochron"; version="0.7"; sha256="12p4n530f4w4idadqidm6w38xdm119bipc63z34q3a2z5gmdd71b"; depends=[fields IDPmisc multitaper]; }; astrodatR = derive2 { name="astrodatR"; version="0.1"; sha256="00689px4znwmlp6qbj6z2a51b7ylx1yrrjpv6zjkvrwpv6lyj9fw"; depends=[]; }; astrolibR = derive2 { name="astrolibR"; version="0.1"; sha256="0gkgry5aiz29grp9vdq9zgg6ss47ql08nwcmz1pfvd0g0h9h75l8"; depends=[]; }; - astsa = derive2 { name="astsa"; version="1.7"; sha256="1rzl1ayzv8lnn2009j4v667pp8sxdbn7qbqqyjpq00c75f4wss6x"; depends=[MASS]; }; + astsa = derive2 { name="astsa"; version="1.8"; sha256="023nk6chyy79scjzhv42px5cpym7rnm1c55ylcslyjdmlr5i6afk"; depends=[]; }; asus = derive2 { name="asus"; version="1.0.0"; sha256="16hp8xajb631a5amm1cvhzq8z4cwh1vjiavv3n11fzpxyskhmfrb"; depends=[rwt wavethresh]; }; asymLD = derive2 { name="asymLD"; version="0.1"; sha256="1q05pxwn6arpalspgf2m0cym4ivnwyv94i58k9kaihd37kvm5lgc"; depends=[]; }; - asymmetry = derive2 { name="asymmetry"; version="1.2.4"; sha256="0c2a4d8ryb1d1vw465n3rq7w9j9sidqbigqxv43b8f0wbsr0q6h1"; depends=[gplots rJava smacof]; }; + asymmetry = derive2 { name="asymmetry"; version="1.2.5"; sha256="0wsmarmij4crhv5wr4mqibsf787cy7fmmp4xrclsb3gm3g1xwvzz"; depends=[gplots rJava smacof]; }; asympTest = derive2 { name="asympTest"; version="0.1.3"; sha256="11nlkgws3y8xbz3yli55414a2rkk7367q9q5r2ssa61jaiimibhh"; depends=[]; }; asypow = derive2 { name="asypow"; version="2015.6.25"; sha256="0il38djkmw5ka7czpalmhq6yycx7flpdpgbd7p5nx52rsjdv49mj"; depends=[]; }; atlantistools = derive2 { name="atlantistools"; version="0.4.3"; sha256="06rb0c4ralx55mdlqwpjzim0inxif4cdi9732v4h1ll8jhlm5v7d"; depends=[circlize dplyr ggplot2 gridExtra lazyeval magrittr proj4 purrr RColorBrewer RNetCDF rvest scales stringr tibble tidyr xml2]; }; atmcmc = derive2 { name="atmcmc"; version="1.0"; sha256="05k69b5wlysz3kh0yiqvshgvr0nyz34zkvn6bjs30cwz7s9j21pn"; depends=[]; }; - atsd = derive2 { name="atsd"; version="1.0.8441"; sha256="1jz2bdgvk1wamrm8r9ygprhyf0z3mdk9c1pwlb4bfmwvbnqd0yqa"; depends=[httr RCurl]; }; + atsd = derive2 { name="atsd"; version="1.2.0"; sha256="0jan8r5f2r3l2xpdf9rrv4smkr2l645rfdgdfjb1xa54jd3pqvqs"; depends=[httr RCurl]; }; + attempt = derive2 { name="attempt"; version="0.2.0"; sha256="1i3y39qzk1bpg1m8f3v8bhigdcklv00ypy93npbh8lyhq4w8lk3v"; depends=[rlang]; }; attrCUSUM = derive2 { name="attrCUSUM"; version="0.1.0"; sha256="113y40v9hyvnvvzvyqg81n0n1h84pj4zph5q8p0vc0384hw00544"; depends=[Rcpp RcppArmadillo]; }; attribrisk = derive2 { name="attribrisk"; version="0.1"; sha256="1zqx53mxz2hh9jyanf3jkadgpj44jbqrk4p13fas91zvhpw9pn5s"; depends=[boot survival]; }; atus = derive2 { name="atus"; version="0.1"; sha256="15arijdfyci43k0a32zc8qmm73fmzrr3ghhxw0kgipdr3w5xcmz3"; depends=[]; }; auRoc = derive2 { name="auRoc"; version="0.1-0"; sha256="1ijk127p6g5mzc7b4b9lnjnfzvklz3g8w6bckrdahlw7djd9mgz1"; depends=[coda MBESS ProbYX rjags]; }; - aucm = derive2 { name="aucm"; version="2017.3-2"; sha256="124rb1lhssvmlzkzb5h6hc5plv0hk7wkid53cbd28nxx1grp2wwm"; depends=[kyotil]; }; + aucm = derive2 { name="aucm"; version="2018.1-24"; sha256="0x10dawlwxqywjl7mxc2gpp2r4wnd7pb6n80xlrb9yywm7zbb6x2"; depends=[kyotil]; }; auctestr = derive2 { name="auctestr"; version="1.0.0"; sha256="15b1x0c9yhl91gir7jmivp8vxzc8q7wvb0mgam9454avc6l29x4y"; depends=[dplyr tidyr]; }; audio = derive2 { name="audio"; version="0.1-5"; sha256="1hv4052n2r6jkzkilhkfsk4dj1xhbgk4bhba2ca9nf8ag92jkqml"; depends=[]; }; audiolyzR = derive2 { name="audiolyzR"; version="0.4-9"; sha256="09jsrjy15vcn6da0kgk06ghayyrf3s853gqv8qdawg745ky2hbgi"; depends=[hexbin plotrix RJSONIO]; }; @@ -4222,9 +4318,10 @@ in with self; { automagic = derive2 { name="automagic"; version="0.3"; sha256="0yzv0ianfq217jvz7rba86bcmxh09p513khvq6jk5k7isblvn0qd"; depends=[devtools dplyr formatR githubinstall knitr magrittr pacman purrr remotes yaml]; }; automap = derive2 { name="automap"; version="1.0-14"; sha256="1190kbmp0x80x0hyifdbblb4ijq79kvrfn9rkp5k6diig4v30n0w"; depends=[gstat lattice reshape sp]; }; automultinomial = derive2 { name="automultinomial"; version="1.0.0"; sha256="15cxnqaai2dln6jvk7lpfqvlpv5237zn18axp459p5zxcgg0lw88"; depends=[Hmisc igraph MASS Matrix]; }; + autoplotly = derive2 { name="autoplotly"; version="0.1.1"; sha256="1pm1760dd9p0h66q7y1v9icfhz1lk6i5akjda06jc2f0rq7mzlj0"; depends=[ggfortify ggplot2 plotly]; }; autopls = derive2 { name="autopls"; version="1.3"; sha256="1qf5gk1vsz1p5670w7bgzh3b15wvrx1gy6ih4sivw0vj8bcjxbw9"; depends=[pls]; }; - autothresholdr = derive2 { name="autothresholdr"; version="0.6.0"; sha256="1m3nz094czxx8sdnpww47qrh4g8g9lk97g9vs95v7al34whlq8xd"; depends=[EBImage magrittr Rcpp rJava RSAGA]; }; - autovarCore = derive2 { name="autovarCore"; version="1.0-0"; sha256="08h51bh1m3d47nprd5z7v3k3lkrixbxwinr73zd5442wskf4x82v"; depends=[Amelia jsonlite Rcpp urca vars]; }; + autothresholdr = derive2 { name="autothresholdr"; version="1.1.2"; sha256="0gkab2fnavjfb7h2fd2jbk5phz10hc18kf3l6r2zvvmq3gfhh2db"; depends=[checkmate ijtiff magrittr Rcpp RSAGA]; }; + autovarCore = derive2 { name="autovarCore"; version="1.0-2"; sha256="0yvz3nn792xdam8hgnkdrhcyaf9idp0shb1s0yfj1xigknlinn9n"; depends=[Amelia jsonlite Rcpp urca vars]; }; available = derive2 { name="available"; version="1.0.0"; sha256="0w4i0ajw0p71k717v8hg9d8az08m8yl97w5lly87kli36p7mv30h"; depends=[cli clisymbols crayon desc glue jsonlite memoise purrr SnowballC stringdist tibble tidytext udapi yesno]; }; averisk = derive2 { name="averisk"; version="1.0.3"; sha256="02j27d4jxgy2bk5sgxp1xdfyqr321civs99qj0g8cp34gwqk0j3m"; depends=[MASS]; }; aws = derive2 { name="aws"; version="1.9-6"; sha256="0mfq44pji0p6d7s1wbwi0f97lsh3f33wnj8fiyimpg9fv8lr4inz"; depends=[awsMethods gsl]; }; @@ -4239,13 +4336,13 @@ in with self; { aws_signature = derive2 { name="aws.signature"; version="0.3.5"; sha256="1ijzdxv46x5iydmhgbri4lfpdhhlhz1ybhwwdcy4m4mjz9s74yhk"; depends=[base64enc digest]; }; aws_sns = derive2 { name="aws.sns"; version="0.1.7"; sha256="0i8nn5jnykhsjwn4nsqdqbagankjc09zs8and54rkirdigzdny8v"; depends=[aws_signature httr jsonlite xml2]; }; aws_sqs = derive2 { name="aws.sqs"; version="0.1.10"; sha256="09sh3injb4kfrq5al7hmbnqdn5v5hnjkqqsz86vpi4154435ymdg"; depends=[aws_signature httr jsonlite xml2]; }; - awsMethods = derive2 { name="awsMethods"; version="1.0-4"; sha256="0n4mxn9fkqkvv19mfaqhrmhwhmkxiahfnls47b5ki3a3gsr6cm8l"; depends=[]; }; + awsMethods = derive2 { name="awsMethods"; version="1.1-0"; sha256="1xywcadpjyzlw5f2k9sbr8fvrj3kcr1r6swi23lc952yrl3gvpkl"; depends=[]; }; awsjavasdk = derive2 { name="awsjavasdk"; version="0.2.0"; sha256="1461h565il4y68g0a3k7wgn9jyb6pys8405f780ldg6g44aa7p60"; depends=[assertthat R_utils rappdirs rJava]; }; awspack = derive2 { name="awspack"; version="0.1.6"; sha256="0pf6g9w2r2rm887sa3v0gfwia2w2q94m40m76sq66gb3spkmngd5"; depends=[aws_alexa aws_cloudtrail aws_ec2metadata aws_iam aws_lambda aws_polly aws_s3 aws_ses aws_signature aws_sns aws_sqs]; }; aylmer = derive2 { name="aylmer"; version="1.0-11"; sha256="1b6dryvfz9yp00nj8lv8j1isnshcgwn9fx41knah9pw7dn4pxkk2"; depends=[Brobdingnag]; }; b6e6rl = derive2 { name="b6e6rl"; version="1.1"; sha256="17scdskn677vaxx1h2jypqaffvjgczryplg17nr3wigi1x0cxg7a"; depends=[]; }; bPeaks = derive2 { name="bPeaks"; version="1.2"; sha256="1z6jghcmw0lwv17ms7gdp5zzimaawq3ahbwkxa4062g373592smd"; depends=[]; }; - bReeze = derive2 { name="bReeze"; version="0.4-1"; sha256="113giw1aw6b5h0h5794p2p7zrwqz38mn9ihhpca7r8g7w74kpsdi"; depends=[]; }; + bReeze = derive2 { name="bReeze"; version="0.4-2"; sha256="04zapsxb4lsi85m9qgrsm49yasf0b8wk0djdpa7xks4hjvmskfhq"; depends=[]; }; bWGR = derive2 { name="bWGR"; version="1.5"; sha256="0pa7g5dnnakgxzial0xf03pvmcfplx40cdfvmmyv2fcjrq2d85jd"; depends=[Rcpp]; }; babar = derive2 { name="babar"; version="1.0"; sha256="13j5klrcnd4dwrgdbxlvwcj56l9mzi4j9ga6jj5i04pgdc6vsfx5"; depends=[]; }; babel = derive2 { name="babel"; version="0.3-0"; sha256="1iwvx69051yhlxbcl6bypvc3mcih0q8bf3i29r3i79356hp12xqa"; depends=[edgeR]; }; @@ -4253,9 +4350,8 @@ in with self; { backShift = derive2 { name="backShift"; version="0.1.4.2"; sha256="1nj7mcdpzfzq68qg86rrys752gzw69n99yyb0jzg6r8qrgpcxj49"; depends=[clue ggplot2 igraph MASS matrixcalc mvnmle reshape2]; }; backblazer = derive2 { name="backblazer"; version="0.1.0"; sha256="020kdydksm0brnxsa00blf5sylxd4hz49wmngk1x1fx43kdlyc41"; depends=[httr jsonlite openssl]; }; backpipe = derive2 { name="backpipe"; version="0.1.8.1"; sha256="1nid5rbgwiq8axkrl2gwl4vr5bjq5k5nrhq7macddvijcn3r2dz8"; depends=[]; }; - backports = derive2 { name="backports"; version="1.1.1"; sha256="15w8psmv203wzijrk4hvwaw3i4byh2m5s09yrkqwhfckhaj82kj9"; depends=[]; }; + backports = derive2 { name="backports"; version="1.1.2"; sha256="0mml9h3xagi7144pyb3jj9zbh9qzns7izkhdg7df20v7bikr6nz8"; depends=[]; }; backtest = derive2 { name="backtest"; version="0.3-4"; sha256="1s0mf247dz2vvyf4m3sp9xiqhv7xcs4rphyg9gdcy73060sah2ad"; depends=[lattice]; }; - backtestGraphics = derive2 { name="backtestGraphics"; version="0.1.6"; sha256="14l9dbkbcx4kl45kpjbq4ihzf47j859khhd1db40vnp8x57g9xcx"; depends=[dplyr dygraphs scales shiny xts]; }; bacr = derive2 { name="bacr"; version="1.0.1"; sha256="14zr1v4rihx0ra3x0vsb81vsz0g8gzskkdxkg7nhiz835hp2fiy8"; depends=[MCMCpack]; }; badgecreatr = derive2 { name="badgecreatr"; version="0.1.0"; sha256="070zb5jw817s9ykqc3dvzjqk48612gydkdc31svc0ji01s1y1545"; depends=[stringr]; }; badger = derive2 { name="badger"; version="0.0.2"; sha256="15qnb0a6rqsf1dbb1cf9ag2z5f4zhf8b8psxbsdhh42qrg8g3mma"; depends=[dlstats rvcheck]; }; @@ -4280,44 +4376,44 @@ in with self; { base64enc = derive2 { name="base64enc"; version="0.1-3"; sha256="13b89fhg1nx7zds82a0biz847ixphg9byf5zl2cw9kab6s56v1bd"; depends=[]; }; base64url = derive2 { name="base64url"; version="1.2"; sha256="1dmpb6cyabs6fqnbwshyws107p961203wic7his6zywsn9axymfc"; depends=[backports]; }; baseballDBR = derive2 { name="baseballDBR"; version="0.1.2"; sha256="0w54g1avcqamc12lmvjchlqbqck9jfjccm441k03nsql460mpydq"; depends=[dplyr magrittr rvest xml2]; }; - basefun = derive2 { name="basefun"; version="0.0-38"; sha256="17g37p73ym42vmnjrfv1lzfxvi7y03ji42w5mb2wdngd2ynd5cb2"; depends=[Matrix orthopolynom polynom variables]; }; + basefun = derive2 { name="basefun"; version="0.0-39"; sha256="1ylp9x2k275y30k2p7rljmwq0lfj7vb36d1fh4lvmaazci9dqz6c"; depends=[Matrix orthopolynom polynom variables]; }; baseline = derive2 { name="baseline"; version="1.2-1"; sha256="1vk0vf8p080ainhv09fjwfspqckr0123qlzb9dadqk2601bsivgy"; depends=[SparseM]; }; + basicTrendline = derive2 { name="basicTrendline"; version="1.0.1"; sha256="0rsmlp70ylpkqv437jcy3skwbfkj4xwkpjb2q79b9n8kw2ir0716"; depends=[]; }; + basicspace = derive2 { name="basicspace"; version="0.20"; sha256="0nyljk8ydasirgv7ijxplyhk10s8m9k3rw5qmgf0z81dm7p257wc"; depends=[]; }; basictabler = derive2 { name="basictabler"; version="0.1.0"; sha256="1m4cgghfh3aixsnwjlbaj3prnnqxhij60bakz9vdr5dvnqg92an9"; depends=[dplyr htmltools htmlwidgets jsonlite R6]; }; bastah = derive2 { name="bastah"; version="1.0.7"; sha256="08xdba16wj0inp0kq2sbcrdr6wj8bwlq7rqnfrzjrz03wxhc5bk0"; depends=[BigQuic foreach glmnet lars MASS Matrix scalreg]; }; batade = derive2 { name="batade"; version="0.1"; sha256="1lr0j20iydh15l6gbn471vzbwh29n58dlpv9bcx1mnsqqnsgpmal"; depends=[hwriter]; }; batch = derive2 { name="batch"; version="1.1-4"; sha256="03v8a1hsjs6nfgmhdsv6fhy3af2vahc67wsk71wrvdxwslmn669q"; depends=[]; }; batchmeans = derive2 { name="batchmeans"; version="1.0-3"; sha256="1qkdljngvlahk0pbrkarkjh2g4sxxwiva9f3m5y8gz8pjw9fpy9n"; depends=[]; }; - batchtools = derive2 { name="batchtools"; version="0.9.7"; sha256="1fpb142kdw478gvsawvipfcgmm75xz5wlcxjfgz692i50inlb13j"; depends=[backports base64url brew checkmate data_table digest progress R6 rappdirs stringi withr]; }; + batchtools = derive2 { name="batchtools"; version="0.9.8"; sha256="1ch03hj8ahkfc9sr4gv985s6zzxk5xm2dbm0hm8xjygkqkd8r5n9"; depends=[backports base64url brew checkmate data_table digest progress R6 rappdirs stringi withr]; }; batman = derive2 { name="batman"; version="0.1.0"; sha256="0ccgx506p4iri23k2ikb8jmh04dp08w66785bv52iy8kd359h43f"; depends=[Rcpp]; }; batteryreduction = derive2 { name="batteryreduction"; version="0.1.1"; sha256="0j838q7063bplkzd50kmnxji80cgysfsq7m1qifv8z7a2zsh8c8g"; depends=[pracma]; }; bayesAB = derive2 { name="bayesAB"; version="1.1.0"; sha256="0g74n6jvpmb2sbmywcagb10rk8sd3pxzkw9s8s6qpg34q58v01a6"; depends=[ggplot2 Rcpp]; }; bayesCL = derive2 { name="bayesCL"; version="0.0.1"; sha256="1l278lxidn16nma2ny14wjajcqyzbr6j5xl2lj08cic26c7hvjbm"; depends=[]; }; - bayesDP = derive2 { name="bayesDP"; version="1.2.2"; sha256="0lfw3mnk6kgpzg0h0r54k5dndgpbsb2i2q59qwsm6k14nz1b5n5j"; depends=[ggplot2 Rcpp RcppArmadillo survival]; }; + bayesDP = derive2 { name="bayesDP"; version="1.3.0"; sha256="1g7d64brln5p2gindc18jk4wqmh6phqr4zhs8jhl0yk9g4jhsqzn"; depends=[ggplot2 Rcpp RcppArmadillo survival]; }; bayesDccGarch = derive2 { name="bayesDccGarch"; version="2.0"; sha256="1s2b8f43wi9ja966n2p2r4l4s79vk6xb8mqaxsagnw90g969p681"; depends=[coda numDeriv]; }; bayesDem = derive2 { name="bayesDem"; version="2.5-1"; sha256="1cxrqil1p692mbzkcj1fvsx335qyy6c1y43mq48s4shs1hhc69bn"; depends=[bayesLife bayesPop bayesTFR gWidgets gWidgetsRGtk2 RGtk2 wpp2015]; }; bayesGARCH = derive2 { name="bayesGARCH"; version="2.1.3"; sha256="1480mmzfshchfbfh3x420cq5qblfh59jkl21hkq2jvnwppksdn9w"; depends=[coda mvtnorm]; }; bayesGDS = derive2 { name="bayesGDS"; version="0.6.2"; sha256="0ash16hmassn76x3f59dfvp4plqp8vb17qzcwmag7vi3mi3y2ap6"; depends=[Matrix]; }; - bayesImageS = derive2 { name="bayesImageS"; version="0.4-1"; sha256="1s5fs35mkc1xg15a593ga7251ib7ipl0fkpfk5mrbd01dkrqn15g"; depends=[Rcpp RcppArmadillo]; }; + bayesImageS = derive2 { name="bayesImageS"; version="0.5-1"; sha256="1p4l3i57xm8yrczdiz4nxmd8qv0pv0chlrpvndfn3fnjbcx2cfa2"; depends=[Rcpp RcppArmadillo]; }; bayesLife = derive2 { name="bayesLife"; version="3.2-0"; sha256="1a3x3y77542hgndvymhnyg6dys0s5rimkgprl8psflsgsrxnbmcv"; depends=[bayesTFR car coda hett wpp2017]; }; - bayesLopod = derive2 { name="bayesLopod"; version="1.0.0"; sha256="1kn3pqplbxk8vgyw8yy4p3xcdi57yd2ms0a7wz3w7jfgx334a7d9"; depends=[BH ggplot2 inline raster Rcpp RcppEigen rgeos rstan rstantools slam sp StanHeaders]; }; - bayesMCClust = derive2 { name="bayesMCClust"; version="1.0"; sha256="14cyvcyx3nmkbvsy7n4xjp7zvcgdhy013dv9d72y8j5dvlv82pb4"; depends=[bayesm boa e1071 gplots gtools MASS mnormt xtable]; }; + bayesLopod = derive2 { name="bayesLopod"; version="1.0.1"; sha256="0v9yy75mvr74jc0fz10qj1acwxjy0lbqkdqaj1hn88v294r9dw3q"; depends=[BH inline raster Rcpp RcppEigen rgeos rstan rstantools slam sp StanHeaders]; }; bayesPop = derive2 { name="bayesPop"; version="6.2-3"; sha256="1znjf8mihip0dl7dyk8h3nbkzihz8lnf7kxvhf1l363v449s0bff"; depends=[abind bayesLife bayesTFR fields googleVis plyr reshape2 rworldmap wpp2012 wpp2017]; }; bayesQR = derive2 { name="bayesQR"; version="2.3"; sha256="1c6y7r9h9626ghp68pl5k1g0l95fwd6dp0jfznmhy53qza0ny8z4"; depends=[]; }; - bayesSurv = derive2 { name="bayesSurv"; version="3.1"; sha256="1dbk9bi4l5m5hmn10i7qm3ypb5y91dxr7b01xvrb2wpn6i1s9h7n"; depends=[coda smoothSurv survival]; }; - bayesTFR = derive2 { name="bayesTFR"; version="6.1-1"; sha256="12f3s1k7jalaqd3hxhlrn2i6nvzsmcgv5k1jfhbmk7py5b7ybj2p"; depends=[coda MASS mvtnorm wpp2017]; }; + bayesSurv = derive2 { name="bayesSurv"; version="3.2"; sha256="1zp302pfi64nnqdiqldvfi1lm0wv2dplz5sfjp0ydl1qc16z0axp"; depends=[coda smoothSurv survival]; }; + bayesTFR = derive2 { name="bayesTFR"; version="6.1-2"; sha256="092sl8xk82kybpp0v06j0dxh4zal0d6j2na42ghl2ri36iy6wqvx"; depends=[coda MASS mvtnorm wpp2017]; }; bayesbio = derive2 { name="bayesbio"; version="1.0.0"; sha256="08qa4lzkrcwin7n3kzfqfdlnlqahdmjl1lxpdh29n780cgyjfvs0"; depends=[]; }; bayesboot = derive2 { name="bayesboot"; version="0.2.1"; sha256="0gd3in9z8kx3d29dvyd8blmhlc7wxxl5b2hxnrrq0w13jcnsn57w"; depends=[HDInterval plyr]; }; bayescount = derive2 { name="bayescount"; version="0.9.99-5"; sha256="0c2b54768wn72mk297va3k244256xlsis9cd6zn6q5n1l7ispj6j"; depends=[coda rjags runjags]; }; bayesianETAS = derive2 { name="bayesianETAS"; version="1.0.3"; sha256="0nbif0b6lcik2kh948zg5ska5mvkdsfr0dg8ndnfpscm2mp7y1dg"; depends=[]; }; - bayeslm = derive2 { name="bayeslm"; version="0.5.0"; sha256="0i57l9rbffl050yxiyg2x0pdivnk6bvympspwvkr3aayaaxhsqyh"; depends=[coda Rcpp RcppArmadillo]; }; + bayeslm = derive2 { name="bayeslm"; version="0.6.0"; sha256="1pdkrmmlk9wbkw5mmqg43g31kpfnaxks6p5xasv1vf617wc9hj7b"; depends=[coda Rcpp RcppArmadillo RcppParallel]; }; bayesloglin = derive2 { name="bayesloglin"; version="1.0.1"; sha256="0j2ziahf6mwsz2gvb1azvdzlmszlpqgr5zqcqa68pxgq947sa2cs"; depends=[igraph]; }; bayeslongitudinal = derive2 { name="bayeslongitudinal"; version="0.1.0"; sha256="0g45ikpnbry1albb3asrzab5z3sy98yf74c64qn02d65xgafifwg"; depends=[LearnBayes MASS mvtnorm]; }; bayesm = derive2 { name="bayesm"; version="3.1-0.1"; sha256="04b4s8clxrmdyhnhd2arnsdi992422yam3z91w6dzrmngwxq4yaq"; depends=[Rcpp RcppArmadillo]; }; - bayesmeta = derive2 { name="bayesmeta"; version="2.0"; sha256="0789c63dxhj9hag0gz819dfrddvx68218liak6hqa9df2yd9dzwn"; depends=[forestplot]; }; + bayesmeta = derive2 { name="bayesmeta"; version="2.1"; sha256="02aw7fgvdsnqasmvljh1pd5nks1hjys7n3kmlwnkr5a6w476v1q9"; depends=[forestplot metafor]; }; bayesmix = derive2 { name="bayesmix"; version="0.7-4"; sha256="1qms1nnk2nq3gqr8zf2b9ri4wv8jrxv5i8s087k1rwdvya3k5r9a"; depends=[coda rjags]; }; bayesplot = derive2 { name="bayesplot"; version="1.4.0"; sha256="0izp2v734n4pcdlfjrhasl2srlnhccsf93ni6hfhl5l5xyf02043"; depends=[dplyr ggplot2 reshape2 rlang]; }; bayespref = derive2 { name="bayespref"; version="1.0"; sha256="0gwlzs7qkgmf90np7xv85d27jjqggyhfj00vpya664a2znyjb3jm"; depends=[coda lattice MASS MCMCpack RColorBrewer]; }; - bayesreg = derive2 { name="bayesreg"; version="1.0"; sha256="0crld04cxxqw0xq2d4rdv040iq7vchwjbzacj0z8jv245hwgr9qy"; depends=[BayesLogit]; }; bayess = derive2 { name="bayess"; version="1.4"; sha256="0axipk5hn2hw3g4dfh7y3xa0dxqmi8kqpbr77nl14y7ydpija6xm"; depends=[combinat gplots MASS mnormt]; }; bayou = derive2 { name="bayou"; version="1.1.0"; sha256="1ndd7lygphngvn4a432616f6anmhxbdzmkksrhpl76xvrw5agwkc"; depends=[ape coda denstrip fitdistrplus foreach geiger MASS mnormt phytools Rcpp RcppArmadillo]; }; bazar = derive2 { name="bazar"; version="1.0.6"; sha256="12b1x218x1yh9iadv8ciyncr841s0arvj4pbn74bryhcgbvmbwqm"; depends=[kimisc]; }; @@ -4325,33 +4421,34 @@ in with self; { bbemkr = derive2 { name="bbemkr"; version="2.0"; sha256="015c57s8mpimm82nddnh382wlkisxgdmc2hvp7k38pcnqxc5gb5q"; depends=[MASS]; }; bbmle = derive2 { name="bbmle"; version="1.0.20"; sha256="1xzij7swrrzl5ly8l3lw6awh486zcm00251dwqws1y23fbgyh3vc"; depends=[lattice MASS numDeriv]; }; bbo = derive2 { name="bbo"; version="0.2"; sha256="19xrbla3bb3csg3gjjrpkgyr379zfwyh293bcrcd6j8rnm6g4i01"; depends=[]; }; + bbw = derive2 { name="bbw"; version="0.1.3"; sha256="1z3an561qh0rfi3jhh1ghsdbg8aimqmf4hpqri2jz39in3p0gwg4"; depends=[car]; }; bc3net = derive2 { name="bc3net"; version="1.0.4"; sha256="15dghd0v1s71h77iw8b49v5h7wcda5mb4540lfyibsdipbashv2h"; depends=[c3net igraph infotheo lattice Matrix]; }; bcROCsurface = derive2 { name="bcROCsurface"; version="1.0-2"; sha256="0v1zjbgpalr5ag97s9rxcd2z0r7qpw8yhc4lw4p4i3xkw2paf5zh"; depends=[boot nnet Rcpp RcppArmadillo rgl]; }; bcRep = derive2 { name="bcRep"; version="1.3.6"; sha256="1fibx11ykkkjv4sgg6zc2a0g270384z2cf68hwghnld0wi002b5z"; depends=[ape doParallel foreach gplots ineq plotrix proxy stringdist vegan]; }; bclust = derive2 { name="bclust"; version="1.5"; sha256="01kx02azj26b6swly53zhf3sny6c6jglkxnzylsc0pvri89x7yj2"; depends=[]; }; + bcmaps = derive2 { name="bcmaps"; version="0.17.0"; sha256="18rn9zlagp5f0268m8azcbl52jcyx33jjxaqpg05cz853fxib24h"; depends=[httr rappdirs sf]; }; bcp = derive2 { name="bcp"; version="4.0.0"; sha256="1bkd7812jacyk955l71b2szpc9550p0hpv3x337qgl09zck4vdgm"; depends=[Rcpp RcppArmadillo]; }; bcpa = derive2 { name="bcpa"; version="1.1"; sha256="0rwbd39szp0ar9nli2rswhjiwil31zgl7lnwm9phd0qjv8q0ppar"; depends=[plyr Rcpp]; }; bcpmeta = derive2 { name="bcpmeta"; version="1.0"; sha256="02fw1qz9cvr7pvmcng7qg7p04wxxpmvb2s8p78f52w4bf694iqhl"; depends=[mvtnorm]; }; - bcrm = derive2 { name="bcrm"; version="0.4.6"; sha256="1nqa7kd83h8gh6bb5lbd17m1hgv8vjlbbq8w0i1fgmadz7y5rpji"; depends=[ggplot2 mvtnorm]; }; - bcrypt = derive2 { name="bcrypt"; version="1.0"; sha256="12qlad4rb5zjj7ilcj11zhiir9jvp8hciz7f7viwk2m6jpl0dl2b"; depends=[openssl]; }; - bcs = derive2 { name="bcs"; version="1.0.0"; sha256="0wv7kfcr6i36ik8v3prwp4mrwg1x6vf5nmybq9a57fz66pf1ff1x"; depends=[fda Rcpp RcppArmadillo wmtsa]; }; + bcrm = derive2 { name="bcrm"; version="0.4.7"; sha256="0s0xmmphrrsqnrsnnsqh9ska6afl4jyk0s0290w6askrlqdzjgil"; depends=[ggplot2 mvtnorm]; }; + bcrypt = derive2 { name="bcrypt"; version="1.1"; sha256="1wwdin8x09y8n8zrwj1ylh5ikcz0v0la4wmrsvbdr61cg336wzx4"; depends=[openssl]; }; bcv = derive2 { name="bcv"; version="1.0.1"; sha256="0yqcfariw9sw0b8cpljcr7vf5rf0cwr1wbif23icchfaxk2m42gj"; depends=[]; }; - bda = derive2 { name="bda"; version="5.1.6"; sha256="0rpxvmjbqiph8hpzsvlj8q6h70jsc9771fiq7l3lmkz69jn1gf4q"; depends=[]; }; + bda = derive2 { name="bda"; version="10.1.9"; sha256="06ycxqjpnsywakjkjxf1czhxsbdzbpwa11m69gad5538z066d24x"; depends=[]; }; bde = derive2 { name="bde"; version="1.0.1"; sha256="1f25gmjfl58x4pns89abfk85yq5aad3bgq9yqpv505g5gxk62d3v"; depends=[ggplot2 shiny]; }; bdlp = derive2 { name="bdlp"; version="0.9-1"; sha256="1ydb5hsaj1bfdz7hcdkc74qlk608kf0xrbpw247klkxrhsh9ba2p"; depends=[DBI GenOrd MASS MultiOrd rgl RSQLite stringdist]; }; bdots = derive2 { name="bdots"; version="0.1.15"; sha256="1a665f9f18wajf4y6jp17icg9w6wx698xfnlry2sm5pq6nrkmwln"; depends=[doParallel doRNG foreach mvtnorm nlme]; }; bdpopt = derive2 { name="bdpopt"; version="1.0-1"; sha256="1z7mdqklw3frsdzyhvx8s8wvblwm28fr1gca2yrivqjng0r47lx4"; depends=[coda rjags]; }; bdpv = derive2 { name="bdpv"; version="1.1"; sha256="0i6wdf27243ch8pn2chqriwxjg3g72wbvzlx52mz4ahw700xjc7n"; depends=[]; }; - bdrift = derive2 { name="bdrift"; version="1.2.2"; sha256="03vwiyvxv174l0sy76gp2x8lwjf3s45zxzwrlbn97hg9c3j9adjm"; depends=[Quandl quantmod scales xts zoo]; }; bdscale = derive2 { name="bdscale"; version="2.0.0"; sha256="1hkkfd69g2bg2y4hicjs6bnw9f0zw74jy0dpadchnzw17lffpms3"; depends=[ggplot2 scales]; }; - bdsmatrix = derive2 { name="bdsmatrix"; version="1.3-2"; sha256="16qhfwk0r1snm9hg32qwz7hizkpwc32m723hjm23m2026gvz2nwy"; depends=[]; }; - bdvis = derive2 { name="bdvis"; version="0.2.18"; sha256="0m1nxq6bjinagmbkixkqdyx9s4vwggcihb33aqpixlm6vqcf7wyh"; depends=[chron ggplot2 lattice leafletR maps plotrix plyr sqldf taxize treemap]; }; + bdsmatrix = derive2 { name="bdsmatrix"; version="1.3-3"; sha256="17ddvz4gnih7rx0lr1gzk280xyh6x796cf2x794dvplpiiq83skh"; depends=[]; }; + bdvis = derive2 { name="bdvis"; version="0.2.20"; sha256="1iif70s17d9nh6bylm9s0ky70qx441n56h953gz4hxp7rb5dly31"; depends=[chron ggplot2 lattice leafletR maps plotrix plyr sqldf taxize treemap]; }; bdynsys = derive2 { name="bdynsys"; version="1.3"; sha256="07gfyp0qwq9y1cnh7lhcz7q0b1s51cjwlbpll50l2cza2dszmf29"; depends=[caTools deSolve Formula Hmisc MASS matrixStats plm pracma]; }; - bea_R = derive2 { name="bea.R"; version="1.0.2"; sha256="0zh5gaplkwp3mq0dpj6avjlgxbni05mzbh782kb230754nshr27h"; depends=[chron colorspace data_table DT ggplot2 googleVis gtable htmltools htmlwidgets httpuv httr jsonlite magrittr munsell plyr Rcpp scales shiny shinydashboard stringi stringr xtable yaml]; }; + bea_R = derive2 { name="bea.R"; version="1.0.4"; sha256="16y2hgw9pi849hz6c280wj53ncbq442szp27kp9jpr21iy827298"; depends=[chron colorspace data_table DT ggplot2 googleVis gtable htmltools htmlwidgets httpuv httr jsonlite magrittr munsell plyr Rcpp scales shiny shinydashboard stringi stringr xtable yaml]; }; beadarrayFilter = derive2 { name="beadarrayFilter"; version="1.1.0"; sha256="044dq5irc00v2f2gjz0vb69w7q7b84lppc55ganabdv4f0dxdblc"; depends=[beadarray RColorBrewer]; }; beadarrayMSV = derive2 { name="beadarrayMSV"; version="1.1.0"; sha256="0785vmjsli37hjyppk7hlqmn0b683s1apysx9dghbw4h6rgvr8n9"; depends=[Biobase geneplotter limma rggobi]; }; beanplot = derive2 { name="beanplot"; version="1.2"; sha256="0wmkr704fl8kdxkjwmaxw2a2h5dwzfgsgpncnk2p2wd4768jknj9"; depends=[]; }; beanz = derive2 { name="beanz"; version="2.1"; sha256="0lnjaka2cmkgc7id8njclmmkjb22v6gz9bkncq5n6zidawrczqp0"; depends=[BH loo Rcpp RcppEigen rstan StanHeaders survival]; }; + beast = derive2 { name="beast"; version="1.0"; sha256="1j4afp8cm6psxqidanvcfqrz6zy1klkzjkm7ia5w5qlvgll2micz"; depends=[RColorBrewer]; }; bedr = derive2 { name="bedr"; version="1.0.4"; sha256="052sn90gjr34hjgyndzvcl66pv22q0kjqbx95y1pdydiwhwmhpa3"; depends=[data_table R_utils testthat VennDiagram yaml]; }; beepr = derive2 { name="beepr"; version="1.2"; sha256="0w4szy3rgj1bdcanxbcb9agyw38jqp0hc7qsn7j9700vh20zqbln"; depends=[audio stringr]; }; beeswarm = derive2 { name="beeswarm"; version="0.2.3"; sha256="0hy89bwv7jixlg91li1fywa77916am2whqp1m1fx1khd45g44581"; depends=[]; }; @@ -4367,7 +4464,7 @@ in with self; { benthos = derive2 { name="benthos"; version="1.3-4"; sha256="015p9wxykr2g29r95wdslw1d2klc9ps4wznjrv1rxm5mazdbb2wv"; depends=[dplyr lazyeval readr]; }; ber = derive2 { name="ber"; version="4.0"; sha256="0gl7rms92qpa5ksn8h3ppykmxk5lzbcs13kf2sjiy0r2535n8ydi"; depends=[MASS]; }; berryFunctions = derive2 { name="berryFunctions"; version="1.16.3"; sha256="0bwqp999niakmihhj4wp9q63bg4mr4gsygxzss0dl276q7ma8x5i"; depends=[abind]; }; - bestNormalize = derive2 { name="bestNormalize"; version="0.2.2"; sha256="1rmmnfym6cz2rfy7f235vpfhgdnf9xm44wsll5y319bqm1llq176"; depends=[LambertW nortest]; }; + bestNormalize = derive2 { name="bestNormalize"; version="1.0.1"; sha256="0mlvaa35nsp19154g894xvfd6wg99lwxnfissf8yykwfl7fb265x"; depends=[LambertW nortest]; }; bestglm = derive2 { name="bestglm"; version="0.36"; sha256="1das1qnczgw46hrjplfhw00wqjd8gxqsdr9s4zmc3k8qlzhb3ych"; depends=[glmnet grpreg lattice leaps]; }; betacal = derive2 { name="betacal"; version="0.1.0"; sha256="19wgpgf9yhckl9qx9v24f4yh055wfalphcxwm7lg68px6ap2pxl9"; depends=[]; }; betafam = derive2 { name="betafam"; version="1.0"; sha256="1nf5509alqnr5qpva36f1wb7rdnc084p170h91jv89xvzsidqxca"; depends=[]; }; @@ -4382,16 +4479,15 @@ in with self; { bezier = derive2 { name="bezier"; version="1.1"; sha256="1bhqf1zbshkf1x8mgqp4mkgdxk9jxi51xj6i47kqkyn9gbdzch0c"; depends=[]; }; bfa = derive2 { name="bfa"; version="0.4"; sha256="08n6446xl2w8z0rsqi6v2hp9cp744frxw6vrbxg5cpybhyyfzr36"; depends=[coda Rcpp RcppArmadillo]; }; bfast = derive2 { name="bfast"; version="1.5.7"; sha256="0n75minka55rxpvs3qkj0c65ydn1gc3i8lkr2gdyn1adjkl5yn01"; depends=[forecast raster sp strucchange zoo]; }; - bfp = derive2 { name="bfp"; version="0.0-35"; sha256="13jfbzijg087sva45bxzdnpz16l51mbszzh443nad23lym0w4bfg"; depends=[Rcpp]; }; + bfp = derive2 { name="bfp"; version="0.0-38"; sha256="117rr680jjfn2xksqwhy7sx03cf5444jdgr9dzlr3bcc6pcxslx2"; depends=[Rcpp]; }; bgeva = derive2 { name="bgeva"; version="0.3-1"; sha256="0qm4xknyab8hdyn3in2hsvm8s062cnmqqf41b5jvax1mi5hs0z8c"; depends=[magic mgcv trust]; }; bglm = derive2 { name="bglm"; version="1.0"; sha256="1ln5clsfhpzjkm6cjil0lfqg687b0xxbvw1hcvangc0c0s314mrz"; depends=[mvtnorm]; }; bgmfiles = derive2 { name="bgmfiles"; version="0.0.6"; sha256="10qldfjjq5fx5jrrakdxc8k2pf0vp8ifg18nq56lvx9n28mqigim"; depends=[]; }; bgmm = derive2 { name="bgmm"; version="1.8.3"; sha256="09hsqjjyzlpl0fqb7832j5ydrr0yc42zb1c9q1y5hbrms7yp00p8"; depends=[car combinat lattice mvtnorm]; }; bgsmtr = derive2 { name="bgsmtr"; version="0.1"; sha256="09h118msqf9yl2z7d6dsvgn4vrvy43ynznajj58k7gkxdlm1nimg"; depends=[coda EDISON Matrix mnormt mvtnorm sparseMVN statmod]; }; - bhm = derive2 { name="bhm"; version="1.11"; sha256="1d35fvwk8v8b2x1knhsk5rz48hc5k9lkrxqd6y8p0gn63k5iy5ag"; depends=[coda survival]; }; + bhm = derive2 { name="bhm"; version="1.13"; sha256="1iq1hjc7xn2kmmxgzv6mzcvvf48kqp5b8lavmzrqykak3v4z02nz"; depends=[coda survival]; }; biasbetareg = derive2 { name="biasbetareg"; version="1.0"; sha256="1562zdin0y5mrp36ih11ir3h9cv49cx1l98chxd89fkj8x3c1fbg"; depends=[betareg]; }; - bib2df = derive2 { name="bib2df"; version="1.0.0"; sha256="0qhhv23lr5ya3jhqrx4x5zx3bl0mrjlwd8i30lbinl7hlz50ahgr"; depends=[dplyr httr humaniformat stringr]; }; - bibliometrix = derive2 { name="bibliometrix"; version="1.8"; sha256="1wzdyymmzikbkr41mw5s3srsvzh4zww8657r8i60dnf8dajgcryj"; depends=[factoextra FactoMineR ggplot2 igraph Matrix RColorBrewer rscopus SnowballC stringdist stringr]; }; + bibliometrix = derive2 { name="bibliometrix"; version="1.9"; sha256="1yzdbh5h3fvc6agr551g9n10mlr72cbsrw9mpigfhxb953wvda54"; depends=[factoextra FactoMineR ggplot2 igraph Matrix RColorBrewer RISmed rscopus SnowballC stringdist stringr]; }; bibliospec = derive2 { name="bibliospec"; version="0.0.4"; sha256="0abrbaw2knnlh8g5r4c2i6cc7a6ilfxry8zhscrx0x58irmp790b"; depends=[DBI RSQLite]; }; bibtex = derive2 { name="bibtex"; version="0.4.2"; sha256="0wl3925ryd54g1nv3ncwllc493d39dpgy5md61940h69c0van1hz"; depends=[stringr]; }; biclique = derive2 { name="biclique"; version="1.0.1"; sha256="0wxvqjxc11ccvfnlnnb6gv6r74a48pg3yabsjynrg1m2kbynnqjf"; depends=[]; }; @@ -4408,67 +4504,66 @@ in with self; { biganalytics = derive2 { name="biganalytics"; version="1.1.14"; sha256="1hsqdg5hkhs6z9pwvn055q02hzpksjwrf33q5zdnkm387g188ca6"; depends=[BH biglm bigmemory foreach Rcpp]; }; biglars = derive2 { name="biglars"; version="1.0.2"; sha256="17zs25dvlja9ynx2fm5f4nmgkx4mnyqs5iscwsyahr6qigx1rz9x"; depends=[ff]; }; biglasso = derive2 { name="biglasso"; version="1.3-6"; sha256="044l2l34l4pl7ijwgq569cn8x5clj795qpfwb1b9qfwvggvgzgni"; depends=[BH bigmemory Matrix ncvreg Rcpp RcppArmadillo]; }; + bigleaf = derive2 { name="bigleaf"; version="0.3.0"; sha256="1y1z9hi23w0n374jvndr0prry7msp6lfzkwzdr7ivpi89af0h027"; depends=[robustbase]; }; biglm = derive2 { name="biglm"; version="0.9-1"; sha256="1z7h4by457z93k5i6qf5rq7xmd1y2kcd1rq4pv465cd32d4mb2g1"; depends=[DBI]; }; - bigmemory = derive2 { name="bigmemory"; version="4.5.31"; sha256="0wv0p746zz5a6r1yd0fgpj2kfcyzk2f4rxqz92p6lp9jzakv4lfs"; depends=[BH bigmemory_sri Rcpp]; }; + bigmemory = derive2 { name="bigmemory"; version="4.5.33"; sha256="0ycl9dzm3drpyas625h34rir5bnbjlncxlvawfsfmqwcbmwdjdvj"; depends=[BH bigmemory_sri Rcpp]; }; bigmemory_sri = derive2 { name="bigmemory.sri"; version="0.1.3"; sha256="0mg14ilwdkd64q2ri9jdwnk7mp55dqim7xfifrs65sdsv1934h2m"; depends=[]; }; bigml = derive2 { name="bigml"; version="0.1.2"; sha256="0vl5krjbgckknxwl26b2hn63jhb80zbn7abpckhxzxfxzncpnfz9"; depends=[plyr RCurl RJSONIO]; }; bigpca = derive2 { name="bigpca"; version="1.1"; sha256="09rd8ryar8wiih50s6b246jf0idmi62fsi7ljysx7j0jarj3jyhz"; depends=[biganalytics bigmemory bigmemory_sri irlba NCmisc reader]; }; bigrquery = derive2 { name="bigrquery"; version="0.4.1"; sha256="07hi5z8l2qm9cjfc9y1y5vjijkkwmxq1dgz3bvv578kasz6yjs11"; depends=[assertthat DBI httr jsonlite progress readr]; }; bigsplines = derive2 { name="bigsplines"; version="1.1-0"; sha256="0jjlv9qidn8xrz630wbyq7kz7vlxgaphv2y2siv90j01j5nj4s89"; depends=[quadprog]; }; - bigstatsr = derive2 { name="bigstatsr"; version="0.2.2"; sha256="0x46csllfdiyr0krsiicvlcdkafh114r6iv71barah3sfib6rash"; depends=[BH cowplot doParallel foreach ggplot2 glue magrittr Matrix Rcpp RcppArmadillo RSpectra]; }; bigstep = derive2 { name="bigstep"; version="0.7.4"; sha256="0g45fgnamdv1v3b8xvpsj4rzhisyvbbddwyzvzvmmi4a8w20pzn5"; depends=[bigmemory matrixStats R_utils RcppEigen speedglm]; }; bigtabulate = derive2 { name="bigtabulate"; version="1.1.5"; sha256="1jvp3m0ms2cav9z8vvhh80gsa0kvc351brv2jq99rxv1mwvpa4xj"; depends=[BH biganalytics bigmemory Rcpp]; }; - bigtcr = derive2 { name="bigtcr"; version="1.0"; sha256="1wh85r6f4jd8xzinczr5g1p1acbcyn4am3v1n4blfbn447l9nx4z"; depends=[]; }; + bigtcr = derive2 { name="bigtcr"; version="1.1"; sha256="1l03yc28afdm7glbw4ay0zsywjgqg5l90qz1hfhslsy8gg7d5wq5"; depends=[]; }; bigtime = derive2 { name="bigtime"; version="0.1.0"; sha256="136gy2i4qwa2drklllyzp3z0dbijlavgf3sxy73bf84df2yq1c9i"; depends=[corrplot lattice MASS Rcpp RcppArmadillo RcppEigen zoo]; }; bikedata = derive2 { name="bikedata"; version="0.1.0"; sha256="1vhjk8gbip4p6x0i4qw1m3wzic40v6qkj50zm6l44qgqcjkj699m"; depends=[BH DBI dodgr httr lubridate magrittr Rcpp reshape2 RSQLite tibble xml2]; }; bikeshare14 = derive2 { name="bikeshare14"; version="0.1.0"; sha256="12399c01s8p9rmpi3fpy4rm7xxnsf627slz3h234frbahhs882c4"; depends=[]; }; bild = derive2 { name="bild"; version="1.1-5"; sha256="03has1zi57inicahl52ja006vv5cdndyxfsxp77l6nc3zc6ixna8"; depends=[]; }; billboard = derive2 { name="billboard"; version="0.1.0"; sha256="1z3y8dijhc1381y91n5zq305xzm1gpvs0g4mdpfr7zrblpa8ws39"; depends=[tibble]; }; - billboarder = derive2 { name="billboarder"; version="0.1.0"; sha256="0apcjjwbhc0jd9li27dcjnjm2lswg0w4axcm9zgbhwj7na5mqrka"; depends=[ggplot2 htmlwidgets jsonlite magrittr]; }; + billboarder = derive2 { name="billboarder"; version="0.2.1"; sha256="0xmkj6l3cpyyq23hp6jhfqllpg7gkksajnq25wyccqmypxjik8jv"; depends=[ggplot2 htmlwidgets jsonlite magrittr scales]; }; bimetallic = derive2 { name="bimetallic"; version="1.0"; sha256="181qi4dr0zc7x6wziq7jdc1his20jmprfpq3hrfm56fr5n1sj8wl"; depends=[]; }; bimixt = derive2 { name="bimixt"; version="1.0"; sha256="0nhszpzjqy8z3vngl5jdzqxzshnn92wgi0ci5n3n5kzi24xkfrzc"; depends=[pROC]; }; binGroup = derive2 { name="binGroup"; version="1.1-0"; sha256="1sf7prg2x1ryynf1kz7jr50svmga7kjgd5pi9qm3g2hyimz8mvs4"; depends=[]; }; binMto = derive2 { name="binMto"; version="0.0-6"; sha256="1h9s42wk848x15f4glhsh2iikpra64miwlia6xz5dqlzbs4vw86k"; depends=[mvtnorm]; }; binaryGP = derive2 { name="binaryGP"; version="0.2"; sha256="0i4xi0gxk0lamjdygyx0azdp3kfqmva1g20nl3p65w4yx77m88d6"; depends=[GPfit lhs logitnorm nloptr Rcpp RcppArmadillo]; }; - binaryLogic = derive2 { name="binaryLogic"; version="0.3.5"; sha256="1zaqwkrr1dyxsbfa3zvz1ciipmqddl932jkw9r00qmnhdh3ybpa6"; depends=[]; }; + binaryLogic = derive2 { name="binaryLogic"; version="0.3.9"; sha256="19ig9qgjjnivfihjy41pc13qlrb95679mmk4zks5lbbri8qi4qxj"; depends=[]; }; binda = derive2 { name="binda"; version="1.0.3"; sha256="15rhxnlif7agblzd09gyllkqkf5d8cc75b4vmp7grx8a6y7w47g0"; depends=[entropy]; }; bindata = derive2 { name="bindata"; version="0.9-19"; sha256="15ya21fz1kvq4qsppkn9ypiqvaq8q4vszdcgcymampa7zc07z2ld"; depends=[e1071 mvtnorm]; }; bindr = derive2 { name="bindr"; version="0.1"; sha256="0d95ifm0x4mrfzi20xf39f5pzd7rfzqsld0vjqf6xzga5rhnd8fc"; depends=[]; }; bindrcpp = derive2 { name="bindrcpp"; version="0.2"; sha256="0l1l22zl87wiyl79m3gj2vlxmkhxvrkl4alhyy08h55q7hqs3vyh"; depends=[bindr plogr Rcpp]; }; - binequality = derive2 { name="binequality"; version="1.0.2"; sha256="09gafmz77qbyci8ih8zag3l8a92qij8nyr8hw57ymcvnzafq5iad"; depends=[gamlss gamlss_cens gamlss_dist ineq survival]; }; + binequality = derive2 { name="binequality"; version="1.0.3"; sha256="0hhcmw1mq785zylcxghfnazi3xvnl7sqpqll8fqdk064a4drqkw1"; depends=[gamlss gamlss_cens gamlss_dist ineq survival]; }; binford = derive2 { name="binford"; version="0.1.0"; sha256="04mpdvynlm4gddybys04k0446gc9hyq0vaxr6a525p76ls5aw4b1"; depends=[]; }; bingat = derive2 { name="bingat"; version="1.3"; sha256="1y68rgafipfad78yrzcygdszgy1d5q739kap06pzr78bn3i8hiwa"; depends=[doParallel foreach gplots matrixStats network vegan]; }; binhf = derive2 { name="binhf"; version="1.0-1"; sha256="0l8925bj6mjv2y7fn76zh2g8xjig3kbbdy4jl0ip3gd9kbrakl9k"; depends=[adlift wavethresh]; }; binman = derive2 { name="binman"; version="0.1.0"; sha256="103f74gm124vw4rwbfrd5dlgca3v83kqd8m5j9z3ma3snh788mkx"; depends=[assertthat httr jsonlite rappdirs semver xml2 yaml]; }; + binnednp = derive2 { name="binnednp"; version="0.1.0"; sha256="0cfgz6828b2525dmph5n4zxdgkbx0nsrm4k2azhw1xfi3pz4z6ga"; depends=[fitdistrplus kedd mclust nor1mix Rcpp Rdpack]; }; binom = derive2 { name="binom"; version="1.1-1"; sha256="0mjj92dqf5q69jxzqya4izb1mly3mkydbnmlm4wb3zqqg82a324c"; depends=[]; }; binomSamSize = derive2 { name="binomSamSize"; version="0.1-5"; sha256="1an6dcqsjh5r0w4kc3n6yfvvha5qhrb2i4bpf7g5ykhl3i60zfcc"; depends=[binom]; }; - binomTools = derive2 { name="binomTools"; version="1.0-1"; sha256="14594i7iapd6hy4j36yb88xmrbmczg8zgbs0b6k0adnmqf83bn4v"; depends=[]; }; binomen = derive2 { name="binomen"; version="0.1.2"; sha256="0w1m5b2qvq3g28hahfgkq7wrrjqy43x1x4kvrrrf284s5ka90531"; depends=[dplyr jsonlite lazyeval]; }; binomialcftp = derive2 { name="binomialcftp"; version="1.0"; sha256="00c7ymlxk1xnx3x1814x7bcyir7q5sy4rb82dcpzf2bdly4xa1qr"; depends=[]; }; binomlogit = derive2 { name="binomlogit"; version="1.2"; sha256="1njz1g9sciwa8q6h0zd8iw45vg3i1fwcvicj5y8srpk8wqw3qp7k"; depends=[]; }; binr = derive2 { name="binr"; version="1.1"; sha256="0kgk91zy7bdrhpkh9c5bi206y9hjwjwzb508i8qqmznqyxmza70r"; depends=[]; }; binseqtest = derive2 { name="binseqtest"; version="1.0.3"; sha256="0661a2bqmv6bckq23c6m04ggwrp8z10lfgjg9dgkz4bfxsd297gs"; depends=[clinfun]; }; binsmooth = derive2 { name="binsmooth"; version="0.1.0"; sha256="1zlw4zmkckg7rwf4hx8wyr2yl644xkdkazayysy99saysr9pk2c9"; depends=[ineq pracma triangle]; }; - binst = derive2 { name="binst"; version="0.2.0"; sha256="13hg9kmxlaczbkbimlqphpimzx67kncc6qvnlk9cxqyvfkb0ph47"; depends=[]; }; + binst = derive2 { name="binst"; version="0.2.1"; sha256="09kzk7n1j9nzgyijwirzk33z6p6hc67zkd05hv1i9qfijy31gci4"; depends=[rpart]; }; bio_infer = derive2 { name="bio.infer"; version="1.3-3"; sha256="14pdv6yk0sk6v8g9p6bazbp7mr3wmxgfi6p6dj9n77lhqlvjcgm9"; depends=[]; }; bio3d = derive2 { name="bio3d"; version="2.3-3"; sha256="0cw6nhkj5mxh89lfrnhrmv0rwxkmh05g6nd6rvd7ahcaxd3mid7l"; depends=[Rcpp]; }; bioOED = derive2 { name="bioOED"; version="0.1.1"; sha256="18b66s5dn8a67iwb0g1bmbi856ip81yfa57m40kf7phsga52ncg1"; depends=[bioinactivation corrplot dplyr FME ggplot2 MEIGOR]; }; bioPN = derive2 { name="bioPN"; version="1.2.0"; sha256="0mvqgsfc7d4h6npgg728chyp5jcsf49xhnq8cgjxfzmdayr1fwr8"; depends=[]; }; biofiles = derive2 { name="biofiles"; version="1.0.0"; sha256="1bglgl2jcp6jy3f7xwndil56i98xx4kn518s3fqdixw7n5ibmqd2"; depends=[assertthat BiocGenerics Biostrings foreach GenomeInfoDb GenomicRanges IRanges iterators Rcpp RCurl reutils S4Vectors XVector]; }; - biogas = derive2 { name="biogas"; version="1.8.1"; sha256="1q10q6mk8qzf6an52qhlps61zv8vwy0lcx3128zyn8p6b98ymy8d"; depends=[]; }; + biogas = derive2 { name="biogas"; version="1.10.0"; sha256="1il4r71h2a0xqpjs7q97ypdd12jmdnh0kqcs6j5gpjxdsmgnhlsy"; depends=[]; }; biogeo = derive2 { name="biogeo"; version="1.0"; sha256="14sqgg8b06gp5dajxvyj9s3ndsk7jpkfr0mkyl2l61kgp6qx53rh"; depends=[maptools raster sp stringr vegan]; }; biogram = derive2 { name="biogram"; version="1.4"; sha256="1kkim6dxmvvpby2ir280adl14jmrz7nsib3m8g2ki81d539km6il"; depends=[bit combinat entropy partitions slam]; }; bioimagetools = derive2 { name="bioimagetools"; version="1.1.0"; sha256="0ws99rx7bhqi448qqy08jsl3c4vbq96gigqb85yv1mzrc82sg62p"; depends=[EBImage httr tiff]; }; - bioinactivation = derive2 { name="bioinactivation"; version="1.2.0"; sha256="149sh5m05xda6wq1ki3xfs9vp3vc9bpm9f5szf43kmzrzm92qjgn"; depends=[deSolve dplyr FME ggplot2 lazyeval MASS rlang]; }; - biolink = derive2 { name="biolink"; version="0.1.2"; sha256="12hpd50swnij9jzc8m6bz7iwmndgwmlyj7vnd8hvnz1gc68bjs2p"; depends=[memoise rentrez xml2]; }; - biomartr = derive2 { name="biomartr"; version="0.5.2"; sha256="1q1zizfixi7rcbigxmi1vk271b704z5lxnzph9cqa3zwsv1clfxb"; depends=[biomaRt Biostrings curl data_table downloader dplyr httr jsonlite RCurl readr stringr tibble XML]; }; + bioinactivation = derive2 { name="bioinactivation"; version="1.2.1"; sha256="1dxpa549y6dqzmi8nk57x0blqmcz51v9hj0sy3g9laj9aj0rmyzz"; depends=[deSolve dplyr FME ggplot2 lazyeval MASS rlang]; }; + biolink = derive2 { name="biolink"; version="0.1.3"; sha256="0cy9s9wg5rgwczqjfw6xp9ragqcj9gzp7icpm0nqwrdghsj7azjv"; depends=[DBI glue memoise rentrez RMySQL xml2]; }; + biomartr = derive2 { name="biomartr"; version="0.7.0"; sha256="1gjl4xh9ryxsf3lhn4fqa3zw10yc0mwrfgkrbq117njsw988kms7"; depends=[biomaRt Biostrings curl data_table downloader dplyr httr jsonlite purrr RCurl readr stringr tibble XML]; }; biomod2 = derive2 { name="biomod2"; version="3.3-7"; sha256="0mbf6j4m7vvq82l1grmznfqirj1ynr6jzzlpx0s2wjd3hdbvgzia"; depends=[abind dismo earth gbm ggplot2 MASS maxent mda nnet PresenceAbsence pROC randomForest raster rasterVis reshape rpart sp]; }; bionetdata = derive2 { name="bionetdata"; version="1.0.1"; sha256="1l362zxgcvxln47b1vc46ad6ww8ibwhqr2myxnz1dnk2a8nj7r2q"; depends=[]; }; bioplots = derive2 { name="bioplots"; version="0.0.1"; sha256="184wp1jvgf7a80srrfq72a4r1la2psr8b16kxs00v2gcbgjyvr10"; depends=[ggplot2 gplots RColorBrewer reshape2]; }; - biorxivr = derive2 { name="biorxivr"; version="0.1.3"; sha256="1vi035c4jld5i52xnp79dn5642308cv11vfrw0n62wlsbjfbdma4"; depends=[XML]; }; bios2mds = derive2 { name="bios2mds"; version="1.2.2"; sha256="1avzkbk91b7ifjba5zby5r2yw5mibf2wv05a4nj27gwxfwrr21cd"; depends=[amap cluster e1071 rgl scales]; }; bioset = derive2 { name="bioset"; version="0.2.0"; sha256="1cv4sgmbvxghwa22qwvgp5zgbfcyhljsh6c6k7gakxsv0wz1xq46"; depends=[dplyr magrittr rlang tibble tidyr]; }; - biosignalEMG = derive2 { name="biosignalEMG"; version="2.0.1"; sha256="1prdr0pa1vd190pqxr7y87sjy10icfj9wb7jc3r5q8qmk5lpnyq5"; depends=[signal]; }; + biosignalEMG = derive2 { name="biosignalEMG"; version="2.1.0"; sha256="0bbkrfqkmks4z8c7rh0k43lvm71vn3fzrw3kpj012ym77whwkvay"; depends=[signal]; }; biospear = derive2 { name="biospear"; version="1.0.1"; sha256="03wsyzlxmqff6xvr10jy49p229xr6jjvr8kk93wm7wil7q6b7z42"; depends=[cobs corpcor devtools glmnet grplasso MASS Matrix mboost pkgconfig plsRcox pROC PRROC RCurl survAUC survival]; }; biotic = derive2 { name="biotic"; version="0.1.2"; sha256="1p18jkdd263dgk90626n9awkj6m4zn1n7897596fzrzrahksa978"; depends=[]; }; biotools = derive2 { name="biotools"; version="3.1"; sha256="15y3ccmj1gslzc0lp0gvc66hf0yigx3zkqnw46crgrizjm2kmjay"; depends=[boot lattice MASS rpanel SpatialEpi tkrplot]; }; @@ -4486,14 +4581,13 @@ in with self; { bitrugs = derive2 { name="bitrugs"; version="0.1"; sha256="0sqgp05b902mdldr4ckz4knmkbsqvgl1vx0l792cn2r437yqlgp3"; depends=[]; }; bivarRIpower = derive2 { name="bivarRIpower"; version="1.2"; sha256="0vgi0476rwali6k8bkp317jawzq5pf04v75xmycpmadb7drnpzy0"; depends=[]; }; bivrp = derive2 { name="bivrp"; version="1.0"; sha256="0q00k24fssvjkgpndg84vdm7w9hswq593k6yjha4pl0a8bmnv6f8"; depends=[MASS]; }; - biwavelet = derive2 { name="biwavelet"; version="0.20.11"; sha256="0fmk4b8gzbq0l4n08zq4pl1csaxxxi3hpqd886ccbhmg6zn8dz01"; depends=[fields foreach Rcpp]; }; biwt = derive2 { name="biwt"; version="1.0"; sha256="1mb3x8ky3x8j4n8d859i7byyjyfzq035i674b2dmdca6mn7paa14"; depends=[MASS rrcov]; }; bizdays = derive2 { name="bizdays"; version="1.0.4"; sha256="0vl9anlwvnnaiz67h256r386gy57fbbygjahsjaiaw8zrp84fj3p"; depends=[]; }; bkmr = derive2 { name="bkmr"; version="0.2.0"; sha256="0dk6dn73bqlvwinn3aginls4533931xcr3h59k0w60yxs3v8yakv"; depends=[dplyr fields magrittr MASS nlme tidyr tmvtnorm truncnorm]; }; blackbox = derive2 { name="blackbox"; version="1.1.7"; sha256="1qdj6wsgr623wnhc573krnhjx65d4k9y8i3n2l2lj1qpqd538ygw"; depends=[geometry lattice MASS nloptr numDeriv proxy rcdd Rcpp RcppEigen spaMM]; }; blandr = derive2 { name="blandr"; version="0.4.3"; sha256="03w1k646izbrygcsynrzrph7crpqdqn58544mmm9zxfvkmsilpmi"; depends=[ggplot2 knitr]; }; blastula = derive2 { name="blastula"; version="0.1"; sha256="0i306x0xm34r9fz7iq8frjbcvfbgg64fm5nn7mbk29a58kn91axp"; depends=[commonmark ggplot2 glue htmltools httr knitr magrittr mailR rJava stringr]; }; - blavaan = derive2 { name="blavaan"; version="0.2-4"; sha256="1bjczm5i9q1h3i1sl5p31jv87hi9bj4b546fi4g338ljqqrzx6a5"; depends=[coda lavaan loo MASS MCMCpack mnormt nonnest2 runjags]; }; + blavaan = derive2 { name="blavaan"; version="0.3-1"; sha256="1r5kararl5d8fk6zlawhyjpi1sc3xp1pd2cf83qmh9wbvdsfphwg"; depends=[coda lavaan loo MASS MCMCpack mnormt nonnest2 runjags]; }; blendedLink = derive2 { name="blendedLink"; version="1.0"; sha256="19d1pnjag89jjvkl5a6wx531qjqp4cv5jk95md6jby27yr52r8vp"; depends=[]; }; blender = derive2 { name="blender"; version="0.1.2"; sha256="1qqkfgf7fzwcz88a43cqr8bw86qda33f18dg3rv1k77gpjqr999c"; depends=[vegan]; }; blighty = derive2 { name="blighty"; version="3.1-4"; sha256="1fkz3vfcnciy6rfybddcp5j744dcsdpmf7cln2jky0krag8pjzpn"; depends=[]; }; @@ -4505,14 +4599,14 @@ in with self; { blmeco = derive2 { name="blmeco"; version="1.1"; sha256="1hzg5dimzj1khygm9dv0y30mx1nf9vdhgicqdg1rvj7nf426h2ki"; depends=[arm lme4 MASS MuMIn]; }; blob = derive2 { name="blob"; version="1.1.0"; sha256="05pazzcyz3c3vd2l70zq9cf172cgjff4dnf419zigfnxycyn1mhn"; depends=[tibble]; }; blockTools = derive2 { name="blockTools"; version="0.6-3"; sha256="0023p0msfmp8swq4f5aff40m976np7y051x8hjizzw91hrfa4w2n"; depends=[MASS tibble]; }; - blockcluster = derive2 { name="blockcluster"; version="4.2.3"; sha256="1b3rqpg3i5bplz85lxfspb1vv8l7qsxwkalnn0h5pwy9ppqdbcb7"; depends=[Rcpp rtkore]; }; + blockcluster = derive2 { name="blockcluster"; version="4.2.6"; sha256="0dskcwdh89a24j1lr829p9rrs88l13738b1gvsmsqrcrg9z955xc"; depends=[Rcpp rtkore]; }; blockmatrix = derive2 { name="blockmatrix"; version="1.0"; sha256="14k69ly4i8pb8z59005kaf5rpv611kk1mk96q6piyn1gz1s6sk6r"; depends=[]; }; blockmodeling = derive2 { name="blockmodeling"; version="0.1.9"; sha256="1rd8ifwv5q9yl0ayzkgi0h4k79w3r46dr164l73iz1ny77a78fn9"; depends=[]; }; blockmodels = derive2 { name="blockmodels"; version="1.1.1"; sha256="088629i4g63m8rnqmrv50dgpqbnxd1a4zl5wr3ga0pdpqhmd53wp"; depends=[digest Rcpp RcppArmadillo]; }; blockrand = derive2 { name="blockrand"; version="1.3"; sha256="1090vb26w6s7iqjcal0xbb3qb6p6j46a5w25f1wjdppd1spvh7f9"; depends=[]; }; blocksdesign = derive2 { name="blocksdesign"; version="2.7"; sha256="0pkkp1i6dsj4q4p6529qkbyy8mqmw9zhs1ww1y55yn1adkkwfd4z"; depends=[crossdes]; }; blockseg = derive2 { name="blockseg"; version="0.2"; sha256="183hjb66589qqjwf14rzdmy770biad73r0l5pkh6f4xk9xac1r62"; depends=[ggplot2 Matrix Rcpp RcppArmadillo reshape2]; }; - blogdown = derive2 { name="blogdown"; version="0.3"; sha256="1m17j5nwckfrhi9gjzin814y3r74834393s6dych0jrvw5xjp3d0"; depends=[bookdown htmltools httpuv knitr rmarkdown servr yaml]; }; + blogdown = derive2 { name="blogdown"; version="0.5"; sha256="1i34vynvb496w638g0mip30vrxcx60nbr48g1nfkmgiw1nrvr8c5"; depends=[bookdown htmltools httpuv knitr rmarkdown servr xfun yaml]; }; blsAPI = derive2 { name="blsAPI"; version="0.1.9"; sha256="1p7s799kix396fbx8ap9vy9akwpaps37awr18qbj53n9qcm74wkp"; depends=[RCurl rjson]; }; blscrapeR = derive2 { name="blscrapeR"; version="3.1.1"; sha256="1s76d6511ifhh17dnwhrd8hzmfnb26qal68pn4v4smz35srgfa9j"; depends=[dplyr ggplot2 httr jsonlite magrittr purrr stringr tibble]; }; bmd = derive2 { name="bmd"; version="0.5"; sha256="0d4wxyymycb416sdn272292l70s1h2m5kv568vakx3rbvb8y6agy"; depends=[drc]; }; @@ -4520,28 +4614,30 @@ in with self; { bmeta = derive2 { name="bmeta"; version="0.1.2"; sha256="19pm60xpmlanngq4nbibp0n5m98xw24b2xghz92ly31i3mkg2n68"; depends=[forestplot R2jags]; }; bmixture = derive2 { name="bmixture"; version="0.5"; sha256="144nd1s18nyii135jfr2f65szyzw8hi4zg57z85dnmr2xwas22qb"; depends=[BDgraph]; }; bmk = derive2 { name="bmk"; version="1.0"; sha256="1wxkrlrhmsxsiraj8nyiax9bqs834ln2swykmpf40wxspkykgfdq"; depends=[coda functional plyr]; }; - bmlm = derive2 { name="bmlm"; version="1.3.4"; sha256="1d4gsriy5dm9yq8gdw8hz2k4fg8vsfchscfdygsq6h0wsbkch9xm"; depends=[BH ggplot2 Rcpp RcppEigen rstan StanHeaders]; }; + bmlm = derive2 { name="bmlm"; version="1.3.5"; sha256="091yjllx4kfngaam1ac8rxcx547k7s7qa75pb5350qkr096pvsvs"; depends=[BH ggplot2 Rcpp RcppEigen rstan StanHeaders]; }; bmmix = derive2 { name="bmmix"; version="0.1-2"; sha256="00php2pgpnm9n0mnamchi6a3dgaa97kdz2ynivrf38s0vca7fqx8"; depends=[ggplot2 reshape2]; }; + bmotif = derive2 { name="bmotif"; version="1.0.0"; sha256="1zjwlsimihszg8gg7mvvi8xmzvlsdph9x6524gb28jmd24xb4gwj"; depends=[tensor]; }; bmp = derive2 { name="bmp"; version="0.3"; sha256="0jd67r11bn98hjwgyr6gas423787xy7ji2hq7ay80blkkcj91xxx"; depends=[]; }; - bmrm = derive2 { name="bmrm"; version="3.4"; sha256="1588nz3h05sss94sa1d87v5si7p3316canxc2dbbdqgv51ds377w"; depends=[LowRankQP lpSolve matrixStats]; }; - bnclassify = derive2 { name="bnclassify"; version="0.3.3"; sha256="11c1sraxlz9sgyg6i257asmxx9pnf0qcblnjp0pwlh1r50h0z5wa"; depends=[assertthat entropy graph matrixStats RBGL rpart]; }; - bnlearn = derive2 { name="bnlearn"; version="4.2"; sha256="1k9zfz8sc3ikrxp513cjgxw6fgxx9knz3wv5nikpcjmmrvlvwqya"; depends=[]; }; + bmrm = derive2 { name="bmrm"; version="3.7"; sha256="1lv4bcjri95nh4yqcp9hd3ad90lcp2drh1dwfn99i3344yw196x2"; depends=[LowRankQP lpSolve matrixStats]; }; + bnclassify = derive2 { name="bnclassify"; version="0.3.4"; sha256="0gjca802l3lvxy1ri8qff51mrgzj8ng0lk97kb4harvrsqx3i1wi"; depends=[assertthat entropy graph matrixStats RBGL rpart]; }; + bnlearn = derive2 { name="bnlearn"; version="4.3"; sha256="11zp8vf79h5a6dyijazld199pzp1lsgk3x049ykgy0bqjx2ivfvq"; depends=[]; }; bnnSurvival = derive2 { name="bnnSurvival"; version="0.1.5"; sha256="1d9jmfx0id4lmw122zga7hb52vlfdfqn4amhzpsmhyck99rv92j4"; depends=[pec prodlim Rcpp]; }; bnormnlr = derive2 { name="bnormnlr"; version="1.0"; sha256="0l2r7vqikak47nr6spdzgjzhvmkr9dc61lfnxybmajvcyy6ymqs9"; depends=[mvtnorm numDeriv]; }; bnpmr = derive2 { name="bnpmr"; version="1.1"; sha256="0hvwkdbs2p2l0iw0425nca614qy3gsqfq4mifipy98yxxvgh8qgc"; depends=[]; }; + bnpsd = derive2 { name="bnpsd"; version="1.0.1"; sha256="0f9w3qcdmf6qx5k01vddmxj1vadx6d9zcgw6prpbmcf3cdy3fwg0"; depends=[]; }; bnspatial = derive2 { name="bnspatial"; version="1.0.3"; sha256="018rb5wacjk8igyc0qbp9rk3vjz3lffx81awlba8d2npiaxq6jbv"; depends=[doParallel foreach gRain gRbase raster]; }; bnstruct = derive2 { name="bnstruct"; version="1.0.2"; sha256="0n4gn1vhka694wdzignawyaca0rx2l0wjgw09fw42bkrswfjvxy1"; depends=[bitops igraph Matrix]; }; boa = derive2 { name="boa"; version="1.1.8-2"; sha256="04lhqk5qfvaz1jk90glr2yi5vq7cdy0w8m6g2lnzk359l9y41zhp"; depends=[]; }; - boclust = derive2 { name="boclust"; version="0.1.1"; sha256="1424w8714ymi81ipaf33mz8f2l3mqbqfskh0c67x0c5yf4kvrcw3"; depends=[d3heatmap DT genefilter ggplot2 psych reshape2 Rtsne shiny venn]; }; + boclust = derive2 { name="boclust"; version="0.1.2"; sha256="0p6wx053yrq5cff2djqc341pj9q550b870rngspdlbqb0m4k6lr4"; depends=[d3heatmap DT genefilter ggplot2 psych reshape2 Rtsne shiny venn]; }; bodenmiller = derive2 { name="bodenmiller"; version="0.1"; sha256="0gqrjscgq4qgk7yl32w0965yscc1py9klr49s8q8hkzyihlwzim2"; depends=[]; }; boilerpipeR = derive2 { name="boilerpipeR"; version="1.3"; sha256="0467bjqhdmi3p02fp0r7rgm00x9ry464f2hniav990qzsw8i16q6"; depends=[rJava]; }; bold = derive2 { name="bold"; version="0.5.0"; sha256="0gdmb3zsspcp594d32yzqhdpw4dwg7a3pfm7kgbghz368yw662gl"; depends=[crul data_table jsonlite plyr reshape stringr tibble xml2]; }; - bomrang = derive2 { name="bomrang"; version="0.0.8"; sha256="0125h2wnp2h5izv2fxshs25vvvml6na5d9w994m6vndnlhvzb6rz"; depends=[curl data_table dplyr foreign httr janitor jsonlite magrittr rappdirs raster readr rgdal rlang rvest tidyr xml2]; }; - bookdown = derive2 { name="bookdown"; version="0.5"; sha256="0zm63kr4f4kja4qpwkzl119zzyciqj7ihajfqgfjpgb4dzaiycxp"; depends=[htmltools knitr rmarkdown yaml]; }; + bomrang = derive2 { name="bomrang"; version="0.1.1"; sha256="1r1k8ridclmlsbrwlrjh7syw4fy3q1hf2rpi2xssh7gg2n709cjb"; depends=[curl data_table dplyr foreign hoardr httr janitor jsonlite magrittr raster readr rgdal rvest tidyr xml2]; }; + bookdown = derive2 { name="bookdown"; version="0.7"; sha256="1b3fw1f41zph5yw3kynb47aijq53vhaa6mnnvxly72zamyzdf95q"; depends=[htmltools knitr rmarkdown tinytex xfun yaml]; }; bookdownplus = derive2 { name="bookdownplus"; version="1.3.2"; sha256="0vkivgjfmqy2xfs75w8ylkpgcvca294q61jrhbpg24vnll3c281n"; depends=[bookdown knitr yaml]; }; boolean3 = derive2 { name="boolean3"; version="3.1.6"; sha256="00s6ljhqy8gpwa3kxfnm500r528iml53q364bjcl4dli2x85wa9p"; depends=[lattice mvtnorm numDeriv optimx rgenoud rlecuyer]; }; boostSeq = derive2 { name="boostSeq"; version="1.0"; sha256="0sikyzhn1i6f6n7jnk1kb82j0x72rj8g5cimp2qx3fxz33i0asx6"; depends=[genetics lpSolveAPI]; }; - boostmtree = derive2 { name="boostmtree"; version="1.2.0"; sha256="0sn22imcq8w9c1347d1pd680xlkh47s687100y6mh3xrwa1x5nsj"; depends=[nlme randomForestSRC]; }; + boostmtree = derive2 { name="boostmtree"; version="1.2.1"; sha256="0k79zfkck1plcd51sk6i8n5qh7hpnhchkqqhjn460hf0rl2mcjab"; depends=[nlme randomForestSRC]; }; boostr = derive2 { name="boostr"; version="1.0.0"; sha256="123ag8m042i1dhd4i5pqayqxbkfdj4z0kq2fyhxfy92a7550gib2"; depends=[foreach iterators stringr]; }; boot = derive2 { name="boot"; version="1.3-20"; sha256="0ai1qpm0p4z07xr0dvag8sdn9jrxcwanrsk9khzmww094jvr1jxd"; depends=[]; }; bootES = derive2 { name="bootES"; version="1.2"; sha256="0hcaw1v80zspdsy4wr464lmgq33807i2f6n2dc3r7qqwa80g4zz0"; depends=[boot]; }; @@ -4552,15 +4648,15 @@ in with self; { bootcluster = derive2 { name="bootcluster"; version="0.1.0"; sha256="1mx08p0csz06mq55bdg4vgnqa9khdgqrz4jnm48c24pg8rpaj98b"; depends=[cluster flexclust fpc mclust plyr sets]; }; bootnet = derive2 { name="bootnet"; version="1.0.1"; sha256="1r5kbcycdlb8g4zs5vsrmcxl20a6x2kj47ybz6h1s83rqiylxg1b"; depends=[abind corpcor dplyr ggplot2 gtools huge igraph IsingFit IsingSampler Matrix mgm mvtnorm parcor qgraph relaimpo tidyr]; }; bootruin = derive2 { name="bootruin"; version="1.2-4"; sha256="1gbvh99snchipf13kjhymcx60s2kni23y7lv8lhzd3d402grp68h"; depends=[]; }; - bootsPLS = derive2 { name="bootsPLS"; version="1.0.3"; sha256="0jkpci97chbvlfkcbbj3gm2dnj5aiwfrh739kd4fa0zra4ac1adh"; depends=[mixOmics]; }; + bootsPLS = derive2 { name="bootsPLS"; version="1.1.1"; sha256="0ypffscbv7l13kwbgvz18smfass49sqrmivnbb84qiq91wr5frnm"; depends=[mixOmics]; }; bootspecdens = derive2 { name="bootspecdens"; version="3.0"; sha256="0hnxhfsc3ac4153lrjlxan8xi4sg1glwb5947ps6pkkyhixm0kc1"; depends=[MASS]; }; bootstrap = derive2 { name="bootstrap"; version="2017.2"; sha256="08lmsy7k8wsgv89yc904c6fidcymr1ma2ry4fl0p69p21v4iiwa4"; depends=[]; }; boottol = derive2 { name="boottol"; version="2.0"; sha256="01dps9rifzrlfm4lvi7w99phfi87b7khx940kpsr4m9s168a2dzv"; depends=[boot plyr]; }; - boral = derive2 { name="boral"; version="1.4"; sha256="1risn5f48l5rmrx5pyifbrcbh92v94siqlwwiz2jljnhgsqgc1d4"; depends=[abind coda fishMod MASS mvtnorm R2jags]; }; + boral = derive2 { name="boral"; version="1.5"; sha256="1h1vf4j8p1vmhhqsrrn8jn0gynxjvkykm7f4jpsiivkfh69b0w95"; depends=[abind coda fishMod MASS mvtnorm R2jags]; }; bossMaps = derive2 { name="bossMaps"; version="0.1.0"; sha256="0w4ks1xicvfm8ari4fr18wjm0qj2nxdsapl6lpfjz8l1id0y78cg"; depends=[doParallel foreach ggplot2 raster rgdal rgeos scales sp tidyr]; }; boussinesq = derive2 { name="boussinesq"; version="1.0.3"; sha256="1j1jarc3j5rby1wvj1raj779c1ka5w68z7v3q8xhzjcaccrjhzxk"; depends=[]; }; - boxcoxmix = derive2 { name="boxcoxmix"; version="0.14"; sha256="06an4ci3iz2mlc7zhhjj7w10w10q8312lca1sv00m64bad4nxlnx"; depends=[qicharts statmod]; }; - boxoffice = derive2 { name="boxoffice"; version="0.1.1"; sha256="19l65nxrj0q7vr5ds6cwf7ynaqzd3ivzx673svvl6wmxlgn67cfi"; depends=[foreach lubridate rvest xml2]; }; + boxcoxmix = derive2 { name="boxcoxmix"; version="0.15"; sha256="0qvlk3kcvqzrak2rvf41fs8421fpfh3ch51rq0c9ac62x2dkfidh"; depends=[qicharts statmod]; }; + boxoffice = derive2 { name="boxoffice"; version="1.0.1"; sha256="0s8zx6n203l2cszq4xrwvazpw1fl36g1cln8n9sh20vyqrdcbgvh"; depends=[rvest xml2]; }; boxplotdbl = derive2 { name="boxplotdbl"; version="1.2.2"; sha256="01bvp6vjnlhc4lndxwd705bzlsh7zq0i9v66mxszrcz6v8hb9rwi"; depends=[]; }; boxr = derive2 { name="boxr"; version="0.3.4"; sha256="0wx3x65rk1ma8bw5h4yskr7ii95ynkm7il22l1bj34kv9f4bfyj3"; depends=[assertthat bit64 digest dplyr httpuv httr mime rio stringr]; }; bpa = derive2 { name="bpa"; version="0.1.1"; sha256="0np7q1nasrq4j7ssaipvbjgrsi9n612p9lp96frq1dgix95mcgf0"; depends=[magrittr plyr]; }; @@ -4569,15 +4665,15 @@ in with self; { bpkde = derive2 { name="bpkde"; version="1.0-7"; sha256="1ls6rwmbgb2vzsjn34r87ab8rnz3ls61g6f4x3jpglbk0j91f0h8"; depends=[]; }; bpp = derive2 { name="bpp"; version="1.0.0"; sha256="11fgn92vvl7kklv0xdisf8gnf2rbhq11qyckqsxvc5wa821lmnkm"; depends=[mvtnorm]; }; bqtl = derive2 { name="bqtl"; version="1.0-32"; sha256="0jjqgsm9fmvz5nkgz608xfljjpmaf4rs4f7kxvpqn4b1l9s5lhci"; depends=[]; }; - braQCA = derive2 { name="braQCA"; version="0.9.9.6"; sha256="1xqy0vykxdp0kr87w1sq8yjqrj0y8xh64fr2y8l79763xkyxpn0y"; depends=[bootstrap dplyr QCA QCAGUI]; }; braidReports = derive2 { name="braidReports"; version="0.5.3"; sha256="107c9lrzb55dw5pal8qqpn8is3nrh19vfngx3zcfpmc49f06kskq"; depends=[braidrm ggplot2]; }; braidrm = derive2 { name="braidrm"; version="0.71"; sha256="1cn0rdlw775pmzbjmhny7gkm901a3qgz7infqb5s9az606xg54d3"; depends=[]; }; - brainGraph = derive2 { name="brainGraph"; version="1.0.0"; sha256="0vphir0jyf21yyrsbfdjciyi9nb1ijkrkzdgqfnv1jxpvzk4g5zn"; depends=[abind ade4 boot cairoDevice data_table foreach ggplot2 Hmisc igraph oro_nifti permute plyr RcppEigen RGtk2 scales]; }; + brainGraph = derive2 { name="brainGraph"; version="2.0.0"; sha256="016ck3fqwfzj6jhxkqqlsj5mv16fy8k72ykwvm2biy5pwgbapwsa"; depends=[abind ade4 boot cairoDevice data_table expm foreach ggplot2 ggrepel gridExtra Hmisc igraph MASS Matrix mediation oro_nifti permute RcppEigen RGtk2 scales]; }; brainR = derive2 { name="brainR"; version="1.5.1"; sha256="0ih4vwy445ciyyvf8snm42vg7rzzf6vn9qkbhj0yyd8sy88mgyss"; depends=[misc3d oro_nifti rgl]; }; brainwaver = derive2 { name="brainwaver"; version="1.6"; sha256="0r79dpd9bbbn34rm29512srzj3m29qgvbryvrp1mwv8mmcsh6ij6"; depends=[waveslim]; }; - brant = derive2 { name="brant"; version="0.1-3"; sha256="1h6aygqcdn2wmxl8mgpq6w2rpr0asqw521i0bkgl37cwzc8sk3c0"; depends=[MASS]; }; + brant = derive2 { name="brant"; version="0.2-0"; sha256="1hdwdrdl6ad112zd7q248am3qk19alnj647nrk9xxxgd7s6a9pnb"; depends=[MASS Matrix]; }; brazilmaps = derive2 { name="brazilmaps"; version="0.1.0"; sha256="1nvd8x4m4m3966qph6390kqwpsrv7vy4yf6pam98xxkjbl9a41nf"; depends=[dplyr ggplot2 magrittr sf sp]; }; brea = derive2 { name="brea"; version="0.2.0"; sha256="0mb043fdhxrg9gyf4g55ydjx37j20394nvd4d0fmiym98lccyi04"; depends=[]; }; + breakDown = derive2 { name="breakDown"; version="0.1.3"; sha256="19vfwacbq7hvbsc42679pmd1d0n2d0m62k87qm157xmlbag6anv9"; depends=[ggplot2 ranger]; }; breakage = derive2 { name="breakage"; version="1.1-1"; sha256="0zjazyz92criiimpz4wyd4hd8ccspvh3hhqpd4qkfdzdf9wp3kns"; depends=[Imap]; }; breakaway = derive2 { name="breakaway"; version="3.0"; sha256="0y3h7gifv279z3x77jmr97c0i3vy58m5wsr8pa2vyn26m02rbkpc"; depends=[]; }; breakfast = derive2 { name="breakfast"; version="1.0.0"; sha256="0p0svsqphd5w99pf5c5jmak1xxl8md881lapa8aps9xr73m4x6lf"; depends=[plyr]; }; @@ -4585,46 +4681,46 @@ in with self; { breathtestcore = derive2 { name="breathtestcore"; version="0.4.0"; sha256="04vi9rlb5lkml91jv55v3dyyqcjp9ly760sshpsv9lpbwq47ch7c"; depends=[assertthat broom dplyr ggfittext ggplot2 MASS multcomp nlme purrr readr readxl signal stringr tibble tidyr xml2]; }; breathteststan = derive2 { name="breathteststan"; version="0.4.0"; sha256="13wqb33gvzmjpgzqyyadydz5hnqcran80azaxbixj7wga0c35pqq"; depends=[BH breathtestcore dplyr purrr Rcpp RcppEigen rstan StanHeaders stringr tibble tidyr]; }; brew = derive2 { name="brew"; version="1.0-6"; sha256="1vghazbcha8gvkwwcdagjvzx6yl8zm7kgr0i9wxr4jng06d1l3fp"; depends=[]; }; - brewdata = derive2 { name="brewdata"; version="0.4"; sha256="1i8i3yhyph212m6jjsij61hz65a5rplxw8y2xqf6daqiisam5q6i"; depends=[RCurl stringdist XML]; }; brglm = derive2 { name="brglm"; version="0.6.1"; sha256="17r3az6za98v2r06aak77kypdaqssc9wxcc6m6vb20y7xm8dp1mp"; depends=[profileModel]; }; - brglm2 = derive2 { name="brglm2"; version="0.1.5"; sha256="15y4gqw036jz3fylc8mcsc36s221mqpda6hrjwlsxilp6wahp9vj"; depends=[enrichwith lpSolveAPI MASS Matrix nnet]; }; + brglm2 = derive2 { name="brglm2"; version="0.1.6"; sha256="02zahv1kssxwz9xhb1dpc1558rmgmbpgn62xic3yvn05sixn6y6j"; depends=[enrichwith lpSolveAPI MASS Matrix nnet]; }; bride = derive2 { name="bride"; version="1.3"; sha256="03k9jwklg1l8sqyjfh914570880ii0qb5dd9l0bg0d0qrghbj0rk"; depends=[]; }; bridgedist = derive2 { name="bridgedist"; version="0.1.0"; sha256="0hqkpwpi3nv6mfhljl65zcflf4wy72ag36hdam6s7kynfj41qz6w"; depends=[]; }; bridger2 = derive2 { name="bridger2"; version="0.1.0"; sha256="0clp42nnbvd01n65azdi2ghp0mfqwsipzdl2d30q04lcvfkdpxrf"; depends=[BSDA data_table ggplot2 outliers plotly shiny shinydashboard]; }; - bridgesampling = derive2 { name="bridgesampling"; version="0.3-0"; sha256="17ncqfx2k5f2l63ha9c0n77nqdciykl58wjapciqqqz8l76nnka7"; depends=[Brobdingnag coda Matrix mvtnorm scales stringr]; }; + bridgesampling = derive2 { name="bridgesampling"; version="0.4-0"; sha256="1gv2h2wgj1ym7qpmxmj5s3q2xsz217ijwdx70qnh4ijvacsvaxwm"; depends=[Brobdingnag coda Matrix mvtnorm scales stringr]; }; briskaR = derive2 { name="briskaR"; version="0.1.1"; sha256="0w614lb94vim6wlzj13gnfgkq0vg9fjlvwvvs11pnqq501qn2hzl"; depends=[deldir fftwtools fields MASS mvtnorm pracma raster rgdal rgeos sp]; }; brlrmr = derive2 { name="brlrmr"; version="0.1.5"; sha256="14dnmh062fw11bm236ilaqs6ss4ywajvsk3sxj0zwqk2bjf7y7vh"; depends=[boot brglm MASS profileModel Rcpp]; }; brm = derive2 { name="brm"; version="1.0"; sha256="0h4kgig28hkqv1amadznc0n9256dx613rxbn8s8si11ygx79x2dd"; depends=[]; }; - brms = derive2 { name="brms"; version="1.10.2"; sha256="0v5jlrfvkgzlldgki4v2kybcr6j9nda38sg2m4cgmcqsjp120vcl"; depends=[abind bayesplot bridgesampling coda ggplot2 loo Matrix matrixStats mgcv nlme Rcpp rstan rstantools shinystan]; }; + brms = derive2 { name="brms"; version="2.1.0"; sha256="1ahm539add6g26vfj8szmpcwkhnkjcqqqq35mfryrp94yslb6a8n"; depends=[abind bayesplot bridgesampling coda ggplot2 loo Matrix matrixStats mgcv nleqslv nlme Rcpp rstan rstantools shinystan]; }; brnn = derive2 { name="brnn"; version="0.6"; sha256="0q3f3cbl89hgpav7bn54s13cysgz8fi0zm8byc9rgz0sqkjrxval"; depends=[Formula]; }; - broman = derive2 { name="broman"; version="0.65-4"; sha256="0cmcyifp49c1m3sawcs5ijjl218wk4sffvr68dfi3y9vh58f5iss"; depends=[assertthat ggplot2 jsonlite RPushbullet]; }; + broman = derive2 { name="broman"; version="0.67-4"; sha256="1jv1543zq74zjdrmhkcrjwxhn9bmsmmwadd9rjnn18svnrbnlq0g"; depends=[assertthat ggplot2 jsonlite RPushbullet]; }; broom = derive2 { name="broom"; version="0.4.3"; sha256="119pc2jnxvm13cvd77c7d14p3bn68f4jm310vj3yfck40101n9if"; depends=[dplyr nlme plyr psych reshape2 stringr tidyr]; }; - brotli = derive2 { name="brotli"; version="1.0"; sha256="0sicqwri8rxqxwhj4z8ckfls2yz09jwb9c5pjk5dhxrsyh85k80m"; depends=[]; }; + brotli = derive2 { name="brotli"; version="1.1"; sha256="1jdhc03ycafjm6zfl9m95pd3krkb94mq2lhfjchfjc876mbam8x6"; depends=[]; }; brr = derive2 { name="brr"; version="1.0.0"; sha256="050ivnqcaxiyypd1sxfpy6ianhzzmvs6c77ga40g3440cvfigkgw"; depends=[gsl hypergeo pander stringr SuppDists TeachingDemos]; }; brranching = derive2 { name="brranching"; version="0.2.0"; sha256="0y99px2m02rl60qgf6pjbjv6isp8v1w9sny6p2icgsx4bwxjxmns"; depends=[ape curl httr phytools taxize]; }; brt = derive2 { name="brt"; version="1.1.0"; sha256="11a6zpdml5vz3kcdcajw5zcck1zbp4kfdkqm3y6q7qj8ym2f12q5"; depends=[ggplot2]; }; bsam = derive2 { name="bsam"; version="1.1.2"; sha256="1m2lpqm2i4i35hzr1iylrb8skx8rsys3w542xjyqw030bs7b1rdk"; depends=[coda dplyr ggplot2 gridExtra lubridate msm mvtnorm rjags rworldxtra sp tibble]; }; - bsamGP = derive2 { name="bsamGP"; version="1.1.1"; sha256="0lk5m5c1s5zj0f8ivyj86jiyldvyhw8qq42ivl71y3qcxg6z8q1h"; depends=[ggplot2 gridExtra MASS]; }; + bsamGP = derive2 { name="bsamGP"; version="1.1.2"; sha256="037xgkmcli24jiqahxcingyx97q0jci2ahahcpn3xbzixa161rvf"; depends=[ggplot2 gridExtra MASS]; }; bsearchtools = derive2 { name="bsearchtools"; version="0.0.61"; sha256="11fqz8kdhqpc3jq34vgv3frzawgsl5y0s83rb2p54yb5yhd3p68w"; depends=[Rcpp]; }; bshazard = derive2 { name="bshazard"; version="1.0"; sha256="151c63pyapddc4z77bgkhmd7rsa1jl47x8s2n2s8yc6alwmj6dvs"; depends=[Epi survival]; }; bspec = derive2 { name="bspec"; version="1.5"; sha256="0jynvir7z4q1vrvhdn6wijdrjfrkk4544nlawabw2fnfxss91a91"; depends=[]; }; bsplinePsd = derive2 { name="bsplinePsd"; version="0.1.0"; sha256="1sicbrammayy56fa72jjygxiqxri93kglpyalhm30llsdm4jic33"; depends=[Rcpp]; }; bsplus = derive2 { name="bsplus"; version="0.1.0"; sha256="1hpjrmsn66brf1hpwfmg55jbpwbhvkz7sbr160z1cgq3hdhqm7r8"; depends=[htmltools lubridate magrittr purrr rmarkdown stringr]; }; bspmma = derive2 { name="bspmma"; version="0.1-1"; sha256="0bd6221rrbxjvabf1lqr9nl9s0qwav47gc56sxdw32pd99j9x5a9"; depends=[]; }; - bssm = derive2 { name="bssm"; version="0.1.2"; sha256="03jkwwl5impwdanilfrciypbqj57maalivdf37nssjlzcqdj2ywj"; depends=[BH coda diagis ggplot2 ramcmc Rcpp RcppArmadillo sitmo]; }; + bssm = derive2 { name="bssm"; version="0.1.4"; sha256="0wrai7s5sdjykiz8c5qrlcscm1awfz9cjaggarrs83h9fcs3n38x"; depends=[BH coda diagis ggplot2 ramcmc Rcpp RcppArmadillo sitmo]; }; bssn = derive2 { name="bssn"; version="0.7"; sha256="1g2xhb7bqapwd5zbc4bl4h1fskd7k6gd0rz74hnydiiwxrwiihf6"; depends=[sn]; }; bst = derive2 { name="bst"; version="0.3-14"; sha256="02rnnv3f89329kw81a1v88wjzrfjshqjijw5hp3zyydcsfa3j088"; depends=[doParallel foreach gbm rpart]; }; bsts = derive2 { name="bsts"; version="0.7.1"; sha256="07bnhh82abagphfp6y40wchmgb10h2l5lnqc7am50arfa324blrh"; depends=[BH Boom BoomSpikeSlab xts zoo]; }; btb = derive2 { name="btb"; version="0.1.14"; sha256="0nk76ddsg8pjd35y2yqw27iammk948i29xmr0ha9l8b867693m44"; depends=[Rcpp sp]; }; - btergm = derive2 { name="btergm"; version="1.9.0"; sha256="03xqzavq3n1zcsfagkprn30i4k11cv1145ni0i8x0jij5dwn7av9"; depends=[boot coda ergm ggplot2 igraph Matrix network ROCR RSiena sna speedglm statnet statnet_common texreg xergm_common]; }; + btergm = derive2 { name="btergm"; version="1.9.1"; sha256="1bvq6v35fpfd4vhbq1c5jb4gg3iyfflbv0n89gv4hzm80xx50rs9"; depends=[boot coda ergm ggplot2 igraph Matrix network ROCR RSiena sna speedglm statnet statnet_common texreg xergm_common]; }; btf = derive2 { name="btf"; version="1.2"; sha256="110p7rk43g48yrnr6c9xkyzsh3kqdywsvi23dav89hl7sxahrf75"; depends=[coda Matrix Rcpp RcppEigen]; }; - bucky = derive2 { name="bucky"; version="1.0.3"; sha256="07zw73pq3si97nsvjdd8jvh7k92vkzzkcb9aallgcqbamfy0sd1q"; depends=[lmtest sandwich]; }; + bucky = derive2 { name="bucky"; version="1.0.4"; sha256="1irzv1ib40h0ijlpawp0lac572nik3x77xcdi1vyncvinc9pcmr8"; depends=[lmtest sandwich]; }; bujar = derive2 { name="bujar"; version="0.2-3"; sha256="0gc5wrnhark1gawl4qqjh179xaxjal5r7qq4ilx30yn3qhzrqdaz"; depends=[bst earth elasticnet gbm mboost mda modeltools mpath rms]; }; bulletr = derive2 { name="bulletr"; version="0.1"; sha256="181rnrp62almf08gr41qnrnq8qnbqraqdvj4zixdh8fachsq2imp"; depends=[dplyr ggplot2 plotly plyr reshape2 robustbase smoother xml2 zoo]; }; + bullwhipgame = derive2 { name="bullwhipgame"; version="0.1.0"; sha256="03nwf2v4zhgkxvkghpkbkxz0cnkqcwwl51ykrk25qciakfqkgfws"; depends=[shiny]; }; bunchr = derive2 { name="bunchr"; version="1.2.0"; sha256="1b8hdg2x26k0ahx4gxdpzr36hy056939r4496q3vbgyd4bbk2fbd"; depends=[shiny]; }; bundesligR = derive2 { name="bundesligR"; version="0.1.0"; sha256="0dnhbh9jh7dfbk7mfh8msq4ys5kakalr0kwkycycrb2q8rd049vp"; depends=[]; }; - bupaR = derive2 { name="bupaR"; version="0.3.0"; sha256="0732h95pv8a235qvaydfaziwbq0q2gxmn4ffh7n1ar4azkgc94l3"; depends=[data_table dplyr magrittr miniUI purrr shiny]; }; - burnr = derive2 { name="burnr"; version="0.2.1"; sha256="138n52rwlkkxpbrz65cfcv9rp4vp4c17w9ydpqfk9fa8b3sqhhsn"; depends=[ggplot2 MASS plyr reshape2]; }; + bupaR = derive2 { name="bupaR"; version="0.3.2"; sha256="08xkf88fx8wn22vzn2ghm1jagh09pafqgmx41k99vrqkl3nrfm58"; depends=[data_table dplyr forcats glue magrittr miniUI purrr rlang shiny tidyr]; }; + burnr = derive2 { name="burnr"; version="0.2.2"; sha256="1b5ys0jm2dmiz1jd5f3907dhv44wh60kmfdfhj3fzx8rk7zllm06"; depends=[ggplot2 MASS plyr reshape2]; }; bursts = derive2 { name="bursts"; version="1.0-1"; sha256="172g09d1vmwl83xs6gr4gfblqmx3apvblpzdr5d7fcw1ybsx0kj6"; depends=[]; }; bvarsv = derive2 { name="bvarsv"; version="1.1"; sha256="1bv4fbbi8bn7sqqpjlf8w5jpgydjr15wv5v9940wc42yk792yjrx"; depends=[Rcpp RcppArmadillo]; }; bvenn = derive2 { name="bvenn"; version="0.1"; sha256="1xrya49w5bd2b7plfxpqla60b2828rkm0rjmc4qnqzvrahsbal0y"; depends=[]; }; @@ -4638,6 +4734,7 @@ in with self; { cAIC4 = derive2 { name="cAIC4"; version="0.2"; sha256="13sp3wywv82wgi1vsbxwn68v9xigy0fi3mcwyxjmmgmnsxns2fza"; depends=[lme4 Matrix]; }; cIRT = derive2 { name="cIRT"; version="1.2.1"; sha256="1i43pqlyzykyd1a6abg1yi7ai9ay7d2jkvnw1sa4c6q07jk56d89"; depends=[Rcpp RcppArmadillo]; }; cOde = derive2 { name="cOde"; version="0.3"; sha256="1r49q7qansn86wrxbhxqnn1dccd9av4lh4h5pn9kk42pls9q60nf"; depends=[Rcpp RcppArmadillo]; }; + cRegulome = derive2 { name="cRegulome"; version="0.1.0"; sha256="0yf5kx583k483rs3vw614qfv92k3c8gld8vsw16j1vlsbrasbiah"; depends=[DBI dplyr ggplot2 ggridges httr magrittr purrr R_utils reshape2 RSQLite tidyr UpSetR VennDiagram]; }; cSFM = derive2 { name="cSFM"; version="1.1"; sha256="1znxsqa8xdifmryg7jiqbpzm837n4n862kg5x1aki52crc4zyk3k"; depends=[MASS mgcv mnormt moments sn]; }; ca = derive2 { name="ca"; version="0.70"; sha256="0730c7nk49hz0k1i5nnhq2j3wbhrlhr1qvb50mk8vmqkbhb1pz1l"; depends=[]; }; caRpools = derive2 { name="caRpools"; version="0.83"; sha256="10m7fw1zfr9i6v2qg235diwf3fmfr88incxnqpvnhmqcn082mxrp"; depends=[biomaRt DESeq2 rmarkdown scatterplot3d seqinr sm VennDiagram xlsx]; }; @@ -4652,16 +4749,17 @@ in with self; { calibrar = derive2 { name="calibrar"; version="0.2.0"; sha256="1544bc5rhhc6d1mky7ngza00wwh63q07dkbzlwfgyavly8m9cplb"; depends=[cmaes foreach optimx]; }; calibrate = derive2 { name="calibrate"; version="1.7.2"; sha256="010nb1nb9y7zhw2k6d2i2drwy5brp7b83mjj2w7i3wjp9xb6l1kq"; depends=[MASS]; }; calibrator = derive2 { name="calibrator"; version="1.2-6"; sha256="1arprrqmczbhc1gl85fh37cwpcky8vvqdh6zfza3hy21pn21i4kh"; depends=[cubature emulator]; }; - callr = derive2 { name="callr"; version="1.0.0"; sha256="05gp4y69ixajvmhrh1qrn5cnzj9jhfdxrfxnm2l2xfisfa680mic"; depends=[]; }; + callr = derive2 { name="callr"; version="2.0.2"; sha256="0m51p39vfwldxv6h8x4y9w3laf8q9bldhfqhlcrlx3xhy3irb1bp"; depends=[assertthat crayon debugme R6 testthat]; }; calmate = derive2 { name="calmate"; version="0.12.1"; sha256="07sjbq7bcrhal52pdzsb5pfmk6a8a44wg8xn79sv4y5v74c5xaqz"; depends=[aroma_core MASS matrixStats R_filesets R_methodsS3 R_oo R_utils]; }; camel = derive2 { name="camel"; version="0.2.0"; sha256="0krilird8j69zbll96k46pcys4gfkcnkisww138wslwbicl52334"; depends=[igraph lattice MASS Matrix]; }; camsRad = derive2 { name="camsRad"; version="0.3.0"; sha256="06gar6qan1ka01ngjvbpcv649yvfga697mplwn1x6qnfr4ngb7cs"; depends=[httr xml2]; }; camtrapR = derive2 { name="camtrapR"; version="0.99.9"; sha256="1kzy90mwmpn2yb47xp5b8s3lj8lbkg8hfw44pwfb54gqf7wi2lkm"; depends=[overlap rgdal ritis secr sp taxize]; }; + cancensus = derive2 { name="cancensus"; version="0.1.7"; sha256="0v3wbmdqg36zn30kgj5xbndz69x3vvr0i6ag57gz8sbbgc4nyqbr"; depends=[digest dplyr httr jsonlite rlang]; }; cancerGI = derive2 { name="cancerGI"; version="1.0.0"; sha256="1chkcyf9m98gbn6b3vmb1baw7kii4g5vxvg2xfi7i6wwdn8sqr65"; depends=[igraph qvalue reshape2 survival systemfit]; }; cancerTiming = derive2 { name="cancerTiming"; version="3.1.8"; sha256="1sfi8q2f5ag7iak0sf9pmqncb89w3gnxdiwjwpivkwhr28ais4mq"; depends=[gplots LearnBayes]; }; candisc = derive2 { name="candisc"; version="0.8-0"; sha256="0hq5bwvq791rhff2c29xdjbbkcyydii1lbsy05c1fapyn88ir0mi"; depends=[car heplots]; }; - canprot = derive2 { name="canprot"; version="0.1.0"; sha256="0g3sqc81qw8jx6v2p6makclccnvhshimwlhk2cabq20rfs8npgbm"; depends=[CHNOSZ colorspace xtable]; }; - canvasXpress = derive2 { name="canvasXpress"; version="1.17.4"; sha256="1n7ar61fzadjsq13jxf3157w7qnk4dhg7vdc3kwaasaygam6i5xc"; depends=[htmlwidgets magrittr]; }; + canprot = derive2 { name="canprot"; version="0.1.1"; sha256="14g7wl4p9bgwf5jm48mp676z0pwlsd2xgxjwzixri7mxxh0ivfh1"; depends=[CHNOSZ xtable]; }; + canvasXpress = derive2 { name="canvasXpress"; version="1.18.5"; sha256="052qwymd28pi4c5pkdrwb85r1f1342y46fpirz2mrspx9r877d7h"; depends=[htmlwidgets]; }; cape = derive2 { name="cape"; version="2.0.2"; sha256="0ngm9scd3f2zcy7gy0lqk05cgbfrhhcss3mj5g6bj0byhgwd7msn"; depends=[corpcor doParallel evd fdrtool foreach HardyWeinberg igraph Matrix qpcR RColorBrewer regress shape]; }; caper = derive2 { name="caper"; version="0.5.2"; sha256="1l773sxmh1nyxlrjz8brnwhwraff826scwixrqmgdciqk7046d35"; depends=[ape MASS mvtnorm]; }; capm = derive2 { name="capm"; version="0.11.0"; sha256="1yw7h1r5m4md8yv0fn1j4wxvhwybifqyvrn8ip3fl32kxbwsmnvz"; depends=[deSolve FME ggplot2 maptools reshape2 rgdal shiny sp survey]; }; @@ -4676,7 +4774,7 @@ in with self; { cardidates = derive2 { name="cardidates"; version="0.4.7"; sha256="0dxb2941w56s479laf315hqh9iv3k2l1ds7k8hdl9akcacagjgs2"; depends=[boot lattice pastecs]; }; cardioModel = derive2 { name="cardioModel"; version="1.4"; sha256="1a2nvn4a4zc89pb01m20pxqgbj0ypzzvx9w2vfzwly1kzkhvc9hr"; depends=[lubridate nlme]; }; care = derive2 { name="care"; version="1.1.10"; sha256="00h36by40v60mqzbf615a99sdfz0i42i57wybxrcm7y1y2la0da8"; depends=[corpcor]; }; - caret = derive2 { name="caret"; version="6.0-77"; sha256="05c504567s2nppzfgi36mhszbym2pr80nf50dgxcxfx030721v5y"; depends=[foreach ggplot2 lattice ModelMetrics nlme plyr recipes reshape2 withr]; }; + caret = derive2 { name="caret"; version="6.0-78"; sha256="0h1nxzii2h80aslp1zsjczrlfmaks44sskabk4yq9c5rafc7ka6y"; depends=[foreach ggplot2 lattice ModelMetrics nlme plyr recipes reshape2 withr]; }; caretEnsemble = derive2 { name="caretEnsemble"; version="2.0.0"; sha256="0v9gyp81abrbm8b79ch927iqh0v84q5222bvg1wx8n65vx59sx42"; depends=[caret data_table digest ggplot2 gridExtra lattice pbapply plyr]; }; carfima = derive2 { name="carfima"; version="1.0.0"; sha256="0bxk254q916w5h5zyyp2bs6nvbmbzqfx3jr4a80fkgbmr49chzzp"; depends=[DEoptim invgamma MASS numDeriv truncnorm]; }; caribou = derive2 { name="caribou"; version="1.1"; sha256="0ibl3jhvsgjfcva0113z0di9n5n30bs90yz0scckfv1c0pjhn4xd"; depends=[]; }; @@ -4688,7 +4786,7 @@ in with self; { caschrono = derive2 { name="caschrono"; version="2.0"; sha256="091zqin2cr9p50zmifrb52dxy10zflm7f0lr9nissy589qjdd0gk"; depends=[Hmisc zoo]; }; caseMatch = derive2 { name="caseMatch"; version="1.0.7"; sha256="1xd7mlnknjrilxcp0w0b36aaiql6jdqgyin1823r2x8vl9r4aqns"; depends=[]; }; casebase = derive2 { name="casebase"; version="0.1.0"; sha256="0216qzyxv44cl9f806lal9lx4n0zzr9csx8ggyjva04h5iiqrq6w"; depends=[data_table ggplot2 survival VGAM]; }; - castor = derive2 { name="castor"; version="1.2.2"; sha256="0kcl8967flj4bqrj9wb75mipq3z037hw3z02yj1bi39gzzj6ymg7"; depends=[naturalsort Rcpp]; }; + castor = derive2 { name="castor"; version="1.3.2"; sha256="0pz02wbm9w3mkp2gmnl92zgv1b63dvcp6j374hqjgxxpc79aw30m"; depends=[naturalsort Rcpp]; }; cat = derive2 { name="cat"; version="0.0-6.5"; sha256="1gv7chqp6kccipkrxjwhsa7yizizsmk4pj8672rgjmpfcc64pqfm"; depends=[]; }; catIrt = derive2 { name="catIrt"; version="0.5-0"; sha256="09010z1q96nbnpys6mybspaqy57lvgd2cvwgnfijzgx3kl87pwnl"; depends=[numDeriv]; }; catR = derive2 { name="catR"; version="3.13"; sha256="1xzxgf9d33h46qxz6a8d71mi673yzdnvxcxj073z7y19hjss3pkw"; depends=[]; }; @@ -4699,19 +4797,20 @@ in with self; { cate = derive2 { name="cate"; version="1.0.4"; sha256="0qck6675xm5xbw440m1b6n38wjwk7izx3s0zpxbmhc9wh12c5prk"; depends=[corpcor esaBcv leapp MASS ruv sva]; }; catenary = derive2 { name="catenary"; version="1.1.1"; sha256="0gd46zvd51xvra0d7k7qdcmfl71vcfk750lcafkhmr4cg0vkqcz7"; depends=[boot ggplot2]; }; cati = derive2 { name="cati"; version="0.99.1"; sha256="0sg6qagv1wiygylgygjfn7v4n99ifaaa34qvaspmm9b4fyfcxqa5"; depends=[ade4 ape e1071 FD geometry hypervolume mice nlme rasterVis vegan]; }; - catlearn = derive2 { name="catlearn"; version="0.4"; sha256="1bpmvbpa6qab40ajmy64hg6f3zh3yifqj0rfqyk0b9f9jpdqxz9h"; depends=[Rcpp]; }; + catlearn = derive2 { name="catlearn"; version="0.5"; sha256="12sl1jlnn8669via3fbslbqs3f34andwsizkllpiw0b6k9z2yid6"; depends=[doParallel foreach Rcpp]; }; catmap = derive2 { name="catmap"; version="1.6.4"; sha256="18449qh10jxfi8p49gmbnib5y013nfdgdblbs4n0mfs0nnzb10sx"; depends=[forestplot metafor]; }; catnet = derive2 { name="catnet"; version="1.15.3"; sha256="1dgqrn1lz57pwb5pca0mlvcmw9piy9xgf6fs0y2lsy4qxa9k0plk"; depends=[]; }; catspec = derive2 { name="catspec"; version="0.97"; sha256="1crry0vg2ijahkq9msbkqknljx6vnx2m88bmy34p9vb170g9dbs1"; depends=[]; }; + cattonum = derive2 { name="cattonum"; version="0.0.1"; sha256="04vayxycv9w5ssw69gifb1y15jkz294wia5s386wyz3bz0sf3fn6"; depends=[rlang tidyselect]; }; causalMGM = derive2 { name="causalMGM"; version="0.1.1"; sha256="13qx71rfc6m7mvlpwma7ks09f3mlxknxw3jlv3b4iq5pjs8f1v5r"; depends=[rJava]; }; causaldrf = derive2 { name="causaldrf"; version="0.3"; sha256="16gqx8b8alwm8a4lm69qamnqr3bg2qbz0d6q4lyqyrwsk12grid6"; depends=[mgcv survey]; }; - causaleffect = derive2 { name="causaleffect"; version="1.3.5"; sha256="12acm5k1nx6axhxfsiqwyaplfl5z8zzjr3kwk1hdzdrmxni6vhxs"; depends=[ggm igraph XML]; }; + causaleffect = derive2 { name="causaleffect"; version="1.3.6"; sha256="1kk68qlps0r40f3v4lb7njzg81igjp10jfinncxnn7gwyx58px83"; depends=[ggm igraph XML]; }; causalsens = derive2 { name="causalsens"; version="0.1.1"; sha256="1z92ckqa07ajm451wrldxx9y43nawlvj2bsz0afxc9mrhjwjg5dh"; depends=[]; }; cba = derive2 { name="cba"; version="0.2-19"; sha256="0nyssc7j5rkv1gcgx4cg31hwc37wd5k3yn9s2k22ffxlnrknss2l"; depends=[proxy]; }; cbanalysis = derive2 { name="cbanalysis"; version="0.2.0"; sha256="0h0h8krlb6rckjpcw0jbbr8pcy3jm0cszimbm56l0ca668kiix06"; depends=[]; }; cbar = derive2 { name="cbar"; version="0.1.3"; sha256="1jy52qnpjvszdd8xviv3vr00ds6bah73q0mhd4kixf68jafnxd35"; depends=[Boom bsts dplyr ggplot2 magrittr]; }; cbird = derive2 { name="cbird"; version="1.0"; sha256="0kzylylk46swd7f0j6kjyrcs3plbx9799q9kb8hjxmgh0qcjk2p6"; depends=[]; }; - cbsodataR = derive2 { name="cbsodataR"; version="0.2.1"; sha256="0nsg0fzaqhzv8r2lwz5xlybwgv25c0a2hid91ky95yaqvnjrp6mq"; depends=[jsonlite whisker yaml]; }; + cbsodataR = derive2 { name="cbsodataR"; version="0.2.5"; sha256="1dc4hbida1fbxin22paa31c0f4xj1pqzcc4649p7lbygqvf1fhqh"; depends=[httr jsonlite whisker yaml]; }; ccChooser = derive2 { name="ccChooser"; version="0.2.6"; sha256="1vgp4zhg46hcf9ma2cmwgnfrqkmq1arh0ahyzjpfk3817vh7disc"; depends=[cluster]; }; ccRemover = derive2 { name="ccRemover"; version="1.0.4"; sha256="1npd0vx2hyg7qbwd650987i49v5cxr6i1hlj5rw6fxc0b808s596"; depends=[]; }; ccaPP = derive2 { name="ccaPP"; version="0.3.2"; sha256="166spwqsqbp42mr1acglydlxspcpn8vhnim8r3s9m81sa9pmazpj"; depends=[pcaPP Rcpp RcppArmadillo robustbase]; }; @@ -4721,13 +4820,13 @@ in with self; { cccrm = derive2 { name="cccrm"; version="1.2.1"; sha256="180hzxm4z91hh008lysq1f0zky7qngg5z1laa1c119g4rqqcdskl"; depends=[gdata nlme]; }; ccda = derive2 { name="ccda"; version="1.1"; sha256="0ya9x1b41l0pjyyfdswjyip0c2v8z7gncbj7cdz0486ad75229x7"; depends=[MASS]; }; ccdrAlgorithm = derive2 { name="ccdrAlgorithm"; version="0.0.4"; sha256="192pfsk6yw26b6f23qgkxslsfwpav8zv6js46i61vj2wa10f4mf2"; depends=[Rcpp sparsebnUtils]; }; + ccfa = derive2 { name="ccfa"; version="1.0.0"; sha256="0hhrcckiig1qfj7qb04jdmm7bwk9a17y6fn7ldxbmmw8546ad7md"; depends=[BMisc formula_tools ggplot2 pbapply quantreg TempleMetrics tidyr]; }; ccgarch = derive2 { name="ccgarch"; version="0.2.3"; sha256="0angffla3sk9i86v6bbsav95fp3mz5yvq7qfv0fx2v0nd2cx116w"; depends=[]; }; cchs = derive2 { name="cchs"; version="0.4.0"; sha256="1dahiyn3rj65w56hmhqdxvxh7vkjy5rxlkp1l59aq5iba21ldsyj"; depends=[survival]; }; cclust = derive2 { name="cclust"; version="0.6-21"; sha256="1n5hh0017bcq8ck52qq89jm9zgdfpmiksrypsnv2vvhk3nr0s91c"; depends=[]; }; ccmm = derive2 { name="ccmm"; version="1.0"; sha256="0855nr74xxpy7in2vrw15g8pv7nm1374irc1c5hikr5hadk5pf8v"; depends=[MASS]; }; cctools = derive2 { name="cctools"; version="0.1.1"; sha256="1baqijxg75wr90y38d5g1gg8jmpz8ji7zv51wp9n1knif27rg348"; depends=[qrng Rcpp RcppArmadillo]; }; - cda = derive2 { name="cda"; version="2.0.0"; sha256="1vq90z6kafiz5b884hxsz3lg8a0zis1n475lmvwlymcam5rpgjrc"; depends=[randtoolbox Rcpp RcppArmadillo reshape2 statmod]; }; - cdata = derive2 { name="cdata"; version="0.5.0"; sha256="0jliwy73wag6jiahdx0kkpxbkjmjl6aa4wm6j8hnv8xz47m78x99"; depends=[DBI RSQLite wrapr]; }; + cdata = derive2 { name="cdata"; version="0.5.2"; sha256="0l0vqmvizvb7h31796yjbyd0wspxvl3zx64xarkqpq8vwqwkfv51"; depends=[DBI RSQLite wrapr]; }; cdb = derive2 { name="cdb"; version="0.0.1"; sha256="1rdb4lacjcw67apdyiv7cl1xvv9d1mrzck1qk605n6794k7wf2ys"; depends=[bitops]; }; cdcfluview = derive2 { name="cdcfluview"; version="0.7.0"; sha256="00yc3q28y20l2ppqxy6h53p9fvwhvpkc8m7csmp2lizqh787i2cc"; depends=[dplyr httr jsonlite MMWRweek purrr readr sf units xml2]; }; cdcsis = derive2 { name="cdcsis"; version="1.0"; sha256="1fxdsaqpjhpffn2fxddfcrx8wxwyvfws6rxkpp57g25980xiyzkd"; depends=[ks]; }; @@ -4741,10 +4840,9 @@ in with self; { ceg = derive2 { name="ceg"; version="0.1.0"; sha256="01la7kv0a3inc9vy5x010ysicfiv404bqfgs8csvqixviap9rd74"; depends=[graph Rgraphviz]; }; celestial = derive2 { name="celestial"; version="1.4.1"; sha256="0cvfka5lj0sj9cd7xs68szhckzfm6cgxwxim1nd530s6gxh0l7kz"; depends=[NISTunits pracma RANN]; }; cellVolumeDist = derive2 { name="cellVolumeDist"; version="1.3"; sha256="00hq3nbfbnmg2lhrqd0glkh5ld50fv54ll3q6v875d1lgs44sln1"; depends=[gplots minpack_lm]; }; - cellWise = derive2 { name="cellWise"; version="1.0.0"; sha256="1cpkz256z6ngqdd1wa0ajyjcl0j1xln2f0hwsw24wfzgb8sdj6ac"; depends=[ggplot2 gridExtra matrixStats reshape2 scales]; }; + cellWise = derive2 { name="cellWise"; version="2.0.8"; sha256="1xahayqlpylysdiqggzqh7z75r3ldi79bx124ky84r1vab659lm7"; depends=[ggplot2 gridExtra matrixStats Rcpp RcppArmadillo reshape2 scales]; }; cellranger = derive2 { name="cellranger"; version="1.1.0"; sha256="16fgi3annn34c3cxi0pxf62mmmmxi21hp0zzlv7bkfsjqy4g4f2x"; depends=[rematch tibble]; }; cem = derive2 { name="cem"; version="1.1.17"; sha256="1jnhsrc1jhax3zlw9ynla7g9z5i4w01iar7f7hmv92kp1cwh8rbd"; depends=[combinat lattice MatchIt nlme randomForest]; }; - cems = derive2 { name="cems"; version="0.4"; sha256="0mk02m702xfr1gh0l3973z1hdpncgjl2vfd1k1iss5s64k56gs4q"; depends=[plotrix rgl vegan]; }; cenGAM = derive2 { name="cenGAM"; version="0.5.3"; sha256="0qic2g2bq24k9jimxdk8g7bsmi4br2r6159ipdhh5ym81ji3sf5p"; depends=[mgcv]; }; censCov = derive2 { name="censCov"; version="1.0-0"; sha256="0i9vmyi12f1m5xnrl4cxk3z9qv7ymzxsyf4gbnpg1ph63yfnhv3g"; depends=[survival]; }; censNID = derive2 { name="censNID"; version="0-0-1"; sha256="1ij5ci6nkqf0rq51vyh4jw5sr3y46yndfkjmwl78ppdj66axxir5"; depends=[]; }; @@ -4753,49 +4851,52 @@ in with self; { census = derive2 { name="census"; version="0.2.0"; sha256="02qlmifppnfxw7bzh0zngih8z8qz0sxpsi38h7bv324vxx94gvz2"; depends=[ggmap RCurl]; }; censusGeography = derive2 { name="censusGeography"; version="0.1.0"; sha256="1ncgd05ml571g3vy1g4p5xxg2bm08hbb6d5r3hpz7frn7w3l8l1d"; depends=[qdapTools]; }; censusapi = derive2 { name="censusapi"; version="0.2.1"; sha256="1ax1lwnw9978iss8j1hpmbnp8pbsz8rppz37cyfn0m7xnpg9mq8b"; depends=[httr jsonlite]; }; - censusr = derive2 { name="censusr"; version="0.0.3"; sha256="0lcji62kzdxaslvvp54bwfdmbx69lds7inmvywlj0plfqg1kvsid"; depends=[dplyr httr stringr]; }; + censusr = derive2 { name="censusr"; version="0.0.4"; sha256="1n9571fyr46wj1dcxc2xgns9865655yzlq7yfz8im014wh0ycwqc"; depends=[dplyr httr stringr]; }; censys = derive2 { name="censys"; version="0.1.0"; sha256="0r0yvaidn0qn96hx461415hywsjfgaz9wvvdssx7w97v2ndnk9sy"; depends=[httr jsonlite purrr stringi]; }; centiserve = derive2 { name="centiserve"; version="1.0.0"; sha256="1m6gqz2rk7023340laa5pc0ncbfka2qi9ajvh65fwijd7xvv3n5c"; depends=[igraph Matrix]; }; cents = derive2 { name="cents"; version="0.1-41"; sha256="03ycbd0c8b7danbblaixg6sm7msr9ixkanqswczqa8n2frhjfgj0"; depends=[]; }; cepR = derive2 { name="cepR"; version="0.1.0"; sha256="1yqny6vgsjbrfxlk965pyk38n87ylf4513kbaljmgggrlyaz0qap"; depends=[dplyr httr magrittr purrr tibble]; }; cepp = derive2 { name="cepp"; version="1.7"; sha256="01hvm6586xnb1crvk7brqh3dm2j44ia5lrl5swnf6pb682yskbq0"; depends=[randtoolbox trust]; }; + cepreader = derive2 { name="cepreader"; version="1.1-2"; sha256="0pyycacsnbqz7hyrvrwwmmphrhny0byyxv66fwrvcsk3s88a7crf"; depends=[]; }; cernn = derive2 { name="cernn"; version="0.1"; sha256="0gz2x20pgsiq85hwkkpg4s1cdlw9plygx0446djc7qsymp469p2w"; depends=[]; }; cetcolor = derive2 { name="cetcolor"; version="0.1.0"; sha256="013ghlfs27a585851cir5fxgxhi41h48irq90932y55npa8gwdak"; depends=[]; }; cfa = derive2 { name="cfa"; version="0.10-0"; sha256="12z58y4ls9m58wpj1xa4ir2p2apzxaskps05sxy2946m24i71zfk"; depends=[]; }; cffdrs = derive2 { name="cffdrs"; version="1.7.6"; sha256="00n3h2vf855anxh0xgsps7sv0kj819864wjdmkiak1lsacysav8s"; depends=[data_table doParallel foreach raster rgdal spatial_tools]; }; cg = derive2 { name="cg"; version="1.0-3"; sha256="1kbyal1sicbr10yvxpwgcij710kqpi23vmndp9kyfzn3k8zfird3"; depends=[Hmisc lattice MASS multcomp nlme rms survival VGAM]; }; cgAUC = derive2 { name="cgAUC"; version="1.2.1"; sha256="172f9rkfhv4xzwpw8izsnsdbcw9p3hvxhh0fd8hzlkil7vskr3k8"; depends=[Rcpp]; }; - cgam = derive2 { name="cgam"; version="1.8"; sha256="17pw2z5609lfsmz59mp5wwbcvb7zqrpp04iggn4nx0l0wxxbfr96"; depends=[coneproj Matrix svDialogs]; }; - cgdsr = derive2 { name="cgdsr"; version="1.2.6"; sha256="05q26g7gflq4hsd3xa5xkjc3mhvml7i6dzamfwm0i14kxigghqp8"; depends=[R_methodsS3 R_oo]; }; + cgam = derive2 { name="cgam"; version="1.9"; sha256="0hc8q6mdd8fy2229biknissmg95b88kryr4c33yv5j77z6gw3s4y"; depends=[coneproj Matrix svDialogs]; }; + cgdsr = derive2 { name="cgdsr"; version="1.2.10"; sha256="1xyhw7mhmjichr1l6f9y1qvfj9wm87kfbm87ji7lcwf36gxh5g23"; depends=[R_methodsS3 R_oo]; }; cggd = derive2 { name="cggd"; version="0.8"; sha256="06z0mrxxc02parn9vkjv89qq4yqmsccsy319fi6c5iarssyvin1r"; depends=[]; }; cgh = derive2 { name="cgh"; version="1.0-7.1"; sha256="1fgjz43bgnswlyvrm669x697lybq3jyzz4l8ppgxqwxp4p4d2yqn"; depends=[]; }; cghFLasso = derive2 { name="cghFLasso"; version="0.2-1"; sha256="0b1hnjf9g0v47hbz0dy9m6jhcl1ky20yyhhmm8myng2sndcpjsbf"; depends=[]; }; cghRA = derive2 { name="cghRA"; version="1.6.0"; sha256="16dlw27s8wckc75xcwc2g74pw6bar0y0ii3h53w1hql05d4f7sb8"; depends=[DNAcopy Rgb]; }; - cghseg = derive2 { name="cghseg"; version="1.0.2-1"; sha256="0q9ks19r21b6p0gfd7mnsgp7pbihz3yzmbzijlrx178f1z9yjx5q"; depends=[]; }; - cgwtools = derive2 { name="cgwtools"; version="3.0"; sha256="01888n056x4c8g0676jnbh6d89hamzxrh33aw6r28mzlnmfy5lmw"; depends=[]; }; + cgmanalysis = derive2 { name="cgmanalysis"; version="1.3"; sha256="0fb93czybl9rpndvz3lykfiwksa154vdrmils8c8l688c62gyq55"; depends=[gdata pracma zoo]; }; changepoint = derive2 { name="changepoint"; version="2.2.2"; sha256="1jbki95pck10phpxna0b4i79hhl912zqi5ii9mjqb673y64dszkj"; depends=[zoo]; }; changepoint_np = derive2 { name="changepoint.np"; version="0.0.2"; sha256="03i4l59h8cr6bizbqn288x9r85kvaz1dyhkv5fsj1189qpdi9m88"; depends=[changepoint zoo]; }; changepointsHD = derive2 { name="changepointsHD"; version="0.3.0"; sha256="05zmypz2jz55m9avzg63dmp7fpcgi7jpc9vf2fv0kywcvf2wz5ym"; depends=[Rcpp RcppArmadillo]; }; + changepointsVar = derive2 { name="changepointsVar"; version="0.1.0"; sha256="0kj9m9jik1dm5fx4c4hb559f5irpl1mvxk4wwajd5577a2fdqxb5"; depends=[lars MASS]; }; charlatan = derive2 { name="charlatan"; version="0.1.0"; sha256="1q5ybipi6b0lzpis53rxsfa0mlkp3c9zmcw5fwq5h93vlrdf6986"; depends=[R6 tibble whisker]; }; cheb = derive2 { name="cheb"; version="0.3"; sha256="0vqkdx7i40w493vr7xywjypr398rjzdk5g410m1yi95cy1nk4mc7"; depends=[]; }; chebpol = derive2 { name="chebpol"; version="1.3-1789"; sha256="1505zdzvc9drw7n8qw5jmqligjgp5gwwki4wlk8dsm0p3p06dvd2"; depends=[]; }; checkarg = derive2 { name="checkarg"; version="0.1.0"; sha256="0rkdjs2c4yx9laqgayxz57bwxhwgdh6ndrr4i3b1kh31lcmk1xc6"; depends=[]; }; checkmate = derive2 { name="checkmate"; version="1.8.5"; sha256="1q6igk50lq4fp5d3imgcn1j063h3gsp214ra4nlf534hf4wjlkg9"; depends=[backports]; }; - checkpoint = derive2 { name="checkpoint"; version="0.4.2"; sha256="1j7rsg14n3n27l4rmbpd5x0v3ak04sk1z65r6zxq1if173izmjrk"; depends=[]; }; + checkpoint = derive2 { name="checkpoint"; version="0.4.3"; sha256="0r7v7ijyq92yd95ssxxbdlp5dv1sd09yvxr8c0yihf48kzw65s63"; depends=[]; }; + checkr = derive2 { name="checkr"; version="0.0.2"; sha256="04gj2smibvkanglxv8vby4gwj9wfq44a8zclqvimp5hfb0ay12ny"; depends=[]; }; cheddar = derive2 { name="cheddar"; version="0.1-631"; sha256="0s6v3xcpv8ppgx6q6h2hgrjcf3f3i87kmylnr9q9zhry7729aiyn"; depends=[]; }; chemCal = derive2 { name="chemCal"; version="0.1-37"; sha256="1sbmr8arczc65nzbgr5rfk2mbbnk6h60ni9cd9jngbhgdf0g1scw"; depends=[]; }; chemmodlab = derive2 { name="chemmodlab"; version="1.0.0"; sha256="0lzibshhfz52m61xldf0xq4cc1xx64fjlw18hlkiv65dj3gcj2mh"; depends=[caret class e1071 elasticnet foreach lars MASS nnet pls pROC randomForest rpart tree]; }; chemometrics = derive2 { name="chemometrics"; version="1.4.2"; sha256="0shqns0n964pfwnd0q5sadglrlpgs4g5fbv45fsj9p37l4pq61dp"; depends=[class e1071 lars MASS mclust nnet pcaPP pls robustbase rpart som]; }; - cherry = derive2 { name="cherry"; version="0.6-11"; sha256="0ixrzbzg559h0qb33b9158rk6w6as2b34b7iq5vzm429cpyzl7l8"; depends=[bitops lpSolve Matrix slam]; }; + cherry = derive2 { name="cherry"; version="0.6-12"; sha256="1b74wlvjqxa532gxs400m1k4qs7xwpdap9ms60nlcwr7x1857mk6"; depends=[bitops lpSolve Matrix]; }; chi = derive2 { name="chi"; version="0.1"; sha256="1y91mwahj4j2wz0y5k5vdpq7ygq834h8jkn37n74lqnwvv1968rr"; depends=[]; }; chi2x3way = derive2 { name="chi2x3way"; version="1.1"; sha256="13qc8sigiw4gcxk8y50q7yfgzbssjyl41fizzjqzcp3p14kpsmzw"; depends=[]; }; + childhoodmortality = derive2 { name="childhoodmortality"; version="0.2.0"; sha256="1kdxb02xryc46p7q39gpvn1gwkkrr0rr398i9zxizpxaxvn0r6ql"; depends=[matrixStats plyr]; }; childsds = derive2 { name="childsds"; version="0.6.7"; sha256="1m5w0wbdk032b6d6h1704wji84yckyl427bja0mb4vqp28m99z48"; depends=[boot class dplyr gamlss gamlss_dist magrittr purrr reshape2 tibble tidyr]; }; - chillR = derive2 { name="chillR"; version="0.66"; sha256="1qw9l3drw3r4an1jy2bckaslwla3s5fvpqr7ahvd2m6alx05b0k6"; depends=[fields httr Kendall pls raster readxl RMAWGEN sp XML]; }; - chinese_misc = derive2 { name="chinese.misc"; version="0.1.7"; sha256="1asv4538p42r8mhvkcp0f2h75nq3bwm0v5arwc7masdmpp4fqayn"; depends=[jiebaR Matrix NLP Ruchardet slam stringi tm]; }; + chillR = derive2 { name="chillR"; version="0.70.2"; sha256="01hn2b88ra7kadjylj2y840lpkapm93kdracnamy15c6f5f27kmb"; depends=[fields httr Kendall pls raster RCurl readxl RMAWGEN sp XML]; }; + chinese_misc = derive2 { name="chinese.misc"; version="0.1.8"; sha256="0c2qhdia7wpkv4x2qnq2lyvgnr0n37brd7m579hcl6zq7dw4y2m7"; depends=[jiebaR Matrix NLP Ruchardet slam stringi tm]; }; chipPCR = derive2 { name="chipPCR"; version="0.0.8-10"; sha256="1mff7n7ga4sfwvcq7zkjkrl68nybnm2zkn37hmxvnw9yl3ls9lnw"; depends=[lmtest MASS outliers ptw quantreg Rfit robustbase shiny signal]; }; - chngpt = derive2 { name="chngpt"; version="2017.10-9"; sha256="1vi71nkjn4rmhg5xrfniy29lhgpmn2zbifvgynmsh950lfs08i9h"; depends=[boot kyotil MASS survival]; }; + chngpt = derive2 { name="chngpt"; version="2018.1-3"; sha256="0x4jifap8y4gs7mdzawxyvfdfjg245zak2zljdl6351ppslzaj6z"; depends=[boot kyotil MASS survival]; }; choiceDes = derive2 { name="choiceDes"; version="0.9-1"; sha256="07nnqqczi9p3cffdijzx14sxhqv1imdakj7y94brlr5mbf5i4fl4"; depends=[AlgDesign]; }; - cholera = derive2 { name="cholera"; version="0.2.1"; sha256="0w213qlnkwbs7y1z5kmxicrbimkqlws46w12vadghf96rn1pb4fv"; depends=[deldir HistData igraph pracma RColorBrewer scales sp]; }; + cholera = derive2 { name="cholera"; version="0.3.0"; sha256="08ijini3d4ir26di655315lvs9vjscixpawv8r7499idcb1jz87i"; depends=[alphahull deldir HistData igraph KernSmooth pracma RColorBrewer scales sp]; }; choplump = derive2 { name="choplump"; version="1.0-0.4"; sha256="0fn6m3n81jb7wjdji4v04m53gakjfsj3ksm546xxz5zm7prk237s"; depends=[]; }; chopthin = derive2 { name="chopthin"; version="0.2.2"; sha256="1ixmgq6igd2ji88qba7scny1j8rrizcf76dk4ymk3hah5dln97fz"; depends=[Rcpp]; }; chords = derive2 { name="chords"; version="0.95.4"; sha256="1v6zvl1mv9fyf6hx1fpbj3i7s893n4y1w4j9rw1arps006qz2jqn"; depends=[MASS Matrix]; }; @@ -4804,24 +4905,26 @@ in with self; { choroplethrMaps = derive2 { name="choroplethrMaps"; version="1.0.1"; sha256="0ghqb2d1h0qkbcsll6ck2qk5sfvdwsrlh3phlbsjbak30832j7fr"; depends=[]; }; chromer = derive2 { name="chromer"; version="0.1"; sha256="0fzl2ahvzyylrh4247w9yjmwib42q96iyhdlldchj97sld66c817"; depends=[data_table dplyr httr]; }; chromoR = derive2 { name="chromoR"; version="1.0"; sha256="1x11byr6i89sdk405h6jd2rbvgwrcvqvb112bndv2rh9jnrvcw4z"; depends=[gdata haarfisz]; }; - chron = derive2 { name="chron"; version="2.3-51"; sha256="05aznigw9nwv3hbwjnjbvqhfjqkwsw2csgrjx8500gzr2fvla5w8"; depends=[]; }; + chron = derive2 { name="chron"; version="2.3-52"; sha256="185lfp75cv3l4cavg64sccj8lgc5sivch13n6gkannv3pd5cyzy4"; depends=[]; }; + chunkR = derive2 { name="chunkR"; version="1.1.0"; sha256="1yq37dyc0k00w3579wcw314zdjbr9ybzb2ih8mpbznz4li2pa2br"; depends=[Rcpp]; }; chunked = derive2 { name="chunked"; version="0.4"; sha256="0pqk6nnxxnlsw9zal62ajjalrlmvkdrzyz2l8r10jd7s61vhra40"; depends=[DBI dplyr LaF lazyeval]; }; - ciTools = derive2 { name="ciTools"; version="0.2.1"; sha256="0cbxgn6825rfnjj2rrr9gzh6bwlp8wbh258b3y702z7g3v32dgg8"; depends=[arm boot dplyr lme4 magrittr MASS tibble]; }; - cifti = derive2 { name="cifti"; version="0.4.2"; sha256="1l7dfq53plisyf244l1ch0il0ziy1qcxv0zj3gr4fxdp6k8d1br1"; depends=[base64enc gifti oro_nifti rgl xml2]; }; + ciTools = derive2 { name="ciTools"; version="0.3.0"; sha256="0mqrnln7iz6jm30nh1qb2457icaz3hcqmgqbj8m61z0sf6jj9pd7"; depends=[arm boot dplyr lme4 magrittr MASS tibble]; }; + cifti = derive2 { name="cifti"; version="0.4.5"; sha256="092334lcpkzv52bg53hzx64dnrwq67f3p9fzwchmafx1l46xrqx9"; depends=[gifti oro_nifti R_utils xml2]; }; cin = derive2 { name="cin"; version="0.1"; sha256="1pwvy5nh5nrnysfqrzllb9fcrpddqg02c7iw3w9fij2h8s2v6kq5"; depends=[]; }; cir = derive2 { name="cir"; version="2.0.0"; sha256="0ycjnbikpyhcfdik7c5knw4s9gl8y5h4219c4fhs4axs04np004v"; depends=[]; }; - circlize = derive2 { name="circlize"; version="0.4.2"; sha256="0py82f5v25mi0s4626zbl5br1frdrj3diz2dakar1rz5yn956mdi"; depends=[colorspace GlobalOptions shape]; }; + circlize = derive2 { name="circlize"; version="0.4.3"; sha256="0pg947gkryygikfbv6admx8gsg02b6g219j6a1sdnqij2908yxna"; depends=[colorspace GlobalOptions shape]; }; circular = derive2 { name="circular"; version="0.4-93"; sha256="0hki85rs8wc5950pjaw28q54rly2napfbcrx3pchlfap6wwy5kkn"; depends=[boot mvtnorm]; }; - cit = derive2 { name="cit"; version="2.1"; sha256="1kiph7znr9fiq704wfbms6hsl4shxfqijrlh4dhmik9x9m8sj538"; depends=[]; }; + cit = derive2 { name="cit"; version="2.2"; sha256="1lf8r3r4zwvs08vl4byhw6rvf54nb7vg83558pi0b5866m7in4sc"; depends=[]; }; citbcmst = derive2 { name="citbcmst"; version="1.0.4"; sha256="1zkd117h9nahwbg5z6byw2grg5n3l0kyvv2ifrkww7ar30a2yikl"; depends=[]; }; citccmst = derive2 { name="citccmst"; version="1.0.2"; sha256="1b7awn1hjckxisfdi4ck697hwd4a5sqklwi7xzh6kgqhk9pv7vjn"; depends=[]; }; citr = derive2 { name="citr"; version="0.2.0"; sha256="1nzn0yw74k6zkwzb6spfzqkj3cbx6ry6ypbsnhy6w2flabnnvy4v"; depends=[assertthat curl miniUI RefManageR rstudioapi shiny yaml]; }; - civis = derive2 { name="civis"; version="1.1.1"; sha256="1ywqdfcxpzgvnwriswjyad3qssr4v0i9glpgnh73vx67vy738090"; depends=[DBI dbplyr devtools dplyr future ggplot2 httr jsonlite lubridate memoise purrr roxygen2 stringr testthat]; }; + civis = derive2 { name="civis"; version="1.2.0"; sha256="10idsjq5grg9mw18f8v2wqz1rg95s12dsfglkrg7jar1782yq822"; depends=[DBI dbplyr devtools dplyr future ggplot2 httr jsonlite lubridate memoise purrr roxygen2 stringr testthat]; }; cjoint = derive2 { name="cjoint"; version="2.0.6"; sha256="1bhzw751ll43qbyif589yxmi3m1pbm206lqnsc5zcxsnxjf4li5n"; depends=[ggplot2 lmtest Matrix sandwich survey]; }; ck37r = derive2 { name="ck37r"; version="1.0.0"; sha256="0nn2sfsfs8mhgjrz0ghn041ybhj2qim4rs3lkci7s4n95c8hbgdi"; depends=[caret cvAUC doParallel doSNOW foreach ggplot2 pryr randomForest RANN reader RhpcBLASctl ROCR snow stringr SuperLearner tmle]; }; ckanr = derive2 { name="ckanr"; version="0.1.0"; sha256="1cvn0cih763f0ppl1y90vnwj3cgqyb7az89sn12nyn2qb6igiqyl"; depends=[httr jsonlite magrittr]; }; clValid = derive2 { name="clValid"; version="0.6-6"; sha256="1l9q7684vv75jnbymaa10md13qri2wjjg7chr1z1m0rai8iq3xxw"; depends=[class cluster]; }; cladoRcpp = derive2 { name="cladoRcpp"; version="0.14.4"; sha256="0d4vl7xrrwbhhx56ymw52rb5svw9nskxdya4dl04lw1qxc45p4jy"; depends=[Rcpp RcppArmadillo]; }; + clam = derive2 { name="clam"; version="2.3.1"; sha256="1n30fvx4macyawhzv17bzvc1s4qdn51p9mx28apfjbf80qck24g9"; depends=[]; }; clampSeg = derive2 { name="clampSeg"; version="1.0-1"; sha256="0y0yxdv75xqmv7v6q8q8v1qj6xr8i7ik4nkh759rpyn0da7qq076"; depends=[Rcpp stepR]; }; clarifai = derive2 { name="clarifai"; version="0.4.2"; sha256="0igi4xl27nz0r85hpws2zfc2gn5z2nmywp3saxgp74mh2y99lg6s"; depends=[curl jsonlite]; }; class = derive2 { name="class"; version="7.3-14"; sha256="173b8a16lh1i0zjmr784l0xr0azp9v8bgslh12hfdswbq7dpdf0q"; depends=[MASS]; }; @@ -4834,24 +4937,25 @@ in with self; { classyfire = derive2 { name="classyfire"; version="0.1-2"; sha256="0rar3mi2m1wf14lmahjbpdh1jlnisvgsbx86xbqlb8c0f8zfzxq3"; depends=[boot e1071 ggplot2 neldermead optimbase snowfall]; }; cld2 = derive2 { name="cld2"; version="1.1"; sha256="0zlvnnyz5aqjwzxwghfs9pyxcgr86yg3wpmrdg85dnlggjh2j12z"; depends=[Rcpp]; }; cld3 = derive2 { name="cld3"; version="1.0"; sha256="0qka14z9w01b7xy6k97qcgd9qi6myfaw61imnf09mc8nqm0z3kya"; depends=[Rcpp]; }; - cleanEHR = derive2 { name="cleanEHR"; version="0.1"; sha256="1ppjg72cfh9kdwl8kk7zxyr529xqcwpfcl5lisy7hgpqirma52qn"; depends=[data_table ggplot2 knitr pander Rcpp XML yaml]; }; - cleanNLP = derive2 { name="cleanNLP"; version="1.10.0"; sha256="127h5aycgwzm8cdgy1ybabviisj4lbb029c8p1czzfwcdvxzpf8s"; depends=[dplyr Matrix readr stringi]; }; + cleanEHR = derive2 { name="cleanEHR"; version="1.0"; sha256="0i8q7y4izc7q1pshdajy0n9wyihj4wlzzkd52ykam3dxqnwlnyh4"; depends=[data_table ggplot2 knitr pander Rcpp XML yaml]; }; + cleanNLP = derive2 { name="cleanNLP"; version="2.0.3"; sha256="0hmivb2yhj47alxc9z1hlk23hfan9vz938m6xyp639xf58l97scz"; depends=[dplyr Matrix stringi]; }; cleangeo = derive2 { name="cleangeo"; version="0.2-2"; sha256="1bhpn53v36652mwg2ba2a6cs34slb7i0df2ibssyr2lnx5gciq4i"; depends=[maptools rgeos sp]; }; cleanr = derive2 { name="cleanr"; version="1.1.3"; sha256="0vf2c2inb729kzmpxaznqa2zwj80j1ix9198gc36zq41ag5pd7jk"; depends=[checkmate]; }; clere = derive2 { name="clere"; version="1.1.4"; sha256="1nk3chcnaa4y1c5rr6c3bapvi106ikbk9grqcq6s6j0imny1jp4a"; depends=[lasso2 Rcpp RcppEigen]; }; + clespr = derive2 { name="clespr"; version="1.0.1"; sha256="0f1vcd4y2ixpwywp5mi9jvf6r1099ajqba9sbkq7rc6f0y32wcpj"; depends=[AER doParallel foreach magic MASS pbivnorm survival]; }; clhs = derive2 { name="clhs"; version="0.5-7"; sha256="0n7zy8wf78lka1l0zm42zxwi24bvavfy3irfqcnz5nslqkg61il2"; depends=[ggplot2 plyr raster reshape2 scales sp]; }; cli = derive2 { name="cli"; version="1.0.0"; sha256="07as3dr7vwx02p3qgzlmxz1dlrd3x3lysrzp222ip9jcjpydp8wg"; depends=[assertthat crayon]; }; clickR = derive2 { name="clickR"; version="0.3.38"; sha256="1qlc4lz2y2ls5qx1rqiswl5qr5qqkn6l30cp5ikhzr3ffvwp3nym"; depends=[beeswarm boot brms lme4 lmerTest ReporteRs xtable]; }; - clickstream = derive2 { name="clickstream"; version="1.2.1"; sha256="1wan098mp2ml194al616h9qvv69q5l19218ja2x9j1qdq9dgp978"; depends=[arules ClickClust data_table ggplot2 igraph linprog plyr reshape2 Rsolnp]; }; + clickstream = derive2 { name="clickstream"; version="1.3.0"; sha256="01bii527xy7hdph1pm6f1g4qnwa5yf3mwz01rjg1h2gc12s5vzgg"; depends=[arules ClickClust data_table ggplot2 igraph linprog MASS plyr reshape2 Rsolnp]; }; clifro = derive2 { name="clifro"; version="3.1-5"; sha256="1fbl5zljy60xp3klrsgs84rqw9484xmyq84n3wkrqc6pyvhskp4c"; depends=[ggplot2 lubridate RColorBrewer RCurl reshape2 scales selectr XML]; }; clikcorr = derive2 { name="clikcorr"; version="1.0"; sha256="0zdnbcl5q293mmm6pbn4ri7p1q6z6sff74axsb3nyd153v2xamr5"; depends=[mvtnorm]; }; climatol = derive2 { name="climatol"; version="3.0"; sha256="0wfqs8yk3m6wpm86yfhsg100d4x67bzz1871mxrs69r6ybrh30qx"; depends=[]; }; climbeR = derive2 { name="climbeR"; version="0.0.1"; sha256="10i74bph7dhv2xj01qdhymlmfwj32lzxivanif11zmzmq9p5bqsw"; depends=[ggplot2]; }; climdex_pcic = derive2 { name="climdex.pcic"; version="1.1-6"; sha256="0dyhqxrma8g4ny4afv6drr885m88q2b8g1n19yy3yjbrbddyz8yl"; depends=[caTools PCICt Rcpp]; }; clime = derive2 { name="clime"; version="0.4.1"; sha256="0qs9i7cprxddg1cmxhnmcfhl7v7g1r519ff2zfipxbs59m5xk9sf"; depends=[lpSolve]; }; - climextRemes = derive2 { name="climextRemes"; version="0.1.3"; sha256="0nf885qsph2sygikw7hf4icq98393smamxkjahdxciv539a0cgvm"; depends=[extRemes]; }; - climtrends = derive2 { name="climtrends"; version="1.0.6"; sha256="01007b0av9kv6rx2kkp5y39xkk5nqsyqbxa5z43qdq5zgf5pwvd9"; depends=[]; }; + climextRemes = derive2 { name="climextRemes"; version="0.2.0"; sha256="0cjvmd48iaid0f95354zpxlgwy79jga9lz0p82yiv0fb2mvjpbqn"; depends=[boot extRemes]; }; climwin = derive2 { name="climwin"; version="1.2.0"; sha256="0xqgf9hmpidxq85rfm0vndh3waw0qf2yhrzmp04sqbbqhzkf9v7n"; depends=[evd ggplot2 gridExtra lme4 lubridate Matrix MuMIn nlme numDeriv plyr RcppRoll reshape]; }; + clinDR = derive2 { name="clinDR"; version="1.7"; sha256="0xnrnmwg4y2vlxsmhj5pzpyiqk90xjxl91i9nn3lv90xszmdh0x2"; depends=[doParallel DoseFinding foreach ggplot2 rstan]; }; clinPK = derive2 { name="clinPK"; version="0.9.0"; sha256="1n1m8szd8mxdshwz8l3hfdxi7zrmsah46kxkv7jiffwnfhijfhsm"; depends=[curl testit]; }; clinUtiDNA = derive2 { name="clinUtiDNA"; version="1.0"; sha256="0x3hb09073gkh60fc8ia0sfk948sm6z6j8sqkz275k4m8ryrabas"; depends=[]; }; clinfun = derive2 { name="clinfun"; version="1.0.14"; sha256="13ip144qzgx9bg9pvdgz7y4v21sjvyjjixbm8mnvn6a6k62ycgmf"; depends=[mvtnorm]; }; @@ -4861,6 +4965,7 @@ in with self; { clogitL1 = derive2 { name="clogitL1"; version="1.4"; sha256="0m9yrg9mzzfv5qkdf6w55xyrjdghyrf27kk7b4x2gyvwvi5b7dkm"; depends=[Rcpp]; }; clogitLasso = derive2 { name="clogitLasso"; version="1.0.1"; sha256="1mm815w31n0jvbh2rwq15ja1mzvjaz1x846xq1949aj4pb692zrl"; depends=[foreach lassoshooting]; }; clogitboost = derive2 { name="clogitboost"; version="1.1"; sha256="19wcb7229amlxn6xahxj6pf9rwfm02s7qkxz2yvyhnq95y0clxkm"; depends=[Rcpp]; }; + clordr = derive2 { name="clordr"; version="1.0.2"; sha256="1jpkspppwcsflr7pz45zd8vnpax1idmkvfcai63vqik4ig0snfaj"; depends=[MASS numDeriv pbivnorm]; }; cloudUtil = derive2 { name="cloudUtil"; version="0.1.12"; sha256="18g946j00anlk20d0fh01w0xyj1kwyy7jhlgz5a85wmp6s2gkz74"; depends=[]; }; clpAPI = derive2 { name="clpAPI"; version="1.2.7"; sha256="19bn5d7qjj7g0x17jnh2snymcn2r2skzj35hkhsgcj5r43834f3r"; depends=[]; }; clttools = derive2 { name="clttools"; version="1.3"; sha256="0va9k1b4xsb2sgpxzvid6sa8m6b8i3r4kgghclmb78nnrs480cwi"; depends=[]; }; @@ -4868,11 +4973,11 @@ in with self; { clue = derive2 { name="clue"; version="0.3-54"; sha256="1fnl1wi0g8f243ra5krlpyz69pg8s8m2wwxa53hb086k7hqv74af"; depends=[cluster]; }; clues = derive2 { name="clues"; version="0.5.9"; sha256="0znlsbfmnz5wkp2cswrkjbgchdmmf7h78mv2zwx382m9n9n9hshy"; depends=[]; }; clusrank = derive2 { name="clusrank"; version="0.5-2"; sha256="168xad5dyz46yxm139q09n9vp1304yrhikxz5bcfzhm3psyv5fbf"; depends=[MASS Rcpp]; }; - clust_bin_pair = derive2 { name="clust.bin.pair"; version="0.0.6"; sha256="0hmj85byw1j1b1crb7nj12wz0rddp5cg21jg1dwg7b0mn5xvy981"; depends=[]; }; - clustEff = derive2 { name="clustEff"; version="0.1.1"; sha256="149x9m9x1yxh48ky54gyzps4pdh4jq36bz59ri3xd6v19i8r1ws3"; depends=[cluster fda qrcm]; }; + clust_bin_pair = derive2 { name="clust.bin.pair"; version="0.1.2"; sha256="11lqd3vmx4kg08n6iv9na8rra49dkldx4f8jyf43hppbjrbvfinm"; depends=[]; }; + clustEff = derive2 { name="clustEff"; version="0.1.2"; sha256="1hy7jc8yfg554l439lfrppdsizrdmvxrqf9dwbkjckbvggg54f0k"; depends=[cluster fda qrcm]; }; clustMD = derive2 { name="clustMD"; version="1.2.1"; sha256="0w4s9dab2mm5x0xibyl6s101c64if945a2cmwin9psd95p76mcny"; depends=[ggplot2 MASS mclust msm mvtnorm reshape2 truncnorm viridis]; }; clustMixType = derive2 { name="clustMixType"; version="0.1-29"; sha256="01rc84ppy5mw3cdcx15xs6061lg1mwh6kxa80rnj3ax3g10x37sh"; depends=[RColorBrewer]; }; - clustRcompaR = derive2 { name="clustRcompaR"; version="0.1.0"; sha256="1md1ra18q1iga01q12jyy9va4qyvzlybvbdrdfy2kxhh82w057ww"; depends=[dplyr ggplot2 ppls quanteda tidyr]; }; + clustRcompaR = derive2 { name="clustRcompaR"; version="0.2.0"; sha256="151xq8qf1mrl35kyhdliwl2jpdkpkbl3gdnrvrybanihry2p0kqg"; depends=[dplyr ggplot2 ppls quanteda]; }; cluster = derive2 { name="cluster"; version="2.0.6"; sha256="1z4gbz7chxxi4ly6c0yjlikwgf8aa8dlg05cn5cd6pjr21zvh97l"; depends=[]; }; cluster_datasets = derive2 { name="cluster.datasets"; version="1.0-1"; sha256="0i68s9305q08fhynpq24qnlw03gg4hbk4184z3q3ycbi8njpr4il"; depends=[]; }; clusterCrit = derive2 { name="clusterCrit"; version="1.2.7"; sha256="13smdm8dmp4795qqn8an3k22l7xs4i4kgazyjzxdbzkg742akk7q"; depends=[]; }; @@ -4881,11 +4986,12 @@ in with self; { clusterPower = derive2 { name="clusterPower"; version="0.6.111"; sha256="1mwq188x9d495my75cdcahfjm3w46cas9jqxks5c0j63395cw9g3"; depends=[lme4]; }; clusterRepro = derive2 { name="clusterRepro"; version="0.5-1.1"; sha256="0vsf6cq6d51a4w23ph8kdz2h8dfpzyd6i85049p2wakn1kdvkz5p"; depends=[]; }; clusterSEs = derive2 { name="clusterSEs"; version="2.4.1"; sha256="04f30zsk96yv7c77darfqkkqw4ij4cq8r438lzlb1l063kpaclh4"; depends=[AER Formula lmtest mlogit plm sandwich]; }; - clusterSim = derive2 { name="clusterSim"; version="0.46-2"; sha256="1l8hcqkz2p8gbnfz8fdb64fk0mbfxx8b725f3pz77c7bjrx4s4l1"; depends=[ade4 cluster e1071 MASS modeest R2HTML rgl]; }; + clusterSim = derive2 { name="clusterSim"; version="0.47-1"; sha256="0k9cn0ycz7l9g4lb434cqp9yx2ilmp25xa5hlhma9jmxlbdsbji2"; depends=[ade4 cluster e1071 MASS modeest R2HTML rgl]; }; + clusteredinterference = derive2 { name="clusteredinterference"; version="1.0.0"; sha256="1dnbymivxkrhx39maannhvm8ynlgjxsiavd2d9ych5nq4mjvhnjg"; depends=[cubature Formula lme4 numDeriv rootSolve]; }; clusterfly = derive2 { name="clusterfly"; version="0.4"; sha256="0mxpn7aywqadyk43rr7dlvj0zjcyf4q7qbqw5ds38si7ik34lkrg"; depends=[e1071 plyr reshape2 rggobi RGtk2]; }; clusterhap = derive2 { name="clusterhap"; version="0.1"; sha256="1ic6588mqp146jsvrxlxk449zw4n81xixgrny9r29497z7hg5a1m"; depends=[]; }; clustering_sc_dp = derive2 { name="clustering.sc.dp"; version="1.0"; sha256="0cppka7613cbjjf1q2yp6fln511wbqdhh8d4gs6p0fbq379kzmvc"; depends=[]; }; - clustermq = derive2 { name="clustermq"; version="0.8.1"; sha256="1wip3571j22mxi4jd3v5mb4fk8w89hiyfsvwxfbg6zn3r9m8yx4x"; depends=[infuser narray purrr R6 rzmq]; }; + clustermq = derive2 { name="clustermq"; version="0.8.3"; sha256="1w5gklz7dw26861dqnvvm9hismn6p4wjw4hi0kf37p5hjq7cvfjh"; depends=[infuser narray purrr R6 rzmq]; }; clusternomics = derive2 { name="clusternomics"; version="0.1.1"; sha256="05nkw6h2dvky07fj50myzw5xlkqyiflbn4vwqw8a1q2idv4awi7b"; depends=[magrittr MASS plyr]; }; clustertend = derive2 { name="clustertend"; version="1.4"; sha256="1aqg8cy1hk3lmzvyqh9qc1mcknrva2i0c77hyd0yff9whz80ik4j"; depends=[]; }; clusteval = derive2 { name="clusteval"; version="0.1"; sha256="1ld0bdl4fy8dsfzm3k7a37cyxc6pfc9qs31x4pxd3z5rslghz7rj"; depends=[mvtnorm Rcpp]; }; @@ -4901,37 +5007,38 @@ in with self; { cmprsk = derive2 { name="cmprsk"; version="2.2-7"; sha256="1imr3wpnj4g57n2x4ryahl4lk8lvq9y2r7319zv3k82mznha8bcm"; depends=[survival]; }; cmprskQR = derive2 { name="cmprskQR"; version="0.9.1"; sha256="002s6ls670sdzrxgqv9gbl646b675q1gn6dzkngnf6rgcdqwid7n"; depends=[quantreg survival]; }; cmrutils = derive2 { name="cmrutils"; version="1.3"; sha256="0zjc0bwp2p03hmnj3zjw7800pcdw8b8161y68npyp3hya0s4i9x0"; depends=[chron]; }; - cmsaf = derive2 { name="cmsaf"; version="1.8.1"; sha256="0fcm3nqlydlsn1hsm1lrxq7jmmwf8kjqcxfhflsgmd4l0s06pr15"; depends=[fields ncdf4 raster sp]; }; + cmsaf = derive2 { name="cmsaf"; version="1.9.0"; sha256="1r0cny0i3wi3xfi38l5ls6zycnp0q1a0s00qrdgi1956yrmnm5x1"; depends=[fields ncdf4 raster sp]; }; cmvnorm = derive2 { name="cmvnorm"; version="1.0-3"; sha256="0810kzg78yaxzniq59a4swvdk9qxp37ja52f5n1zssgn0cwz1vk9"; depends=[elliptic emulator]; }; cna = derive2 { name="cna"; version="2.0.0"; sha256="0cfr4g63wwqkkz2xxz76m82p0am2kyazal6sqp7gnrc48x9lv8im"; depends=[Rcpp]; }; cnbdistr = derive2 { name="cnbdistr"; version="1.0.1"; sha256="05qi41jimslbngjgbwzfda0q25hb28ax79v9yckvrbpgjc8dk990"; depends=[hypergeo]; }; cncaGUI = derive2 { name="cncaGUI"; version="1.0"; sha256="1v55kvrc05bsm1qdyfw3r3h64wlv3s6clxbr8k512lfk99ry42kn"; depends=[MASS plotrix rgl shapes tcltk2 tkrplot]; }; - cnmlcd = derive2 { name="cnmlcd"; version="1.0-0"; sha256="0kbq01qrmpn133v18rjphhznpnj8g6dcn1lrbsjykhxkqz086s36"; depends=[lsei]; }; + cnmlcd = derive2 { name="cnmlcd"; version="1.2-0"; sha256="1vpn926wf8vkifscnb35y4c74721iar2wykrl50fcv0fg16yggnd"; depends=[lsei]; }; coRanking = derive2 { name="coRanking"; version="0.1.3"; sha256="1ss00l0c99fi9p6gcimb31nrl5iflps6lvplnjjqwcqjkb2pjh9p"; depends=[Rtsne scatterplot3d]; }; coala = derive2 { name="coala"; version="0.5.2"; sha256="1rj9my20ba79alkhszh5lfvb9gjr6vcgiwqk2szawkpd1np3lpsr"; depends=[assertthat digest R6 Rcpp RcppArmadillo rehh scrm]; }; coalescentMCMC = derive2 { name="coalescentMCMC"; version="0.4-1"; sha256="0xxv1sw5byf84wdypg5sfazrmj75h4xpv7wh4x5cr9k0vgf80b3s"; depends=[ape coda lattice Matrix phangorn]; }; coarseDataTools = derive2 { name="coarseDataTools"; version="0.6-3"; sha256="0f1fkpmqq142yrqzbqv11s5q4jkq7dilmrllcns871hc6vah6ikd"; depends=[MCMCpack]; }; - cobalt = derive2 { name="cobalt"; version="3.1.0"; sha256="1ip300qw128v2rlssfbmqa4bp26p1s0dswdqcjwxmzx4slasm3hd"; depends=[ggplot2 ggstance]; }; cobs = derive2 { name="cobs"; version="1.3-3"; sha256="1pqvz7czcchri4x79g78hbwyagb3bqzdqb047zkbdinyz067c7kb"; depends=[quantreg SparseM]; }; cocor = derive2 { name="cocor"; version="1.1-3"; sha256="106zyrrypil8jyg0pva5zj4hgb53z81nca3d0mh2q3j55zq3wl12"; depends=[]; }; cocoreg = derive2 { name="cocoreg"; version="0.1.1"; sha256="0jrrkak964pl1vih592jgqgl6bw08j0fa1rh3j85x64bqq4m7278"; depends=[abind CCAGFA combinat e1071 ggplot2 glmnet gridExtra MASS multiway pls reshape RGCCA]; }; cocorresp = derive2 { name="cocorresp"; version="0.3-0"; sha256="1r1ssz0cip1gk52nkbr1kpz8gwrg6lwri8ymk41xj2adlsp576v2"; depends=[vegan]; }; cocron = derive2 { name="cocron"; version="1.0-1"; sha256="0dl14y9v9kndy5gzhhbhq3f31ja724y1hra40givy6bij7h2cj30"; depends=[]; }; coda = derive2 { name="coda"; version="0.19-1"; sha256="14a4a8df4ygj05h37chmdn8kzcqs07fpbflxfrq530563mrza7yl"; depends=[lattice]; }; - coda_base = derive2 { name="coda.base"; version="0.1.7"; sha256="1rjw5d76vxl0fx0675q994l8wwbfv8az5kzqj4g9xmgbj8iwdhan"; depends=[MASS Rcpp RcppArmadillo]; }; + coda_base = derive2 { name="coda.base"; version="0.1.8"; sha256="05bbmfswajmjc8l3g2clwj3hyj06y9v7camq910b881frl2xj584"; depends=[MASS Rcpp RcppArmadillo]; }; codadiags = derive2 { name="codadiags"; version="1.0"; sha256="1x243pn6qnkjyxs31h1hxy8x852r0fc952ww77g40qnrk8qw79xg"; depends=[coda]; }; - codep = derive2 { name="codep"; version="0.6-5"; sha256="18da81wja7z9gnn11xiwi7cg43mrj4w2kjkk8s780krbycnfsn5p"; depends=[]; }; + codemetar = derive2 { name="codemetar"; version="0.1.4"; sha256="0klwwf4ws2l15iq33d3jk7whp4inql6if7yai5z7493zs9c30z3x"; depends=[devtools git2r jsonld jsonlite readr stringi]; }; + codep = derive2 { name="codep"; version="0.7-1"; sha256="1icj9mijp3x93rn7xbi0aivj7r4rlgiclsa920b1x9ws8b3jrv06"; depends=[]; }; codetools = derive2 { name="codetools"; version="0.2-15"; sha256="0h7sjmvvsi35041jp47cxhsqzgf1y8jrw6fxii7n26i8g7nrh1sf"; depends=[]; }; - codingMatrices = derive2 { name="codingMatrices"; version="0.3.1"; sha256="09jr163n886qnw2hy8fvdvaw2w8n1752z7yrwy2bqrpfj3cw93yh"; depends=[fractional Matrix]; }; + codingMatrices = derive2 { name="codingMatrices"; version="0.3.2"; sha256="0kldx2h3mksw4644d0ask6ij7i63rrwk0njlsvkbdjz3bf7pdv1b"; depends=[fractional Matrix]; }; codyn = derive2 { name="codyn"; version="1.1.0"; sha256="0s8ssaq59vddilz0fin9sgr8fir70c220cffbsy2l0qn34q48627"; depends=[assertthat permute]; }; coefficientalpha = derive2 { name="coefficientalpha"; version="0.5"; sha256="0pfw64z7f0gp415nn7519rcw829a7wnwnjx94sc55jsvgb1di3kc"; depends=[lavaan rsem]; }; - coefplot = derive2 { name="coefplot"; version="1.2.4"; sha256="0phpz4fvvxvpaybp4q1s69qxcpdzj8qxambivncps101mz7jj3sq"; depends=[ggplot2 plyr reshape2 useful]; }; + coefplot = derive2 { name="coefplot"; version="1.2.6"; sha256="036njf2xwmjvyamanb7nfn2n09ps2rdgk3zrxn6khwp8ly245nps"; depends=[dplyr dygraphs ggplot2 magrittr plyr purrr reshape2 tibble useful]; }; coenocliner = derive2 { name="coenocliner"; version="0.2-2"; sha256="0r4h0r3av2d1cxmjpwaabjn807626pzqnra2x542wdnnf7h8nmdf"; depends=[]; }; coenoflex = derive2 { name="coenoflex"; version="2.2-0"; sha256="06f75spl4wkbgicm0bksnid2lb1gkvi05915wn5y4km45d82fkkr"; depends=[mgcv]; }; coexist = derive2 { name="coexist"; version="1.0"; sha256="15ydhrx996i6caa0360c2bgn2zvgwfg5wdhsqq1gvrggs15w7nml"; depends=[]; }; - cofeatureR = derive2 { name="cofeatureR"; version="1.0.1"; sha256="1nxdi97b37pw5xr6cib8hjgziazmy9lfbjgixn9ayacvdhkjs7ib"; depends=[dplyr ggplot2 lazyeval]; }; - coga = derive2 { name="coga"; version="0.2.1"; sha256="0cb9hvrlhm8c9fjmg4s577r46lp6xj9g0amwd5n9j2vs4m2h8dnf"; depends=[Rcpp RcppGSL]; }; + cofeatureR = derive2 { name="cofeatureR"; version="1.1.0"; sha256="1yz73541zsasw4k08b94vkhhs9ilchgpi5mrn4a0cqhb52il73sz"; depends=[dplyr ggplot2 lazyeval]; }; + coga = derive2 { name="coga"; version="0.2.2"; sha256="0zbcx5g48168clvy8n4pp7pmvx0xlqfwr10fp34wf1k0j08smzx3"; depends=[Rcpp RcppGSL]; }; coin = derive2 { name="coin"; version="1.2-2"; sha256="1fq58793bymzig1syjg2lvn6hsxfwkhh00jfrchh3c0y7rfhc66m"; depends=[modeltools multcomp mvtnorm survival]; }; + coindeskr = derive2 { name="coindeskr"; version="0.1.0"; sha256="0iwkg9qx5gymzjxw3w1zlwq9336kbqp4z8a9wf9a1p2gp9727qcm"; depends=[httr jsonlite]; }; coinmarketcapr = derive2 { name="coinmarketcapr"; version="0.1"; sha256="006ndsj37rx7fg3laama9y3xc6ivhp6b67w4wf3g161ypphlhkxv"; depends=[ggplot2 jsonlite RCurl]; }; cointReg = derive2 { name="cointReg"; version="0.2.0"; sha256="0n4s809avhlrmrjdqzc2s752m7x96c4432gnjd4qv77r2nns7dw4"; depends=[checkmate MASS matrixStats]; }; cointmonitoR = derive2 { name="cointmonitoR"; version="0.1.0"; sha256="0rsacvib9prgb199m5ndi0zlgfsvf1giqc5s41wp0yvxdxjdq5lw"; depends=[cointReg matrixStats]; }; @@ -4942,12 +5049,12 @@ in with self; { collpcm = derive2 { name="collpcm"; version="1.0"; sha256="15k6khsgikjpsasyz02bhgd43nij2n7nl0m0sgxvjlcn0nv95y2n"; depends=[latentnet network vegan]; }; coloc = derive2 { name="coloc"; version="2.3-1"; sha256="1j3m9afpkm0bzib38yqvk85b6s6l56s6j2ni96gii4a06r87ig60"; depends=[BMA colorspace MASS]; }; colorRamps = derive2 { name="colorRamps"; version="2.3"; sha256="0shbjh83x1axv4drm5r3dwgbyv70idih8z4wlzjs4hiac2qfl41z"; depends=[]; }; - colorSpec = derive2 { name="colorSpec"; version="0.6-1"; sha256="0mi4dg2iq3a7gfdgwfxwchmfqjakrpdfms6j77ssas8lyq3ydcsi"; depends=[MASS]; }; + colorSpec = derive2 { name="colorSpec"; version="0.6-2"; sha256="153jps1l0wv0b726b0l7bhsg7g45jdfsralg6k8nvyij4yw1dqi1"; depends=[MASS]; }; colordistance = derive2 { name="colordistance"; version="0.8.0"; sha256="0fqj8apgfvk021cs1m79nk9kx294zxbj55jqylcrg3hadxy4plkf"; depends=[abind ape clue emdist gplots jpeg magrittr mgcv plotly png scatterplot3d spatstat]; }; coloredICA = derive2 { name="coloredICA"; version="1.0.0"; sha256="1xj4dsrwgqzm2644nk3y8nj47m036b4ylh6v60jccj3707spb32r"; depends=[MASS]; }; - colorednoise = derive2 { name="colorednoise"; version="0.0.1"; sha256="0mc9mb20lpk0x4ig5f605hal0aq2cwmmndfxkxlgsamd32wf884d"; depends=[dplyr purrr]; }; + colorednoise = derive2 { name="colorednoise"; version="0.0.2"; sha256="0y2a86fwndcgkaxr4jmls7a9d1ipij4zi3r4nchwda0bynlw6mq4"; depends=[dplyr purrr Rcpp]; }; colorfulVennPlot = derive2 { name="colorfulVennPlot"; version="2.4"; sha256="01b3c060fbnap78h9kh21v3zav547ak2crdkvraynpd2096yk51w"; depends=[]; }; - colorhcplot = derive2 { name="colorhcplot"; version="1.0"; sha256="1hxh09sg9mdbfz4vx2z9wyx9xs5a82l8sw1wbwaa717a6q3ayjyj"; depends=[]; }; + colorhcplot = derive2 { name="colorhcplot"; version="1.3.1"; sha256="009pyyb30kwshldd7v7zfy5rxys6i0dhlc5w8ail61acbg4rlrmz"; depends=[]; }; colormap = derive2 { name="colormap"; version="0.1.4"; sha256="0032ji9n8pivl70jppq989fgg781wil8zag7pfl1hs9xrpin8asy"; depends=[ggplot2 stringr V8]; }; colorpatch = derive2 { name="colorpatch"; version="0.1.2"; sha256="18p9hgccp37pbdf437xffkv6z500896v08fsw2jm8zcl9ladygaf"; depends=[colorspace ggplot2 gridExtra TSP]; }; colorplaner = derive2 { name="colorplaner"; version="0.1.3"; sha256="0mqqk59yjklbc7a0n7jgyhj458622dfdsa1101a5w6kwppbjvnfg"; depends=[digest ggplot2 gtable scales]; }; @@ -4962,22 +5069,23 @@ in with self; { colt = derive2 { name="colt"; version="0.1.1"; sha256="028jqvgr14ig8jxp8h2lrf7mainzppgqh6v1479qfv4l9is3bnwy"; depends=[crayon]; }; comato = derive2 { name="comato"; version="1.0"; sha256="03jnvv0sczy13r81aljhj9kv09sl5hrs0n5bn3pdi7ba64zgbjiw"; depends=[cluster clusterSim gdata igraph lattice Matrix XML]; }; combinat = derive2 { name="combinat"; version="0.0-8"; sha256="1h9hr88gigihc4na7lb5i7rn4az1xa7sb34zvnznaj6pdrmwy4qm"; depends=[]; }; - combiter = derive2 { name="combiter"; version="1.0.2"; sha256="159q7zh6bafh10mjjvl641gbxqhv5car62k8hjg9v7wflaqw7rab"; depends=[iterators itertools Rcpp]; }; + combiter = derive2 { name="combiter"; version="1.0.3"; sha256="11pcvrpbvkzkjwks2z6ww7s9d5fkh8zl0jw52a5ya3y1wkqcs3n6"; depends=[iterators itertools Rcpp]; }; comclim = derive2 { name="comclim"; version="0.9.4"; sha256="0m6ynccscsrrq70p0drwrwxp4skc630kv1l5smh48pi8kagahj1g"; depends=[]; }; - cometExactTest = derive2 { name="cometExactTest"; version="0.1.3"; sha256="08ck1cv5apzn379j6mm2gmhm4qj18418crmqbbp46d80waf0ghxq"; depends=[dplyr]; }; + cometExactTest = derive2 { name="cometExactTest"; version="0.1.5"; sha256="0ar9axm9cd1wd937xcmsmd7xqilnfyab8gsrpkiqpc3fjh86qyrp"; depends=[dplyr]; }; comf = derive2 { name="comf"; version="0.1.7"; sha256="1waxapw870fssmy9mzzpslypbal7vanlajzv9ffnsh5w2yzjdpfi"; depends=[plyr]; }; commandr = derive2 { name="commandr"; version="1.0.1"; sha256="1d6cha5wc1nx6jm8jscl7kgvn33xv0yxwjf6h3ar3dfbvi4pp5fk"; depends=[]; }; commentr = derive2 { name="commentr"; version="1.0.4"; sha256="0anlcbk8rj0yr8i23qmr6v5ws0695nkc3mvgr6pnq1fg2d4c4brj"; depends=[stringr]; }; commonmark = derive2 { name="commonmark"; version="1.4"; sha256="1vb8r9khpvcf0q7acv8rsplfjjwcll302bg5kp596cvn6aacypl6"; depends=[]; }; commonsMath = derive2 { name="commonsMath"; version="1.1"; sha256="0v9jlk75ihh8yjhq5ybighvndp0hn1d6rqh78jkh4g6ylhbpvcw0"; depends=[]; }; + comorbidity = derive2 { name="comorbidity"; version="0.0.3"; sha256="1j991wjavgalpwsjzb6bq2h2my1p7mvw8ziqka3kzr173plgmkq7"; depends=[checkmate]; }; compHclust = derive2 { name="compHclust"; version="1.0-3"; sha256="0agay7rn5mrw07imz4l547b7m9pfcg3rhz4krfxrvg1q2z2kryvj"; depends=[]; }; compactr = derive2 { name="compactr"; version="0.1"; sha256="0f2yds6inmx0lixj08ibqyd2i61l2cbg1ckgpb8dl2q7kcyyd6mx"; depends=[]; }; compare = derive2 { name="compare"; version="0.2-6"; sha256="0k9zms930b5dz9gy8414li21wy0zg9x9vp7301v5cvyfi0g7xzgw"; depends=[]; }; compareC = derive2 { name="compareC"; version="1.3.1"; sha256="0dachfr23lps2jj1y5gc958k54vskmww84gdgk4amihsdgjsnphg"; depends=[]; }; compareDF = derive2 { name="compareDF"; version="1.2.0"; sha256="09y8bh9d9m2pf9j7qqyk1s07pp7rgbhzbkswl12vnx2cm24lp525"; depends=[dplyr htmlTable tidyr]; }; - compareGroups = derive2 { name="compareGroups"; version="3.3.1"; sha256="1sb7acmsdw6zzczksiwh95q6hjf37hqi22njlfdxi233k3ad554y"; depends=[epitools gdata HardyWeinberg Hmisc knitr rmarkdown SNPassoc survival xtable]; }; + compareGroups = derive2 { name="compareGroups"; version="3.3.3"; sha256="18v5as6037ndihsslk25455y553wcbrdriav1p6zbbc52lqcf0a3"; depends=[epitools gdata HardyWeinberg Hmisc knitr rmarkdown SNPassoc survival xtable]; }; compareODM = derive2 { name="compareODM"; version="1.2"; sha256="019hq8j56asjvh4x1p65785mf38xr05j3by0749gl9k9yl8645da"; depends=[XML]; }; - comparer = derive2 { name="comparer"; version="0.1.0"; sha256="134iflpsa5s9md4jhnbggrycgndz0issgmsnf6pccggx07d9r1z3"; depends=[progress R6]; }; + comparer = derive2 { name="comparer"; version="0.1.1"; sha256="1nmvqzrvyxdsidkr243qdn0lj2s7j3jv1sh0mdlxm2v5063nyryr"; depends=[progress]; }; comparison = derive2 { name="comparison"; version="1.0-4"; sha256="0pc462rhk8gr8zrf08ksi315kmhydlp027q5gd40ap5mmhk7rd82"; depends=[isotone]; }; compeir = derive2 { name="compeir"; version="1.0"; sha256="1bb5459wcqpjic2b9kjn0l0qdn7sqmmx34hdb2aqg80q22mhx5dv"; depends=[etm lattice]; }; compendiumdb = derive2 { name="compendiumdb"; version="1.0.3"; sha256="0glaqlzz5wr14yfhka1y7yw5ha6yc4waw61msbz0vkwj5z2hd2hk"; depends=[Biobase GEOquery RMySQL]; }; @@ -4987,7 +5095,7 @@ in with self; { complmrob = derive2 { name="complmrob"; version="0.6.1"; sha256="1dr80r1p05h3mlnjbgh6kfw86np8y2bhy9yi5qydv85w52k133n1"; depends=[boot ggplot2 robustbase scales]; }; compoisson = derive2 { name="compoisson"; version="0.3"; sha256="0v5dl7xydqi4p97nipn4hyhpq2gghmx81ygvl0vc8b65jhq89y0p"; depends=[MASS]; }; compositions = derive2 { name="compositions"; version="1.40-1"; sha256="1hn139g86bc1q3dj6kj9f21042v4x0xgrp4ni1zvx1zx8xmy3h8b"; depends=[bayesm energy robustbase tensorA]; }; - compound_Cox = derive2 { name="compound.Cox"; version="3.6"; sha256="162f8419624h3iys7q6djx28qmfizcmjznnn70cqllg1yr7amiq5"; depends=[numDeriv survival]; }; + compound_Cox = derive2 { name="compound.Cox"; version="3.7"; sha256="029r8v26ch8ps8d5pcg7y789sagsgm49xadwrcpjj87126hjh435"; depends=[numDeriv survival]; }; compute_es = derive2 { name="compute.es"; version="0.2-4"; sha256="1b5i8z66zbag0vdv98mmpwmizpm68vc3ajh0n3q94zdcmhcbx12d"; depends=[]; }; comtradr = derive2 { name="comtradr"; version="0.1.0"; sha256="0az61xsrwzr4g1s6g52vm9fivh985c6s06y3rb1c9ic0my385zhx"; depends=[httr jsonlite magrittr purrr]; }; concatenate = derive2 { name="concatenate"; version="1.0.0"; sha256="1kvsw7vwa3hn97ff7r6z21h5ajs74azwv2dk4pzgyaasnbp778hw"; depends=[]; }; @@ -5008,27 +5116,28 @@ in with self; { condvis = derive2 { name="condvis"; version="0.4-2"; sha256="0l515wpsmh7g4q4w29gb1gv5kafwzfhb8as0ml8vbbrh6xcgmz9q"; depends=[MASS]; }; coneproj = derive2 { name="coneproj"; version="1.12"; sha256="1937sf7b9s2y421gf2srjjdpv2knxrr03xyq5vg5j77z73kh9s6d"; depends=[Rcpp RcppArmadillo]; }; conf_design = derive2 { name="conf.design"; version="2.0.0"; sha256="06vdxljkjq1x56xkg041l271an1xv9wq79swxvzzk64dqqnmay51"; depends=[]; }; - confSAM = derive2 { name="confSAM"; version="0.1"; sha256="00l4hk0n63p3gdv6hpxqkkn3nw4rgw77rpwzn2k8fgq53ja44yfg"; depends=[]; }; + confSAM = derive2 { name="confSAM"; version="0.2"; sha256="1l67ndya07hh0yqfbabfhsvp3hryklx0022grpr0cb7ff88d1zam"; depends=[]; }; confidence = derive2 { name="confidence"; version="1.1-2"; sha256="0m6iz59n5jpi0ig3za3nir4d4bdsysf5g47d2nakfmaz03wk520z"; depends=[ggplot2 knitr markdown plyr xtable]; }; config = derive2 { name="config"; version="0.2"; sha256="1p0gaqrqhcrdkp5cr3rn4i5ny8mr96b3q1fwgs0i8lk5riljkk20"; depends=[yaml]; }; - configr = derive2 { name="configr"; version="0.3.1.1"; sha256="173apa7pmszpih589ka3jlmqygsphafw04s1azr10b9spb2b57bd"; depends=[glue ini jsonlite RcppTOML stringr yaml]; }; + configr = derive2 { name="configr"; version="0.3.2"; sha256="114gdxpy167dljfsnm52w62nvgsi0v8nghjfvrc1r7fgg148v5cr"; depends=[glue ini jsonlite RcppTOML stringr yaml]; }; confinterpret = derive2 { name="confinterpret"; version="1.0.0"; sha256="0qldaqpx7kpk71zfwv465jrscwzc9w3xfv52i4h01k9aw3q6m8ja"; depends=[]; }; conformal = derive2 { name="conformal"; version="0.2"; sha256="13d8yv8l333n3m8kl2sdnd0m5b7gjixkqjlpfj312fk9nxvqdbcg"; depends=[caret e1071 ggplot2 randomForest]; }; + conformalClassification = derive2 { name="conformalClassification"; version="1.0.0"; sha256="03v6xbgipb97byarqj0d38z9yb2g54mkkw343jxmi2j058z26yw7"; depends=[doParallel foreach mlbench randomForest]; }; confreq = derive2 { name="confreq"; version="1.5.1"; sha256="0gy6d1kffb1w86ifldswb9krxyc2p646g9yjlfm1h243qlp52sfa"; depends=[gmp]; }; congressbr = derive2 { name="congressbr"; version="0.1.1"; sha256="1kfpyrakbri9zqggcfy7flxyfpf85w5gqxi0p249qjw5khz8nkz5"; depends=[dplyr httr lubridate magrittr pscl purrr stringi stringr tibble tidyr xml2]; }; conicfit = derive2 { name="conicfit"; version="1.0.4"; sha256="1d704xgiyqmbwfxnsmhqg885x10q8yqxmrk4khqpg3lh696bw97d"; depends=[geigen pracma]; }; conics = derive2 { name="conics"; version="0.3"; sha256="06p6dj5dkkcy7hg1aa7spi9py45296dk0m6n8s2n3bzh3aal5nzq"; depends=[]; }; conjoint = derive2 { name="conjoint"; version="1.39"; sha256="0f8fwf419js9c292i3ac89rlrwxs2idhwxml1qd8xd2ggwfh6w5m"; depends=[AlgDesign clusterSim]; }; - connect3 = derive2 { name="connect3"; version="0.1.0"; sha256="07ih875ynrxzynj989d0h469ilq6c634z2z3igvxpkx40wr451d5"; depends=[]; }; conover_test = derive2 { name="conover.test"; version="1.1.5"; sha256="0f1p10klidk1xic1wd48j9rjh2fb3z6pfjx4y021lglx1w3av68k"; depends=[]; }; - constants = derive2 { name="constants"; version="0.0.1"; sha256="0vlfy80ww0xlkdrd493223rh4cq75pa7fmb57gkmzhclvfy9i608"; depends=[]; }; - constellation = derive2 { name="constellation"; version="0.0.1"; sha256="1807gc45b7wildsf2xihi85n6bfmiy4a1qfd3df8r9ykzkjnp4yr"; depends=[data_table fasttime]; }; + constants = derive2 { name="constants"; version="0.0.2"; sha256="1j9d52riwx7v1ppfdw0x517j7xh92qgskd4mj5yk9qa233brcwyy"; depends=[]; }; + constellation = derive2 { name="constellation"; version="0.1.0"; sha256="1q6kv8gg89xk80y24ma0zp8zy3cy4i93bjzax524cjbfnhpknx1k"; depends=[data_table fasttime]; }; constrainedKriging = derive2 { name="constrainedKriging"; version="0.2.4"; sha256="1a91s0b7yka37fb5pm172fmlqrhm6da370cqb9knvkg5n8vi4hys"; depends=[RandomFields rgeos sp spatialCovariance]; }; contfrac = derive2 { name="contfrac"; version="1.1-11"; sha256="0vmcazjlg0p3xaksai3k7yb9bbqkd4lhmbvxf2qymr2asqm51mdi"; depends=[]; }; - conting = derive2 { name="conting"; version="1.6"; sha256="0hyg1nj89i780mf1fgmrfiv5gl5nzlar8i1zy8fsim73cw9y39fm"; depends=[BMS coda gtools mvtnorm tseries]; }; + conting = derive2 { name="conting"; version="1.6.1"; sha256="0vw6gwiajxzaai6ky0b89l2jg4kd4c6xxzb1cmzxlcdrhwmhz402"; depends=[BMS coda gtools mvtnorm tseries]; }; contoureR = derive2 { name="contoureR"; version="1.0.5"; sha256="1izq1alkf24zd2sf2ir2adyrkwhdj7n89cv6z0dfh5mfqld5bkdn"; depends=[geometry plyr Rcpp reshape]; }; contrast = derive2 { name="contrast"; version="0.21"; sha256="1fgm6qm3svqg8ryq2kd1h9z6f3ni8kki7gl3izvjw6wir97ph8nw"; depends=[geepack Hmisc MASS nlme rms sandwich]; }; - controlTest = derive2 { name="controlTest"; version="1.0"; sha256="0gzhd92qy3dykwdfwckw6x46bd9m044hcn4bqwpv16af1xbrj963"; depends=[survival]; }; + control = derive2 { name="control"; version="0.2.5"; sha256="02s8h5kwpzfrivx3ign84gwlybkcs03ibawyxdny9zz5yhb7x3bs"; depends=[expm Matrix pracma signal]; }; + controlTest = derive2 { name="controlTest"; version="1.1.0"; sha256="19r8nvi35ldzgayifskjj706fv76hv6sj68yvggybp27rgyqbjfl"; depends=[survival]; }; convertGraph = derive2 { name="convertGraph"; version="0.1"; sha256="1jsrygj6ydzc0nzyzaq95j4blqavj7dqz182vgm1ckv8an3if0jx"; depends=[]; }; convertr = derive2 { name="convertr"; version="0.1"; sha256="1y9aq5in2qv1323amblmq3g22flpqvpkgkrw12kahg56mqf2b3iq"; depends=[DT miniUI rstudioapi shiny]; }; convevol = derive2 { name="convevol"; version="1.1"; sha256="1d9h2vjzfmnbm4aprbvhndgjh85zp3j1hssm9082nw7zb9ycxs1s"; depends=[ape cluster geiger MASS phytools]; }; @@ -5052,7 +5161,7 @@ in with self; { corclass = derive2 { name="corclass"; version="0.1.1"; sha256="0ai8si992f58mrvc8hq598zbw9d4jslnc96lpzj5d89lljjv3hf5"; depends=[igraph]; }; corcounts = derive2 { name="corcounts"; version="1.4"; sha256="0irlx62ql5rp5s7nnjdy6jh723wl4039wn10zxri8ihxwqsyyz3f"; depends=[]; }; cord = derive2 { name="cord"; version="0.1.1"; sha256="18xj6cwmx1a7p3vqx5img8qf8s75nc6pcv78v15j081pgn786ma5"; depends=[Rcpp RcppArmadillo]; }; - cordillera = derive2 { name="cordillera"; version="0.7-0"; sha256="0lapg9h2lw233h8plavs92c1l51m0sicslsr7gjyr0w3vkg13mxq"; depends=[dbscan yesno]; }; + cordillera = derive2 { name="cordillera"; version="0.8-0"; sha256="0cpysfivwmim36gcqn1i7450a33hv4pdbvil7syb0hr7vdm083dd"; depends=[dbscan yesno]; }; coreCT = derive2 { name="coreCT"; version="1.2.1"; sha256="19aq5snv5kin913rf0a1n9z0cg2l1jn2hnxbd0h05p1qrsysx52b"; depends=[igraph oro_dicom plyr raster]; }; coreNLP = derive2 { name="coreNLP"; version="0.4-2"; sha256="0rvyqj7s3lijq4rzil65060b29m393m7zmg99mykp1g1kby5bjd8"; depends=[rJava XML]; }; coreSim = derive2 { name="coreSim"; version="0.2.4"; sha256="1fhlss420rhs21l9i2ag5g3j0vnrkpqdh13ca4rwfan6h35qr3sm"; depends=[dplyr MASS]; }; @@ -5062,8 +5171,8 @@ in with self; { corlink = derive2 { name="corlink"; version="1.0.0"; sha256="06n9pcvbn8y9gy0mn9c0sw05424ss8smpaw3ly6a785cmj3d9b6m"; depends=[]; }; corpcor = derive2 { name="corpcor"; version="1.6.9"; sha256="1hi3i9d3841snppq1ks5pd8cliq1b4rm4dpsczmfqvwksg8snkrf"; depends=[]; }; corpora = derive2 { name="corpora"; version="0.4-3"; sha256="0zh8mabfy9yqgx7asi4yqv4c0kj59yvyxxaxjgdjy5kkr17zd4g4"; depends=[]; }; - corpus = derive2 { name="corpus"; version="0.9.4"; sha256="1dxkhrlbg72wv5q0b464109abmfwjx3s54hqajxsbqbwrnlpl8zj"; depends=[]; }; - corpustools = derive2 { name="corpustools"; version="0.3"; sha256="0z6f3k2zs12pwm011wmg9xk3b4322a87xm24d0pa266fqlrrhdm9"; depends=[data_table Matrix memoise plyr R6 Rcpp SnowballC stringi wordcloud]; }; + corpus = derive2 { name="corpus"; version="0.10.0"; sha256="0c984rsnbai2qrm2s10lkdfgx31m0ax46zhl74bns2bxfmagcn3l"; depends=[utf8]; }; + corpustools = derive2 { name="corpustools"; version="0.3.1"; sha256="0723n7gjk4yrnbvars6c6a805cqpx21z9yn9745wbvfgq7a8c4hy"; depends=[data_table Matrix memoise plyr R6 Rcpp SnowballC stringi wordcloud]; }; corr2D = derive2 { name="corr2D"; version="0.2.0"; sha256="02z9k0j6j8jyjfgff55amkzsa5w0xbr9nqm1247qylsh8sl2rqcz"; depends=[colorspace doParallel fields foreach mmand rgl]; }; correctedAUC = derive2 { name="correctedAUC"; version="0.0.3"; sha256="0c2kq7asq5mp48p8niqb84wnw4q2q2985wxbrywrhsszm9p3xspb"; depends=[ICC mnormt]; }; corregp = derive2 { name="corregp"; version="1.0.3"; sha256="07zsbxhvh7n4ma6lgsmg0kkmgcs5afa02k6cq57afaqvxisw18l3"; depends=[diagram ellipse gplots rgl]; }; @@ -5073,6 +5182,7 @@ in with self; { corrr = derive2 { name="corrr"; version="0.2.1"; sha256="1d04nk92fjmk4kc5zipjqjhhmb1w97kid7l2jz5a8pkwiccn5byc"; depends=[dplyr ggplot2 ggrepel lazyeval magrittr purrr seriation tibble tidyr]; }; corrsieve = derive2 { name="corrsieve"; version="1.6-8"; sha256="0ak3j9khcwv5rxbicck2sr260wpmd3xj254y7pdavx2fk0b72yxs"; depends=[]; }; corset = derive2 { name="corset"; version="0.1-4"; sha256="0ladyqvkys4cldvbhkii9jwn1k5p1ym2g5bgdlz1hq1sv30ixn2f"; depends=[]; }; + cosa = derive2 { name="cosa"; version="1.0.0"; sha256="1hrqjz3wvq1i1j69n8gpxfm8rzxqwwkfr4gwby5qcnlnq0ip2by8"; depends=[nloptr]; }; cosinor = derive2 { name="cosinor"; version="1.1"; sha256="02nnqg51vq48lzk667cyarnmhcf5mifnsdij7dlgqvz2k4fdq4pl"; depends=[ggplot2 shiny]; }; cosinor2 = derive2 { name="cosinor2"; version="0.1.0"; sha256="0pxkkp8dxhzqp2v3pfzigh1ka7ardf168k5p41z289xgar9p33g0"; depends=[cosinor ggplot2 Hmisc matrixStats]; }; cosmoFns = derive2 { name="cosmoFns"; version="1.0-1"; sha256="0a6xhbgxxnymlvicg99yhgny2lscxcbmvqmy17kxmahdi797dsg6"; depends=[]; }; @@ -5080,7 +5190,7 @@ in with self; { costat = derive2 { name="costat"; version="2.3"; sha256="1kqyl89lx1amap9zgrfy1bqnl93kahrksj6yms44yrxr1as2g4nk"; depends=[wavethresh]; }; cotrend = derive2 { name="cotrend"; version="1.0"; sha256="0h0y502wqq83wlf9ab1b9rxg1wycvi3sp4lbqfpvy46vgljrjw87"; depends=[xts]; }; couchDB = derive2 { name="couchDB"; version="1.4.1"; sha256="1n99amvnsjp88y091603hjsvp243c5i6dbrsvdjfmzgj5dsrv70m"; depends=[bitops httr RCurl rjson]; }; - countrycode = derive2 { name="countrycode"; version="0.19"; sha256="0cgv8sds01figs5dsm1gga2py2nzf3a3xrlkmblal52xxpng2jf8"; depends=[]; }; + countrycode = derive2 { name="countrycode"; version="1.00.0"; sha256="1b2ijbf74bxvi01f53lbb2b9jya2rlyazvzacxpj79y1dbs600s6"; depends=[]; }; countyfloods = derive2 { name="countyfloods"; version="0.1.0"; sha256="0ld8p8dfk9khvwffbn8sad0j3an25s7cvbi6jxljgx4zc6ldh699"; depends=[dataRetrieval dplyr ggplot2 lubridate maps plyr R_utils tidyr]; }; countytimezones = derive2 { name="countytimezones"; version="1.0.0"; sha256="0sk22fmz9d3wvlfvjl1xdavvl04q1ywy8ww2gi5am3yiizkf0v9w"; depends=[dplyr lubridate]; }; countyweather = derive2 { name="countyweather"; version="0.1.0"; sha256="0q56bnh9x6jyj1sdd1q4yv2n774mbv268pgp285bjybgqm2pyisz"; depends=[dplyr geosphere ggmap ggplot2 lubridate purrr raster rnoaa sp stringi tibble tidyr tigris]; }; @@ -5088,9 +5198,9 @@ in with self; { covLCA = derive2 { name="covLCA"; version="1.0"; sha256="15jsjrlaws1cqyrwvh4lzbhxkb11jmgpmddg98nfrzmjpczn2iw3"; depends=[Matrix mlogit poLCA]; }; covRobust = derive2 { name="covRobust"; version="1.1-3"; sha256="0zcfala4l0j4w0sx5hlw40vxiypans3d7pgkxy25nj0d2m1jkvba"; depends=[]; }; covTest = derive2 { name="covTest"; version="1.02"; sha256="0p4di8bdjghsq5jd678dprlhiwnxr5piqlx2z7hi2bjjpvvl5657"; depends=[glmnet glmpath lars MASS]; }; - covTestR = derive2 { name="covTestR"; version="0.1.1"; sha256="06zbl03zcfcm85hb30jz7xv3gq2kmpsmgvz7lvwrlpflw63l3g28"; depends=[dplyr lazyeval Rcpp RcppArmadillo]; }; + covTestR = derive2 { name="covTestR"; version="0.1.3"; sha256="13sjnc3yrh2hzdcnnh6sfzl8gqilarg79n0sjr8vqyvclmz686k0"; depends=[dplyr lazyeval Rcpp RcppArmadillo]; }; covafillr = derive2 { name="covafillr"; version="0.4.2"; sha256="00790rgpdxxwc48cw0w5savvmvi8ljmyrh6w3f8qzx6pq1s982gm"; depends=[ggplot2 RcppEigen]; }; - covatest = derive2 { name="covatest"; version="0.3.0"; sha256="1wq3rmdvd9k70zs3zwdr5hz2f63qa3bdfk3pw02v85w6nnjn6v64"; depends=[gstat matrixcalc sp spacetime]; }; + covatest = derive2 { name="covatest"; version="1.0.0"; sha256="0g4wfwxngvcssi2bmmb2q5fv909z9qm4wfc8gcldz7fckbsc0k10"; depends=[gstat matrixcalc sp spacetime]; }; covequal = derive2 { name="covequal"; version="0.1.0"; sha256="1qj6djqf1rnjmnaz1nryj9dc104082w258dzjjp5q18gg1ck8v0c"; depends=[corpcor RMTstat]; }; covfefe = derive2 { name="covfefe"; version="0.1.0"; sha256="178qc77y4bn04qad3g70wr8y4v0ggyg807w67m8wvhbcxqr8yq7c"; depends=[tokenizers]; }; covmat = derive2 { name="covmat"; version="1.0"; sha256="00y966897x83v471yarfikpr794b7adhgn5c9hgh0j1j4yfdc3b8"; depends=[DEoptim doParallel fGarch foreach ggplot2 gridExtra lhs Matrix mvtnorm optimx reshape2 RMTstat robust robustbase scales VIM xts zoo]; }; @@ -5098,10 +5208,10 @@ in with self; { covreg = derive2 { name="covreg"; version="1.0"; sha256="0v19yhknklmgl58zhvg4szznb374cdh65i7s8pcj2nwrarycwzaq"; depends=[]; }; covsep = derive2 { name="covsep"; version="1.0.0"; sha256="1i6ygzzf2s0f7a42q2pb1v0gn369wxdyxvbk4k891irq352sf18r"; depends=[mvtnorm]; }; cowbell = derive2 { name="cowbell"; version="0.1.0"; sha256="1zz0g30zvqfk5lh09y90iq3s7x2wwbs852i3d56mfp926gxdxc2y"; depends=[ggplot2 misc3d rgl]; }; - cowplot = derive2 { name="cowplot"; version="0.9.1"; sha256="0iq0wsi7467cj8hqml06whk3xsiv89x8dvm9ynwp411pzzbdjgwm"; depends=[ggplot2 gtable plyr scales]; }; + cowplot = derive2 { name="cowplot"; version="0.9.2"; sha256="13yjw7yv7imyqiawqqp304hkp6x36iv6rf6gn03dwzwkj9zwx4lb"; depends=[ggplot2 gtable plyr scales]; }; cowsay = derive2 { name="cowsay"; version="0.5.0"; sha256="16rlpyfiwk2f04p49inf5m3pb5nvb45xs6sdfjszihm1hxl09x7x"; depends=[fortunes rmsfact]; }; coxinterval = derive2 { name="coxinterval"; version="1.2"; sha256="0vb7vmzbb2dsihx04jbp2yvzcr033g435mywmwimqhfqdrmjx3fi"; depends=[Matrix survival timereg]; }; - coxme = derive2 { name="coxme"; version="2.2-5"; sha256="0lpdwpvsgjgmbf55qqhflw4q40xmqm422inkssgn3ladcp68gb1s"; depends=[bdsmatrix Matrix nlme survival]; }; + coxme = derive2 { name="coxme"; version="2.2-7"; sha256="0jbaw055whbbxwx6y0gggj5i9rlr787nyknwgqdf1dnzrfzm69v7"; depends=[bdsmatrix Matrix nlme survival]; }; coxphMIC = derive2 { name="coxphMIC"; version="0.1.0"; sha256="0lmma5wzcczr762xqa4yamvwvyviqxk8gdrps3sydg3n14hckp6d"; depends=[numDeriv survival]; }; coxphSGD = derive2 { name="coxphSGD"; version="0.2.1"; sha256="17ga33v7a89dsygk5yypkz03x7dvjhibnwlvwfvgb2p7djd8w465"; depends=[survival]; }; coxphf = derive2 { name="coxphf"; version="1.12"; sha256="0vsdpbpc18fm6dwiqjwclgimwng34xqzy2mqbcijs6p7h1j124a0"; depends=[survival]; }; @@ -5125,7 +5235,6 @@ in with self; { cr17 = derive2 { name="cr17"; version="0.1.0"; sha256="1zyq77gxycbwyqhv5w0zw4n7v3ipjs6rcbja43g0k5q8h0gjnnn1"; depends=[cmprsk dplyr ggplot2 gridExtra gtable scales survival]; }; crackR = derive2 { name="crackR"; version="0.3-9"; sha256="18fr3d6ywcvmdbisqbrbqsr92v33paigxfbslcxf7pk26nzn2lly"; depends=[evd Hmisc]; }; cramer = derive2 { name="cramer"; version="0.9-1"; sha256="1dlapmqizff911v3jv8064ddg8viw28nq05hs77y5p4pi36gpyw4"; depends=[boot]; }; - crandatapkgs = derive2 { name="crandatapkgs"; version="0.1.8"; sha256="12sz54csqnwk49iwg5zcigyczxhgskxsak6ws2ih7nqpv19v8a0m"; depends=[]; }; crank = derive2 { name="crank"; version="1.1"; sha256="117sgq7zm5wxmd97sfc927qq70snra6vd090mhpcsdhipw1py6zc"; depends=[]; }; cranlike = derive2 { name="cranlike"; version="1.0.1"; sha256="0lnbdkyk5mdy0qlvkx2hakqrisrxsdp5r3gif6f46pf4d9cpfj8v"; depends=[DBI debugme desc RSQLite]; }; cranlogs = derive2 { name="cranlogs"; version="2.1.0"; sha256="1w1nbifjb9l106fk97zy0w73x73bw5azq89l3c1b8r2fz8aljkkc"; depends=[httr jsonlite]; }; @@ -5133,19 +5242,19 @@ in with self; { crawl = derive2 { name="crawl"; version="2.1.1"; sha256="0dr9z8y8rvc3wn1gjb6mh5wmszng9j1r2a9ks6p5am8ghf754sps"; depends=[dplyr gdistance mvtnorm raster Rcpp RcppArmadillo shiny sp]; }; crayon = derive2 { name="crayon"; version="1.3.4"; sha256="0s7s6vc3ww8pzanpjisym4jjvwcc5pi2qg8srx7jqlz9j3wrnvpw"; depends=[]; }; crblocks = derive2 { name="crblocks"; version="0.9-1"; sha256="1m6yy6jb1dld7m9jaasms5ps8sn3v039jvlk8b0c08hmm7y0rm3z"; depends=[]; }; - crch = derive2 { name="crch"; version="1.0-0"; sha256="1wd9hwr68qlinaw23lckjizq5g67v74wc3v6ig1rxrxyssyzag68"; depends=[Formula ordinal]; }; + crch = derive2 { name="crch"; version="1.0-1"; sha256="0h97vr9sy7hncjxv5v3y79pw2qqzpx6z6nqgx6k2ics1lf9misyb"; depends=[Formula ordinal sandwich scoringRules]; }; creditr = derive2 { name="creditr"; version="0.6.1"; sha256="1dhjl99gjc97bdsdg29mq6xifivjn9kr0y7m2jzvrzb26x856z97"; depends=[devtools quantmod Rcpp RCurl XML xts zoo]; }; credsubs = derive2 { name="credsubs"; version="1.0"; sha256="12bs1whk23y41hxa976j30d31x81rmxapz9ll5y2hi5c1h4fypn4"; depends=[]; }; credule = derive2 { name="credule"; version="0.1.3"; sha256="1vciqkxkf93z067plipvhbks9k9sfqink5rhifzbnwc2c5gxp5mx"; depends=[]; }; cricketr = derive2 { name="cricketr"; version="0.0.14"; sha256="0vziyagx594d0k44c53z720vwb1hflcxb7m898l5vfds8jsi6mhv"; depends=[dplyr forecast ggplot2 lubridate plotrix scatterplot3d XML]; }; - crimCV = derive2 { name="crimCV"; version="0.9.3"; sha256="1p2cma78fb9a2ckmwdvpb6fc0818xw2mvq565dgiimgkdmmr0iid"; depends=[]; }; + crimCV = derive2 { name="crimCV"; version="0.9.6"; sha256="14ckk88i7jk8a7kl51d7qfdis44jng6zz9zd72cdp80a57dvrvzq"; depends=[]; }; crimelinkage = derive2 { name="crimelinkage"; version="0.0.4"; sha256="1zzk50kyccvnp51vzp28c9yi23hsp25arrgdn88lwfwa0m43rlar"; depends=[geosphere igraph]; }; crisp = derive2 { name="crisp"; version="1.0.0"; sha256="1gs8jnd9y9pd55w6kwv9mvmg3wd8hjiw3lwx7k242pxccsxklfxq"; depends=[MASS Matrix]; }; - crmPack = derive2 { name="crmPack"; version="0.2.1"; sha256="0n6731b5l4vsyk8r35jgvrmmb7sjrlxfcybhrvbpd9m0w5aqi3dz"; depends=[BayesLogit GenSA ggplot2 gridExtra MASS mvtnorm rjags]; }; + crmPack = derive2 { name="crmPack"; version="0.2.6"; sha256="0jpf0626nkl3inbgb8hcgkhilrd1bkxjhm3jzscxrdghpzwvzw6h"; depends=[GenSA ggplot2 gridExtra MASS mvtnorm rjags]; }; crminer = derive2 { name="crminer"; version="0.1.4"; sha256="1vnl01q5sw13g6qhvn61w9i40zpg9cszisgi0h8d6q6rr23iws9w"; depends=[crul hoardr jsonlite pdftools xml2]; }; crmn = derive2 { name="crmn"; version="0.0.20"; sha256="1kl1k1s2gm63f9768cg8w4j6y1gq4hws3i7hdfhj7k9015s0a25p"; depends=[Biobase pcaMethods]; }; crn = derive2 { name="crn"; version="1.1"; sha256="1fw0cwx478bs6hxidisykz444jj5g136zld1i8cv859lf44fvx2d"; depends=[chron RCurl]; }; - crochet = derive2 { name="crochet"; version="1.0.0"; sha256="1r10lr60v5fqppbqgp994hcx3ybg3yqc0x983pi8frdhj9mqmzrz"; depends=[]; }; + crochet = derive2 { name="crochet"; version="2.0.1"; sha256="1il29hnnx3kwjvsnirvm5vxdd04x94qn4526411cw0syyqqlbnp8"; depends=[]; }; cronR = derive2 { name="cronR"; version="0.3.0"; sha256="0nyjgxgvasqv8g9cvkzii0jsr15x5i76waz5hzzsjar5mwq6vq8h"; depends=[digest]; }; crop = derive2 { name="crop"; version="0.0-2"; sha256="1yjpk7584wrz9hjqs21irjnrlnahjg8lajra9yfdp6r927iimg1l"; depends=[]; }; cropdatape = derive2 { name="cropdatape"; version="1.0.0"; sha256="19bn0apx4p8hnz388zg7sq59qv89vv8k5php317kcv7ai2k2gh34"; depends=[]; }; @@ -5155,20 +5264,22 @@ in with self; { crosstalk = derive2 { name="crosstalk"; version="1.0.0"; sha256="0lfa89vhrzi7a1rghmygcjr8gzddw35sinb3jx6g49mc9jias7mk"; depends=[ggplot2 htmltools jsonlite lazyeval R6 shiny]; }; crossval = derive2 { name="crossval"; version="1.0.3"; sha256="0acpcisg6pkxblyc4j9hiri58h1rn7ay43p5ib5ia8a4a8bnfa4p"; depends=[]; }; crosswalkr = derive2 { name="crosswalkr"; version="0.1.1"; sha256="0yk5yxxsd1alfbfjg5bzjc5b07jfj5s551bzrv3dg57hxnqw9b2z"; depends=[dplyr haven labelled readr readxl tibble]; }; + crossword_r = derive2 { name="crossword.r"; version="0.3.5"; sha256="1h6r5rrmla3jsdfnkxsv4drvp3nrkqkygqv9ak0pn37zlbms99z9"; depends=[dplyr jsonlite magrittr R6 r6extended stringr]; }; crp_CSFP = derive2 { name="crp.CSFP"; version="2.0.2"; sha256="0gazmhf5bv994x441m2xm0w18h9lw3y68qzdf6gmyqimj4wjqjgf"; depends=[MASS]; }; crplyr = derive2 { name="crplyr"; version="0.1.4"; sha256="1z50hplp6m4zgjfhmf2j8b22np6kjzqnprrdc0qx8408cb9vc9zr"; depends=[crunch dplyr lazyeval tibble]; }; crqa = derive2 { name="crqa"; version="1.0.6"; sha256="1v9fwl98jjlg2z5skqsjmmgpmmxy4g1gzvc28yflvdp50qn509v8"; depends=[fields Matrix plot3D pracma tseriesChaos]; }; crrSC = derive2 { name="crrSC"; version="1.1"; sha256="171cw56q2yv1vb4qd0va75i2q89jcw1126q8pcbv0235g7p2a86z"; depends=[survival]; }; crrp = derive2 { name="crrp"; version="1.0"; sha256="1fq54jr6avrli91a4z1hp5img4kghyw1yvjr5xyccsanf9i35x8r"; depends=[cmprsk Matrix survival]; }; crrstep = derive2 { name="crrstep"; version="2015-2.1"; sha256="03vd97prws9gxc7iv3jfzffvlrzhjh0g6kyvclrf87gdnwifyn1z"; depends=[cmprsk]; }; - crs = derive2 { name="crs"; version="0.15-29"; sha256="1vqwshyzigcixbmcksvs74pij8zc62vdn9wj86s4zi2qhc58xys2"; depends=[boot np quantreg rgl]; }; + crs = derive2 { name="crs"; version="0.15-30"; sha256="1mv5rf8xfgqlqnvmgsj0zdpwlddzv4d0ymsjl00g21zjq4805g09"; depends=[boot np quantreg rgl]; }; crskdiag = derive2 { name="crskdiag"; version="1.0.1"; sha256="0100wbyvchx6jwlrwc6rwhdjanips5c0f5zqzs2c0dgwygpqw30w"; depends=[cmprsk]; }; crsnls = derive2 { name="crsnls"; version="0.2"; sha256="0rv0xrdl9ix6bhaf554gma8zf923w47f8j1dkbs8g6xjqjr1c40a"; depends=[]; }; crtests = derive2 { name="crtests"; version="0.2.1"; sha256="0z8idz37dgwvi1q2vryldii7fn9yxd32gds77ml76jfplxbkikpd"; depends=[caret plyr stringr]; }; - crul = derive2 { name="crul"; version="0.4.0"; sha256="0y317a3nr4cilvxg9lsibaqqb5wmz70x2kyna3hkw6hp18wavn0m"; depends=[curl httpcode mime R6 urltools]; }; - crunch = derive2 { name="crunch"; version="1.19.0"; sha256="1zld0hbjdmf446kjbjkpnmc0x35807ficc89g97qgpbw9nihn4b7"; depends=[curl httpcache httr jsonlite]; }; + crul = derive2 { name="crul"; version="0.5.0"; sha256="096jwl1674h1vi0plmqjy9k8w0fqnqhkig3kxf3cc4g7kz3ih5j7"; depends=[curl httpcode mime R6 urltools]; }; + crunch = derive2 { name="crunch"; version="1.20.0"; sha256="1hsya10ba6mb3xd1lvbn2d74g9glm0l98fbh130phq5wdnn8lpx9"; depends=[crayon curl httpcache httr jsonlite]; }; crunchy = derive2 { name="crunchy"; version="0.2.0"; sha256="1q9mqpkg5ljb798922fmvjjp36kyjr1rrm6jf3s2fwjrhq186y3z"; depends=[crunch shiny]; }; cruts = derive2 { name="cruts"; version="0.3"; sha256="0yn6xc2wg23nkjnsb7kii7dn897wf4ymnpmgppacrsznl8mmlmgd"; depends=[lubridate ncdf4 raster sp stringr]; }; + crypto = derive2 { name="crypto"; version="0.1.3"; sha256="0q5q2rx49185ckwr5czr4ia9j9060d1j6mz4bdvz3sl86qnllgsp"; depends=[curl doSNOW dplyr foreach jsonlite lubridate magrittr rvest xml2]; }; cryst = derive2 { name="cryst"; version="0.1.0"; sha256="04da19dy3mkngd3ma44cd8cdkb5acjy9lbhfipa9flp339j1pp57"; depends=[flux pracma]; }; csSAM = derive2 { name="csSAM"; version="1.2.4"; sha256="1ms8w4v5m9cxs9amqyljc2hr1178cz6pbhmv7iiq9yj1ijnl4r1x"; depends=[]; }; csabounds = derive2 { name="csabounds"; version="1.0.0"; sha256="15l7i15w5jk4h3148dlk8v2i4awns5vxvv6m59qcv0hzns6jhx9j"; depends=[BMisc ggplot2 pbapply progress qte]; }; @@ -5180,7 +5291,7 @@ in with self; { cssTools = derive2 { name="cssTools"; version="1.0"; sha256="1p8c21c1hilmd9ibqyz493fy1x95hb2pidybsyicch53gkb542br"; depends=[sna]; }; cstab = derive2 { name="cstab"; version="0.2-1"; sha256="08s1vann21k4afq84cp3gjzn2z0hqr7mb2znag0qyd9lzh3z6jd2"; depends=[cluster fastcluster Rcpp]; }; cstar = derive2 { name="cstar"; version="1.0"; sha256="1zws4cq5d37hqdxdk86g85p2wwihbqnkdsg48vx66sgffsf1fgxd"; depends=[]; }; - csv = derive2 { name="csv"; version="0.5"; sha256="1bpxbms54xigfz1z9jalcv5g61f74591ndcdpqrh53bgq6n0l7vv"; depends=[]; }; + csv = derive2 { name="csv"; version="0.5.2"; sha256="1gwib79fysmiwaw48ghsygyqgc00j5zwy7lfgcziw1kp6nxkdk19"; depends=[]; }; csvread = derive2 { name="csvread"; version="1.2"; sha256="1zx43g4f4kr7jcmiplzjqk2nw1g5kmmfap85wk88phf6fp0w8l5p"; depends=[]; }; csvy = derive2 { name="csvy"; version="0.1.3"; sha256="0vszbxqa88sdsi73wng4y8zxhrvcksqa6qs3rbh50c2nll8r8kb3"; depends=[yaml]; }; cthreshER = derive2 { name="cthreshER"; version="1.1.0"; sha256="18b66d08dq8pvnixmm4ir4r800b37z5yillaa88l317mdilbci9s"; depends=[Matrix]; }; @@ -5192,16 +5303,17 @@ in with self; { ctqr = derive2 { name="ctqr"; version="1.0"; sha256="1q4icv8qicgwr664cbrmkh2x9xmlrc80yvz8gnaqh86248kn4yp3"; depends=[pch survival]; }; cts = derive2 { name="cts"; version="1.0-21"; sha256="0wagxqb8msjc8z33qp7sc92l53f56d9bzz9160bmgpjxlj6cnqcj"; depends=[]; }; ctsem = derive2 { name="ctsem"; version="2.5.0"; sha256="15k2f9x436n78k63izgg31083spwh4r42s843h69kpvz25717m6p"; depends=[Matrix OpenMx plyr Rcpp rstan shiny]; }; - ctv = derive2 { name="ctv"; version="0.8-3"; sha256="1bq35yzgapdmc8l064ghcq4rvdk3mw7sccrrig5achsxy6k7gwqn"; depends=[]; }; + ctv = derive2 { name="ctv"; version="0.8-4"; sha256="0yl20b1j8c11b1g0q6qv0wsaivxpikwslhky4lckbm3rwbn5vbb2"; depends=[]; }; cubature = derive2 { name="cubature"; version="1.3-11"; sha256="06f6gsvbb732p80r6hxvzh4ik546icxfvx21dyh65ypmw3kgm64k"; depends=[Rcpp]; }; cubfits = derive2 { name="cubfits"; version="0.1-3"; sha256="0i2iybm9vpyqnahzka66yms1namdd36bz1i1yjy74qsc1h995rga"; depends=[coda foreach]; }; + cubing = derive2 { name="cubing"; version="1.0-1"; sha256="00vqhh2kif9phwxs26xnizsy6mhdaaa97wyizw80g9wyh9c2r7n9"; depends=[rgl]; }; cudaBayesreg = derive2 { name="cudaBayesreg"; version="0.3-16"; sha256="1xsamdsg4cq7l5r7czkg70j5gypf1dak3h353xfbz3rq0r0dni19"; depends=[cudaBayesregData oro_nifti]; }; cudaBayesregData = derive2 { name="cudaBayesregData"; version="0.3-11"; sha256="1cls9xqgps7icjpi1mllkrksdxwc1jfhxgffvrcrqx2l16vw6qfx"; depends=[]; }; cudia = derive2 { name="cudia"; version="0.1"; sha256="1ms3bc8sp6l3bm75j418mmb707sy3gyvxznhfias3nd4sw7i074x"; depends=[MCMCpack mvtnorm]; }; cumSeg = derive2 { name="cumSeg"; version="1.1"; sha256="01hn3j1i7bi2r9vsqwbgy1f1alcisxyf4316xx57bg82lb34d0s5"; depends=[lars]; }; cumplyr = derive2 { name="cumplyr"; version="0.1-1"; sha256="07sz1wryl3kxbk67qyvnkrkdrp4virlsaia0y6rf9bqdw7rc6vi2"; depends=[]; }; cumstats = derive2 { name="cumstats"; version="1.0"; sha256="119w751z9dg6pjyk389pbl8ab8pirf9sqndi4nxi89ix2bby4xz8"; depends=[]; }; - curl = derive2 { name="curl"; version="3.0"; sha256="01m52jz2q38yc32xbnmpm48hck2xj9fyhxq262p04y67gjpf7y3v"; depends=[]; }; + curl = derive2 { name="curl"; version="3.1"; sha256="15fbjya2xrf2k9hhvg3frisrram4yk5wlfz67zj1z8ahpsb2a3r7"; depends=[]; }; currentSurvival = derive2 { name="currentSurvival"; version="1.0"; sha256="0bqpfwf4v4pb024a98qwg81m6zd7ljg1ps42ifhxpqx7b9gdyi6c"; depends=[cmprsk survival]; }; curry = derive2 { name="curry"; version="0.1.1"; sha256="1ps9hvbnb02m0b8hlw4admwbziyjvswj08ldi2dk3ymnrpawcc29"; depends=[]; }; curstatCI = derive2 { name="curstatCI"; version="0.1.1"; sha256="0igqdv0fzzji10gz3j3ir8qxpy7vdjfl137067rc28qzbrl2sy2c"; depends=[Rcpp]; }; @@ -5214,9 +5326,7 @@ in with self; { cuttlefish_model = derive2 { name="cuttlefish.model"; version="1.0"; sha256="1rmkfyfd1323g2ymd5gi1aksp160cwy5ha5cjqh5r6fzd8hhqjxs"; depends=[]; }; cvAUC = derive2 { name="cvAUC"; version="1.1.0"; sha256="13bk97l5nn97h85iz93zxazhr63n21nwyrpnl856as9qp59yvn64"; depends=[data_table ROCR]; }; cvTools = derive2 { name="cvTools"; version="0.3.2"; sha256="0b7xb6dmhqbvz32zyfbdvm9zjyc59snic6wp1r21ina48hchn3sj"; depends=[lattice robustbase]; }; - cvcrand = derive2 { name="cvcrand"; version="0.0.1"; sha256="1g2yblkfzkr0b2qqiip1jkarikczrsmb32z1n1hhgshvd3jdh3y4"; depends=[tableone]; }; cvequality = derive2 { name="cvequality"; version="0.1.1"; sha256="0pqvaz8vfwd0x433rrdwdwjp3hgsw1nb5nzsxci5zibjksk14kgp"; depends=[]; }; - cvplogistic = derive2 { name="cvplogistic"; version="3.1-0"; sha256="1lm66nn0q7665r64rdslxp35b7drdss4mys42ks54xdydcminns9"; depends=[]; }; cvq2 = derive2 { name="cvq2"; version="1.2.0"; sha256="19k95xg2y3wd4mx3wvbrc1invybd446g13vsp3dv05nw2kx4f6w8"; depends=[]; }; cvxbiclustr = derive2 { name="cvxbiclustr"; version="0.0.1"; sha256="00k75zy8v6qd5fg0h258i5z8ljjkfgkxz45cspysl1ap89d5n7df"; depends=[igraph Matrix]; }; cvxclustr = derive2 { name="cvxclustr"; version="1.1.1"; sha256="0idmx4wgz4d0b1xzmlq5bsk2f2q38lpf9c117hg97xsfndzn7vqj"; depends=[igraph Matrix]; }; @@ -5234,40 +5344,39 @@ in with self; { cytominer = derive2 { name="cytominer"; version="0.1.0"; sha256="1p988aw689kgpbglmzrnl30krnbynwk3dgjv7w3x2719hi481z2j"; depends=[caret doParallel dplyr foreach futile_logger magrittr purrr rlang tibble tidyr]; }; d3Network = derive2 { name="d3Network"; version="0.5.2.1"; sha256="1gh979z9wksyxxxdzlfzibn0ysvf6h1ij7vwpd55fvbwr308syaw"; depends=[plyr rjson whisker]; }; d3Tree = derive2 { name="d3Tree"; version="0.2.0"; sha256="0xjr36hdd00dy8s8z1a1s44dn2wg0nm6yqc1rri2l0dqrbh4nrbn"; depends=[dplyr htmlwidgets magrittr plyr stringr]; }; - d3heatmap = derive2 { name="d3heatmap"; version="0.6.1.1"; sha256="0xx1lpp9qpkqh991ib0l9z1wn6j67jnggrhq5gr5sm63m7sjijwn"; depends=[base64enc dendextend htmlwidgets png scales]; }; + d3heatmap = derive2 { name="d3heatmap"; version="0.6.1.2"; sha256="1ici8j0wzzklhmw94qlxm292qs562vc32wq8mnjsas2n1p35vkmk"; depends=[base64enc dendextend htmlwidgets png scales]; }; d3plus = derive2 { name="d3plus"; version="0.1.0"; sha256="0kadz83pals03n0v3zqhmhf6visigk52yn58xckhb57fid4xzj5w"; depends=[htmlwidgets magrittr]; }; d3r = derive2 { name="d3r"; version="0.7.1"; sha256="1v25jh4gfp921q5cgjzxyar1sx2q842slkkshq1lnb31zkzidygq"; depends=[dplyr htmltools tidyr]; }; dChipIO = derive2 { name="dChipIO"; version="0.1.5"; sha256="1xrafw5h071d8rfqaic3gifc80jpiddjz5x6l2cr8kgjvph60gqh"; depends=[]; }; dCovTS = derive2 { name="dCovTS"; version="1.1"; sha256="1pd50nfmfcqpi8zj20ngl0hc23qa4rabqhc1xci3ivyhs0valhsl"; depends=[doParallel energy foreach]; }; dGAselID = derive2 { name="dGAselID"; version="1.2"; sha256="0da7fi872i3ycb3j5v4isr4x2z39a68w4mdq859zslmqhiqd43b6"; depends=[ALL Biobase genefilter MLInterfaces]; }; dHSIC = derive2 { name="dHSIC"; version="2.0"; sha256="1acbzln2rlyranccsjndpw6pj4a2lyb24jb52r2wms8lsg4fn2m9"; depends=[Rcpp]; }; - dLagM = derive2 { name="dLagM"; version="0.1.0"; sha256="02923n5m5fpjr0vcbszbhxpr1xrywbb6bvqlih9yg5vngkryram5"; depends=[AER dynlm Hmisc wavethresh]; }; + dLagM = derive2 { name="dLagM"; version="1.0.2"; sha256="0wl1sivphm6plmvjixxs90ki8a1pi4nb2vxqdm5xxbi0ljwpgl1x"; depends=[AER dynlm formula_tools Hmisc plyr wavethresh]; }; dMod = derive2 { name="dMod"; version="0.4"; sha256="12q80pk0j5081qz4rb19iib0n4h1yf1c42iq1z14yyrmki3266pm"; depends=[cOde deSolve ggplot2 plyr rootSolve stringr]; }; dSVA = derive2 { name="dSVA"; version="1.0"; sha256="0vy0flyg82x0n9vw6jf9f76qy84sp0wnis91faj37ac5hdv3pvsb"; depends=[sva]; }; - dad = derive2 { name="dad"; version="3.0.1"; sha256="0h8nj8nsmhyv1xww3x0z2fgnh1cd1jyszd91i79wba465vbsi4mh"; depends=[e1071 lattice]; }; - dae = derive2 { name="dae"; version="3.0-04"; sha256="1fykmdgg29smdm8qn2cfspjh8lspa57h4s0jsdfz8gh5zfmvsn1h"; depends=[ggplot2]; }; + dad = derive2 { name="dad"; version="3.1.0"; sha256="1vwwcrawci8v5rz3al2647gypk0bpngvngkb5s6zxhrdvk785m9a"; depends=[e1071 lattice]; }; + dae = derive2 { name="dae"; version="3.0-12"; sha256="0xp6cyyk4s06igh2jvrdr28n0bhma79c4cfqxx9mihfx9hcw4bh9"; depends=[ggplot2]; }; daewr = derive2 { name="daewr"; version="1.1-7"; sha256="01n9g3adjk66wx9lm9gl6wa3y9ba5w0w0p5ayj8rx5ywxnm8fnvi"; depends=[BsMD FrF2 lattice]; }; daff = derive2 { name="daff"; version="0.3.0"; sha256="1kl5pjwxds6bz58zd5xaa1hknd6f9i0512895fhljqi7kvsrldra"; depends=[jsonlite V8]; }; dafs = derive2 { name="dafs"; version="1.0-37"; sha256="1vdi57qaqdn39yf1ih2gzry02l289q4bffpksglsl4shs6bg2206"; depends=[s20x]; }; dagR = derive2 { name="dagR"; version="1.1.3"; sha256="13jyhwjvvrjjja18rqzfdcw9ck90qm5yjwd25nygxgdf1894y03b"; depends=[]; }; - dagbag = derive2 { name="dagbag"; version="1.1"; sha256="1hpg7fs1yhnycziahscymkr0s3a2lyasfpj0cg677va73nrpdz12"; depends=[]; }; dagitty = derive2 { name="dagitty"; version="0.2-2"; sha256="11jpjr2l89glr9962mbhy4dfbdjs80nf603w90xx16s4qcmcsghc"; depends=[boot jsonlite MASS V8]; }; + dalmatian = derive2 { name="dalmatian"; version="0.3.0"; sha256="06j7ampp0hwjqgw2agplfc8mngxnb6g4yv3l08plg35769jxxz7f"; depends=[coda dglm gdata ggmcmc rjags]; }; dam = derive2 { name="dam"; version="0.0.1"; sha256="1b0fi3l8jxgpr9fwvi03giq7wm39msbh0c82ffgkh54a3bbf5blc"; depends=[]; }; dams = derive2 { name="dams"; version="0.2"; sha256="0hf5s8i61r5q4h3s8dfmdl3vkj7v15ha59pjvpjqx3yihsgziqz9"; depends=[RCurl]; }; - darch = derive2 { name="darch"; version="0.12.0"; sha256="17nvxqxbbdv4qdallld5f2c6nhhszsz7ja04rhz5g3844s87bv2f"; depends=[caret futile_logger ggplot2 Rcpp reshape2]; }; darksky = derive2 { name="darksky"; version="1.3.0"; sha256="1740cw5qifgvqa0nafd6lmllxi32n1zm45zlify1yn3h1qdcszhb"; depends=[ggplot2 gridExtra gtable httr plyr]; }; - dartR = derive2 { name="dartR"; version="0.93"; sha256="1mkap7dvbd6j4d2zqp9kdld06ds78fi4w01w7zqmnvz3xzigp3li"; depends=[adegenet ape data_table DBI Demerelate directlabels dismo doParallel foreach ggplot2 MASS misc3d pca3d pegas plotly plyr quadprog qvalue reshape2 rgl seqinr SNPassoc SNPRelate StAMPP stringr tidyr vegan]; }; + dartR = derive2 { name="dartR"; version="1.0"; sha256="1pp739vwvs4k2a3xnkywvaxppkr764zgf5jfrf8l8830jidg2fsc"; depends=[adegenet ape data_table DBI Demerelate directlabels dismo doParallel foreach ggplot2 MASS misc3d pca3d pegas plotly plyr quadprog qvalue reshape2 rgdal rgl seqinr SNPassoc SNPRelate sp StAMPP stringr tidyr vegan]; }; darts = derive2 { name="darts"; version="1.0"; sha256="07i5349s335jaags352mdx8chf47ay41q7b0mh2xjwn2h9kzgqib"; depends=[]; }; dashboard = derive2 { name="dashboard"; version="0.1.0"; sha256="1znqwvz49r47lp6q48qaas0s63wclgybav82a247qvcavzns3kip"; depends=[Rook]; }; - dat = derive2 { name="dat"; version="0.3.0"; sha256="1mzkxjyph4xka32c6bl0krr7723sch15x9wh8v9rcawn0gwnknmj"; depends=[aoos data_table dplyr Formula magrittr progress tibble]; }; + dat = derive2 { name="dat"; version="0.4.0"; sha256="1nw16hsw9b4hpcl5rqrlw6yk9y2h1pd0ra1c7iz82sknkyd5afi6"; depends=[aoos data_table dplyr Formula magrittr progress tibble]; }; data_table = derive2 { name="data.table"; version="1.10.4-3"; sha256="12caklgr19vy9wprdks6zh825vr1iw1cajgwcnbpyvmijqdlz2xs"; depends=[]; }; - data_tree = derive2 { name="data.tree"; version="0.7.3"; sha256="1r442a1mbmrv7x88769kbz4p32cy8hacliahbls2qsr2ikbk1w2p"; depends=[DiagrammeR R6 stringr]; }; - data_world = derive2 { name="data.world"; version="1.1.1"; sha256="0kmlls8wicyfjxl27pajkagi4ps1s85rd7ywwfjfrkzkangy05xz"; depends=[dwapi httr ini]; }; + data_tree = derive2 { name="data.tree"; version="0.7.4"; sha256="0yyk5sc07i987k77advpsjk2kdnral9x85bsd8rrl0x7i2cjdbhf"; depends=[DiagrammeR R6 stringr]; }; + data_world = derive2 { name="data.world"; version="1.2.0"; sha256="0bw1yi5qwnm3fx8d7j2q9r9fyzf4c10z3m4yxs1srp3z77i8v6d9"; depends=[dwapi httr ini miniUI shiny stringi]; }; data360r = derive2 { name="data360r"; version="1.0.1"; sha256="1g245zg70ch81zjmd1ng16lks38qr0a6m63y582w558mza7v148g"; depends=[curl data_table jsonlite reshape2]; }; dataCompareR = derive2 { name="dataCompareR"; version="0.1.1"; sha256="06nba2yir2yz1189bsag9yavdf9hfmpswxdy92dlnbz9d27jjsic"; depends=[dplyr knitr markdown stringi]; }; - dataMaid = derive2 { name="dataMaid"; version="1.0.0"; sha256="0hf3jff9qz789nsnnvqdxcw23mzilk4krywzvyh5kr2hpzsbx1l4"; depends=[ggplot2 gridExtra haven htmltools magrittr pander robustbase whoami]; }; + dataMaid = derive2 { name="dataMaid"; version="1.1.0"; sha256="1scpyc0c4rcb0hk1dnzaqprb59n9vrngkg2h1h1knl5klxabkj2y"; depends=[ggplot2 gridExtra haven htmltools magrittr pander robustbase whoami]; }; dataMeta = derive2 { name="dataMeta"; version="0.1.1"; sha256="13xxayqxbps07h0xr5b7sb7q30gy5zm7jzzaq4k20fskkjrzhzcm"; depends=[dplyr]; }; - dataPreparation = derive2 { name="dataPreparation"; version="0.3.2"; sha256="1cdsyv03y27iggdg3j352lwy7lxaczg9lb9xb6wwj2p0xaq1rhih"; depends=[data_table lubridate Matrix progress stringr]; }; + dataPreparation = derive2 { name="dataPreparation"; version="0.3.5"; sha256="186xi3nbjgqwf8kilinzd92kzwdazgcpmbb5q420vrs2va6dv0x8"; depends=[data_table lubridate Matrix progress stringr]; }; dataQualityR = derive2 { name="dataQualityR"; version="1.0"; sha256="0f2410sd6kldv7zkqsmbz1js0p5iq7zwlnfwmmnlbrd303p35p3j"; depends=[]; }; dataRetrieval = derive2 { name="dataRetrieval"; version="2.7.3"; sha256="0lrv6fyqi7k079wdpqilgjlb4j2qfs3r02d9ip8s9yznfwqsl826"; depends=[curl dplyr httr jsonlite lubridate readr reshape2 xml2]; }; datacheck = derive2 { name="datacheck"; version="1.2.2"; sha256="1i3n5g1b6ix8gpn4c74s7ll1dbrllrzgpb1f3hk449d6p4kmisq6"; depends=[Hmisc shiny stringr]; }; @@ -5278,25 +5387,26 @@ in with self; { datafsm = derive2 { name="datafsm"; version="0.2.1"; sha256="16l6ssprsvnpzxlfnqj7r061x700704s5gdci5x9ixdjmglakmdd"; depends=[caret GA Rcpp]; }; datamap = derive2 { name="datamap"; version="0.1-1"; sha256="0qm4zb9ldg4wz1a7paj5ilr1dhyagq81rk9l2v43hmkv52sssgkv"; depends=[DBI]; }; datamart = derive2 { name="datamart"; version="0.5.2"; sha256="0c0l157fzkcp30ch4ymaalcx18zhz6sa5srr50w9izhbx3pmldxp"; depends=[base64 gsubfn markdown RCurl RJSONIO XML]; }; - dataonderivatives = derive2 { name="dataonderivatives"; version="0.3.0"; sha256="17588r2b528ylchdh8aa1k7q7w7wc3f2mxixif8j6snzpwsvwpzc"; depends=[assertthat httr lubridate readr tibble]; }; + dataonderivatives = derive2 { name="dataonderivatives"; version="0.3.1"; sha256="0q1zd1l7l0hmbs1bx469d706rmprjbz2f2dgcnfp9wxfgqpfxkz1"; depends=[assertthat httr lubridate readr tibble]; }; dataone = derive2 { name="dataone"; version="2.1.0"; sha256="0vpa4gb30dvxax4sxbnbn8gblnzdfcf2k0v5js3gqwjb95ah4w4y"; depends=[base64enc datapack hash httr jsonlite parsedate plyr stringr uuid XML]; }; datapack = derive2 { name="datapack"; version="1.3.1"; sha256="0hzc68vgjvpm235zg8k2642c3jzh3ls9kp6lpz720y1b56q8k3n7"; depends=[digest hash redland uuid XML]; }; - datapasta = derive2 { name="datapasta"; version="2.0.0"; sha256="100nqw315xdzxpzn1gmx4881zli4lwzwckdvqjciysv4l5gvzzfm"; depends=[clipr readr rstudioapi]; }; - datarobot = derive2 { name="datarobot"; version="2.7.1"; sha256="13aabv0h1ssfd3llbqgapcfgd0x87h99bdzhhfhmkr84mzd6pzpv"; depends=[curl httr jsonlite yaml]; }; + datapasta = derive2 { name="datapasta"; version="3.0.0"; sha256="022ci7iy683lh3fh13a4b3szzqp6j4fchil695bifhi0a34bnxyr"; depends=[clipr readr rstudioapi]; }; + datarobot = derive2 { name="datarobot"; version="2.8.0"; sha256="06yqp1lvskvcyiz8a2jy7kzv721qrvf5ycw6g9jl2bj84raifmap"; depends=[curl httr jsonlite yaml]; }; datasauRus = derive2 { name="datasauRus"; version="0.1.2"; sha256="1ixfc1v0iv5jb4920957xhpq9kchdy482vdsm51wj1961ldrkhvh"; depends=[]; }; dataseries = derive2 { name="dataseries"; version="0.2.0"; sha256="11wc2p5m8qbdmkpbd21lpwl28a1dpab88c3gqyrhsn0298lpnip4"; depends=[]; }; datasets_load = derive2 { name="datasets.load"; version="0.1.0"; sha256="029rxg0h17nszkxgq5kjd0njymb8pgdsabmz5slshzd2ijjh82jz"; depends=[DT miniUI shiny]; }; datastepr = derive2 { name="datastepr"; version="0.0.2"; sha256="039yggdj8jdici7hwmkjwgix45lvwjl7rw5h2rfzsm9xaq6vw1z2"; depends=[dplyr lazyeval magrittr R6 tibble]; }; - datastructures = derive2 { name="datastructures"; version="0.2.0"; sha256="03jyn1ksxpgva4r22h06lkyrm5ar8xxk3ssaskwqw7l5482i6rvf"; depends=[BH Rcpp]; }; + datastructures = derive2 { name="datastructures"; version="0.2.1"; sha256="05m9zrqil1qmjax3r86wn6k1fq4v7x3hwq2hs9n36lyhj06r031y"; depends=[BH Rcpp]; }; datasus = derive2 { name="datasus"; version="0.4.0"; sha256="18mvgdzk2f2plzgz9w47w4zxbdz24rymxvjv08j0cm242pcl11l7"; depends=[dplyr httr magrittr RCurl readr rvest stringi stringr xml2]; }; datautils = derive2 { name="datautils"; version="0.1.5"; sha256="1yy25a84zmfh54jvxwa7mv4j296rmjgd40m4p81mrsswlqvncmfn"; depends=[deldir gplots gtools]; }; dataverse = derive2 { name="dataverse"; version="0.2.0"; sha256="0lyga8rdsir2yr1n9nr10iiaf6a7dxp1nb04bx8mq8ljrvpkgr8n"; depends=[httr jsonlite xml2]; }; dataview = derive2 { name="dataview"; version="2.1.1"; sha256="1nn33h5c1h4a3zm1xm7sdz4s6sy0f3r53jhm7bv6qk7aiylwqf6v"; depends=[data_table xtermStyle]; }; - date = derive2 { name="date"; version="1.2-37"; sha256="0321kqvpy5cvl8hmm6pd0pyjpi30glm8hvw60mrql6y28sn6pqhl"; depends=[]; }; + date = derive2 { name="date"; version="1.2-38"; sha256="1ziy17kz02j7lals14s43rs9lmxxfn2ppfi55q4b3m4gfj9pr4jc"; depends=[]; }; datetime = derive2 { name="datetime"; version="0.1.2"; sha256="0qbd1makidkbpr26wkxchnb8rpwzm4l42j4vipwwmfwv3gpslmjx"; depends=[]; }; datetimeutils = derive2 { name="datetimeutils"; version="0.2-7"; sha256="1ql44k6s0pskc7kg28aly9k7ncl58gzs80d9gpwyjdhrgimimcxk"; depends=[]; }; + datoramar = derive2 { name="datoramar"; version="0.1.0"; sha256="0zq6vhq6dmsyagmqrmb85z6fy9qhwra3s3iasr3jgc4ryr009pml"; depends=[httr jsonlite tibble]; }; dave = derive2 { name="dave"; version="2.0"; sha256="1rraphpp34czyjj15xzvj1ihlnqzcppqls9n2g85n49zv0n1ngn8"; depends=[cluster labdsv nnet tree vegan]; }; - dawai = derive2 { name="dawai"; version="1.2.2"; sha256="1zc4zrgqdjgja1284wqfxdhq0hfwp231mnr49f158l6bnhlp82n4"; depends=[boot ibdreg mvtnorm]; }; + dawai = derive2 { name="dawai"; version="1.2.3"; sha256="18dg81d1018f8ibm4p43ih6fjgm6r0qs5phqbp7pqrixjj3ydk58"; depends=[boot ibdreg mvtnorm]; }; dbConnect = derive2 { name="dbConnect"; version="1.0"; sha256="1vab5l4cah5vgq6a1b9ywx7abwlsk0kjx8vb3ha03hylcx546w42"; depends=[gWidgets RMySQL]; }; dbEmpLikeGOF = derive2 { name="dbEmpLikeGOF"; version="1.2.4"; sha256="0vhpcxy702cp3lvlif2fzmvccys8iy7bv1fbg6ki2l8bvn2f7c5p"; depends=[]; }; dbEmpLikeNorm = derive2 { name="dbEmpLikeNorm"; version="1.0.0"; sha256="0h5r2mqgallxf9hin64771qqn9ilgk1kpsjsdj2dqfl3m8zg967l"; depends=[dbEmpLikeGOF]; }; @@ -5306,25 +5416,26 @@ in with self; { dblcens = derive2 { name="dblcens"; version="1.1.7"; sha256="02639vyaqg7jpxih8cljc8snijb78bb084f4j3ns6byd09xbdwcw"; depends=[]; }; dblr = derive2 { name="dblr"; version="0.1.0"; sha256="0wzmhmp706mw0pkh81nsb7qzclwyhm6f2mjvpvz043ng5xrxwvvw"; depends=[CatEncoders data_table Metrics xgboost]; }; dbmss = derive2 { name="dbmss"; version="2.5-1"; sha256="1giwbzjgz2qiry9mmqyby1jxpdsxaifv1p227i9jyq9d46gs9qiy"; depends=[cubature Rcpp RcppParallel spatstat spatstat_utils]; }; - dbplot = derive2 { name="dbplot"; version="0.1.1"; sha256="1nppk4fh20jhy94anx1jzmhrlnvyghiy217ydsvh7yy6pij3ax37"; depends=[dplyr rlang]; }; - dbplyr = derive2 { name="dbplyr"; version="1.1.0"; sha256="17gn8vr4a6m9ynarjbm9xsrhcvgn5lnxhb2qhiiglmhh5mm4a7kv"; depends=[assertthat DBI dplyr glue purrr R6 rlang tibble]; }; + dbplot = derive2 { name="dbplot"; version="0.2.0"; sha256="1yc75bqc0na44jrkmabbdvjhhcqz0cd09k1bgxh0wrg52h829ni5"; depends=[dplyr rlang]; }; + dbplyr = derive2 { name="dbplyr"; version="1.2.1"; sha256="1nwrls9c3kc9q7405jp6b9sh23642sz13yw55iikgw134shffj5k"; depends=[assertthat DBI dplyr glue purrr R6 rlang tibble tidyselect]; }; dbscan = derive2 { name="dbscan"; version="1.1-1"; sha256="09rh3x4g3xv5f1p8wbc847z8khj7v2r5vz9yf1lfdiy23q2w3xp1"; depends=[Rcpp]; }; dbstats = derive2 { name="dbstats"; version="1.0.5"; sha256="0pr80mx8y87l96hhg0rp3ajxl7yx2f8qr0y1zrjkbzxavjmp9k34"; depends=[cluster pls]; }; dc3net = derive2 { name="dc3net"; version="1.2.0"; sha256="19ibsvbnq6y88vqvgkm31zrqwjhpml59d792bz0zkk50r1q5bnyr"; depends=[c3net igraph RedeR]; }; dcGOR = derive2 { name="dcGOR"; version="1.0.6"; sha256="0rvwa25r23yayx1i6xhkfaw2z85d2iyfx3slg3aq1m0fa7kj380p"; depends=[dnet igraph Matrix]; }; dcemriS4 = derive2 { name="dcemriS4"; version="0.55"; sha256="15x4hjc5fwpn80h90q5x9a3p84pp3mxsmcx4hq5l0j52l9dy9nv3"; depends=[oro_nifti]; }; - dclone = derive2 { name="dclone"; version="2.1-2"; sha256="0s3s46hvlsivfhrc559y0b3dc5m6g11cv3fwy4asigh8lqjc972d"; depends=[coda Matrix rjags snow]; }; + dclone = derive2 { name="dclone"; version="2.1-3"; sha256="15jm5vsdpy4fzgrn1xgv4mjp02jblc7jba3d3375g5vfhzrm3zva"; depends=[coda Matrix rjags snow]; }; dcminfo = derive2 { name="dcminfo"; version="0.1.7"; sha256="03r0ynzc5cck2rz20zbg5zx8v6s66ivizqav1pjkyvp6kxkmnf8q"; depends=[CDM]; }; dcmle = derive2 { name="dcmle"; version="0.3-1"; sha256="1d6zk9413h30wcw8q1gnjzk67vshmjcpnh8zjxrsh1h69i1z6rpy"; depends=[coda dclone lattice]; }; dcmodify = derive2 { name="dcmodify"; version="0.1.1"; sha256="1a909v6jhihwwmq7lzv2xazrkfa1553kbrjsbjfsh1qrqdiam3sr"; depends=[settings validate yaml]; }; dcmr = derive2 { name="dcmr"; version="1.0"; sha256="1a89wr1n8sykjbwa316zlmcffaysksrqnbd89anxqj8sgw9xv6jq"; depends=[ggplot2 KFAS plyr reshape2 tableplot]; }; dcv = derive2 { name="dcv"; version="0.1.1"; sha256="12c716x8dnxnqksibpmyysqp2axggvy9dpd55s9bhnsvqvi6dshj"; depends=[lmtest]; }; ddR = derive2 { name="ddR"; version="0.1.2"; sha256="00mb9xq69dvl50v5429nw0mjazgjwh2sp98w8n2cwhhamjgp42k9"; depends=[Rcpp]; }; - ddalpha = derive2 { name="ddalpha"; version="1.3.1"; sha256="0pczw9543y7f92m7gyk7rxcjn8vsjaldc5vl0r56ywip9i374zbh"; depends=[BH class MASS Rcpp robustbase sfsmisc]; }; + ddalpha = derive2 { name="ddalpha"; version="1.3.1.1"; sha256="13w8ir5rd80rka4mq343zd4wn93vfw870lzfqrd3cxgwb1bwcw7y"; depends=[BH class MASS Rcpp robustbase sfsmisc]; }; ddeploy = derive2 { name="ddeploy"; version="1.0.4"; sha256="06s4mn93sl33gldda9qab8l3nqig8zq0fh1s2f98igsysmn31br5"; depends=[httr jsonlite]; }; ddpcr = derive2 { name="ddpcr"; version="1.8"; sha256="11bk4mhiqn73sjji2wz47v7jqqg9kq3amci9m6a88h4fvvgmpcz4"; depends=[dplyr DT ggplot2 lazyeval magrittr mixtools plyr readr shiny shinyjs]; }; ddst = derive2 { name="ddst"; version="1.4"; sha256="1y0immm337adkd2bjx8c5pf02w9wysv3gj26f4qf0jiba0f2wk8n"; depends=[evd orthopolynom]; }; deBInfer = derive2 { name="deBInfer"; version="0.4.1"; sha256="05khyjpyxwrm9q8jsysffgsjpjbw76w9rrl7i8ia0yc9lv0bzjc9"; depends=[coda deSolve MASS mvtnorm PBSddesolve plyr RColorBrewer truncdist]; }; + deGradInfer = derive2 { name="deGradInfer"; version="1.0.0"; sha256="1wl1pw1rwins4gr47a8ii4diw6wd6cx8ib4l5bhri5f3crbw7l86"; depends=[deSolve gdata gptk]; }; deSolve = derive2 { name="deSolve"; version="1.20"; sha256="18nx3maww979a8p8ly4hv63y65mnjx8vbj2fpipd6rhcbf1lbsan"; depends=[]; }; deTestSet = derive2 { name="deTestSet"; version="1.1.5"; sha256="07wbgniwkpp0yry6wvchvszr8isxs1i9k6km951r5c009w1iviwk"; depends=[deSolve]; }; deadband = derive2 { name="deadband"; version="0.1.0"; sha256="02pq3d0l0wy8bdlyfir3zf46j1ascx4qajyq5cf28yl62q6ngq5d"; depends=[TTR]; }; @@ -5346,12 +5457,11 @@ in with self; { deepboost = derive2 { name="deepboost"; version="0.1.6"; sha256="1nf9gjk9gjl2dz7cr3vh5lg8nxkbqwr82a132nw853axbdgbs9ga"; depends=[Rcpp]; }; deepnet = derive2 { name="deepnet"; version="0.2"; sha256="09crwiq12wzwvdp3yxhc40vdh7hsnm4smqamnk4i6hli11ca90h4"; depends=[]; }; default = derive2 { name="default"; version="1.0.0"; sha256="0hzxgp9la9kll5cw3m4gd02rii571xsn1v53kz407k7k6rfg5mda"; depends=[]; }; - define = derive2 { name="define"; version="0.2.5"; sha256="11wrp20mdcmj4n2hbg9ws8z2myqk21pgcj0fin03gzc8qhmmaskd"; depends=[encode Hmisc latexpdf SASxport spec]; }; deformula = derive2 { name="deformula"; version="0.1.1"; sha256="0h85yzl8kvjwrn1mkzyblvknf7gg8kx8y85qnvkwfbr9ik42ngn1"; depends=[]; }; - defrostR = derive2 { name="defrostR"; version="1.0.0"; sha256="1ncj4qjbalb3v4kcp82wmik9p32lm5rc6cw2fqll88cni49mr62f"; depends=[XML]; }; + defrostR = derive2 { name="defrostR"; version="1.1.0"; sha256="03asq36kd37592bjfb4mq0wfh2nkymrz1rxpq67ny1cq2159s83j"; depends=[XML]; }; degenes = derive2 { name="degenes"; version="1.1"; sha256="1xxn5j06qizywimrp1pl8z3yjdy1a167b9jnm77gmv87rp6j240c"; depends=[]; }; degreenet = derive2 { name="degreenet"; version="1.3-1"; sha256="0k0a1c1bv7zclrarfzf0d6avbd8zjnc3zd155jzmhi8dacr6r73w"; depends=[igraph network]; }; - deisotoper = derive2 { name="deisotoper"; version="0.0.1"; sha256="0wv6zc73f038i8vwl03nhfiipdkn3599g8gw0fdp4a1fy61cp6m6"; depends=[rJava]; }; + deisotoper = derive2 { name="deisotoper"; version="0.0.3"; sha256="1263cgwzgl3dnv1y9qhzjl4b7r69h59x38ggb7c8zn7g6qbdc0kc"; depends=[rJava]; }; dejaVu = derive2 { name="dejaVu"; version="0.2.0"; sha256="1cnbgssdnvl092vz0j2n4bamvysrr0n9wy6ycz2mkm5wvf4r296i"; depends=[MASS]; }; deldir = derive2 { name="deldir"; version="0.1-14"; sha256="12cjr4r50rdrh2l0105cvd42rqwzsmmiqcax3sbqk1ggh2lnblw9"; depends=[]; }; delt = derive2 { name="delt"; version="0.8.2"; sha256="06g03wy9r2qvly0lnv5fv4k366mhlk56qkvak0xaxy99p1i34kmv"; depends=[denpro]; }; @@ -5362,12 +5472,12 @@ in with self; { demoKde = derive2 { name="demoKde"; version="0.9-4"; sha256="0p4v808m42wbv8ibdfqzm43cbbg0yl452wnm1mzqq2n37z6yljkr"; depends=[]; }; demogR = derive2 { name="demogR"; version="0.5.0"; sha256="1y7pkf1m8fqjsvs0szyaqga2y7p3dvj0r85nz8nzqbmy4zrrv4w8"; depends=[]; }; demography = derive2 { name="demography"; version="1.20"; sha256="097k0chs8shm1r9ny6jdx2kp2shyxsivjw1n1rhb3bs0m0l3vm9r"; depends=[cobs forecast ftsa mgcv rainbow RCurl strucchange]; }; - dendextend = derive2 { name="dendextend"; version="1.6.0"; sha256="0pichh08zi12lpxzc061dmv4smj6lizygd1xymln8wfz18sf7923"; depends=[fpc ggplot2 magrittr viridis whisker]; }; - dendroTools = derive2 { name="dendroTools"; version="0.0.4"; sha256="004446g3h0vdwif1jhgwy5x7lrjjkb9x0x0sqf5qaaxm90q2wzk9"; depends=[brnn caret dcv dplyr ggplot2 MLmetrics oce randomForest reshape reshape2 RWeka scales]; }; - dendroextras = derive2 { name="dendroextras"; version="0.2.2"; sha256="1a42g29w9dvmwrfd244a8ixak6asbkqhzmggl0c4j5fkrp74fpll"; depends=[]; }; + dendextend = derive2 { name="dendextend"; version="1.7.0"; sha256="1krvqadnnh53xx5ql7bwzxaif6a317jzbs1m00gnc6jnj03rfl5d"; depends=[fpc ggplot2 magrittr viridis whisker]; }; + dendroTools = derive2 { name="dendroTools"; version="0.0.6"; sha256="0mqzlysp0kihs9ymz8y3agvjl6ihn996cmpw331c4jb5n7vhjx0r"; depends=[brnn caret dplyr ggplot2 gridExtra MLmetrics oce randomForest reshape reshape2 RWeka scales]; }; + dendroextras = derive2 { name="dendroextras"; version="0.2.3"; sha256="0hb7crbgsnbcwvbk05iz5ik45n7zgysmwjj6xc46131yd8l0i1qx"; depends=[]; }; dendrometeR = derive2 { name="dendrometeR"; version="1.0.0"; sha256="1par27ipgbfbrmdlwvkf82i5dgnfrcawmavakrf8lplin2hhb7gs"; depends=[forecast pspline zoo]; }; dendsort = derive2 { name="dendsort"; version="0.3.3"; sha256="1m4qh79ppfvipmbi8m8vwq0hqmwwipbg5izihz5j6x8a4g5i6iym"; depends=[]; }; - denoiSeq = derive2 { name="denoiSeq"; version="0.1.0"; sha256="0jsq8qz7bm314gsa3vyavh3ychicqsm5z9yj0vz0jgihmlrdqaxk"; depends=[]; }; + denoiSeq = derive2 { name="denoiSeq"; version="0.1.1"; sha256="18w69gxbnazg5k8bzi76slcqxnbfmrndp548zazz8bpxz3jns699"; depends=[]; }; denoiseR = derive2 { name="denoiseR"; version="1.0"; sha256="094nknr3hyx4kv18vnpdzrcpmfb4r7x9jgrp3p6x4nwrgzdh3r95"; depends=[FactoMineR irlba Matrix]; }; denovolyzeR = derive2 { name="denovolyzeR"; version="0.2.0"; sha256="03ya5clzqp12lfhw073ri0pwgxn53a6pvnais317a8bv1yinxspb"; depends=[dplyr reshape2]; }; denpro = derive2 { name="denpro"; version="0.9.2"; sha256="19hrpfd44jaavq81dbyj3frris4aflfc8lig0471whv0pc6jci2k"; depends=[]; }; @@ -5385,10 +5495,10 @@ in with self; { derivmkts = derive2 { name="derivmkts"; version="0.2.2"; sha256="00bcffqzzsm2h4gfwri772q8i7h40xhv07wl8xj682fnlk246ggs"; depends=[mnormt]; }; desc = derive2 { name="desc"; version="1.1.1"; sha256="0k07qighac1xzmm8k988zi7i88a0yfvia3gk5hbz0fyvb2v9kzrj"; depends=[assertthat crayon R6 rprojroot]; }; descomponer = derive2 { name="descomponer"; version="1.4"; sha256="12zpkixclm6jmrgzvcy48c1mdqh9dgadzf9026wjyamphxkkjbip"; depends=[taRifx]; }; - descr = derive2 { name="descr"; version="1.1.3"; sha256="0fp91gbxxxvn2hqdyddhb3x85031wgq7gnqrhzjr956prlv086r6"; depends=[xtable]; }; + descr = derive2 { name="descr"; version="1.1.4"; sha256="05maviw8l8qhmy7p80gs3dlyy6pqk5k1686ny4xla4psj8mr7lbk"; depends=[xtable]; }; describer = derive2 { name="describer"; version="0.2.0"; sha256="1pjyihmn4gkaamixsc3qwynsc02pwv9bgn6s7z7acmmsybhhs6xn"; depends=[]; }; - descriptr = derive2 { name="descriptr"; version="0.2.0"; sha256="1295pgw69v2r60pqff01mcrj619lg769y6x8dilwffl767w0d95n"; depends=[dplyr forcats magrittr tibble]; }; - desctable = derive2 { name="desctable"; version="0.1.0"; sha256="002x4zjrcjz0xxh924z00rka1c61ldrj6lypakkf3p4hbwid6j30"; depends=[dplyr DT htmltools pander purrr]; }; + descriptr = derive2 { name="descriptr"; version="0.4.0"; sha256="1v21fb90vhh7mjx9q29cbdvbxyi8sjcfbvdxf0xd8n7fkd6gd4yj"; depends=[dplyr forcats ggplot2 magrittr rlang scales shiny tibble tidyr]; }; + desctable = derive2 { name="desctable"; version="0.1.1"; sha256="188pw8fjgm2g88nraagmxbnpv4gg89vm6mxm9w9vk88iq4hgbhjc"; depends=[dplyr DT htmltools pander purrr]; }; deseasonalize = derive2 { name="deseasonalize"; version="1.35"; sha256="1fjsa7g34dckjs6mx9b10m99byxagggm0p9pw2f1vmpjqlasin0l"; depends=[FitAR lattice]; }; desiR = derive2 { name="desiR"; version="1.2.1"; sha256="0ghcv96bbwn74mka4dpf2lkpnlikjn3q6lx2sl8bbw77nriap0n6"; depends=[]; }; designGG = derive2 { name="designGG"; version="1.1"; sha256="1x043j36llwd7kd4skbpl2smz2ybsxjqf5yd1xwqmardq60gdv2w"; depends=[]; }; @@ -5397,22 +5507,25 @@ in with self; { desirability = derive2 { name="desirability"; version="2.1"; sha256="094gxvp6a60lfcc0a0gk9rv1p6ajnzq9m58sy8cvhcj5337g4fmk"; depends=[]; }; desire = derive2 { name="desire"; version="1.0.7"; sha256="0jmj644nj6ck0gsk7c30af9wbg3asf0pqv1fny98irndqv508kf6"; depends=[loglognorm]; }; desplot = derive2 { name="desplot"; version="1.3"; sha256="06aa4ijxk34z9v309jnsapa7bc95wx2g2hbasljwrb90f2z87wq9"; depends=[lattice reshape2]; }; - detect = derive2 { name="detect"; version="0.4-0"; sha256="119kvkgpgd12v31ps1bg5dmc9djkaqzls548nlrvn1pbmahfnfx5"; depends=[Formula pbapply]; }; + detect = derive2 { name="detect"; version="0.4-1"; sha256="0hq3imp4w6bd8x4njcfrvcs5lf0vrfnags1zdph86d7hlrwfds62"; depends=[Formula Matrix pbapply]; }; + detectRUNS = derive2 { name="detectRUNS"; version="0.9.5"; sha256="0w4pz7waaabgsb47xcmgiz8bzlrs2a83y3v6j7bqb5125y1wn8hw"; depends=[data_table ggplot2 gridExtra iterators itertools plyr Rcpp reshape2]; }; detector = derive2 { name="detector"; version="0.1.0"; sha256="010i063b94hzx7qac8gpl67gmk7hzgqm9i1c7pbbw4la3wcd9lz7"; depends=[stringr]; }; + detpack = derive2 { name="detpack"; version="1.0.1"; sha256="00qyjhv7y5mk4h0a428i780fsvlamqnxv12kl6lqs776rhf0skfv"; depends=[]; }; detrendeR = derive2 { name="detrendeR"; version="1.0.4"; sha256="1z10gf6mgqybb9ml6z3drq65n7g28h2pqpilc2h84l6y76sy909c"; depends=[dplR]; }; - detrendr = derive2 { name="detrendr"; version="0.1.0"; sha256="1h092pivq6hk93mi9bbvcr8pjdmpry55ysxlbg7lhkh4ac6a0ryx"; depends=[abind BBmisc checkmate doParallel dplyr fields filesstrings foreach iterators magrittr purrr radiant_data Rcpp RcppParallel RSAGA tiff]; }; - detzrcr = derive2 { name="detzrcr"; version="0.2.0"; sha256="10868k4vmc5n8y0xx123klp7hz6fnycsssg9nnq3nm1z36fmgcb7"; depends=[ggplot2 MASS shiny]; }; + detrendr = derive2 { name="detrendr"; version="0.4.0"; sha256="0syxd5bds81ihm692bgps7wwl4n5fvi08jwd90hxaddksdskf2p6"; depends=[autothresholdr checkmate doParallel dplyr filesstrings foreach ijtiff iterators magrittr purrr Rcpp RcppParallel rlang RSAGA stringr]; }; + detzrcr = derive2 { name="detzrcr"; version="0.2.1"; sha256="1y1lbckm4a4m50x2a47r1wk47z4m4pvkslwgzcvw00nch47h9d8s"; depends=[ggplot2 MASS shiny]; }; devEMF = derive2 { name="devEMF"; version="3.6"; sha256="1n5i68f1j3d5yp0p0845zsvr4xhjrvj610wsb5rrlf90jwnarsx2"; depends=[]; }; - devRate = derive2 { name="devRate"; version="0.1.5"; sha256="04ka09ic8ai7c4qx448win2k311ih588xmxdj0k38nidl7gknsc2"; depends=[]; }; - devtools = derive2 { name="devtools"; version="1.13.4"; sha256="1az1qf50vyhm4w6k2a6wqw3pqc8jv2iqzdhs36cg079hx9swm0mb"; depends=[digest git2r httr jsonlite memoise rstudioapi whisker withr]; }; - dexter = derive2 { name="dexter"; version="0.5.1"; sha256="0nkm3yjv86kmyv433c0mm2g30f053v0wqf2hddymm2l12cqm5lp2"; depends=[colorspace DBI dbplyr dplyr DT fastmatch purrr rlang rprintf RSQLite shiny shinyBS shinydashboard tidyr]; }; + devFunc = derive2 { name="devFunc"; version="0.1"; sha256="0f2s5gssk9napmah7zcss1rnh7pzlq90gzwcnvyr9rrq6k118n8q"; depends=[plyr stringr]; }; + devRate = derive2 { name="devRate"; version="0.1.6"; sha256="0wm6nqnr76azpwg00cspi4n8r4w5qfkvm5qqp0kshv701pnbsjbp"; depends=[]; }; + devtools = derive2 { name="devtools"; version="1.13.5"; sha256="1x3wsk7dh3yakii61kbfvafx9yz66h40ixiwfkf03dnp2n24hngs"; depends=[digest git2r httr jsonlite memoise rstudioapi whisker withr]; }; + dexter = derive2 { name="dexter"; version="0.6.0"; sha256="1qz4j33y6n115gijxs1jg5712g8cmsv7406cx6bsm2zswvv7ra22"; depends=[colorspace DBI dbplyr dplyr DT fastmatch purrr RColorBrewer rlang rprintf RSQLite shiny shinyBS shinydashboard tibble tidyr]; }; df2json = derive2 { name="df2json"; version="0.0.2"; sha256="10m7xn7rm4aql1bzpckjcx5kvdw44m1pxgzqkgkd40lzqb1cwk18"; depends=[rjson]; }; dfCompare = derive2 { name="dfCompare"; version="1.0.0"; sha256="1lhx69j0bkjbnp5jz23hrbxjcf04vf3big4k593ixz003xs2077f"; depends=[]; }; - dfcomb = derive2 { name="dfcomb"; version="2.3"; sha256="0bgbjqv15y0wv48zzkc8pssyadcbrqy1chddiq3l91499kcw9ya6"; depends=[BH Rcpp RcppArmadillo RcppProgress]; }; + dfcomb = derive2 { name="dfcomb"; version="2.4-2"; sha256="163sc18ka4wkf208ml7ghjsn43b3mbyf9zm4id563az6ckkzw45p"; depends=[BH Rcpp RcppArmadillo RcppProgress]; }; dfcrm = derive2 { name="dfcrm"; version="0.2-2"; sha256="1kwgxfqnz2bcicyb27lp6bnvrj30lqjpn5fg7kaqshgkj53g0s4f"; depends=[]; }; dfexplore = derive2 { name="dfexplore"; version="0.2.1"; sha256="04nbhn59l1kas26nwj4qflkjvvr33sj1mm7zg7fhvya85gvlhrbf"; depends=[ggplot2]; }; - dfmta = derive2 { name="dfmta"; version="1.5"; sha256="1npa7hvcaimhjp31hbvwj1xhriryghwny3nnnp7vpvmy54i7hx84"; depends=[BH Rcpp RcppArmadillo RcppProgress]; }; - dfoptim = derive2 { name="dfoptim"; version="2016.7-1"; sha256="1hs0ln5iz3h1x1b27jai83r3gad6698zwhr2jgpviiv9zwhic8c2"; depends=[]; }; + dfmta = derive2 { name="dfmta"; version="1.6-2"; sha256="0icpgsxhzd9y0d3xv82cy807wylxck7zn31g0b3nv0nq3jxy04jk"; depends=[BH Rcpp RcppArmadillo RcppProgress]; }; + dfoptim = derive2 { name="dfoptim"; version="2017.12-1"; sha256="03sh92ks29hcdy4ma1b5rs29f65q65wi30j1pxkmsjxkp8179jgf"; depends=[]; }; dfped = derive2 { name="dfped"; version="1.0"; sha256="0xhyh5sm1a009pwfn2yb3vg2hr4sfpf9ifg09hqcvjx56pxfd8zh"; depends=[ggplot2 rstan]; }; dfphase1 = derive2 { name="dfphase1"; version="1.1.1"; sha256="0bk4bl5lqd7m4mzk6kg71fmh918wcy85zghr3lyayxlk30fl4ppc"; depends=[lattice Rcpp robustbase]; }; dfpk = derive2 { name="dfpk"; version="3.4.0"; sha256="0fvvyn1zc0s0z4xaqinf8im2ynmbs7irh9q9h66ym1pxmrqhb5zw"; depends=[BH dfcrm ggplot2 PK Rcpp RcppEigen rstan StanHeaders]; }; @@ -5421,19 +5534,18 @@ in with self; { dglars = derive2 { name="dglars"; version="2.0.0"; sha256="0nhljv02cfsna4d220nhla4fs84hr30qs9j32mml0brnmazyjj0n"; depends=[Matrix]; }; dglm = derive2 { name="dglm"; version="1.8.3"; sha256="0vj4vddqcrjzgqsi6zsxm22gj5pa5dm50wcxip4vi8kbwxaahnaj"; depends=[statmod]; }; dgmb = derive2 { name="dgmb"; version="1.2"; sha256="1r5md917wipx78n63x87fpvsc3h87c68cpacrrs9dhss199p1a5k"; depends=[abind MASS]; }; - dgo = derive2 { name="dgo"; version="0.2.11"; sha256="1x29qmkq7jvxg8z6h36qxiznqpg9iygn3i4zb22infyyi85vplpy"; depends=[assertthat data_table dgodata ggplot2 lubridate R6 rstan survey]; }; + dgo = derive2 { name="dgo"; version="0.2.14"; sha256="0pizzyqgnng3g5g9q2qa5wcwfdl94rz69ah071qx01k03fzayg86"; depends=[assertthat data_table dgodata ggplot2 lubridate R6 rstan survey]; }; dgodata = derive2 { name="dgodata"; version="0.0.2"; sha256="03cyiig8pn7fdkrkrd29cwy5g63bp57bpl9jmdxfi03smngzbz0m"; depends=[]; }; dgof = derive2 { name="dgof"; version="1.2"; sha256="02qnb3i131hx05k8l5n3xbl5sqmmc2fh19bsgcacgj8ixs4wyjvi"; depends=[]; }; dhga = derive2 { name="dhga"; version="0.1"; sha256="1n48irj53g3kn451ak5ly50wxdn7qmzi2kib8clsvcx2n7mvpgcm"; depends=[VennDiagram]; }; dhglm = derive2 { name="dhglm"; version="1.7"; sha256="09wasgvjw0xc9k68m6a8lx372p2hywk4j6ikr9wjjjfl6f17j1cw"; depends=[boot MASS Matrix numDeriv]; }; di = derive2 { name="di"; version="1.1.3"; sha256="1i3s1rw62iy49141b3lqy5d97iwcj6ihdhsz2716v2497c39qhhy"; depends=[scales]; }; - diagis = derive2 { name="diagis"; version="0.1.3"; sha256="0ni7xqpnzr5drdw12sslm7d7amwzaifhlr2pw6b4f264wcab72i8"; depends=[coda ggplot2 gridExtra Rcpp RcppArmadillo]; }; + diagis = derive2 { name="diagis"; version="0.1.3-1"; sha256="1cagcr5znhrg4fp96d79ly0z7bs3hhh3zfspclyfc88p2p3qsd96"; depends=[coda ggplot2 gridExtra Rcpp RcppArmadillo]; }; diagonals = derive2 { name="diagonals"; version="0.4.0"; sha256="03n6lm0hkgylswgj1qlgrjigm7basl5frip99mxx19mvaqa3bhqy"; depends=[]; }; diagram = derive2 { name="diagram"; version="1.6.4"; sha256="0f6ffprn5k0ir1s7m9s7izc64aa17r3gnygagz5bihrlsvawaavw"; depends=[shape]; }; diaplt = derive2 { name="diaplt"; version="1.2.1"; sha256="0pya6rqzsvc5nd3smhydvabarglc4nn04q605vbllmbhq9rv00pa"; depends=[]; }; dice = derive2 { name="dice"; version="1.2"; sha256="0gic7lqnsdmwv3dbzwwmcwdfyfqlq8kpr2pciqphd1j2ligzwl3s"; depends=[gtools]; }; - diceR = derive2 { name="diceR"; version="0.2.0"; sha256="0ppalp0nlg6xcp1q2zi6l33bkkh1f4fjmfj38401h13bz2lhhkri"; depends=[abind apcluster assertthat blockcluster caret class clue cluster clusterCrit clValid dbscan dplyr e1071 flux ggplot2 gplots Hmisc infotheo kernlab klaR kohonen largeVis magrittr mclust NMF progress purrr quantable RankAggreg RColorBrewer Rcpp Rtsne sigclust tidyr]; }; - dicecrawler = derive2 { name="dicecrawler"; version="0.1.0"; sha256="04cfzc6qldfaga4mj7bw8hdbznl6jr5h91nq20c74khv5g7vas7m"; depends=[curl jsonlite rvest xml2]; }; + diceR = derive2 { name="diceR"; version="0.3.2"; sha256="1mhn34p0m0iaz9z4xy20z48nrnrh84i1bdhl48zmnwx165vbg392"; depends=[abind apcluster assertthat blockcluster caret class cli clue cluster clusterCrit clValid dbscan dplyr e1071 flux ggplot2 gplots Hmisc infotheo kernlab klaR kohonen largeVis magrittr mclust NMF progress purrr quantable RankAggreg RColorBrewer Rcpp Rtsne sigclust stringr tibble tidyr]; }; dichromat = derive2 { name="dichromat"; version="2.0-0"; sha256="1l8db1nk29ccqg3mkbafvfiw0775iq4gapysf88xq2zp6spiw59i"; depends=[]; }; dicionariosIBGE = derive2 { name="dicionariosIBGE"; version="1.6"; sha256="1rss1ydhcn6sma2lmlpq6s0h3dglwc20w499x1jzkcjnzc1rc7gl"; depends=[]; }; didrooRFM = derive2 { name="didrooRFM"; version="1.0.0"; sha256="12clfnbm56jwldw0afb0nb0argnd97mx7369jiywhxy0p4xqibqq"; depends=[dplyr]; }; @@ -5449,15 +5561,16 @@ in with self; { diffMeshGP = derive2 { name="diffMeshGP"; version="0.1.0"; sha256="1dc37hxh3fi27gw11kij57j78p87bza77s82niagdv6dqhldj5a4"; depends=[]; }; diffdepprop = derive2 { name="diffdepprop"; version="0.1-9"; sha256="0mgrm1isr26v2mcm6fkzc7443ji00vpnqmw4zngx81n7442b3cl2"; depends=[gee PropCIs rootSolve]; }; diffeR = derive2 { name="diffeR"; version="0.0-4"; sha256="08g21h3yq8rm2i6ah364nfadg7hnghc21jnpi5aqwzqyd2v93b67"; depends=[ggplot2 raster rgdal]; }; - diffobj = derive2 { name="diffobj"; version="0.1.7"; sha256="0a90jd9y0sifna2hjjrbzmma8kd1nb73c97yapcr2dfpcqdrfkhv"; depends=[crayon]; }; + diffobj = derive2 { name="diffobj"; version="0.1.9"; sha256="1adqn472qbwrfb8m2iy3sfvj2n8g3d4h6xc3hqxpbv03yyfia2c2"; depends=[crayon]; }; diffpriv = derive2 { name="diffpriv"; version="0.4.2"; sha256="12q2v93369bshid83rsy1csbr9ay6rfpd8zdxm12zi7py3f9sjs8"; depends=[gsl]; }; diffr = derive2 { name="diffr"; version="0.1"; sha256="0ydwnpyzirynffsnvip667y0jqzy7yfqlfpqhb38xvmd9rmwfbp8"; depends=[htmlwidgets]; }; diffractometry = derive2 { name="diffractometry"; version="0.1-8"; sha256="1m6cyf1kxm9xf1z4mn4iz0ggiy9wcyi8ysbgcsk7l78y7nqh1h99"; depends=[]; }; diffrprojects = derive2 { name="diffrprojects"; version="0.1.14"; sha256="1mnqf5zs1w8dx9y5iwn4blyzb9j60ayzc04zxj5l8804nd527n25"; depends=[dplyr hellno magrittr R6 Rcpp RSQLite rtext stringb stringdist]; }; diffrprojectswidget = derive2 { name="diffrprojectswidget"; version="0.1.5"; sha256="1h69mc1wayi80vz4b9cqydylf4kp9mxsigv05r0f903pqakdrzcw"; depends=[diffrprojects dplyr hellno htmlwidgets jsonlite magrittr tidyr]; }; + diffusion = derive2 { name="diffusion"; version="0.2.7"; sha256="1j9s9vw5sc4k956bk4yp3bf4fnp7lhhkwcvlzvsh1w4dyaj8l35h"; depends=[dfoptim nloptr systemfit]; }; diffusionMap = derive2 { name="diffusionMap"; version="1.1-0"; sha256="1l985q2hfc8ss5afajik4p25dx628yikvhdimz5s0pql800q2yv3"; depends=[igraph Matrix scatterplot3d]; }; diffusr = derive2 { name="diffusr"; version="0.1.2"; sha256="1rvfbs757rngxz7z3kq82nwls26qx35gkjiv1laay06kjs9qrgy5"; depends=[igraph Rcpp RcppEigen]; }; - digest = derive2 { name="digest"; version="0.6.12"; sha256="1awy9phxdvqnadby7rvwy2hkbrj210bqf4xvi27asdq028zlcyd4"; depends=[]; }; + digest = derive2 { name="digest"; version="0.6.15"; sha256="1ia4ak956gnn0f5aqhwgam6g9z6f1y57zz8jv45jc8h79yxp8bl8"; depends=[]; }; digitalPCR = derive2 { name="digitalPCR"; version="1.1.0"; sha256="0hwqq84yr1hnvf4bygc5425887dhqjjjyy1ils71iavcal04s8pb"; depends=[]; }; digitize = derive2 { name="digitize"; version="0.0.4"; sha256="1qw4x4z9vrs79sd9b2daw668nc6nvjl4qhayfqmd87yxa2ydv6x0"; depends=[readbitmap]; }; dils = derive2 { name="dils"; version="0.8.1"; sha256="1q6ba9j14hzf7xy895mzxc6n9yjgind55jf350iqscwzxf7ynp33"; depends=[igraph Rcpp]; }; @@ -5467,10 +5580,11 @@ in with self; { diptest = derive2 { name="diptest"; version="0.75-7"; sha256="0rcgycgp0bf8vhga1wwgfcz3pqs5l26hgzsgf2f97dwfna40i1p1"; depends=[]; }; directPA = derive2 { name="directPA"; version="1.3"; sha256="0hcs56y69gdkfyk2xl0vxh01c19s6z1lfv02g056wxr24qfsx08c"; depends=[calibrate rgl]; }; directlabels = derive2 { name="directlabels"; version="2017.03.31"; sha256="01ahw0c56mnzwl611s8hnghicww4c4dgf5v2wv6bl1s1pramw9pr"; depends=[quadprog]; }; + dirichletprocess = derive2 { name="dirichletprocess"; version="0.2.0"; sha256="1q6rnrzyvkz9hn9czlm9sha80qsmrz7n4l3r8r1plkgrnf0biajv"; depends=[ggplot2 gtools mvtnorm]; }; dirmcmc = derive2 { name="dirmcmc"; version="1.3.3"; sha256="117p3jvinmha7a2phcpzq38ig05kcranp15xbxqvv0cgh3c95fjr"; depends=[mcmcse]; }; dirmult = derive2 { name="dirmult"; version="0.1.3-4"; sha256="1r9bhw1z0c1cgfv7jc0pvdx3fpnwplkxwz8j8jjvw14zyx803rnz"; depends=[]; }; discSurv = derive2 { name="discSurv"; version="1.1.7"; sha256="0shxwxbvbbgp0qphpbih582d5psqj5n0izv7zvcw97vh82bzra4l"; depends=[functional mgcv mvtnorm]; }; - discgolf = derive2 { name="discgolf"; version="0.1.0"; sha256="15bk2k7glahcbz4kyl3fiayi7ck6z3wabl9y25fg6cnxkbyh6dbn"; depends=[httr jsonlite xml2]; }; + discgolf = derive2 { name="discgolf"; version="0.2.0"; sha256="07clh1awnibgrh7vl4a51r8dbya2rbmicm8v8x8mq8h8am2b3j0s"; depends=[crul jsonlite xml2]; }; disclap = derive2 { name="disclap"; version="1.5"; sha256="0piv9gxhxcd4pbh5qjn9c3199f32y3qiw5vy8cr77ki70dnmr66n"; depends=[]; }; disclapmix = derive2 { name="disclapmix"; version="1.6.2"; sha256="01pn8hy3xbf1b1fbbsd4n2hv7gs97zalgq858xsrr4a0nqrvxmn5"; depends=[cluster disclap Rcpp]; }; disco = derive2 { name="disco"; version="0.5"; sha256="1rjylqmijc8yg20hkhqh24asxzs2g55dgbh4scp60nsf2lnw1pz8"; depends=[ggplot2 RColorBrewer tmod]; }; @@ -5489,6 +5603,7 @@ in with self; { dispmod = derive2 { name="dispmod"; version="1.1"; sha256="141gzhnmxxl495cpjgd4wnvdrbz6715m6sd1pycrbaqrsdc1pv57"; depends=[]; }; disposables = derive2 { name="disposables"; version="1.0.3"; sha256="0q5wacjclspn2fh7z1pg2l67ll51n75wck5h2fdq2vxy3qn3vwis"; depends=[]; }; dissUtils = derive2 { name="dissUtils"; version="1.0"; sha256="00fzlmkdfw2s3k824wp2pk3v7cvxnywi1hfp86g4mm95z2qlw9br"; depends=[]; }; + dissever = derive2 { name="dissever"; version="0.2-2"; sha256="0s4g84lq15i00vpaafwmcbspdqy23cbj2fbyfnq60mzllyzgs0n2"; depends=[boot caret dplyr foreach magrittr plyr raster sp viridis]; }; distance_sample_size = derive2 { name="distance.sample.size"; version="0.0"; sha256="0hlf3kp34rg1gnkxp4k3rnv0shv4fpgb0rhx3a6x5692lhyigbcs"; depends=[MASS]; }; distances = derive2 { name="distances"; version="0.1.2"; sha256="17872h4jw6cgdk40vczjlygnays2v0wdh64mz5isk7zkvqs0x1ld"; depends=[]; }; distcomp = derive2 { name="distcomp"; version="1.0-1"; sha256="0f69bxw52ai39dmkmfvrs0lbibcgmv6n849xa9xgd2jm5mvbc58f"; depends=[digest httr jsonlite R6 shiny stringr survival]; }; @@ -5506,14 +5621,14 @@ in with self; { distrSim = derive2 { name="distrSim"; version="2.6"; sha256="1kq85ivnw4mplpr2jmc2w19kvk0d1wffz6laypay2j5gyd8fm44x"; depends=[distr setRNG startupmsg]; }; distrTEst = derive2 { name="distrTEst"; version="2.6"; sha256="1c0xwpyr5gs89psiflcz5dplsb1g9r651jiqg8nxcqa05r9kyhkr"; depends=[distrSim setRNG startupmsg]; }; distrTeach = derive2 { name="distrTeach"; version="2.6.1"; sha256="0x60xlij1m9q7xhi9vnf61vb2px9aah8iqaki6d87c1pxylmqnvr"; depends=[distr distrEx startupmsg]; }; - distrom = derive2 { name="distrom"; version="0.3-3"; sha256="1kpbrsa7ml72zvmdcpbbz2rsv4lpqd5i2w3v488ji6nbi44v1gp6"; depends=[gamlr Matrix]; }; + distrom = derive2 { name="distrom"; version="1.0"; sha256="0wylw7yaylf5j8cy8g45jrw91mwx6w0i7vf9ysnj5kxyznq1gl6y"; depends=[gamlr Matrix]; }; distrr = derive2 { name="distrr"; version="0.0.4"; sha256="0nywvgcbk2i2n2qa80yk68zikl2fs7nybhq540808rjksldh9pvy"; depends=[dplyr lazyeval magrittr tidyr]; }; divagis = derive2 { name="divagis"; version="1.0.0"; sha256="1kcz7i3h9xxpqhlq0rl08pgcwd16ygjjmm0jjv9knn2ggc3j1jzz"; depends=[rgdal sp]; }; - diveMove = derive2 { name="diveMove"; version="1.4.3"; sha256="18420gm1cb0pinp05n08cj5qgf9rmn5ksr7bfq464s61isrhmzhy"; depends=[caTools geosphere KernSmooth quantreg uniReg]; }; + diveMove = derive2 { name="diveMove"; version="1.4.4"; sha256="0mq3nkcn1w8mry9lda6fkycb1a5qmkyzpckwxbrvsyc5kyyx755c"; depends=[caTools geosphere KernSmooth quantreg uniReg]; }; diveRsity = derive2 { name="diveRsity"; version="1.9.90"; sha256="11pfq3syvjmfwfimjc2jnlprcnynvargr4yjd8h0aa6qzgdrrx5q"; depends=[ggplot2 qgraph Rcpp shiny]; }; diverse = derive2 { name="diverse"; version="0.1.5"; sha256="10kmx3qv58xhqs1icsxqq0y0cm8y2hx9ysb65brd3hhg33alzvk3"; depends=[foreign proxy reshape2]; }; diversitree = derive2 { name="diversitree"; version="0.9-10"; sha256="0gh4rcrp0an3jh8915i1fsxlgyfk7njywgbd5ln5r2jhr085kpz7"; depends=[ape deSolve Rcpp subplex]; }; - divest = derive2 { name="divest"; version="0.4.1"; sha256="08ifl924392lnq96j6r25x0ji18jcx6chg3bmbv9gh783vwv476b"; depends=[Rcpp RNifti]; }; + divest = derive2 { name="divest"; version="0.5.0"; sha256="07qv8zjhajyjc7yhm3kk33xj806rxv92810d52gvk4iwgmgczl78"; depends=[Rcpp RNifti]; }; divo = derive2 { name="divo"; version="1.0.0"; sha256="0xy4yxvx2grskdzb5z73mhgrq0nfhdkm2hxahdns7pb1fgajxyjx"; depends=[cluster]; }; dixon = derive2 { name="dixon"; version="0.0-6"; sha256="1prvr16a9n7qyaznir2bl7mg6nlvbdv9pk75p3xipzjg36hwyam8"; depends=[spatstat splancs]; }; dkDNA = derive2 { name="dkDNA"; version="0.1.1"; sha256="0ycyzn5bmhjl5idp0lndffkninpm9n23wrkrzi59ac8z8ghsnhf4"; depends=[]; }; @@ -5521,41 +5636,40 @@ in with self; { dlm = derive2 { name="dlm"; version="1.1-4"; sha256="0hyphl90bqc16j7in750pmiyq28hmc46kxgv7gj17c8xl9c9xqxm"; depends=[]; }; dlmap = derive2 { name="dlmap"; version="1.13"; sha256="0s6wlkggkm3qndwyvw72xv1n0mcjb7ss3ajbq2ll6rv30splq0db"; depends=[ibdreg mgcv nlme qtl wgaim]; }; dlmodeler = derive2 { name="dlmodeler"; version="1.4-2"; sha256="06gqvk2wrzz4kpsh4vyrbqwmxirsvg78qj7clvcxdac0sfqn4gl7"; depends=[KFAS]; }; - dlnm = derive2 { name="dlnm"; version="2.3.2"; sha256="1gkpdy1mgnhiabfrfi41p3n8kzh2l480qrf3v50n8p3xcjamiagp"; depends=[mgcv nlme tsModel]; }; - dlsem = derive2 { name="dlsem"; version="1.9"; sha256="1j72w9lpxsmlf39458pq72mgy6yz4rnsyx4d7s08rvl1jh32a8ni"; depends=[graph gRbase nnet Rgraphviz]; }; + dlnm = derive2 { name="dlnm"; version="2.3.4"; sha256="08k9x29iakgnzf4zbj6bgv6i4812mhbgraxm468wvv8ia574dm1m"; depends=[mgcv nlme tsModel]; }; + dlsem = derive2 { name="dlsem"; version="2.1"; sha256="17azc4b8lxy7bcsrpki17nbc4imyfzvq6fmvngw80xjxlc316agx"; depends=[graph gRbase Rgraphviz]; }; dlstats = derive2 { name="dlstats"; version="0.1.0"; sha256="0s92rdpw3m534wgjaic4srsp9i1pa3ibfmr4h7p3ly51zhza6l5h"; depends=[ggplot2 jsonlite magrittr RColorBrewer scales]; }; dma = derive2 { name="dma"; version="1.3-0"; sha256="12gjrk0dp5w49wf0zkwc16vf8hd82822k88zb9fax3dklwm1dd3p"; depends=[MASS mnormt]; }; dml = derive2 { name="dml"; version="1.1.0"; sha256="0z1dalgxh5nhrac49vh60d5awzjylc8b8mn5fk379c324milm59l"; depends=[lfda MASS]; }; - dmm = derive2 { name="dmm"; version="2.1-2"; sha256="0z4irgm8wlyb31xmmwcknjn1jg76j5kyfqyqpbykcgvnp29mip54"; depends=[MASS Matrix nadiv pls robustbase]; }; + dmm = derive2 { name="dmm"; version="2.1-3"; sha256="0hxd4k721imicnc97h319gxs6n4plyl9y9sr5hc7pwas543dm7k3"; depends=[MASS Matrix nadiv pls robustbase]; }; dmt = derive2 { name="dmt"; version="0.8.20"; sha256="0rwc8l9k2y46hslsb3y8a1g2yjxalcvp1l3v7jix0c5kz2q7917w"; depends=[MASS Matrix mvtnorm]; }; dmutate = derive2 { name="dmutate"; version="0.1.2"; sha256="06gr49j5jz6ns1zydwsqysgkigi2sbm4hdd2jbb82f05rd9spyf3"; depends=[dplyr MASS]; }; dna = derive2 { name="dna"; version="1.1-1"; sha256="0gw70h1j67h401hdvd38d6jz71x1a6xlz6ziba6961zy6m3k5xbm"; depends=[]; }; - dnc = derive2 { name="dnc"; version="1.2"; sha256="0a0nc1yx6vhbjsik9pidda97i7s6ndlsm8pzx29ccmxlmqncc18b"; depends=[BayesLogit igraph MCMCpack movMF plot3D plot3Drgl Rcpp RcppArmadillo skmeans vegan]; }; - dnet = derive2 { name="dnet"; version="1.1.1"; sha256="1pj31586li19dybfvwljmpv18k6k2mvrx6g0a8rjjdcqczasf8yr"; depends=[graph igraph Matrix Rgraphviz supraHex]; }; + dnet = derive2 { name="dnet"; version="1.1.2"; sha256="0y31cj55ry3xv4p7hy3maynk6ds8kmmgr2fd5afqhlrjkfry7zan"; depends=[graph igraph Matrix Rgraphviz supraHex]; }; dng = derive2 { name="dng"; version="0.1.1"; sha256="04r06k6mmif7kbpham52dq2zv5rijjnsdc3sgxz6kbh5mqdn6jfq"; depends=[Rcpp]; }; doBy = derive2 { name="doBy"; version="4.5-15"; sha256="0n1ml47f78nqhy92a0fgsb4brz0qyfr4q3c7im8pnb0ngia4ssdx"; depends=[MASS Matrix]; }; doFuture = derive2 { name="doFuture"; version="0.6.0"; sha256="04pvs2h1ibdbl6cph30rvdn5vzj9afllvh8f0iy64pgy83vls790"; depends=[foreach future iterators]; }; - doMC = derive2 { name="doMC"; version="1.3.4"; sha256="0y47jl6g4f83r14pj8bafdzq1phj7bxy5dwyz3k43d2rr8phk8bn"; depends=[foreach iterators]; }; + doMC = derive2 { name="doMC"; version="1.3.5"; sha256="1vfrykvfvsyq12mypd266867ml1dcwc3rj5k9c3wrn5bddcm88kr"; depends=[foreach iterators]; }; doMPI = derive2 { name="doMPI"; version="0.2.2"; sha256="0ahwm17p3gq1yvc8v6sr6sb8z7i6zws8d1pf46qynl0gd4amg938"; depends=[foreach iterators Rmpi]; }; doParallel = derive2 { name="doParallel"; version="1.0.11"; sha256="0sppgxk3d8mfsrb3cjdyn0mv0s4i7pcy8g8c3cjzbr6k8vmx5jsc"; depends=[foreach iterators]; }; doRNG = derive2 { name="doRNG"; version="1.6.6"; sha256="0xnqrc74qncg5iv4cvq0vh3r1sd407wvzx0hfpy8j2rcqy12574k"; depends=[foreach iterators pkgmaker rngtools]; }; doRedis = derive2 { name="doRedis"; version="1.1.1"; sha256="10ldfzq6m83b9w24az9bf5wbfm6y9gi233s8qgsk4dnr84n3nizx"; depends=[foreach iterators rredis]; }; - doSNOW = derive2 { name="doSNOW"; version="1.0.15"; sha256="1xfnv3infhlwb4yqi53raj0212l8fgcgwgzm0kxlyf8rzjflm9rm"; depends=[foreach iterators snow]; }; - dobson = derive2 { name="dobson"; version="0.1"; sha256="0w7bkk3v9j455zzmidjgxsqqwgd44wzz1akhjgc3p71ilsyh0sff"; depends=[]; }; + doSNOW = derive2 { name="doSNOW"; version="1.0.16"; sha256="13ir4a8252h4yvp5ir9xnwack1kn58i4ny6sf2qdc12zspn3850n"; depends=[foreach iterators snow]; }; + dobson = derive2 { name="dobson"; version="0.2"; sha256="1fyf4dyzpg6hqdvr8n4ncs4dny8mg23nxbd49jd3mrlajszzg0vp"; depends=[]; }; docker = derive2 { name="docker"; version="0.0.2"; sha256="00zq4zmv2y6q069q92dn8db2bj96kfy7pv2s58q21dxkp1c4s6qg"; depends=[reticulate]; }; docopt = derive2 { name="docopt"; version="0.4.5"; sha256="1pwng6018ls0hk785bs8yjwpzsqr2pcvzgpavqd9rw19n5lvzhxn"; depends=[stringr]; }; docopulae = derive2 { name="docopulae"; version="0.3.3"; sha256="13889sj509gbl9zs7jqdvslp6sc81jv54cbqh1wpp834jp5s1q3x"; depends=[]; }; docstring = derive2 { name="docstring"; version="1.0.0"; sha256="19z5frhxbdc5c4vrkckgqbh9mx4d9w1icw8szsw9yadvbg48nlhl"; depends=[roxygen2]; }; docuSignr = derive2 { name="docuSignr"; version="0.0.3"; sha256="0q90z31svbdnvylfr0yj2f0gahvpi089c1d5llvwqy8qc5p9fbqw"; depends=[httr jsonlite magrittr]; }; documair = derive2 { name="documair"; version="0.6-0"; sha256="1pphcbx90n9xn8a7gvfrwzfapwqgpbl3gg2grm7chfxgcp7i99i2"; depends=[]; }; - document = derive2 { name="document"; version="2.1.0"; sha256="1f9dr6kvmdb3lgxka2j5jr3ar1p4h0f2f7a1qqbq8a69s7f4qa7z"; depends=[callr checkmate devtools roxygen2 rstudioapi]; }; + document = derive2 { name="document"; version="3.0.0"; sha256="1jd7pgifnlffibmmsflgp0gbv83qclqsfi8glvr9kfxw66yx0mhq"; depends=[callr checkmate desc rcmdcheck roxygen2 rstudioapi withr]; }; docxtools = derive2 { name="docxtools"; version="0.1.1"; sha256="1mlgl9105mifzdgf57spgr2rr5740ghr5afmlskxn6ind7jfka70"; depends=[dplyr ggplot2 pander stringr tidyr]; }; docxtractr = derive2 { name="docxtractr"; version="0.2.0"; sha256="197j57ab8x960b1yfq6xp8fwmq51xs04nf0cb16r161h4bcmgs2j"; depends=[dplyr purrr tibble xml2]; }; dodgr = derive2 { name="dodgr"; version="0.0.3"; sha256="161qy9iyszpb44v26zn6w4d7c9bw8pg7vwgqcba0k0xc5dnr2wjc"; depends=[igraph magrittr osmdata rbenchmark Rcpp sp]; }; domino = derive2 { name="domino"; version="0.3.1"; sha256="0f67w0z5jy82kgm3l1rji430ayigw30vmmwp3i1nz0xibsx7jxv4"; depends=[]; }; dosresmeta = derive2 { name="dosresmeta"; version="2.0.1"; sha256="0qdalzdk7q4wx3vl5f3i64m8cb7vhi4pqzghar32j0a7l6gla04z"; depends=[mvmeta]; }; dostats = derive2 { name="dostats"; version="1.3.2"; sha256="15j9sik9j5pic5wrp0w26xkrhi337xkbikw0k7sa4yfimw6f84w5"; depends=[]; }; - dotCall64 = derive2 { name="dotCall64"; version="0.9-04"; sha256="0qp6magpp0jaa0b9sfkbxd91afayl24kj0yrh0ix1v3ahdnaar8f"; depends=[]; }; + dotCall64 = derive2 { name="dotCall64"; version="0.9-5.2"; sha256="1jw0kyw95nivjimh25ri9sigqwlvk12kd45ydsh1yggigzc0k23k"; depends=[]; }; dotenv = derive2 { name="dotenv"; version="1.0.2"; sha256="13i8dimrgq9nxmmrxr42pacsiylj6dilwpa8ldnrfp4cl9zgrqas"; depends=[]; }; dotwhisker = derive2 { name="dotwhisker"; version="0.3.0"; sha256="1sbj8blnqnsyvf7pq2cc9q7nqb66n0v2gi2rr09yjlppf7v1pcjf"; depends=[broom dplyr ggplot2 ggstance gridExtra gtable plyr stringr]; }; doubcens = derive2 { name="doubcens"; version="1.1"; sha256="1hn65n67by3xqbcnaf5jja5pli0g6wpbbz2sfzd7i2nms7kiywhp"; depends=[]; }; @@ -5566,27 +5680,30 @@ in with self; { dparser = derive2 { name="dparser"; version="0.1.8"; sha256="1yx425s3iq03j043g41pyfp3cgmajb4qh50zirhd0qpplzwy8xj5"; depends=[digest]; }; dpcR = derive2 { name="dpcR"; version="0.4"; sha256="02j7fhhfq7p2wfcnr7rdy65v6dcvdym3nfyps7717p7b429chchc"; depends=[binom chipPCR dgof e1071 evd multcomp pracma qpcR rateratio_test readxl shiny signal spatstat]; }; dpglasso = derive2 { name="dpglasso"; version="1.0"; sha256="1mx28xbm2z2bxyp33wv2v6vgn1yfsdsa0bzjjdxasgd6lvr51myf"; depends=[]; }; - dplR = derive2 { name="dplR"; version="1.6.6"; sha256="04b0j9l2gkkycjjn16zbhv0kczhrij0bsnrdyh9qd6z53pvd3ryc"; depends=[digest lattice Matrix matrixStats plyr png R_utils stringi stringr XML]; }; + dplR = derive2 { name="dplR"; version="1.6.7"; sha256="0i4s4anklia0bnygqrkk35gnc972qfnvzr3sfzwz7jxghigw7k8l"; depends=[animation digest lattice Matrix matrixStats plyr png R_utils stringi stringr XML]; }; dplRCon = derive2 { name="dplRCon"; version="1.0"; sha256="10xnawgnhxp5y949fxs1vvadc1qz2ldy0s9w9w7kf6iqh59d35sw"; depends=[]; }; dplyr = derive2 { name="dplyr"; version="0.7.4"; sha256="1hm8ml7yaraag1ak6kvz2mxx6if568c759ix8a1n9d7va03wj7vv"; depends=[assertthat BH bindrcpp glue magrittr pkgconfig plogr R6 Rcpp rlang tibble]; }; + dplyr_teradata = derive2 { name="dplyr.teradata"; version="0.1.1"; sha256="1fbvfd02zp408knv1ryjs4nwg8zi5vbbpgn7gxqiyzwbfqizkkqy"; depends=[bit64 DBI dbplyr dplyr odbc]; }; dplyrAssist = derive2 { name="dplyrAssist"; version="0.1.0"; sha256="1lqizh70b1apyr4578917gv6s0i7p84ak96a57kvwipmh36a4ywn"; depends=[DT magrittr miniUI plyr rstudioapi shiny shinyAce shinyWidgets stringr tidyr tidyverse]; }; dpmixsim = derive2 { name="dpmixsim"; version="0.0-8"; sha256="0paa2hmpd6bqf0m7p9j7l2h3j18lm64ya6ya8zvp55wm8pf7xgqg"; depends=[cluster oro_nifti]; }; dpmr = derive2 { name="dpmr"; version="0.1.9"; sha256="1cnjywkvjb4fhbf4shjmsrq47f1fg2x21hcm1q5512bm0wg9i6jd"; depends=[digest httr jsonlite magrittr rio]; }; dprep = derive2 { name="dprep"; version="3.0.2"; sha256="0iw1pqpqlv436wpwh1w832aqvy91zvxmbk2jdw7aczrb29wys2bj"; depends=[class e1071 FNN MASS nnet rgl rpart StatMatch]; }; + dprint = derive2 { name="dprint"; version="0.0.4"; sha256="13bq6yjlp5p5rcsz684rqcigp42xnz3p5phnqmrhzm874gfzm8rj"; depends=[]; }; dr = derive2 { name="dr"; version="3.0.10"; sha256="0dmz4h7biwrn480i66f6jm3c6p4pjvfv24pw1aixvab2vcdkqlnf"; depends=[MASS]; }; dr4pl = derive2 { name="dr4pl"; version="1.0.0"; sha256="1gcddnjmzqm16vzqvh8hxw2spvfa41jmapf7n87lv100j5f8ahl5"; depends=[devtools drc ggplot2 Matrix Rdpack tensor testthat]; }; drLumi = derive2 { name="drLumi"; version="0.1.2"; sha256="09ps8rcqrm6a1y8yif2x82l0k4jywq60pkndh9nzfpbsw4ak2lby"; depends=[chron gdata ggplot2 Hmisc irr minpack_lm msm plyr reshape rootSolve stringr]; }; - drake = derive2 { name="drake"; version="4.4.0"; sha256="0s4xw3h9irhlzv17w9zz613i5giw1swvbfvi4fvdj7pr70wsijgv"; depends=[codetools crayon digest eply evaluate future igraph knitr lubridate magrittr plyr R_utils rprojroot storr stringi stringr testthat visNetwork withr]; }; - drat = derive2 { name="drat"; version="0.1.3"; sha256="14q2ahy51b8mlp7fb0nbwzy5hcnlg1z73wgi85sxx4pyq1ycp4zn"; depends=[]; }; + drake = derive2 { name="drake"; version="5.0.0"; sha256="0hldxadlcl3m249rb68yikvn4gck98zj2x67jjxfgas27a1n4pjx"; depends=[codetools crayon digest evaluate formatR future future_apply igraph knitr lubridate magrittr plyr R_utils rprojroot storr stringi stringr testthat visNetwork withr]; }; + drat = derive2 { name="drat"; version="0.1.4"; sha256="0vrpqf793vinx4v7jrbn910iplvpmrlwhdjqqzx8cl2k9hl43x08"; depends=[]; }; drawExpression = derive2 { name="drawExpression"; version="1.0"; sha256="0c2daicqrjlqf7s788cknzvw9c6rm500lgmwfr7z03bq7bd2ah90"; depends=[]; }; drc = derive2 { name="drc"; version="3.0-1"; sha256="0c8xn8ripzq270hy8d16fcnx02l02alddznd7fqwk3jyi6113h1y"; depends=[car gtools MASS multcomp plotrix scales]; }; drfit = derive2 { name="drfit"; version="0.7.1"; sha256="1k2chmhdwd78a5d1pxi3iskzfb4h1fxp51ji72qs73m3i6s2mqpz"; depends=[drc MASS qcc reshape2 RODBC]; }; drgee = derive2 { name="drgee"; version="1.1.6"; sha256="01404mqvkvndn5gybq8dgkfc1cy9wk94p7k7i64h47w3zbkcwsax"; depends=[data_table nleqslv Rcpp RcppArmadillo survival]; }; + driftR = derive2 { name="driftR"; version="1.0.0"; sha256="0mlhv22xmgiq4a680rk9d39gk2p1b5lrkvvmqjzmlynfy9f8bkj0"; depends=[dplyr ggplot2 glue magrittr readr rlang stringr tibble]; }; drm = derive2 { name="drm"; version="0.5-8"; sha256="1p6ixd7hnv41gfmvan3rv9xzz1279hmrnvfrl6pxwzs9zcnbb53a"; depends=[]; }; drmdel = derive2 { name="drmdel"; version="1.3.1"; sha256="1bpm9jj9dxk2daxp1yb7pn9jd750p27qa84vdfxpacm5r0mggnys"; depends=[]; }; dropR = derive2 { name="dropR"; version="0.1"; sha256="0sw5lqlfdn64dbykxdhk1pz18f83if871vkapa2nxgcfiy79b0vs"; depends=[plyr shiny]; }; drsmooth = derive2 { name="drsmooth"; version="1.9.0"; sha256="1wgi961bvbsnq4bygxbpy4sy5fy34lrrkaaj0r2rxcahwa1sc38n"; depends=[boot car DTK lubridate mgcv multcomp pgirmess segmented]; }; - drtmle = derive2 { name="drtmle"; version="1.0.0"; sha256="1fnzgy3sq5nys7qw8g5bhmzw92azripjg6pb93vxrfsbr4agmmrz"; depends=[foreach np plyr SuperLearner]; }; + drtmle = derive2 { name="drtmle"; version="1.0.2"; sha256="02i75qj1l0zd518dmkv4qdbd6r8xqrxvsg6ahaxi6pwy00dvqnqm"; depends=[doFuture future future_batchtools np plyr SuperLearner]; }; ds = derive2 { name="ds"; version="3.0"; sha256="10xp575l0wh85wg32k3as02kgqm9ax9nx9i5kd5bkimfwg4qv745"; depends=[]; }; dsample = derive2 { name="dsample"; version="0.91.2.2"; sha256="18c0zxaqwgbn9kmkwlnicwd74ljy2sxj0b9ksif13pdlj3zn57h1"; depends=[MASS]; }; dse = derive2 { name="dse"; version="2015.12-1"; sha256="1976h57zallhzq43nshg77bsykcvkfwnasha1w59c44fjpl1gs9w"; depends=[setRNG tfplot tframe]; }; @@ -5600,41 +5717,43 @@ in with self; { dtangle = derive2 { name="dtangle"; version="0.1.0"; sha256="1i9wjg31ldhiyl01znzcalhwsi6yfqzxi1xdpivkzxhf25bp932r"; depends=[]; }; dti = derive2 { name="dti"; version="1.2-6.1"; sha256="1p88k7qkmas49niq618jhddc0h4mwh5gd267v6rlzzpmv5f98fkb"; depends=[adimpro awsMethods gsl oro_dicom oro_nifti quadprog rgl]; }; dtplyr = derive2 { name="dtplyr"; version="0.0.2"; sha256="1q75xnk52zfxnphj095dppcqdmk9v1n32069rffpnvr39nnik565"; depends=[data_table dplyr lazyeval]; }; - dtree = derive2 { name="dtree"; version="0.2.3"; sha256="03kma2hb373gd87yr10yn76i20r0yncxjfamgpnijr2yf6b5fq20"; depends=[caret evtree party partykit rpart]; }; + dtree = derive2 { name="dtree"; version="0.4.2"; sha256="1cpv0pyf515610djxzfw1c83p3alk5a93clg4x9gk7a7qy4cyhr1"; depends=[caret evtree party partykit rpart]; }; dtt = derive2 { name="dtt"; version="0.1-2"; sha256="0n8gj5iylfagdbaqirpykb01a9difsy4zl6qq55f0ghvazxqdvmn"; depends=[]; }; dtw = derive2 { name="dtw"; version="1.18-1"; sha256="1b91vahba09cqlb8b1ry4dlv4rbldb4s2p6w52gmyw31vxdv5nnr"; depends=[proxy]; }; dtwSat = derive2 { name="dtwSat"; version="0.2.3"; sha256="10b0hs9kn5ljfv28iz62h966zb1pxsfrr6fx45d4427gr6fg8ncz"; depends=[caret dtw ggplot2 lubridate mgcv plyr proxy raster RColorBrewer reshape2 rgdal scales sp xtable zoo]; }; - dtwclust = derive2 { name="dtwclust"; version="4.1.1"; sha256="1awpqch4jdm70x6hjhzp3g98yikg12sv82zfyd2jwjh4nssiawh1"; depends=[BH bigmemory clue dtw flexclust foreach ggplot2 Matrix plyr proxy Rcpp RcppArmadillo reshape2 rngtools RSpectra]; }; + dtwclust = derive2 { name="dtwclust"; version="5.2.0"; sha256="0wabb6mhc0h73lpxjg29hdb9kpy7gdp6mddhdwcgc560v5skyqd8"; depends=[bigmemory clue cluster dplyr dtw flexclust foreach ggplot2 ggrepel Matrix nloptr proxy Rcpp RcppArmadillo RcppParallel reshape2 rngtools RSpectra]; }; dualScale = derive2 { name="dualScale"; version="0.9.1"; sha256="11hqxprai0s5id6wk4n2q174r1sqx9fzw3fscvqd2cgw8cjn1iwl"; depends=[ff lattice Matrix matrixcalc vcd]; }; + dub = derive2 { name="dub"; version="0.1.0"; sha256="0sdk8sppjcfx2bsngpngm2446warsnipzzw4yz5z4jpickp52ay0"; depends=[]; }; duckduckr = derive2 { name="duckduckr"; version="1.0.0"; sha256="1wki8xvqp5hr27iafd9jbryl9faywfkdkpn0pa0afywbic39k2cm"; depends=[crul jsonlite]; }; dummies = derive2 { name="dummies"; version="1.5.6"; sha256="01f84crqx17xd6xy55qxlvsj3knm8lhw7jl26p2rh2w3y0nvqlbm"; depends=[]; }; dummy = derive2 { name="dummy"; version="0.1.3"; sha256="081a5h33gw6ym4isy91h6mcf247c2vsdygv9ll07a3mgjcjnk79p"; depends=[]; }; dunn_test = derive2 { name="dunn.test"; version="1.3.5"; sha256="0lqwvyl3pyygfc73nf81gzw3zl3w43r7ki0yw2dgrzhkpb2iji4a"; depends=[]; }; dupiR = derive2 { name="dupiR"; version="1.2"; sha256="0p649yw7iz6hnp7rqa2gk3dqkjbqx1f6fzpf1xh9088nbf3bhhz3"; depends=[plotrix]; }; dvfBm = derive2 { name="dvfBm"; version="1.0"; sha256="0gx11dxkbnh759ysd1lxdarlddgr3l5gwd5b0klwvwsgck6jv529"; depends=[wmtsa]; }; - dvmisc = derive2 { name="dvmisc"; version="1.1.1"; sha256="1lz8v1946c4nlnpcpx9lk90fjaqr1myxni700k7b30ljyns4nqn3"; depends=[MASS microbenchmark rbenchmark Rcpp]; }; + dvmisc = derive2 { name="dvmisc"; version="1.1.2"; sha256="1dy0yykskwhkql19bhzmbwsgv028afc8jh9yqwbczj6f3vpv31zh"; depends=[MASS rbenchmark Rcpp]; }; dvn = derive2 { name="dvn"; version="0.3.5"; sha256="04di2gpdacivvd9bi96w6145k280s8blavdhi1w3rw4c7sc3hag2"; depends=[RCurl XML]; }; - dwapi = derive2 { name="dwapi"; version="0.1.1"; sha256="1pr1ja7663skyr7mzvn1ap33l5xsng91xiylg02c5wdcg8clv66a"; depends=[httr readr rjson xml2]; }; + dwapi = derive2 { name="dwapi"; version="0.1.2"; sha256="09crawhd0i94h6c091w1h72nay931xadhmiiy84x4pgvvj2nq6qq"; depends=[httr readr rjson xml2]; }; dyads = derive2 { name="dyads"; version="1.1"; sha256="0jlyg4bz3zp4g5ig0swwi72bxaj85wll05h6vishnvmnprpdc96n"; depends=[MASS mvnfast]; }; dygraphs = derive2 { name="dygraphs"; version="1.1.1.4"; sha256="0vwg9q7xrwxkm92d55ik9gdky42bj3jlh6fi4jzwyl5nfdswklb9"; depends=[htmltools htmlwidgets magrittr xts zoo]; }; dyn = derive2 { name="dyn"; version="0.2-9.3"; sha256="00h75kqfpr77jhppnpxvykbdcmsmsb2vl2527xzq10wkvm7gfpvv"; depends=[zoo]; }; dynBiplotGUI = derive2 { name="dynBiplotGUI"; version="1.1.5"; sha256="0fvyn33mzjcc3sis05phc6412y25m406il2wzdfw8caa8dafj0yw"; depends=[tcltk2 tkrplot]; }; - dynCorr = derive2 { name="dynCorr"; version="1.0.0"; sha256="0qx8kwa6jnqb2qxwvhh509sylwdrv684dsjd9w13lafyjxgvdnlj"; depends=[lpridge]; }; + dynCorr = derive2 { name="dynCorr"; version="1.1.0"; sha256="0l5k764j1zhsqpgp0ndihah63hsk3zv9hviixfmh4h3i0sr0q52p"; depends=[lpridge]; }; dynOmics = derive2 { name="dynOmics"; version="1.0"; sha256="10aw362hhwqdnjf7xxzy25fdxq2zznzvg6xwvl25a9ppj76nm1rh"; depends=[ggplot2 gplots snow]; }; dynRB = derive2 { name="dynRB"; version="0.10"; sha256="0nd1z96rrd7dv1212ibf268dws64n7d9dqzgrqmzs4qz7gwwhngl"; depends=[caTools corrplot]; }; dynaTree = derive2 { name="dynaTree"; version="1.2-10"; sha256="1ng672mlv98xnsbd4xq70hxc8j158la4n63y46rw74granaz29ya"; depends=[]; }; dynamicGraph = derive2 { name="dynamicGraph"; version="0.2.2.6"; sha256="1xnsp8mr3is4yyn0pyrvqhl893gdx2y1zv8d2d55aah2xbfk0fjj"; depends=[ggm]; }; dynamicTreeCut = derive2 { name="dynamicTreeCut"; version="1.63-1"; sha256="1fadbql7g5r2vvlkr89nlrjxwp4yx4xrdqmv077qvmnx9vv0f4w3"; depends=[]; }; dynamichazard = derive2 { name="dynamichazard"; version="0.5.1"; sha256="11lx88g0rizwxa4rfmaz9b2g8p7nnzgiqz5b0gqsc4dvz92i74fg"; depends=[boot data_table Rcpp RcppArmadillo stringr survival]; }; - dynatopmodel = derive2 { name="dynatopmodel"; version="1.1"; sha256="100g131jmgb3by9j3v2n7f7jh9623vd7xf5frjkwrxvwzf0q1i3k"; depends=[deSolve lubridate maptools raster rgdal rgeos sp topmodel xts zoo]; }; + dynatopmodel = derive2 { name="dynatopmodel"; version="1.2.1"; sha256="0lpfhj69bvagqzzg2kjqvn9xx8f93ii34flrrns20z3bxla6gds9"; depends=[deSolve lubridate maptools raster rgdal rgeos sp topmodel xts zoo]; }; + dyncomp = derive2 { name="dyncomp"; version="0.0.1-5"; sha256="1626z5523s4igw55fw97lplfgg9mzf4np8imrarkligslvc5q8ip"; depends=[zoo]; }; dynetNLAResistance = derive2 { name="dynetNLAResistance"; version="0.1.0"; sha256="018y3m648ni31rlisjfnrx1d10mm48wpxanlnnxxpnqxjcywg2x8"; depends=[doParallel foreach igraph]; }; dynfrail = derive2 { name="dynfrail"; version="0.5.2"; sha256="1q7ml24j0ycy2bwpa14vl96315ni7x9rfp0qmf36w00mylgc3ry6"; depends=[dplyr magrittr Rcpp RcppArmadillo survival tibble tidyr]; }; dynia = derive2 { name="dynia"; version="0.2"; sha256="1swip4kqjln3wsa9xl0g92zklqafarva923nw7s44g4pjdy73d5l"; depends=[]; }; dynlm = derive2 { name="dynlm"; version="0.3-5"; sha256="1sjhhlvvcgmayb9dfwacv1g75c4lhbpzyczj6h7gkd19bcfbdhqp"; depends=[car lmtest zoo]; }; dynpanel = derive2 { name="dynpanel"; version="0.1.0"; sha256="073kfl5g4d7v8wd2qnpixqrxbac3cqj35z03ax2zlb8h2afa7j62"; depends=[gtools]; }; dynpred = derive2 { name="dynpred"; version="0.1.2"; sha256="111ykasaiznn3431msj4flfhmjvzq7dd1mnzn1wklc5ndix1pvf9"; depends=[survival]; }; - dynr = derive2 { name="dynr"; version="0.1.11-8"; sha256="1rnpzwzcdqvlh6h6npz7akw4dmw1r0958mk665z5cwssq4fha2dm"; depends=[ggplot2 latex2exp magrittr MASS Matrix mice numDeriv plyr Rdpack reshape2 xtable]; }; - dynsbm = derive2 { name="dynsbm"; version="0.4"; sha256="036m5gcwfcdjj5xkrbvnnx1a6i31n9j3q2mcijc7qimbld31pfj6"; depends=[RColorBrewer Rcpp riverplot]; }; + dynr = derive2 { name="dynr"; version="0.1.12-5"; sha256="1l9waqwg5mkqy8ipryickrkf141mjpzdvsc4qbw8bq4rkrgykklc"; depends=[ggplot2 latex2exp magrittr MASS Matrix mice numDeriv plyr Rdpack reshape2 xtable]; }; + dynsbm = derive2 { name="dynsbm"; version="0.5"; sha256="01vi4qzgp25l4wg2ij9pqrn775x4yj9gck0l397nwjg96pa7x2lz"; depends=[RColorBrewer Rcpp riverplot]; }; dynsim = derive2 { name="dynsim"; version="1.2.1"; sha256="0nkxn9v4f353fhcn1vsdrh29mrms10zid63b84flg3c6hvc0x4qr"; depends=[ggplot2 gridExtra MASS]; }; dynsurv = derive2 { name="dynsurv"; version="0.3-6"; sha256="12bfv6bykgsyxryydhjs89yvk7akam5gy89mzn1hv4ilrpc5mlmw"; depends=[BH ggplot2 nleqslv plyr reshape survival]; }; e1071 = derive2 { name="e1071"; version="1.6-8"; sha256="08n6i26nfckjpxjkzi8phhanc3ahsrirkv5rz38y2jcv7ds031pn"; depends=[class]; }; @@ -5643,22 +5762,24 @@ in with self; { eHOF = derive2 { name="eHOF"; version="1.8"; sha256="0g0sb98mlgvhs27s0a1x0ysj3r4p3r7i382fqzfv29kn1ayw0r5c"; depends=[lattice mgcv]; }; eLNNpaired = derive2 { name="eLNNpaired"; version="0.2.3"; sha256="08nck2p5npyw264kgcqmgx5rx7c3h9v892f90xlcd1dnb7dqlan3"; depends=[Biobase globaltest GSEAlm iCheck samr]; }; eMLEloglin = derive2 { name="eMLEloglin"; version="1.0.1"; sha256="087zw48lykls2jcsmpqd5jkrlpr0j423snp00liszjhdpdh59saq"; depends=[lpSolveAPI]; }; + ePCR = derive2 { name="ePCR"; version="0.9.9-4"; sha256="0lnkb4zffn62vbx8hh953z9zh0plj8l15cc1k3x936zblzgd226r"; depends=[Bolstad2 c060 glmnet hamlet impute MASS Matrix pracma ROCR survival timeROC]; }; eRm = derive2 { name="eRm"; version="0.15-7"; sha256="0x8cqcwgn8znd9w9vkxcacf097rziyb511wzcfmhhadidiilk0x3"; depends=[lattice MASS Matrix]; }; eVenn = derive2 { name="eVenn"; version="2.4"; sha256="1qs5qsrc89kb6w6xqc8jdxkih6h48zprvavffdqhxq4ab4i1nvbf"; depends=[]; }; eaf = derive2 { name="eaf"; version="1.07"; sha256="0310lrqfm1l0lifak7wa6xn21bzzn27kbrrx0bidj4hibwv7sa4l"; depends=[modeltools]; }; + earlyR = derive2 { name="earlyR"; version="0.0.1"; sha256="14davqhh3n5dfsddnfd79ni56bssrpwhvkqkdb77a8x9fn8w32pv"; depends=[distcrete EpiEstim epitrix]; }; earlywarnings = derive2 { name="earlywarnings"; version="1.0.59"; sha256="06j5g5lrzl4p5pb1pp79h00iqpbwralzhpzxmaiymv7j8kz87nr0"; depends=[fields ggplot2 Kendall KernSmooth lmtest moments nortest quadprog som spam tgp tseries]; }; - earth = derive2 { name="earth"; version="4.5.1"; sha256="1fkjrdlq0a8w9dvvp0akxpyg0sxrcd08qzflpxjbwd73pm1l31m5"; depends=[plotmo TeachingDemos]; }; + earth = derive2 { name="earth"; version="4.6.0"; sha256="1inpspp2giq24ypm60k297s6lfm4kxfwqrx2ycxyyl4syl1sqw4b"; depends=[plotmo TeachingDemos]; }; earthtones = derive2 { name="earthtones"; version="0.1.0"; sha256="1phl50bgd40i36fdkfs9xkqm703vgwxlnpyik6lk8ssip0m4rn9j"; depends=[ggmap]; }; easyAHP = derive2 { name="easyAHP"; version="0.1.1"; sha256="161mn90j9ph1p9277mj61hch8ndcv7k9izs32q93y5wp474gzynd"; depends=[]; }; easyDes = derive2 { name="easyDes"; version="3.0"; sha256="1z4ynd1ck2vxsshygjgnhyzg8i41kpnwsfix96nmgwm3861n0phb"; depends=[multcomp PMCMR]; }; easyNCDF = derive2 { name="easyNCDF"; version="0.0.4"; sha256="1hd7b6pdm5j41a4v0jxhbqdy2bz5gj86fsfwj0l7gg7h32d6hkhq"; depends=[abind ncdf4]; }; easyPubMed = derive2 { name="easyPubMed"; version="2.3"; sha256="148ga6flgv74sfzz5kvvnqhfdkx6zhpl6ydzcd32lz3cq24ckli9"; depends=[XML]; }; - easySdcTable = derive2 { name="easySdcTable"; version="0.3.0"; sha256="1dyj66vd1g06s2fs6xqrf7b4sr2p55azhzdjhazvkm9h8j55ai02"; depends=[sdcTable shiny SSBtools]; }; - easyVerification = derive2 { name="easyVerification"; version="0.4.3"; sha256="02f7n5iwivzbsdaj2pca0vs50zins6hapn4bn4nxg624qnrldnfy"; depends=[pbapply Rcpp SpecsVerification]; }; + easySVG = derive2 { name="easySVG"; version="0.1.0"; sha256="03gl5gl0yqgpygd4kna79wrhflbnq3zrz3iq2i8hk9xqd83mszh3"; depends=[]; }; + easySdcTable = derive2 { name="easySdcTable"; version="0.3.1"; sha256="0z0fq73m7vjc8wry633lvz58r2c6a6zz6w867hij1627c74mjhs4"; depends=[sdcTable shiny SSBtools]; }; + easyVerification = derive2 { name="easyVerification"; version="0.4.4"; sha256="08mih1arx01vj7cs1jsln644pcvslpyw1rgr6jmv2czr6xd8qb7d"; depends=[pbapply Rcpp SpecsVerification]; }; easyanova = derive2 { name="easyanova"; version="5.0"; sha256="13m4ddvl3nbh610y00nnihmag62g39v4ds7rx6lmifx4zq86mylp"; depends=[car nlme]; }; - easycsv = derive2 { name="easycsv"; version="1.0.5"; sha256="1fk7fj6y69hjgwgrfpz69jhbhz6yj5gjlrmji74h2k5qfk3fssky"; depends=[data_table]; }; + easycsv = derive2 { name="easycsv"; version="1.0.7"; sha256="03bhcylvs9q3bv4svj4mznqzv5h0m773vbikpymawk94r3gg0qaz"; depends=[data_table]; }; easyformatr = derive2 { name="easyformatr"; version="0.1.2"; sha256="0mrpd21hyafn82apclxmhs2jbd87sdw0g6lwc3h6gl5cbm213nxb"; depends=[dplyr knitr lazyeval magrittr stringi tibble tidyr]; }; - easyml = derive2 { name="easyml"; version="0.1.0"; sha256="1ngfai9i2v9hn09c7z48b43113kz2jkq7qvz22z25qdrav42hs1c"; depends=[caret corrplot darch dummies e1071 futile_logger ggplot2 glinternet glmnet nnet pbapply pbmcapply pROC randomForest scales scorer]; }; easynls = derive2 { name="easynls"; version="5.0"; sha256="1ma2q4y5dxk6q99v880vqfsgy1fha96j7pi8ch699l0pi6bx0d6c"; depends=[]; }; easypackages = derive2 { name="easypackages"; version="0.1.0"; sha256="00paxdwz4bw3imqhcsw6hj1h0gmnpishlxcj79n826vhdy23jc4y"; depends=[assertthat devtools]; }; easypower = derive2 { name="easypower"; version="1.0.1"; sha256="1vf0zv55yf96wjxja6ifdjvgc9nw0jl0hnc1ygyjd8pmwbgdz9bl"; depends=[pwr]; }; @@ -5673,11 +5794,11 @@ in with self; { ecb = derive2 { name="ecb"; version="0.2"; sha256="17hj4d48j6rran64ajzlgkgz17mab51fa3lz8rm3mw0qhahkjlmc"; depends=[curl httr rsdmx xml2]; }; ecd = derive2 { name="ecd"; version="0.9.1"; sha256="0d8mf5q6n7k5qj6kxvrb3habl0qmn2rxv814kydkrz2bg0scvm1q"; depends=[digest ggplot2 gridExtra gsl moments optimx polynom RcppFaddeeva Rmpfr RSQLite stabledist xtable xts yaml zoo]; }; ecdfHT = derive2 { name="ecdfHT"; version="0.1.1"; sha256="1n3n9n86pj8c54l3xvp7knvi0ajbnjmz9pi79p7wfq92a90fqx48"; depends=[rgl]; }; - ecespa = derive2 { name="ecespa"; version="1.1-9"; sha256="10s0p07r285kbahx9kwhhdpfi8qrrvgv10vxj08qs9l8blvpn99r"; depends=[spatstat splancs]; }; + ecespa = derive2 { name="ecespa"; version="1.1-10"; sha256="1n6wvz463w0ainn9a52arjhs5q9pwciknb5328pr6y287fwa3nnn"; depends=[spatstat]; }; echogram = derive2 { name="echogram"; version="0.1.1"; sha256="0f93s9f1ghin8129vb3bvsp7jmy2hfrx97p86hci8b2y4f7b83qh"; depends=[geosphere readHAC]; }; ecipex = derive2 { name="ecipex"; version="1.0"; sha256="0pzmrpnis52hvy80p3k60mg9xldq6fx8g9n3nnqi3z56wxmqpdv7"; depends=[CHNOSZ]; }; eclust = derive2 { name="eclust"; version="0.1.0"; sha256="01x327w02m357lngmgv3drni2s67sass25xk9vni1z434n8i4428"; depends=[caret data_table dynamicTreeCut magrittr pacman pander stringr WGCNA]; }; - ecm = derive2 { name="ecm"; version="2.0.0"; sha256="1xfcpsnimik8a2rzsywgiw4dj3r66mfcq7l79096d3zifg2vjgxc"; depends=[car]; }; + ecm = derive2 { name="ecm"; version="3.0.0"; sha256="19szjkfy2iivdw5zbag9mbk3pm7a8qb6hvg1y4jdrpf519xb4935"; depends=[car]; }; eco = derive2 { name="eco"; version="4.0-1"; sha256="08fblbr9qp2v0cp69hy68c18xjqvx0nsnx42n2vd1gc6r7apapj6"; depends=[MASS]; }; ecodist = derive2 { name="ecodist"; version="2.0.1"; sha256="04piv52b4b9rgv1gy6s3b1lzapc0rqiwp1yi7f8yzgjd9329kc5g"; depends=[]; }; ecoengine = derive2 { name="ecoengine"; version="1.11.0"; sha256="1d5x6hvqrqjj0wg07m4dbgb9ljdq73ibavzy2q5magnfn50a7rzm"; depends=[assertthat data_table dplyr httr jsonlite lubridate magrittr plyr whisker]; }; @@ -5687,30 +5808,30 @@ in with self; { ecoreg = derive2 { name="ecoreg"; version="0.2.2"; sha256="1yzyqvhshgc7ip251y7hsvip4xwf8i92bvvz84mn0mzv5b4mq3im"; depends=[]; }; ecoseries = derive2 { name="ecoseries"; version="0.1.5"; sha256="1q35hp5hl6z28hns5rnp3mjn6hqp5qh714pagw7fw4d4a6wnvacy"; depends=[magrittr RCurl readr rjson rvest tibble xml2 zoo]; }; ecosim = derive2 { name="ecosim"; version="1.3"; sha256="00arz8j2az1nn4p96pshw0p9xxq2qfgkyrf4ahvl1hp1h3k68jfn"; depends=[deSolve stoichcalc]; }; - ecospace = derive2 { name="ecospace"; version="1.2.1"; sha256="148q1pqmgsp0mjl8wpkpshkcrkm22g5qlkad1dhwyw6l7vsbpwxv"; depends=[FD]; }; + ecospace = derive2 { name="ecospace"; version="1.2.3"; sha256="1zfd1m4snpy17i751i2fgxdqxmz6xv5aa66c24wnvd8cq4i8qkm0"; depends=[FD]; }; ecospat = derive2 { name="ecospat"; version="2.2.0"; sha256="0awzhzl90j72jxp7qk5q5vqmgyccbkw2rbw0jrhjvlwkr5q9gyvx"; depends=[ade4 adehabitatHR adehabitatMA ape biomod2 classInt dismo doParallel ecodist foreach gbm gtools iterators maptools MigClim PresenceAbsence randomForest raster rms sp spatstat vegan]; }; - ecotox = derive2 { name="ecotox"; version="1.1.0"; sha256="0vgzhihxl03y7k491bvpngmjmgbilyvidka83yfrr2s3j7v97yg4"; depends=[ggplot2]; }; + ecotox = derive2 { name="ecotox"; version="1.3.0"; sha256="05k3hdz25kw28222bnlk814b2rlwq2f6b5kdqxqls9wdfvdknij3"; depends=[ggplot2]; }; ecotoxicology = derive2 { name="ecotoxicology"; version="1.0.1"; sha256="084xkr59d7x9zxmsnsyym2x8jshz6ag6rvnmhd1i6fzar8ypwccb"; depends=[]; }; ecoval = derive2 { name="ecoval"; version="1.1"; sha256="0ihig6nq3lrz6lzix92lrlzywnqkzsp5lrbccn5slhxdj5llird2"; depends=[rivernet utility]; }; - ecp = derive2 { name="ecp"; version="3.0.0"; sha256="0v07ak7fbiph058rlbhmgx0f230mnpi39ib8vx9bdzhx5g5lrp0j"; depends=[Rcpp]; }; + ecp = derive2 { name="ecp"; version="3.1.0"; sha256="0siq5acpy4wmqzm6zvpqj1m8a05hgk5jhb1clv06y40kqk5kjrap"; depends=[Rcpp]; }; ecr = derive2 { name="ecr"; version="2.1.0"; sha256="0vvkdxlcqaim9mkgwgdxrx1xhw3lshi1nxfw3kqllq14p3l6xss4"; depends=[BBmisc checkmate ggplot2 parallelMap ParamHelpers reshape2 smoof]; }; + eda4treeR = derive2 { name="eda4treeR"; version="0.2.0"; sha256="0fh6nfgvbkvjm1f0b292ggi0mr8ylq5pg2wp8cph46j8rhbgbdxz"; depends=[dae dplyr emmeans ggplot2 lme4 magrittr pbkrtest tidyverse]; }; edarf = derive2 { name="edarf"; version="1.1.1"; sha256="0f27hs7vn4v2jis3d66s48hr0ki8m8ndspcw1cwns5vjwb77iqwm"; depends=[data_table ggplot2 mmpf]; }; edcc = derive2 { name="edcc"; version="1.0-0"; sha256="036fi6mnn9480hkb378xb5jilkfvdydjmkyw4mcc9s1lz195f62w"; depends=[spc]; }; edci = derive2 { name="edci"; version="1.1-2"; sha256="10rqkimvmyb7hxp4wkpj8bq07q3yaimm058d4mmr09fw25lqyz1q"; depends=[]; }; edeR = derive2 { name="edeR"; version="1.0.0"; sha256="1dg0aqm5c4zyf015hz1hhn3m4lfvybc4gc1s7sp8jcsk46rxz0cc"; depends=[rJava rjson rJython]; }; - edeaR = derive2 { name="edeaR"; version="0.7.1"; sha256="1551hwl0gb55kkfpl990yhwa6l9hbx7a6bcggv5nkfqc66cs9rcm"; depends=[bupaR data_table dplyr ggplot2 ggthemes glue lubridate miniUI purrr shiny shinyTime tibble tidyr XML xml2]; }; + edeaR = derive2 { name="edeaR"; version="0.7.2"; sha256="0k043g2qrm58l7dvb2ylpg76wcznkr4p4vp2p3b4hhg1hzq8zccf"; depends=[bupaR data_table dplyr ggplot2 ggthemes glue lubridate miniUI purrr rlang shiny shinyTime stringr tibble tidyr]; }; edesign = derive2 { name="edesign"; version="1.0-13"; sha256="0fc3arr8x9x9kshp6jq4m4izzc5hqyn5vl0ys6x0ph92fc6mybp3"; depends=[]; }; edf = derive2 { name="edf"; version="1.0.0"; sha256="14ikm6j0ndxrk7c7lh5mbd2aci46d4j9a30mvcgnxy3kq6046a7b"; depends=[]; }; edfReader = derive2 { name="edfReader"; version="1.1.2"; sha256="02cclg549z6samhkraaknsmqvk0yxxcf4s9qpbcxb2cl9fcj1cjr"; depends=[]; }; edfun = derive2 { name="edfun"; version="0.2.0"; sha256="1wxx6bgy03z7c1d6556bbjl1cb49n2vn734fw2d5c1jk0zsh3fmz"; depends=[]; }; edgar = derive2 { name="edgar"; version="1.0.9"; sha256="1jh0aaizirj4i4kc6gq9kkpa1xdqxbjhj7fys8ap1xxxx6nfpcnf"; depends=[ggplot2 R_utils RColorBrewer tm wordcloud XML]; }; - edgarWebR = derive2 { name="edgarWebR"; version="0.2.1"; sha256="0ksfzj7yzb0jvdpmz6fcv4ii09l5sgjyfyba5692ym58c35m0l48"; depends=[httr xml2]; }; + edgarWebR = derive2 { name="edgarWebR"; version="0.3.1"; sha256="0gakrgag7rm18njhrs7bq99mv7yn7yxis9yscz88va16dqdp17l8"; depends=[httr xml2]; }; edgeCorr = derive2 { name="edgeCorr"; version="1.0"; sha256="19n67yc58ksin7xydrnfsyyw7fqawm5xli67cz4lv4wb62w6r6ld"; depends=[]; }; edgeRun = derive2 { name="edgeRun"; version="1.0.9"; sha256="0d5nc8fwlm61dbi00dwszj1zqlij4gfds3w1mpcqnnfilr2g3di1"; depends=[data_table edgeR]; }; edgebundleR = derive2 { name="edgebundleR"; version="0.1.4"; sha256="0pajr95qqppk2m4l7rfi46rll32z8a7lmq0vmb3p8n0aks5ajn1n"; depends=[htmlwidgets igraph rjson shiny]; }; editData = derive2 { name="editData"; version="0.1.2"; sha256="1ibpd2rlm6i9izyizmdhzxv8agrw920hxbin5y79cmf78rdg1sxy"; depends=[DT miniUI rstudioapi shiny tibble]; }; editrules = derive2 { name="editrules"; version="2.9.0"; sha256="14mfa8flkym2rx9n7bq9icc9fsrk3szib3amx5l0008rxll9qnxm"; depends=[igraph lpSolveAPI]; }; - edmcr = derive2 { name="edmcr"; version="0.1"; sha256="1x0l963ccamfw6m9nsbqcfm45wxmq3jpfxzxmc4gxvpz8c7yf4jh"; depends=[igraph lbfgs MASS Matrix nloptr sdpt3r truncnorm vegan]; }; edpclient = derive2 { name="edpclient"; version="0.2.0"; sha256="090yp94j3mm7g6lyc9vs8l1zhimnh9cizf55gw3g7ffqma2pl1rs"; depends=[httr ini jsonlite plyr]; }; edrGraphicalTools = derive2 { name="edrGraphicalTools"; version="2.2"; sha256="105jv2sz10xbl881lkhgmxzgmb8629mqsminhd197khrkf9nv40i"; depends=[lasso2 MASS mvtnorm rgl]; }; edstan = derive2 { name="edstan"; version="1.0.6"; sha256="1gm1rxwywigyfdlcm2yj1m9qjb4s6w7chr1ck7b32x1pdxdl3ns5"; depends=[ggplot2 rstan]; }; @@ -5721,9 +5842,10 @@ in with self; { eegkitdata = derive2 { name="eegkitdata"; version="1.0"; sha256="1krsadhamv1m8im8sa1yfl7injvrc4vv3p88ps1mpn8hibk5g51m"; depends=[]; }; eel = derive2 { name="eel"; version="1.1"; sha256="0cv6dhw57yy140g73z94g9x1s42fpyfliv9cm2z1alm7xwap1l0x"; depends=[emplik rootSolve]; }; eemR = derive2 { name="eemR"; version="0.1.5"; sha256="13c5k2si8aq2461iz9413hlqzgkb25zrdfvizzk8s2nn60npyaw9"; depends=[dplyr pracma R_matlab readr rlist stringr viridis]; }; - eeptools = derive2 { name="eeptools"; version="1.1.0"; sha256="161gxaqkab9bl915xspqrnm9r4r7ydki482s4axsb0wsqpf2jr13"; depends=[arm data_table ggplot2 maptools memisc vcd]; }; + eeptools = derive2 { name="eeptools"; version="1.1.1"; sha256="15b7rdjcl00jdb59llmgmwbxk31shayyv5skfbljwwm7vkwa22j7"; depends=[arm data_table ggplot2 maptools memisc vcd]; }; eesim = derive2 { name="eesim"; version="0.1.0"; sha256="0ljj1jp9cl0im8k7sfjd28ggj4q9a14df3554kwxkssr1vsn1wbc"; depends=[dplyr lubridate purrr viridis]; }; effectFusion = derive2 { name="effectFusion"; version="1.0"; sha256="1nx61n4lgnj6wh4arqm62p9xwxqvz4g7bs4b5k3ybkhmh6ns9v5l"; depends=[bayesm cluster ggplot2 MASS Matrix]; }; + effectR = derive2 { name="effectR"; version="1.0.0"; sha256="08r1jifrqa9fxm5jp6jsvazdpql53kpm6mj0sg70hvd8q0cilryb"; depends=[ggplot2 reshape2 seqinr shiny viridis]; }; effects = derive2 { name="effects"; version="4.0-0"; sha256="0h3247xcccanp0cp18r5k4l87i9862yjr5jc8sxcsfvjzn13xgf6"; depends=[carData colorspace lattice lme4 nnet survey]; }; efflog = derive2 { name="efflog"; version="1.0"; sha256="1sfmq7xrr6psa6hwi05m44prjcpixnrl7la03k33n0bksj8r1w6b"; depends=[]; }; effsize = derive2 { name="effsize"; version="0.7.1"; sha256="0l0ja7qcknn8r5hf7nrjk5cy0ajw0z60ggbyj8qvjzf8qah4mlss"; depends=[]; }; @@ -5733,7 +5855,7 @@ in with self; { egg = derive2 { name="egg"; version="0.2.0"; sha256="03k6xnbpakzgwlirxcvhrb10qh1pqvj9mv8rhr4snhnf753rb75j"; depends=[ggplot2 gridExtra gtable]; }; eggCounts = derive2 { name="eggCounts"; version="1.4"; sha256="04rhyfckkg3q6n6izbmhh1m6ywywvrr719isnx8qghlx774qab86"; depends=[BH boot coda lattice numbers Rcpp RcppEigen rstan StanHeaders testthat]; }; egonet = derive2 { name="egonet"; version="1.2"; sha256="1f0fbqyk2ilmhirxvf1iwgfappi5r7807ag77r89lbaf5jq8akl0"; depends=[sna]; }; - eha = derive2 { name="eha"; version="2.5.0"; sha256="0kdlpmafpxph490aiijrrmypzs6a9vhfgczgvf2ir7i0shlaky2a"; depends=[survival]; }; + eha = derive2 { name="eha"; version="2.5.1"; sha256="0www19cc80xg2hi1ibajqnp931gda9pk95cnx976lq1kpxzb2pyl"; depends=[survival]; }; ei = derive2 { name="ei"; version="1.3-3"; sha256="0i8pvpal23zwsqldhmm3iis4vw9s08mlydpshaig2dsd9549gn11"; depends=[cubature eiPack ellipse foreach MASS mnormt msm mvtnorm plotrix sp tmvtnorm ucminf]; }; eiCompare = derive2 { name="eiCompare"; version="2.1"; sha256="0kv4k1zk1gz3fapy2i2ydy0n38hy95i10r3hr3dx8mkkf3nsj46h"; depends=[cubature data_table ei eiPack ellipse foreach ggplot2 magrittr mnormt msm mvtnorm plotrix plyr R_utils stringr tidyr tmvtnorm ucminf]; }; eiPack = derive2 { name="eiPack"; version="0.1-7"; sha256="1cxk31bj012ijm85sf6l4rjrwayw94j2d6aav8p9g1f0raha2s6y"; depends=[coda MASS msm]; }; @@ -5746,20 +5868,21 @@ in with self; { elastic = derive2 { name="elastic"; version="0.8.0"; sha256="17aqf0a3spwh8k7s3kgnccbgad3sr3w63if96piygjz0lxgc7kzs"; depends=[curl httr jsonlite]; }; elasticIsing = derive2 { name="elasticIsing"; version="0.2"; sha256="1zjgvz7w5j06x2cd1fzjl85di95ah67m1lanw01kic2bvhfwfbn6"; depends=[cvTools glmnet magrittr qgraph reshape2]; }; elasticnet = derive2 { name="elasticnet"; version="1.1"; sha256="1x8rwqb275lz86vi044m1fy8xanmvs7f7irr1vczps1w45nsmqr2"; depends=[lars]; }; - elasticsearchr = derive2 { name="elasticsearchr"; version="0.2.0"; sha256="0hw2pwfh6k8q1646cprg3d84acwgw5bi7vmp7wrnxkxg7npz5pyz"; depends=[httr jsonlite]; }; + elasticsearchr = derive2 { name="elasticsearchr"; version="0.2.1"; sha256="1x20w13hkpnf1kjvml99a9q1w162f6703ccqvcqy6z0vamcvylw8"; depends=[httr jsonlite]; }; elec = derive2 { name="elec"; version="0.1.2"; sha256="0f7ahrjb52w8a8l5v00xla6z9afpz2zrckl9v04xalp34snhdwan"; depends=[]; }; elec_strat = derive2 { name="elec.strat"; version="0.1.1"; sha256="09196k5c3jsikh98d33bn70izwcbx0wb5ki9fv1ij0dw9mnv4c3p"; depends=[elec]; }; + elect = derive2 { name="elect"; version="1.1"; sha256="1lr4c08r3pc3qy7g9csppfp0m79z9b0wvk6lf5dyp1yaf9k6phk0"; depends=[msm nnet]; }; electionsBR = derive2 { name="electionsBR"; version="0.3.0"; sha256="18aq1yz2l2g4cjbmk18n5vl8x8lkp90xwm82l0bg1z1smyv3agan"; depends=[data_table dplyr haven magrittr]; }; electoral = derive2 { name="electoral"; version="0.1.0"; sha256="0y4kkxm8vmj4gsan6qyhg28b0b6hgl4fghslk21d8w5w6syln4kh"; depends=[dplyr ineq tibble]; }; - elementR = derive2 { name="elementR"; version="1.3.3"; sha256="09g6xmxgkqy9nlg9myfyhjjjh2xpxmf1k65r4327087jhh18l3in"; depends=[abind climtrends colourpicker devtools EnvStats gdata gnumeric lmtest outliers R6 reader readODS readxl shiny shinydashboard shinyjs stringr tcltk2 zoo]; }; - elevatr = derive2 { name="elevatr"; version="0.1.3"; sha256="1fs34gaak0sdxpvbgszrwd833nd03p19m6fawaard1waylxsgscg"; depends=[httr jsonlite prettyunits progress raster ratelimitr rgdal sp]; }; + elementR = derive2 { name="elementR"; version="1.3.5"; sha256="1b9f601r0gdcyclr23rf33skbbvh7lnr4nlmgcwxixkfsg8mabs9"; depends=[abind colourpicker devtools EnvStats gdata gnumeric lmtest outliers R6 reader readODS readxl shiny shinydashboard shinyjs stringr tcltk2 zoo]; }; + elevatr = derive2 { name="elevatr"; version="0.1.4"; sha256="0gxwlcfn271p8gf2iqwqbi61kcaahfdghsc0rwm3xxxysjb5a2b2"; depends=[httr jsonlite progress raster ratelimitr sp]; }; elexr = derive2 { name="elexr"; version="1.0"; sha256="1xmrzlp55z6k3psdg4a3x3rsilvq3k37v9r7ydfn80ahvqjz0fqh"; depends=[]; }; elhmc = derive2 { name="elhmc"; version="1.1.0"; sha256="0ngva7rnfj75fq93ycsv929m9ykijp48r7cvd6sfmi0sqsjinax5"; depends=[emplik MASS plyr]; }; elliplot = derive2 { name="elliplot"; version="1.1.1"; sha256="1sl85kyjpxiw0gs3syhlhfrci03fl054py7m24xln5vk07665vbp"; depends=[]; }; - ellipse = derive2 { name="ellipse"; version="0.3-8"; sha256="0ibz1qvf1qbb5sigyhpxb8hgip69z3wcimk3az1701rg2i64g3ah"; depends=[]; }; + ellipse = derive2 { name="ellipse"; version="0.4.1"; sha256="0g82vc51m3c1k0hnpp2zla6amxxgk2mmkl8ssnsc49jv3599r6hs"; depends=[]; }; elliptic = derive2 { name="elliptic"; version="1.3-7"; sha256="1bzd5x0yph76jh59ljl875grm52s8xpnmbgww1jjxx0hgkv7938g"; depends=[MASS]; }; elmNN = derive2 { name="elmNN"; version="1.0"; sha256="129r6d3qa48gqvqxks53hdmyk3jjakddsj5fwj91kqq0hkm34kyd"; depends=[MASS]; }; - elo = derive2 { name="elo"; version="1.0.0"; sha256="176d49hk2zfpnzp9kn2nsbwndqidfyw38piy8kbcdxl9bh5jwpp8"; depends=[pROC Rcpp]; }; + elo = derive2 { name="elo"; version="1.0.1"; sha256="0dhlac5l68a3jps2hx0bc7qjj8hsr1ha137hcwxnrfdwnki6chlp"; depends=[pROC Rcpp]; }; elrm = derive2 { name="elrm"; version="1.2.2"; sha256="0wz0l703v0iyp7nswdmh65n0cy3a7rfvyxd795a6nzk3nich8bfg"; depends=[coda]; }; emIRT = derive2 { name="emIRT"; version="0.0.8"; sha256="17igda5phgfapjzg7dkid5jj49gmwgpadjr27z7s21365i7md9mz"; depends=[pscl Rcpp RcppArmadillo]; }; embryogrowth = derive2 { name="embryogrowth"; version="7.1"; sha256="0gm5ww7vwc6kcv6lzrca4f9a6nkilb79d5b4kidfhwrcbfrkdb2k"; depends=[deSolve HelpersMG numDeriv optimx]; }; @@ -5770,7 +5893,7 @@ in with self; { emil = derive2 { name="emil"; version="2.2.8"; sha256="02xjf8ipqr136y3pa375lwpg6h63yvbphhghs9jjxfl2r4fdkvcn"; depends=[data_table dplyr ggplot2 lazyeval magrittr Rcpp tidyr]; }; emma = derive2 { name="emma"; version="0.1-0"; sha256="0psd8lrbcqla8mkhp0wlassaaimgwlmqy5yv2wwcq59mc5k1v27f"; depends=[clusterSim earth]; }; emme2 = derive2 { name="emme2"; version="0.9"; sha256="035s4h95ychqb14wib0dqbg4sjy9q01fsryr0ri25g1hsi5f8lpm"; depends=[reshape]; }; - emmeans = derive2 { name="emmeans"; version="0.9.1"; sha256="10rfliy3chwc4j9bcrsm5rygs8bk8nfvwvh1hdliz6glkg5rpicw"; depends=[coda estimability ggplot2 multcomp mvtnorm nlme plyr xtable]; }; + emmeans = derive2 { name="emmeans"; version="1.1"; sha256="191kxk3va7xaxf4gad3ndxck449nci45n3jxfbw68m0kwk0h97qi"; depends=[coda estimability ggplot2 multcomp mvtnorm nlme plyr xtable]; }; emoa = derive2 { name="emoa"; version="0.5-0"; sha256="1wcnsnkdmpcn21dyql5dmj728n794bmfr6g9hgh9apzbhn4cri8p"; depends=[]; }; emojifont = derive2 { name="emojifont"; version="0.5.1"; sha256="0i4id9631ah5vzkzh6zfxgk55b2ppnbgabp1w2ivy29i0nji9wk4"; depends=[ggplot2 proto showtext sysfonts]; }; emon = derive2 { name="emon"; version="1.3.2"; sha256="19khjjpyxvzhzihqq15w02l5v5ryyvxlklz1ch2gkmqcpnvyga32"; depends=[MASS mgcv]; }; @@ -5781,32 +5904,32 @@ in with self; { ems = derive2 { name="ems"; version="1.0.0"; sha256="1x6zsrf15xn865v8awbnq1cpaqp5j2k1pmis5a8mjnw568xi0hhw"; depends=[]; }; emuR = derive2 { name="emuR"; version="0.2.3"; sha256="04nxrg95qgwc5ss139bgjcsxkarwzkxy132dz0vk3sq7sddnagws"; depends=[base64enc data_table DBI dplyr httpuv jsonlite MASS RCurl RSQLite stringr uuid wrassp]; }; emulator = derive2 { name="emulator"; version="1.2-15"; sha256="1rp7q7zs8b49jzdkbzm4s1g8554h41hcabf4d78k9jhhys2z28g2"; depends=[mvtnorm]; }; - enRich = derive2 { name="enRich"; version="3.0"; sha256="1ni2hkw0pq0mjjqd11qqrc3lbzyif84ljh9zrn2yil1qk2882r1n"; depends=[]; }; enaR = derive2 { name="enaR"; version="3.0.0"; sha256="0sy7k8l6b8p34bcf9bpjr1y6qkjkvn77y2w2ws7ivcr1fynrhm5p"; depends=[gdata limSolve MASS network sna stringr]; }; enc = derive2 { name="enc"; version="0.1"; sha256="03l8zhamq243h9ghl6nwvvxigzbz4xzkbd5sqafx1rlg69ds67f0"; depends=[]; }; - encode = derive2 { name="encode"; version="0.3"; sha256="0s2xva9yadk0s9x6kiwmh6bbq79aa1zx4gb5d1m7nbp2z8x4z77i"; depends=[]; }; + encode = derive2 { name="encode"; version="0.3.3"; sha256="01jippva8gfbg3bq6g1sz8mpmglywg4mkb4k44bfspiv60bmv98f"; depends=[]; }; endogMNP = derive2 { name="endogMNP"; version="0.2-1"; sha256="0maxcp321ngbxrg0i23nlwhj849v771xahh53367x928ss4f8v7i"; depends=[]; }; endogenous = derive2 { name="endogenous"; version="1.0"; sha256="079fmfxl9gf080zq5m1ixmgry9dawg2y6ixbfyc5da5jxf3zk9h8"; depends=[mvtnorm]; }; endorse = derive2 { name="endorse"; version="1.6.0"; sha256="1j75sb2di2c092dilbjj5qsvb52h3zmm7wxflf9kg7xw227wq3zw"; depends=[coda]; }; endtoend = derive2 { name="endtoend"; version="1.0"; sha256="0x8f6h0mznmncqdwvsp2f0x524g5clgvk64qflf373lyn6h1v0ap"; depends=[]; }; energy = derive2 { name="energy"; version="1.7-2"; sha256="19c7bgjnm4ggf7w5mk64c5shkma3sa9wc8x117iqv7pk1bvvyy3p"; depends=[boot Rcpp]; }; energyr = derive2 { name="energyr"; version="0.1.1"; sha256="1mid5f8l6v55pjzfx304a303mkn9b5r3jzmjl2fi2pz4v2jsdw04"; depends=[RgoogleMaps]; }; + enetLTS = derive2 { name="enetLTS"; version="0.1.0"; sha256="0lqnhrsg9fnkn8z5crdrajpgavk1knr9z4sbdffpa6q9n8s5pmhr"; depends=[cvTools ggplot2 glmnet reshape robustHD]; }; english = derive2 { name="english"; version="1.1-2"; sha256="1wlqpl85rq49ndrfqlixayp4zzvpad0snln5qirr1i3y2q510dgx"; depends=[]; }; engsoccerdata = derive2 { name="engsoccerdata"; version="0.1.5"; sha256="06fdgjgnk4lwshrkd0jad411x5nz9sxlri9fdhxrf2dr2hik4l8q"; depends=[dplyr magrittr tidyr]; }; - enigma = derive2 { name="enigma"; version="0.3.0"; sha256="0ld3jhxrpyrhjklwif4jf1rn9ykx218pqzn9bfl0qdxr6cr4hhwy"; depends=[crul jsonlite plyr tibble xml2]; }; enpls = derive2 { name="enpls"; version="5.9"; sha256="07id08k7pg2gvlyn8vnjprpr0gnggldg9am1h62s50dw54axixwd"; depends=[doParallel foreach ggplot2 plotly pls reshape2 spls]; }; enrichR = derive2 { name="enrichR"; version="1.0"; sha256="0lfdr45sdyqhvgz8q4qdbk12mpv86d6id665kq6aaslgr8jggfmn"; depends=[httr rjson]; }; enrichvs = derive2 { name="enrichvs"; version="0.0.5"; sha256="0x91s03hz1yprddm6mqi75bm45ki3yapfrxmap7d4qc0hi06h22k"; depends=[]; }; enrichwith = derive2 { name="enrichwith"; version="0.1"; sha256="10x7p0s96hkalnnnwx2gczywblqxig9p4pllzk1ciyjjfidsc9va"; depends=[]; }; - ensembleBMA = derive2 { name="ensembleBMA"; version="5.1.4"; sha256="14zq22h8nna7j403c1x9py90fwas8fg0vq3im2zh31dyrk1j8d7k"; depends=[chron]; }; + ensembleBMA = derive2 { name="ensembleBMA"; version="5.1.5"; sha256="0p744151pbj278lyc8d8p7rc20n70abpfgxz6jr10jarmq3r6x7l"; depends=[chron]; }; + ensembleEN = derive2 { name="ensembleEN"; version="1.1.2"; sha256="033i4bcnr62kmrp1fafdw6vx8ir38kqchgxp4fidg3i750nkjnda"; depends=[Rcpp RcppArmadillo]; }; ensembleMOS = derive2 { name="ensembleMOS"; version="0.8.1"; sha256="1xbk3m4b619wni64i7wrccgp7gwaql2g6lg42lqwbsscdr3j0cls"; depends=[chron ensembleBMA evd]; }; ensembleR = derive2 { name="ensembleR"; version="0.1.0"; sha256="0xvq1jlsp7gsk46i847nfvadxwlh09gi2rgwss2wf2xmh1855ray"; depends=[caret]; }; ensemblepp = derive2 { name="ensemblepp"; version="0.1-0"; sha256="1b3rhg8mv1x3caz3xg84cwx8m88055n6yl36d9i4ws6vbj8vx68f"; depends=[]; }; ensurer = derive2 { name="ensurer"; version="1.1"; sha256="1gbbni73ayzcmzhxb88pz6xx418lqjbp37sdkggbrxcyhsxpdkid"; depends=[]; }; - entropart = derive2 { name="entropart"; version="1.4-8"; sha256="02vji9gwr8gbfcsfrlsn3jddva3bj0kmy1nq28mjl8ic25snwybf"; depends=[ade4 ape EntropyEstimation geiger vegan]; }; + entropart = derive2 { name="entropart"; version="1.5-3"; sha256="02jzcqb7sqg9fcf2vi4myki9mgdsx0jwyf535zzh124h1bwz3f3y"; depends=[ade4 ape EntropyEstimation geiger vegan]; }; entropy = derive2 { name="entropy"; version="1.2.1"; sha256="10vg4818q5g54pv2nn9x5i7pvky5nsv96syy47pz2mgqp1273cpd"; depends=[]; }; envDocument = derive2 { name="envDocument"; version="2.4.0"; sha256="0r7h9p0b0gr2l18mv1ydlamsc0iq474dfhp450mdfnw2q289mhrn"; depends=[]; }; - enveomics_R = derive2 { name="enveomics.R"; version="1.1.6"; sha256="115rqddy5llsncj5nbscan26lqr8x9fmyxxl3c8gpiyil8c266ja"; depends=[fitdistrplus investr modeest sn]; }; + enveomics_R = derive2 { name="enveomics.R"; version="1.1.7"; sha256="1mcq37i8k4s15909dln8hvc4wkjwbbjx1054grm8174vl4mhpqvq"; depends=[fitdistrplus investr modeest sn]; }; enviGCMS = derive2 { name="enviGCMS"; version="0.3.4"; sha256="1wjf1rxwzd590qsyljw1pd59kppx91m32p6nkdy4yvbnv39rk8dq"; depends=[BiocParallel genefilter limma mixtools qvalue rcdk RColorBrewer sva xcms]; }; enviPat = derive2 { name="enviPat"; version="2.2"; sha256="1cf1h4v05riivjwil4167sncdxzgxf3r4snx1imjb6s4msx67ibi"; depends=[]; }; enviPick = derive2 { name="enviPick"; version="1.5"; sha256="04q6zwqq2ip8b8h2n1jpgx1bzcvi7lazljs0806wiakbc79x232p"; depends=[readMzXmlData shiny]; }; @@ -5814,15 +5937,15 @@ in with self; { envlpaster = derive2 { name="envlpaster"; version="0.1-2"; sha256="11a5n40k1ln5gxxvwq1vh4dhmhifhlm89hkhf36qnhj4bjh3v3y0"; depends=[aster aster2 caTools MASS]; }; epade = derive2 { name="epade"; version="0.3.8"; sha256="1alvsifc6i71ilm1xxs1d7sqlapb48bqd6z2n4wi6pqcjvwp7bif"; depends=[plotrix]; }; epandist = derive2 { name="epandist"; version="1.1.1"; sha256="0hxgbjns5bk82rgcmykxifnnxcnqdzmkimkkmpdif64zr5g3gjdg"; depends=[]; }; - epanet2toolkit = derive2 { name="epanet2toolkit"; version="0.1.3"; sha256="1s10qkvfn9i4ddwqnfwv9fqdv2860vfhb9nha09cjglf9iqss7lx"; depends=[]; }; - epanetReader = derive2 { name="epanetReader"; version="0.5.1"; sha256="19w4cckdhc8qjvncymznd9jnwj16gklpp2fb96x4rf9qnmh8zdvq"; depends=[]; }; + epanet2toolkit = derive2 { name="epanet2toolkit"; version="0.2.1"; sha256="18drz4pi2mqqwp2ji3a8k6mxh04n8yrwggf2p1k7bg3jchgh0kx3"; depends=[]; }; + epanetReader = derive2 { name="epanetReader"; version="0.6.2"; sha256="0xj56ykfrm7m2r0rr4abgv6ip40nc2j1byxhmi7m97b2q953akld"; depends=[]; }; epiDisplay = derive2 { name="epiDisplay"; version="3.2.2.0"; sha256="1f9kifjgdwxs7c236nsr369ij71rj7l5ady88h4n5p5pjw2h451a"; depends=[foreign MASS nnet survival]; }; - epiR = derive2 { name="epiR"; version="0.9-91"; sha256="1z83kvfwjj1crla322vrjj3zzadqmfy4yzhgmdwasjxl7yi2a28x"; depends=[BiasedUrn survival]; }; + epiR = derive2 { name="epiR"; version="0.9-93"; sha256="1i0vi1dx5pjq4rcw8r9g7qkhrn4ra8lffrspzkrrjj12y97izmrg"; depends=[BiasedUrn survival]; }; epibasix = derive2 { name="epibasix"; version="1.3"; sha256="0d0087sa8lqw35pn7gdg2qqzw3dvz57sgavymwl1ybcj5d4lsbyk"; depends=[]; }; epicontacts = derive2 { name="epicontacts"; version="1.1.0"; sha256="0f4a1y311z3fxw7ygj6fgsq6d2qn0ivxsjlh742pkmg3jb63s0f3"; depends=[colorspace dplyr igraph magrittr threejs visNetwork]; }; epidata = derive2 { name="epidata"; version="0.1.0"; sha256="1lp6hnjzga787abq94k8v48wlikpp5hj1xwmxc8nj1imyr4r8a4h"; depends=[dplyr httr jsonlite purrr readr rvest stringi tidyr xml2]; }; epifit = derive2 { name="epifit"; version="0.1.2"; sha256="1i1ngb5kh03gyx1702fwav3dc3mqry1wjzc7ry36hdw0ngawid34"; depends=[MASS]; }; - epinet = derive2 { name="epinet"; version="2.1.7"; sha256="10mqc3xy24mjbk9np5mp41216hj6yc9jqxl3ybgysmd80y3qgf39"; depends=[network]; }; + epinet = derive2 { name="epinet"; version="2.1.8"; sha256="10bgq66n99kkz0nhmsz508aypxk57zk19p5l3xrb28n72k4rfgrf"; depends=[network]; }; episensr = derive2 { name="episensr"; version="0.9.2"; sha256="1w1228q8q2ysi3xi3m8a9z0c7japj97dssjkzpjcrng094cy82is"; depends=[actuar boot ggplot2 gridExtra llogistic logitnorm plyr reshape trapezoid triangle]; }; episheet = derive2 { name="episheet"; version="0.2.0"; sha256="15c4xbam9b60xkkgmbswj4raln49hk43pxp2l75a7j1wykgkif95"; depends=[dplyr ggplot2 magrittr tidyr]; }; episode = derive2 { name="episode"; version="1.0.0"; sha256="1djk36jkvr8xvhfddqg6xsmhxc3yrgivkm8g2hr4n1qixsk1ad8m"; depends=[glmnet Matrix nnls Rcpp RcppArmadillo]; }; @@ -5831,14 +5954,14 @@ in with self; { epitab = derive2 { name="epitab"; version="0.2.1"; sha256="0q8fxxx7ddzaj8dxxlsh1a2gxf6byw5041mr7abac9yjjga2kz97"; depends=[kableExtra knitr MASS survival xml2]; }; epitable = derive2 { name="epitable"; version="0.1.2"; sha256="1g0ab5bah7v52mzsyfxdv8azmpz66pipbc15q3vpvvhl3gjhsaik"; depends=[broom dplyr htmlTable magrittr purrr readr rlang stringr survival tidyr tidyverse]; }; epitools = derive2 { name="epitools"; version="0.5-10"; sha256="1qqa2kam3j3mkbgk62g6lwygk2fkdlrpbi27wl37j4dkdkvx013m"; depends=[]; }; - epitrix = derive2 { name="epitrix"; version="0.1.0"; sha256="0ndirphkpzjlz9pi7r628if1fb4q8wjyn5dydwqpyr6dwp1i6rqv"; depends=[digest distcrete stringi]; }; + epitrix = derive2 { name="epitrix"; version="0.1.1"; sha256="1qskgwfh5l3v5pysbs1na0ahfc3qklls8fg9fp0yc0rizym6avhr"; depends=[digest distcrete stringi]; }; eply = derive2 { name="eply"; version="0.1.0"; sha256="18q40n06gbqg5cs0jknlxk5x0pwcbjnfb27ysmbf76s826qdc8gh"; depends=[magrittr]; }; epoc = derive2 { name="epoc"; version="0.2.5-1"; sha256="1r19cvcqf39yf09n3znbdy3dsr7z96yx6zib6031mqqdsxaav5qd"; depends=[elasticnet graph irr lassoshooting Matrix Rgraphviz survival]; }; epr = derive2 { name="epr"; version="3.0"; sha256="0czfz6qkcpa2qqs3pqii27hgpdvdzfrvxl0ip67v58hamq7kvjfv"; depends=[car lme4]; }; epxToR = derive2 { name="epxToR"; version="0.3-0"; sha256="0ckz7cvqsdilfkqap88brh4av9zv1fl3ijs4h4vlwwn7qvdcnhay"; depends=[httr XML]; }; eqs2lavaan = derive2 { name="eqs2lavaan"; version="3.0"; sha256="1lj6jwkfd84h9ldb6l74lrx2pnsl1c0d7mnrcrjkska87djb2nzd"; depends=[lavaan stringr]; }; eqtl = derive2 { name="eqtl"; version="1.1-7"; sha256="0xfr8344irhzyxs9flnqn4avk3iv1scqhzac5c2ppmzqhb398azr"; depends=[qtl]; }; - equSA = derive2 { name="equSA"; version="1.1.3"; sha256="16kc07wddcyl060sqrzppgp7rjqn9109j0h7979cjnw8szspib0l"; depends=[huge igraph mvtnorm speedglm XMRF ZIM]; }; + equSA = derive2 { name="equSA"; version="1.1.5"; sha256="0sknx2p820i26m1d0ypz4ay5rm4j9i97nvcd3wxawqk72ypvbvw1"; depends=[huge igraph mvtnorm speedglm XMRF ZIM]; }; equaltestMI = derive2 { name="equaltestMI"; version="0.1.0"; sha256="1zqhgx1x6lqjwqisl3ydb6yqp3jn6x7dgnc57r93v73sjx2j5aiz"; depends=[lavaan]; }; equate = derive2 { name="equate"; version="2.0.6"; sha256="0fkgz4747wf2n1sfkskpbp20zdmxvykqhncr7a8wl5lp314r48x3"; depends=[]; }; equateIRT = derive2 { name="equateIRT"; version="2.0-4"; sha256="0j5dpgp4r5qisgw65yk7x9nwq7wxfppp0n0qqg734gqwjyfyp68b"; depends=[mirt statmod]; }; @@ -5858,6 +5981,7 @@ in with self; { erp_easy = derive2 { name="erp.easy"; version="1.1.0"; sha256="193n45w0rq3cy0nmxvv0h6s3yr8kfjlg90nd4dnqlsq85zlsizij"; depends=[gtools plyr signal]; }; erpR = derive2 { name="erpR"; version="0.2.0"; sha256="1y6abc5fkcyyjh36maj1zbxppqzwd5wkvzvqahyvzsz5fqpjkcdx"; depends=[rpanel]; }; errint = derive2 { name="errint"; version="1.0"; sha256="1ya7fsvwhmgxw87r32m4345n8pw2pbpv026xvml03s1kiam8qwbw"; depends=[rootSolve VGAM]; }; + errorist = derive2 { name="errorist"; version="0.0.1"; sha256="1569yvncc9rdzchs7cvx44dhy8xf10g2hwkiy3kp68h47qghxlbd"; depends=[searcher]; }; errorizer = derive2 { name="errorizer"; version="0.2.1"; sha256="10p7ydm81x2gls0wn692llgj2rxhg4s96rv7gvihmgi5dflraypq"; depends=[]; }; errorlocate = derive2 { name="errorlocate"; version="0.1.2"; sha256="1qlwdvy7i62hpnfrryzmqwmygxa8mjc7q92g6k5n9r2r179q7h09"; depends=[lpSolveAPI validate]; }; errors = derive2 { name="errors"; version="0.2.0"; sha256="0l7yxshfc2ig7354r3vk35fsx2vyj09w7abwxakic93grvr09a71"; depends=[]; }; @@ -5866,24 +5990,28 @@ in with self; { esc = derive2 { name="esc"; version="0.4.0"; sha256="07mgf1kdz6gjkmbsis24gjsppclaxlf7b03jpvasm1k4snfvgb5h"; depends=[dplyr purrr readr sjmisc tibble]; }; eshrink = derive2 { name="eshrink"; version="0.1.0"; sha256="0s1jl652za7qwv70kmc1h3vbwlijl49527pwpm0z347lz2jdcigj"; depends=[glmnet MASS]; }; esmisc = derive2 { name="esmisc"; version="0.0.3"; sha256="1d6xrdxwn85c8s60s7vzaymh7wa9f7fzd79hq5spzd12fr3zisvj"; depends=[ggplot2 raster readr]; }; - esmprep = derive2 { name="esmprep"; version="0.1.0"; sha256="0yv73czpvl6xdwwcxgssm6yw33lr3s27v4r67gcbslnidhcbq192"; depends=[lubridate]; }; + esmprep = derive2 { name="esmprep"; version="0.1.3"; sha256="0s5ij63v3v9hx1xnl8ygbnxbgik65yd8xn3irpbvc41mp9spgcdz"; depends=[lubridate]; }; esreg = derive2 { name="esreg"; version="0.3.1"; sha256="19ikfy0g8yd224ah4gyq2k29lz3gagc6vrcv53awvdadqw0cpz8l"; depends=[quantreg Rcpp RcppArmadillo]; }; ess = derive2 { name="ess"; version="0.0.1"; sha256="1696rps3abznfb1bvyp1pymw0p48f13lw9wfqdiy049wh4kqm96l"; depends=[haven httr stringr XML xml2]; }; + essHist = derive2 { name="essHist"; version="1.0.1"; sha256="0xnf5cxc7x3chs508am9qhnavz89fim10ffkn8mp1b29jdw88aax"; depends=[Rcpp]; }; estatapi = derive2 { name="estatapi"; version="0.3.0"; sha256="0gjc5x1b2l5qnwdg77nzy6d7bf9q93ll39sfy89izqm8wsydwwkp"; depends=[dplyr httr purrr readr]; }; - estimability = derive2 { name="estimability"; version="1.2"; sha256="13b80bpnbrarazjvnpnk91ljjsqgfm2fm3gy66aj09cmmsmv199h"; depends=[]; }; + estimability = derive2 { name="estimability"; version="1.3"; sha256="0cifdaa71spkcxl4db4z884jrya865sg3dhcv4isd8fnzg2pjcd3"; depends=[]; }; + estimatr = derive2 { name="estimatr"; version="0.4.0"; sha256="19k8b4rglz4b7r12x8da6wzrkd0j40dp1zxzdwj6pfw3fhpacl2i"; depends=[Rcpp RcppEigen]; }; estout = derive2 { name="estout"; version="1.2"; sha256="0whrwlh4kzyip45s4zifj64mgsbnrllpvphs6i5csb7hi3mdb3i5"; depends=[]; }; estprod = derive2 { name="estprod"; version="0.0.1"; sha256="0nd2iz1gqinvppyxgxsdh9m26v46h2ra3cc4nqz6dqnqkslzrl4k"; depends=[boot Formula lazyeval minpack_lm]; }; + estudy2 = derive2 { name="estudy2"; version="0.8.4"; sha256="190wxdy1qsf8fgpbp2cr0blwa97vgmdw83pmfk9i44zkpm4nrij1"; depends=[matrixStats Rcpp tseries zoo]; }; esvis = derive2 { name="esvis"; version="0.1.0"; sha256="19avayz2igw8sjc2743a9c3ikyrf18d42czadd98gdn8ny53vr6b"; depends=[sfsmisc]; }; etable = derive2 { name="etable"; version="1.2.0"; sha256="17xahaf2fz1qgqjaw8qbnss95il6g47m3w00yqc5nkvv37gs0q7c"; depends=[Hmisc xtable]; }; etasFLP = derive2 { name="etasFLP"; version="1.4.0"; sha256="04d526yajakzivlcsz8631p0j482cbbgfpdmzkc9zr1m4495xxif"; depends=[fields mapdata maps rgl]; }; + ether = derive2 { name="ether"; version="0.1.4"; sha256="1q6qxda5iw8zj7gy9h35apij5mbndd969ddip7zn5d720131kqra"; depends=[dplyr httr jsonlite Rmpfr]; }; etl = derive2 { name="etl"; version="0.3.7"; sha256="045hkh95ki3s10l9mz4710ws2i9and4rqb0qk1c5sfslglc0riq5"; depends=[DBI downloader dplyr lubridate readr rlang rvest stringr tibble xml2]; }; etm = derive2 { name="etm"; version="0.6-2"; sha256="0sdsm6h502bkrxc9admshkrkqjczivh3av55sha7542pr6nhl085"; depends=[lattice survival]; }; etma = derive2 { name="etma"; version="1.1-1"; sha256="0g9244yx50y1gw0f37hskbcgyv4nldmzr86v3rmf3afabmjbyzjj"; depends=[]; }; etrunct = derive2 { name="etrunct"; version="0.1"; sha256="0ayazgyqlc8jcqr03cwfmfhm4pck6xri1r6vkgqy4arqkrrnrcqr"; depends=[]; }; etseed = derive2 { name="etseed"; version="0.1.0"; sha256="1kqbhvryqzmckk91ynn68yd7msqdsl6h818r164180f10flszr37"; depends=[httr jsonlite R6]; }; eulerian = derive2 { name="eulerian"; version="1.0"; sha256="0yhpnx9vnfly14vn1c2z009m7yipv0j59j3s826vgpczax6b48m0"; depends=[graph]; }; - eulerr = derive2 { name="eulerr"; version="3.0.1"; sha256="0ag2dviqnkzi1ypkiyy9nz7hbyrf3yywpx5pafprirdwnw7b94hi"; depends=[GenSA lattice Rcpp RcppArmadillo]; }; - europepmc = derive2 { name="europepmc"; version="0.1.4"; sha256="0kh61jmr2y0wjqch0jzk594anpwq56x9lhx6sx54y2pqjqw68b0i"; depends=[dplyr httr jsonlite plyr urltools xml2]; }; + eulerr = derive2 { name="eulerr"; version="4.0.0"; sha256="1zjqzlr67qihvh7v66rggz8khf6f11wqw2cvxjvg07qmh3xk7sf5"; depends=[lattice polyclip Rcpp RcppArmadillo RcppDE]; }; + europepmc = derive2 { name="europepmc"; version="0.2"; sha256="1kh1mma21jjwlwxq2h3l5klzlgy98zsryhs1si9z5cfx48lszxdb"; depends=[dplyr httr jsonlite plyr progress urltools xml2]; }; europop = derive2 { name="europop"; version="0.3.1"; sha256="1ym257bxr4a0dmln1j8x3pf87wrryzgqyzhvk61whc6n2bj62x1s"; depends=[]; }; eurostat = derive2 { name="eurostat"; version="3.1.5"; sha256="128rlkkxdpl95wjxnrw8yzxpc6sml0vaghnaz0ra90ak1s43ndda"; depends=[classInt httr jsonlite RColorBrewer readr sp stringi stringr tibble tidyr]; }; eva = derive2 { name="eva"; version="0.2.4"; sha256="03jsiz6bkavwxpgllxaw8czahmm2rh5h8hhk5j7i9clcjx244vvj"; depends=[EnvStats Matrix]; }; @@ -5895,36 +6023,35 @@ in with self; { evdbayes = derive2 { name="evdbayes"; version="1.1-1"; sha256="0lfjfkvswnw3mqcjsamxnl8hpvz08rba05xcg0r47h5vkgpw5lgd"; depends=[]; }; event = derive2 { name="event"; version="1.1.0"; sha256="1nq34bz9dsixidym3n255vmap3gjx9nfk8pc5s7w026faf96dr2v"; depends=[rmutil]; }; eventInterval = derive2 { name="eventInterval"; version="1.3"; sha256="0nybzy2mpmazcvz06mkv7l9741mjm3i2q2sindq0777vb2k4504v"; depends=[MASS]; }; - eventdataR = derive2 { name="eventdataR"; version="0.1.1"; sha256="1vabawwb41v3gs7x3s1w8nll02h544xbsr21c2wbdx9h304rs54m"; depends=[]; }; + eventdataR = derive2 { name="eventdataR"; version="0.1.2"; sha256="0f0w5cir3hc01ag9l69y27cfp6bgh1ikk4n99z7pb16373ficjjw"; depends=[]; }; events = derive2 { name="events"; version="0.5"; sha256="1zka4ygymifs8snd7cabl11b5lg3f8g8370dkm9ybl40bn8vvqq2"; depends=[]; }; eventstudies = derive2 { name="eventstudies"; version="1.2"; sha256="0z449j7yrd6j6hhacz6f048ibilib6m97684cz2wc4pqq2wlj8hg"; depends=[boot sandwich testthat xts zoo]; }; evidenceFactors = derive2 { name="evidenceFactors"; version="1.00"; sha256="12wndimbygn7h57f3q0xmxmvqrcdj98f0a58m22z2l0vmym53rhb"; depends=[sensitivitymv]; }; evir = derive2 { name="evir"; version="1.7-3"; sha256="1kn139vvzdrx5r9jayjb4b0803b0bbppxk68z00gdb50mxgvi593"; depends=[]; }; - evmix = derive2 { name="evmix"; version="2.7"; sha256="0x3m4lwpwcavr950q66p7bkimshnvav4842dr505g5rc9vkw9xxg"; depends=[gsl MASS SparseM]; }; + evmix = derive2 { name="evmix"; version="2.9"; sha256="1w1mm858515hnjpq2yjj0x05skyprhnvbpyif4mdcm24blyb81di"; depends=[gsl MASS SparseM]; }; evobiR = derive2 { name="evobiR"; version="1.1"; sha256="0502xj1gv2g943vfqyllz4sr5z4mixf5vqlqi2v96mymnv9iwsr8"; depends=[ape geiger phytools seqinr shiny]; }; evolqg = derive2 { name="evolqg"; version="0.2-5"; sha256="11n0gxkxhg1d2ziwbipqvyccgnsrzm3mk4xy2d7nxn662q1yl2ah"; depends=[ape coda expm ggplot2 igraph Matrix matrixcalc MCMCpack mvtnorm plyr Rcpp RcppArmadillo reshape2 vegan]; }; evolvability = derive2 { name="evolvability"; version="1.1.0"; sha256="0lbyidb86yzvcfw86jfwnzbpijn64jr8fasycqq4h3r9c0x2by3j"; depends=[coda]; }; evoper = derive2 { name="evoper"; version="0.4.0"; sha256="11l55jj7f4ggwvimvl3d2sv2nyds29bl4dai6ycpgnff7wwdv43g"; depends=[boot deSolve futile_logger ggplot2 plot3D plyr reshape rrepast]; }; evt0 = derive2 { name="evt0"; version="1.1-3"; sha256="08sbyvx49kp3jsyki60gbbnci26d6yk0yj2zcl4bhfac8c3mm6ya"; depends=[evd]; }; - evtree = derive2 { name="evtree"; version="1.0-5"; sha256="06afqr0gsyh80f2j56vl4cbjsz5gpywri87ykfmf1wxls7jqxqac"; depends=[partykit]; }; - ewoc = derive2 { name="ewoc"; version="0.1.0"; sha256="15y4w8wpggkhf5cy24kgkf9xnig9a9lzszz31pc46ii5i5cwvj0v"; depends=[coda Formula ggplot2 rjags]; }; + evtree = derive2 { name="evtree"; version="1.0-6"; sha256="0nvk78haghvp6vw6936di0bd5gfv603nxzgw3i647i68291wav0f"; depends=[partykit]; }; + ewoc = derive2 { name="ewoc"; version="0.2.0"; sha256="0kanx14fhcbqz6gpyj7628vgy9fwz3ji5mkd4107b8pgpz2hkg00"; depends=[coda doParallel foreach Formula ggplot2 rjags]; }; exCon = derive2 { name="exCon"; version="0.2.5"; sha256="0gqnv01dw4ncf3x3p74pc6f14a1ixq7icl2p18hsmvxdqqg7kgy7"; depends=[jsonlite]; }; exact2x2 = derive2 { name="exact2x2"; version="1.5.2"; sha256="12m3kaxdrf4bsw7lrylk15nimhy4sgmjbnlqm684y2kyvii9yrg0"; depends=[exactci ssanv]; }; exactLoglinTest = derive2 { name="exactLoglinTest"; version="1.4.2"; sha256="0j146ih9szzks9r45vq1jf47hrwjq081q1nsja5h1gpllks8217h"; depends=[]; }; exactRankTests = derive2 { name="exactRankTests"; version="0.8-29"; sha256="0sj4bf0sab2rsgh967i5jl7ml2l1niydqmyn7c6ybai1gavsdpi1"; depends=[]; }; exactci = derive2 { name="exactci"; version="1.3-3"; sha256="03r35f6dyrck5pf43ypb1sjwfnvkhjkm1mbms3wh67ayfs2ypn0s"; depends=[ssanv]; }; exactmeta = derive2 { name="exactmeta"; version="1.0-2"; sha256="1v807ns799qajffky4k18iah0s3qh2ava6sz5i85hwx9dhkz19h4"; depends=[]; }; - exampletestr = derive2 { name="exampletestr"; version="1.0.1"; sha256="0352rv81isk820srwfpz7bf3349fpbygbq06lmjz8qgjvdfl1r4i"; depends=[devtools filesstrings formatR magrittr purrr roxygen2 stringr]; }; + exampletestr = derive2 { name="exampletestr"; version="1.2.0"; sha256="05p819a6s6anxjqvs10df9kcfdg7lkg1205iw635db9g6biplrb7"; depends=[checkmate devtools filesstrings magrittr purrr readr roxygen2 stringr styler]; }; exams = derive2 { name="exams"; version="2.3-0"; sha256="0y21cx6knx253gka1bib8z0jmyndl4k7c2d8hfh3rwn5bdqyqj53"; depends=[]; }; - excerptr = derive2 { name="excerptr"; version="1.3.1"; sha256="0z1qgivk4plfap9j1fllx6wdj6z4nyblgj0rqjvgalk1sjk9b5zl"; depends=[git2r rprojroot rPython]; }; - excursions = derive2 { name="excursions"; version="2.2.2"; sha256="1f6vvv33205lj6hsmmhx3q82mkhh0shzyk5hrwzf2nh1cn61w1x0"; depends=[Matrix sp]; }; + excerptr = derive2 { name="excerptr"; version="1.4.0"; sha256="0z69lqfdm2dh9z6rqhfnj6f4b2p6sgmlvcxasg49wd0qasx86ph6"; depends=[git2r rprojroot rPython]; }; + excursions = derive2 { name="excursions"; version="2.3.2"; sha256="1fh04kkv9nj7wxrklpapsfh0xi8k5hfaa1f4dvnz2wxvzz3iz5nb"; depends=[Matrix sp]; }; exif = derive2 { name="exif"; version="0.1.0"; sha256="12phqn5x1x0xs2xczl3064q983dalm261vqpyafhdcndm1y3gwbc"; depends=[Rcpp]; }; exifr = derive2 { name="exifr"; version="0.2.1"; sha256="0969ip7vwhs3r9zwy5l1gqg886yl4gfw8ss2frnq9nmqpn1ib1v2"; depends=[curl dplyr jsonlite purrr tibble]; }; exp2flux = derive2 { name="exp2flux"; version="0.1"; sha256="1b3ychb4wcf6dbccx2ddms5xygdgc296cnw4474fm81yrfjznplv"; depends=[gage igraph sybil]; }; expandFunctions = derive2 { name="expandFunctions"; version="0.1.0"; sha256="0661l4ab0xhjidmh8ycvymhp3wgxafm7nd1c59bfpxhyhz76n1p4"; depends=[glmnet orthopolynom plyr polynom]; }; expands = derive2 { name="expands"; version="2.0.0"; sha256="1ai269sic10hzw70whwv477yfgx5nhz4m06dfg373jp6i7vi5p9x"; depends=[ape flexmix matlab moments rJava]; }; - expectreg = derive2 { name="expectreg"; version="0.39"; sha256="1mxhv6phc3lgp0zz20wszx4nr3by9p6492wcb0x8wn8p8p1sy1b3"; depends=[BayesX mboost quadprog]; }; - experiment = derive2 { name="experiment"; version="1.1-1"; sha256="07yaf5k5fpymz2yvr52zbbi60g0v84qryvqqjq3sjq2mb1fjfz1p"; depends=[boot MASS]; }; + experiment = derive2 { name="experiment"; version="1.1-2"; sha256="1wswfxfk3b5gvdxb6i3mzx66i1qszvb9alfwhv95y0dr5q6vss1w"; depends=[boot MASS]; }; expert = derive2 { name="expert"; version="1.0-0"; sha256="0y9vcigvzhymalpv31b9nvmr86z1dz7x29yj838vks0dsv23rgrf"; depends=[]; }; expint = derive2 { name="expint"; version="0.1-4"; sha256="17vp7znbxlf5zb944snmnml2w42avj9k70fisb8az047i3kdbvfh"; depends=[]; }; explor = derive2 { name="explor"; version="0.3.3"; sha256="1b3swb7ikp2ik3300ljg2rll5gka4l4lfg95bqbgap3ph4dclv7y"; depends=[dplyr DT ggplot2 highr scatterD3 shiny tidyr]; }; @@ -5933,9 +6060,9 @@ in with self; { expoRkit = derive2 { name="expoRkit"; version="0.9"; sha256="0raf0m2nfbdbd1pc4lincyp8y8lgn3bfi4hn0p04plc5p40l1gvc"; depends=[Matrix SparseM]; }; expoTree = derive2 { name="expoTree"; version="1.0.1"; sha256="0hj1x4niqp0ghqik3mz733nc3zpnhyknrdpzpj6y2rfia2ysdiz8"; depends=[ape deSolve]; }; expp = derive2 { name="expp"; version="1.1"; sha256="13zbhkkcshqrpln5gsa051d390q9ij97lawsdbd5j7fj9hxm9pwh"; depends=[deldir rgeos sp spdep]; }; - exprso = derive2 { name="exprso"; version="0.2.0"; sha256="1kzlb7h868s99n7vbqcy0ddc2r72p9jj3jbi2wmkbr81cz8q4414"; depends=[cluster e1071 kernlab lattice magrittr MASS nnet plyr randomForest ROCR sampling]; }; + exprso = derive2 { name="exprso"; version="0.2.7"; sha256="0s8vf1rn7mwsiypd3k8diki5brlx95rzsqikprg9j9difv03f976"; depends=[cluster e1071 kernlab lattice MASS nnet plyr randomForest ROCR sampling]; }; expsmooth = derive2 { name="expsmooth"; version="2.3"; sha256="0alqg777g7zzbjbg86f00p2jzzlp4zyswpbif7ndd0zr8xis6zdc"; depends=[forecast]; }; - expss = derive2 { name="expss"; version="0.8.3"; sha256="0y0z289wfskd66cfzdishhvydbggi28smc616hp7r31p792shng0"; depends=[data_table DT foreign htmlTable htmltools magrittr matrixStats]; }; + expss = derive2 { name="expss"; version="0.8.6"; sha256="0yzbgmqblbxk494yhrs3mnr2jgsxvybamdbwc5w2w389baa78wny"; depends=[data_table foreign htmlTable magrittr matrixStats]; }; exptest = derive2 { name="exptest"; version="1.2"; sha256="0wgjg62rjhnr206hkg5h2923q8dq151wyv54pi369hzy3lp8qrvq"; depends=[]; }; exreport = derive2 { name="exreport"; version="0.4.1"; sha256="0vj60rchhrc5q6x1kv7b95fcmh2a5qynli2w54rrrw1nx54xm8c2"; depends=[ggplot2 reshape2]; }; exsic = derive2 { name="exsic"; version="1.1.1"; sha256="1k6nqs9i4iivxnk4nkimp6zvdly274wibkmx9n0wz01gnzxqil0p"; depends=[markdown stringr]; }; @@ -5946,7 +6073,7 @@ in with self; { extfunnel = derive2 { name="extfunnel"; version="1.3"; sha256="162w5b2wjs3yqy8jisamsapav6swa8sskf1b6x5hglnrv3i4qyyy"; depends=[rmeta]; }; extlasso = derive2 { name="extlasso"; version="0.2"; sha256="05774y0i01lrbyws6zx5ymhcglllv1wc7gzrnyx8i5d1lxdinsyd"; depends=[]; }; extraBinomial = derive2 { name="extraBinomial"; version="2.1"; sha256="0qmvl35f7n78kghszwyaz4wzbswqy4p98c3b6alzrc2ldsq6pq5z"; depends=[]; }; - extraDistr = derive2 { name="extraDistr"; version="1.8.7"; sha256="1r90q14snx6h665qkij1lza2bs87iw61y6waabdzw6p3cqgg4pds"; depends=[Rcpp]; }; + extraDistr = derive2 { name="extraDistr"; version="1.8.8"; sha256="0ywn4qwnamv36l1hw27l9y5kh3v6ha5781wsv2bz6szqjgg7kdb3"; depends=[Rcpp]; }; extraTrees = derive2 { name="extraTrees"; version="1.0.5"; sha256="1rvvp2p9j8ih8fid1n17606pa23bjg3i2659w1l6w0jkb1p23zcx"; depends=[rJava]; }; extracat = derive2 { name="extracat"; version="1.7-4"; sha256="1dply8sx9r9vshi5dycxs7bchf5g33qbq7w6i5w830glfy0lk3i5"; depends=[colorspace data_table ggplot2 hexbin plyr reshape2 scales TSP]; }; extrafont = derive2 { name="extrafont"; version="0.17"; sha256="0b9k2n9sk23bh45hjgnkxpjyvpdrz1hx7kmxvmb4nhlhm1wpsv9g"; depends=[extrafontdb Rttf2pt1]; }; @@ -5957,7 +6084,7 @@ in with self; { extremogram = derive2 { name="extremogram"; version="1.0.2"; sha256="13k869v6j4ik9p8w0gf1absvb45xbd3nnwghsz0ix7y0vyvry358"; depends=[boot MASS]; }; eyelinker = derive2 { name="eyelinker"; version="0.1"; sha256="1lwpm247czqm26zvv5c6lkhdxpp4svszfw74g9ys9vwvwhry9c15"; depends=[intervals magrittr plyr readr stringi stringr]; }; eyetracking = derive2 { name="eyetracking"; version="1.1"; sha256="0ajas96s25hjp3yrg42hp78qjhl1aih04mjirkskx32qsyq5hfpv"; depends=[]; }; - eyetrackingR = derive2 { name="eyetrackingR"; version="0.1.6"; sha256="0azfakn5kh80bvywqf52wy3c0q5k13zcasniggjf273f5z1415pn"; depends=[broom dplyr ggplot2 lazyeval tidyr zoo]; }; + eyetrackingR = derive2 { name="eyetrackingR"; version="0.1.7"; sha256="1an39l4bkbw7s75y1pjgdwhixshdaawpy4kwyaqk7jkhhy7nl1nh"; depends=[broom dplyr ggplot2 lazyeval purrr tidyr zoo]; }; ez = derive2 { name="ez"; version="4.4-0"; sha256="0a58s94x576dfz7wcbivrr2hmdh5x1vy16zwkqp9fmdzqx38pagq"; depends=[car ggplot2 lme4 MASS Matrix mgcv plyr reshape2 scales stringr]; }; ezec = derive2 { name="ezec"; version="1.0.1"; sha256="0lpx55a8fhy6fqdv3zvzx9mh75q34r71v5kp96hkm9jzl4yvrpd2"; depends=[dplyr drc]; }; ezglm = derive2 { name="ezglm"; version="1.0"; sha256="0x7ffk3ipzbdr9ddqzv0skmpj5zwazkabibhs74faxnld7pcxhps"; depends=[]; }; @@ -5973,7 +6100,7 @@ in with self; { fCertificates = derive2 { name="fCertificates"; version="0.5-4"; sha256="1a49gkzvb83lqqw65lxlaszpicn663hwi9wrbsb3f6z7znylkzaf"; depends=[fBasics fExoticOptions fOptions]; }; fChange = derive2 { name="fChange"; version="0.1.0"; sha256="1pj4q9dsqqgv198kfv410qkpgynhd580bcsigmak598m5jx3rf7l"; depends=[fda lattice reshape2 sandwich sde]; }; fCopulae = derive2 { name="fCopulae"; version="3042.82"; sha256="10wknqrrs5j63v7qnp5qmk85688r36vli4r99i49y2i2nv10yp5r"; depends=[fBasics fMultivar timeDate timeSeries]; }; - fDMA = derive2 { name="fDMA"; version="2.2.1"; sha256="1yncwdzdc3592wzfz5q7wmvj9arhay7gsmh2z3aqx998l8y3rcdb"; depends=[doParallel foreach forecast gplots iterators MSwM png psych Rcpp RcppArmadillo tseries xts zoo]; }; + fDMA = derive2 { name="fDMA"; version="2.2.3"; sha256="17c9qm32pmbn236ynkkk0z4fdfyij3h1kx7y2i9x3m5q1z7dzwb4"; depends=[doParallel foreach forecast gplots iterators MSwM png psych Rcpp RcppArmadillo tseries xts zoo]; }; fExoticOptions = derive2 { name="fExoticOptions"; version="3042.80"; sha256="1b3y7j5ywic6xhsj2afq6y5f5l0npgav854rb87938rjckz95d4h"; depends=[fBasics fOptions timeDate timeSeries]; }; fExpressCertificates = derive2 { name="fExpressCertificates"; version="1.2"; sha256="1r4qkhf7alasbwjz910b0x4dlzm72af06kv7v2vwyzvf3byn21c5"; depends=[fCertificates Matrix mvtnorm tmvtnorm]; }; fExtremes = derive2 { name="fExtremes"; version="3042.82"; sha256="1n0afql4csgsqf7j9x2v8yxncvpknms643l9knm0fqb4pdbaw58c"; depends=[fBasics fGarch timeDate timeSeries]; }; @@ -5984,15 +6111,17 @@ in with self; { fNonlinear = derive2 { name="fNonlinear"; version="3042.79"; sha256="0kwjs7xx4ykw14mw3pff2axrq497jl4g23gbayswb8vrx1qhjibd"; depends=[fBasics timeDate timeSeries]; }; fOptions = derive2 { name="fOptions"; version="3042.86"; sha256="1cqyggb1hb7z0gfgkziynz7nm85z0fn3bvz1iwpy49yy8ll7rfzr"; depends=[fBasics timeDate timeSeries]; }; fPortfolio = derive2 { name="fPortfolio"; version="3042.83"; sha256="05dprxn0h2cd13m84rb1s5n8nr9m4v4dslqmm99481rp66kgc004"; depends=[fAssets fBasics fCopulae kernlab MASS quadprog Rglpk rneos robustbase Rsolnp slam timeDate timeSeries]; }; - fRLR = derive2 { name="fRLR"; version="1.0"; sha256="19w7fkjlfv0ckb4psck5il5rpiknlfsrm26wf7l1x553mkdbrknq"; depends=[Rcpp]; }; fRegression = derive2 { name="fRegression"; version="3042.82"; sha256="0pi777xfk101g0r2qpcd0qxqqfnvck3sii990d946ljw6366mamc"; depends=[fBasics lmtest mgcv nnet polspline timeDate timeSeries]; }; fSRM = derive2 { name="fSRM"; version="0.6.4"; sha256="1n91gzjx9r3r3xl400w38miva0b69c0f23h2056kq9p1bax2nm86"; depends=[foreign ggplot2 gridExtra lavaan plyr reshape2 scales tcltk2]; }; fTrading = derive2 { name="fTrading"; version="3042.79"; sha256="0xnfg4npfdrvmp1n6vbsm7if16n5j83b7y1i2m5b34cqnlz9d69y"; depends=[fBasics timeDate timeSeries]; }; fUnitRoots = derive2 { name="fUnitRoots"; version="3042.79"; sha256="1hsv47dm0hx3s04g9h0bjdgi79zbfihnfxxdc2jskqp94yl7azsy"; depends=[fBasics timeDate timeSeries urca]; }; fabCI = derive2 { name="fabCI"; version="0.1"; sha256="123bc56nnx6hcj257imsd8sc6d0pggw08lf4m0lr90631gcm1mkn"; depends=[]; }; - face = derive2 { name="face"; version="0.1-3"; sha256="0l4sp79p72n6iqbgi5aqif1669rwx3pka7l91d8dsw7x60bhikxj"; depends=[Matrix matrixcalc mgcv]; }; + fabricatr = derive2 { name="fabricatr"; version="0.2.0"; sha256="1jgfxifp7v80bddcs5zi5zidzhnzmsbvfa7qznaxyp3qknax2k67"; depends=[rlang]; }; + face = derive2 { name="face"; version="0.1-4"; sha256="0kkgblxzhjzifxnym6g5psiwvfgydk1scqbxraldklm8c4a12zc3"; depends=[Matrix matrixcalc mgcv refund]; }; facebook_S4 = derive2 { name="facebook.S4"; version="1.1.0"; sha256="1if3fgyvj6pbf48yjwa5fkn3s4rl6kj9s1nk6dwphykhx72ghzrj"; depends=[httr magrittr plyr rjson]; }; + facilitation = derive2 { name="facilitation"; version="0.5.2"; sha256="0gyqa3njyynvdhfziq33xqc7cjhszii67mk8809ncvh6abkdx1hw"; depends=[animation Matrix Rcpp]; }; factoextra = derive2 { name="factoextra"; version="1.0.5"; sha256="1l6m8k7qhdw8ndar8nhmym0lfyd1i2iszl1cicjax0vq23ss6xw1"; depends=[abind cluster dendextend FactoMineR ggplot2 ggpubr ggrepel reshape2 tidyr]; }; + factoptd = derive2 { name="factoptd"; version="1.0.3"; sha256="1ir50im3kr1xhqk4qwrm2h5fq9gqgrwshbamvjlf8n1wnn03mcb6"; depends=[MASS partitions]; }; factorMerger = derive2 { name="factorMerger"; version="0.3.2"; sha256="1drrzrazay0w42ls9r2bsbygmyah0hdpmlap8zmsjqnbl0xp6sq6"; depends=[agricolae colorRamps dplyr ggplot2 ggpubr knitr magrittr MASS mvtnorm proxy reshape2 scales survival]; }; factorQR = derive2 { name="factorQR"; version="0.1-4"; sha256="1vl01fm5qfyhnqbl5y86vkr50b8cv07vzlqs3v6smqaqq6yp4lv4"; depends=[lattice]; }; factorcpt = derive2 { name="factorcpt"; version="0.1.2"; sha256="17hwlsrj0fx4x05p6xvs6kl43a24icmnrzyvpf2vam5imwvmpvmm"; depends=[doParallel fields foreach iterators Rcpp RcppArmadillo]; }; @@ -6002,7 +6131,7 @@ in with self; { fail = derive2 { name="fail"; version="1.3"; sha256="0vfm6kmpmgsamda5p0sl771kbnsscan31l2chzssyw93kwmams7d"; depends=[BBmisc checkmate]; }; faisalconjoint = derive2 { name="faisalconjoint"; version="1.15"; sha256="08sb4za8qyadvigq2z7b0r44qk2lpahpnz9nv16xfjb1zhdkz5w3"; depends=[]; }; fakeR = derive2 { name="fakeR"; version="1.0"; sha256="0f4ngnd8s34j1327zp3aqnsiw0gfxkp1i24ng20hrmfl13s1qmxp"; depends=[mvtnorm polycor pscl VGAM]; }; - fakemake = derive2 { name="fakemake"; version="1.0.2"; sha256="1f6hc5xxpvq8hgaf9ng4zd9fgwpirmjqlr7ykr4c4krkfb9f0hjx"; depends=[callr igraph MakefileR withr]; }; + fakemake = derive2 { name="fakemake"; version="1.2.0"; sha256="1acd404fl0bc6xsal39vgx4j5jdqa24csn15cmw26yach7dxrm87"; depends=[callr igraph MakefileR withr]; }; falcon = derive2 { name="falcon"; version="0.2"; sha256="09hlvwwj3k3nhcsxijjvv8x74a9m200ayjjplrp4baxvczwyq341"; depends=[]; }; falconx = derive2 { name="falconx"; version="0.2"; sha256="0648mvbc7ga7vr2xqzyln3dgd11h5s4bqhv3p55mj7smr4qv7hv9"; depends=[]; }; fam2r = derive2 { name="fam2r"; version="1.2"; sha256="0pq5cmzwk3s8cz5x8dsfb2d6qfpapkrwbzvkqmqkhcwhwryy40mm"; depends=[Familias paramlink]; }; @@ -6020,13 +6149,13 @@ in with self; { fasjem = derive2 { name="fasjem"; version="1.1.2"; sha256="1bbrcyyg96hakgla3604byrkn9034197vy2is048kdq20yr2y11n"; depends=[igraph]; }; fast = derive2 { name="fast"; version="0.64"; sha256="098rk6kszdx3szcwvwzcv7zlcd6qvqvbqch7q8ilas6vbki81ba4"; depends=[zoo]; }; fastAdaboost = derive2 { name="fastAdaboost"; version="1.0.0"; sha256="1pv1y6znvc37pgwk99v4r0hljhipq8v6r3r5cb5vhgyl0bfi8g38"; depends=[Rcpp rpart]; }; - fastDummies = derive2 { name="fastDummies"; version="0.1.2"; sha256="15c5rkz4d7ghmm052ybd4l0gbbyr0wrihal4fi5y6cvss1jja7gq"; depends=[data_table]; }; + fastDummies = derive2 { name="fastDummies"; version="1.0.0"; sha256="05jkgjd4aavy7631xczqvag51afyvr80ki1w6caznx5fc4z53wfb"; depends=[data_table]; }; fastGHQuad = derive2 { name="fastGHQuad"; version="0.2"; sha256="0yv3wdyj7hs1gr3rq08k520v0ldmv5zzng709xjx2kchhwhmy8ah"; depends=[Rcpp]; }; fastGraph = derive2 { name="fastGraph"; version="1.1"; sha256="1vbi5yssnh8hcbmrq1r437vpvj8hqd3vc8wmcy0nbyvnmyjaxkvb"; depends=[]; }; fastHICA = derive2 { name="fastHICA"; version="1.0.2"; sha256="1h794ybbii0k7v3x0r1499zxdqa1i1dpi3i7idzqdrffnb5kmwlv"; depends=[energy fastICA]; }; fastICA = derive2 { name="fastICA"; version="1.2-1"; sha256="108z2ymby5y4h8l4l2krqwm28rya93gq09yylgilnm3afvfrfabg"; depends=[]; }; fastJT = derive2 { name="fastJT"; version="1.0.4"; sha256="1pa4qpcf4qmzk6s8qgk60n5ialz8gcj5m8d7xr10cmn4jfwghc7b"; depends=[Rcpp]; }; - fastLink = derive2 { name="fastLink"; version="0.2.0"; sha256="1n8yzwlcvj1bcdzxvlprh5q3wk2mbw7jpc40bjc5mpgrx0vpf95c"; depends=[adagio data_table doParallel dplyr FactoClass foreach gtools Matrix plotrix Rcpp RcppArmadillo RcppEigen stringdist stringi stringr]; }; + fastLink = derive2 { name="fastLink"; version="0.3.1"; sha256="0d77z88vv8gw1hp3cpnx481yn7p5y4nq3qzsv63bifad0msnqixy"; depends=[adagio data_table doParallel dplyr FactoClass foreach gtools Matrix plotrix Rcpp RcppArmadillo RcppEigen stringdist stringi stringr]; }; fastM = derive2 { name="fastM"; version="0.0-2"; sha256="0q5dz47sqj6d4r3k6l6q34l5ajb8fjbf7xam75scp0mg3czswnfn"; depends=[Rcpp RcppArmadillo]; }; fastR = derive2 { name="fastR"; version="0.10.3"; sha256="1sz6krxiamq3rp4h9ah2b1zvyyrlvsn7lpvrjv1xda2c1kqqkvmk"; depends=[lattice mosaic mosaicCalc mosaicData]; }; fastR2 = derive2 { name="fastR2"; version="0.2.0"; sha256="1xwa4v0j2n0qxn1prhc9x0sz53fhsfbg2m1a6kfdp7cpvvk46pw5"; depends=[dplyr ggformula ggplot2 lattice magrittr maxLik miscTools mosaic numDeriv]; }; @@ -6038,11 +6167,12 @@ in with self; { fastcox = derive2 { name="fastcox"; version="1.1.3"; sha256="0jn19v6mkwgyz8x63xrfgkgnf0f2rq338r5qkhz690mdzr4c47a3"; depends=[Matrix]; }; fastdigest = derive2 { name="fastdigest"; version="0.6-3"; sha256="02csl261v7nassi5119ygw6jglm8q6rssg7lgyxzj73mkyilm832"; depends=[]; }; fasteraster = derive2 { name="fasteraster"; version="1.1.1"; sha256="1ycr2h046jds2758xvxn00rhglx3zarbzn3r38j66j5pnz2iiq4f"; depends=[Rcpp]; }; + fastmaRching = derive2 { name="fastmaRching"; version="1.0.0"; sha256="17z5frf5c50y4387l4vbwwbm8z1wn0yyr7kp044s4q8bp1k2pqv3"; depends=[raster rgdal sp]; }; fastmatch = derive2 { name="fastmatch"; version="1.1-0"; sha256="0z80jxkygmzn11sq0c2iz357s9bpki548lg926g85gldhfj1md90"; depends=[]; }; - fastnet = derive2 { name="fastnet"; version="0.1.3"; sha256="06nxfwv85gm93bcgq53a6z929sqcij0adkg55g5y03hcm8v8v3aa"; depends=[doParallel foreach igraph]; }; + fastnet = derive2 { name="fastnet"; version="0.1.4"; sha256="0hc18yc2cmvb5v8vjj1xvnciz35hyfp9iyqhkg9jfjrlf89icny6"; depends=[doParallel foreach igraph tidygraph]; }; fastpseudo = derive2 { name="fastpseudo"; version="0.1"; sha256="0paag4pjh3gs270j663bsl65sfrq43gk2zzqmalr03fmcckp6aaj"; depends=[]; }; fastqcr = derive2 { name="fastqcr"; version="0.1.0"; sha256="0hzlp66as7k0bh3biqkngacpkq1hi3y3gp6wg4c5476ywzm83gra"; depends=[dplyr ggplot2 gridExtra magrittr readr rmarkdown rvest scales tibble tidyr xml2]; }; - fastrtext = derive2 { name="fastrtext"; version="0.2.3"; sha256="18k4inzjp5k1yk1hi2fmz34iskcjd6igq54i2cj4f5p84n6b1rbb"; depends=[assertthat Rcpp RcppThread]; }; + fastrtext = derive2 { name="fastrtext"; version="0.2.5"; sha256="0zbd2sxzarxic90d2pkbn7fak5gyb81b180m91f784smb3sx1p1j"; depends=[assertthat Rcpp]; }; fasttime = derive2 { name="fasttime"; version="1.0-2"; sha256="11i4c0zrkvvqsax0az1fvmc0jxfsjyx28434k1qgzhj9g2j9m9cf"; depends=[]; }; fat2Lpoly = derive2 { name="fat2Lpoly"; version="1.2.2"; sha256="1xqr4azc5gsr7kcm8qzwjpjy72w1b111i61wbm35vns9r38a6cxz"; depends=[kinship2 multgee]; }; fauxpas = derive2 { name="fauxpas"; version="0.1.0"; sha256="1mi19zrgkx25g8j1f948n0ps27dn0rr2jqnhf15w73lpsjbwvi54"; depends=[httpcode R6 whisker]; }; @@ -6059,17 +6189,17 @@ in with self; { fcuk = derive2 { name="fcuk"; version="0.1.21"; sha256="1sb7p1m5qb88028mrw95lhh8l7dxj696hjh88nfsdpnscryknfpv"; depends=[magrittr purrr stringdist tibble]; }; fdANOVA = derive2 { name="fdANOVA"; version="0.1.0"; sha256="10c12yns1sv4ph61hma1mymab03xyyx933f27977lw3c0npy7b02"; depends=[doBy doParallel fda foreach ggplot2 magic MASS]; }; fda = derive2 { name="fda"; version="2.4.7"; sha256="0371c32kxxvfdh18ldgc2p76dr2436ay0n9prdjwm9v0azp4rp9k"; depends=[Matrix]; }; - fda_usc = derive2 { name="fda.usc"; version="1.3.0"; sha256="1ask7g6mqwx8r1hd9vxzdl96z0gyqprswjpfcl7l5l3611m7mzdm"; depends=[fda MASS mgcv nlme rpart]; }; + fda_usc = derive2 { name="fda.usc"; version="1.4.0"; sha256="0gp19c5lxp0g4690vdr0gpw89rl9v3l6872mf7hr8nsyyd6776vn"; depends=[fda MASS mgcv nlme rpart]; }; fdaMixed = derive2 { name="fdaMixed"; version="0.5"; sha256="1k2b3z2jj37j6njvxalg8640zlcvi1cm7wkcwp0pia21wydz75ip"; depends=[Formula Rcpp RcppArmadillo]; }; fdaPDE = derive2 { name="fdaPDE"; version="0.1-4"; sha256="0n72x5h00n17yxjniim2qxz2phy1srk04dn6ivvc58k3x252fzkh"; depends=[RcppEigen rgl]; }; - fdadensity = derive2 { name="fdadensity"; version="0.1.0"; sha256="18701asyyaglhmjbac9pi2xy7v8l2llcbzgrdsmr5jmiwazshqhz"; depends=[fdapace Rcpp]; }; + fdadensity = derive2 { name="fdadensity"; version="0.1.1"; sha256="0jj5gprv3ihdjic261czqnv7c13mxsmjmv7gn2gv4483kgijlkz9"; depends=[fdapace Rcpp]; }; fdakma = derive2 { name="fdakma"; version="1.2.1"; sha256="0j9qgblrl7v4586dd6v0hjicli6jh8pkk5lzn8afpl75xfs24six"; depends=[]; }; fdapace = derive2 { name="fdapace"; version="0.3.0"; sha256="1r4s20spsiags7z8hyvbvi9gxjxs4v8hfnrqya872shagk9iadyl"; depends=[Hmisc Matrix numDeriv pracma Rcpp RcppEigen]; }; - fdasrvf = derive2 { name="fdasrvf"; version="1.8.2"; sha256="10j2zh0jfxi46vf2cf9k561ff3qy6vhp1hj1q2zwvpbxaa1lyjb3"; depends=[coda doParallel fields foreach matrixcalc mvtnorm Rcpp RcppArmadillo viridisLite]; }; + fdasrvf = derive2 { name="fdasrvf"; version="1.8.3"; sha256="1lqyadg17ddd3vksbaxc7bpwvk0afsd59rfg0n5wrgvhbd473s0y"; depends=[coda doParallel fields foreach matrixcalc mvtnorm Rcpp RcppArmadillo testthat viridisLite]; }; fdatest = derive2 { name="fdatest"; version="2.1"; sha256="0zdnmssir5jz2kbfz4f4xshjfv4pivqx7cbh2arlx6ypkjrjws8n"; depends=[fda]; }; - fdcov = derive2 { name="fdcov"; version="1.0.0"; sha256="1m6yk6ngsxrz5mywp3vqhfjpkskrzgdyvqw7j8k2jgy4l0x04g5g"; depends=[corrplot matlab]; }; + fdcov = derive2 { name="fdcov"; version="1.1.0"; sha256="0savsgcifcjjqrmbpn6m30gncq5iigqxpb19l710wlx8nm98svjh"; depends=[corrplot matlab]; }; fdq = derive2 { name="fdq"; version="0.2"; sha256="1iyplxm6niywfhmdnliy9nvvax1w6sijar8gpsj853cdfvn6kz5m"; depends=[data_table Fgmutils ggplot2 plyr randomcoloR sqldf]; }; - fdrDiscreteNull = derive2 { name="fdrDiscreteNull"; version="1.2"; sha256="1x53hp5wixymasgnlh1vci0zavkhn1d7l3vi8lq1gzpzn5zjx2vi"; depends=[MCMCpack]; }; + fdrDiscreteNull = derive2 { name="fdrDiscreteNull"; version="1.3"; sha256="17nzqy4i1c5kcqyps52827q5apyjn4znb1ql4qvfm8v2m1fvily3"; depends=[MCMCpack qvalue]; }; fdrci = derive2 { name="fdrci"; version="2.1"; sha256="1sgrsmlz7sbr1maw3qnpzqz3z75fh5nyiibpsq8j0y12xac8d0x3"; depends=[]; }; fdrtool = derive2 { name="fdrtool"; version="1.2.15"; sha256="1h46frlk7d9f4qx0bg6p55nrm9wwwz2sv6d1nz7061wdfsm69yb5"; depends=[]; }; fds = derive2 { name="fds"; version="1.7"; sha256="164f2cbywph7kyn712lfq4d86v22j4y3fg5i9zyz956hipqv0qvw"; depends=[rainbow RCurl]; }; @@ -6097,26 +6227,30 @@ in with self; { fgof = derive2 { name="fgof"; version="0.2-1"; sha256="0bclkb3as0fl2gyggqxczndfyj9pfnni5pa3inpn5msrnjg4g2j2"; depends=[mvtnorm numDeriv]; }; fgpt = derive2 { name="fgpt"; version="2.3"; sha256="1d0qzsn4b68jhk07k97iv765jpmzzh1gwqpid0r76vg4cwqfs3n7"; depends=[]; }; fgui = derive2 { name="fgui"; version="1.0-5"; sha256="0gzwxzvf2y9p5rlfk862d7l1dm2sdwjhjpcb8p494cj4g1xshazg"; depends=[]; }; - fields = derive2 { name="fields"; version="9.0"; sha256="0fjk1gcgmmra38f574smv2grk3vkd81gldic85liaws1nqvb0z4w"; depends=[maps spam]; }; + fields = derive2 { name="fields"; version="9.6"; sha256="1v7z48a8jmdcil28rj8c3455k6rssr5v9qi6dyhhpbb193bj8121"; depends=[maps spam]; }; fiery = derive2 { name="fiery"; version="1.1.0"; sha256="0251vfr7b8r4xjgcf8gyh1ddj0lj73fl0pim0k3vpzva5wmwigs1"; depends=[assertthat crayon desc future glue httpuv later R6 reqres stringi uuid]; }; fifer = derive2 { name="fifer"; version="1.1"; sha256="1gcv8ns4c1y3pjmixdm16raa5h6jqmc3i4m37ahj97l720j1f2ya"; depends=[fields Hmisc MASS party plotrix randomForest randomForestSRC rpart xtable]; }; fiftystater = derive2 { name="fiftystater"; version="1.0.1"; sha256="1nri9vsqif03xrmm3g5llasqm49hj169mgv046f2l0mh9vp0fqpc"; depends=[]; }; filehash = derive2 { name="filehash"; version="2.4-1"; sha256="1x7an7rsy5pz2qr86m511rsv297vacxwk3y1a71754yq739qgq6h"; depends=[]; }; filehashSQLite = derive2 { name="filehashSQLite"; version="0.2-4"; sha256="1higvkmj4wvnwpvayqinzaygiksij20d77dx118q0gffsczadamh"; depends=[DBI filehash RSQLite]; }; - filematrix = derive2 { name="filematrix"; version="1.1.0"; sha256="1z1nlpmckmh96zfc17gkgagagzz84ih6sjy4b8vfv1nzfipprsfy"; depends=[RSQLite]; }; - filenamer = derive2 { name="filenamer"; version="0.2.1"; sha256="0xahzjgwfpyln6i2szr985csw11w8wwk644sgclwly9l2yqzsi3i"; depends=[]; }; + filelock = derive2 { name="filelock"; version="1.0.1"; sha256="11mmq296zg62gnxjk7dyr866kihihmsjpfg6bcc7hv6ivh4812nn"; depends=[]; }; + filematrix = derive2 { name="filematrix"; version="1.2"; sha256="1n8gy1fh0af3b43y7c1139lxyjn75fi2pdsn3c5mm4iscfmarl0r"; depends=[]; }; + filenamer = derive2 { name="filenamer"; version="0.2.2"; sha256="0289qpy4891fb71fa4bhc8wp4g7n1sw1kis5k5irdyyzmsa9dfhn"; depends=[]; }; fileplyr = derive2 { name="fileplyr"; version="0.2.0"; sha256="15rxls0njd6j2vxdahf4fx2nxmsa3rc41812v3wlaqas99naaxxr"; depends=[assertthat datadr tibble]; }; files = derive2 { name="files"; version="0.0.1"; sha256="1vhhawqjjbb6fadkn3l10mvz63w3vmcwvl93fk0q9mhkifzlj9kc"; depends=[]; }; - filesstrings = derive2 { name="filesstrings"; version="1.1.0"; sha256="0nyrmc3lhr4dx5ga90mra3jchi6i64vvm68m503lxiiix9s8ii9s"; depends=[magrittr matrixStats ore Rcpp readr stringr tibble]; }; + filesstrings = derive2 { name="filesstrings"; version="2.0.4"; sha256="14qx9jiqg7vs340ss4vlg5jgald7pl111bnvv8279bdgjilrd4yf"; depends=[checkmate magrittr matrixStats ore purrr Rcpp stringr tibble]; }; + filling = derive2 { name="filling"; version="0.1.0"; sha256="0avlfl06nd8wn76ydii09ng2fqp92d4n9v2y5vg16m3my58l0srd"; depends=[CVXR nabor Rcpp RcppArmadillo Rdpack ROptSpace RSpectra]; }; financial = derive2 { name="financial"; version="0.2"; sha256="1v6jgs3rq57byin5mynslfjk3zrx91qz36558nn17mv6z0qsf10v"; depends=[]; }; - finch = derive2 { name="finch"; version="0.1.0"; sha256="0pqli6l049s9pdk0gphch1pw8i0f1fr3562akms1x7hvdkn9c0i9"; depends=[data_table digest EML plyr rappdirs xml2]; }; - findpython = derive2 { name="findpython"; version="1.0.2"; sha256="1x38dbxr6yvxy2z2fvv00y263g66ljbzf3a8znl2fywj462i92xk"; depends=[]; }; + finch = derive2 { name="finch"; version="0.2.0"; sha256="1vganbkz2d96xfz2jf1q0kqarc575w3nswss2igynsbbd0y53mjm"; depends=[data_table digest EML hoardr plyr rappdirs xml2]; }; + findR = derive2 { name="findR"; version="0.2.0"; sha256="03xkp8akjaciv2cl1przzz56nc3ma8l7pr4k0c3w2y0sivkmawdk"; depends=[pdftools]; }; + findpython = derive2 { name="findpython"; version="1.0.3"; sha256="1y08jk2ffmkf9zpwiz2xymjhfwqvls9vzsnq62v278ghw9d571jl"; depends=[]; }; findviews = derive2 { name="findviews"; version="0.1.3"; sha256="1l1yhw5hvrn0rpkdsch8m69d2q5284jwccvv7r4ia4m0iqjfipj7"; depends=[ggplot2 gridExtra scales shiny]; }; - fingerprint = derive2 { name="fingerprint"; version="3.5.6"; sha256="1qidi88i1wh0gpicklk0f0l4j3azwmh0crpwnandkjx4nk1pfxxs"; depends=[]; }; - fingertipsR = derive2 { name="fingertipsR"; version="0.1.3"; sha256="192ns87gp7cgnfjdnnfmxlf30dq85dv29b964273bn21gq2kwwv3"; depends=[data_table dplyr DT httr jsonlite miniUI purrr readr shiny shinycssloaders]; }; + fingerprint = derive2 { name="fingerprint"; version="3.5.7"; sha256="04jcwkydjrs31pia6kq8z2n9s54im950q08hs2ay15xjxxkmb8ic"; depends=[]; }; + fingertipsR = derive2 { name="fingertipsR"; version="0.1.5"; sha256="0g1r2mrivnfv7icba1y9lx5h2a3swmd41ry2064n82l05iaw9wsp"; depends=[dplyr DT httr jsonlite miniUI purrr readr shiny shinycssloaders]; }; finiteruinprob = derive2 { name="finiteruinprob"; version="0.6"; sha256="0z4l0crymh58chxniqq70fqmvi6f5jkgvz72vbc7s3l9lrrapgr3"; depends=[numDeriv sdprisk]; }; finreportr = derive2 { name="finreportr"; version="1.0.1"; sha256="1mansiyl4p4zqc1h2aw9zgzb3fy4mppgmshdm8mcf4nbm340g4vk"; depends=[curl dplyr httr rvest XBRL xml2]; }; fishMod = derive2 { name="fishMod"; version="0.29"; sha256="0pbs4z27vwa3c42xdw3mr6l2i581bgvn2pk52kawbcnnlsff92ar"; depends=[]; }; + fishdata = derive2 { name="fishdata"; version="0.1.3"; sha256="04162m1j570cdwhffkwjs1x1qlsc20djj1jwx2hl2cqmbp584ppq"; depends=[]; }; fisheyeR = derive2 { name="fisheyeR"; version="0.9"; sha256="1w6va7gakqq2q8hsvdszpn8s2ysdfc648bk5p5v3wbl5s403bci8"; depends=[tkrplot]; }; fishkirkko2015 = derive2 { name="fishkirkko2015"; version="1.0.0"; sha256="1s8vsf604rc6qk0gahn61p3q8p9dhsbq14wsmrin7icq2xgl3y81"; depends=[]; }; fishmethods = derive2 { name="fishmethods"; version="1.10-4"; sha256="1ir9r0bnp4klmm0i2iqqg03jd2qm19q885mqwpgcnl2mv8d45dwn"; depends=[boot bootstrap lme4 MASS numDeriv]; }; @@ -6129,8 +6263,9 @@ in with self; { fitdc = derive2 { name="fitdc"; version="0.0.1"; sha256="1b1abib7jkl7a6r686r53qjw2ywb9q2h67is8691kkaqxpawg30p"; depends=[]; }; fitdistrplus = derive2 { name="fitdistrplus"; version="1.0-9"; sha256="18x9454g598d54763k3hvi33iszifk7sxvhd1zg5r8z1vpixx3z6"; depends=[MASS survival]; }; fitplc = derive2 { name="fitplc"; version="1.1-7"; sha256="1dffgqsml6cj6ayqdpr0330kj8v57jwi3pgchb8v98rainygsyfw"; depends=[car nlme]; }; - fitur = derive2 { name="fitur"; version="0.5.0"; sha256="1w6nq8n7wrpzpxx6miklqy1x3p9n57sag3wjc96ba9zhmj18aas5"; depends=[actuar e1071 fitdistrplus]; }; - fivethirtyeight = derive2 { name="fivethirtyeight"; version="0.3.0"; sha256="0m70yxfp1aspf4g4v21pwhkapnzxjx8cg06w37z0i69gl4lmyq9j"; depends=[]; }; + fitteR = derive2 { name="fitteR"; version="0.1.0"; sha256="1kgnyl7am966vkfap8gmvchlpankrcj5dv5aj7ws8ix9shr76db6"; depends=[dplyr DT maxLik R_utils shiny]; }; + fitur = derive2 { name="fitur"; version="0.5.20"; sha256="1iv8vzbhjlv72rcby0n2615bi8jn1wykwlf7n0i85wqaw04di4lr"; depends=[actuar e1071 fitdistrplus ggplot2]; }; + fivethirtyeight = derive2 { name="fivethirtyeight"; version="0.4.0"; sha256="1sdj5b365hi11dd2yxvg9w3fz3rx9rbv1nnhf5i8v2ydg4kqyrws"; depends=[]; }; fixedTimeEvents = derive2 { name="fixedTimeEvents"; version="1.0"; sha256="0z7ji8yzp4pj76ad64l7ivknkbi82ijx6abd3a18wicqhrh433sj"; depends=[]; }; fizzbuzzR = derive2 { name="fizzbuzzR"; version="0.1.1"; sha256="119gbi9y4n8r52hk9vj7zf795dv9xnk7lnngljjcd7ydnhygwd4h"; depends=[]; }; flacco = derive2 { name="flacco"; version="1.7"; sha256="1w77smmbrwglayr2rj88b00x7wan9f3x1fq8h6xyhybfvrw7vr0r"; depends=[BBmisc checkmate mlr]; }; @@ -6142,19 +6277,21 @@ in with self; { flatr = derive2 { name="flatr"; version="0.1.1"; sha256="10l98a3f57wahfpdqxj70r25zfhk4vzzd014pdnriy458yrfd7rw"; depends=[dplyr magrittr tibble]; }; flexCWM = derive2 { name="flexCWM"; version="1.7"; sha256="0kgvj3l4cscr1p3305mnz42km5i8280wrvxp317dif3pvq7iigi4"; depends=[ContaminatedMixt mclust numDeriv statmod]; }; flexPM = derive2 { name="flexPM"; version="2.0"; sha256="0h3qs9w9pc2nc24q1diz7j3s93y40ijpmgq2l0xg9mzcgjz9kz8c"; depends=[survival]; }; - flexclust = derive2 { name="flexclust"; version="1.3-4"; sha256="1x9gyg69kb3wn02w885kl6hcwpf2ki66gzfayvc83jisrwxvdfvv"; depends=[lattice modeltools]; }; - flexdashboard = derive2 { name="flexdashboard"; version="0.5"; sha256="1dv1h32diff7174mxw2n3l2216crnyb6c38qbrramhj5w72zf3da"; depends=[htmltools htmlwidgets jsonlite knitr rmarkdown shiny]; }; + flexclust = derive2 { name="flexclust"; version="1.3-5"; sha256="19ihdhmhaglccqpvrpc51367gkfafg4jdpabbk0j6mh2n16hi511"; depends=[lattice modeltools]; }; + flexdashboard = derive2 { name="flexdashboard"; version="0.5.1"; sha256="0jb5wswbjr58g121nbvl93p73gxr8cx56kajgpiaw1fis6dsyfyz"; depends=[htmltools htmlwidgets jsonlite knitr rmarkdown shiny]; }; flexmix = derive2 { name="flexmix"; version="2.3-14"; sha256="0sl4zxh1sb2sr5q7svjw9ihrm219jzn82yrc9d43q6r1b8bpyz43"; depends=[lattice modeltools nnet]; }; flexrsurv = derive2 { name="flexrsurv"; version="1.4.1"; sha256="13jq7yk7rz2148wkf7dv28l79zwdf1gpfkd5khgacb8hl5kml3p0"; depends=[Epi formula_tools matrixcalc orthogonalsplinebasis survival]; }; flexsurv = derive2 { name="flexsurv"; version="1.1"; sha256="1vj8zsfgq2rv6v7na4w7n7z3farc69qsavm7pnmnhkaylz61gq26"; depends=[deSolve mstate muhaz mvtnorm quadprog Rcpp survival]; }; flexsurvcure = derive2 { name="flexsurvcure"; version="0.0.2"; sha256="1lhw2z8i4l822ncziwpw6hg0dzc244q60n7l5aahgdhcr0xgylhz"; depends=[flexsurv gtools survival]; }; - flextable = derive2 { name="flextable"; version="0.3.0"; sha256="0pim9yw33v608c9vjvz0r4xw44v8wwncvnv5j6k5ppm9nmz2x51x"; depends=[gdtools htmltools htmlwidgets lazyeval magrittr officer purrr R6 stringr tibble]; }; + flextable = derive2 { name="flextable"; version="0.4.2"; sha256="07a962ylr3y8v31557iqzr1m0c8bvprilfdimwzjl9fhlplb9y4h"; depends=[gdtools htmltools knitr officer R6 rmarkdown stringr]; }; flifo = derive2 { name="flifo"; version="0.1.4"; sha256="1yilfnblarimc8mlvvwsgib5sxcfgvgsvgpyzddxb39g6fb7lffs"; depends=[bazar pryr]; }; flip = derive2 { name="flip"; version="2.4.3"; sha256="04zf2gnk5w57gxnlnh26pn1ir1wfrzxhfhchr33ghk7prhc7k4b8"; depends=[cherry e1071 Rcpp RcppArmadillo someMTP]; }; flippant = derive2 { name="flippant"; version="1.1.0"; sha256="06aj90y7c33c1q0nw1c67vr1pfmp9fw78az6ivrbq110f2k1m12w"; depends=[assertive_files assertive_numbers assertive_properties assertive_strings assertive_types data_table ggplot2 magrittr minpack_lm plyr RcppRoll stringi withr wmtsa]; }; + flipscores = derive2 { name="flipscores"; version="0.1"; sha256="0jb9im2p3x20y356av749mni3cka2byhv7glz7qhdmsdryrdizh7"; depends=[]; }; + float = derive2 { name="float"; version="0.1-1"; sha256="0bzwc48l4wijrxz3swrp720q9jsa74qwv6s8zpigbnjkspsqy3vi"; depends=[]; }; flock = derive2 { name="flock"; version="0.7"; sha256="1zg93p74icj4bhxnmnssj2xp6vw4yaksyavq03497v33xfpdxss7"; depends=[Rcpp]; }; flood = derive2 { name="flood"; version="0.1.1"; sha256="0nlmjh2l7dij1aqd70hhj0m550knlin3am14azqkx4pacs1kir3p"; depends=[copula evd magrittr TLMoments]; }; - flora = derive2 { name="flora"; version="0.2.8"; sha256="1asggrfp7i6z9p7lp1ab9i9i6xzz0qafxs03irpqig4pqw0qwm7d"; depends=[dplyr httr jsonlite]; }; + flora = derive2 { name="flora"; version="0.3.0"; sha256="1nsc2q6y02shpk70p44rr7nl7pnj6as7jgdyakxqs64imwais8x2"; depends=[dplyr httr jsonlite stringdist]; }; flowDiv = derive2 { name="flowDiv"; version="2.0"; sha256="1p89l8q1i610bl1bvx6lmkygb094pvydgbmd8kx0640a11rblx8v"; depends=[flowCore flowWorkspace ggplot2 gridExtra vegan]; }; flower = derive2 { name="flower"; version="1.0"; sha256="1h2fvpjrvpbyrqb8hd51sslr1ibpwa7h9fiqy9anvf2yim5j11yq"; depends=[]; }; flowfield = derive2 { name="flowfield"; version="1.0"; sha256="1cx3i0w3xq781mmms4x20fshlf1i9bwxw9bxx562crix3fq3m50j"; depends=[]; }; @@ -6163,17 +6300,17 @@ in with self; { flsa = derive2 { name="flsa"; version="1.05"; sha256="07z2b1pnpnimgbzkjgjl2b074pl9mml7nac2p8qvdgv7aj070cmh"; depends=[]; }; flux = derive2 { name="flux"; version="0.3-0"; sha256="0pc9cab2pwrfl0fnz29wp7a398r49hvbi50jp8i2fk2rfvck21a7"; depends=[caTools]; }; fma = derive2 { name="fma"; version="2.3"; sha256="1z7shh9ng3q7ax22cwg86y79jzz5gbchdny2rppzzm0lkvvyy5pm"; depends=[forecast]; }; - fmbasics = derive2 { name="fmbasics"; version="0.2.0"; sha256="0ni3gyacga9wwmqbgxjndxl6jv62m8r18wxb91by9plmqabb4yqs"; depends=[assertthat fmdates lubridate tibble]; }; - fmdates = derive2 { name="fmdates"; version="0.1.3"; sha256="1v4gc38c3d7hhbj5h0dx3lyf90w4pb0w988y5nb0d8zl29gi6psz"; depends=[assertthat lubridate]; }; + fmbasics = derive2 { name="fmbasics"; version="0.3.0"; sha256="1dnf09rgwpc7n7ydlp7r5cwy2fa4vh1h9mbjqzfhk0208kz6jpl0"; depends=[assertthat fmdates lubridate tibble]; }; + fmdates = derive2 { name="fmdates"; version="0.1.4"; sha256="1bbcwkh65nf2gak9b81zgg32c5ihwhmai3nc43ayf6ivhqsxw8x0"; depends=[assertthat lubridate]; }; fmri = derive2 { name="fmri"; version="1.7-2"; sha256="1ifp0fkmr0bj5vkg9vh0lk74f04fk0zc90vknmjmxd2hbdb5kh4r"; depends=[awsMethods metafor nlme]; }; - fmriqa = derive2 { name="fmriqa"; version="0.1.0"; sha256="1d9whlrdml6ws6inilh3p60xqm26whychn94ys2bw8b01pwwlnqd"; depends=[ggplot2 gridExtra optparse pracma RcppEigen reshape2 RNifti tidyr viridisLite]; }; + fmriqa = derive2 { name="fmriqa"; version="0.3.0"; sha256="1z09nf1c305a78c129jvs21b9z91wyhazz41wrn4bimmhfhx7szv"; depends=[ggplot2 gridExtra imager optparse pracma RcppEigen reshape2 RNifti tidyr viridisLite]; }; fmrs = derive2 { name="fmrs"; version="1.0-9"; sha256="1x9g67701kcnz3p97iynr74sn0mfpxpp16mv1l4zxlhhfn2v5lwx"; depends=[survival]; }; fmsb = derive2 { name="fmsb"; version="0.6.1"; sha256="1kdw0j1jl76dzsk56lpl5vvrx5l0w9rc94kmj1dhbqb5yh64xai7"; depends=[]; }; fmt = derive2 { name="fmt"; version="1.0"; sha256="13gsywnyvf9zy5n644g2xyd60f92w2dp7vil2dncjvjcqsib22a0"; depends=[]; }; foba = derive2 { name="foba"; version="0.1"; sha256="1af8whgl66v0vwzdf03b6141k3dysdc0svymlgifcga5gqkwzsl0"; depends=[]; }; focusedMDS = derive2 { name="focusedMDS"; version="1.3.3"; sha256="18s86dbbpyajscqr9frprf2vp1zif7vh4lw5m0cjskfc6gmsdp2p"; depends=[htmlwidgets]; }; - foghorn = derive2 { name="foghorn"; version="0.4.4"; sha256="19cabq0ffc03x2p9jjsnfh1bpkdlqa8lnf7qr6cvd3sczj4n1pdl"; depends=[clisymbols crayon curl dplyr httr lazyeval magrittr rvest tibble tidyr xml2]; }; - fold = derive2 { name="fold"; version="0.2.2"; sha256="1zc9zzaf878khhldl5h7gg285y5izq408vaxxssygmr696w7xv21"; depends=[csv dplyr encode lazyeval rlang spec tidyr]; }; + foghorn = derive2 { name="foghorn"; version="1.0.0"; sha256="0agnryzh3clcb0mz1nx6f9shkl6cx98v7mmbkj6mpk3xxilxa87n"; depends=[clisymbols crayon curl httr jsonlite rvest tibble xml2]; }; + fold = derive2 { name="fold"; version="0.2.5"; sha256="1h7vx8saq4mbmylh1zgldm8n17i8waq8fgr5d4q68553xmazws41"; depends=[csv dplyr encode lattice lazyeval magrittr metaplot rlang spec tidyr]; }; fontBitstreamVera = derive2 { name="fontBitstreamVera"; version="0.1.1"; sha256="0nipdlmhjv1wr3aidcl97nk6mppdkd65krgwqnhdsnv0jpfv761j"; depends=[]; }; fontHind = derive2 { name="fontHind"; version="0.1.1"; sha256="0qz3bj8vdy6jayy84p3vyxfwqll4v4qlklwq9wl981ii2k7g0vxf"; depends=[extrafont ggplot2 hrbrthemes]; }; fontLiberation = derive2 { name="fontLiberation"; version="0.1.0"; sha256="1w1rl0g4ayyp8lwppmz9yzj9cizg7i50g07216jkm1q5w0is9pmc"; depends=[]; }; @@ -6182,16 +6319,17 @@ in with self; { fontquiver = derive2 { name="fontquiver"; version="0.2.1"; sha256="0qv3i9hch7cygl9983s3w68wfh5qvym2jkm52pp06p6mq8a1i1wm"; depends=[fontBitstreamVera fontLiberation]; }; foodweb = derive2 { name="foodweb"; version="1-0"; sha256="1zm2a87g9bkpz90j9lax28s5hq1w7ia28qqb6vnvr1d7a47g9zi9"; depends=[rgl]; }; forams = derive2 { name="forams"; version="2.0-5"; sha256="1fh3m9896ksv1h7b027yb955bzyv70yafhqvn5crkzalzk3jpb0s"; depends=[vegan]; }; - forcats = derive2 { name="forcats"; version="0.2.0"; sha256="1mvwkynvvgz2vi8dyz11x7xrp53kadjawjcja34hwk1d89qf7g5m"; depends=[magrittr tibble]; }; - foreach = derive2 { name="foreach"; version="1.4.3"; sha256="10aqsd3rxz03s1qdb6gsb1cj89mj4vmh491zfpin4skj1xvkzw0y"; depends=[codetools iterators]; }; + forcats = derive2 { name="forcats"; version="0.3.0"; sha256="0mxn1hng43zdjh1v8shd80hrszrqahcpaqxs1s1sif0qxh84d0cm"; depends=[magrittr rlang tibble]; }; + foreach = derive2 { name="foreach"; version="1.4.4"; sha256="0j2yj0rn0d5nbzz9nq5rqqgnxhp9pbd92q4klsarl2xpsn8119y0"; depends=[codetools iterators]; }; forecTheta = derive2 { name="forecTheta"; version="2.2"; sha256="1a7ip3czm8k82kb8dx95m8q47kjhifdj51gzavd1zj9ni3vwbhfn"; depends=[forecast tseries]; }; forecast = derive2 { name="forecast"; version="8.2"; sha256="04mqx1szm22lhiqzncm8ad0kyqhv1y4d6v02gn70d78kxmjangzb"; depends=[colorspace fracdiff ggplot2 lmtest magrittr nnet Rcpp RcppArmadillo timeDate tseries zoo]; }; - forecastHybrid = derive2 { name="forecastHybrid"; version="1.1.9"; sha256="03wkfzlg8pcpalakq5cgmhcy9p7ds4x0hqnhsiaja4zghrqbj5b6"; depends=[doParallel foreach forecast ggplot2 reshape2 zoo]; }; + forecastHybrid = derive2 { name="forecastHybrid"; version="2.0.10"; sha256="04lspngh44y815amxlnhl74k5g7sj3bm0w8yy58fk8nqrl382pb6"; depends=[doParallel foreach forecast ggplot2 reshape2 zoo]; }; forecastSNSTS = derive2 { name="forecastSNSTS"; version="1.2-0"; sha256="1rnf2a7sri52sm976iicab660qk07pmz8jmd3q71dg4hmc30yf9j"; depends=[Rcpp]; }; forega = derive2 { name="forega"; version="1.0.3"; sha256="1n1gqm0bjdw13jm95zp0ni0hps07xjkswzrszvamn2f6sglrn73d"; depends=[forecast Rcpp robfilter]; }; foreign = derive2 { name="foreign"; version="0.8-69"; sha256="0s1lxmd85dd0kxx8hwk02w9l7pmpk4bpy7787fbyh2dbq5g9ys0k"; depends=[]; }; forensic = derive2 { name="forensic"; version="0.2"; sha256="0kn8wn6p3fm67w88fbarg467vfnb42pc2cdgibs0vlgzw8l2dmig"; depends=[combinat genetics]; }; forensim = derive2 { name="forensim"; version="4.3"; sha256="1jhlv9jv832qxxw39zsfgsf4gbkpyvywg11djldlr9vav7dlh3iw"; depends=[tcltk2 tkrplot]; }; + forestControl = derive2 { name="forestControl"; version="0.1.1"; sha256="0qfj4qf0d1bb1wllhpg9r8gvg353zdqv7py9a3hm33yhs3l5x0g5"; depends=[Rcpp]; }; forestFloor = derive2 { name="forestFloor"; version="1.11.1"; sha256="1sslxq44qmmmdhr7800bz8lj9w2l7f7x1vly3w2z7j1qdijc7nw7"; depends=[kknn randomForest Rcpp rgl]; }; forestinventory = derive2 { name="forestinventory"; version="0.3.1"; sha256="0brbg0q8j9ymvm527db7063kgs6i6flja7mxqk7yvaf3dh8wsi46"; depends=[ggplot2 plyr tidyr]; }; forestmodel = derive2 { name="forestmodel"; version="0.4.3"; sha256="1v1m8dvird2r1jqig492msqpp9sb4s79bhgnrs9y2c0ba46jzykh"; depends=[broom dplyr ggplot2 lazyeval]; }; @@ -6199,6 +6337,7 @@ in with self; { formatR = derive2 { name="formatR"; version="1.5"; sha256="19sd23vgs4ac0fwlw40j3676k6mramb0ajlq8hdw23kjwdx1jk47"; depends=[]; }; formattable = derive2 { name="formattable"; version="0.2.0.1"; sha256="1s7jjgm0j24vdwm39933ygh6xnxcfvzy4kl2mmfgas4czfcmd4rf"; depends=[htmltools htmlwidgets knitr rmarkdown]; }; formula_tools = derive2 { name="formula.tools"; version="1.6.8"; sha256="10j7cgzdfkpqnxy9jpw5yd1bwrz55yi8b1zn144wwqb779l2c5yn"; depends=[operator_tools]; }; + formulize = derive2 { name="formulize"; version="0.1.0"; sha256="1fz8q48z4zvfglxzmmjznb7lcfrrfqmnws85jfkihs3ff43h7ccc"; depends=[recipes rlang]; }; fortunes = derive2 { name="fortunes"; version="1.5-4"; sha256="109ly9kpfn6hy294ava8795wy5z9l1bnl98hhhv8kn9naf4camdg"; depends=[]; }; forward = derive2 { name="forward"; version="1.0.3"; sha256="0swn5ysp3f660kl9jpmkck9324j1g3yhj2hl238rfrcr5wihxifc"; depends=[MASS]; }; forwards = derive2 { name="forwards"; version="0.1.0"; sha256="0pb101gdf2a4plalhhm34aixkss3lzfg8yj6yfi0d6khjmaza33i"; depends=[]; }; @@ -6207,7 +6346,7 @@ in with self; { fourierin = derive2 { name="fourierin"; version="0.2.2"; sha256="0hy033bzybdc214z10wnbqph5f83fsr13admnzwb1d2drpbljnc8"; depends=[Rcpp RcppArmadillo]; }; fpCompare = derive2 { name="fpCompare"; version="0.2.1"; sha256="0vva60xixlx6l8623qvj2sdn5w3gjscrv5g8hqmgir4f211lzg38"; depends=[]; }; fpa = derive2 { name="fpa"; version="1.0"; sha256="0kgpl9qq0l10h0vdd2f8vnir0kdylh1jvvv5z4d9ygj1pl9qywhk"; depends=[fields reshape]; }; - fpc = derive2 { name="fpc"; version="2.1-10"; sha256="15m0p9l9w2v7sl0cnzyg81i2fmx3hrhvr3371544mwn3fpsca5sx"; depends=[class cluster diptest flexmix kernlab MASS mclust mvtnorm prabclus robustbase trimcluster]; }; + fpc = derive2 { name="fpc"; version="2.1-11"; sha256="04alsqb5gbhsjg1000d8w52pmpnlwca29r0s12f7n7mdccdv6xar"; depends=[class cluster diptest flexmix kernlab MASS mclust mvtnorm prabclus robustbase trimcluster]; }; fpca = derive2 { name="fpca"; version="0.2-1"; sha256="13b102026xlfb7c2rb3xsqsymm7xpmaxppaafjkb5dx0b1lz0jrc"; depends=[sm]; }; fpest = derive2 { name="fpest"; version="0.1.1"; sha256="013r8295spm02j558aqvnrnbkg2g73gl5vi4lqzngbw8yr8qlkri"; depends=[]; }; fpmoutliers = derive2 { name="fpmoutliers"; version="0.1.0"; sha256="108bp3smk9jnckd5237xly4ywmal03rq1kidq5z61l6zrhc3yfh9"; depends=[arules doParallel foreach Matrix pmml pryr R_utils XML]; }; @@ -6217,13 +6356,13 @@ in with self; { fptdApprox = derive2 { name="fptdApprox"; version="2.1"; sha256="00vxwcwca7zfm4fr0x9898snr6j0474ci1bahjmpj2jxiclwnhzs"; depends=[]; }; fracdiff = derive2 { name="fracdiff"; version="1.4-2"; sha256="03l5dqpqwwi5c8fwc2vissfawcsignai60h2zalknkibvk782dwq"; depends=[]; }; fracprolif = derive2 { name="fracprolif"; version="1.0.6"; sha256="1cpb71yk1245j6qz4mqvpqc3s3lrmav4blp5wlxasjizn3ilwh66"; depends=[emg numDeriv]; }; - fractal = derive2 { name="fractal"; version="2.0-1"; sha256="1varigsw5chwz88dgipdg55fqfarvll3s7kcyqmhfm0wc7vvmz2q"; depends=[ifultools MASS sapa scatterplot3d splus2R wmtsa]; }; + fractal = derive2 { name="fractal"; version="2.0-4"; sha256="18lr9z0gslvfc3z8vyj3krqj3bfhg60zv1fzinrwwkc4cpk1w7mp"; depends=[ifultools MASS sapa scatterplot3d splus2R wmtsa]; }; fractaldim = derive2 { name="fractaldim"; version="0.8-4"; sha256="0fln4qn0d79agnnlzi8b9g9qn90zynq1cg9v5isiyi71345v45nr"; depends=[abind]; }; fractalrock = derive2 { name="fractalrock"; version="1.1.0"; sha256="15f4w8hq3d8khgq269669ri16qxhar9646w40cw7wzh79r9gpf00"; depends=[futile_any futile_logger quantmod timeDate]; }; fractional = derive2 { name="fractional"; version="0.1.3"; sha256="1jz83y53s0xdphh1z3v3z7xhcmhx7rp0iiazw2vdsx2747r3rirn"; depends=[Rcpp]; }; fragilityindex = derive2 { name="fragilityindex"; version="0.1.0"; sha256="06f7w0ff8mmydgylz5a0z29fc78spvmay3sjq0rz9k44w4bb9z3q"; depends=[pbapply stringr survival]; }; - frailtyEM = derive2 { name="frailtyEM"; version="0.7.9"; sha256="1bgsp4jkwl03c2ddvhc7xx8lzr22gw81fk58z0lfxknsgvajb9sp"; depends=[expint ggplot2 magrittr msm Rcpp survival tibble]; }; - frailtyHL = derive2 { name="frailtyHL"; version="1.1"; sha256="1xjdph0ixanf9w4b6hx6igfhkcp8h93sclrg0pgqgmbvm41lhb1x"; depends=[Matrix numDeriv survival]; }; + frailtyEM = derive2 { name="frailtyEM"; version="0.8.3"; sha256="02nsq5zjxg1hg578jn6ihygvyzscisx8r0s14a51dq1v6cjrz402"; depends=[expint ggplot2 magrittr Matrix msm Rcpp survival tibble]; }; + frailtyHL = derive2 { name="frailtyHL"; version="2.1"; sha256="02vk1hwjpdwdajy527q034dpvnchsnwhqqlf6nq19wqhxq7355qj"; depends=[cmprsk Matrix numDeriv survival]; }; frailtySurv = derive2 { name="frailtySurv"; version="1.3.2"; sha256="0qsq96p29rxlfkhbmg8cfqdnpzh8wq2nadpiim9d6l0bs20r51gl"; depends=[ggplot2 nleqslv numDeriv Rcpp reshape2 survival]; }; frailtypack = derive2 { name="frailtypack"; version="2.12.6"; sha256="0w2v5ik4ryvl5hph9cwxcrrglwpqbyirfrayyw9g0l1wdc1mfvi4"; depends=[boot MASS nlme statmod survC1 survival]; }; frair = derive2 { name="frair"; version="0.5.100"; sha256="1j557dqvc5xiz7xbl4h7vp55pc3hly8ci01qy36p02vlxhzf4hj3"; depends=[bbmle boot lamW]; }; @@ -6238,7 +6377,7 @@ in with self; { freqdom_fda = derive2 { name="freqdom.fda"; version="0.9.1"; sha256="15wq9s3v441dybc8kglpbv9hdvsr9rjjq4qp4d2ipxglfp0iqj9p"; depends=[fda freqdom mvtnorm]; }; freqparcoord = derive2 { name="freqparcoord"; version="1.0.1"; sha256="011p8xh0i0x0w5rv5qz5a7fxwdhxd8l2bqi9bxv5almxd0y7ajqx"; depends=[FNN GGally ggplot2 mvtnorm]; }; frequencies = derive2 { name="frequencies"; version="0.1.1"; sha256="0d52kf4r13n59990xhra9i6gfvs4sn7ix54d0c0g56p1rj7hnh79"; depends=[dplyr]; }; - frequencyConnectedness = derive2 { name="frequencyConnectedness"; version="0.1.6"; sha256="06lqy1w3j0k3wddazk9a8pj076sjpr986756cx2z11s6a9j4pkfx"; depends=[urca vars]; }; + frequencyConnectedness = derive2 { name="frequencyConnectedness"; version="0.2.0"; sha256="02ha5jfkjaxyfp7x1h0xx32ijha2dh7h52z687a9y9azrqvjv0jp"; depends=[knitr pbapply urca vars]; }; freqweights = derive2 { name="freqweights"; version="1.0.4"; sha256="1iy2vzv4wc2883yq8r31wpspa7gm7cd4wkgvbh7mwafll463zni2"; depends=[biglm data_table dplyr FactoMineR fastcluster plyr]; }; frm = derive2 { name="frm"; version="1.2.2"; sha256="1dl0vca9r2dams99sc13pfpi0b3yb02x59f4c1jz07zz005c8l23"; depends=[]; }; frmhet = derive2 { name="frmhet"; version="1.1.3"; sha256="07sgsfhzrci8g1b0gicjfca1mgd8ppfqpkpp4q9bdxnjvdvlf45s"; depends=[]; }; @@ -6248,11 +6387,13 @@ in with self; { frontier = derive2 { name="frontier"; version="1.1-2"; sha256="1vpjd57cc6niwqibhz1ib46zj57d5a9m40yaq7kr9awk9di65ryz"; depends=[Formula lmtest micEcon miscTools moments plm]; }; frontiles = derive2 { name="frontiles"; version="1.2"; sha256="08qq25wbylvhvmq34wggyj0hwdlxfs9rfs8gjqsrg50xccchniqi"; depends=[classInt colorspace rgl sp]; }; frt = derive2 { name="frt"; version="0.1"; sha256="1qy76a1wkznaqzlyj1nq74mf1pnyly1s8gnff8q30zfccqk68cxv"; depends=[]; }; - fscaret = derive2 { name="fscaret"; version="0.9.4.1"; sha256="19g0vcgbq3l9b9x264jg5q17lrky7xrznc8wjxkvnjqdykjmzjhp"; depends=[caret gsubfn hmeasure]; }; + fs = derive2 { name="fs"; version="1.1.0"; sha256="1rcpji6qygjm75y51gb6x0vg0fjnvkl3x734d6dgd50xal59blb9"; depends=[Rcpp]; }; + fscaret = derive2 { name="fscaret"; version="0.9.4.2"; sha256="08lrkxkfraw67dhcpg53dg1w7lpxzpqhz0l71vpn21xlk8iqgjw8"; depends=[caret gsubfn hmeasure]; }; + fsdaR = derive2 { name="fsdaR"; version="0.2-21"; sha256="121khfqy1ixqp86cl3cngc40zxjpd4nm5k0lk558nxcfgyyzvx8y"; depends=[rJava robustbase]; }; fsia = derive2 { name="fsia"; version="1.1.1"; sha256="0id7cnswrqylgpwjil1zfn89ryrdpl20fim8x1srl8s1hm5bg35r"; depends=[]; }; - fslr = derive2 { name="fslr"; version="2.12"; sha256="1ivjza08qxa8dfgyvcikrggivzd1kb2anqj907hj5g8rsqfjdrrs"; depends=[matrixStats neurobase oro_nifti R_utils]; }; + fslr = derive2 { name="fslr"; version="2.17.3"; sha256="1g7z1jsj89kqyclb3qdc7c6dgn18jqjmrxpxi62llkixhqg21yha"; depends=[matrixStats neurobase oro_nifti R_utils]; }; fso = derive2 { name="fso"; version="2.0-1"; sha256="02dr12bssiwn8s1aa1941hfpa4007gd65f3l4s74gs2vgjzdxf8s"; depends=[labdsv rgl]; }; - fst = derive2 { name="fst"; version="0.7.2"; sha256="1y2yzx8bwn747vibi0dds1m1rwyy588nppvbgp4bars1w3h4pps5"; depends=[data_table Rcpp]; }; + fst = derive2 { name="fst"; version="0.8.4"; sha256="1jarhz5c6bib4n3xms1xhgybzaqdf4llfbgmnqndz2gwxjx1igia"; depends=[Rcpp]; }; fsthet = derive2 { name="fsthet"; version="1.0.0"; sha256="10mimnlq01q0mmaljfp27iq0pv11znbcv3mah57nrwpy0a3zqwhb"; depends=[]; }; ftDK = derive2 { name="ftDK"; version="1.0"; sha256="1xs2rr2afjza97kpym5zkas3k78pilxjlh7lp1gc66banldr71g2"; depends=[dplyr httr pbapply purrr tibble]; }; ftnonpar = derive2 { name="ftnonpar"; version="0.1-88"; sha256="0df9zxwjpfc939ccnm1iipwhpf76b34v0x74nsi1mm1g927dfl0i"; depends=[]; }; @@ -6262,22 +6403,23 @@ in with self; { fueleconomy = derive2 { name="fueleconomy"; version="0.1"; sha256="1svy5naqfwdvmz98l80j38v06563vknajisnk596yq5rwapl71vj"; depends=[]; }; fugeR = derive2 { name="fugeR"; version="0.1.2"; sha256="0kd90s91vzv0g3v9ii733h10d8y6i05lk21p5npb3csizqbdx94l"; depends=[Rcpp snowfall]; }; fullfact = derive2 { name="fullfact"; version="1.2"; sha256="13729m2s8b32d9i9c6g2r0zkcqsw9p7nhdig8isarfn4bjzqhf71"; depends=[afex lme4]; }; - fulltext = derive2 { name="fulltext"; version="0.1.8"; sha256="14gvhjc9433hnb5dh88svxyahbcv968njxjfwgc5ii9lpcpw5935"; depends=[aRxiv digest httr jsonlite magrittr R_cache rcrossref rentrez rplos rredis tm whisker xml2]; }; + fulltext = derive2 { name="fulltext"; version="1.0.1"; sha256="08pwasz1rpnnq81mvaldjiqv79wbvw5ma89skk95h0k2pbahblka"; depends=[aRxiv crminer crul data_table hoardr httr jsonlite magrittr microdemic pdftools rcrossref rentrez rplos storr tibble whisker xml2]; }; fun = derive2 { name="fun"; version="0.1-0"; sha256="0z4nq2w1wz1clc7cf87pf870hayxq5mpzhllfgwj4mmh2xpphnrf"; depends=[]; }; funData = derive2 { name="funData"; version="1.1"; sha256="0qr3rwa4z6173px9wqb17wcdfsnjgfqvfwwpzi8sldgmvq3l7dfg"; depends=[abind fields foreach]; }; funFEM = derive2 { name="funFEM"; version="1.1"; sha256="08798lvryykrxfvp2297anzl4gi81gwvc1qyyzq16nafjf65kwfy"; depends=[elasticnet fda MASS]; }; funHDDC = derive2 { name="funHDDC"; version="1.0"; sha256="038m64yv27wz7ki2gcn94q011p8mv0ggmli5n27y0f5bnkfh6d6w"; depends=[fda]; }; - funModeling = derive2 { name="funModeling"; version="1.6.5"; sha256="0vmkfn2nv6iynadmlv37wxcyazfknjxzk485hl12a7d9rj2nhqfd"; depends=[dplyr ggplot2 gridExtra Hmisc lazyeval moments pander RColorBrewer reshape2 ROCR scales]; }; + funModeling = derive2 { name="funModeling"; version="1.6.7"; sha256="0blanw0aw7qvcs6a8ryaqvi322gaz65g6flijkbssf681im9pmjr"; depends=[dplyr entropy ggplot2 gridExtra Hmisc lazyeval moments pander RColorBrewer reshape2 ROCR scales]; }; + funbarRF = derive2 { name="funbarRF"; version="1.0.1"; sha256="05smi717j4zhbrfqjyvx1rzckygigg1x8c6kb3brbpv8w33gcvx7"; depends=[BioSeqClass Biostrings bold randomForest]; }; funchir = derive2 { name="funchir"; version="0.1.4"; sha256="1mbsy65628q117c2k01wvibpjd3ibigy4yc1c8m0rf9jwsc67qjb"; depends=[data_table]; }; functional = derive2 { name="functional"; version="0.6"; sha256="120qq9apg6bf39n9vnp68db5rdhwvnj2vi12a8j8243vq8kqxdqr"; depends=[]; }; functools = derive2 { name="functools"; version="0.2.0"; sha256="0g62jdia3n09vq8mx1m2r4nl3jfcadzpym0wkldzzzjcfs90vl6b"; depends=[]; }; funcy = derive2 { name="funcy"; version="0.8.6"; sha256="0wlcwwmv92djj35i7nnfns5l79fca6hsfrjxgsqmwgjb28gy19bs"; depends=[calibrate car caTools cluster fda fields flexclust kernlab MASS Matrix plyr sm wavethresh]; }; fungible = derive2 { name="fungible"; version="1.5"; sha256="1f4q26rfl7d35ng5nx11mzzv9fhk4zg62j63c59i649wcx1xsan9"; depends=[e1071 lattice MASS mvtnorm nleqslv R2Cuba stringr]; }; funr = derive2 { name="funr"; version="0.3.2"; sha256="11mjd1ba9kwawh7k5py54mkq4g1df79d7qivan8fj11qfwfzm679"; depends=[]; }; - funrar = derive2 { name="funrar"; version="1.2.0"; sha256="0dsp3aldvnc7lkp6sl89p0i7yga7wvjvl77zkjgjhxwpr8a2ry22"; depends=[cluster dplyr]; }; + funrar = derive2 { name="funrar"; version="1.2.1"; sha256="0zhrn0s75p4fnjwn2779avhlzg5y3in2il2s1qaaiq3mj368vpmn"; depends=[cluster dplyr]; }; funreg = derive2 { name="funreg"; version="1.2"; sha256="199zvqali0sb0z4yp20rm5da0kd7z3rgv47g1cb1apsbcw0cq51n"; depends=[MASS mgcv mvtnorm]; }; - funtimes = derive2 { name="funtimes"; version="4.0"; sha256="0a0xpybalk38p3n0fd5f3g4yav99j6ck03d1pkx0w2yqqxnviqhw"; depends=[dbscan Jmisc Kendall]; }; - furniture = derive2 { name="furniture"; version="1.7.2"; sha256="07kbfjipx5cg4fxb7qqbg9i2rv81x5rg1zisqb7cy36dkh4svv51"; depends=[knitr]; }; + funtimes = derive2 { name="funtimes"; version="5.0"; sha256="0xq0n3939rsrz7dna4d3d7mrpxad2xswnblsc4a88nbq6cmx5c70"; depends=[dbscan Jmisc Kendall]; }; + furniture = derive2 { name="furniture"; version="1.7.3"; sha256="1bayp2cfd3vacy83jf9x5l2kp4dr2kvfx9zvmw7z2z03lfmjj841"; depends=[knitr]; }; fuser = derive2 { name="fuser"; version="1.0.0"; sha256="0l2ddc3lal3gvzkn8b09i7pzd9nvqnr45naz3ni52nmgygwdk5ma"; depends=[glmnet irlba Matrix Rcpp RcppEigen RSpectra]; }; fusionclust = derive2 { name="fusionclust"; version="1.0.0"; sha256="1h03nlk4gnz4j5h2h5bxazkka2qq983h7nglm1ghzqvbqjk6sv37"; depends=[bbmle]; }; futile_any = derive2 { name="futile.any"; version="1.3.2"; sha256="09z12dlj7cnkfwnmgsjknsghirv1cry83w4a9k4d0w5a1jnlr5jg"; depends=[lambda_r]; }; @@ -6286,16 +6428,18 @@ in with self; { futile_options = derive2 { name="futile.options"; version="1.0.0"; sha256="1hp82h6xqq5cck67h7lpf22n3j7mg3v1mla5y5ivnzrrb7iyr17f"; depends=[]; }; futile_paradigm = derive2 { name="futile.paradigm"; version="2.0.4"; sha256="14xsp1mgwhsawwmswqq81bv6jfz2z6ilr6pmnkx8cblyrl2nwh0v"; depends=[futile_options RUnit]; }; futility = derive2 { name="futility"; version="0.2"; sha256="0njckhwmawqhiznv241yjghh99wl72c4xknp9nzbmvi5j575rnlh"; depends=[]; }; - future = derive2 { name="future"; version="1.6.2"; sha256="01dg2rk9vdsd1mihljghwspisv6f15mv9gc0q52gykpx8qvniqi1"; depends=[digest globals listenv]; }; + future = derive2 { name="future"; version="1.7.0"; sha256="0lfzw53z1d4bksishjkmwphfkgdr6zpvnpwr1jx8dsj0b1y2laiq"; depends=[digest globals listenv]; }; future_BatchJobs = derive2 { name="future.BatchJobs"; version="0.15.0"; sha256="0r1bnp9mnv8jk9d6dpr94cqn4zihpm7cgxqj0c3l0x9b6i0ny3z2"; depends=[BatchJobs future R_utils]; }; + future_apply = derive2 { name="future.apply"; version="0.1.0"; sha256="1c5jyklam5j9lmr5jmn6972wwlbyaaihy4kczxib87glmc4g0a4k"; depends=[future globals]; }; future_batchtools = derive2 { name="future.batchtools"; version="0.6.0"; sha256="0npvy8d927k3ilmnwcq1fh5lvpdr009pyc93ils5qhwhfma3wfh0"; depends=[batchtools future]; }; + future_callr = derive2 { name="future.callr"; version="0.2.0"; sha256="0b6f7iwx3pa6fdvb9zrzmx7ak94bgmscswyvinaysjxxcyfkmym2"; depends=[callr future]; }; futureheatwaves = derive2 { name="futureheatwaves"; version="1.0.3"; sha256="122b2z86bzxfch67y6cpq8wj62mw0dgkzbmnpwi247kdx7w5mw1f"; depends=[data_table dplyr ggplot2 ggthemes leaflet Rcpp stringr tidyr]; }; fuzzr = derive2 { name="fuzzr"; version="0.2.1"; sha256="10f9qd7cn0sqk02b5p1iq9prf5kjdivn0fkky4lb7chqvk2cwbv5"; depends=[assertthat progress purrr]; }; fuzzyFDR = derive2 { name="fuzzyFDR"; version="1.0"; sha256="0zd8i9did0d9gp42xjmwrccm32glabvvy08kl8phhwb1yaq53h7w"; depends=[]; }; fuzzyRankTests = derive2 { name="fuzzyRankTests"; version="0.3-10"; sha256="1xj5xsm2s4ylv3b8v80qny201iddjym07h8d50asas7xy1k7945z"; depends=[]; }; - fuzzyforest = derive2 { name="fuzzyforest"; version="1.0.4"; sha256="1fxspavvr0d7pisba76y0rvr6dkgvfjlypc9cq76qqlylgvzz5wn"; depends=[doParallel doRNG foreach ggplot2 mvtnorm randomForest]; }; + fuzzyforest = derive2 { name="fuzzyforest"; version="1.0.5"; sha256="1ifhvdzn0rs8gxqmpz8w1prxg3pxs5jqx5lh0r4i5rai49qjy3sb"; depends=[doParallel doRNG foreach ggplot2 mvtnorm randomForest]; }; fuzzyjoin = derive2 { name="fuzzyjoin"; version="0.1.3"; sha256="16l2vwx5yxwbm7lhb4a1ypgx8kl2rrdc02qkh59lblhzya1jiid8"; depends=[dplyr geosphere purrr stringdist stringr tidyr]; }; - fuzzywuzzyR = derive2 { name="fuzzywuzzyR"; version="1.0.1"; sha256="1w4cr41w876wf6jb413axlk147jpgjc1mjvpghbkmq4kaplwjcr0"; depends=[R6 reticulate]; }; + fuzzywuzzyR = derive2 { name="fuzzywuzzyR"; version="1.0.2"; sha256="08pgyyihc1m4myl10l07vw45lisw36aaypyh5fv9zzm3lw6w6w36"; depends=[R6 reticulate]; }; fwdmsa = derive2 { name="fwdmsa"; version="0.2"; sha256="0p0kh8am6gajfaixkvq61f12hfbm6chl9372yzn1yilhiyvqdxgp"; depends=[]; }; fwi_fbp = derive2 { name="fwi.fbp"; version="1.7"; sha256="1wk9cr0kk6zkbf111bv87n7b1wwx1qrsbjxydvbjvy8bgz0nfa62"; depends=[]; }; fwsim = derive2 { name="fwsim"; version="0.3.3"; sha256="1ix4sl2krlr0b0wfgvy73qhpmkjymqcci3q3v60j20zapi55gxn2"; depends=[Rcpp]; }; @@ -6304,28 +6448,27 @@ in with self; { g2f = derive2 { name="g2f"; version="0.1"; sha256="1njx03hnfvzqyzhyjg5zwikv36xggss2vc82vpfybg6rqkx3rqbd"; depends=[KEGGREST minval sybil]; }; gCat = derive2 { name="gCat"; version="0.1"; sha256="10990ilsjk52kqkcdngj4nq0kcbn4w1syxl1mqjq2n5g1l002yjy"; depends=[]; }; gIPFrm = derive2 { name="gIPFrm"; version="3.1"; sha256="08rfdac442picbw1r3xyxjzf2dc57svg44am0714z4r72mshvj04"; depends=[]; }; - gLRTH = derive2 { name="gLRTH"; version="0.1.0"; sha256="0a4vcfb54sqbk43gp397dwc02701wzsf4sxq2r121m2amad79nl5"; depends=[]; }; - gMCP = derive2 { name="gMCP"; version="0.8-11"; sha256="1zq8qwp6ib0gqvds4s7kb55xqgd562r8bh66r5x22j20brz41k2v"; depends=[CommonJavaJars JavaGD MASS Matrix multcomp mvtnorm PolynomF rJava xlsxjars]; }; + gLRTH = derive2 { name="gLRTH"; version="0.2.0"; sha256="1drmmr576n3pbr0q1cnnx4k7r4iz061n2cizv1kpr3wcc1g291pn"; depends=[]; }; + gMCP = derive2 { name="gMCP"; version="0.8-13"; sha256="19chbcqiw13rppp7s7y8vf42spwnna78xl2mb37n96s23fpj3qpf"; depends=[CommonJavaJars JavaGD MASS Matrix multcomp mvtnorm PolynomF rJava xlsxjars]; }; gMOIP = derive2 { name="gMOIP"; version="1.1.0"; sha256="122yzwicsq7q98x5dxk1mmf148v2w64jz3pd3535himx85gy9zy3"; depends=[ggplot2 ggrepel]; }; gMWT = derive2 { name="gMWT"; version="1.1"; sha256="1ws96x3vjswh6m6s9zn3r9gp7xp6ybdkkxsq9a73ng2zqz2qjdl0"; depends=[clinfun Rcpp RcppArmadillo]; }; gPCA = derive2 { name="gPCA"; version="1.0"; sha256="1ylb1d24dxnzpws9bbanwhyizjr3ljky2bhrph4c5yaq0zwwbrkw"; depends=[]; }; gPdtest = derive2 { name="gPdtest"; version="0.4"; sha256="00dlhnklfg2yp4hp7yjgr2nfswv22c007xq1mxdbkll62zgd94mq"; depends=[]; }; - gProfileR = derive2 { name="gProfileR"; version="0.6.1"; sha256="1qix15d0wa9nspdclcawml94mng4qmr2jciv7d24py315wfsvv8p"; depends=[plyr RCurl]; }; + gProfileR = derive2 { name="gProfileR"; version="0.6.4"; sha256="1cka02zbz1rbppm782qpxk1xn9qxbrv2gp5rgf970j906hxm2y0b"; depends=[plyr RCurl]; }; gRain = derive2 { name="gRain"; version="1.3-0"; sha256="0xb746pyh8k8w1a8nz7z41bflx5xr0cqdq5l5wj7j464zv2cw6jy"; depends=[functional graph gRbase igraph magrittr Rcpp RcppArmadillo RcppEigen]; }; - gRapHD = derive2 { name="gRapHD"; version="0.2.4"; sha256="0fxd04s6zh23chks4k6nwb5w408xjy89b44pa42kv6qnqj86ylvm"; depends=[graph]; }; gRapfa = derive2 { name="gRapfa"; version="1.0"; sha256="07yzwzna9pdyzndxk6wwyl6v3gkfc7dvy1ixmdl3d38mcl1ahwyq"; depends=[igraph]; }; gRbase = derive2 { name="gRbase"; version="1.8-3"; sha256="143qvs5mwypswdq344a48kzn83sx9jskdr9w6kxa3fzhdcqlhi7d"; depends=[graph igraph magrittr Matrix RBGL Rcpp RcppArmadillo RcppEigen]; }; gRc = derive2 { name="gRc"; version="0.4-2"; sha256="0cqc3s7a1njxzmnx7yx1yjkrazbai3gpw2kc4l7g49ld4j40bsln"; depends=[gRbase MASS]; }; gRim = derive2 { name="gRim"; version="0.2-0"; sha256="0ihl4vsnp6xkcpcf37p2xcqnbvyvjamcz5060f1kirn8xzwzq29y"; depends=[gRain graph gRbase igraph Rcpp RcppArmadillo]; }; gSEM = derive2 { name="gSEM"; version="0.4.3.4"; sha256="18kh41ibvfflz59gykiq7j2c6a72i8b0w8c2mcprd1nzhnyhvmhy"; depends=[DiagrammeR htmlwidgets knitr MASS]; }; gSeg = derive2 { name="gSeg"; version="0.4"; sha256="0fcjhf8hznh1rzyfrk3f3hy16zs1n61b7r3j90pzg873razf97a2"; depends=[]; }; - gTests = derive2 { name="gTests"; version="0.1"; sha256="19037qn7q92dykry4wrnbdg7irkzk2vwz1j0kq2r836m03bs04nc"; depends=[]; }; + gTests = derive2 { name="gTests"; version="0.2"; sha256="1h1sd8mrzcniq7rx7frdlxwpnsn8lifng1x99fqq703hs3znl1yq"; depends=[ade4]; }; gWQS = derive2 { name="gWQS"; version="1.0.0"; sha256="0n0zwfqz5g4js5y3ss64dv5842jypr6sqacs32ax37immd34slhq"; depends=[ggplot2 Rsolnp tableHTML ztable]; }; gWidgets = derive2 { name="gWidgets"; version="0.0-54"; sha256="13lbbbnmkvb559klgsnz0q27qlyv102xakb6yccxsxjw249hm8c2"; depends=[]; }; gWidgets2 = derive2 { name="gWidgets2"; version="1.0-7"; sha256="02jrv5x7s3jm2ajpdvgsp4zkn65gjy96rvgdxhf9smp1kb6llzg0"; depends=[digest]; }; - gWidgets2RGtk2 = derive2 { name="gWidgets2RGtk2"; version="1.0-6"; sha256="1lv0vf1nchkx8v8464ijdmqlpw6y00f07ipx7a4pkii9ai9qv2pw"; depends=[gWidgets2 memoise RGtk2]; }; + gWidgets2RGtk2 = derive2 { name="gWidgets2RGtk2"; version="1.0-7"; sha256="14c933j0wj3lb5da75zxg3w3mfqh0nqk8rczbi4dnqd8sna6jks9"; depends=[gWidgets2 memoise RGtk2]; }; gWidgets2tcltk = derive2 { name="gWidgets2tcltk"; version="1.0-5"; sha256="1g0p7bl76rkkrixzw4b1s99gyvi8b5a4vbnsj2wmy7y9grbzndkm"; depends=[digest gWidgets2 memoise]; }; - gWidgetsRGtk2 = derive2 { name="gWidgetsRGtk2"; version="0.0-84"; sha256="0rn8v9cjziq1xm3w67nii4763w450n49jm253glpk9pvzxdkxhna"; depends=[cairoDevice gWidgets RGtk2]; }; + gWidgetsRGtk2 = derive2 { name="gWidgetsRGtk2"; version="0.0-85"; sha256="0qxfpajs7a5bv057x743ha8gpvgkg6qxpjdayr45264i64ygfwn0"; depends=[cairoDevice gWidgets RGtk2]; }; gWidgetstcltk = derive2 { name="gWidgetstcltk"; version="0.0-55"; sha256="06991rqh4927bal7j718bn2ziy6rws8yq682lmp5vbqhdd36afv2"; depends=[digest gWidgets]; }; gafit = derive2 { name="gafit"; version="0.5.1"; sha256="160z3cv22prf7118447dla9g1gimwkfad8zdil3fg8n4l22rk51a"; depends=[]; }; gaiah = derive2 { name="gaiah"; version="0.0.2"; sha256="1qc3crjxramyxl86dp8mcmvskixny7x6ji0jqf5dqf5r5qc7zrs9"; depends=[dplyr geosphere ggplot2 lazyeval magrittr maptools raster rgeos sp stringr tidyr]; }; @@ -6335,32 +6478,31 @@ in with self; { gamCopula = derive2 { name="gamCopula"; version="0.0-4"; sha256="1nj5pxcbr6k7k1m44ky306yycpx20pw8awlx7lzyw1rx1hrv5ivb"; depends=[copula doParallel foreach gsl igraph MASS mgcv numDeriv VineCopula]; }; gamRR = derive2 { name="gamRR"; version="0.3.0"; sha256="07zgh6hxkqxrw5da1pbscl8z8hzbgc5ipkzmpimimxa0i9g04c4h"; depends=[boot mgcv]; }; gamair = derive2 { name="gamair"; version="1.0-0"; sha256="13n2n4b7givzvia93awy7ym0gihl4lr08w3a6ny2pq0f3zbhzw97"; depends=[]; }; - gambin = derive2 { name="gambin"; version="2.1.1"; sha256="023fmbn1c0zjyvb6b3x4c3wx60qs27i8vi5n4nr0shsamwr7cp6h"; depends=[doParallel foreach gtools]; }; + gambin = derive2 { name="gambin"; version="2.3.0"; sha256="1kwh8s191m6gsjczqc3svf6zp1k4zi86rqz7s94rahg84vwh6a9b"; depends=[doParallel foreach gtools]; }; gamboostLSS = derive2 { name="gamboostLSS"; version="2.0-0"; sha256="0z9wzvxjhnjl2bjnd5pxqzvv43hak7x5m23j76qnm05j12vw4bz1"; depends=[mboost stabs]; }; gamboostMSM = derive2 { name="gamboostMSM"; version="1.1.87"; sha256="0if0x92lch57ksll8d5i3jzk0kh40593b20c17g3hvc33920c7r0"; depends=[mboost]; }; gamclass = derive2 { name="gamclass"; version="0.56"; sha256="13gy8ys69dkhm54x3vcpqblq4j2hkbsnaswzcq0v0saqd9b1shcs"; depends=[ape car DAAG KernSmooth lattice latticeExtra MASS mgcv randomForest rpart]; }; games = derive2 { name="games"; version="1.1.2"; sha256="01hbbr2hsxi5j9axpdl0jihpd55pa9hacjxmab8p7cixk3xqqqbf"; depends=[Formula MASS maxLik stringr]; }; gamesGA = derive2 { name="gamesGA"; version="1.1.3.2"; sha256="0srxsm1zhrx1dpm94mkcsds6rwkx9gi9yfbrkzylhrxgi4g8pvwp"; depends=[shiny]; }; - gamlr = derive2 { name="gamlr"; version="1.13-3"; sha256="05hxmhmgs83q6d5jhq9y5b5llk1pi2jf61286pmnwbzmdwdhrbr2"; depends=[Matrix]; }; - gamlss = derive2 { name="gamlss"; version="5.0-5"; sha256="1r911xd6hc87mizdzj11hyfmlc5b79sgkc9y567nxqp5g553n0cn"; depends=[gamlss_data gamlss_dist MASS nlme survival]; }; + gamlr = derive2 { name="gamlr"; version="1.13-4"; sha256="08igzs2raz6nnkz2aisxaq9jy2mlb49cqlm6gwxp0mrag4q6xxrz"; depends=[Matrix]; }; + gamlss = derive2 { name="gamlss"; version="5.0-6"; sha256="1gwnp3i7458ms79fqi7pyna6adh0hz2jjigyxgdz98vxh39ix5ps"; depends=[gamlss_data gamlss_dist MASS nlme survival]; }; gamlss_add = derive2 { name="gamlss.add"; version="5.0-1"; sha256="1agk6pfm04hf9dp5r6dvxqkj1hykx23a16q7vch2sg752z0dadgk"; depends=[gamlss gamlss_dist mgcv nnet rpart]; }; gamlss_cens = derive2 { name="gamlss.cens"; version="4.3-5"; sha256="06baf94kpprj03dggnyvvmi4nw3qa23cyy1crsa0zfnaqj915ypv"; depends=[gamlss gamlss_dist survival]; }; gamlss_data = derive2 { name="gamlss.data"; version="5.0-0"; sha256="1mqz7m4iksmx939bz1lq05cxz3bfcksn2ggw3cv7b0k98cykgg1s"; depends=[]; }; gamlss_demo = derive2 { name="gamlss.demo"; version="4.3-3"; sha256="01p6abppwbnh2a2ks1g08z4iwq2fxf125y9s4qzssybsn76a3gf3"; depends=[gamlss_dist gamlss_tr rpanel]; }; - gamlss_dist = derive2 { name="gamlss.dist"; version="5.0-3"; sha256="0gkqhb42avj3b8hmc3bnwlrjpi364ya6ca5vzxjli9844nzvvrfm"; depends=[MASS]; }; - gamlss_inf = derive2 { name="gamlss.inf"; version="1.0-0"; sha256="0n8d8q7ibin4q80js9b8qvxwjkb52xf9y33mmysq2sbl9652b22x"; depends=[gamlss gamlss_dist]; }; + gamlss_dist = derive2 { name="gamlss.dist"; version="5.0-4"; sha256="165ll56frlxka7iqix1anxdx6612gr62h7p0a27vi45yjbdj24id"; depends=[MASS]; }; gamlss_mx = derive2 { name="gamlss.mx"; version="4.3-5"; sha256="1jfs3ib2imwgazf8v23fa12iaflv0pm944bkqklx8qcljxp1lcs7"; depends=[gamlss gamlss_dist nnet]; }; gamlss_nl = derive2 { name="gamlss.nl"; version="4.1-0"; sha256="083l5lsb0csxcp4vffvdv2nr7jk3s2gkcavx66m8inzw16j7xilz"; depends=[gamlss survival]; }; - gamlss_spatial = derive2 { name="gamlss.spatial"; version="1.3.4"; sha256="08al70wjwb0w98ifhi8mphk332p1q92b5jxfbvam51k7m6s36i3s"; depends=[gamlss gamlss_add gamlss_dist mgcv spam]; }; + gamlss_spatial = derive2 { name="gamlss.spatial"; version="1.3.5"; sha256="192syg12qwhv9782spdg3sbpm2mfaj20bkr78h1ww64755srfc5k"; depends=[gamlss gamlss_add gamlss_dist mgcv spam]; }; gamlss_tr = derive2 { name="gamlss.tr"; version="5.0-0"; sha256="02akydpvwl1qkhxpr72lv9qp4z2ra69abyq51b57rh4p60g78vhm"; depends=[gamlss gamlss_dist]; }; gamlss_util = derive2 { name="gamlss.util"; version="4.3-4"; sha256="0p8lnwrn7cx97qnxls1x532f3ywszdyib2qiwx5qc7sam59h9c8j"; depends=[gamlss gamlss_dist zoo]; }; gamlssbssn = derive2 { name="gamlssbssn"; version="0.1.0"; sha256="1l8d4qwmq9dklm9imb3cvlncwa6jygf8kg2j1599h1nfhyyhj2vv"; depends=[gamlss gamlss_dist MASS]; }; gamm4 = derive2 { name="gamm4"; version="0.2-5"; sha256="11wblnh22xq3m3z25i30v2kd0zlf8wa3cm5z38z56rhk3l2wf5bc"; depends=[lme4 Matrix mgcv]; }; - gammSlice = derive2 { name="gammSlice"; version="1.3"; sha256="1vw8d0v0awyflh4gmbcf1g9nfx52cys8gpqvag5djri59p0y945a"; depends=[KernSmooth lattice mgcv]; }; + gamm4_test = derive2 { name="gamm4.test"; version="0.1.0"; sha256="0ab6rksr88fsv6whp6cxyshpv5ixmf9lw51cl3rzk870r8q326wg"; depends=[doParallel foreach gamm4 Matrix mgcv plotly RColorBrewer]; }; gamreg = derive2 { name="gamreg"; version="0.3"; sha256="1svrgbb8qdy2hzpq1g38v2lzmlbrn7qljix827biqzwgiajy69gg"; depends=[doParallel foreach glmnet Rcpp RcppArmadillo robustHD]; }; gamsel = derive2 { name="gamsel"; version="1.8-0"; sha256="0s29czlakix5ksblixcv7y5in5az9syzs2n71mqzf32vqgf8sf18"; depends=[foreach mda]; }; gaoptim = derive2 { name="gaoptim"; version="1.1"; sha256="04igpn73k6f6652y496igwypfxmz4igg4jgxx6swqyi37182rqhm"; depends=[]; }; - gap = derive2 { name="gap"; version="1.1-20"; sha256="0qwppkwk9qn3gbn85nqr0fgr1xfn6rq86i4fcj6g11mbs8ql0g7d"; depends=[]; }; + gap = derive2 { name="gap"; version="1.1-21"; sha256="0vslbk66h1gkpqrpj4pkxnx7nr1fnjp0zvym9cxzyxww797bd57s"; depends=[]; }; gap_datasets = derive2 { name="gap.datasets"; version="0.0.2"; sha256="0skxgiwymd8c4vsy2dbddifjj9a0bq52gdd2r62slsv0q9haw96y"; depends=[]; }; gapfill = derive2 { name="gapfill"; version="0.9.5-3"; sha256="1hwccvshz9z1zgjjrdk6iri272ih11cwpz91rldkpcwly6pqcwhk"; depends=[fields foreach ggplot2 quantreg Rcpp]; }; gapmap = derive2 { name="gapmap"; version="0.0.4"; sha256="0xz19n0vvdzbfg6afp3y0qfbs3f2nfxib1cyya3cax5wqqfbzw3i"; depends=[ggplot2 reshape2]; }; @@ -6368,7 +6510,7 @@ in with self; { gaselect = derive2 { name="gaselect"; version="1.0.5"; sha256="0xzx00n46x6x7w1xbx8nvabkkrna45pv1i70787m8h05q1yrjjij"; depends=[Rcpp RcppArmadillo]; }; gasfluxes = derive2 { name="gasfluxes"; version="0.2-1"; sha256="0cdqyyqb5dcn5978jmwmf06d9jcga5ma72zf3cdz72hbcil4f93k"; depends=[AICcmodavg data_table MASS sfsmisc]; }; gastempt = derive2 { name="gastempt"; version="0.4.01"; sha256="0jfk82yw7a95ih1s8ir432j79ix8vjbprwzr5fkzgykk07lfwm68"; depends=[assertthat BH dplyr ggplot2 nlme Rcpp RcppEigen rstan shiny StanHeaders stringr tibble]; }; - gaston = derive2 { name="gaston"; version="1.5"; sha256="1vlp0jfg35v79dya78h55a3pk6hj93i9hgb7x1mm6f54im0qzims"; depends=[Rcpp RcppEigen RcppParallel]; }; + gaston = derive2 { name="gaston"; version="1.5.3"; sha256="0y49rgsnzbikm1162awxlamjc2djnxqd9j8if9si4gbmkkp90iwm"; depends=[Rcpp RcppEigen RcppParallel]; }; gatepoints = derive2 { name="gatepoints"; version="0.1.3"; sha256="02qxxf4a6rl3l0jdgqxmzxfnqd9lh5i0q2knaxxsiz0nd74c1jg5"; depends=[]; }; gaussDiff = derive2 { name="gaussDiff"; version="1.1"; sha256="0fqjdxp2ibbami75ba16d02dz4rz5sk8mni45di9anydx44g9d45"; depends=[]; }; gaussfacts = derive2 { name="gaussfacts"; version="0.0.2"; sha256="095x7k7m7sy1gqkbm6wiqn26252dclz62sbnkv6cjvmbdxajl7m9"; depends=[]; }; @@ -6386,7 +6528,7 @@ in with self; { gcbd = derive2 { name="gcbd"; version="0.2.6"; sha256="1dvnly0aljv2c4x7sn3q55ncvfdfjfgp7w0k2900p77h4w8nixia"; depends=[DBI lattice Matrix plyr reshape RSQLite]; }; gcdnet = derive2 { name="gcdnet"; version="1.0.5"; sha256="159dl8v1n7s9wnfrjb6f0b3ssblkqgbfzs15vjxhc8xkz0jp9z1c"; depends=[Matrix]; }; gcerisk = derive2 { name="gcerisk"; version="17.10.17"; sha256="0l5yasy7bqmcah0fb3j8nafsb79f2s3wdb7jill9mwns00icb6sl"; depends=[cmprsk ggplot2 survival]; }; - gcite = derive2 { name="gcite"; version="0.8.1"; sha256="08kjpv65h26a7rr0ks6w1vvqsdgfd0xb61pgdbsng02hb9hs7gf5"; depends=[data_table httr pbapply rvest tm wordcloud xml2]; }; + gcite = derive2 { name="gcite"; version="0.9.2"; sha256="1xwnf8hsakzqg5nm5c14zw239scd2dl9rfd02mj5xp6548qwxrz9"; depends=[data_table httr pbapply rvest tm wordcloud xml2]; }; gclus = derive2 { name="gclus"; version="1.3.1"; sha256="02ba6zj9bjwrzykamjp40ajynx9xjx9h2i85n0ym0r5lcki4x6fn"; depends=[cluster]; }; gcmr = derive2 { name="gcmr"; version="1.0.0"; sha256="13xja7rh2wkmi2j7yxrkj99sl96mlcgkp3v5aagnz140jx3jibsx"; depends=[betareg car Formula geoR lmtest nlme sandwich sp]; }; gconcord = derive2 { name="gconcord"; version="0.41"; sha256="1n3pfwk6vip19q1zhbz1n164f9vi7mig8pcd07c4wxnm5ir9dagy"; depends=[]; }; @@ -6395,10 +6537,9 @@ in with self; { gdata = derive2 { name="gdata"; version="2.18.0"; sha256="0zwdj7lscgxr8r62ii8hbdh4mb7sa9w4f5nv32zzrxdvymcpya2b"; depends=[gtools]; }; gdimap = derive2 { name="gdimap"; version="0.1-9"; sha256="0ksbpcy739bvsiwis0pzd03zb4cvbd8d5wdf8whfn9k6mkj4x9rs"; depends=[abind colorspace geometry gridExtra gsl movMF oro_nifti rgl]; }; gdistance = derive2 { name="gdistance"; version="1.2-1"; sha256="1wygcx0iki7g10f9gjbycrjjadmsw3153ha9rnqvc9hwwf34m9y1"; depends=[igraph Matrix raster sp]; }; - gdm = derive2 { name="gdm"; version="1.3.4"; sha256="1z2g1gn8vxrcvyq5lw78wizilcq741ka9xf3isj2wxfhx9a8mqzi"; depends=[doParallel foreach raster Rcpp reshape2 vegan]; }; gdmp = derive2 { name="gdmp"; version="0.1.0"; sha256="1dlzxf17ssm10pw14mk5lk0plgav2mj8xf39dacyg9hlrz9pjwki"; depends=[]; }; gdns = derive2 { name="gdns"; version="0.2.1"; sha256="0dvrknhx0d00yi429zjdcs3ghgbpfjhrclkn6cicd049qdp4q396"; depends=[dplyr httr jsonlite purrr stringi tibble]; }; - gdpc = derive2 { name="gdpc"; version="1.0.2"; sha256="03gh69vb3zmsi7rlikl3a7vr7sar3x12d8lar2qa0nfksn0qa6dk"; depends=[doParallel foreach Rcpp RcppArmadillo xts zoo]; }; + gdpc = derive2 { name="gdpc"; version="1.0.3"; sha256="0qc9wl7zxqwzigvzpm0nyx735ah8ascmcwd0yays5mqc74iqqx3b"; depends=[doParallel foreach Rcpp RcppArmadillo xts zoo]; }; gds = derive2 { name="gds"; version="0.1.0"; sha256="0kc3l93640x8d6g3pa9gbr7ci5hmryg9i1nqpasgnvb6ixv6azbm"; depends=[]; }; gdtools = derive2 { name="gdtools"; version="0.1.6"; sha256="103wnc8sq0iwcnj4j14hd420d2dqdyf13s3f25icsznrlyzdkhf5"; depends=[Rcpp withr]; }; gear = derive2 { name="gear"; version="0.1.1"; sha256="1sqj9pz15j1v6fm4q2dp0zhdmy9zmmhmgxjwria5ihrp3b5hvwry"; depends=[lattice optimx sp]; }; @@ -6416,8 +6557,8 @@ in with self; { gemlog = derive2 { name="gemlog"; version="0.26"; sha256="1cbm9rd2zwih5glj5nkmavb27j21dhsrrrr1d0ss6faf00nprbfq"; depends=[signal]; }; gems = derive2 { name="gems"; version="1.1.1"; sha256="174mjnpldb0rwjvwdgpcg1acm526gs0pjf9gi5mn9d3x9yz4r5jx"; depends=[data_table MASS msm plyr]; }; gemtc = derive2 { name="gemtc"; version="0.8-2"; sha256="0c2a9gz6rvsc5qh66ixxa4dz6lwhcmmsf2vnvxl98c9kbvdwfqm9"; depends=[coda igraph meta plyr Rglpk rjags truncnorm]; }; - gemtc_jar = derive2 { name="gemtc.jar"; version="0.14.3"; sha256="18hbiygpsv67flc4v6z6mir0rfq41v1vsh11dg9phmdr8bx4kcl1"; depends=[rJava]; }; genBaRcode = derive2 { name="genBaRcode"; version="1.0.0"; sha256="0313kyhy9bg9rabxk2jdgxq2brhj2kkiq0xyd3mlq6j9c626pqi8"; depends=[ape Biostrings ggnetwork ggplot2 igraph network phangorn RColorBrewer reshape2 S4Vectors shiny ShortRead stringdist visNetwork]; }; + genBart = derive2 { name="genBart"; version="1.0.0"; sha256="0ykmpisp6s1bam09srn7zxrqv5ma55l5x143nj46y8lw91zhmi9n"; depends=[clValid data_table fastcluster ggplot2 gtools limma NMF pca3d psych qusage RColorBrewer reshape2 rmarkdown scales shiny shinydashboard shinyjs statmod stringr VennDiagram]; }; genMOSS = derive2 { name="genMOSS"; version="1.2"; sha256="18qinckzz7wsw222skrq30izbj6s85i8hq6iicj9nng8gh6jydr8"; depends=[ROCR]; }; genMOSSplus = derive2 { name="genMOSSplus"; version="1.0"; sha256="1n3ngx1piy3l14k5k95wrgvrjw9238jkygfqanl3xg2na2mmkr26"; depends=[]; }; genSurv = derive2 { name="genSurv"; version="1.0.3"; sha256="0k5rfpq603szjb76gxffvsbqcav8182h8zwvg4kar68k72yfw1xs"; depends=[]; }; @@ -6436,13 +6577,15 @@ in with self; { genemodel = derive2 { name="genemodel"; version="1.1.0"; sha256="1x6n6k9ifv2swhyrghvm6fsz5vh85cdik8225175i9msvmkh928n"; depends=[stringr]; }; genepi = derive2 { name="genepi"; version="1.0.1"; sha256="1whhdlq9p8gmygv7464hvfz6dhm65gqq1dqls6hgpmw822zxgbd5"; depends=[]; }; genepop = derive2 { name="genepop"; version="1.0.5"; sha256="17s3azcq1fjjqi5n8rw071k1as4nnwvppmdaz2l5scn0wv120vcq"; depends=[Rcpp]; }; - generalCorr = derive2 { name="generalCorr"; version="1.0.9"; sha256="0xc1rs9li59ni928g7lznhq3z7bn9hv3giip2h37agrbq4z450ni"; depends=[meboot np psych xtable]; }; - generalhoslem = derive2 { name="generalhoslem"; version="1.3.1"; sha256="0nir6zrg6dx4pn3wzi8j54y825442rbf7mnd4in9icn8nmk2zsqm"; depends=[MASS reshape]; }; + generalCorr = derive2 { name="generalCorr"; version="1.1.1"; sha256="1ihp9pksi47f3fsv7wgrp1z4ylmf5n57n6h27v130mi7k5lh1gdy"; depends=[meboot np psych xtable]; }; + generalhoslem = derive2 { name="generalhoslem"; version="1.3.2"; sha256="1c6mmgdxdm384fl9yqpij3fvjzzima10knljsf50hl4q9f66lvag"; depends=[MASS reshape]; }; generator = derive2 { name="generator"; version="0.1.0"; sha256="0xjvnmnpdms8rrxxcz6pd8w4rnbv3ghzqv4m63zxia2l98x7z4rf"; depends=[]; }; genetics = derive2 { name="genetics"; version="1.3.8.1"; sha256="0gfbrpz0zp5bgw3s21wrhjfy70laif47wcrjrm6mjgs6xapiw790"; depends=[combinat gdata gtools MASS mvtnorm]; }; genie = derive2 { name="genie"; version="1.0.4"; sha256="0ymrn42ik0rfildmyq4z0gsd7injda0dsjgx69nqb6hq0x8s5hqa"; depends=[Rcpp]; }; + geniusr = derive2 { name="geniusr"; version="1.0.0"; sha256="0akz6hkw9mjwgx9s9j24j5l1z4q41kbhna2245l26ymn4cf0rwjc"; depends=[httr purrr rvest stringr tibble xml2]; }; genlasso = derive2 { name="genlasso"; version="1.3"; sha256="1q4ybg8xzphnqwywwdb7i2q94dlxwpggvisjqqdj39jh2cabda57"; depends=[igraph MASS Matrix]; }; genlogis = derive2 { name="genlogis"; version="0.5.0"; sha256="0ybbfm9znkm52kin4f8dxb63rn6b91zsa31baw1lgczh41yswg3r"; depends=[distr doParallel foreach ggplot2 manipulate]; }; + geno2proteo = derive2 { name="geno2proteo"; version="0.0.3"; sha256="1q054ai42f5gmrj791abj02f663zs7ymdh3pfs3b2lq6i4w9s2fb"; depends=[BiocGenerics GenomicRanges IRanges R_utils RUnit S4Vectors]; }; genoPlotR = derive2 { name="genoPlotR"; version="0.8.7"; sha256="1zplk0acismv4x528rmmg5jcv6ng6c4vjf5h0mr124fj3kizsrg0"; depends=[ade4]; }; genomeplot = derive2 { name="genomeplot"; version="1.0"; sha256="15v01ngxq7kxav1bhw1mvqradrmvwsad5xh9l5skivb5smh9795w"; depends=[ggplot2]; }; genomic_autocorr = derive2 { name="genomic.autocorr"; version="1.0-1"; sha256="1lidrjz1flxw4jvhqdi8y813m7ss4kkvm7bxsdpz60dxxw3204gm"; depends=[data_table magrittr reshape]; }; @@ -6465,7 +6608,7 @@ in with self; { geofd = derive2 { name="geofd"; version="1.0"; sha256="16312g9mgw52mpsfky1j20zcqkkv91ihl0xhvv1bl80diffzf0zi"; depends=[fda geoR]; }; geohash = derive2 { name="geohash"; version="0.3.0"; sha256="1yabnf0a6jd4r6zh83sxb9wcn4vs8csp7c80qs6pi1nx016lirx7"; depends=[Rcpp]; }; geojson = derive2 { name="geojson"; version="0.2.0"; sha256="1xvbkdaaf55x015pflvcdy06ayrmhqi3my0sdqb48z129rdbr3i7"; depends=[jqr jsonlite lazyeval magrittr protolite sp]; }; - geojsonR = derive2 { name="geojsonR"; version="1.0.3"; sha256="102crv0yk28j71zlwaz4892fvvf040v533w4p3gq8kl71v35l5jd"; depends=[R6 Rcpp RcppArmadillo]; }; + geojsonR = derive2 { name="geojsonR"; version="1.0.4"; sha256="0248lb1kgj43czp5z4q7dcrq6ra0jhq62q9x79mgyb83bqn940h8"; depends=[R6 Rcpp RcppArmadillo]; }; geojsonio = derive2 { name="geojsonio"; version="0.5.0"; sha256="1ywrzjksiim7xhjywhjmp6s3dalqyzh1948xr8958ahpbk242252"; depends=[geojson httr jqr jsonlite magrittr maptools readr rgdal rgeos sp V8]; }; geojsonlint = derive2 { name="geojsonlint"; version="0.2.0"; sha256="05j7059s1hs8i2fkmkv0mqmda3bgk5zbyi865ab0vl361wiwmdya"; depends=[httr jsonlite jsonvalidate V8]; }; geoknife = derive2 { name="geoknife"; version="1.5.5"; sha256="0azb98zk4ayfm0z9vz5h59490xvng16p3gpdn60ca9mwdikyxks3"; depends=[curl httr sp XML]; }; @@ -6479,77 +6622,80 @@ in with self; { geonames = derive2 { name="geonames"; version="0.998"; sha256="1p0x260i383ddr2fwv54pxpqz9vy6vdr0lrn1xj7178vxic1dwyy"; depends=[rjson]; }; geoops = derive2 { name="geoops"; version="0.1.2"; sha256="1p2nc6lhqvnxs4l8k0kyqb7mjigaycjms61139sd39qs6wy7cnvp"; depends=[Rcpp]; }; geoparser = derive2 { name="geoparser"; version="0.1.1"; sha256="0rk2wcig79r28a974bc181p8vypxzbgxcb9rsp24qj9mg02rn5n5"; depends=[digest dplyr httr jsonlite lazyeval purrr stringr tidyr]; }; - geophys = derive2 { name="geophys"; version="1.3-9"; sha256="05q42b1pqfihamxbh5s5kxkrslr84j5p6y1cybmcl31z9dg92ccl"; depends=[cluster GEOmap RFOC RPMG RSEIS]; }; - georob = derive2 { name="georob"; version="0.3-5"; sha256="146k3jblfdmny6knxxxmrlvnizbfwabpxh2cdsl9pyi3rzwljscy"; depends=[constrainedKriging fields lmtest nleqslv nlme quantreg RandomFields robustbase snowfall sp]; }; - geosapi = derive2 { name="geosapi"; version="0.1-0"; sha256="04qab7qs22f1havziv5ynmrmdvi8539gjyfl83x5w5l44rjrx7lb"; depends=[httr openssl R6 XML]; }; + geophys = derive2 { name="geophys"; version="1.4-1"; sha256="1s64sbr0chv0z2vaw059khfkv8iga1kr6428kkglgafq5x2d6h3q"; depends=[cluster GEOmap RFOC RPMG RSEIS]; }; + georob = derive2 { name="georob"; version="0.3-6"; sha256="01gq9ymqk3zyjs5n7nj27ky2bnhc7x7npbipa5bcq7jda6gxirhr"; depends=[abind constrainedKriging fields lmtest nleqslv nlme quantreg RandomFields robustbase snowfall sp]; }; + geosapi = derive2 { name="geosapi"; version="0.2-0"; sha256="15w2rd0scv0aywngp2h7nzbgh4ddbgnf54scd454ixgv67m99p5f"; depends=[httr openssl R6 XML]; }; geoscale = derive2 { name="geoscale"; version="2.0"; sha256="0gisds0in32xhw54fxfyxvwxgrfjs871wmqf6l915nr896rlx0bm"; depends=[]; }; geospacom = derive2 { name="geospacom"; version="0.5-8"; sha256="14qyjbq0n43c2zr9gp11gdqgarvmicx3gpq2ql2vjfzrmirxwjgg"; depends=[classInt geosphere maptools rgeos sp]; }; geosphere = derive2 { name="geosphere"; version="1.5-7"; sha256="186qdm5niq7v3d4w4rngx71znsgi44hnam7698bsx9ar5mg5b6wx"; depends=[sp]; }; geospt = derive2 { name="geospt"; version="1.0-2"; sha256="1814nn0naxvbn0bqfndpmizjbqcs6rm87g2s378axkn6qpii4bh8"; depends=[fields genalg gsl gstat limSolve MASS minqa plyr sgeostat sp TeachingDemos]; }; geosptdb = derive2 { name="geosptdb"; version="0.5-0"; sha256="0m0dlazhq2za71mi3q8mz2zvz7yrmda7lha02kh9n820bx89v33z"; depends=[FD fields geospt gsl limSolve minqa sp StatMatch]; }; - geostatsp = derive2 { name="geostatsp"; version="1.5.4"; sha256="1c2306sh2h0kp3yclgx49z6zy91ghi53ajrj89hjgaxkhzhf6ba7"; depends=[abind Matrix numDeriv raster sp]; }; + geostatsp = derive2 { name="geostatsp"; version="1.6.0"; sha256="12lkmwfg4wqmc13xzsmgc1g624v2kpacxpycwlcafr60rbix6f9w"; depends=[abind Matrix numDeriv raster sp]; }; geotech = derive2 { name="geotech"; version="1.0"; sha256="18s7w6h1svc4n1hcgj5njfkf3nflkc53cdwsq5112p3442rlz33f"; depends=[]; }; geotools = derive2 { name="geotools"; version="0.1"; sha256="0d0vf9dvrrv68ivssp58qzaj8vra26ms33my097jmzmgagwy1spd"; depends=[]; }; geotoolsR = derive2 { name="geotoolsR"; version="1.0"; sha256="1arbyb1q96ya3smn9sqzqji5v21x37iyyxmvlmqmjj75an8ix5dp"; depends=[dplyr geoR ggplot2 tidyr]; }; geotopbricks = derive2 { name="geotopbricks"; version="1.4"; sha256="1jqkdhljf0syfvkcy7wgaccrhp3hfx0kymw3vyckhmf1dkwbjvyj"; depends=[raster rgdal stringr zoo]; }; + geozoning = derive2 { name="geozoning"; version="1.0.0"; sha256="0cqdi2jgqrxc339qkr57dp11jp40x99f9inwamnh7ymg2q7kq14s"; depends=[deldir fields ggplot2 gstat maptools RandomFields raster rgeos sp]; }; geozoo = derive2 { name="geozoo"; version="0.5.1"; sha256="0g91yhg7zw1bp0lxxblr2irckjg2rl4pg1vgglccnmxkzn0ji2qi"; depends=[bitops]; }; gepaf = derive2 { name="gepaf"; version="0.1.0"; sha256="0ld7r0dkap7bpmb2fc8x0pzffvnlzp2q1bndx4l2ffiyygsq6f72"; depends=[bitops]; }; gesca = derive2 { name="gesca"; version="1.0.4"; sha256="1ndn8wgp22pr017x6v7jw8jy4gd06x8110qa860hw8i6pn47wfwv"; depends=[]; }; gesis = derive2 { name="gesis"; version="0.2.1"; sha256="1cdmhfdjiwsp48a7b0r1mnagnymz606mkzpam9fsvfl72vzji2w7"; depends=[httr rvest xml2]; }; - getCRUCLdata = derive2 { name="getCRUCLdata"; version="0.2.0"; sha256="169dhfj2v324n358b9czqllalyisg70cgmbqac2fiq3ny53i3z1a"; depends=[data_table dplyr hoardr httr raster tibble tidyr]; }; + getCRUCLdata = derive2 { name="getCRUCLdata"; version="0.2.2"; sha256="14rw7pdcan4bdjfb16z3h0acx2s8l34vywsp4nn8l1pmmsvgqpap"; depends=[data_table dplyr hoardr httr raster tibble tidyr]; }; getMet = derive2 { name="getMet"; version="0.3.2"; sha256="0j1h1vy8rd7czpnb4msdb9k560pnh7kjkmpqqwzwin2ms1c0mggb"; depends=[EcoHydRology jsonlite]; }; getPass = derive2 { name="getPass"; version="0.2-2"; sha256="03ydafhh0sk3rcnpr3paajyji64x2ddp6p814p9mvbmyrblcgzcc"; depends=[rstudioapi]; }; + getTBinR = derive2 { name="getTBinR"; version="0.5.2"; sha256="0rgjsfvrg3llpj5mnyrypm57yli680i5ir3fw1dgyh40p8pmaks0"; depends=[data_table dplyr ggplot2 ggthemes magrittr plotly purrr scales tibble viridis]; }; getlandsat = derive2 { name="getlandsat"; version="0.1.0"; sha256="0h2520r5sqyzsajqw2i86byw9zm5za27mhjkrzzw5vr5sh1vdiwb"; depends=[data_table httr rappdirs readr tibble xml2]; }; getmstatistic = derive2 { name="getmstatistic"; version="0.1.1"; sha256="14w0n658s624anvxv7sqcgy6vfaaxcc7fj4xi1k2qrxd9rdh6dza"; depends=[ggplot2 gridExtra gtable metafor psych stargazer]; }; - getopt = derive2 { name="getopt"; version="1.20.0"; sha256="00f57vgnzmg7cz80rjmjz1556xqcmx8nhrlbbhaq4w7gl2ibl87r"; depends=[]; }; - gets = derive2 { name="gets"; version="0.13"; sha256="1z1p40hvqgj5rs5aq4a3wr5hva5ch0wadklmjxsny7hb1i8cix2w"; depends=[zoo]; }; + getopt = derive2 { name="getopt"; version="1.20.2"; sha256="13p35lbpy7i578752fa71sbfvcsqw5qfa9p6kf8b5m3c5p9i4v1x"; depends=[]; }; + gets = derive2 { name="gets"; version="0.14"; sha256="01pdpw56q27ihqyp58f0rsggqaqzay74ah1lwi54y7kcyw09yq5w"; depends=[zoo]; }; gettingtothebottom = derive2 { name="gettingtothebottom"; version="3.2"; sha256="1cz2vidh7k346qc38wszs2dg6lvya249hvcsn6zdpbx0c0qs3y72"; depends=[ggplot2 Matrix]; }; gettz = derive2 { name="gettz"; version="0.0.3"; sha256="1i06nfm824131q8lwwhrbzg2g9lbnmyp8k57w2vag7v8jj5rdrda"; depends=[]; }; gfcanalysis = derive2 { name="gfcanalysis"; version="1.4"; sha256="1hjgbiakf01mmaa2jhlnymcsjsj1zssay44p4sdxxxzpx4szs3vv"; depends=[animation geosphere ggplot2 plyr raster rasterVis RCurl rgdal rgeos sp stringr]; }; gfer = derive2 { name="gfer"; version="0.1.9"; sha256="0dlcwqllhmh5gxfcldjm7z4nancl0avxl3b3xk603mzc7qkrr63j"; depends=[circlize data_table ggplot2 ggrepel googlesheets gsheet httr jsonlite rvest scatterpie stringi tidyr V8 xml2]; }; gfmR = derive2 { name="gfmR"; version="1.0-1"; sha256="1irzkiq93wh4yphq8x1v2a7plcrskb8fs36qjaa0qhyhvhn0f57i"; depends=[faraway nnet]; }; ggChernoff = derive2 { name="ggChernoff"; version="0.2.0"; sha256="09bh9isvx3hwwvg72fv6z3fvp8dimpbhvbp328z8amq8jjhph4vf"; depends=[ggplot2 scales]; }; - ggCompNet = derive2 { name="ggCompNet"; version="0.1.0"; sha256="1199n4s2rh5zg001l3j8wmc6fxkbkk5vzp4q5kg661k3khgx0hd5"; depends=[dplyr geomnet GGally ggmap ggnetwork ggplot2 gridExtra igraph network progress readr scales sna tidyr tnet]; }; ggExtra = derive2 { name="ggExtra"; version="0.7"; sha256="0vygac13cjcq63f57zd28jyla09za58r77kq1mmsa4qx4dxyfsbl"; depends=[colourpicker ggplot2 gtable miniUI shiny shinyjs]; }; ggFacetSample = derive2 { name="ggFacetSample"; version="1.0.0"; sha256="04h5j54wblrygiscvb6n40b9lz42ssds1yz9qs5hxppiph68k5zq"; depends=[ggplot2 plyr]; }; - ggQC = derive2 { name="ggQC"; version="0.0.1"; sha256="0sf7hq69nzdhbrx3rhw92mxqq3cm2wqa79csp9lsvx97gwb60sfl"; depends=[ggplot2 plyr reshape2]; }; + ggQC = derive2 { name="ggQC"; version="0.0.2"; sha256="1wi9hb5ihix2vfpzbhpq2clbs7c0qh84qbmdfcxw4lknb0ha9ai1"; depends=[dplyr ggplot2 tidyr]; }; ggROC = derive2 { name="ggROC"; version="1.0"; sha256="0p9gdy7ia59d5m84z9flz5b03ri7nbigb3fav2v2wrml300d24vn"; depends=[ggplot2]; }; ggRandomForests = derive2 { name="ggRandomForests"; version="2.0.1"; sha256="0f8m0j79d8wbac14zk1s8812rz6vgf04bz1iqq8p4d3sxwnvaj7q"; depends=[ggplot2 randomForest randomForestSRC survival tidyr]; }; ggThemeAssist = derive2 { name="ggThemeAssist"; version="0.1.5"; sha256="1biw91a8p13h62v4w3yim6ghr98khmyhb3qd0h04asf91vvmpxbv"; depends=[formatR ggplot2 miniUI rstudioapi shiny]; }; ggallin = derive2 { name="ggallin"; version="0.1.1"; sha256="0hrxa7m07ppvnndivxcgxksdyblb6fw17aw46maqavlvcrz3fjgm"; depends=[ggplot2 scales]; }; - ggalluvial = derive2 { name="ggalluvial"; version="0.5.0"; sha256="0a39f2dp07kqzlxiixjknj453j9kydfb5cm96mgqzgnwwf7hh2qn"; depends=[alluvial dplyr ggplot2 lazyeval tidyr]; }; + ggalluvial = derive2 { name="ggalluvial"; version="0.6.0"; sha256="1c7jigi5zph0slfk8z0has3irlm39xlpklzak6s04m2idwl7dcjz"; depends=[dplyr ggplot2 lazyeval rlang tidyr]; }; ggalt = derive2 { name="ggalt"; version="0.4.0"; sha256="0ssa274d41vhd6crzjz7jqzbwgnjimxwxl23p2cx35aqs5wdfjpc"; depends=[ash dplyr extrafont ggplot2 gtable KernSmooth maps MASS plotly proj4 RColorBrewer scales tibble]; }; ggbeeswarm = derive2 { name="ggbeeswarm"; version="0.6.0"; sha256="0crk29p5vi1r3a988kms4y7r0iqwgwzsikgvh18r9wbzyr98bb5v"; depends=[beeswarm ggplot2 vipor]; }; + ggbuildr = derive2 { name="ggbuildr"; version="0.1.0"; sha256="0pld635v6fv46ky7s4icwxlcnr7z6bp5ikf20adpkljwhy0wwxak"; depends=[ggplot2 purrr readr]; }; ggconf = derive2 { name="ggconf"; version="0.1"; sha256="1h7z4amlycfddisf8ix5kmax56ix8hdllfn77rf4fs5sbqsqxkdm"; depends=[ggplot2 rly tibble]; }; ggcorrplot = derive2 { name="ggcorrplot"; version="0.1.1"; sha256="04jq1qpsgy8bgpilp1a02va4vz0adkjwrz9znmhv54q81qiv7h51"; depends=[ggplot2 reshape2]; }; ggdendro = derive2 { name="ggdendro"; version="0.1-20"; sha256="1zzq1hxd0d1qa5hrzwfkdw6fzscpcafbwbpkrb62dm559y8awp0j"; depends=[ggplot2 MASS]; }; ggdmc = derive2 { name="ggdmc"; version="0.1.3.9"; sha256="07a9g6kwq4hg5zlcxndwmyprl3di7fzsn2960qyixn5bzrfk7sh2"; depends=[coda ggmcmc ggplot2 ggthemes gridExtra loo Rcpp RcppArmadillo rtdists]; }; - gge = derive2 { name="gge"; version="1.2"; sha256="00kwm4xsr8796qm98b00rlznaicgn0aagkqn2h1qmdw70scifg8l"; depends=[Rcpp reshape2 rgl]; }; + gge = derive2 { name="gge"; version="1.3"; sha256="0bqclmm4jr7y52n7qh4jikd0804iccjdpy55bvbc2k8ypsp2biik"; depends=[nipals reshape2 rgl]; }; ggedit = derive2 { name="ggedit"; version="0.2.1"; sha256="0l2ryp8xcyqsgfcywr3y6c2y8j42c15dyrcmfhfimbzy52bmnqxy"; depends=[colourpicker dplyr ggplot2 miniUI plyr reshape2 rstudioapi scales shiny shinyAce shinyBS]; }; - ggeffects = derive2 { name="ggeffects"; version="0.3.0"; sha256="1r8w5v151s0iljn4d0c9785r0d4isi2j5h0ikwhm17va6bmzni2j"; depends=[dplyr effects ggplot2 magrittr prediction purrr rlang scales sjlabelled sjmisc sjstats snakecase tibble tidyr tidyselect]; }; + ggeffects = derive2 { name="ggeffects"; version="0.3.1"; sha256="04wmyrs1pzdv120w7pq2g0x51h061lj27p42gaxfcrzdbplvrwv1"; depends=[dplyr effects ggplot2 magrittr prediction purrr rlang scales sjlabelled sjmisc sjstats tibble tidyr tidyselect]; }; ggenealogy = derive2 { name="ggenealogy"; version="0.3.0"; sha256="169zkcp13g0ll9941a7hh31fll0mavnkb6fd3kvkibdjm621ymyh"; depends=[ggplot2 igraph plotly plyr reshape2 tibble]; }; ggfan = derive2 { name="ggfan"; version="0.1.1"; sha256="0sqf37afz9kpl2wm3cpansav9ndil8agwrblzj0fhnyrj41s148n"; depends=[colorspace dplyr ggplot2 rstan]; }; ggfittext = derive2 { name="ggfittext"; version="0.5.0"; sha256="0ih6mqg53y5iaiq003wbzp6qqx4844yh5z9zw5d0k7gqclprmpn5"; depends=[ggplot2 stringi]; }; ggforce = derive2 { name="ggforce"; version="0.1.1"; sha256="0y49anv5sj1qn1ifcxg1krkkv4z3dlan5lya36vfmzzdamfgq5p6"; depends=[dplyr ggplot2 gtable lazyeval MASS Rcpp scales tweenr units]; }; - ggformula = derive2 { name="ggformula"; version="0.6"; sha256="0ibzp6m9i87kqi3xjjkgc4lvbhhcvw0j90axr1v8khj2zaxsbwnx"; depends=[ggplot2 magrittr mosaicCore rlang stringr tibble]; }; - ggfortify = derive2 { name="ggfortify"; version="0.4.1"; sha256="19jwcz1z6g7l65l6cj8zspypfb86pn3x18vzdcgf932n14g646d2"; depends=[dplyr ggplot2 gridExtra scales tibble tidyr]; }; + ggformula = derive2 { name="ggformula"; version="0.6.2"; sha256="08smdd3s8dh3qjcm25v8h1r8pfvlfvkymnbhlyw4bymq479g4w0j"; depends=[ggplot2 magrittr mosaicCore rlang stringr tibble]; }; + ggfortify = derive2 { name="ggfortify"; version="0.4.2"; sha256="0xw30mkcsrigbkcqp68h51vjj9pd9fdly5j85j9q6cx22qj59jr9"; depends=[dplyr ggplot2 gridExtra scales stringr tibble tidyr]; }; gggenes = derive2 { name="gggenes"; version="0.2.0"; sha256="1s3lkdl9wmhcdra90bv8zzb16h2sdmpr15x8c3d0gfw7yir6prj2"; depends=[ggplot2]; }; ggghost = derive2 { name="ggghost"; version="0.2.1"; sha256="0kvsjadxxdf6yvzk4a6yqkg02q1ysslvf3m0a369bdim396z4hnv"; depends=[animation ggplot2]; }; ggguitar = derive2 { name="ggguitar"; version="0.1.1"; sha256="1lmfs54h91gzcxin37v4flkywbq3fs648mm1h9ak03xlj5nagzsi"; depends=[dplyr ggplot2 gridExtra lazyeval readr tibble]; }; gghalfnorm = derive2 { name="gghalfnorm"; version="1.1.2"; sha256="1sy0m6pqmnjbqv60rljyblhis0dxwkhw751jhlad5arcgrcwf4k8"; depends=[ggplot2 ggrepel]; }; gghighlight = derive2 { name="gghighlight"; version="0.0.1"; sha256="12by8q31fl2kc6w5p72wvd2nxg1cpvhgdbais6hjly1sxi8jd6zp"; depends=[dplyr ggplot2 ggrepel magrittr purrr rlang]; }; - ggimage = derive2 { name="ggimage"; version="0.0.7"; sha256="0vwxf93h820klkk5k6bc9jdckqr5maki50lprxvxg7awhbj6dchl"; depends=[ggplot2 gridGraphics magick rvcheck scales tibble]; }; - ggiraph = derive2 { name="ggiraph"; version="0.4.1"; sha256="1bda2p84dia2kgran40d45wag45kpbrq19vxd0j9p07n1s86014m"; depends=[ggplot2 htmltools htmlwidgets plyr rvg uuid xml2]; }; + ggimage = derive2 { name="ggimage"; version="0.1.0"; sha256="1kh8r859bayrha96b5wyfncbns2qw49v5kfai1jx66w89x3bsr7h"; depends=[ggplot2 gridGraphics magick rvcheck scales tibble]; }; + ggiraph = derive2 { name="ggiraph"; version="0.4.2"; sha256="0bk6q0psxzggm69yyhfw047xyygp23rk63xvdd9dv6avndfn1h7n"; depends=[ggplot2 htmltools htmlwidgets rvg xml2]; }; ggiraphExtra = derive2 { name="ggiraphExtra"; version="0.1.0"; sha256="09fiwkaai4sy5kxy4p0c4ldb8ya63czff53hbm6d8fm858fw2byw"; depends=[ggiraph ggplot2 mapproj mgcv moonBook mycor plyr reshape2 scales XML]; }; ggjoy = derive2 { name="ggjoy"; version="0.4.0"; sha256="1s24zn7gmk52bvjjhanxby7rxbnc2yfl0nx5nv7x7z0zja8gg7nb"; depends=[ggplot2 ggridges]; }; gglasso = derive2 { name="gglasso"; version="1.4"; sha256="0r4zfgkys8104iw1vzww3qid8a6dyn03x0jlgwrdvavfj86yhq54"; depends=[]; }; gglogo = derive2 { name="gglogo"; version="0.1.3"; sha256="1dq0bixz44p32kpma5wrqjqklal2ipjmqdwqap0xch542drlpqbn"; depends=[dplyr ggplot2 jpeg knitr magrittr plyr purrr reshape2]; }; ggloop = derive2 { name="ggloop"; version="0.1.0"; sha256="0jpbgb16jfsv557zvishln98y7nd6p1ryp6hxkrkmhp9p35vzvc0"; depends=[assertthat ggplot2 lazyeval magrittr plyr]; }; + gglorenz = derive2 { name="gglorenz"; version="0.0.1"; sha256="0ar9ih6yvxb5pyba8y8jjsbwaq808baysjhpd15psjzhfbimjqfm"; depends=[ggplot2 ineq]; }; ggm = derive2 { name="ggm"; version="2.3"; sha256="1n4y459x2i0jil8chjjqqjs28a8pzfxrws2fcjkg3il7zy0zwbw3"; depends=[igraph]; }; ggmap = derive2 { name="ggmap"; version="2.6.1"; sha256="0mssb09w818jv58h7mly9y181pzv22sgcd4a079cfpq04bs0wigw"; depends=[digest geosphere ggplot2 jpeg mapproj plyr png proto reshape2 RgoogleMaps rjson scales]; }; ggmcmc = derive2 { name="ggmcmc"; version="1.1"; sha256="09b89cnmdmiwy18igzxjiq60l1xqjh022fw3rhd5kx7lnh02yza3"; depends=[dplyr GGally ggplot2 tidyr]; }; ggmosaic = derive2 { name="ggmosaic"; version="0.1.2"; sha256="1mxa09914j9i8b14brl70a7j7ngycj8wkil3sqkd4jwplaszvhsn"; depends=[dplyr ggplot2 gridExtra NHANES plotly productplots purrr tidyr]; }; - ggmuller = derive2 { name="ggmuller"; version="0.3"; sha256="0qwirr3hlpjvrfihji49k6abk76dj21y98ky478qfnmxk9gq8jwa"; depends=[ape dplyr ggplot2]; }; + ggmuller = derive2 { name="ggmuller"; version="0.5.1"; sha256="1wa4gcyzbwy1s200w57phahh6rwaf62qn3i400xywkf34fsi1il8"; depends=[ape dplyr ggplot2]; }; ggnetwork = derive2 { name="ggnetwork"; version="0.5.1"; sha256="13qisn4msjzkpcmn7rh2c4ymqfxp9bayrvqngp9pysfmr6wvc6ia"; depends=[ggplot2 ggrepel network sna]; }; ggparallel = derive2 { name="ggparallel"; version="0.2.0"; sha256="0zxaff0jbqkbavsmh1yyp3vdrxsam6a66hjw8lamv9pksdw1s2wf"; depends=[ggplot2 plyr reshape2]; }; ggplot2 = derive2 { name="ggplot2"; version="2.2.1"; sha256="0543782ddv2hp6s0l702mnxfg8n7a6qlbm8bm55x22hnqgz8kg2z"; depends=[digest gtable lazyeval MASS plyr reshape2 scales tibble]; }; @@ -6561,7 +6707,7 @@ in with self; { ggpubr = derive2 { name="ggpubr"; version="0.1.6"; sha256="0mvw215bj887958p34f0dzlrb8mgyfcz9b5zvsschvbhamqinqna"; depends=[cowplot dplyr ggplot2 ggrepel ggsci ggsignif gridExtra magrittr purrr scales tidyr]; }; ggpval = derive2 { name="ggpval"; version="0.2.0"; sha256="1nwf3cz1258khp1barxxp28326bagvlsfhg4rcccbxcpny9vbl7d"; depends=[data_table ggplot2]; }; ggquiver = derive2 { name="ggquiver"; version="0.1.0"; sha256="0p6li7cxjy54qrmaf9ja6aknnlxwq4sl0z1yip1mznb5rhv6lpxw"; depends=[dplyr ggplot2]; }; - ggraph = derive2 { name="ggraph"; version="1.0.0"; sha256="0xkhqkckqz201601aqznrgnlgqzs7is1nfpdyalag58q5wl934j8"; depends=[digest dplyr ggforce ggplot2 ggrepel gtable igraph MASS plyr Rcpp scales viridis]; }; + ggraph = derive2 { name="ggraph"; version="1.0.1"; sha256="0sm1hf2fjfia0s8m5b1x6pi8wvww77rpck86clpa2figwvck8jqr"; depends=[digest dplyr ggforce ggplot2 ggrepel gtable igraph MASS plyr Rcpp scales viridis]; }; ggraptR = derive2 { name="ggraptR"; version="1.0"; sha256="1n3ildrm8jh6m1j8njx1icbjhpkv3d2ndx59d6ddyg4np09cmp8w"; depends=[assertthat backports colorspace colourpicker DBI dplyr DT evaluate futile_logger futile_options gdtools GGally ggplot2 ggthemes gtable htmltools htmlwidgets httpuv labeling lambda_r lazyeval magrittr miniUI munsell plyr RColorBrewer Rcpp reshape rmarkdown rprojroot scales shiny shinyBS shinyjs stringi stringr svglite tibble xtable yaml]; }; ggrepel = derive2 { name="ggrepel"; version="0.7.0"; sha256="0g0qfm6g71rv27423c1x846ipilnj213knyzrcr09vrpxc87l618"; depends=[ggplot2 Rcpp scales]; }; ggridges = derive2 { name="ggridges"; version="0.4.1"; sha256="0kfa3icqdalqdg1klxjrhfl7if35d3wnsiyl86bprw5dyqyh3lh3"; depends=[ggplot2 plyr scales]; }; @@ -6571,7 +6717,7 @@ in with self; { ggsignif = derive2 { name="ggsignif"; version="0.4.0"; sha256="1rn58d7pb3axk6chiihryykrzw76adaa2yiafq4d0j6qbhax78f7"; depends=[ggplot2]; }; ggsn = derive2 { name="ggsn"; version="0.4.0"; sha256="0si3llqlb0dg482cqxhv5lm6raawqwpcd5ymjicw3780xq7d7mrk"; depends=[ggplot2 maptools png]; }; ggspatial = derive2 { name="ggspatial"; version="0.2.1"; sha256="11vminz4kwv1ny4v9h23sp7j7d45q6v4804xv9fp04qgzbzi9lv8"; depends=[abind ggplot2 maptools plyr raster reshape2 rgdal rosm scales sp]; }; - ggspectra = derive2 { name="ggspectra"; version="0.2.2"; sha256="162hbi3nygxrazckmjc8nah2i49mwr0kddqrgvdzwqwn05ysdw53"; depends=[dplyr ggplot2 ggrepel lubridate photobiology photobiologyWavebands reshape2 scales tidyr]; }; + ggspectra = derive2 { name="ggspectra"; version="0.2.3"; sha256="11y2vlcpxyh56pdfzz11bkip2nxv6rrwscqv48p5fvgn9sllly4q"; depends=[dplyr ggplot2 ggrepel lubridate photobiology photobiologyWavebands reshape2 scales tidyr]; }; ggstance = derive2 { name="ggstance"; version="0.3"; sha256="0sr84nasr8x8ib3mdsjck73gbfg9xba50s5nxdij0ah9xqnpyhpi"; depends=[ggplot2 lazyeval plyr purrr]; }; ggswissmaps = derive2 { name="ggswissmaps"; version="0.1.1"; sha256="0is48x6k2p5dgj9q4km0dv33a9pcpfhlai9vz295y3acpyrkmnn4"; depends=[ggplot2]; }; ggtern = derive2 { name="ggtern"; version="2.2.1"; sha256="05dszysn1qr5s4ji4il91pv19xjh5yd09w9f153fmg4cyfl716iz"; depends=[compositions ggplot2 gridExtra gtable latex2exp lattice MASS plyr proto scales]; }; @@ -6579,39 +6725,40 @@ in with self; { ggversa = derive2 { name="ggversa"; version="0.0.1"; sha256="0xqn8iznrm8q30pxwka88wi1z7lndi6lm12rq6ngcaxf294fbz01"; depends=[]; }; ggvis = derive2 { name="ggvis"; version="0.4.3"; sha256="1p7c8f83da30grj5n0v80p5djp6z0r62z5zqpv2a3ahn61w1gm9l"; depends=[assertthat dplyr htmltools jsonlite lazyeval magrittr shiny]; }; gh = derive2 { name="gh"; version="1.0.1"; sha256="1llinfajb0g7006jd2w1hpskxpmkjhnqarcjb71r1qvsccb2ph7k"; depends=[httr ini jsonlite]; }; - ghibli = derive2 { name="ghibli"; version="0.1.0"; sha256="0qss6kgmvrjx2cp6lwymh1sc9jmcnkl17lghmh2b19f600d2shr4"; depends=[ggplot2]; }; + ghibli = derive2 { name="ghibli"; version="0.1.1"; sha256="1jnl017hkzhiic0fndprs68xx3njlijxkaqj9d65xazcwynaq436"; depends=[ggplot2]; }; ghit = derive2 { name="ghit"; version="0.2.18"; sha256="117dn7j4nsdbdj1c1zndfikih3gxgxnkdxi3z0qmrbpsb9l4h1ic"; depends=[git2r]; }; ghyp = derive2 { name="ghyp"; version="1.5.7"; sha256="195hsskh2ykafqr93f675xqsmhbrki3abi61hk78bzy09n1d4jfk"; depends=[gplots numDeriv]; }; giRaph = derive2 { name="giRaph"; version="0.1.2"; sha256="137c39fz4vz37lpws3nqhrsf4qsyf2l0mr1ml3rq49zz4146i0rz"; depends=[]; }; - gibble = derive2 { name="gibble"; version="0.0.1"; sha256="0cxxd02njjkd5z0n9qy5w1rdwhirjjbn2p4i9m9q68li9cwi4r2i"; depends=[dplyr tibble]; }; + gibble = derive2 { name="gibble"; version="0.0.2"; sha256="0a9h3q0kwk9aagcpnmih59vbm5n7hdjpa4idwagky351almblmr6"; depends=[dplyr tibble]; }; gibbs_met = derive2 { name="gibbs.met"; version="1.1-3"; sha256="1yb5n8rkphsnxqn8rv8i54pgycv9p7x1xhinx4l5wzrds3xhf2dc"; depends=[]; }; - gifti = derive2 { name="gifti"; version="0.7.4"; sha256="02z6r9p0vx22ja2bs6hqb9hjwlcnb8g0kcphqpj6ivkanwh6702w"; depends=[base64enc R_utils xml2]; }; - gimme = derive2 { name="gimme"; version="0.3-1"; sha256="097772bl3acwfbhlhzfc40j86prdcm6zq7ls892p4352qfnl9r47"; depends=[igraph lavaan qgraph]; }; - gimms = derive2 { name="gimms"; version="1.0.0"; sha256="0f959gr4nzf9p2gpvdrzlndp24g2hhzc0wbkgpbs056wp8ij0mws"; depends=[Kendall raster RCurl zyp]; }; + gifti = derive2 { name="gifti"; version="0.7.5"; sha256="1y64bc33b5f64a4khp916s9zb7kbb24xgdg3pdlh0f8m6zrbmp4a"; depends=[base64enc R_utils xml2]; }; + gimme = derive2 { name="gimme"; version="0.3-2"; sha256="1k79c057024i59iccphzdkh0022dd4dv0vrpn3pvlw9px6j9fbz3"; depends=[igraph lavaan qgraph]; }; + gimms = derive2 { name="gimms"; version="1.1.0"; sha256="0mqffqvaapb0m0d50vg4kvdp67yq99qf54f5anwq4md0rf3x8lid"; depends=[curl Kendall ncdf4 raster RCurl zyp]; }; giphyr = derive2 { name="giphyr"; version="0.1.2"; sha256="1id3r291xyj1ylxgmw2cbazaz0jq4bksj8bijwagcawimfxibz45"; depends=[dplyr httr miniUI purrr rstudioapi shiny tibble]; }; gistr = derive2 { name="gistr"; version="0.4.0"; sha256="1q1wp3q3ppkclvw9fsc9pr5raqv2r9rdm2n8s197b8brfcjilxsi"; depends=[assertthat dplyr httr jsonlite knitr magrittr rmarkdown]; }; - git2r = derive2 { name="git2r"; version="0.19.0"; sha256="0ws6fbndmaafk2am4dwnz24qizxhld0yh54hgx0z6lzv3p1j209q"; depends=[]; }; + git2r = derive2 { name="git2r"; version="0.21.0"; sha256="11xgddmxzh9cy85k8fb90il43qswpvryz0h9r0j1gbclfg2f9004"; depends=[]; }; gitgadget = derive2 { name="gitgadget"; version="0.2.1"; sha256="02jmp5lnk156sfqlv91jn42xds98ihya1x2f97cfwpzlas5qrxky"; depends=[curl dplyr jsonlite miniUI rstudioapi shiny]; }; - githubinstall = derive2 { name="githubinstall"; version="0.2.1"; sha256="0vcc1s4ywaz8fjsg99knlxms4505wpvl08g48ndxcp3fqzvfc8i7"; depends=[curl data_table devtools httr jsonlite]; }; + githubinstall = derive2 { name="githubinstall"; version="0.2.2"; sha256="0hqh86r2007hzdbm8rr0fwqhhsna7ji8sdgmdnrxkxraa5f2pfz3"; depends=[curl data_table devtools httr jsonlite mockery]; }; gitlabr = derive2 { name="gitlabr"; version="0.9"; sha256="0i9sqqvn9xzknybsj9nmi6kclw8c35shy658li17455d28gv4653"; depends=[base64enc dplyr httr magrittr purrr stringr tibble yaml]; }; gitter = derive2 { name="gitter"; version="1.1.1"; sha256="10m4rs6mhg7xn8dfd41ai0bnn5bnxn6cgqip22hrrpj0i2lzky6l"; depends=[EBImage ggplot2 jpeg logging PET tiff]; }; givitiR = derive2 { name="givitiR"; version="1.3"; sha256="0y2slhxhj7k413kjaydin9hq3x2xgx4cgjshdplwnmg3x2nakn31"; depends=[alabama rootSolve]; }; - gjam = derive2 { name="gjam"; version="2.1.6"; sha256="07xx71bk3wwpznmpi2pads6rcf6vx00i2cwyfn9zmg52282kdl4i"; depends=[MASS RANN Rcpp RcppArmadillo]; }; - gk = derive2 { name="gk"; version="0.5.0"; sha256="0ixkl9jrmd4bcd3m34whfcikvwqbcdnzcd6gf5bdv81r0ygc5jml"; depends=[Ecdat lubridate progress]; }; - gkmSVM = derive2 { name="gkmSVM"; version="0.71.0"; sha256="1zpxgxmf2nd5j5wn00ps6kfxr8wxh7d1swr1rr4spq7sj5z5z0k0"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges IRanges kernlab Rcpp ROCR rtracklayer S4Vectors seqinr]; }; + gjam = derive2 { name="gjam"; version="2.1.8"; sha256="1232sdmdndxk0bxr1q9jx4gld9spb7mxybxkp9w1abv9391h91fp"; depends=[MASS RANN Rcpp RcppArmadillo]; }; + gk = derive2 { name="gk"; version="0.5.1"; sha256="1hgxb1lp78pbnj22i7ryf46im301j05y7hh75z2fxvv5nqgg2v75"; depends=[Ecdat lubridate progress]; }; + gkmSVM = derive2 { name="gkmSVM"; version="0.79.0"; sha256="04dakbgfvfalz4rm4fvvybp506dn5fbj5g86ybfhrc6wywjllsz3"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges IRanges kernlab Rcpp ROCR rtracklayer S4Vectors seqinr]; }; glacierSMBM = derive2 { name="glacierSMBM"; version="0.1"; sha256="0117fzz2b1lccs0kkwz59w2yysi72j54yvz7373pz11w7rjds84f"; depends=[raster sp udunits2]; }; - glamlasso = derive2 { name="glamlasso"; version="2.0.1"; sha256="1x87nv29r309l539qccbcll4kn889sdds6gvrhyvw68rs370pn2l"; depends=[Rcpp RcppArmadillo]; }; - glarma = derive2 { name="glarma"; version="1.5-0"; sha256="1afcccjayz6sj39mcg9h54d7dd1as8l63nxfw17bdh18zidr6ghi"; depends=[MASS]; }; + glamlasso = derive2 { name="glamlasso"; version="3.0"; sha256="1ynhl868kh25l8m04ln6ix31z9r26lrbr5ajprpq9yfhqs4l9ddc"; depends=[Rcpp RcppArmadillo]; }; + glarma = derive2 { name="glarma"; version="1.6-0"; sha256="0n0mv4xvh5q3y383cs224x6r608ciw4822pkanvmcjsc9zl0z1ar"; depends=[MASS]; }; glassdoor = derive2 { name="glassdoor"; version="0.7.6"; sha256="0zgkz32vp71fyy25lx4kaa5gj5aj7glhxa0yqnawl1j1a4klj3v3"; depends=[httr xml2]; }; glasso = derive2 { name="glasso"; version="1.8"; sha256="0gcapw7kyxb19wvdyxq1vsmc5j7yyd0rvqxs2i71k31q352sg6zw"; depends=[]; }; glba = derive2 { name="glba"; version="0.2"; sha256="0ckcz6v6mfbv34s8sp086czhb5l58sky79k84332rrz6wj47p3md"; depends=[]; }; glcm = derive2 { name="glcm"; version="1.6.1"; sha256="0xzfhafc7326v3g1xngp584039iknw3q3bcx8f0j4ig125in7sxk"; depends=[Rcpp RcppArmadillo]; }; gld = derive2 { name="gld"; version="2.4.1"; sha256="0ycm3w8s5bm5w2lqy0qa877cwjcwc9x1zyyyrknwwjjxip250iaw"; depends=[e1071 lmom]; }; - gldrm = derive2 { name="gldrm"; version="1.1"; sha256="0ixvxlgfvn7dbwd3nr27qr1x3lh0spynmkl9qprk8blvf68lsrvp"; depends=[]; }; - glinternet = derive2 { name="glinternet"; version="1.0.5"; sha256="1kjy0w6gaj161f52w3gn7kgsld4kqvm53n81kl6lvfwwh2qzw4q4"; depends=[]; }; + gldrm = derive2 { name="gldrm"; version="1.4"; sha256="0kjd78zpn65zs7nd2fqmm5qs6d0vyjyww93jgcx5ay5qpx83vyrv"; depends=[]; }; + glinternet = derive2 { name="glinternet"; version="1.0.7"; sha256="0kvhkhkhf5bmqvhxiz83cqw478s55gbkk3s2csa9bnz8ymkcn3f4"; depends=[]; }; gllm = derive2 { name="gllm"; version="0.35"; sha256="1m9asamh2yha9q8mrllvvc9qj2im6cspvfpafzc8krmh17zq4ins"; depends=[]; }; + gllvm = derive2 { name="gllvm"; version="0.1.0"; sha256="13ca5ms6bbrj3ny5n438v5ma0d7ccnghysz7c8452cpdq8sn87iy"; depends=[fishMod MASS Matrix mvabund mvtnorm Rcpp RcppEigen statmod TMB]; }; glm_ddR = derive2 { name="glm.ddR"; version="0.1.1"; sha256="123xqyw73l5lv746zvy2wjwr8xx6gpmwi5n86m8d05dj3bx02dzm"; depends=[ddR Matrix]; }; - glm_predict = derive2 { name="glm.predict"; version="2.5-1"; sha256="0q3mi89zc7386bcx0ysii5vf4viqdc933k4fhdwqfm9c2z3rzpcy"; depends=[MASS nnet]; }; + glm_predict = derive2 { name="glm.predict"; version="3.0-0"; sha256="1kqh8g7mrpfnzklk23x7ckbn5p2qcw951cg4s9gnlncggby864ig"; depends=[MASS nnet]; }; glm2 = derive2 { name="glm2"; version="1.1.3"; sha256="0mmvba1ccmykm2k02ysjbiqj1lwzdwrbxr1hq1kn1gl97xlarp2x"; depends=[]; }; glmBfp = derive2 { name="glmBfp"; version="0.0-51"; sha256="15jm450j1f0nl7vqvpb2mwapdlvn7kq2kxf5s96x21siwsz7sssv"; depends=[coda Rcpp RcppArmadillo rms Runuran statmod survival]; }; glmbb = derive2 { name="glmbb"; version="0.3"; sha256="12yabwswps0fmprh8nb9jdny9xrm13jvc0d9m3w04ppmsvalrmwl"; depends=[digest]; }; @@ -6624,20 +6771,21 @@ in with self; { glmmBUGS = derive2 { name="glmmBUGS"; version="2.4.0"; sha256="1clnnf0ja2xiqdgi2f1xs04hhi13rnp8jzzdjncbqbdzk2ic3ynl"; depends=[abind MASS sp]; }; glmmLasso = derive2 { name="glmmLasso"; version="1.5.1"; sha256="1az9vdnyqyrfn1q7zrn6x4ywx77b0vg65cni45x37b0ybkwpis39"; depends=[Matrix minqa]; }; glmmML = derive2 { name="glmmML"; version="1.0.2"; sha256="0ndvp7a7dxq6ygdwzq783ci1y0zb4xwnj6g4w1cm8zvqak8dxjdb"; depends=[]; }; - glmmTMB = derive2 { name="glmmTMB"; version="0.1.4"; sha256="0kkh1xrl4mjps9zn2rz804bbs20n3asqv7vykibmd3cg60i3pc2f"; depends=[lme4 Matrix nlme RcppEigen TMB]; }; - glmmsr = derive2 { name="glmmsr"; version="0.2.0"; sha256="1p9k8iiv3n3jvp20lfbrrfnml809kndfwbw8vilb4dhx9bqds3c9"; depends=[BH lme4 Matrix numDeriv R6 Rcpp RcppEigen]; }; + glmmTMB = derive2 { name="glmmTMB"; version="0.2.0"; sha256="1yqizxjapdh0n872d26bdgn8a04xc6647mnjhb40g0jj59qgmxrc"; depends=[lme4 Matrix nlme RcppEigen TMB]; }; + glmmsr = derive2 { name="glmmsr"; version="0.2.1"; sha256="1f2q8zy3jy97y59bdyxhachkv5ndiwp71ihnspjbwz17mvc38cmn"; depends=[BH lme4 Matrix numDeriv R6 Rcpp RcppEigen]; }; glmnet = derive2 { name="glmnet"; version="2.0-13"; sha256="1zdqp6wnqxzp5qn2ky47phbkrxv3cpgbwmdp896h3xxjvp58sa7k"; depends=[foreach Matrix]; }; glmnetUtils = derive2 { name="glmnetUtils"; version="1.1"; sha256="0abvxkwfadh56672qh16vql49js9ar8cz8is0bs6i8jgsl5csz91"; depends=[glmnet Matrix]; }; glmnetcr = derive2 { name="glmnetcr"; version="1.0.3"; sha256="0w04m0q7w5xxm0yv14f2g1ykpy54pxzdplr0xcz9mn43wi4sl65a"; depends=[glmnet]; }; - glmpath = derive2 { name="glmpath"; version="0.97"; sha256="054v188ffjl6x11cld5s9py22kxcs0iq58x4yhxb0ny7mbma5hkn"; depends=[survival]; }; + glmpath = derive2 { name="glmpath"; version="0.98"; sha256="1jbiqqd1s93i941dhyyx50zlgwavhyjfw8bx13z4gz05rdvi4gn8"; depends=[survival]; }; glmpathcr = derive2 { name="glmpathcr"; version="1.0.5"; sha256="0iygw7nj2bin66dh3jwz7p2nwrrz2lir0nmbgk3a2rv3w982r01q"; depends=[glmpath]; }; + glmtlp = derive2 { name="glmtlp"; version="1.1"; sha256="01kyw0xipyr9z7x9z41wz7rqargzqd8s8ri34ffdvd3ggrdznl0p"; depends=[glmnet]; }; glmulti = derive2 { name="glmulti"; version="1.0.7"; sha256="154s72sjp6pz7ki7s4mgn5v62j7h0lfz9mngf40wvmy31da2s8ix"; depends=[rJava]; }; glmvsd = derive2 { name="glmvsd"; version="1.4"; sha256="03axsn85axs4d6fdlr3wcdwq6qa4991svkqc7k9r52kk1ar0w5zz"; depends=[brglm glmnet MASS ncvreg]; }; glmx = derive2 { name="glmx"; version="0.1-1"; sha256="06v2qxgr16w0qnfhjr9vdqcad5v475pwg2yhw0i236yzqbnsssh6"; depends=[Formula lmtest MASS sandwich]; }; globalGSA = derive2 { name="globalGSA"; version="1.0"; sha256="1f3xv03m6g2p725ff0xjhvn2xcfm7r7flyrba080i4ldy6fd8jg8"; depends=[]; }; globalOptTests = derive2 { name="globalOptTests"; version="1.1"; sha256="0yf4p82dpjh36ddpfrby7m3fnj2blf5s76lncflch917sq251h4f"; depends=[]; }; globalboosttest = derive2 { name="globalboosttest"; version="1.1-0"; sha256="1k7kgnday27sn6s1agzlj94asww81655d2zprx6qg7liv677bxvf"; depends=[mboost survival]; }; - globals = derive2 { name="globals"; version="0.10.3"; sha256="1brcxwjnpsy3mijkm6lvw12f1y7z800gsbkl2q3bhilp9s13x7nj"; depends=[codetools]; }; + globals = derive2 { name="globals"; version="0.11.0"; sha256="17spygv9m3mmn01cfxrm05pvny5ddzvr78c60hixqbfh8385na5c"; depends=[codetools]; }; globe = derive2 { name="globe"; version="1.2-0"; sha256="0xa0q5dac0g7xdlr679f3km8nqxlm7gi4msp9fbfivfvy0rmri96"; depends=[]; }; glogis = derive2 { name="glogis"; version="1.0-0"; sha256="19h0d3x5lcjipkdvx4ppq5lyj2xzizayidx0gjg9ggb1qljpyw9m"; depends=[sandwich zoo]; }; glpkAPI = derive2 { name="glpkAPI"; version="1.3.0"; sha256="0173wljx13jali2jxz4k5za89hc64n2j9djz5bcryrqhq4rmkp87"; depends=[]; }; @@ -6648,49 +6796,50 @@ in with self; { gma = derive2 { name="gma"; version="1.0"; sha256="08hxbs9z4vq5zjis0lgdcvlysaj1k7i0icdk3wsyqf3wd9znsibi"; depends=[car MASS nlme]; }; gmailr = derive2 { name="gmailr"; version="0.7.1"; sha256="1gniwwl0ci0wm7a3ai2lqrr590smmkdgyf3aarw6bdygn8hr3s3y"; depends=[base64enc crayon httr jsonlite magrittr mime]; }; gmapsdistance = derive2 { name="gmapsdistance"; version="3.3"; sha256="09vgrfv5dj0myys0rl767wn0xx1yvmm176c48812ysj2kj3fa29v"; depends=[RCurl XML]; }; - gmatrix = derive2 { name="gmatrix"; version="0.3"; sha256="0ni5scx48m99jg9a5l93qvfkz6v5m7d5c0fwhp14mgiw32ff1s1r"; depends=[]; }; gmediation = derive2 { name="gmediation"; version="0.1.1"; sha256="0md4h298vqw67qrjcaia6xz8s7akdpcmxa83irm12qgbh56a5rpr"; depends=[MASS plyr VGAM]; }; gmeta = derive2 { name="gmeta"; version="2.3-0"; sha256="1izfz6gkisa8rskhfka6q73rcgzwdsmkdhy79jwcaqk25jrwfk60"; depends=[BiasedUrn binom]; }; + gmfd = derive2 { name="gmfd"; version="1.0"; sha256="1l6hf191v76l5p9f6r4qpq5y940nb23x07mb6lmwna8nnz1sspaz"; depends=[]; }; gmm = derive2 { name="gmm"; version="1.6-1"; sha256="0giq0ic7gdvglkjby217r70dbz9v0xnvzvzv6icqj0m3rxwarmn1"; depends=[sandwich]; }; gmnl = derive2 { name="gmnl"; version="1.1-3"; sha256="05p2kikv8zz9ldc6xi5bz7fyinpd0sp2v82hxhx6h54hfa6i7b9v"; depends=[Formula maxLik mlogit msm plotrix truncnorm]; }; gmodels = derive2 { name="gmodels"; version="2.16.2"; sha256="0zf4krlvdywny5p5hnkr0r0hync6dvzc9yy4dfywaxmkpna8h0db"; depends=[gdata MASS]; }; gmp = derive2 { name="gmp"; version="0.5-13.1"; sha256="0xh9dli4i7hyjywsn2h780cxl3k7v0q421djyr1wshk7l9s5701g"; depends=[]; }; gmt = derive2 { name="gmt"; version="2.0-1"; sha256="1g1sj9gq3h3s0pdcfvzg7iifkns5azn3pa83if0d3yzc28cjf0yz"; depends=[]; }; - gmum_r = derive2 { name="gmum.r"; version="0.2.1"; sha256="127h76nm99ldpaznys5y4rnrvq0kh5pcsjmw21hz79a8rjni7r16"; depends=[BH ggplot2 httr igraph Matrix Rcpp RcppArmadillo SparseM]; }; gnFit = derive2 { name="gnFit"; version="0.1.0"; sha256="05hbzxxv8443w51mwpdcdk3gyc9bh8va6i65wydw7msdk69daqxs"; depends=[ismev rmutil]; }; gnlm = derive2 { name="gnlm"; version="1.1.0"; sha256="0fv89cvbnp9n3lgg6y4sqmz9jzcgwj7vd92rwg7hixwrjyqpan4z"; depends=[rmutil]; }; gnm = derive2 { name="gnm"; version="1.0-8"; sha256="1581lzkb1v3y0arrq7x1bg7c91cii87bifxcdi1jzyc5rxj261la"; depends=[MASS Matrix nnet qvcalc relimp]; }; gnmf = derive2 { name="gnmf"; version="0.7.1"; sha256="1vbcsxg61mlsdir8szd0rdxfswr7kr6a07750ar2l9b4rkg3yfqz"; depends=[]; }; + gnorm = derive2 { name="gnorm"; version="1.0.0"; sha256="17h43qwb07wk5hiif89k6dgn6bbdsqfy2jy3k5blbdhhp3b9jcqp"; depends=[]; }; gnumeric = derive2 { name="gnumeric"; version="0.7-8"; sha256="0iwl00mzsg8h8q67bjp6485idjlmj24362b1rbmkifckss8hrc98"; depends=[XML]; }; goalprog = derive2 { name="goalprog"; version="1.0-2"; sha256="1h3nd3d53hbz5hl3494lpfjnp1ddklc17nhgw18362jd1nk14awy"; depends=[lpSolve]; }; goeveg = derive2 { name="goeveg"; version="0.3.3"; sha256="1p66fc1vr09zxp1h81b8by2cldxn0q8vivcc5g3pggb65d9wj846"; depends=[fields mgcv vegan]; }; gof = derive2 { name="gof"; version="0.9.1"; sha256="1s12gga9d6yizn2y7lzql4jd80lp5jpyml8ybn7xqswp8am82vpg"; depends=[]; }; gofCopula = derive2 { name="gofCopula"; version="0.2-3"; sha256="1xigbv9mc0c1j3qc0nay0fjwmqvw91cy3x1z6m56bgkgfli7gp2l"; depends=[copula doParallel foreach MASS numDeriv R_utils SparseGrid VineCopula]; }; gofMC = derive2 { name="gofMC"; version="1.1.2"; sha256="0hbqx0z2517qgmp6sjg76hv74yrkfbswb9rmfjmsmcyzj2x67w86"; depends=[ggplot2 scales]; }; - gofastr = derive2 { name="gofastr"; version="0.2.1"; sha256="1a291bddhzk0wxrmk9dpiiv93h6si8s19v00wmypw0jfbrjhlc53"; depends=[data_table quanteda slam SnowballC tm]; }; + gofastr = derive2 { name="gofastr"; version="0.3.0"; sha256="02jn4xbbafl7siwvkqns1818wmw813x9cvqfcnpnmcippiqhrb0b"; depends=[data_table quanteda slam SnowballC tm]; }; goft = derive2 { name="goft"; version="1.3.4"; sha256="15n1av7r6w8hihxlgw9pd570qgrlcprkkacln15chvjs3b0i60la"; depends=[fitdistrplus]; }; goftest = derive2 { name="goftest"; version="1.1-1"; sha256="183imn6dy28ama8bywxgyh32vgakv7bsbz4k5qbhnlhqdvzv2v6v"; depends=[]; }; - goftte = derive2 { name="goftte"; version="1.0.4"; sha256="013xvnp88vir3jd7hn759xqkgp266kzp54105zy5j2a5nnpb4jxk"; depends=[survival]; }; + goftte = derive2 { name="goftte"; version="1.0.5"; sha256="0mqibs8kpj8qq3wpnlpfdzxx33q77clwli1q7yaxllwzbq0b99hw"; depends=[survival]; }; gogamer = derive2 { name="gogamer"; version="0.4.3"; sha256="0p11pxwc4vnmf2hh0zxv99qlqkqiszqawh8scw4v861i8ihp84iz"; depends=[dplyr ggplot2 gridExtra magrittr Rcpp scales stringr]; }; gogarch = derive2 { name="gogarch"; version="0.7-2"; sha256="03gpl73zc6kx4gni59xbg7b38dkpd7p4c7kvlqm46f58j257viik"; depends=[fastICA fGarch]; }; goldi = derive2 { name="goldi"; version="1.0.1"; sha256="191ac02bwrxr3khq6qirhxzfhv7pqfhqyg7jb473p5vwygpvc53l"; depends=[dplyr futile_logger magrittr Rcpp RcppArmadillo SnowballC tm]; }; gomms = derive2 { name="gomms"; version="1.0"; sha256="1i9d5y28wrhal990x7xxy99v3z9y2pzlakj7wnynd3dpx5pqr0jj"; depends=[]; }; - googleAnalyticsR = derive2 { name="googleAnalyticsR"; version="0.4.2"; sha256="0cj7ln3m2k7ihga8lyxc1rzb46qx184vklm76cfxc0s8q67z70ik"; depends=[assertthat dplyr googleAuthR httr magrittr memoise purrr rlang tidyr]; }; + googleAnalyticsR = derive2 { name="googleAnalyticsR"; version="0.5.0"; sha256="183wywvsfq58yn8hj6kz83c3by36w8knckndwbih2xhxqqqj3cf0"; depends=[assertthat dplyr googleAuthR httr magrittr memoise purrr rlang tidyr]; }; googleAuthR = derive2 { name="googleAuthR"; version="0.6.2"; sha256="14a236yz0610rh98f80prcnc2401zy52rw326wvk11ghl3w1f88z"; depends=[assertthat digest httr jsonlite memoise R6]; }; googleCloudStorageR = derive2 { name="googleCloudStorageR"; version="0.4.0"; sha256="1iwn0qjyxyg1xr1s492h7z2g5yzcfw8kasd4ghxmghnqvhzzf7vn"; depends=[assertthat curl googleAuthR httr jsonlite openssl yaml zip]; }; googleComputeEngineR = derive2 { name="googleComputeEngineR"; version="0.2.0"; sha256="1kslsi7gc4na8pm8dyizswf9pfpdq1rprn08rd7kbxsisclbzc7y"; depends=[assertthat future googleAuthR httr jsonlite]; }; googleLanguageR = derive2 { name="googleLanguageR"; version="0.1.1"; sha256="1r601s81dm18wb44r65ssx9kxdj849caykzpvwba1bk1xvpp4fni"; depends=[assertthat base64enc googleAuthR jsonlite magrittr purrr tibble]; }; + googlePolylines = derive2 { name="googlePolylines"; version="0.4.0"; sha256="041dmsi938y47287hdv30c99d8rxjwdc12d7s29shghh64h96y50"; depends=[BH Rcpp]; }; + googlePrintr = derive2 { name="googlePrintr"; version="0.0.1"; sha256="19rm78x8qd61ilc6h1kn3dw63m6dfsckqkd3n76krvi0akgl72w5"; depends=[googleAuthR httr jsonlite]; }; googlePublicData = derive2 { name="googlePublicData"; version="0.16.1"; sha256="15hyslpqvncg21q581h061rfyg99y8lavqw1x8hzl7xzd49bn9r5"; depends=[readxl XML]; }; googleVis = derive2 { name="googleVis"; version="0.6.2"; sha256="1idnp9ndgg2dwybdpw7q3pkaw9kw2vy2xkls9qykrpz1p6nf3mn1"; depends=[jsonlite]; }; googledrive = derive2 { name="googledrive"; version="0.1.1"; sha256="1fshv85s4ldw2kc7lbbdvrl260pz76z04awx1n6lg0f5xmba9rfg"; depends=[curl glue httr jsonlite purrr rlang tibble uuid]; }; googleformr = derive2 { name="googleformr"; version="0.0.3"; sha256="0smykcjyqmk61ws5jk462l8x5hg0h9nwq55q5pqfgcq1j3yfniqh"; depends=[httr rvest xml2]; }; googlesheets = derive2 { name="googlesheets"; version="0.2.2"; sha256="18q0xmxn09b52rmky7gr5flp0awndcnsgb7zcvkzvkrkvmwad52b"; depends=[cellranger dplyr httr jsonlite purrr readr stringr tidyr xml2]; }; - googleway = derive2 { name="googleway"; version="2.2.0"; sha256="11x8h5amczydh8d7wrqqwyk386k63kxhbbivb2gw1fi7ffyi24jb"; depends=[curl htmltools htmlwidgets jpeg jsonlite magrittr Rcpp shiny]; }; + googleway = derive2 { name="googleway"; version="2.4.0"; sha256="176jmwnn6k8w6078jcq9b4pzix70sbs118g28jpi4in4sznr1dvg"; depends=[curl googlePolylines htmltools htmlwidgets jpeg jqr jsonlite magrittr Rcpp scales shiny viridisLite]; }; goric = derive2 { name="goric"; version="0.0-95"; sha256="05sbsnjjlpy1z0mfbsrihrp2gp4d66cvprhgzxy76lipgm5mmvqi"; depends=[MASS Matrix mvtnorm nlme quadprog]; }; govStatJPN = derive2 { name="govStatJPN"; version="0.1"; sha256="03sywa7rl5rblvv370mfszz5ngp850qf32yydy1fdx10lv5amrfl"; depends=[]; }; gower = derive2 { name="gower"; version="0.1.2"; sha256="1mbrj1lam3jfbby2j32shmmj5cn09zx3rkxbamq7q8sdg39b54gb"; depends=[]; }; gpDDE = derive2 { name="gpDDE"; version="0.8.2"; sha256="100g2f8zlpbwxb46h62pgvidll8aflz1zl4inyh8dml6vhm9pilp"; depends=[CollocInfer deSolve fda forecast lars limSolve MASS nnls penalized trustOptim TSA]; }; - gpHist = derive2 { name="gpHist"; version="0.1"; sha256="137zsyln42nxdhi36p4ljvg9ib3wipxcbgkvcj8b8nx0vz9vk52z"; depends=[]; }; gpairs = derive2 { name="gpairs"; version="1.2"; sha256="09mkdbs9hklxnmqcsnf65s3dfsfcr7kppp6zxj08v5hxym1gpz3l"; depends=[barcode colorspace lattice MASS vcd]; }; gpclib = derive2 { name="gpclib"; version="1.5-5"; sha256="08j81b8wymsgin20n54gvm6m54rmdic51p6qzs9cz4pmgl7dkkjv"; depends=[]; }; gpg = derive2 { name="gpg"; version="0.5"; sha256="1l13wwmhayyhgl2m3r5f5p3m3y3z3pcj38liywx6a24hpxmir7pp"; depends=[curl]; }; @@ -6702,11 +6851,10 @@ in with self; { gpr = derive2 { name="gpr"; version="1.1"; sha256="03ywik11kc6cnaqrzzzi94jkrdbd378m3sf26f2vpb7d834nl728"; depends=[]; }; gptk = derive2 { name="gptk"; version="1.08"; sha256="0fk6c8f8fni4y2n2cbfwywlfyz74xlb8lx25wajsxr2v4x74pa7l"; depends=[fields Matrix]; }; gpuR = derive2 { name="gpuR"; version="2.0.0"; sha256="1aq9gmnl69yw7124nr8jaih7598gkknp7krmdsnx600i4k37yzjs"; depends=[assertive BH Rcpp RcppEigen RViennaCL]; }; - gputools = derive2 { name="gputools"; version="1.1"; sha256="0np1lndvppdi409a1kfbbl0z5hr8wg2q473jch58zd16d2ickwkb"; depends=[]; }; gqlr = derive2 { name="gqlr"; version="0.0.1"; sha256="0qvyvy514ma5wi2qm6a8praqa7js9wl0hh0ack1hknw33g2gyqhy"; depends=[graphql jsonlite magrittr pryr R6]; }; gquad = derive2 { name="gquad"; version="2.1-1"; sha256="19k7cqp2j5vb6m9hxdm951wfjh6nsswb64pdz9g93ypcqrg02wa4"; depends=[ape seqinr]; }; grImport = derive2 { name="grImport"; version="0.9-0"; sha256="1d8fd7502qj7cirjqdkr1qj51rylw2fz5hs06avfvc2dxs2xwfw1"; depends=[XML]; }; - gradDescent = derive2 { name="gradDescent"; version="2.0.1"; sha256="0kxyvr30hygg82s5m7nng02fvn6nak43y2v18445xbb05y6f5gmx"; depends=[]; }; + gradDescent = derive2 { name="gradDescent"; version="3.0"; sha256="1jxgvnjw9qk5bkb0fw4kyks4vb9d1933jn79ry0w6956mq2xbb79"; depends=[]; }; grade = derive2 { name="grade"; version="0.2-1"; sha256="085hfvqn880yk19axdjv3z9jr33kls212vs172a8mzhnkallph1r"; depends=[]; }; gradientPickerD3 = derive2 { name="gradientPickerD3"; version="0.1.0.0"; sha256="0b20iqfipr7migwk1fl4lvdf4ghprqivcgmchfshhr8q82hyd1q0"; depends=[htmlwidgets jsonlite shiny]; }; gramEvol = derive2 { name="gramEvol"; version="2.1-3"; sha256="0z2511zhs2gcdkwp29n6fpafhn49h69yi56nmrhh9zc8jqj1rwpa"; depends=[]; }; @@ -6714,6 +6862,7 @@ in with self; { granovaGG = derive2 { name="granovaGG"; version="1.4.0"; sha256="0khqlqc6jg9cpdq06g6jlpfjcw3m6rj40ipljfai8g1630ril6q4"; depends=[ggplot2 gridExtra plyr RColorBrewer reshape2]; }; grapes = derive2 { name="grapes"; version="1.0.0"; sha256="079b7w2xhb0a481s7qihhka0l9ydkjdph0865wjjkcbpr4775p26"; depends=[magrittr]; }; graphTweets = derive2 { name="graphTweets"; version="0.3.2"; sha256="13kab1nz85ghs5n882ss513di30b7lg72h676v37404ypj5a1vi1"; depends=[dplyr igraph reshape2]; }; + grapherator = derive2 { name="grapherator"; version="1.0.0"; sha256="071by9b8figbsf4g0f8a8mgcdksjksc57mnlgggilw7py1yjnjlh"; depends=[BBmisc checkmate deldir ggplot2 lhs reshape2 vegan]; }; graphicalVAR = derive2 { name="graphicalVAR"; version="0.2.1"; sha256="1z4x32ji71rq1x89r3wmjhm1fq7klggpz6c1cf45fvcd9qs6ykhk"; depends=[dplyr glasso glmnet igraph Matrix mvtnorm qgraph Rcpp RcppArmadillo]; }; graphicsQC = derive2 { name="graphicsQC"; version="1.0-8"; sha256="12vg93xfmkv73i19vkb10q2qngmsxd3y42z3l6izdywbdc3cdfkg"; depends=[XML]; }; graphkernels = derive2 { name="graphkernels"; version="1.4"; sha256="1dwk1bd2nx9kdzxq31cgynd75r7am49ygkaryb6iqcmva1wc5xs0"; depends=[igraph Rcpp RcppEigen]; }; @@ -6721,14 +6870,14 @@ in with self; { graphql = derive2 { name="graphql"; version="1.4"; sha256="103vggx9273dg4fkrhik4p1vj8qh7gxavyh933qxhajpmhnfhksh"; depends=[jsonlite Rcpp]; }; graphscan = derive2 { name="graphscan"; version="1.1.1"; sha256="1dgjb0grdymhimdgwnddjcivgy2i9r1i1nni4v9mx0447skcahk9"; depends=[ape rgl snowfall sp]; }; graticule = derive2 { name="graticule"; version="0.1.2"; sha256="1yvrijvyjilfql72dxj32b3sczqv065zj61729wrrzn63xcifvmb"; depends=[raster sp]; }; - grattan = derive2 { name="grattan"; version="1.5.2.5"; sha256="1v64m9jbh89imp29fl6lbnzmfj8lz24jhr6wlsmfz1wsplln8hf7"; depends=[assertthat data_table forecast hutils magrittr Rcpp RcppParallel rsdmx zoo]; }; - gravity = derive2 { name="gravity"; version="0.5"; sha256="0bn7pysy1ajmbihx15xj0pa3aba2qx5dmy78a0k0y1699x9hr465"; depends=[glm2 lmtest MASS multiwayvcov sandwich]; }; + grattan = derive2 { name="grattan"; version="1.5.3.5"; sha256="0cbgxjrw461zf8axsnl7rhi19gcji9s9d0h5s1bd89930l7ldqfg"; depends=[assertthat data_table fastmatch forecast hutils magrittr Rcpp RcppParallel rsdmx zoo]; }; + gravity = derive2 { name="gravity"; version="0.6"; sha256="15ngk6a5f6xjvisk6ma625iaw4ybg7722xgmnr4rnlmsgm95v668"; depends=[censReg glm2 lmtest MASS multiwayvcov sandwich survival]; }; grec = derive2 { name="grec"; version="1.1.1"; sha256="1qn1vbhlw42wqg9vj5plb12pg9xskn32z27ifyzm4kggp1vckgbf"; depends=[imagine raster]; }; greport = derive2 { name="greport"; version="0.7-1"; sha256="1h1g3khb30n3y8l1sxpas2s6s667az4yxvsq42x5dfx8fic42p6n"; depends=[data_table Formula ggplot2 Hmisc lattice latticeExtra rms survival]; }; - greta = derive2 { name="greta"; version="0.2.0"; sha256="0fp540an93h4a1bkmc42gj7j8hxdkw5zrcaj0mg64rahx0xn2dvq"; depends=[coda progress R6 reticulate tensorflow]; }; + greta = derive2 { name="greta"; version="0.2.3"; sha256="10vli747b5a1m53qszxk91wppg9511la9yc823qrr51s92z8i222"; depends=[coda progress R6 reticulate tensorflow]; }; grex = derive2 { name="grex"; version="1.7"; sha256="0bciyafqwx404axidz4dlj856mzy73ij5sifxhvbjnn07rx844c9"; depends=[]; }; greyzoneSurv = derive2 { name="greyzoneSurv"; version="1.0"; sha256="115i0d4fy4p4g4vd419hj9f23hi8cbiyfilgpgmag91ilr1xpcdp"; depends=[Hmisc survAUC survival]; }; - grf = derive2 { name="grf"; version="0.9.4"; sha256="0v5gz3kv7xiymbi0dvqbzyhfvmlyimcnqylbdp76dslgwhm03nk5"; depends=[Rcpp]; }; + grf = derive2 { name="grf"; version="0.9.5"; sha256="0i3x5h19n3cq8mchm3zwg3rgr1ywknkghsk50m70zcjpb4cdbsj6"; depends=[Matrix Rcpp RcppEigen]; }; gridBase = derive2 { name="gridBase"; version="0.4-7"; sha256="09jzw4rzwf2y5lcz7b16mb68pn0fqigv34ff7lr6w3yi9k91i1xy"; depends=[]; }; gridDebug = derive2 { name="gridDebug"; version="0.5-0"; sha256="12zrl7p8p7071w5viymdipycja7a2arvy0aahgahd5nlx1k1gha0"; depends=[graph gridGraphviz gridSVG]; }; gridExtra = derive2 { name="gridExtra"; version="2.3"; sha256="0fwfk3cdwxxim7nd55pn7m31bcaqj48y06j7an2k1v1pybk0rdl1"; depends=[gtable]; }; @@ -6745,7 +6894,7 @@ in with self; { groupdata2 = derive2 { name="groupdata2"; version="1.0.0"; sha256="11j5p3afr5qc227ljdwwwp17jzaylqlhc7g0gr3jvgrhjnijs2a0"; depends=[dplyr numbers plyr]; }; grouped = derive2 { name="grouped"; version="0.6-0"; sha256="1glxgacpwk7yjbkwg5ci6bmb2il6hf5zhydwi5bbq6hc032m9976"; depends=[MASS]; }; groupsubsetselection = derive2 { name="groupsubsetselection"; version="1.0.3"; sha256="118cj5xc8nbq4fs2gbzg1nhynixaflbl0si77gyy4ybw0drsz4nj"; depends=[]; }; - grove = derive2 { name="grove"; version="1.0"; sha256="1w8qz2k6m2xm0n699dj69aiagxy728q66bphxbmn71kakymvkgnz"; depends=[Rcpp RcppArmadillo wavethresh]; }; + grove = derive2 { name="grove"; version="1.1"; sha256="0fqsj5dx7py7cin3hvfkxglh8v3x0dwj6cxy4h5vbddjl687db5x"; depends=[Rcpp RcppArmadillo wavethresh]; }; growcurves = derive2 { name="growcurves"; version="0.2.4.1"; sha256="0h96c1hd6cdzc2l2a9dakmxn2hspvr0fpx9938iscm4hi9ds97m2"; depends=[Formula ggplot2 Rcpp RcppArmadillo reshape2]; }; growfunctions = derive2 { name="growfunctions"; version="0.13"; sha256="19ngsd326vws2f3wsrkcsyzn64fm9nnqvnbamfw6aal9xzzzz59m"; depends=[ggplot2 Matrix mvtnorm Rcpp RcppArmadillo reshape2 spam]; }; growth = derive2 { name="growth"; version="1.1.0"; sha256="0d1hc56ybp5chckqv5q5jvpgbl7xn9dkbc4dd4sz5gawn1hngbxm"; depends=[rmutil]; }; @@ -6755,7 +6904,6 @@ in with self; { growthrates = derive2 { name="growthrates"; version="0.7.1"; sha256="0ci846jgshnvrvifl8snyax8ljs9n13lr42mzm89l0gpkg6lh2g0"; depends=[deSolve FME lattice]; }; grpSLOPE = derive2 { name="grpSLOPE"; version="0.2.1"; sha256="1r9irf83f7szhkdqis2rakil8fsr3rqsfrj4dmbg3r3rnr8wl8nh"; depends=[SLOPE]; }; grplasso = derive2 { name="grplasso"; version="0.4-5"; sha256="15bqckq9qjdlllhfpb21vzgi9msbl544alkrz01w1vvb3hk1847y"; depends=[]; }; - grppenalty = derive2 { name="grppenalty"; version="2.1-0"; sha256="12hbghmg96dwlscjy6nspgkmqqj4vwq2qcwcz1gp50a08qbmdcrk"; depends=[]; }; grpreg = derive2 { name="grpreg"; version="3.1-2"; sha256="042waw813jfc163376019zd7ngwrmrr26z17c2kw7ggvp1vz5m9q"; depends=[Matrix]; }; grpregOverlap = derive2 { name="grpregOverlap"; version="2.2-0"; sha256="1kq8wxpx21irwckndgfkzdy5jgzf7pmcwpclmjzjxznv6cyaikd0"; depends=[grpreg Matrix]; }; grpss = derive2 { name="grpss"; version="3.0.1"; sha256="01bjjhv3vkvn5h363g5a9dlm7kzq10q7ixmrc0kkq5hsbs31vl3x"; depends=[doParallel foreach grpreg MASS]; }; @@ -6781,6 +6929,7 @@ in with self; { gsw = derive2 { name="gsw"; version="1.0-5"; sha256="0lv4x4is53xybgg205dncizpnqnakqk47b5wgys2kr4ixqc8jipb"; depends=[testthat]; }; gsynth = derive2 { name="gsynth"; version="1.0.6"; sha256="0fzdlflrl9qlvbzjdspws3naabwyphwqys01wp4wkw5y7whq0mar"; depends=[abind doParallel foreach GGally ggplot2 mvtnorm Rcpp RcppArmadillo]; }; gt4ireval = derive2 { name="gt4ireval"; version="2.0"; sha256="1d567iz57xqszm45l1wq4n2qrrmyz8ssll1vllfmncb9ibbnx4f3"; depends=[]; }; + gtWAS = derive2 { name="gtWAS"; version="1.0.0"; sha256="1pk7m1apgksbh8a3xb94aj3wp9dbcv5rm6brdcjb5fsgxj7iaq5c"; depends=[]; }; gtable = derive2 { name="gtable"; version="0.2.0"; sha256="0vz7073m0a2q12qzzihrfh5c2kx5jqi5l7z470fxmwqghdllh7l0"; depends=[]; }; gtcorr = derive2 { name="gtcorr"; version="0.2-1"; sha256="1n56zmyv58jwr95p453jb86j82pdnq57gfc8m15jndjc9p31zl0m"; depends=[]; }; gte = derive2 { name="gte"; version="1.2-2"; sha256="1x528iakyjhh4j92cgm6fr49a3rdi4cqy28qhsfr2dwvxzxchl6h"; depends=[survival]; }; @@ -6792,7 +6941,7 @@ in with self; { guess = derive2 { name="guess"; version="0.1"; sha256="198pxi0yipgm9wccpj3y4a0gkibhyxcmb7v5dz7ipzrk44ha5g6j"; depends=[Rsolnp]; }; gumbel = derive2 { name="gumbel"; version="1.10-1"; sha256="12rkri8bvgjn0ylf1i4k9vpb8mvbasidvx2479kmis2rc1p07qq7"; depends=[]; }; gunsales = derive2 { name="gunsales"; version="0.1.2"; sha256="02vz16lhym72vvf48yai1g371wygdlmi63a6ylc147l0b69jgw31"; depends=[data_table dplyr ggplot2 seasonal x13binary zoo]; }; - gutenbergr = derive2 { name="gutenbergr"; version="0.1.3"; sha256="1x4db2dgnqi17w5rdx46v78j6055vqp8nnh7m87yq7j7b3d1r9gi"; depends=[dplyr lazyeval purrr readr stringr urltools]; }; + gutenbergr = derive2 { name="gutenbergr"; version="0.1.4"; sha256="1xf9h0ikfzgq6bzzxa7wih29cgbfk6lgdv041fprxbd9rz38agi9"; depends=[dplyr lazyeval purrr readr stringr urltools]; }; gvc = derive2 { name="gvc"; version="0.5.2"; sha256="0cfvli6ap5kw3agv94d7g7rhmlxd66yyngc7c9pl4fsxf7sm6nx4"; depends=[decompr diagonals]; }; gvcm_cat = derive2 { name="gvcm.cat"; version="1.9"; sha256="1kwfcmnl1ivv1lh3zxccwls2xfyx3l8v71ngc0bg6441i81d4xp5"; depends=[MASS Matrix mgcv]; }; gvlma = derive2 { name="gvlma"; version="1.0.0.2"; sha256="0gj52hg665nmlwgbjh9yvz7a3sbzlbj41ksxchnnlxaxipdf6sl8"; depends=[]; }; @@ -6803,11 +6952,12 @@ in with self; { gwrr = derive2 { name="gwrr"; version="0.2-1"; sha256="1fjk217pimnmxsimqp9sn02nr1mwy3hw3vsr95skbfsd6vdda14d"; depends=[fields lars]; }; gym = derive2 { name="gym"; version="0.1.0"; sha256="0vcwzgawqwjsf65hr1mbjkz3px8zsibfkn42jpsg39n13jpfjq8v"; depends=[httr jsonlite]; }; gyriq = derive2 { name="gyriq"; version="1.0.2"; sha256="12vbnhianzi4l43czaxrbnbkz1h8lvmwjys0y3c2ml3g6dmwwfji"; depends=[CompQuadForm irlba mvtnorm survival]; }; - h2o = derive2 { name="h2o"; version="3.16.0.1"; sha256="1f4h1js70vcv6v7ncap5yfhzzzd0r3bk6limj8bzn2h3mnkck39z"; depends=[jsonlite RCurl]; }; + h2o = derive2 { name="h2o"; version="3.16.0.2"; sha256="181rm5y7wwmpzi45sy62blr6jk9wfbs3j14ansmh7ad1rbml3zm3"; depends=[jsonlite RCurl]; }; h5 = derive2 { name="h5"; version="0.9.9"; sha256="14p7i1sj24ky87kd7qr3n9fc9l64s0bp0rwbyl6i2x69xn75gpsx"; depends=[Rcpp]; }; - hBayesDM = derive2 { name="hBayesDM"; version="0.4.0"; sha256="0x7lpfx3d559fzkmrj3fb057zb3jm2y5l55zaqy0w7pnzgdpqnh6"; depends=[ggplot2 loo mail Rcpp rstan rstantools]; }; + hBayesDM = derive2 { name="hBayesDM"; version="0.5.0"; sha256="174z98jvi04df04lpdxh3j8lmjvgrg287nxfnrcvjkibc0jiss4m"; depends=[ggplot2 loo Rcpp rstan rstantools]; }; hIRT = derive2 { name="hIRT"; version="0.1.2"; sha256="0pqp6bycr13di1hbi5sqnkiannz2hyg0ysshswv2i9fp0vkhdhqf"; depends=[pryr rms]; }; hNMF = derive2 { name="hNMF"; version="0.4"; sha256="1ivj9danq3mp6mkrm6mdd529rmzb0qhl38lgij76ma2j9fkw35zq"; depends=[NMF nnls oro_nifti R_matlab rasterImage spatialfil]; }; + hR = derive2 { name="hR"; version="0.1.1"; sha256="18a9nhnsw7va1ambj2lc99ralhildc3a2l6xpilfanig4pg7cq08"; depends=[data_tree reshape2 visNetwork]; }; hSDM = derive2 { name="hSDM"; version="1.4"; sha256="1jq6hdnyv446ng62srip0b48kccf0qw3xqym3fprg74mjdy3inqr"; depends=[coda]; }; haarfisz = derive2 { name="haarfisz"; version="4.5"; sha256="1qmh4glwzqwqx3pvxc71rlcimp1l0plgdf380v9hk0b4gj7g3pkf"; depends=[wavethresh]; }; hail = derive2 { name="hail"; version="0.1.1"; sha256="1nrc9msqyy5iq2i6p8875anbqswxl2z6vdd4hvihnl22qh5fnbvh"; depends=[]; }; @@ -6823,7 +6973,7 @@ in with self; { happybiRthday = derive2 { name="happybiRthday"; version="0.0.1"; sha256="0rrvi5kx09p74xwxvqcwibbh4qjlk4jxb89grx74chjxk9ak2yv8"; depends=[data_table dplyr gh lubridate tidyr]; }; hapsim = derive2 { name="hapsim"; version="0.31"; sha256="0jw6iw89d4y8wjy58biv40szp123ql7frz1mmdjdxljmwaby963h"; depends=[MASS]; }; harmonicmeanp = derive2 { name="harmonicmeanp"; version="1.0"; sha256="071ysgyi8daq8q1vqzgypkz4bgaxr0iw4djv906vkfx5ywihr768"; depends=[FMStable]; }; - harrietr = derive2 { name="harrietr"; version="0.2.2"; sha256="1h6i9ls33h0dgncq6i33ig04yq7i1wy1cl1xx2nvbp78ig02klng"; depends=[ape dplyr ggplot2 ggtree lazyeval magrittr tidyr]; }; + harrietr = derive2 { name="harrietr"; version="0.2.3"; sha256="0n6vsqysj4ijh06z6nqmj8x1z4w9711dxhbfp8p8fwi0l75pj0cj"; depends=[ape dplyr ggtree lazyeval magrittr rlang tidyr]; }; harvestr = derive2 { name="harvestr"; version="0.7.1"; sha256="0xgxzbfbc33asfm8sl2y60ki6bwgd6vdh9nz466crkx7m9lsvll8"; depends=[digest foreach plyr]; }; hash = derive2 { name="hash"; version="2.2.6"; sha256="0mkx59bmni3b283znvbndnkbar85fzavzdfgmwrhskidsqcz34yz"; depends=[]; }; hashFunction = derive2 { name="hashFunction"; version="1.0"; sha256="1v57xj8xwv6xhxvgp0zxgvs5vcjw8z5k2ciwbn0jxf4ilyd66cgj"; depends=[]; }; @@ -6831,7 +6981,7 @@ in with self; { hashmap = derive2 { name="hashmap"; version="0.2.2"; sha256="1qypmyi033rjxjk055rv94qfqa99gm5hj5gfd9fiiq1xln3z700j"; depends=[BH Rcpp]; }; hashr = derive2 { name="hashr"; version="0.1.0"; sha256="1ri2zz2l1rrc1qmpqamzw21d9y06c7yb3wr60izw81l8z4mmyc3a"; depends=[]; }; hasseDiagram = derive2 { name="hasseDiagram"; version="0.1.3"; sha256="1r9z6jc9lbdj2xc81gpnbswrl8rhs8zrlsnypfrny40g3j402iap"; depends=[graph Rgraphviz]; }; - haven = derive2 { name="haven"; version="1.1.0"; sha256="068x009dygwh8d3lg4i4p0h3lvzrk4bh78yh92y0lcjzjp8b97q8"; depends=[forcats hms Rcpp readr tibble]; }; + haven = derive2 { name="haven"; version="1.1.1"; sha256="1fkcvsrnw8waqwggv0aydbvbi99x5kp9g78xfxj4w6s3xvdzcysz"; depends=[forcats hms Rcpp readr tibble]; }; hawkes = derive2 { name="hawkes"; version="0.0-4"; sha256="1ghwq3icxwmrai3xn9r8cnvlh3z3j18lznhw1bm31h9mkkp2dk0a"; depends=[Rcpp RcppArmadillo]; }; hazus = derive2 { name="hazus"; version="0.1"; sha256="1c0ahjdy9di1683nk5k4rmr6rhb66523ny039nyv842rgqdy625j"; depends=[reshape2]; }; hbdct = derive2 { name="hbdct"; version="1.0.1"; sha256="1lmbhl757hdswfq3skwbwsgxpfgim8475d9hk511dbwrzcm6wsxr"; depends=[]; }; @@ -6844,27 +6994,26 @@ in with self; { hcp = derive2 { name="hcp"; version="0.1"; sha256="0hhcy70g13kclxv733kgiys7qn5bi28abpkli5n2vj0a58ac333m"; depends=[]; }; hda = derive2 { name="hda"; version="0.2-14"; sha256="0azfxyws7yslcqplfddmdp5ngk91j5h7llvrg77yh5z0kkd09j1b"; depends=[e1071]; }; hddplot = derive2 { name="hddplot"; version="0.57-5"; sha256="01ljwb4glignq78gpm3n8ap8ws1ss7ibdy7ybdvhnm5zj6nnvjpp"; depends=[MASS multtest]; }; - hddtools = derive2 { name="hddtools"; version="0.7"; sha256="0acvdysyyv5i109adh1prrc9ifwadb0gk303hh3b0g69wysnmhl8"; depends=[gdata Hmisc raster RCurl rgdal rnrfa sp stringr tibble XML zoo]; }; hdeco = derive2 { name="hdeco"; version="0.4.1"; sha256="04nggwckvn1kwi238qd33l4pryzn4aq5bmi30bvfi99gwnrlgfgq"; depends=[]; }; hdf5r = derive2 { name="hdf5r"; version="1.0.0"; sha256="1s6p4cj909kc635fh5xpl87bqlcdj3dn3r1wk5g40abimk2b0pva"; depends=[bit64 R6]; }; hdi = derive2 { name="hdi"; version="0.1-6"; sha256="1lzy4jcz14j1qi6z4j1sq7z3z75n8jygnzlvqjf45vn1sqil17cq"; depends=[glmnet linprog MASS scalreg]; }; hdlm = derive2 { name="hdlm"; version="1.3.1"; sha256="1zl6bksw0apkmn5shf8qjpxjyx6vb40dc4m4db76hhn5nhcp10ic"; depends=[foreach glmnet iterators MASS Matrix]; }; - hdm = derive2 { name="hdm"; version="0.2.0"; sha256="01zd3b44c0rnwxwxcmsgj7w0clq4h7wrlzy4yiwvxcifiv8mgp8l"; depends=[checkmate Formula ggplot2 glmnet MASS]; }; + hdm = derive2 { name="hdm"; version="0.2.3"; sha256="0nj7pbkygzbiraw1b3pqv3bnkjhi1a0h48q0zgkcq8y79kj2f8cl"; depends=[checkmate Formula ggplot2 glmnet MASS]; }; hdnom = derive2 { name="hdnom"; version="4.9"; sha256="11yzjfp6b4apn0nyqmi0qm5rd8xy49w6hwwiq7p566mxqy32i2j2"; depends=[foreach ggplot2 glmnet gridExtra ncvreg penalized rms survAUC survival]; }; hdpca = derive2 { name="hdpca"; version="1.0.0"; sha256="1sv7caw4nhpcvsb7fxpvf2b5zskvfsv004hrqc51b5jx4fsc7y92"; depends=[boot lpSolve]; }; - hdrcde = derive2 { name="hdrcde"; version="3.1"; sha256="027nxpzk1g0yx8rns7npdz30afs5hwpdqjiamc7yjrsi0rzm71lw"; depends=[ash KernSmooth ks locfit mvtnorm]; }; + hdrcde = derive2 { name="hdrcde"; version="3.2"; sha256="1901mg2k2ch9fzn1n9k0kmxkgd1m4pxvrda7mv0mp64nf4mx43xw"; depends=[ash ggplot2 KernSmooth ks locfit RColorBrewer]; }; hds = derive2 { name="hds"; version="0.8.1"; sha256="1smg5ixrl7f2x3wn7s5i26dyadn5sigpf4jsk236z1bhnz617ax4"; depends=[survival tensor]; }; - healthcareai = derive2 { name="healthcareai"; version="1.2.0"; sha256="1piqbmx9w6aij8dkj80i0y9kryk5cmj3wb5gcgapasb4d09qkndp"; depends=[caret data_table DBI doParallel dplyr e1071 grpreg lme4 odbc pROC R6 ranger ROCR RSQLite xgboost]; }; + healthcareai = derive2 { name="healthcareai"; version="1.2.4"; sha256="0ksanvwfdz8xdfqdkjb4i65q7x9jdrjl4z4qwsff16zfg6sj7q2c"; depends=[caret data_table DBI doParallel dplyr e1071 ggplot2 grpreg lme4 odbc pROC R6 ranger ROCR RSQLite xgboost]; }; heatex = derive2 { name="heatex"; version="1.0"; sha256="0c7bxblq24m80yi24gmrqqlcw8jh0lb749adsh51yr6nzpap6i9n"; depends=[]; }; heatmap_plus = derive2 { name="heatmap.plus"; version="1.3"; sha256="0rzffm15a51b7l55k0krk6w7v8czy3vpwz1qmbybr7av0pln7wn3"; depends=[]; }; heatmap3 = derive2 { name="heatmap3"; version="1.1.1"; sha256="14zkij0gr9awzic71k2j7pniamkywfvwrifdk7jbds70zsi30ph5"; depends=[fastcluster]; }; heatmapFit = derive2 { name="heatmapFit"; version="2.0.4"; sha256="1rswp1wp58f21fpyjybcvvmnn53kr54ij83hp05qbvl7yn1fsnrb"; depends=[]; }; - heatmaply = derive2 { name="heatmaply"; version="0.13.0"; sha256="13m3w0894zalgxpdpz6mynn620cx0lrf4chp1bnki2c0lqwpk033"; depends=[assertthat colorspace dendextend ggplot2 gplots htmlwidgets magrittr plotly RColorBrewer reshape2 scales seriation viridis webshot]; }; - heavy = derive2 { name="heavy"; version="0.38.1"; sha256="12s4g0m5qi4yg26p9l3qay1gfhixma66ls0kf8lkaswzgd7761hp"; depends=[]; }; + heatmaply = derive2 { name="heatmaply"; version="0.14.1"; sha256="03p2caclhfgqgpx3wwck5h06jy3mxgs05gjmwkb7hmwghkjh41jc"; depends=[assertthat colorspace dendextend ggplot2 gplots htmlwidgets magrittr plotly RColorBrewer reshape2 scales seriation viridis webshot]; }; + heavy = derive2 { name="heavy"; version="0.38.19"; sha256="15bg2qqkslkqfnsq3ixbgmq72xagh8laji0265l06xgf2l6045kx"; depends=[]; }; heemod = derive2 { name="heemod"; version="0.9.2"; sha256="0qln5c4m11vxpsa0l07qrzs006b05hsl342pc5dgz0hwdpn5dd9j"; depends=[dplyr ggplot2 lazyeval memoise mvnfast plyr pryr tibble]; }; hei = derive2 { name="hei"; version="0.1.0"; sha256="1cvwdkm5c9p3cfgpgdj0r7222mzz1jghq2i5f20xh3786gx05sqd"; depends=[nhanesA]; }; - heims = derive2 { name="heims"; version="0.2.4"; sha256="07w5qy0fn7f2lz6zq52fxa2zgjfddga4p3x3c7rmq83jilhasppl"; depends=[bit64 data_table dplyr fastmatch fst lubridate magrittr]; }; - helixvis = derive2 { name="helixvis"; version="0.1.0"; sha256="1ycvgjbcghbdaw65v3b81pxf33226lr4cbk5l943jg7m738qsfhd"; depends=[rJava]; }; + heims = derive2 { name="heims"; version="0.4.0"; sha256="0vnq31jwn09grni4gdhf1hzd87b62as4f65b2qw7ky6mi38ahr5d"; depends=[bit64 data_table fastmatch hutils lubridate magrittr]; }; + helixvis = derive2 { name="helixvis"; version="0.2.0"; sha256="02ypsh6qjbdcnvj4bh71ghc9igsp50sj2dvc0qvk6nlbdg7cfhlz"; depends=[rJava]; }; hellno = derive2 { name="hellno"; version="0.0.1"; sha256="1j787rw9hh75bvkckmlz5xkgwc22gd7si3mgjd7v60dd6lykfa88"; depends=[]; }; helloJavaWorld = derive2 { name="helloJavaWorld"; version="0.0-9"; sha256="1a8yxja54iqdy2k8bicrcx1y3rkgslas03is4v78yhbz42c9fi8s"; depends=[rJava]; }; helsinki = derive2 { name="helsinki"; version="0.9.29"; sha256="0bn5iyxjn9qs6f0dmhv51ssayywbx1rayh80zbzk0gsm94nhs0d9"; depends=[maptools RCurl rjson sp]; }; @@ -6873,14 +7022,15 @@ in with self; { hergm = derive2 { name="hergm"; version="3.1-0"; sha256="17mxn2ff7yzj95vjsppvz7c9a5g6a2z9zyf34xvvxp9031zhrf46"; depends=[ergm latentnet mcgibbsit network sna]; }; heritability = derive2 { name="heritability"; version="1.2"; sha256="18snrfsjj5jw5qicj92d5qch9v4ciqw1hbiwg6q8kfjka9nmqpma"; depends=[MASS]; }; hermite = derive2 { name="hermite"; version="1.1.1"; sha256="0ns8l1rf346qxalfdwc7ny0kjp212f6qnnlgillpyvd8k29kg8iy"; depends=[maxLik]; }; + hesim = derive2 { name="hesim"; version="0.1.0"; sha256="002phncl1glv3c3gwp9ifpk56j06rka26a3774xlj3zcs6izglns"; depends=[data_table Rcpp RcppArmadillo]; }; het_test = derive2 { name="het.test"; version="0.1"; sha256="08kxp81dx32anh0k5b65x7w7madwnn9hiabdrk6ck6b6mx37x26v"; depends=[vars]; }; - hetGP = derive2 { name="hetGP"; version="1.0.0"; sha256="0nf0r6i1ibwg4a1wnjbgwa2xda6lbrhny2f60zkc79igd60rjdnb"; depends=[DiceDesign MASS Rcpp]; }; + hetGP = derive2 { name="hetGP"; version="1.0.2"; sha256="0dffkn11pm1x5jafc7yzy0jh4c2qqipfzhw205qiqxk5gny185k8"; depends=[DiceDesign MASS Rcpp]; }; hetmeta = derive2 { name="hetmeta"; version="0.1.0"; sha256="023bdjsv0ibisz47vaap9yamzjna4hhndk3haw2g1cm92wnrdra5"; depends=[metafor]; }; hett = derive2 { name="hett"; version="0.3-1"; sha256="1y0hr9g2pjwzc5azh095h33qidxhhmlvd1csamjnhwdphj5drzz0"; depends=[lattice MASS]; }; heuristica = derive2 { name="heuristica"; version="1.0.1"; sha256="1myivlqw6a8wh97ma9lrpgvaqb0vn4kj8yp9r4z5vc4pxgmm48g6"; depends=[Hmisc]; }; - hexSticker = derive2 { name="hexSticker"; version="0.4.1"; sha256="1qp2rlvmf1qjq3sydl1lmlx4a6wmgsx9ja1dwbrl31ldp40n223m"; depends=[ggimage ggplot2 gridGraphics hexbin showtext sysfonts]; }; + hexSticker = derive2 { name="hexSticker"; version="0.4.2"; sha256="1dhxx8g1yv22wkzz4alpxrgg1rhribq70yxgpn01yq7jbhn2vyk0"; depends=[ggimage ggplot2 hexbin showtext sysfonts]; }; hexView = derive2 { name="hexView"; version="0.3-3"; sha256="0cx5hl70sk1wk24na21vjyv50b2358z1plvvcw604qf1zij4icwn"; depends=[]; }; - hexbin = derive2 { name="hexbin"; version="1.27.1"; sha256="0xi6fbf1fvyn2gffr052n3viibqzpr3603sgi4xaminbzja4syjh"; depends=[lattice]; }; + hexbin = derive2 { name="hexbin"; version="1.27.2"; sha256="0lpfl0015lg5x7lvv9dr302bca22c7fs91pnd896ypgpzqg7pm26"; depends=[lattice]; }; hextri = derive2 { name="hextri"; version="0.6"; sha256="05rvigi225npncbr1brc6apc7gsg9a5jzcbmhvflwp3hbcg3hn02"; depends=[FNN hexbin]; }; hflights = derive2 { name="hflights"; version="0.1"; sha256="1rb6finck13i6949i6hsgfk90q4ybxh1m3is2mlw2m6087bpzfbd"; depends=[]; }; hgam = derive2 { name="hgam"; version="0.1-2"; sha256="1flcc67n8kbh9m5phdfl587xg1x935zbp305y0gdmkc8vpkiwpcf"; depends=[grplasso lattice rgl]; }; @@ -6898,7 +7048,6 @@ in with self; { hierarchicalDS = derive2 { name="hierarchicalDS"; version="2.9"; sha256="0ckxy4pww5iik4m4kqs714f00g7lfzsarjdbpd0bcalvq4lmaal2"; depends=[coda ggplot2 Matrix mc2d mvtnorm rgeos truncnorm xtable]; }; hierarchicalSets = derive2 { name="hierarchicalSets"; version="1.0.2"; sha256="0m5mnx1zmiscj0k1gnljr7fla4y1qhysi32a8q9jlah2q7grk7x9"; depends=[ggdendro ggplot2 gtable MASS Matrix RColorBrewer Rcpp scales]; }; hierband = derive2 { name="hierband"; version="1.0"; sha256="0d95hrgkd8b5sww3wsgs6v9zg9pm71ick8x8kj8d6vyib350h6yn"; depends=[]; }; - hierformR = derive2 { name="hierformR"; version="0.1.0"; sha256="0ym6i5ajp55mmk085slmma3g5xqgdk0d0gba28fdg3csxsxl9w1r"; depends=[igraph]; }; hierfstat = derive2 { name="hierfstat"; version="0.04-22"; sha256="1fav2v2996v5kb1ffa6v5wxfm921syxg6as034vd3j4jfhdibyfx"; depends=[ade4 adegenet gtools]; }; hiertest = derive2 { name="hiertest"; version="1.1"; sha256="17maf1w4vkqknxff3f00fzv136j3dbbigyzl4vq4sln9j27w10r3"; depends=[]; }; highD2pop = derive2 { name="highD2pop"; version="1.0"; sha256="1s4v6m2d3vzvxsgmjzczv1zj3kv3ygvv6gbkkbjwsdhkvc1rdmf0"; depends=[fastclime]; }; @@ -6907,29 +7056,29 @@ in with self; { highcharter = derive2 { name="highcharter"; version="0.5.0"; sha256="1myypff80mxcgc3j0sflalhqz344c2zz2p90aarli1pbys9v8ynp"; depends=[assertthat broom dplyr htmltools htmlwidgets igraph jsonlite lubridate magrittr purrr quantmod rlist stringr tibble tidyr xts zoo]; }; highfrequency = derive2 { name="highfrequency"; version="0.5.2"; sha256="1bjqjf4ki7r21mwlhrd83v8k6lknrypkl9wrax9ccr7fln7ha7wn"; depends=[BMS chron cubature FKF MASS mvtnorm numDeriv robustbase rugarch sandwich timeDate xts zoo]; }; highlight = derive2 { name="highlight"; version="0.4.7.2"; sha256="0xc1akglgby3qd6c9y2rhcd0gpfihx5jvakji38vzlxb1m21sn10"; depends=[]; }; - highlightHTML = derive2 { name="highlightHTML"; version="0.1.1"; sha256="0kjs01ml4v57956rk3ch8y8kxni36gymkf830skxh4fj4nsr8hs1"; depends=[]; }; + highlightHTML = derive2 { name="highlightHTML"; version="0.2.1"; sha256="06k2idx9aadjd6xp6kadm9jh7ap1hwg7vh0bc8vw9ll82wcp1nv1"; depends=[]; }; highmean = derive2 { name="highmean"; version="3.0"; sha256="1lq7z0l1737j4wvsy7951405afylyywp7vf2i7girzh459fdfzpc"; depends=[MASS mnormt mvtnorm]; }; highr = derive2 { name="highr"; version="0.6"; sha256="0n9v44dxdy5fhkdmpbpa2p78whyd9z3rhhy42ipdz5m5vsr55qa3"; depends=[]; }; highriskzone = derive2 { name="highriskzone"; version="1.4-2"; sha256="1q9y34nj73kg5y6qy4kb023vyzbdb0f6x23asq20bj5pmz2l25y1"; depends=[deldir fields ks Matrix mvtnorm rgeos spatstat]; }; hillmakeR = derive2 { name="hillmakeR"; version="0.2"; sha256="1baynibgn4xqmpsxna8irggxvdc484mq5nza00rwg58vh1bc7wzq"; depends=[]; }; hindexcalculator = derive2 { name="hindexcalculator"; version="1.0.0"; sha256="06b4dn629avmnyqxb0l39m00wz9cg9dddmm6qhgwgnzlxh14ifgk"; depends=[]; }; hint = derive2 { name="hint"; version="0.1-1"; sha256="1n18j2hcb1qynhsln10nzryi20l5aqhr7i1aanww10y5dz573zi3"; depends=[]; }; - hisemi = derive2 { name="hisemi"; version="1.1-0"; sha256="17qd0wzbap5gammaahyxg9lifznzzv65k8iqiyc8y1xw4ayq3cw7"; depends=[fda Iso Matrix]; }; hisse = derive2 { name="hisse"; version="1.8.5"; sha256="1lhxj0cz3sdidpafll64fg1797y0472yxcr21dp2b83qbygkwfgl"; depends=[ape data_table deSolve GenSA nloptr phytools subplex]; }; histmdl = derive2 { name="histmdl"; version="0.6-1"; sha256="0vgfy49hrjcm3f8l2hb0fbn1ydh94g4xq2s116yf2c9pd0pwsbi1"; depends=[]; }; histogram = derive2 { name="histogram"; version="0.0-24"; sha256="1jihw92zi5a4dj6lzm1qvkynv9fp6j5iy83g8rzikp276x63nb62"; depends=[]; }; historydata = derive2 { name="historydata"; version="0.1"; sha256="1h69x3iig542d43p9zm8x83p4dq48iwsw606j4fndnqhx99vzkw6"; depends=[]; }; + histry = derive2 { name="histry"; version="0.1.2"; sha256="1m9zpqwzq7sqv4wpj2xxf0ndvz3cqk3bi8xq9n75z6b8q2lr74j8"; depends=[evaluate fastdigest]; }; hit = derive2 { name="hit"; version="0.4.0"; sha256="1vyla7jlg61rlrmqjb1wya404xj90xys175h12qy30paxsl5icqz"; depends=[glmnet Rcpp speedglm]; }; hitandrun = derive2 { name="hitandrun"; version="0.5-3"; sha256="0cmn8rzgksnygqwa5pngbdc6pds3kxx4y7mq3mg3xk1vys9b6r4n"; depends=[rcdd]; }; hive = derive2 { name="hive"; version="0.2-0"; sha256="0ywakjphy67c4hwbh6prs4pgq5ifd8x8inxjkigjiqz6jx3z852v"; depends=[rJava XML]; }; - hkclustering = derive2 { name="hkclustering"; version="1.0"; sha256="1xzzrvm847n1k2q2sg5dir5wgnix76arq4my211y8l0n1d5b2q38"; depends=[cluster]; }; + hkclustering = derive2 { name="hkclustering"; version="1.0.1"; sha256="19syq06y5dl0mcwyaxr7w1hj8ffp5s140j72djcz0lljhskzmp6f"; depends=[cluster]; }; hkevp = derive2 { name="hkevp"; version="1.1.4"; sha256="01m5yywi4vjnwhdayaqaqcp5lz70mllj5ifnwdb4c60wm9aby9pm"; depends=[Rcpp RcppArmadillo]; }; hkex_api = derive2 { name="hkex.api"; version="0.1"; sha256="0hqwihlrppchpaz2yaq92gf779yi5k8n7sxy1kbpjxs2qc18xvj2"; depends=[httr RCurl XML]; }; hmeasure = derive2 { name="hmeasure"; version="1.0"; sha256="0wr0xq956glmhvy4yis3qq7cfqv9x82ci9fzx3wjvaykd16h0sx9"; depends=[]; }; - hmi = derive2 { name="hmi"; version="0.8.1"; sha256="03y8hb503q6ry3dk2vlanjdi3mp38fprpxxzm55rrvmhb6zac3l3"; depends=[boot coda linLIR lme4 lmtest MASS Matrix MCMCglmm mice msm mvtnorm nnet pbivnorm tmvtnorm]; }; + hmi = derive2 { name="hmi"; version="0.9.5"; sha256="10ss4a8ywmmsxdsial1jxcydj1fg28qmbmxv9bhdw2zf1clacmbp"; depends=[boot coda linLIR lme4 lmtest MASS Matrix MCMCglmm mice msm mvtnorm nlme nnet ordinal pbivnorm tmvtnorm VGAM]; }; hmm_discnp = derive2 { name="hmm.discnp"; version="0.2-4"; sha256="096flx2b9s66dasqj05zrkxsmg3lj6j5w0pwrw3b1qkpp9dvlrkb"; depends=[]; }; hmmm = derive2 { name="hmmm"; version="1.0-3"; sha256="0yjx5i13jbv7vzxn84m6305124ri7jnym0bxbdj46s6l7lw025a9"; depends=[MASS mvtnorm quadprog]; }; - hms = derive2 { name="hms"; version="0.4.0"; sha256="07sh75flp15lx2b00s3nxh04xr9gk4qhlbh125qx25isf71zw6zl"; depends=[pkgconfig rlang]; }; + hms = derive2 { name="hms"; version="0.4.1"; sha256="0vr7k3a7k52a5yf67bwzl88lkjz09v1avw5axdk1y9v3nz33zl2h"; depends=[pkgconfig rlang]; }; hnp = derive2 { name="hnp"; version="1.2-4"; sha256="14w2n95pgi5h71fag4ndrc82z7q26za99vj5z99rv19l5jkvmd46"; depends=[MASS]; }; hoa = derive2 { name="hoa"; version="2.1.4"; sha256="15klcpmja4afwmpfxrxgrfis0vj7fil8k15jc3p0lqz3dhvq0dvf"; depends=[statmod survival]; }; hoardeR = derive2 { name="hoardeR"; version="0.9.2"; sha256="0sss3ki2w0aqyp084pprycw8d8vgm60z41iq6g9nxhqhr9xy5kdw"; depends=[bamsignals Biostrings data_table GenomicRanges GenomicTools httr IRanges MASS R_utils RCurl Rsamtools seqinr stringr XML]; }; @@ -6939,12 +7088,12 @@ in with self; { homals = derive2 { name="homals"; version="1.0-6"; sha256="1xfpb6mxfk18ad2fggljr2g01gy4c290axc3vgwngmmimmcvh4cy"; depends=[ape rgl scatterplot3d]; }; homeR = derive2 { name="homeR"; version="0.3.0"; sha256="0gi383392rs7snb2l9760vkws5hqfikyaj3i7cyby9g1sc2s6yx8"; depends=[]; }; hommel = derive2 { name="hommel"; version="1.1"; sha256="1vrfw3zxj6hlfr5czrhmx67bjbd94whfgdmsdzlmdpmj0w5r0naz"; depends=[Rcpp]; }; + homologene = derive2 { name="homologene"; version="1.1.68"; sha256="0i2ywr3rxryakp7qskgjc0pll9nskwngk5m2d2jikxxq2biqf5zj"; depends=[dplyr magrittr]; }; homomorpheR = derive2 { name="homomorpheR"; version="0.2-1"; sha256="0qs4yimyfqx6rpxgh6h4z7vyb3qdxljnyvw1g8pxm4y75i0v6vz5"; depends=[gmp R6 sodium]; }; homtest = derive2 { name="homtest"; version="1.0-5"; sha256="1lnqlg3dwq174ic6dbjllysw5fjy5kvvgbl6gvabjmcs66z27fp0"; depends=[]; }; hopbyhop = derive2 { name="hopbyhop"; version="2.1"; sha256="0j4m1zz0ijf1kw2m12g7bww3418b8pyjvvrzkm8xcryjil2xfmim"; depends=[]; }; horizon = derive2 { name="horizon"; version="1.0"; sha256="1wrp5qr1qql21xwcjh415q67z2ym4790zfp0n81360v6bp2b3hyy"; depends=[raster]; }; hornpa = derive2 { name="hornpa"; version="1.0"; sha256="0pfvk2jkrwgvshgq9g55qijgpjh0677rpbya0r8759n92v3axbp4"; depends=[]; }; - horserule = derive2 { name="horserule"; version="0.1.0"; sha256="1kswmzdb58fkwhm9l3v8qhkw0wkprhprkxhxzsc7c3znvcim6jni"; depends=[BayesLogit gbm ggplot2 inTrees MASS mvnfast randomForest RColorBrewer]; }; horseshoe = derive2 { name="horseshoe"; version="0.1.0"; sha256="19khsr7gfcygqasjswvm0v0ddna1i1grfbhars8jlvybfawswhgx"; depends=[]; }; hot_deck = derive2 { name="hot.deck"; version="1.1"; sha256="13pfgcyqaf5ik3pi8vgm06xmqli4hgslzlmhy1zi951anzdr49bd"; depends=[mice]; }; hotspot = derive2 { name="hotspot"; version="1.0"; sha256="0a4w5d6rg324hd06lfwr1hxf6bwr10n55s3ynz5bpkh9c61yik3n"; depends=[]; }; @@ -6956,40 +7105,39 @@ in with self; { hqmisc = derive2 { name="hqmisc"; version="0.1-1"; sha256="0jcy2hb3dmzf9j4n92aq7247mx9w7n30wpsx0dkchqnjwlqwwncw"; depends=[]; }; hqreg = derive2 { name="hqreg"; version="1.4"; sha256="1j6zp3rmpjx409vm7kq159mlawg87wsq0ypdkan34yxxv9py2jmi"; depends=[]; }; hrbrthemes = derive2 { name="hrbrthemes"; version="0.1.0"; sha256="1hf4370hj80m6zr20236p9068g6ky0366gfk5l9hnj6l8jpmy9qa"; depends=[extrafont ggplot2 hunspell purrr scales stringi]; }; - hrr = derive2 { name="hrr"; version="1.1.1"; sha256="17jzsgh2784y7jdwpa50v7qz99dw6k2n25sisnam6h1a39b96byn"; depends=[]; }; - hsdar = derive2 { name="hsdar"; version="0.6.0"; sha256="03nz73yl662z01hj8yz6ss6hnps08wk21xvw2na4mksv8j03gqhz"; depends=[caret raster rgdal rootSolve signal]; }; + hsdar = derive2 { name="hsdar"; version="0.7.0"; sha256="09yx8zc9qbf2kj8k76z9a6rhh5zy4ggsxvwhx35666phdml42dy0"; depends=[caret raster rgdal signal]; }; hsicCCA = derive2 { name="hsicCCA"; version="1.0"; sha256="1d4lkjrihwhl3jrsj7250ccd90nfwpllyavc3mp15fhcy2jnjci8"; depends=[]; }; hsm = derive2 { name="hsm"; version="0.1"; sha256="1dacsq2f23bz94rh4s3477hs38pbrpz2lis4s1l9im894bcbny1x"; depends=[]; }; hsmm = derive2 { name="hsmm"; version="0.4"; sha256="1fh8c5kfv4brygdq6bfkrhrhkm99mxl4ljb1mhp9nf2bjlla11mc"; depends=[mvtnorm]; }; hsphase = derive2 { name="hsphase"; version="2.0.1"; sha256="1z7yxbknldxn780dxw9xz984b3i8pj5hmdnbynvxc5k0ss8g7isy"; depends=[Rcpp RcppArmadillo snowfall]; }; htdp = derive2 { name="htdp"; version="0.1.4"; sha256="0w579qp0p544xryb5r08m1nhqf7rmgv9q0lyx6my4av62l70ka5w"; depends=[Rcpp]; }; htm2txt = derive2 { name="htm2txt"; version="2.1.1"; sha256="09q026yy8qm1fb3a4bf9vsp4j09kayl7xmk0p58ikar5l3bmfdjv"; depends=[]; }; - htmlTable = derive2 { name="htmlTable"; version="1.9"; sha256="0ciic1f4iczq14j81fg7kxibn65sy8z1zxkvk1yxnxxg6dzplj2v"; depends=[checkmate htmlwidgets knitr magrittr stringr]; }; + htmlTable = derive2 { name="htmlTable"; version="1.11.2"; sha256="1lbpi0kkk8b41w10scmlf27dg5azcv51a4q3p5bpqyphrnqp78k4"; depends=[checkmate htmltools htmlwidgets knitr magrittr rstudioapi stringr]; }; htmltab = derive2 { name="htmltab"; version="0.7.1"; sha256="0lymagm7z6zn0ddygqxi831ikk74112lkqkbvs5j1djhmr359ajc"; depends=[httr XML]; }; htmltidy = derive2 { name="htmltidy"; version="0.4.0"; sha256="090rj1fzdsa8m4g33d4mx92dm8afh173i4hqa4zym8c909jwh9qn"; depends=[htmltools htmlwidgets Rcpp XML xml2]; }; htmltools = derive2 { name="htmltools"; version="0.3.6"; sha256="18k8r1s8sz1jy7dkz35n69wj20xhmllr53xmwb4pdzf2z61gpbs4"; depends=[digest Rcpp]; }; - htmlwidgets = derive2 { name="htmlwidgets"; version="0.9"; sha256="0plqkfqys1ca3ki7sb7yc6gwjpi7yy4g3mzh7hfy8s6qri0vam0i"; depends=[htmltools jsonlite yaml]; }; + htmlwidgets = derive2 { name="htmlwidgets"; version="1.0"; sha256="09lkmzh35l1420sg0dyh4vgyishqx3g8xmgs2y9z7lbi09xgwwwr"; depends=[htmltools jsonlite yaml]; }; htree = derive2 { name="htree"; version="0.1.1"; sha256="1ns7yzzxapax5f355bpq81i581l1iwrfixp1k69n8mzsy106i988"; depends=[]; }; hts = derive2 { name="hts"; version="5.1.4"; sha256="0n1gna2694yih5kaiw59crdlfcdfm9dqhjpkcwaskgrpmh08wnkd"; depends=[forecast Matrix matrixcalc Rcpp RcppEigen SparseM]; }; - httk = derive2 { name="httk"; version="1.7"; sha256="1l29wpb03l7lk7y4lzjpxksr96jymg4sdvh7amd6068kdch0lqqp"; depends=[data_table deSolve msm mvtnorm survey truncnorm]; }; + httk = derive2 { name="httk"; version="1.8"; sha256="1snwqqvacxgl4cyadx5la87xh4kxiqpdmyq4szqz5r1aq2sxrr03"; depends=[data_table deSolve msm mvtnorm survey truncnorm]; }; httpRequest = derive2 { name="httpRequest"; version="0.0.10"; sha256="0f6mksy38p9nklsr44ki7a79df1f28jwn2jfyb6f9kbjzh98746j"; depends=[]; }; httpcache = derive2 { name="httpcache"; version="1.1.0"; sha256="11hdc1jj2jbgvsps1h55azq0cr2fl556k631ns9k0747sjfmy2k9"; depends=[digest httr]; }; httpcode = derive2 { name="httpcode"; version="0.2.0"; sha256="06k853ihwzkcx4z3jzazpb03p91frqkwz18jy4fwr8j2nwyqbhgv"; depends=[]; }; - httping = derive2 { name="httping"; version="0.1.0"; sha256="1bhy5mh0hz83rjmvh7wl211nqkz58gxsgkwlkmjrdfzc2cparxjz"; depends=[httpcode httr jsonlite magrittr pryr]; }; - httptest = derive2 { name="httptest"; version="2.3.4"; sha256="1r5pc6617k6jcgdrqxhm377arg6qbijps3p5ixa9vjma9iqiplar"; depends=[digest httr jsonlite testthat]; }; + httping = derive2 { name="httping"; version="0.2.0"; sha256="0hdcf51yak8yagy4xj9cyck934lgmvpkd08jvlql33ir5mqvvv3i"; depends=[httpcode httr jsonlite magrittr pryr]; }; + httptest = derive2 { name="httptest"; version="3.0.0"; sha256="1k75i84ajka0abc8x51w74dldb0z9i08dlqbkcdby25465k01l8r"; depends=[digest httr jsonlite testthat]; }; httpuv = derive2 { name="httpuv"; version="1.3.5"; sha256="1sg4f223zfyd265b28rlhsn3b6mqflcpnmya98cjmjncmy9vjdj3"; depends=[Rcpp]; }; httr = derive2 { name="httr"; version="1.3.1"; sha256="0n7jz2digbgv48rbr9vmzv4vmf4rahl9jjy31izs7sxj4rs4s4r2"; depends=[curl jsonlite mime openssl R6]; }; hues = derive2 { name="hues"; version="0.1"; sha256="0b6y4ld242fqzx4ccxzk4i4zbx7myk7v3a03r0klgbh2mmw3ixm0"; depends=[colorspace]; }; huge = derive2 { name="huge"; version="1.2.7"; sha256="134d951x42vy9dcmf155fbvik2934nh6qm2w5jlx3x2c6cf7faq4"; depends=[igraph lattice MASS Matrix]; }; humanFormat = derive2 { name="humanFormat"; version="1.0"; sha256="0zwjbl8s5dx5d57sfmq6myc6snximc56zl88h8y1s1jqphyn9sir"; depends=[testthat]; }; humaniformat = derive2 { name="humaniformat"; version="0.6.0"; sha256="0vaynjzz57pk4y1liag9lpn9jkag2033a6bkn28zzm7ndg3344l6"; depends=[Rcpp]; }; - humarray = derive2 { name="humarray"; version="1.2"; sha256="16vy949dxrxjmgpsnn1mf1hcm1dn1a3507npxmsafp2yp65qxqhg"; depends=[BiocGenerics BiocInstaller biomaRt GenomeInfoDb GenomicFeatures GenomicRanges genoset IRanges NCmisc Rcpp reader rtracklayer S4Vectors]; }; + humanleague = derive2 { name="humanleague"; version="2.0.2"; sha256="1svsqfqisywf0iqf3mrh4xnssvjmml6wn7l8iq5shvpmw71l4nnl"; depends=[curl Rcpp]; }; humidity = derive2 { name="humidity"; version="0.1.1"; sha256="0ifxjz7216ld5c4kc9vs83fcijbg5i2z0mwfzszch9j1s734yc8y"; depends=[]; }; - hunspell = derive2 { name="hunspell"; version="2.7"; sha256="16ma0xpgp06hwrbdcznb0nx4ab8c3mf802bnq13jf4l8vmb2lpif"; depends=[digest Rcpp]; }; + hunspell = derive2 { name="hunspell"; version="2.9"; sha256="10186544s6nyd2ba470idxrxsl788dkmr1g1ri8x2n1lky9zmrik"; depends=[digest Rcpp]; }; hurdlr = derive2 { name="hurdlr"; version="0.1"; sha256="1ryrqsxa07isxv2zx156bcn36d4yjvwpirb8jqcmqm97q7rmihmq"; depends=[]; }; hurricaneexposure = derive2 { name="hurricaneexposure"; version="0.0.1"; sha256="1j6srqnmdhmg1yg06nqxapdrd9p3yrfs01z0sk43dvjq4dmwmrjr"; depends=[data_table dplyr ggmap ggplot2 lazyeval lubridate maps purrr RColorBrewer stringr tidyr]; }; - hutils = derive2 { name="hutils"; version="0.9.0"; sha256="0251mwr35hlr6xsz9vm4cmq31ngmkn086f5ib6as9d0q8bgamfkg"; depends=[data_table fastmatch magrittr]; }; - huxtable = derive2 { name="huxtable"; version="1.1.0"; sha256="1k0l2zzcm7b4vh4xi0z8gsj699byr7jzzfa5cbsm51mgqb8mkkqq"; depends=[dplyr glue htmltools knitr lazyeval rmarkdown tibble]; }; + hutils = derive2 { name="hutils"; version="0.10.0"; sha256="0wic5s6k0pqsv41kpjwz6a48kh3ha0xw5y9zfa3zj4y7w8l2w94d"; depends=[data_table fastmatch magrittr]; }; + huxtable = derive2 { name="huxtable"; version="2.0.2"; sha256="1qj83gcfg204gqjsd1vh32wd4p5jhfyf764vhapii6iswrddzv4d"; depends=[assertthat dplyr glue htmltools knitr lazyeval rmarkdown stringr tibble]; }; hwde = derive2 { name="hwde"; version="0.67"; sha256="0wb2f9i5qi7w77ygh8bvydfpr7j5x8dyvnnhdkajaz0wdcpkyaqy"; depends=[]; }; hwriter = derive2 { name="hwriter"; version="1.3.2"; sha256="0arjsz854rfkfqhgvpqbm9lfni97dcjs66isdsfvwfd2wz932dbb"; depends=[]; }; hwwntest = derive2 { name="hwwntest"; version="1.3"; sha256="1b5wfbiwc542vlmn0l2aka75ss1673z8bcszfrlibg9wwqjxlwk5"; depends=[polynom wavethresh]; }; @@ -7001,14 +7149,16 @@ in with self; { hydroPSO = derive2 { name="hydroPSO"; version="0.3-4"; sha256="12md94g78m7m1np36sadx0wxpb149pn5gd8yj2kw7fphb8g6a218"; depends=[Hmisc lattice lhs sp zoo]; }; hydroTSM = derive2 { name="hydroTSM"; version="0.5-1"; sha256="053id9ldr10mafww3vas9fiy16lz0n1mqqfg6wjsbm5r15jkz3ha"; depends=[automap e1071 gstat lattice maptools sp xts zoo]; }; hydrogeo = derive2 { name="hydrogeo"; version="0.6-1"; sha256="16m6yvr9yhvb0vdh9pqd6gzf3h9km7gd89y6risjddv6g83469k8"; depends=[]; }; - hydrolinks = derive2 { name="hydrolinks"; version="0.5"; sha256="1pc8jg14pf4mz93njnfd6x18k74w4s78xh63vwnnrf629njvwbfh"; depends=[dplyr httr rappdirs RSQLite sf sp units]; }; + hydrolinks = derive2 { name="hydrolinks"; version="0.7.1"; sha256="1yghqn5wvwx2s1lqjh8pi051hki5f9glhaqnrnjlx4bbsirf3hv7"; depends=[dbplyr dplyr httr rappdirs RSQLite sf units]; }; + hydroscoper = derive2 { name="hydroscoper"; version="0.1.0"; sha256="06w3rzdv0cjyk5pfx6ji1hkjf23pfd2z0aigyynj7ajbqfxmibna"; depends=[readr stringi stringr XML]; }; hydrostats = derive2 { name="hydrostats"; version="0.2.5"; sha256="1n0wy8i1cfsgmqh898qi0qnqn4qx1srjvd05vmsf9qmhpnnyqw5m"; depends=[]; }; hyfo = derive2 { name="hyfo"; version="1.3.9"; sha256="03f3irmhndwfnv4i121gwxb2yv1868pggzyr80pgp4969qzddacm"; depends=[data_table ggplot2 lmom maps maptools MASS moments ncdf4 plyr reshape2 rgdal rgeos zoo]; }; hyper_fit = derive2 { name="hyper.fit"; version="1.0.3"; sha256="17f5i2i960796hl92y7ci9ffspway435r02kw1zk91lvfn927hng"; depends=[LaplacesDemon magicaxis MASS rgl]; }; hyper2 = derive2 { name="hyper2"; version="1.0-1"; sha256="107cp6na0srqax42fmvcsrviy631hg6phqmkc0cxz1zdxxxw6442"; depends=[partitions Rcpp]; }; - hyperSMURF = derive2 { name="hyperSMURF"; version="1.1.2"; sha256="1jlcfwyqs2mfdixqik5dqb0sl3i9pjxcrwabbcr24z8wnq524zx8"; depends=[doParallel foreach iterators randomForest unbalanced]; }; + hyperSMURF = derive2 { name="hyperSMURF"; version="1.1.3"; sha256="0ayhq7w23azwjing2l4spfydmx7g615g3c5fm6fw1an660mzsgd2"; depends=[doParallel foreach iterators randomForest unbalanced]; }; hyperSpec = derive2 { name="hyperSpec"; version="0.99-20171005"; sha256="0rhn9f4faxscwrip14ndymaddc5nfd6pyrhgwkwm8hf680wdrhbl"; depends=[ggplot2 lattice latticeExtra testthat]; }; - hypergea = derive2 { name="hypergea"; version="1.3.3"; sha256="0spchrbb5y3yx63acs9ns256h7k3nd5wxg8vw258kqlvyapj50l6"; depends=[]; }; + hypercube = derive2 { name="hypercube"; version="0.1.0"; sha256="0iv3cfs636mwijm2rjk427izf0gk5lh2fknd7bmb8pd188ckwqmf"; depends=[stringr]; }; + hypergea = derive2 { name="hypergea"; version="1.3.6"; sha256="1k1525bkkj83j2nn9ixidb8vjvdmc4l9jvfarzgg532gg7wn3841"; depends=[]; }; hypergeo = derive2 { name="hypergeo"; version="1.2-13"; sha256="13jdiy216znwhr91iqnh03mvkmyscw439syb3h4i67dd78sphnvd"; depends=[contfrac deSolve elliptic]; }; hypersampleplan = derive2 { name="hypersampleplan"; version="0.1.1"; sha256="1sk3s1jm46ac4i7p433s3kyngj86kq2821zzhp30a3y8vi1j2psq"; depends=[]; }; hypervolume = derive2 { name="hypervolume"; version="2.0.8"; sha256="003r5x9w5fvx2z8ysadx0bihz521ndizi14x8z69hvg5g74xwz84"; depends=[data_table e1071 fastcluster geometry hitandrun ks maps MASS mvtnorm pdist progress raster Rcpp RcppArmadillo rgeos rgl sp]; }; @@ -7016,11 +7166,10 @@ in with self; { hypoparsr = derive2 { name="hypoparsr"; version="0.1.0"; sha256="1bldiz5j6h9z499wwz8cbg5vshdmxgcd8qfxkz1a45q8b6nsd4vf"; depends=[data_tree readr RecordLinkage tibble]; }; hypothesestest = derive2 { name="hypothesestest"; version="1.0"; sha256="0g8sm386m1zm9i3900r62x83wb600cy8hqk7dlvbx6wcgrxg82sm"; depends=[]; }; hypothesisr = derive2 { name="hypothesisr"; version="0.1.1"; sha256="0z06risagphhvqiw4lrxy52q6q2yr10w2yxsm8iz1wh9ik097pcv"; depends=[dplyr httr jsonlite]; }; - hysteresis = derive2 { name="hysteresis"; version="2.5"; sha256="1b1dd2367pjbg4jnn65l2jcj38ljz7adpdg8f5b9rj1rw7qgikfl"; depends=[car MASS msm]; }; + hysteresis = derive2 { name="hysteresis"; version="2.6"; sha256="00v19m52bg2i3zg8p7yj56axzj9sm64qr61226p5h7sn0zrpws3b"; depends=[car MASS msm]; }; hzar = derive2 { name="hzar"; version="0.2-5"; sha256="000l4ki3hvznnhkxc5j422h5ifnsfqalv666j48yby1hsf1lc3kg"; depends=[coda foreach MCMCpack]; }; iBATCGH = derive2 { name="iBATCGH"; version="1.3"; sha256="0pnkkabzi57czcwd9i15nwv8ggwvyxmvn1wam7yrrrbvmi17lmrm"; depends=[msm Rcpp RcppArmadillo]; }; iBST = derive2 { name="iBST"; version="1.0"; sha256="02p7lcr1wrf21v4568jc8hmjcijy3fnbv77s8nlhv2s4p0pgzh5x"; depends=[Rcpp rpart survival]; }; - iBUGS = derive2 { name="iBUGS"; version="0.1.4"; sha256="0vsxy8pnbix0rg7ksgywx7kypqb5ngkxhldh3cisjkvdv638ybps"; depends=[gWidgetsRGtk2 R2WinBUGS]; }; iC10 = derive2 { name="iC10"; version="1.1.3"; sha256="19dlrwj47zmdgmvzjfs5qa9fqq8g9ywhgy5mqbp99n7d9hg4ybxh"; depends=[iC10TrainingData pamr]; }; iC10TrainingData = derive2 { name="iC10TrainingData"; version="1.0.1"; sha256="1x1kgxiib9l7whm2kmbv1s912hgpl7rdpqpn67nlkiswnr27hqn4"; depends=[]; }; iClick = derive2 { name="iClick"; version="1.3"; sha256="052pjfxj11ay1yki89hdbbj550snppicmh8z85wlgf70amxhyq5k"; depends=[boot car coefplot fBasics forecast lattice lmtest lubridate openair papeR rugarch sandwich timeDate timeSeries]; }; @@ -7033,9 +7182,8 @@ in with self; { iGSEA = derive2 { name="iGSEA"; version="1.2"; sha256="1xlz8mbxqnrwyqj7jwma7vmvjlaccajbfxf3hi4wp5qs2pch8806"; depends=[]; }; iGasso = derive2 { name="iGasso"; version="1.4"; sha256="17xxqncl5xcphdqclghcazygcgibf8ijdf4kkl3ga11xf70sahj2"; depends=[CompQuadForm lattice]; }; iJRF = derive2 { name="iJRF"; version="1.1-4"; sha256="1fgbc0z647vwybffzp4iips86pxakd25dlk5jqgm049s6pa8m73v"; depends=[ggplot2]; }; - iLaplace = derive2 { name="iLaplace"; version="1.1.0"; sha256="1z752yw3nvqj1ckf23262phkw849cb5p4m14v108xf2dizyzggxg"; depends=[doParallel fastGHQuad foreach iterators Rcpp RcppArmadillo]; }; + iMRMC = derive2 { name="iMRMC"; version="1.1.0"; sha256="04wpqdds5vfqvl8n5g64vnyh4a40dxjh8l1bgw1vdz1372n0421g"; depends=[]; }; iMediate = derive2 { name="iMediate"; version="0.4"; sha256="0pwvzd0k9m2jd7sizl436vs63rg9yinisrb0flz34yj5avn6rmb0"; depends=[mediation mvtnorm plotly]; }; - iMessager = derive2 { name="iMessager"; version="1.0"; sha256="1w0l2qpcgglg13bnqdnz8xnfq2mxkk5g6cblvf2v5y03c2gpmm86"; depends=[]; }; iNEXT = derive2 { name="iNEXT"; version="2.0.12"; sha256="1041r5k0k3kzik5vwyd62s4yc85lnnxbg5gbbl0kl629kikymb6y"; depends=[ggplot2 reshape2]; }; iNOTE = derive2 { name="iNOTE"; version="1.0"; sha256="1969xmgfv9405r09zpd2icvjd9vvzw4dx5qaqxk1a0jvbvhp3h88"; depends=[CompQuadForm mixtools plyr]; }; iNextPD = derive2 { name="iNextPD"; version="0.3.2"; sha256="06wka2qr1jm3hvi8j0b19fr21v72gmqknz8dg0l5wl91m0prqns3"; depends=[ade4 ggplot2 iNEXT Rcpp]; }; @@ -7056,7 +7204,7 @@ in with self; { ibmcraftr = derive2 { name="ibmcraftr"; version="1.0.0"; sha256="0zm5j0a1wjj5agibp38h73qxpq0njvrhfq3077xhhfizcb3v24sb"; depends=[Rcpp]; }; ibmdbR = derive2 { name="ibmdbR"; version="1.49.0"; sha256="1rr64gwdy65njy0a52y3vncp7hlkp0mmq5ik92xbs49f4vagz58a"; depends=[arules ggplot2 MASS Matrix RODBC rpart rpart_plot]; }; ibr = derive2 { name="ibr"; version="2.0-3"; sha256="1plyz4sl0i8qhk9dh3h7zvh9h8wqr589jvasmvp7r3slp4ndhp1r"; depends=[mgcv]; }; - ic_infer = derive2 { name="ic.infer"; version="1.1-5"; sha256="0nmx7ijczzvrv1j4321g5g5nawzll8srf302grc39npvv1q17jyz"; depends=[boot kappalab mvtnorm quadprog]; }; + ic_infer = derive2 { name="ic.infer"; version="1.1-6"; sha256="14vcwx5592br4zky9mq82akwk8pfiz7p1rx2jvyb48prrs2mm9gy"; depends=[boot kappalab mvtnorm quadprog]; }; ic50 = derive2 { name="ic50"; version="1.4.2"; sha256="1a5ddmbdfr3ls132fvalbkh4yaawv9k58rgpy54s5qddrm6aas2s"; depends=[]; }; icRSF = derive2 { name="icRSF"; version="1.1"; sha256="0yrlwf6p3k0i9vjm4zmf585cfv39ihchkyz9jfi4lzdh15msrzlx"; depends=[icensmis Rcpp]; }; ica = derive2 { name="ica"; version="1.0-1"; sha256="1bkl4a72l0k6gm82l3jxnib898z20cw17zg81jj39l9dn65rlmcq"; depends=[]; }; @@ -7066,24 +7214,25 @@ in with self; { icarus = derive2 { name="icarus"; version="0.3.0"; sha256="1656bz0av59dpgndibn0bc5zr9zka9pmw7qmhjz2b956bh7sh4ag"; depends=[]; }; iccbeta = derive2 { name="iccbeta"; version="1.1.0"; sha256="1xw0mz3ipkfz1jsjzwjnrm0af1gs31js7nvgy79cxqz31955zjww"; depends=[Rcpp RcppArmadillo]; }; icd = derive2 { name="icd"; version="2.3.1"; sha256="15clnf5zbbqj4z5dgmx2wkn8jqmd8msryc555hk339d1662j41zd"; depends=[checkmate magrittr Rcpp testthat]; }; - icd9 = derive2 { name="icd9"; version="1.3.1"; sha256="0yrgg1vf9jf0kv4qbvc0d8n26csxx79g2196ijgq43rhprrrm1y6"; depends=[checkmate fastmatch Rcpp]; }; icdGLM = derive2 { name="icdGLM"; version="1.0.0"; sha256="1mh9kwn21n19v4lrmj33ghpna7dl66fx19gi6lcjanmrpzrkwdnz"; depends=[Matrix]; }; - icenReg = derive2 { name="icenReg"; version="2.0.6"; sha256="0idkqknrv02kd8cmd2cdl24ykwc6bvh3c2fkd0v2sak2581qzyxq"; depends=[coda foreach MLEcens Rcpp RcppEigen survival]; }; + icenReg = derive2 { name="icenReg"; version="2.0.7"; sha256="1fc6l3mqnm4rcg49bk2plfa011g7nay71gzd4nxnjisifmw6qi2s"; depends=[coda foreach MLEcens Rcpp RcppEigen survival]; }; icensBKL = derive2 { name="icensBKL"; version="1.1"; sha256="12zx5x81jy48mp0l6a5ga0ikkjxvndv5cv2xf6d2lczfk7fz9lbp"; depends=[gtools Icens MASS mvtnorm smoothSurv survival TeachingDemos]; }; icensmis = derive2 { name="icensmis"; version="1.3.1"; sha256="1c0j43wffb5h99chlj8j45lpan7dpn2i0r4rr6b2kq16p1zabfjw"; depends=[Rcpp]; }; - icesAdvice = derive2 { name="icesAdvice"; version="1.3-1"; sha256="1afkb5f48f03l9hcjv7xgm6nindk4gn6f38k51pf31a7rxg0114x"; depends=[]; }; + icesAdvice = derive2 { name="icesAdvice"; version="1.4-0"; sha256="0ra25g6am75qh32rfjps59x31zwav98k5d4nf6gbam98cr7vr5h3"; depends=[]; }; icesDatras = derive2 { name="icesDatras"; version="1.2-0"; sha256="0arkn9ma03qb21sv5chmz5fj65da5ivqhvrg8bqibbky8zkix1vh"; depends=[]; }; icesSAG = derive2 { name="icesSAG"; version="1.3-2"; sha256="1w3v10qjs9jyn7dp6vsv8hyax8mn2b8y5afba4lcpzh0p8d2yzpm"; depends=[httr icesVocab openssl png xml2]; }; - icesTAF = derive2 { name="icesTAF"; version="1.4-0"; sha256="14rrs8b4vmf2dk64y2y5mpfdpwn66aj17rpyq9122pcdfk3sf649"; depends=[httr]; }; + icesTAF = derive2 { name="icesTAF"; version="1.5-0"; sha256="19xg24k4fz64ki8mxf9g0r49syqh97a98dfb9zgiga3da3f2rk4w"; depends=[httr]; }; icesVocab = derive2 { name="icesVocab"; version="1.1-2"; sha256="15ha2visv44pphkahg766afafh6467lwznvppwkvqjrbfiijkc6l"; depends=[XML]; }; icmm = derive2 { name="icmm"; version="1.1"; sha256="1w9f1rniz67rrvq0akc64s5433ddmr2cgbcljil4c58yyz8hinx8"; depends=[EbayesThresh]; }; icosa = derive2 { name="icosa"; version="0.9.81"; sha256="05gpiksncdi536f4py7szfi6myny1gqj8i0hsgpma7cfcm3npn0l"; depends=[igraph raster Rcpp rgdal rgl sp]; }; icpsrdata = derive2 { name="icpsrdata"; version="0.3.0"; sha256="17sprbbi8fmvcp8d7hwrxl5amg0j036wq483cw62zbmni3p3fl82"; depends=[httr purrr rvest]; }; + icr = derive2 { name="icr"; version="0.5.2"; sha256="1qmr6sc56v7ywy01f2mdhdxv2yp6rnwhbq347lfhb4ikhax3znpy"; depends=[ggplot2 Rcpp reshape2]; }; icsw = derive2 { name="icsw"; version="0.9"; sha256="0lmq9l9sy0fz3yjj2sj8f19iy26913caibf7d9zb9w9n6cqskvlx"; depends=[]; }; idar = derive2 { name="idar"; version="1.0"; sha256="1yfv3na4rcldkpzybf7la227z4ynsl1scrziirl5gp072k7zrs01"; depends=[ape FD picante spatstat]; }; idbg = derive2 { name="idbg"; version="1.0"; sha256="1rxmj04hswxybrg7dfib3mjy8v8mdiv13zwbscp2q55z55hhf1m5"; depends=[]; }; idbr = derive2 { name="idbr"; version="0.2"; sha256="1hhwn93arkzqs5ns9ll7rwqq5gyngixbicly9asw0dgjn12n5p7x"; depends=[countrycode dplyr httr jsonlite]; }; - idefix = derive2 { name="idefix"; version="0.1.2"; sha256="00whk6w8mfh8z7l4lhb7c26yniq9a59ja1qfiy6dsxfdcbwdbcnd"; depends=[dplyr gtools MASS maxLik Rdpack scales]; }; + idealstan = derive2 { name="idealstan"; version="0.2.7"; sha256="1818vwlv5cr6qyg7p6kgyb996n89d2xr4cy6ys9pdhrp7lip9prr"; depends=[bayesplot BH dplyr ggplot2 lazyeval Rcpp RcppEigen rlang rstan rstantools shinystan StanHeaders stringr tidyr]; }; + idefix = derive2 { name="idefix"; version="0.2.4"; sha256="0j64pmccg01lscvjg9z97ypv3svl4jbvs4819jn4kc9ni6gq4fai"; depends=[dplyr gtools MASS maxLik Rdpack scales shiny]; }; idem = derive2 { name="idem"; version="3.0"; sha256="15k6gk3v2hijdfabc1c2xabm5v84hgs0p9lpddrpir3h5jzilr3i"; depends=[BH Rcpp RcppEigen rstan sqldf StanHeaders survival]; }; idendr0 = derive2 { name="idendr0"; version="1.5.3"; sha256="11c12d166bp2i498d8y6ipg5jhz1xsdsrmnhjqnrqqzp9avvrsjp"; depends=[tkrplot]; }; identity = derive2 { name="identity"; version="0.2-1"; sha256="1j5wb5cj5j49in2g6r1shdm4ri4cfzj22hpqazvcmq4dm291sdi9"; depends=[]; }; @@ -7107,21 +7256,22 @@ in with self; { igraphdata = derive2 { name="igraphdata"; version="1.0.1"; sha256="19w5npa4b8c054v94xlr7nmhhg2fhq4m8jbds86skp8zvipl4rkl"; depends=[]; }; igraphinshiny = derive2 { name="igraphinshiny"; version="0.1"; sha256="1ww5s4jfihzcx4k35lbhzsf54z720xh7b2p5alzk843m6rx77986"; depends=[igraph shiny]; }; igraphtosonia = derive2 { name="igraphtosonia"; version="1.0"; sha256="0vy9jnpjp68l8s0hi1l57j9p41c543h3iqv16pwl550f38zqp8j6"; depends=[igraph]; }; - iheatmapr = derive2 { name="iheatmapr"; version="0.4.2"; sha256="09zmmq157848wa5j055nwl0yvk81y7iv1ph6y379ssp56d8d85ff"; depends=[fastcluster ggdendro htmlwidgets jsonlite knitr magrittr plyr RColorBrewer S4Vectors scales]; }; + iheatmapr = derive2 { name="iheatmapr"; version="0.4.3"; sha256="0124d7h8n83zb5kvvavccprlqknpqrd634zv7sz9s915xzhp7jgz"; depends=[fastcluster ggdendro htmlwidgets jsonlite knitr magrittr plyr RColorBrewer S4Vectors scales]; }; ihs = derive2 { name="ihs"; version="1.0"; sha256="1c5c9l6kdalympb19nlgz1r9zq17575ivp3zrayb9p6w3fn2i06h"; depends=[maxLik]; }; + ijtiff = derive2 { name="ijtiff"; version="0.3.0"; sha256="1c5pamxjmipgmqipnf0gg4yx7i0hjrb80c0mb2sjab4v05finz55"; depends=[checkmate fields filesstrings magrittr purrr Rcpp readr RSAGA stringr]; }; iki_dataclim = derive2 { name="iki.dataclim"; version="1.0"; sha256="1yhvgr8d3j2r8y9c02rzcg80bz4cx58kzybm4rch78m0207wqs7p"; depends=[climdex_pcic lubridate PCICt zoo]; }; ilc = derive2 { name="ilc"; version="1.0"; sha256="0hs0nxv7cd300mfxscgvcjag9f2igispcskfknb7sn7p8qvwr5ki"; depends=[date demography forecast rainbow survival]; }; imPois = derive2 { name="imPois"; version="0.1.4"; sha256="07350zly4fyx2sf9cqpfpyy8l5kn96z49kzym81p2bmhq66d408h"; depends=[geometry rgl]; }; - imageData = derive2 { name="imageData"; version="0.1-26"; sha256="0r39bp33kki2ddvds2jkpk1r6afl8d1xbl447lnz25dxpzfcajn2"; depends=[dae GGally ggplot2 Hmisc RColorBrewer reshape XLConnect]; }; + imageData = derive2 { name="imageData"; version="0.1-41"; sha256="1rkkg9zzhkamql5y47kx9s8p7fnffgm7hgsdv85brj45gc441sfm"; depends=[dae GGally ggplot2 Hmisc RColorBrewer reshape XLConnect]; }; imager = derive2 { name="imager"; version="0.40.2"; sha256="17awk431r37259c0yqs6c31kyiwhm9j80g2hw9hkk21jbi4jbghj"; depends=[Cairo downloader jpeg magrittr plyr png purrr Rcpp readbitmap stringr]; }; imaginator = derive2 { name="imaginator"; version="0.1.1"; sha256="1xp5wsv570f1qy2fn99d8ijydmlapb6h6kinj07pilvv215dg93w"; depends=[assertthat dplyr lubridate magrittr stringi]; }; imagine = derive2 { name="imagine"; version="1.3.1"; sha256="0sgzsyqqfi7rcs2xqxdc6f9kji09wsa38lxv7k2vymy3kdy8p9f6"; depends=[Rcpp]; }; - imbalance = derive2 { name="imbalance"; version="0.1.1"; sha256="0905ah55ajhkyimcfdv03x0159330rrxb5m327g8w4wrxq3mj1p3"; depends=[bnlearn ggplot2 KernelKnn mvtnorm Rcpp RcppArmadillo]; }; + imbalance = derive2 { name="imbalance"; version="1.0.0"; sha256="1pfhwf4844m0a8qsm852am63x18vlkbs6m1s9izrpd219616skpr"; depends=[bnlearn C50 FNN ggplot2 KernelKnn mvtnorm Rcpp RcppArmadillo smotefamily]; }; imfr = derive2 { name="imfr"; version="0.1.5"; sha256="1f4zynra79h42dmd9qhg67wwvs7c640f5is98bq30fdphiybihgz"; depends=[dplyr httr jsonlite]; }; imguR = derive2 { name="imguR"; version="1.0.3"; sha256="14f7ghgc8rbrpqb21rinfbrj1wh80i6ii0awwi814152v5qzj4b3"; depends=[httr jpeg png]; }; immer = derive2 { name="immer"; version="0.8-5"; sha256="181mp407vy2ij35ggr1vi80y8ak6vyjplyvps1fdpxnanp1mqpw3"; depends=[CDM coda psychotools Rcpp RcppArmadillo sirt]; }; - imp4p = derive2 { name="imp4p"; version="0.4"; sha256="1g5q6y8xxk9176172yvryfg6y33jnhvqicps8p7kljwq8k099dxn"; depends=[imputeLCMD Iso Rcpp truncnorm]; }; - implyr = derive2 { name="implyr"; version="0.2.1"; sha256="0f9raar2amkbgk7hr7zdzwls3nlkrml73vdzjz2ycmfi521gsp9y"; depends=[assertthat DBI dbplyr dplyr rlang]; }; + imp4p = derive2 { name="imp4p"; version="0.5"; sha256="0s1vq64qspni5fqzz781a1l8ldfbwhb57h8z4dr5k9bama5s3g6l"; depends=[imputeLCMD Iso Rcpp truncnorm]; }; + implyr = derive2 { name="implyr"; version="0.2.2"; sha256="1kqz8pzgdbyvngsbab3v578jxm01hqmh2ipcqxsv1h9j628mvqj8"; depends=[assertthat DBI dbplyr dplyr rlang]; }; r_import = derive2 { name="r_import"; version="1.1.0"; sha256="0blf9539rbfwcmw8zsb4k58slb4pdnc075v34vmyjw752fznhcji"; depends=[]; }; importar = derive2 { name="importar"; version="0.1.1"; sha256="0xv445fmjhsbdlsq03k2rlycnggn3rcyq5a49zrg4jvjamzr0rgr"; depends=[]; }; imprProbEst = derive2 { name="imprProbEst"; version="1.0.1"; sha256="09y8yd9sw0b79ca45ryi7p82vy5s8cx0gg603rlc39lgwcdv45i3"; depends=[inline lpSolve]; }; @@ -7139,24 +7289,25 @@ in with self; { inaparc = derive2 { name="inaparc"; version="0.2.0"; sha256="0rgbnvvqzbx4j40qz32l1bxmg3wwzbl6719wb9m3xpakblvhhxs2"; depends=[kpeaks lhs]; }; inarmix = derive2 { name="inarmix"; version="0.4"; sha256="11a1vaxq22d5lab07jp5pw0znkaqj6bmkn6vsx62y6m4mmqk04yr"; depends=[Matrix Rcpp]; }; inbreedR = derive2 { name="inbreedR"; version="0.3.2"; sha256="09fr13ckyn2skiigkn4qdx5g080gcmyyrvzhcp0wrml9wpmy0h4z"; depends=[data_table]; }; - incR = derive2 { name="incR"; version="1.0.1"; sha256="13yx5a142am8hhj9qbg47fhdn07mhq57zn0awsmsfv8xz1g80hpx"; depends=[dplyr lubridate maptools rgeos]; }; - inca = derive2 { name="inca"; version="0.0.2"; sha256="1wj8f1ga0km9k9zrjcd7g228kw2pp6y6pgnfwmgdd05bx4hzjhdw"; depends=[Matrix Rcpp RcppArmadillo]; }; + incR = derive2 { name="incR"; version="1.0.2"; sha256="07v0jg3cw04qnblpr3zslfwxw8ng444f5545q4yznnbdw8wfmk8x"; depends=[dplyr lubridate maptools rgeos]; }; + inca = derive2 { name="inca"; version="0.0.3"; sha256="1g9js84xa5b6jl8gp4k0c55kjazfaw5g9biwk4v6vz3vwkwayyzh"; depends=[Matrix Rcpp RcppArmadillo]; }; incadata = derive2 { name="incadata"; version="0.6.1"; sha256="05i0zifdzc1w6p6annhzp9rdd4v82gx2sxi4lqpdnraaczdrhgbb"; depends=[backports decoder dplyr rccmisc rvest sweidnumbr xml2]; }; incgraph = derive2 { name="incgraph"; version="1.0.1"; sha256="0zjvxk2krdlm5bcr0m80nxy46f69a1xadfjw5sjw249b28wdclml"; depends=[BH dplyr orca purrr Rcpp testthat tibble]; }; incidence = derive2 { name="incidence"; version="1.2.1"; sha256="0fjbccsyrxjmc17kzqhh1ykx1ai6a8gmbxsjr42crm8bjpnq77iy"; depends=[ggplot2 ISOweek]; }; - inctools = derive2 { name="inctools"; version="1.0.10"; sha256="0ykkxlifh9gxflbk9786xbx2i5ja3pn01z9dj8dqwvrrq83npcfw"; depends=[cubature doParallel dplyr foreach ggplot2 glm2 magrittr MASS plyr pracma]; }; - indelmiss = derive2 { name="indelmiss"; version="1.0.7"; sha256="1pm1yl7kbxrik5ghvsvp6irmzgawxb8v03kvrqm48mnbghkdh1lv"; depends=[ape numDeriv phangorn Rcpp]; }; + inctools = derive2 { name="inctools"; version="1.0.11"; sha256="08a1aqsx1f1mkykpgbqbgvai60zxj9zwpmxynyajbm4lwr3rc6rp"; depends=[cubature doParallel dplyr foreach ggplot2 glm2 magrittr plyr pracma tmvtnorm]; }; + indelmiss = derive2 { name="indelmiss"; version="1.0.8"; sha256="0674hvgdq0fxab3h55iililphrr6lqp25359crvkqqgb8higbs0h"; depends=[ape numDeriv phangorn Rcpp]; }; indicspecies = derive2 { name="indicspecies"; version="1.7.6"; sha256="0a7s37k3bg4cnzkvn833nrwi6hnfa5f6jxa8ra954v4sp55g6i5d"; depends=[permute]; }; inegiR = derive2 { name="inegiR"; version="1.2.0"; sha256="14mpjyc85l9sznhn29cxk37l3y5yxclqiv2kgcwf8prpxfgwy83l"; depends=[jsonlite plyr XML zoo]; }; ineq = derive2 { name="ineq"; version="0.2-13"; sha256="09fsxyrh0j7mwmb5hkhmrzgcy7kf85jxkh7zlwpgqgcsyl1n91z0"; depends=[]; }; + infer = derive2 { name="infer"; version="0.1.1"; sha256="1ln2vw4d4xcy9g6cv594glrrcqwmjynv0mfq6nsl1h94gz8wnh8a"; depends=[assertive dplyr ggplot2 magrittr rlang tibble]; }; inference = derive2 { name="inference"; version="0.1.0"; sha256="0j92isfkbhk13yx2hd3a5dd7ikcbgjc04zisd1n5kmg6ajw2aj6r"; depends=[sandwich]; }; inferference = derive2 { name="inferference"; version="1.0.0"; sha256="1x6i8ycba9z57m1n143p1j9pmlfrhjhi4iw0fsny8xmcvqrlr85p"; depends=[Formula lme4 numDeriv]; }; - inferr = derive2 { name="inferr"; version="0.1.1"; sha256="148n1dwfjzzcahsqy9s3wlgpf9p6jpcn692j7dvyaw6rdk3bq1i3"; depends=[dplyr magrittr purrr Rcpp tibble tidyr]; }; + inferr = derive2 { name="inferr"; version="0.3.0"; sha256="1z5bfq0gv1h6iw8nwc19ar6f2sgsvgs3ghq52s09wclqk2yy4azz"; depends=[dplyr magrittr purrr Rcpp rlang shiny tibble tidyr]; }; inflection = derive2 { name="inflection"; version="1.3"; sha256="168ms6hfakr6wql45r9qvk7hpas6sgpaiqyxicihsq0j3dpzvys4"; depends=[]; }; influence_ME = derive2 { name="influence.ME"; version="0.9-9"; sha256="0f6d2hvs9qllyfpsp2cgh7w8yjxafclbk47n8av7j9zpp7s5yg9v"; depends=[lattice lme4 Matrix]; }; influence_SEM = derive2 { name="influence.SEM"; version="2.1"; sha256="1qhv640lngwrbdfqvw2x0x4zwv0aqzxwyfdpnivzjf5pw58nya5s"; depends=[lavaan]; }; influenceR = derive2 { name="influenceR"; version="0.1.0"; sha256="12p9362hkndlnz1rd8j2rykg57kbm6l7ks60by3rd25xg50k5jag"; depends=[igraph Matrix]; }; - influxdbr = derive2 { name="influxdbr"; version="0.14.0"; sha256="1my5c7f04w5r0kvi0hw41k5x00s0pgkfmqvwxijpggld2c2rman9"; depends=[dplyr httr jsonlite magrittr purrr rlang tibble tidyr xts zoo]; }; + influxdbr = derive2 { name="influxdbr"; version="0.14.2"; sha256="03dzw86mvbc8w38q9skjki1z17vc04k9q8dx7sd3xg6xbr10f9d9"; depends=[dplyr httr jsonlite magrittr purrr rlang tibble tidyr xts zoo]; }; infoDecompuTE = derive2 { name="infoDecompuTE"; version="0.6.0"; sha256="1gmsf4gw6xf70sh7y5hagkavknp80293sb7wgx6lycngq2acmi4w"; depends=[MASS]; }; informR = derive2 { name="informR"; version="1.0-5"; sha256="16pz47wlr1gr8z5hdnrjpczm967khqiqgdfiw15a0bby6qdvni2y"; depends=[abind relevent]; }; infotheo = derive2 { name="infotheo"; version="1.2.0"; sha256="18xacczfq3z3xpy434js4nf3l19lczngzd0lq26wh22pvg1yniwv"; depends=[]; }; @@ -7166,11 +7317,11 @@ in with self; { infutil = derive2 { name="infutil"; version="1.0"; sha256="02d0hfbkdqjj0lm1fzwwxy60831kbcjn2m4rfblpib0krkbpz72n"; depends=[ltm]; }; ini = derive2 { name="ini"; version="0.3.0"; sha256="0ybqklgbij69dvq8dxl8z2mb9fhdizcdcm9b5hg5n1x20ph3vbyj"; depends=[]; }; injectoR = derive2 { name="injectoR"; version="0.2.4"; sha256="0sa32cspp6y3m04yfmd02kxx55mk7l9jxf4r9pk1a6k3sqnj6fl8"; depends=[]; }; - inlabru = derive2 { name="inlabru"; version="2.1.2"; sha256="0xv9mc4xp7b8b8xnaislqblybkdxx1px16jqf6m2vi5ir5s5j9di"; depends=[ggplot2 rgdal rgeos sp]; }; + inlabru = derive2 { name="inlabru"; version="2.1.3"; sha256="09sdbzg3cdg43clkwnahkhyns019gjya55m6zhq340mgrnirx2i5"; depends=[ggplot2 rgdal rgeos sp]; }; inline = derive2 { name="inline"; version="0.3.14"; sha256="0cf9vya9h4znwgp6s1nayqqmh6mwyw7jl0isk1nx4j2ijszxcd7x"; depends=[]; }; inlinedocs = derive2 { name="inlinedocs"; version="2013.9.3"; sha256="13vk6v9723wlfv1z5fxmvxfqhaj68h0x3s2qq9j6ickr4wakb4ar"; depends=[]; }; inlmisc = derive2 { name="inlmisc"; version="0.3.5"; sha256="0m215fgyh17nbp2cqmyism3i77rgqkpdggc6fnpn3njxgw7wyb9m"; depends=[checkmate dplyr GA htmlwidgets igraph knitr leaflet raster rgdal rgeos sp]; }; - inpdfr = derive2 { name="inpdfr"; version="0.1.5"; sha256="161p45hj5h6yxn9w140gkcsj2y90lqc8avsj2dsg3gnzyks07as1"; depends=[ca cluster entropart metacom R_devices RColorBrewer RGtk2 SnowballC stringi tm wordcloud]; }; + inpdfr = derive2 { name="inpdfr"; version="0.1.6"; sha256="0fwznjsq4wccqfnb3a5ic1nyx538jxmlcv59xdz06y6raczjp9q9"; depends=[ca cluster entropart metacom R_devices RColorBrewer SnowballC stringi tm wordcloud]; }; insideRODE = derive2 { name="insideRODE"; version="2.0"; sha256="1ffndk8761cpkririb3g1qsq9nwmh82lcrpql9i5fksdprvdjzcw"; depends=[deSolve lattice nlme]; }; insol = derive2 { name="insol"; version="1.1.1"; sha256="0zbawkp4qb0kqb7y9ibiyy8sa9rfgbzwmcdswx6s87p0h7brrqn6"; depends=[]; }; inspectr = derive2 { name="inspectr"; version="1.0.0"; sha256="04rpr5ajpdx1d49y327dryxwxk27yljj4c96i9qglf02i9kmplkg"; depends=[openxlsx]; }; @@ -7193,7 +7344,7 @@ in with self; { intergraph = derive2 { name="intergraph"; version="2.0-2"; sha256="1ipxdrfxhcxhcbqvrzqh3impwk4xryqlqlgjl7f2mwrf365zs6ph"; depends=[igraph network]; }; interim = derive2 { name="interim"; version="0.7.0"; sha256="05hgypckfjb9pr60cv6m8lgqibdkgksw13gy8g1rmd9njs6qcb8i"; depends=[]; }; internetarchive = derive2 { name="internetarchive"; version="0.1.6"; sha256="1cx9dxlrdz1xak4jrrjs2wsq6ml8n2xl0n0s6n9h3g247j4lfvnm"; depends=[dplyr httr]; }; - interp = derive2 { name="interp"; version="1.0-29"; sha256="08f8hg6jcz4k0fsj6sjdki3v3h6fl4597s5r7vm55mnnnzqqlaly"; depends=[deldir Rcpp RcppEigen]; }; + interp = derive2 { name="interp"; version="1.0-30"; sha256="1gzxh0xz0zdw5fr9m4w4w99rg540bljwkcmlla4pc0974d6fcg6i"; depends=[deldir Rcpp RcppEigen]; }; interplot = derive2 { name="interplot"; version="0.1.5"; sha256="0svhs7mj987vravirhmp4788qvqm32v614qj7q06b2y4va477yj8"; depends=[abind arm dplyr ggplot2]; }; interpretR = derive2 { name="interpretR"; version="0.2.4"; sha256="0nfh3pyr7nn0r41xk0mfb4fs5rjkbh43lbw14x7pdmbgzpgsc22c"; depends=[AUC randomForest]; }; interval = derive2 { name="interval"; version="1.1-0.1"; sha256="1lln9jkli28i4wivwzqrsxvv2n15560f7msjy5gssrm45vxrxms8"; depends=[Icens MLEcens perm survival]; }; @@ -7205,40 +7356,41 @@ in with self; { intrval = derive2 { name="intrval"; version="0.1-1"; sha256="1p66cjpn43xib7rrnyv3jqr6bb49d3dxf888p8hxnr7kx9wfalkn"; depends=[]; }; intsvy = derive2 { name="intsvy"; version="2.1"; sha256="0fsib9w1zvg3phmzrspdc3d44rl5p222j0j9xmdhpcq9r6sy0bp9"; depends=[foreign ggplot2 Hmisc memisc plyr reshape]; }; intubate = derive2 { name="intubate"; version="1.0.0"; sha256="03ikqwai7wdahdfyzdy42xs8qpdhl9gmbak2qd82yxjl62956i8c"; depends=[]; }; - inum = derive2 { name="inum"; version="0.9-2"; sha256="0bqk9hh3ps0ria52fh3xfpis9wazh04fj9bbdd3ydj7inwj2lxxs"; depends=[]; }; + inum = derive2 { name="inum"; version="1.0-0"; sha256="1b013ak4d0iiwk5a0s7vvsl34d0hs881iq7zrvah4skb89x82cpm"; depends=[libcoin]; }; invGauss = derive2 { name="invGauss"; version="1.1"; sha256="0l93pk2sh74dd6a6f3970nval5p29sz47ynzqnphx0wl3yfmmg9c"; depends=[optimx survival]; }; invLT = derive2 { name="invLT"; version="0.2.1"; sha256="0dcr2cclgzkvsw1lysmjrkwgahas96rjc328yc7a1a56pf62kw2v"; depends=[]; }; investr = derive2 { name="investr"; version="1.4.0"; sha256="0l47bfwxssfr3maprkpwnmgxnxccl3ch4grc7f968iiqk83mcxw9"; depends=[nlme]; }; invgamma = derive2 { name="invgamma"; version="1.1"; sha256="12ga2y4wc9bc5zz6vimvxwgjpsx3ys3209nq63gscbw559ydxa5a"; depends=[]; }; - io = derive2 { name="io"; version="0.2.4"; sha256="1y2va6hcsdzsak6ljgj4sxin5zfr4azrqc8b9qlxcaajyyji2crx"; depends=[filenamer stringr]; }; - ioncopy = derive2 { name="ioncopy"; version="1.0"; sha256="1idk899zxvpvnswdwlpkhy5v8id6xmrbp6hg4rmrlpp3wfxw3ad5"; depends=[multtest]; }; + io = derive2 { name="io"; version="0.3.0"; sha256="16mnbxq217ixfg2qfqrj97qqfpc5dj622hf80nwray6hp47lbw2s"; depends=[filenamer stringr]; }; + ioncopy = derive2 { name="ioncopy"; version="2.0.1"; sha256="1iy4a894yp91f7sm89hvr9sh69abjrygx4yaks1d405vbfxa6z58"; depends=[multtest shiny]; }; ionflows = derive2 { name="ionflows"; version="1.1"; sha256="1k9yz82hbjwljyg4cmi675ppykrc2yq9md8x1hhkfxmp070whcxl"; depends=[Biostrings]; }; ionicons = derive2 { name="ionicons"; version="0.1.1"; sha256="0v7icjx2bpb0hd3j8a14lijklyjkmw7qgp336z66wzscm6f411ip"; depends=[png rsvg xml2]; }; ionr = derive2 { name="ionr"; version="0.3.0"; sha256="18rv5n5gihb6pz36s45yj17sdjsbj4485k4lnggdjj1gbbjkz2ni"; depends=[gplots psych]; }; iopsych = derive2 { name="iopsych"; version="0.90.1"; sha256="0adxwxnb1zdlld3icdggx7cq6cp8z4h1jf105485w322a8c6s9ik"; depends=[mco mvtnorm]; }; iosmooth = derive2 { name="iosmooth"; version="0.94"; sha256="06xgzhjgb6pznjzfli193q7kn8sh5jmqsssgymwj98bw7iwn4q3z"; depends=[]; }; - iotools = derive2 { name="iotools"; version="0.1-12"; sha256="1b2crnhx84h1gp10sy2mkhi9vylp9z97ld16jijddzlf4v23bmlx"; depends=[]; }; + iotables = derive2 { name="iotables"; version="0.2.4"; sha256="17xw0xjj6xy99f41ln043agaqcw6q3s0i99as06471kyscgan8n7"; depends=[dplyr eurostat forcats magrittr plyr tidyr]; }; + iotools = derive2 { name="iotools"; version="0.2-5"; sha256="0rn6kvlcijnhlwajh6nmi80qlamxgz0x3pn09yp4hyfpl3zxg1fz"; depends=[]; }; ipdmeta = derive2 { name="ipdmeta"; version="2.4"; sha256="0k9wqpmrvqdh73brmdzv86a2dbyddjyyyqzqgp1vqb3k48k009s2"; depends=[nlme]; }; ipdw = derive2 { name="ipdw"; version="0.2-6"; sha256="1jfixvywxdhnpqz62ld2c8n6yacg88q3y1n1aisqqb7szz0zf23z"; depends=[gdistance raster sp]; }; ipflasso = derive2 { name="ipflasso"; version="0.1"; sha256="12cyn7wpkrjqrjccb26mi375ijqplps4216ldj7w3az9g8pzihv3"; depends=[glmnet survival]; }; ipfp = derive2 { name="ipfp"; version="1.0.1"; sha256="12aklhf9p70r9b2wi0qgbl835b4lil805c31n1ka4kdix4b4cpr4"; depends=[]; }; - ipft = derive2 { name="ipft"; version="0.7.1"; sha256="1vprm3dlfh5bqn3hk5sdx2d8qdagn1a3crg8s9w1jykp7ivnahac"; depends=[apcluster cluster dplyr ggplot2 Rcpp]; }; + ipft = derive2 { name="ipft"; version="0.7.2"; sha256="0jifmkwac5yfl110200ljm3pas3321j068af9xqzqs0av20m8hps"; depends=[apcluster cluster dplyr ggplot2 Rcpp]; }; iplots = derive2 { name="iplots"; version="1.1-7"; sha256="052n8jdhj8gy72xlr23dwd5gqycqnph7s1djg1cdx2f05iy693y6"; depends=[png rJava]; }; ipred = derive2 { name="ipred"; version="0.9-6"; sha256="1vrw1pqcpnc04x1r2h9grdfm6bivs358sww5gg90jwlvxcw69lxq"; depends=[class MASS nnet prodlim rpart survival]; }; - iprior = derive2 { name="iprior"; version="0.7.0"; sha256="17z0b7xrcmihd1lkbzv8g1yqn886gqbckasjxivk377033w6f1nq"; depends=[doSNOW foreach ggplot2 mvtnorm Rcpp RcppEigen reshape2 scales]; }; + iprior = derive2 { name="iprior"; version="0.7.1"; sha256="01sav9594grc413kf6s9jnp4hs4q9f9424qphm91xckydiqisaav"; depends=[doSNOW foreach ggplot2 mvtnorm Rcpp RcppEigen reshape2 scales]; }; ips = derive2 { name="ips"; version="0.0-7"; sha256="0r4394xbchv6czad9jz4ijnfz8ss3wfdvh7ixrdxic2xrw0ic90v"; depends=[ape colorspace XML]; }; iptools = derive2 { name="iptools"; version="0.4.0"; sha256="0c3j5sl129xl75p14qr880ll1y3yss3zqg39zbj2jp6wcv9rvafx"; depends=[AsioHeaders BH ISOcodes Rcpp]; }; - ipumsr = derive2 { name="ipumsr"; version="0.1.0"; sha256="0n66xb7hp9qyq40mn5xsapkbs4m257kmpyy7lwba3ycs82zg6wxh"; depends=[dplyr haven purrr raster Rcpp readr rlang stringr tibble tidyr xml2]; }; + ipumsr = derive2 { name="ipumsr"; version="0.1.1"; sha256="0bms1jl1hwqcz6awdgs0wpxvxgsydrvfmp10qnhglh52nckf0dyb"; depends=[dplyr haven purrr raster Rcpp readr rlang stringr tibble tidyr xml2]; }; ipw = derive2 { name="ipw"; version="1.0-11"; sha256="11a34j6lp329ran2r9kxn8184kfmibkdig74lsy6lj4w4w0d71cm"; depends=[geepack MASS nnet survival]; }; iqLearn = derive2 { name="iqLearn"; version="1.4"; sha256="0vgnfr6x6f6qlnag63brnkdymlmm2vbkl8fg02w98qsc48lal454"; depends=[]; }; iqspr = derive2 { name="iqspr"; version="2.3"; sha256="190d0mc36l3ggh62km3z7ylhi9f0wp4brkwmm72qjqbm1przvk0w"; depends=[doParallel fingerprint ggplot2 glmnet gridExtra kernlab ranger rBayesianOptimization rcdk tictoc xgboost]; }; irace = derive2 { name="irace"; version="2.4"; sha256="07xzg4jcq0rjdq1drs3xh02y29z1gmkjkw54apmaqzc0s1pwzkk4"; depends=[]; }; ircor = derive2 { name="ircor"; version="1.0"; sha256="07apa4l4ib11xw25d44b403s3la29sqlid13q41hjrlfxafm91ld"; depends=[]; }; - irlba = derive2 { name="irlba"; version="2.3.1"; sha256="1dclzzkm75sbbqda5scj2hlqnw2sksgxbiqagxs4359fwfszi0k0"; depends=[Matrix]; }; + irlba = derive2 { name="irlba"; version="2.3.2"; sha256="0f7wb12wa0zbyllk5adcf4f517wgjpkhsx4j176i9ax6xy7jvprz"; depends=[Matrix]; }; irr = derive2 { name="irr"; version="0.84"; sha256="0njxackqj8hyf9j1yszwxbnaxgp27fc2bwyyf7dip72wc12f81n5"; depends=[lpSolve]; }; - irtDemo = derive2 { name="irtDemo"; version="0.1.2"; sha256="1kbab06lwldyp5ra71rgn4habq6yl6ggl5km1sj9bbqa6n4gqvwz"; depends=[fGarch shiny shinydashboard]; }; + irtDemo = derive2 { name="irtDemo"; version="0.1.3"; sha256="057m8p6qnws09kbq30712hfqkdyqkshpc4vprmj65mrdx6kwvqr7"; depends=[fGarch shiny shinydashboard]; }; irtProb = derive2 { name="irtProb"; version="1.2"; sha256="12wnvbzkh0mx9i3iyh1v2n2f2wjsjj7ad3dgv9xj949x4nbz16j0"; depends=[lattice moments]; }; - irtoys = derive2 { name="irtoys"; version="0.2.0"; sha256="1rjw7f8r7kg4yrlkv6cwiiggm6hgx3gqc4jzcmvvmv0ycyi2w3pw"; depends=[ltm sm]; }; + irtoys = derive2 { name="irtoys"; version="0.2.1"; sha256="0h6iiaxikhbxhbyksbjnb09qdxinlkwr2v9yzs5wslbni14paq5q"; depends=[ltm sm]; }; irtrees = derive2 { name="irtrees"; version="0.1.0"; sha256="03jmfyx1ia987zhi74fmmcdz70wnm8c7z5z30rwzd1cs11dijjwv"; depends=[]; }; isa2 = derive2 { name="isa2"; version="0.3.5"; sha256="17vm0906szhrh2k5x694vwcfijbzmd1v3axpszfybc0lgds437cv"; depends=[lattice]; }; isdals = derive2 { name="isdals"; version="2.0-4"; sha256="15p432fskdz2r8523cw122mfhvrq8vdsdsrd0kz9yfin4b5z3zfh"; depends=[]; }; @@ -7250,7 +7402,7 @@ in with self; { isocir = derive2 { name="isocir"; version="2.0-6"; sha256="0dkxdx2g1c579q97r45shws2gylkwqlvrhmc14ddmzi45xhxlql6"; depends=[circular combinat TSP]; }; isopam = derive2 { name="isopam"; version="0.9-13"; sha256="0y1yy0922kq5jxyc40gz8sk9vlzwfkfg5swmc6lk4007g9mgc8fm"; depends=[cluster vegan]; }; isopat = derive2 { name="isopat"; version="1.0"; sha256="0fznvgycyd35dh7pbq1xhp667gsficlmycn5pcrqcbs89069xr1s"; depends=[]; }; - isoph = derive2 { name="isoph"; version="1.1.1"; sha256="1sm03lr03w5zhbi4dl27sid9wxil9891317aichipkyrvqbkkri1"; depends=[Iso survival]; }; + isoph = derive2 { name="isoph"; version="1.1.2"; sha256="1qw98cnil3rb9d3vbii8drca744qig6bfd3rc74dxm23cj86f66g"; depends=[Iso survival]; }; isotone = derive2 { name="isotone"; version="1.1-0"; sha256="0alk0cma5h3yn4w2nqcahprijsm89b0gby9najbngzi5vnxr6nvn"; depends=[nnls]; }; isotonic_pen = derive2 { name="isotonic.pen"; version="1.0"; sha256="1lgw15df08f4dhrjjfr0jqkcvxwad92kflj2px526pcxwkj7cj3i"; depends=[coneproj Matrix]; }; issueReporter = derive2 { name="issueReporter"; version="0.1.0"; sha256="18s35f5d30vivmlcg0ycni3r8mrf4gnn7x10qdcnpisrlsjx6jbd"; depends=[httpuv httr jsonlite rmarkdown tint]; }; @@ -7260,13 +7412,13 @@ in with self; { itcSegment = derive2 { name="itcSegment"; version="0.6"; sha256="0wzp84p6cysk2488p9g9p0r8950ry5wqg13kd34yixzp9m3rx0w4"; depends=[maptools raster rgeos sp]; }; iteRates = derive2 { name="iteRates"; version="3.1"; sha256="1dycmlm3vldc60wz2jjdfbla14383911zfahgal5mx8whxwq95c5"; depends=[ape apTreeshape geiger gtools MASS partitions VGAM]; }; iterLap = derive2 { name="iterLap"; version="1.1-3"; sha256="079d4hxf1ha8pgibzb4r1yk7xqpzndd7hjbp8294qb26jvvcnd8q"; depends=[quadprog randtoolbox]; }; - iterators = derive2 { name="iterators"; version="1.0.8"; sha256="1f057pabs7ss9h1n244can26qsi5n2k3salrdk0b0vkphlrs4kmf"; depends=[]; }; - iterpc = derive2 { name="iterpc"; version="0.3.3"; sha256="1dqckb3raq5d6fy0h4ikg2xk61pin1hd4cdvpbngzgjzn6b5q1f6"; depends=[gmp iterators Rcpp]; }; + iterators = derive2 { name="iterators"; version="1.0.9"; sha256="16sycjq912ix52fjxjhcwiaqr0yj1v5iqmrvjljd3z857031w06y"; depends=[]; }; + iterpc = derive2 { name="iterpc"; version="0.3.4"; sha256="1nbwd6lx6srjb94skghy4jd323sn8a08wvh8r5zqa4l69qg47r65"; depends=[gmp iterators Rcpp]; }; itertools = derive2 { name="itertools"; version="0.1-3"; sha256="1ls5biiva10pb1dj3ph4griykb9vam02hkrdmlr5a5wf660hg6xn"; depends=[iterators]; }; itertools2 = derive2 { name="itertools2"; version="0.1.1"; sha256="0yra3x9ddvn5pp3jibm69205zazv81bz0cflw4mdvxpqadaf9f96"; depends=[iterators]; }; itree = derive2 { name="itree"; version="0.1"; sha256="164zgr142hcp9plnbccs6m823p4m0prk73bvp54bc7bqnqmc3d9a"; depends=[]; }; itsadug = derive2 { name="itsadug"; version="2.3"; sha256="0wzdy82h05264n9cr84w5j98vz24was9hh1y0wdp56ws3dfbav9m"; depends=[mgcv plotfunctions]; }; - itsmr = derive2 { name="itsmr"; version="1.7"; sha256="1chqhp57rjsbkc4c0qyx28g1szx0ahbs194dv0rmmcanfimfd0bp"; depends=[]; }; + itsmr = derive2 { name="itsmr"; version="1.8"; sha256="1w2sjdw9s4smsqdbjabj9jjync0fb931aajjbqhm49cx0g72hi8g"; depends=[]; }; itunesr = derive2 { name="itunesr"; version="0.1"; sha256="0vfn3vvbfl0ckgr50449xffj8726wsa120ibppbzhalp8rb6hq4a"; depends=[curl jsonlite lubridate xml2]; }; ivbma = derive2 { name="ivbma"; version="1.05"; sha256="0d7kg6pkdx1aj1i6kqs2r7j1klxxwymml63qnrq6a6fia3ck9kk9"; depends=[]; }; ivfixed = derive2 { name="ivfixed"; version="1.0"; sha256="0a26zrkvz0ffq4zxdx5vhr1nvsi9c15s6gvc1zy2pddjz31x2xi5"; depends=[Formula]; }; @@ -7281,35 +7433,37 @@ in with self; { jackknifeKME = derive2 { name="jackknifeKME"; version="1.2"; sha256="0c5shl6s46kz7a623gccqk2plrrf2g29nwr6vbny6009pq3jvzam"; depends=[imputeYn]; }; jackstraw = derive2 { name="jackstraw"; version="1.1.1"; sha256="18iah8sq64p7c6rxs21w8rbxvbmbh03jzqbam1ilp46ayfqzk9qc"; depends=[corpcor lfa]; }; jacpop = derive2 { name="jacpop"; version="0.5"; sha256="056c82d4a10rgq0p4p63y9i94dy1kqp3yh7xms9nx9q2xb940xb5"; depends=[]; }; - jagsUI = derive2 { name="jagsUI"; version="1.4.8"; sha256="0hz2xp13dhsh9w5f8h1s372d8fa3l2m2sx1g8z58s2b8virzd0yn"; depends=[coda lattice rjags]; }; + jagsUI = derive2 { name="jagsUI"; version="1.4.9"; sha256="1c2fq7q3kvf092j6r9ci0gigjpb61dj19phzm8mqi05q2k08siin"; depends=[coda lattice rjags]; }; james_analysis = derive2 { name="james.analysis"; version="1.0.1"; sha256="1b2n4ds4ivfk564z87s2rxjl9j0y4drd3cmyv8jqpccmdvx1137d"; depends=[naturalsort rjson]; }; janeaustenr = derive2 { name="janeaustenr"; version="0.1.5"; sha256="1wyn4qc28a3sval8shmyi2d7s4nl3jh96s8pzq871brxcmrncbwr"; depends=[]; }; - janitor = derive2 { name="janitor"; version="0.3.0"; sha256="1x2598yv6r2z4q13vbzsqns6d4q0bki97sqsm67pp77djpw8wkay"; depends=[dplyr magrittr tidyr]; }; + janitor = derive2 { name="janitor"; version="0.3.1"; sha256="0s2inn0apzwrvm5dvvdh36n9fhhrwvfbs6f3fn6byrbd713xl7rq"; depends=[dplyr magrittr tidyr]; }; jaod = derive2 { name="jaod"; version="0.1.0"; sha256="0wh1nlfhks4c1dga6h7554pg44pamj73x5in71k2xw0yp292zm6x"; depends=[crul jsonlite tibble]; }; + jcext = derive2 { name="jcext"; version="0.1"; sha256="18vmf57l2kv3rvi6laqp948m8mjkdxdy0vi4xp68480b2mjmvij1"; depends=[ggplot2 maps RColorBrewer rworldmap sp stringr]; }; jcolors = derive2 { name="jcolors"; version="0.0.1"; sha256="0a5p8778s14rk7xsivmb0g0c4kzdvbhyxsl8v1lk3cpq6898zv2d"; depends=[ggplot2 scales]; }; + jdx = derive2 { name="jdx"; version="0.1.2"; sha256="0963h1ppasw5psxgxzav0mnwc5gq0ah5xv5cyhnm8d1a66svn6pw"; depends=[rJava]; }; jetset = derive2 { name="jetset"; version="3.4.0"; sha256="0c99h5npsv2gf5d59s4qhkaqmjhbwa3prcykk24wzhnpfq6y6xhp"; depends=[AnnotationDbi org_Hs_eg_db]; }; jiebaR = derive2 { name="jiebaR"; version="0.9.1"; sha256="1qv4k5fgi40ppivdk3mxkhawyf2443h2lz5b9gvai9sqj6vf0s8k"; depends=[jiebaRD Rcpp]; }; jiebaRD = derive2 { name="jiebaRD"; version="0.1"; sha256="1wadpcdca4pm56r8q22y4axmqdbb2dazsh2vlhjy73rpymqfcph4"; depends=[]; }; jmcm = derive2 { name="jmcm"; version="0.1.8.0"; sha256="0nv30shwd1219cvs9kaql0n7ppwqngj3avf2qd7nzrnbqp2gl23h"; depends=[Formula Rcpp RcppArmadillo]; }; jmetrik = derive2 { name="jmetrik"; version="1.0"; sha256="0xnbvby03fqbxgg0i0qxrrzjv98783n6d7c1fywj81x487qlj77j"; depends=[]; }; - jmotif = derive2 { name="jmotif"; version="1.0.2.900"; sha256="0zgj1g8vy2cj2kyschbr1xb1mb862gniva0sa8qr9p8vvb03ja4v"; depends=[Rcpp RcppArmadillo]; }; - jmuOutlier = derive2 { name="jmuOutlier"; version="1.3"; sha256="1lzqpdy2987szihsjaq6l1iggjhji0li4cj7914myj3vzfcif8gw"; depends=[]; }; - jmv = derive2 { name="jmv"; version="0.8"; sha256="0zxq16yn3hn4hnlm7914pz1zdypppa25vdbv11qvp77mhprpvj4f"; depends=[afex BayesFactor car GGally ggplot2 ggridges GPArotation jmvcore lavaan lsmeans multcomp mvnormtest PMCMR psych R6 vcd vcdExtra]; }; + jmotif = derive2 { name="jmotif"; version="1.0.3"; sha256="1llmrksajrd35kfdzq2vqfm17yv5kwark6gz3rvyzcmbrqk5spqv"; depends=[Rcpp RcppArmadillo]; }; + jmuOutlier = derive2 { name="jmuOutlier"; version="1.4"; sha256="1vrihjvq8l2q7d3z80fkzzzwg6xmnfi8sipsgwic1lcbv6vnqndp"; depends=[]; }; + jmv = derive2 { name="jmv"; version="0.8.1.16"; sha256="1m7h0sbva865ki2wf0sxlb6bl1qw936grks2g4h82i2xq9nrlrhh"; depends=[afex BayesFactor car emmeans GGally ggplot2 ggridges GPArotation jmvcore lavaan multcomp mvnormtest PMCMR psych R6 vcd vcdExtra]; }; jmvcore = derive2 { name="jmvcore"; version="0.8.1.6"; sha256="1k1w4c0c8ayjzhbi4fqxr2pcynf73jhkr4wc933nijhkyd6w8m29"; depends=[base64enc R6 rjson]; }; jocre = derive2 { name="jocre"; version="0.3.3"; sha256="1i9n3r16pq6r4sy3fc1rxpil5ws8v2is0xdxafinvwr1hzkv1gz6"; depends=[boot KernSmooth plyr TSP]; }; joinXL = derive2 { name="joinXL"; version="1.0.1"; sha256="1l76bckjz5r1kdsh0s10i0gpca12rkfkp14346fn7avdcw73v23i"; depends=[data_table openxlsx R_utils rChoiceDialogs Rcpp readxl rJava timeDate timeSeries]; }; - joineR = derive2 { name="joineR"; version="1.2.2"; sha256="0xx89ykympdff8a5zz58syj771kbpzrq393hw5z1rgjswzlyi8r9"; depends=[lattice MASS nlme statmod survival]; }; - joineRML = derive2 { name="joineRML"; version="0.4.0"; sha256="11fkg5v6y1bmiv58p6gmhhis8xh5v1mll0rma8pwg0gg6viiv4ay"; depends=[doParallel foreach ggplot2 lme4 MASS Matrix mvtnorm nlme randtoolbox Rcpp RcppArmadillo survival]; }; + joineR = derive2 { name="joineR"; version="1.2.3"; sha256="0cg7bfn0hb7ayx2s7myja5qzdvsbzyk8fbb1x5z0fp21gyrpfz18"; depends=[lattice MASS nlme statmod survival]; }; + joineRML = derive2 { name="joineRML"; version="0.4.1"; sha256="08zl6wv6yvk2cgp6ln2i9ziip0mjr4jrfpb1y75ln5wi00dbna3x"; depends=[cobs doParallel foreach ggplot2 lme4 MASS Matrix mvtnorm nlme randtoolbox Rcpp RcppArmadillo survival]; }; joint_Cox = derive2 { name="joint.Cox"; version="2.14"; sha256="0k9v1v4zbv0952zyp7xv5gkmnihfswpsqzp684f9y6n6xcg3v8fx"; depends=[survival]; }; jointDiag = derive2 { name="jointDiag"; version="0.3"; sha256="0pra70jcnkqkzrxz5vc6lzi637rp5w8n9wbv9ix718vnd0j3fm3n"; depends=[]; }; jointNmix = derive2 { name="jointNmix"; version="1.0"; sha256="0ibh7hqkpzlfk3bk4d2dd64jhr8cvw563k082vwnljiam7k5nj4b"; depends=[]; }; jointPm = derive2 { name="jointPm"; version="2.3.1"; sha256="1c2cn9sqwfyv9ksd63w8rrz0kh18jm2wv2sfdkgncjb7vfs4hbv9"; depends=[]; }; jointseg = derive2 { name="jointseg"; version="1.0.1"; sha256="0wa531b5shrxhnzflfjqn2wypfb565qc2c8wngysgrgyj1kjq1pl"; depends=[acnr DNAcopy matrixStats]; }; - jomo = derive2 { name="jomo"; version="2.5-1"; sha256="18474na2c1b1950fwn1zzlgbijdawgfjk55lxmvf4czf6annyach"; depends=[lme4 survival]; }; + jomo = derive2 { name="jomo"; version="2.5-3"; sha256="1ig6r4sc4c2vf3h51by78610c5yqd7ap8gqcf0hswn3h2zsf6vm8"; depends=[lme4 survival]; }; jose = derive2 { name="jose"; version="0.1"; sha256="1cvrjcx902pbh9xryph1kilmyf0rmbk671jvqd19a2kfwpcw7gqc"; depends=[jsonlite openssl]; }; jpeg = derive2 { name="jpeg"; version="0.1-8"; sha256="05hawv5qcb82ljc1l2nchx1wah8mq2k2kfkhpzyww554ngzbwcnh"; depends=[]; }; - jpmesh = derive2 { name="jpmesh"; version="1.0.0"; sha256="09aw01yyca0bqjpzqavl1sb89kc3yplja8gd30mab0yyphg71qcx"; depends=[dplyr leaflet miniUI purrr readr rlang sf shiny tibble tidyr]; }; - jpndistrict = derive2 { name="jpndistrict"; version="0.2.0"; sha256="106i3mxxlfj2mq0ghymp39i70mc1w71mrycza31dpccmp1k9habd"; depends=[dplyr leaflet magrittr miniUI readr sf shiny stringi tibble]; }; + jpmesh = derive2 { name="jpmesh"; version="1.0.1"; sha256="1c8swlqjaaq4jqhs0cda704c17ykk80vmqnlxrizfl87qvvl5ak6"; depends=[dplyr leaflet miniUI purrr readr rlang sf shiny tibble tidyr]; }; + jpndistrict = derive2 { name="jpndistrict"; version="0.3.0"; sha256="0vnawpkrkhv0vjvw49ldn86qy07pqsdw7mmq13h3l4qw5jmfsd9i"; depends=[dplyr jpmesh leaflet magrittr miniUI purrr readr rlang sf shiny stringi tibble tidyr]; }; jqr = derive2 { name="jqr"; version="1.0.0"; sha256="1jdr3wb1fd2zjmmdicqhskgk7xbn5y6998fi9szj86p8smfckl74"; depends=[lazyeval magrittr]; }; jrich = derive2 { name="jrich"; version="0.60-35"; sha256="1y486bfqmfg3f22wm0lfk3lh20ljgi8qrgn5jji0f417wh48nf0x"; depends=[ape]; }; jrvFinance = derive2 { name="jrvFinance"; version="1.03"; sha256="16mki26ns593xn1p1la2ihkddlwvzwdvjr3h2vz71bq5db11iffq"; depends=[]; }; @@ -7319,16 +7473,17 @@ in with self; { jsonlite = derive2 { name="jsonlite"; version="1.5"; sha256="00lfg464jhf7k01bal9pcjvbdf5cxk6xi2h46hccp1x3h883g434"; depends=[]; }; jsonvalidate = derive2 { name="jsonvalidate"; version="1.0.0"; sha256="08c1s8fk95np4l6km077dmd1nibhhggi80f5465hhbq521gm0awl"; depends=[V8]; }; jtGWAS = derive2 { name="jtGWAS"; version="1.5.1"; sha256="06cgsncgrqslxcc7s0lb3zwa85bhzkmjzz3f04716xpzwa186vxq"; depends=[Rcpp]; }; - jtools = derive2 { name="jtools"; version="0.9.0"; sha256="1lxjg5hwgpj34h4jk041xpqklsb6v81d6q0w2dvxinrk7j1p51wr"; depends=[ggplot2]; }; + jtools = derive2 { name="jtools"; version="0.9.4"; sha256="0vljw3n1ykvf3f2ydar9rb24cgiqljh195g2jc4dx77zy1kcfh4d"; depends=[ggplot2]; }; jtrans = derive2 { name="jtrans"; version="0.2.1"; sha256="18zggqdjzjhjwmsmdhl6kf35w9rdajpc2nffag4rs6134gn81i3m"; depends=[]; }; jug = derive2 { name="jug"; version="0.1.7"; sha256="01m6hyr26f6zih49pz2bmmr8ypdl1qiz0wv3padcy68kaccf44a4"; depends=[base64enc httpuv infuser jsonlite magrittr mime R6 webutils]; }; - junr = derive2 { name="junr"; version="0.1.2"; sha256="1b1x0fma51wapchia49351wig57fgwc5sw7xsm8rb1g30k294rkz"; depends=[httr jsonlite]; }; + junctions = derive2 { name="junctions"; version="1.0"; sha256="13vqmy4968hpxi6vs3kfgd802miw8navcvsjmak6knwa2mjhhd54"; depends=[Rcpp]; }; + junr = derive2 { name="junr"; version="0.1.3"; sha256="0wcglpziyi6z4n7w70srziljba3jkb27iqxbxz4kk6774c7valbf"; depends=[httr jsonlite]; }; jvnVaR = derive2 { name="jvnVaR"; version="1.0"; sha256="0zh0dc6wqlrxn5r2yv9vkpyfb8xsbdidkjv9g6qr94fyxlbs4yci"; depends=[]; }; jwutil = derive2 { name="jwutil"; version="1.1.1"; sha256="114vph86722v89iwyla7skl06cv87ymfy6nmca5iyxwx1z78zddz"; depends=[checkmate Rcpp]; }; kSamples = derive2 { name="kSamples"; version="1.2-7"; sha256="0f19rjngk0lg6s8c6h5l55qpxp8sl4vxj3kpi05cizzncny9b9bj"; depends=[SuppDists]; }; - kableExtra = derive2 { name="kableExtra"; version="0.6.1"; sha256="0v27ncspb5l348spvfc0qlfyalv9hm4z5w6k5yp36a4qpdlkd42s"; depends=[knitr magrittr readr rmarkdown rvest scales stringr viridisLite xml2]; }; + kableExtra = derive2 { name="kableExtra"; version="0.7.0"; sha256="1rj41kcvc46nn6fvqhsc9v1snq2phh09vchkdng1avbm3g5sld62"; depends=[htmltools knitr magrittr readr rmarkdown rvest scales stringr viridisLite xml2]; }; kader = derive2 { name="kader"; version="0.0.8"; sha256="15f2swgngw5rdjdsh5kd55wm2nivlfs8pv4mdn0b75qihwgg1zkk"; depends=[]; }; - kamila = derive2 { name="kamila"; version="0.1.1.1"; sha256="06jl868i8a6zg3pyaf1r6ccd33ya5f83apc5w6d3m111dzdqqlcy"; depends=[abind gtools KernSmooth mclust plyr Rcpp]; }; + kamila = derive2 { name="kamila"; version="0.1.1.2"; sha256="0mcray8byifjddsmwzmcpmw3zpm1y8q3nfrgpgacb36rwprqkj6z"; depends=[abind gtools KernSmooth mclust plyr Rcpp]; }; kangar00 = derive2 { name="kangar00"; version="1.1"; sha256="1rm3mjghgfq8fliha6flqvcb6m4xag1697c0q5smg515453l0s0p"; depends=[bigmemory biomaRt CompQuadForm data_table igraph KEGGgraph lattice sqldf]; }; kantorovich = derive2 { name="kantorovich"; version="2.0.0"; sha256="0y965nkhgk0z2q2j3sycfg76aqqi3ry8avg0bz9xggpd60bhh5vd"; depends=[gmp lpSolve rcdd Rglpk]; }; kaphom = derive2 { name="kaphom"; version="0.2"; sha256="09rxvg37nbjs78l9yh86a2kd428dnfws2wz82mx9frys3ys6zhfl"; depends=[]; }; @@ -7346,17 +7501,19 @@ in with self; { kehra = derive2 { name="kehra"; version="0.1"; sha256="1cc0bmbg0dncay50ap7cs2516qngzz3ddaab0jk5r6lwfq87h8qx"; depends=[Hmisc raster reshape2 sp stringr xts zoo]; }; kelvin = derive2 { name="kelvin"; version="2.0-0"; sha256="04xdgpmysksm79m3vqmb4zra3pq09nv99w4fbdla1lmy7z8pkdrk"; depends=[Bessel]; }; kequate = derive2 { name="kequate"; version="1.6.1"; sha256="1rjya1rnlfk2ziiwhkgshlyk3g0388591q3q01a3vgmgsb3cpxl6"; depends=[equateIRT ltm mirt]; }; - keras = derive2 { name="keras"; version="2.0.9"; sha256="0c8b450chfmwm8hq3h3vgajdy4vi6zigvqikk2509n5x61qxidn8"; depends=[magrittr R6 reticulate tensorflow tfruns zeallot]; }; + keras = derive2 { name="keras"; version="2.1.3"; sha256="02pzwl6z06f36njns8kirngqzkk3f1bwzifk05xm41ry9rppa5l3"; depends=[magrittr R6 reticulate tensorflow tfruns zeallot]; }; kerasR = derive2 { name="kerasR"; version="0.6.1"; sha256="1yi7710vgcwz0jhishbga41sc6qyk83a0avmq01dvqjsz3cdfsfc"; depends=[reticulate]; }; + kerasformula = derive2 { name="kerasformula"; version="0.1.1"; sha256="0c19208y9v8a1w4p54z7yng5vvmb6h79fs0a20ij98ngys9afbwz"; depends=[dplyr keras Matrix]; }; kerdiest = derive2 { name="kerdiest"; version="1.2"; sha256="16xj2br520ls8vw5qksxq9hqlpxlwmxccfk5balwgk5n2yhjs6r3"; depends=[chron date evir]; }; kergp = derive2 { name="kergp"; version="0.2.0"; sha256="1xamj19v84m1f9ls8ac8xbm6airyjf96i1l48yy4l2rvjdmx6m9l"; depends=[doParallel MASS numDeriv Rcpp testthat]; }; kernDeepStackNet = derive2 { name="kernDeepStackNet"; version="2.0.2"; sha256="04bdggxvggmppp289n2zw6ijdm7y05gws6z7bp6fr8n1zsxy2w3c"; depends=[caret DiceKriging DiceOptim GA GenSA glmnet globalOptTests lhs matrixStats mvtnorm Rcpp RcppEigen]; }; kerndwd = derive2 { name="kerndwd"; version="2.0.1"; sha256="1grinlqjjsxw1x152f9y38lhijh74zc831ddc0lk2niq2rvzszdw"; depends=[]; }; kernelFactory = derive2 { name="kernelFactory"; version="0.3.0"; sha256="001kw9k3ivd4drd4mwqapkkk3f4jgljiaprhg2630hmll064s89j"; depends=[AUC genalg kernlab randomForest]; }; - kernelboot = derive2 { name="kernelboot"; version="0.1.2"; sha256="0k06zxq8978v7zsfylxld64819vd3wj33brpxz0fan3ni01rh7kn"; depends=[future Rcpp]; }; + kernelboot = derive2 { name="kernelboot"; version="0.1.4"; sha256="1d1l9sbnlyx5a88qmd6q2zxlkr6dykcwlkk648yqmmfvqmq4xjmj"; depends=[future future_apply Rcpp]; }; kernlab = derive2 { name="kernlab"; version="0.9-25"; sha256="0qnaq9x3j2xc6jrmmd98wc6hkzch487s4p3a9lnc00xvahkhgpmr"; depends=[]; }; kernplus = derive2 { name="kernplus"; version="0.1.0"; sha256="0wibp4bbzxmjdyhp643v76accjy1w8jixmwgsdfrq2yjxacgnwcb"; depends=[circular KernSmooth mixtools]; }; kernscr = derive2 { name="kernscr"; version="1.0.3"; sha256="0h3xv76dxch8kv4z7cgx60iaikk6906n75c4kc1mccpw0jvyxrvb"; depends=[MASS mvtnorm]; }; + kexpmv = derive2 { name="kexpmv"; version="0.0.3"; sha256="1nx2bpyc06vlr78nhig4zaaygphjp4wqsz9jzhs4qx8wy3kh7rmy"; depends=[Rcpp SparseM]; }; keyholder = derive2 { name="keyholder"; version="0.1.1"; sha256="1dp326vayjzjpfhd2ajrpqjvbn6vvqa7iw9mdhblprz4cvv65g30"; depends=[dplyr rlang]; }; keyplayer = derive2 { name="keyplayer"; version="1.0.3"; sha256="0j4n46r9ivkbzqz8g22dq2bpmx7bs05yb5qp27p9jnfh5x19v2ds"; depends=[igraph matpow sna]; }; keypress = derive2 { name="keypress"; version="1.1.1"; sha256="0w8hcxxx47zyz2cbz2s8va2rfb6s2ziw9ck1slq9kh3aqsx3i9g0"; depends=[]; }; @@ -7364,16 +7521,16 @@ in with self; { keyringr = derive2 { name="keyringr"; version="0.4.0"; sha256="04f0z6mqj75l5qhiab0zvjsvz3jz1bp6dfazkpgihjmls5k11dnh"; depends=[stringr]; }; kfda = derive2 { name="kfda"; version="1.0.0"; sha256="0861hzry55gj8ykdd8cwil1wb7234pkmipp4v1749fpmzggq1xgi"; depends=[kernlab MASS]; }; kfigr = derive2 { name="kfigr"; version="1.2"; sha256="0hmfh4a95883p1a63lnziw8l9f2g0fn0xzxzh36x9qd9nm7ypmkw"; depends=[knitr]; }; - kgc = derive2 { name="kgc"; version="1.0.0.1"; sha256="0yy8rp4h0z6x4h5fpg92z75xks2salv34vlkcgm2a8739c2dnkh3"; depends=[plyr shiny shinythemes]; }; + kgc = derive2 { name="kgc"; version="1.0.0.2"; sha256="14zbcimnglh5jj07dcaxp1dfjaz8syswy29nf8z39qmslv1hg9kk"; depends=[plyr shiny shinythemes]; }; kgschart = derive2 { name="kgschart"; version="1.3.5"; sha256="1gdsrmnv8z99cldvig7grlq8gsbv3wpx7zdamw85lz563n4ln94d"; depends=[abind deepnet ggplot2 gridExtra magrittr matrixStats nnet png shiny stringr]; }; - kimisc = derive2 { name="kimisc"; version="0.3"; sha256="1cdjhfdfidilvz0w92xfjwwnp2h73y8l1n7fxnh5jsv6wnx491l4"; depends=[plyr pryr]; }; + kimisc = derive2 { name="kimisc"; version="0.4"; sha256="0nbjspbq9akhmamfdn192p5b6ki7xqhp422ih6v77xsnrhl5m24z"; depends=[memoise plyr pryr]; }; kin_cohort = derive2 { name="kin.cohort"; version="0.7"; sha256="0wijsjz0piz5j9rm2nr3d5dfpiyba740mbfbkmfll9pz72s58wz8"; depends=[survival]; }; kineticF = derive2 { name="kineticF"; version="1.0"; sha256="1k54zikgva9fw9c4vhkc9b0kv8sq5pmc962s8wxr6qv97liv9p46"; depends=[circular lqmm MASS plotrix sp splancs]; }; kinfit = derive2 { name="kinfit"; version="1.1.14"; sha256="0gb43pghgllb9gzh8jzzpfmc46snv02ln4g3yqsdah3cyqnck0ih"; depends=[]; }; kinship2 = derive2 { name="kinship2"; version="1.6.4"; sha256="19r3y5as83nzk922hi4fkpp86gbqxdg1bgng798g1b073bp6m9yj"; depends=[Matrix quadprog]; }; kirby21_base = derive2 { name="kirby21.base"; version="1.6.0"; sha256="1l9ynmkh27m6c3862j7xqiydanknd1zplqvsay5amh7k13isj9gg"; depends=[git2r]; }; - kirby21_fmri = derive2 { name="kirby21.fmri"; version="1.5.1"; sha256="1hifxp6ilzgakbdz067lmpz1wrq8ah9a8kv542717z1pn6bmw69w"; depends=[kirby21_base kirby21_t1]; }; - kirby21_t1 = derive2 { name="kirby21.t1"; version="1.5.1"; sha256="0gs39fy8wxrilgfyz1dlkaar4gf9qifcdxc4vzy2vha0z2ci46sy"; depends=[kirby21_base]; }; + kirby21_fmri = derive2 { name="kirby21.fmri"; version="1.6.0"; sha256="15dhb7d2xrka55gg4f1n74dysj74c4fv9hpdx2n1vc79n90zl6yr"; depends=[kirby21_base]; }; + kirby21_t1 = derive2 { name="kirby21.t1"; version="1.6.0"; sha256="0zanqmndm15fld31g7zpam3y3z63aw1sgk74ya2l95cn21ln34a3"; depends=[kirby21_base]; }; kissmig = derive2 { name="kissmig"; version="1.0-3"; sha256="1pi1x3gdbqrhr1km1hqj15k8wyrgs697fnxgjgxga1irbn8bi482"; depends=[raster]; }; kitagawa = derive2 { name="kitagawa"; version="2.1-0"; sha256="1ddyd0rwwmdpbq823qass5dlp2lvi9d64wpl61ik6fghms2p9ryr"; depends=[kelvin]; }; kknn = derive2 { name="kknn"; version="1.3.1"; sha256="1nzkg3dxaiqp87p56wm895qx5xn86hv5hjr73qvl1yiaxiq0x112"; depends=[igraph Matrix]; }; @@ -7385,6 +7542,7 @@ in with self; { kmconfband = derive2 { name="kmconfband"; version="0.1"; sha256="10n5w8k57faqcclwshs4m66i2i5b70i6f3xq5nqlgsi2ldkysbc9"; depends=[survival]; }; kmcudaR = derive2 { name="kmcudaR"; version="1.0.0"; sha256="1adixf4nsgnk8rgvcv37aznh8gxrfwn19ihh3c6siss51hlmhln2"; depends=[Rcpp RcppEigen]; }; kmeans_ddR = derive2 { name="kmeans.ddR"; version="0.1.0"; sha256="1i87cxakjbq1xwyjyyzv1xiqbrncsqx6baviidcdm3n0pakrqdsg"; depends=[ddR Rcpp]; }; + kmed = derive2 { name="kmed"; version="0.0.1"; sha256="0vcks4n0dpfd5cl5b8mhvhw6r2f3y12jn3d3j3dkj2grxmb9lh4c"; depends=[ggplot2]; }; kmi = derive2 { name="kmi"; version="0.5.3"; sha256="0b3nibvi0skrx3mjfzypqmdqx8s9zkn11f0ljscqpjr28idx4hr0"; depends=[mitools survival]; }; kml = derive2 { name="kml"; version="2.4.1"; sha256="1my9gcripiqc6iphycjr3srj8qxy05yvd0648vblygrx2qym5hy2"; depends=[clv longitudinalData]; }; kml3d = derive2 { name="kml3d"; version="2.4.2"; sha256="1a3hqyhrsh12l1j1xlz4zy88impw3biz6w2qc80r11m549h0m6s9"; depends=[clv kml longitudinalData misc3d rgl]; }; @@ -7393,21 +7551,21 @@ in with self; { kmodR = derive2 { name="kmodR"; version="0.1.0"; sha256="1y1pqrrralklflyb1dw8bslfcyqrw8ryijfbhkwba7ykpxcf9fda"; depends=[]; }; knitLatex = derive2 { name="knitLatex"; version="0.9.0"; sha256="1igacc2sx8897wmnhh8kngd0fq6zqbi30chy5c8jw60zc38mi3wi"; depends=[knitr]; }; knitcitations = derive2 { name="knitcitations"; version="1.0.8"; sha256="07h8d5cp52qcm0912c55j59k2p3c7s4af87qa7a9hafhgimnsdiv"; depends=[digest httr RefManageR]; }; - knitr = derive2 { name="knitr"; version="1.17"; sha256="00gljbz57n9lkvbd6az4n37gpbs8vg3fxx5p9biamhmhqyra514l"; depends=[digest evaluate highr markdown stringr yaml]; }; + knitr = derive2 { name="knitr"; version="1.19"; sha256="1gyj9bw90h4h9rc9k1iqrnzirm2f8mj45zi8bkjc6rp610vlh63j"; depends=[evaluate highr markdown stringr yaml]; }; knitrBootstrap = derive2 { name="knitrBootstrap"; version="1.0.1"; sha256="089147g7nqp99rwdxxsfmklsrwc8aia09sr8ndmrc335r33v6r6p"; depends=[knitr markdown rmarkdown]; }; + knitrProgressBar = derive2 { name="knitrProgressBar"; version="1.0.0"; sha256="18r025j4c6m0c8rir3cskc4dymnxybl076ghy6a9iy38in58v547"; depends=[R_oo R6]; }; knnGarden = derive2 { name="knnGarden"; version="1.0.1"; sha256="1gmhgr42l6pvc6pzlq5khrlh080795b0v1l5xf956g2ckgk5r8m1"; depends=[cluster]; }; knnIndep = derive2 { name="knnIndep"; version="2.0"; sha256="1fwkldgs2994svf3sj90pwsfx6r22cwwa22b30hdmd24l8v9kzn7"; depends=[]; }; knncat = derive2 { name="knncat"; version="1.2.2"; sha256="1d392910y3yy46j8my1a7m0xkij2rc6vwq5fg22qk00vqli8drz2"; depends=[]; }; knockoff = derive2 { name="knockoff"; version="0.3.0"; sha256="0irqbidp00rh07xsfyyv5d3ksa4fn9vv49rsy8ah2gb9y41iy046"; depends=[corpcor glmnet gtools Matrix Rdsdp RSpectra]; }; - knor = derive2 { name="knor"; version="0.0-3"; sha256="0va6n7rb6fnks053l52016n6crf93daa9fafjifbgmbmc0xw8c4c"; depends=[Rcpp]; }; knotR = derive2 { name="knotR"; version="1.0-2"; sha256="0kd1b9wibpwyaanz9ny61qgfvcg4d3rzpy05sfshlpp0b1y8d3xj"; depends=[]; }; kntnr = derive2 { name="kntnr"; version="0.4.1"; sha256="0d78mgmz2yhfbf4m5jaa28aazaw2wf9vf1vxl53wrnpy0hxw329y"; depends=[base64enc dplyr httr jsonlite lazyeval lubridate purrr rstudioapi stringr tibble]; }; koRpus = derive2 { name="koRpus"; version="0.10-2"; sha256="1ykaky10zkj76w44fhk6kb6dqz1pgncmdnz4r2amcm08a8h96gsr"; depends=[data_table]; }; kobe = derive2 { name="kobe"; version="1.3.2"; sha256="1z64jwrq6ddpm22cvk2swmxl1j7qyz0ddk3880c7zfq6gk7f9bxl"; depends=[coda emdbook ggplot2 MASS plyr reshape]; }; - kofdata = derive2 { name="kofdata"; version="0.1"; sha256="0xgxpb3a4qvy5f14yg5rasdms0kqwzwjvydj0f6p0zlrlbf0644v"; depends=[httr jsonlite xts zoo]; }; + kofdata = derive2 { name="kofdata"; version="0.1.3"; sha256="135fkfciya8d215iv0ir7kmd01w7rlzqfcif5jz918skrv2p9mcl"; depends=[httr jsonlite xts zoo]; }; kofnGA = derive2 { name="kofnGA"; version="1.2"; sha256="1j4gx6pkmasgbgcdlg6i5nzfrmim61c2hw34k5zfmwfbkrsgb575"; depends=[]; }; kohonen = derive2 { name="kohonen"; version="3.0.4"; sha256="1aq98qbmbzsdyimhn28qiyqfrwkwq70qmm5yhx0rvhjq53bn9622"; depends=[MASS Rcpp]; }; - kokudosuuchi = derive2 { name="kokudosuuchi"; version="0.4.1"; sha256="03cs44m3zz7f4dm6imqb22x87pq0a1w0v9c4vgh03mljssz54gp0"; depends=[curl dplyr glue httr purrr rlang sf shiny stringi stringr tibble xml2]; }; + kokudosuuchi = derive2 { name="kokudosuuchi"; version="0.4.2"; sha256="1nwydfyr9waa5h8h8nrmwxy0jx7i4893g5khfv6b4g09z6g5cyly"; depends=[curl dplyr glue httr purrr rlang sf shiny stringr tibble xml2]; }; kolmim = derive2 { name="kolmim"; version="1.0"; sha256="0g1i0cazi4nhfwdd3ywqrar1sn7bw77w38qjii045w5vqg05srkp"; depends=[]; }; komadown = derive2 { name="komadown"; version="0.1.0"; sha256="08rg2qz4dmxl4xi0d7wdl2xgdmsc29fdc0yi40yddzrbpj4vs2z4"; depends=[bookdown knitr rmarkdown]; }; kpcalg = derive2 { name="kpcalg"; version="1.0.1"; sha256="1gd5bisyfwb12l9jmwhi2arlxrabc01vgv4m1qqs23vybsd6yh52"; depends=[energy graph kernlab mgcv pcalg RSpectra]; }; @@ -7416,19 +7574,20 @@ in with self; { kpodclustr = derive2 { name="kpodclustr"; version="1.0"; sha256="1fywgdj4q3kg8y9lwnj6vxg9cwgs5ccwj6m3knfgg92f8ghnsbsw"; depends=[clues]; }; kriens = derive2 { name="kriens"; version="0.1"; sha256="1qi65k9fsbbkbw0w40rv60p5ygrvr10rmlyxdaqa5bdpcmrbly5z"; depends=[]; }; kriging = derive2 { name="kriging"; version="1.1"; sha256="04bxr34grf2nlrwvgrlh84pz7yi0r8y7dc2wk0v5h5z6yf5a085w"; depends=[]; }; - krm = derive2 { name="krm"; version="2016.7-9"; sha256="0yc8agnb4685fa00pnwsxwc4vnr2aj2dwb6zxppj62r6c59xl47f"; depends=[kyotil]; }; - ks = derive2 { name="ks"; version="1.10.7"; sha256="01s5lzv5nmj5c8siz9wpiqcnixdhcqd5z5fhc5g7x6ym3xgcc1d5"; depends=[FNN KernSmooth misc3d multicool mvtnorm rgl]; }; + krm = derive2 { name="krm"; version="2018.1-24"; sha256="0qysv61vjdz8674hn6mk0913dkm2bfkqmr7cybls9z9h4i068vdk"; depends=[kyotil]; }; + ks = derive2 { name="ks"; version="1.11.0"; sha256="1wbw6zqsm7n65hbxiabpap2nbqq7795ir2r3fd7rw125hibj73k4"; depends=[FNN kernlab KernSmooth Matrix mclust mgcv misc3d multicool mvtnorm OceanView rgl]; }; kscons = derive2 { name="kscons"; version="0.7.0"; sha256="1i4dp56y9swl5s6cipqlm5i5fknz2v0yz5g930cl5i8kx91rxwrp"; depends=[]; }; kselection = derive2 { name="kselection"; version="0.2.0"; sha256="1arg96r2pldvb89rfqnfpjxwksyac2mhmbimbkwzm7wrnbnrcn5d"; depends=[]; }; ksrlive = derive2 { name="ksrlive"; version="1.0"; sha256="1zd3ggzgjks0jay69s5m7ihbd7v7zha6ssj2m9ahnyp00ghpk83j"; depends=[tightClust]; }; - kst = derive2 { name="kst"; version="0.2-1"; sha256="1wy9cvvln994qgr0p7qa9qs1jd7gjv6ch65gg6i42cf9681m9h65"; depends=[proxy relations sets]; }; + kst = derive2 { name="kst"; version="0.3-0"; sha256="0q181gzs4xcmsyrljlsh2rmqggs62lwrnnqsmra3qq3ya18clhzz"; depends=[proxy relations sets]; }; + kstIO = derive2 { name="kstIO"; version="0.1-0"; sha256="04s8lyg7622zcq947qlx5brwf1an7icg94i5di8vwjp7d8zgczq6"; depends=[MASS pks sets stringr]; }; ktsolve = derive2 { name="ktsolve"; version="1.1"; sha256="0b5myr093v3qaj9gzbw1w728i5ij418whxxpicj51w657dcy647k"; depends=[]; }; ktspair = derive2 { name="ktspair"; version="1.0"; sha256="1v63982jidxlcf2syahcb29myv34kc790l7lwyfxx9l50ssb812n"; depends=[Biobase]; }; kulife = derive2 { name="kulife"; version="0.1-14"; sha256="070ayy6fr9nsncjjljikn2i5sp2cx3xjjqyc64y2992yx74jgvvd"; depends=[]; }; - kutils = derive2 { name="kutils"; version="1.0"; sha256="12rlvaqq0dgz9qvm7lnmr3x90gg5iz58jh3d1hf08lbj4s50a8d4"; depends=[lavaan openxlsx plyr xtable]; }; - kvh = derive2 { name="kvh"; version="1.0.1"; sha256="07isil951q1b8rdlqvbx8gnmjgjf8dmb7nswvivbcvkfigi7mr2s"; depends=[Rcpp]; }; + kutils = derive2 { name="kutils"; version="1.34"; sha256="17f6pzinmp4lcjd5glhnvbjy1yg912jccx9d4n55bini93vlcz0z"; depends=[foreign lavaan openxlsx plyr RUnit xtable]; }; + kvh = derive2 { name="kvh"; version="1.1"; sha256="1dvq7wbpx1hpjshvsihivd8q8hyhji047gifxc6cjnv778r4irb1"; depends=[Rcpp]; }; kwb_hantush = derive2 { name="kwb.hantush"; version="0.2.1"; sha256="0rjnhhzvjhhl0r2ixz9vkgnqkrnnk772253zy7xkpadj7ws69jsf"; depends=[hydroGOF lattice]; }; - kyotil = derive2 { name="kyotil"; version="2017.10-31"; sha256="0f0ji5jpkqcmqa35daxa82bw5x74gljpxgf60xbflc5xydamdhx8"; depends=[]; }; + kyotil = derive2 { name="kyotil"; version="2017.12-27"; sha256="0xd64xg3nj0pj0ziycq4ndpl8kwxfng96ag8zmqzzxk85zw2vyq3"; depends=[]; }; kza = derive2 { name="kza"; version="4.0.0"; sha256="0yfn6ijbskdkcgbgk4fwhgiiy34cw9k9vy1psi779mqd9kyjf56j"; depends=[]; }; kzfs = derive2 { name="kzfs"; version="1.5.0.1"; sha256="0gd945x1ppdw15iqcn5ijzmh07hs7zg8rjb85231bcqbh98djvfm"; depends=[digest kzft]; }; kzft = derive2 { name="kzft"; version="0.17"; sha256="1y6almhs1x21cr4bbf5fj3mnhp65ivzs869660cyg70sva853sv7"; depends=[polynom]; }; @@ -7439,18 +7598,18 @@ in with self; { laGP = derive2 { name="laGP"; version="1.5-1"; sha256="0sqzvz78p50afp892p7ghy4fmy9p3a2ik51bzzwrx6r96ax7w971"; depends=[tgp]; }; labdsv = derive2 { name="labdsv"; version="1.8-0"; sha256="0rbf7cswnj534jdi5hfaai12nbxj6l96f02c73ynraqvdqxb1bnz"; depends=[cluster MASS mgcv]; }; label_switching = derive2 { name="label.switching"; version="1.6"; sha256="0k6f31gwcjfncsgd5cm9zygplif2wr8zjqrw4gmrnxcgp2z58a9w"; depends=[combinat lpSolve]; }; + labelVector = derive2 { name="labelVector"; version="0.0.1"; sha256="0iwk8p3m2g6732q2pilwr3wlaiys15khd54r0vxsp2irlw77lzrg"; depends=[]; }; labeledLoop = derive2 { name="labeledLoop"; version="0.1"; sha256="0gq392h0sab8k7k8bzx6m7z5xpdsflldhwbpdf92zbmkbzxsz00m"; depends=[]; }; labeling = derive2 { name="labeling"; version="0.3"; sha256="13sk7zrrrzry6ky1bp8mmnzcl9jhvkig8j4id9nny7z993mnk00d"; depends=[]; }; - labelled = derive2 { name="labelled"; version="1.0.0"; sha256="02jg7zq52wfq2dw8a26vmp28bv88v651ysbqfqf7jv3dr9xgim4f"; depends=[haven]; }; + labelled = derive2 { name="labelled"; version="1.0.1"; sha256="18mz4qraxalq50rzmblsvavx4isb4194rj4iqab09qzh8ib1qzwv"; depends=[haven]; }; labelrank = derive2 { name="labelrank"; version="0.1"; sha256="03pmpkjdhgw80473kdzdz4s4828pa8f5bja2zqicxrhvyvicvz6f"; depends=[pdist]; }; - labeltodendro = derive2 { name="labeltodendro"; version="1.3"; sha256="13kpmv26zzjf5iwpr4vs797irplmaixp1agx5v80wr4lvd2hirvg"; depends=[]; }; labstatR = derive2 { name="labstatR"; version="1.0.8"; sha256="1qs76vhw6ihsriq5v0s980fxbb0pbvgwqm0a97b226cpqqabkpfm"; depends=[]; }; labstats = derive2 { name="labstats"; version="1.0.1"; sha256="1780slp9l1rqwr5ika6hv606jzbaa3g1ywzkjkd3ff2gb0cby3ni"; depends=[]; }; laeken = derive2 { name="laeken"; version="0.4.6"; sha256="1rhkv1kk508pwln1d325iq4fink2ncssps0ypxi52j9d7wk78la6"; depends=[boot MASS]; }; laercio = derive2 { name="laercio"; version="1.0-1"; sha256="0la6fxv5k9zq4pyn8dxjiayx3vs9ksm9c6qg4mnyr9vs12z53imm"; depends=[]; }; lagged = derive2 { name="lagged"; version="0.1-1"; sha256="062a9hrnp2bsahsdasml0wzqpapyslfiwy9q2mvwqsl6j2pqkk0s"; depends=[]; }; lagsarlmtree = derive2 { name="lagsarlmtree"; version="1.0-0"; sha256="0nrrr2n2q228d1c7qrhcnczmr374i56p7kr868yl19g8ddd3gx3w"; depends=[Formula partykit spdep]; }; - lakemorpho = derive2 { name="lakemorpho"; version="1.1.0"; sha256="1qdh67a6a6iibvvba12z763xf989qfh08b3xgk1hy1irgc8myvll"; depends=[cluster geosphere maptools raster rgdal rgeos sp]; }; + lakemorpho = derive2 { name="lakemorpho"; version="1.1.1"; sha256="0asrp9rvyi5ykxw922qx25rgxvyc9mh4sc7qkbpwzqw8xvgpad2z"; depends=[cluster geosphere raster rgdal rgeos sp]; }; laketemps = derive2 { name="laketemps"; version="0.5.1"; sha256="04742r379bzgbfr4243wwkb26cvfmnw50jzgygq7vblq00grzska"; depends=[dplyr reshape2]; }; lamW = derive2 { name="lamW"; version="1.3.0"; sha256="00qa1sxyqb2r7f9yidg43cq2v1285f45xpm3z928jpi424mpg0fc"; depends=[Rcpp RcppParallel]; }; lambda_r = derive2 { name="lambda.r"; version="1.2"; sha256="0vql32np716dpd0kjn7s7wgawd02ysgp2a5il4kb19nlw661ii3x"; depends=[]; }; @@ -7461,11 +7620,11 @@ in with self; { landsat8 = derive2 { name="landsat8"; version="0.1-10"; sha256="169b5ka98ka9chbmksz6syaygc9wgl8i2gz1h2xkxj3lk9jcg01r"; depends=[rgdal sp]; }; landscapeR = derive2 { name="landscapeR"; version="1.2"; sha256="1zm5mj861ycbc2m28yjqnkifx8grc4l718mf8r422m78jfakvcjy"; depends=[raster Rcpp]; }; languageR = derive2 { name="languageR"; version="1.4.1"; sha256="0grkhdjz9dcrgq6qwv7wpwmckn3mfv022c5wrx29b1dxafd0qzm0"; depends=[]; }; - languagelayeR = derive2 { name="languagelayeR"; version="1.1.0"; sha256="1588bdv2nwqvzkhj607b3r8z8hkp2bay4bhh0nm2b89q1a7r2g4v"; depends=[httr magrittr rjson]; }; + languagelayeR = derive2 { name="languagelayeR"; version="1.2.3"; sha256="1sh3k8xw88pm93wmpy1qi44i8pv5b5g6ajzas36bdi1bqm8cqzax"; depends=[attempt curl httr rjson]; }; lans2r = derive2 { name="lans2r"; version="1.0.5"; sha256="1m3hz85gl9m4vafdy7mj3z560d11mdwlwvnzy8n7d1cjqryn7a2b"; depends=[dplyr ggplot2 lazyeval R_matlab reshape2 tidyr]; }; lar = derive2 { name="lar"; version="0.1-2"; sha256="0qda0y4ag10kg83wxs3z754kc8c1dg2rwciy64klk7an4ln43i5b"; depends=[data_table treemap xlsx]; }; largeList = derive2 { name="largeList"; version="0.3.1"; sha256="0csijzlxajj0rh24w5n7fs6ss301zr6zfv5khyq4a9g437bwhc2i"; depends=[]; }; - largeVis = derive2 { name="largeVis"; version="0.2.1"; sha256="0jzqkgs81xf3wgw8mx6mgvy2sgriakbhzbiizmbk24q177dw09bx"; depends=[ggplot2 Matrix Rcpp RcppArmadillo RcppProgress testthat]; }; + largeVis = derive2 { name="largeVis"; version="0.2.1.1"; sha256="14jgfykvawcqmb94zwpss246ljbwf4qdgmpwwfsnplrxs7agycb5"; depends=[ggplot2 Matrix Rcpp RcppArmadillo RcppProgress testthat]; }; lars = derive2 { name="lars"; version="1.2"; sha256="0blj44wqrx6lmym1m9v6wkz8zxzbjax2zl6swgdczci0ixb5nx34"; depends=[]; }; lasso2 = derive2 { name="lasso2"; version="1.2-19"; sha256="0zkwjsd42a6z4gylq9xbs4z8n1v7ncwvssjnn3h4yz1icjfzzlvk"; depends=[]; }; lassopv = derive2 { name="lassopv"; version="0.1.3"; sha256="07b7n74z4jvrirf0rc0sbvz9nm2s2s22mb8y973iwpf0i7fqxq2c"; depends=[lars]; }; @@ -7480,25 +7639,26 @@ in with self; { lattice = derive2 { name="lattice"; version="0.20-35"; sha256="0pcnmaz3lr62ly0dcy5hnnqxshc4yqd43hrvlz3almgc9l7sna88"; depends=[]; }; latticeDensity = derive2 { name="latticeDensity"; version="1.0.7"; sha256="1y33p8hfmpzn8zl4a6zxg1q3zx912nhqlilca6kl5q156zi0sv3d"; depends=[spam spatstat spdep splancs]; }; latticeExtra = derive2 { name="latticeExtra"; version="0.6-28"; sha256="1hkyqsa7klk5glj9y1hg3rxr5qilqw8h0017zc4c3nps7lr9a1kq"; depends=[lattice RColorBrewer]; }; - lava = derive2 { name="lava"; version="1.5.1"; sha256="1vcm04h9i39gmf2prl5d4j4il4gs6skzr6y2fvl1vn4hklna87f4"; depends=[numDeriv survival]; }; + lava = derive2 { name="lava"; version="1.6"; sha256="02xf5d968raz9gnq5ywy04wz29xpdyca1hm79vbbg1mcxvzdl1dz"; depends=[numDeriv SQUAREM survival]; }; lava_tobit = derive2 { name="lava.tobit"; version="0.5"; sha256="15dlcjgnvrpdxymcwf4rvk72ssr650dy1ayp50zlrp2va0p6h4kw"; depends=[lava mets mvtnorm survival]; }; + lavaSearch2 = derive2 { name="lavaSearch2"; version="1.1.0"; sha256="1nmzj4yfgas6a9wss34ckd55gajxmd9a0fk8lmpxc2130hlr4ld8"; depends=[ggplot2 lava MASS Matrix multcomp mvtnorm nlme reshape2 sandwich]; }; lavaan = derive2 { name="lavaan"; version="0.5-23.1097"; sha256="11wxzjg09q5wzvbp1lhi9sjnp4rrjpdxnmq3zf8npx08iwkw79ws"; depends=[MASS mnormt numDeriv pbivnorm quadprog]; }; lavaan_shiny = derive2 { name="lavaan.shiny"; version="1.2"; sha256="0qgswdpxb5af0l3v70sg0jrgsdwr88gz6zzwbk3pw5x6qnvnwb6r"; depends=[lavaan psych semPlot shiny shinyAce]; }; lavaan_survey = derive2 { name="lavaan.survey"; version="1.1.3.1"; sha256="133hpy8s00y6jzwwzl9brdh70w26jycdm3n1c6bcryghwh3ai4xr"; depends=[lavaan MASS survey]; }; - lavaanPlot = derive2 { name="lavaanPlot"; version="0.1.0"; sha256="13m4rsh0nbqfnyasbrf3bw844jg1l7bqd2drckrqwss2h7ks029q"; depends=[DiagrammeR lavaan]; }; + lavaanPlot = derive2 { name="lavaanPlot"; version="0.3.0"; sha256="12j6r98p4ghcnk813s2z9r1mlwzkp6jyxjllk5nl554h5s5jg92i"; depends=[DiagrammeR lavaan]; }; lawn = derive2 { name="lawn"; version="0.4.2"; sha256="17nj88n5xzhjkwm0hi8g9h5a3nclvkq3k1pv3690ph14g4l9lgcj"; depends=[jsonlite magrittr V8]; }; lawstat = derive2 { name="lawstat"; version="3.2"; sha256="03ppzyx3x6vx1n2k5l8gl9j2q2mnqa1im5smxnrlncan7yzjy7sf"; depends=[Kendall mvtnorm VGAM]; }; lazy = derive2 { name="lazy"; version="1.2-15"; sha256="1pdqgvn0qpfg5hcg5159ccf5qj2nd1ibai9p85rwjpddfynk6jks"; depends=[]; }; lazyData = derive2 { name="lazyData"; version="1.1.0"; sha256="0mbmmx6dh8ph4lrx1b4gxbwz3jwxv4nqi0xvfzpzrm3bwbsjc634"; depends=[]; }; - lazyWeave = derive2 { name="lazyWeave"; version="3.0.1"; sha256="02c3z479y6xxng2x6vp6m0rvf3jsb9n26h00l93djxads8717i1x"; depends=[Hmisc]; }; + lazyWeave = derive2 { name="lazyWeave"; version="3.0.2"; sha256="1a7l0rgkp3xq2s6bikciq778fwyr282baa6jk9ip4a71s931p2ag"; depends=[Hmisc labelVector]; }; lazyeval = derive2 { name="lazyeval"; version="0.2.1"; sha256="0q9zx78ncy2ffzrf9sh053069kd3w1xn1ss3gsbyf3y4jhza9cw3"; depends=[]; }; lazyrmd = derive2 { name="lazyrmd"; version="0.2.0"; sha256="0ahm1wspvm625lx7y2zz05bvv66rlswphs84vpkcqb0dqfcn3s48"; depends=[digest htmltools htmlwidgets knitr rmarkdown]; }; lazysql = derive2 { name="lazysql"; version="0.1.3"; sha256="18vff80rl8ckjwfqi9dhzs1q35a1wrxvynidji6dy2kvvk38xnpa"; depends=[checkmate magrittr plyr]; }; - lba = derive2 { name="lba"; version="2.4.3"; sha256="0q83abkdwxrj4x17wrx0zcmv2z8rzji0qzz8psvjx1vkcxma3ix7"; depends=[alabama MASS plotrix rgl scatterplot3d]; }; + lba = derive2 { name="lba"; version="2.4.4"; sha256="0izqndm992zv3sg8v5lpnxbdbxhpxl6hq3bf6xgq3pnw8vl3f6nb"; depends=[alabama MASS plotrix rgl scatterplot3d]; }; lbfgs = derive2 { name="lbfgs"; version="1.2.1"; sha256="0p99g4f3f63vhsw0s1m0y241is9lfqma86p26pvja1szlapz3jf5"; depends=[Rcpp]; }; lbfgsb3 = derive2 { name="lbfgsb3"; version="2015-2.13"; sha256="1jpy0j52w8kc8qnwcavjp3smvdwm1qgmswa9jyljpf72ln237vqw"; depends=[numDeriv]; }; lbiassurv = derive2 { name="lbiassurv"; version="1.1"; sha256="1i6l3y4rasqpqka7j39qjx22wjbilgc9pkp05an52aysfvfxy193"; depends=[actuar]; }; - lbreg = derive2 { name="lbreg"; version="1.1"; sha256="13gzjkrnsdkxzinfzb0fvpijif8n66xxjmwfqpg99hgc13kn9y36"; depends=[MASS]; }; + lbreg = derive2 { name="lbreg"; version="1.2"; sha256="0wcw5w07fgmxwzmamf380l8vxw9fnxhbrhcwwfy6x87xby3bzr1b"; depends=[MASS]; }; lcda = derive2 { name="lcda"; version="0.3"; sha256="1ximsyn6qw2gfn7b1hdpbjs6h6nk7hrignlii0np1lbf0k8l4xxl"; depends=[poLCA]; }; lclGWAS = derive2 { name="lclGWAS"; version="1.0.3"; sha256="03b6ijqvyirv96hc3dsqf4f0zzqlmq5451mcb14d2mw3s6xy1vmq"; depends=[BH Rcpp]; }; lcmm = derive2 { name="lcmm"; version="1.7.8"; sha256="180xfx842sic5qnfr0zh2h4345zkzlf123pdw4q6gd0mi5smwwc7"; depends=[survival]; }; @@ -7521,7 +7681,7 @@ in with self; { leaflet = derive2 { name="leaflet"; version="1.1.0"; sha256="05faikqdlbsj9lvl1lvhmagys71597jvgah8b9f1fqhgyj0bwx7l"; depends=[base64enc crosstalk htmltools htmlwidgets magrittr markdown png raster RColorBrewer scales sp viridis]; }; leaflet_esri = derive2 { name="leaflet.esri"; version="0.2"; sha256="18y3hzbn4apn209rww8hk4mkx5ix6b6z01ydr31d39bqlgg6n7zf"; depends=[htmltools htmlwidgets leaflet leaflet_extras magrittr shiny]; }; leaflet_extras = derive2 { name="leaflet.extras"; version="0.2"; sha256="1baxcgcxizyf05w8gb5zjmvrsbrhpwvrxrblcv5vpy4vk73921v1"; depends=[htmltools htmlwidgets leaflet magrittr shiny stringr]; }; - leaflet_minicharts = derive2 { name="leaflet.minicharts"; version="0.5.1"; sha256="037x7ajdwshhmjf5cr4ha5bw1cc53cbczdc3ybdl4kp2i07gwrsq"; depends=[htmltools leaflet]; }; + leaflet_minicharts = derive2 { name="leaflet.minicharts"; version="0.5.2"; sha256="028nw9nh4q3lkw9kr4lgs78wnm79ynkjx7f215ch42183nfzlypi"; depends=[htmltools leaflet]; }; leafletCN = derive2 { name="leafletCN"; version="0.2.1"; sha256="1rg39n4bjacwss9nbdnz8y2zh8hxlc7a5ygndhjbmzajnbxfh09b"; depends=[htmltools jsonlite leaflet magrittr rgeos sp]; }; leafletR = derive2 { name="leafletR"; version="0.4-0"; sha256="0j1i971dl3smq8rcsa5s4rfmmk936k2q6xa4hppfzwhrxs3xkkkx"; depends=[brew jsonlite]; }; leapp = derive2 { name="leapp"; version="1.2"; sha256="1yiqzmhgl5f3zwpcc5sz3yqrvp8p6r4w2ffdfyirirayqc96ar17"; depends=[corpcor MASS sva]; }; @@ -7534,41 +7694,43 @@ in with self; { learnstats = derive2 { name="learnstats"; version="0.1.1"; sha256="1sa064cr7ykl4s1ssdfmb3v1sjrnkbwdh04hmwwd9b3x0llsi9vv"; depends=[ggplot2 Rcmdr shiny]; }; lefse = derive2 { name="lefse"; version="0.1"; sha256="1zdmjxr5xa5p3miw79mhsswsh289hgzfmn3mpj1lyzal1qgw1h5m"; depends=[ape fBasics geiger picante SDMTools vegan]; }; leiv = derive2 { name="leiv"; version="2.0-7"; sha256="15ay50886xx9k298npyksfpva8pck7fhqa40h9n3d7fzvqm5h1jp"; depends=[]; }; - lemon = derive2 { name="lemon"; version="0.3.1"; sha256="0p0hvw0ndqcxcg8sqwk1kfrlksp985vd4jpkww7ijmw6kmwl9mwy"; depends=[ggplot2 gridExtra gtable knitr lattice RCurl]; }; + lemon = derive2 { name="lemon"; version="0.3.3"; sha256="0jxcyplr69a3rganqc02ry57xj7is7dylsh9kvsy6kwnji6bvdib"; depends=[ggplot2 gridExtra gtable knitr lattice]; }; lero_lero = derive2 { name="lero.lero"; version="0.1"; sha256="1jndsgy48fn085ilkh8dfc3w76kfnfj0x70d1m3h59zxi3x9lb82"; depends=[stringr]; }; - lessR = derive2 { name="lessR"; version="3.6.6"; sha256="1i02i9lzgx8rf5x7pcp1vxvsgdl9jdnldj7q7qg22blaphdbl7qb"; depends=[ellipse foreign lattice latticeExtra leaps png readxl robustbase sas7bdat triangle]; }; + lessR = derive2 { name="lessR"; version="3.7.0"; sha256="14zzm7dsjwl94bcnzrkf8bk83nxsini11s5l0pia31xnm6yl89ln"; depends=[colorspace ellipse foreign lattice latticeExtra leaps png readxl robustbase sas7bdat triangle]; }; lestat = derive2 { name="lestat"; version="1.8"; sha256="12w3s5yr9lsnjkr3nsay5sm4p241y4xz0s3ir56kxjqw23g6m80v"; depends=[MASS]; }; - letsR = derive2 { name="letsR"; version="3.0"; sha256="1mm0d7v29d594w2xxv6h1k6dsav2cs31hi64lyxjar1bi4snp6hj"; depends=[fields geosphere maps maptools raster rgdal rgeos sp XML]; }; + letsR = derive2 { name="letsR"; version="3.1"; sha256="0wyqqq7w21k87md3pwsz3kdaws345fdhh2xgavwiiywalg0gvxxx"; depends=[fields geosphere maps maptools raster rgdal rgeos sp XML]; }; lettercase = derive2 { name="lettercase"; version="0.13.1"; sha256="0s2s42v6a3mlz6084sk5wcbap3czgbd53f9p64pxwd1yfj18lbyx"; depends=[stringr]; }; - lexRankr = derive2 { name="lexRankr"; version="0.4.1"; sha256="09pqpa0ps7j3s86d9njfa2qpgiadlhz96pwvgdiad8ninwk1j8b0"; depends=[dplyr igraph magrittr Rcpp SnowballC stringr tidyr tm]; }; - lexicon = derive2 { name="lexicon"; version="0.4.1"; sha256="122qvglwn2pi4zzd7cl2pqwaabsg4w7cbp4vf5gn5wnlm3rc2xd3"; depends=[data_table syuzhet]; }; + lexRankr = derive2 { name="lexRankr"; version="0.5.0"; sha256="1l0p4qg6lcpp1f2n6mh1glvxzy3bis0c1ra8x9z5v26x31wmwq68"; depends=[igraph Rcpp SnowballC]; }; + lexicon = derive2 { name="lexicon"; version="0.7.4"; sha256="1f2n90xdpbxk6ffzzlib7fxxswwkfrpf404vzx85s016529dy42m"; depends=[data_table syuzhet]; }; lexiconPT = derive2 { name="lexiconPT"; version="0.1.0"; sha256="0w53gnr29nzc1ib54rnxdycs0c5f7vpv586qmvxxzy4ar16kisaq"; depends=[]; }; lfactors = derive2 { name="lfactors"; version="1.0.1"; sha256="13vjafbss0860fi4qcf23g3cjs9dlr2k5f3majbnyvhwsbfs7cla"; depends=[]; }; lfda = derive2 { name="lfda"; version="1.1.2"; sha256="0y59iigcpmyrmsiwrpv5agja6vz3wxmxd9sl5hbf1ybm4d0lyky4"; depends=[plyr rARPACK]; }; - lfe = derive2 { name="lfe"; version="2.5-1998"; sha256="0i1vs9m8a9dadansczwg7jbah73bnxvidrld9inf8xyi8x15265z"; depends=[Formula Matrix sandwich xtable]; }; + lfe = derive2 { name="lfe"; version="2.6-2291"; sha256="1hdzq85y1nxrinikf308mvdmyw883bfzbamr27ffdphlk403ry70"; depends=[Formula Matrix sandwich xtable]; }; lfl = derive2 { name="lfl"; version="1.4"; sha256="09ni0n7xqn3qw9jjh24j679cyzgf0cxxw535ap4z44jjk29bqngw"; depends=[e1071 foreach forecast plyr Rcpp tseries zoo]; }; lfstat = derive2 { name="lfstat"; version="0.9.4"; sha256="0lm9fyw45kdkkjldkmagykn9p3l3jlw2ky3h00f7j6rqkizjm6r0"; depends=[dygraphs lattice latticeExtra lmom lmomRFA plyr xts zoo]; }; + lg = derive2 { name="lg"; version="0.1.0"; sha256="0gaid5aihc9dk3igbm8jhsspl1k4k3prqvn7j2vsm92jc7m00iyw"; depends=[ggplot2 ks localgauss logspline mvtnorm]; }; lga = derive2 { name="lga"; version="1.1-1"; sha256="1nkvar9lmdvsc3c21xmrnpn0haqk03jwvc9zfxvk5nwi4m9457lg"; depends=[boot lattice]; }; lgarch = derive2 { name="lgarch"; version="0.6-2"; sha256="05xksc4d6dbf5ls4lf2gpk9xyi99fikr7dva88b84rfgads1yhrh"; depends=[zoo]; }; lgcp = derive2 { name="lgcp"; version="1.4"; sha256="10gnfqq5vx18w6f52fliyfnrjmyns9q5q59pn2m82q2fqwaz26d8"; depends=[fields iterators maptools Matrix ncdf4 RandomFields raster rgeos rpanel sp spatstat spatstat_utils]; }; lgtdl = derive2 { name="lgtdl"; version="1.1.5"; sha256="1sixq56d2px36q0xq3kl0zwj2yzm3q8fhgqjvmajcdd5jl8l7130"; depends=[]; }; lhmixr = derive2 { name="lhmixr"; version="0.1.0"; sha256="1c4ydgq1z2y0xk8xqdsim6xvgxdbl3gglfk5kcr9k4m01arvv0rf"; depends=[]; }; - lhs = derive2 { name="lhs"; version="0.14"; sha256="1qnr3s9511nq3xqdbngllmw3mvnnpblma5dafyghxlpvydc2l481"; depends=[]; }; + lhs = derive2 { name="lhs"; version="0.16"; sha256="09clh386i5iig8x36lx02p01zqq0kb9hzvw5slv1ggmjnp1rklcw"; depends=[]; }; libamtrack = derive2 { name="libamtrack"; version="0.6.3"; sha256="0pdwrz19q1yls0rgr4579f31j86awizx3j31h7vdh6y70ngpmb82"; depends=[]; }; - libcoin = derive2 { name="libcoin"; version="0.9-3"; sha256="1gmgppc5vf11zmsbyayljijd9n3n9j0ns1hia0x7m5jm6nyjxgql"; depends=[mvtnorm]; }; - libsoc = derive2 { name="libsoc"; version="0.5"; sha256="0p01mcwnkb4g3dq0mx1gbwfbznp4b2dmhs8k8wmnh7wll16v9i6z"; depends=[]; }; + libcoin = derive2 { name="libcoin"; version="1.0-1"; sha256="1i38v0pq5snx9clhgfiymk6lq87h41pajhp2dvin30snnq0py6qq"; depends=[mvtnorm]; }; + librarysnapshot = derive2 { name="librarysnapshot"; version="0.1.2"; sha256="0v4x564zpm58kxs5n84bi6mcjhbzjg6a2lc30vsc8kbm3qy0nq38"; depends=[]; }; + libsoc = derive2 { name="libsoc"; version="0.6.4"; sha256="1hdnqgnvzm5116gphxa55k2bc3ksr607px2s2yg1ilmmxdghdccw"; depends=[]; }; libstableR = derive2 { name="libstableR"; version="1.0"; sha256="0qk70rl76lz2izgp2c1asx0yvi8xgfq1yg579kcygxk4pnxjdwv4"; depends=[Rcpp]; }; - lidR = derive2 { name="lidR"; version="1.3.1"; sha256="162gf587rhpfx29kxlq21axhvjxkj9bx5zryl3vfzad9309n0an9"; depends=[data_table gdalUtils geometry gstat lazyeval magrittr mapedit mapview memoise raster Rcpp RcppProgress rgeos rgl rlas settings sp stringr]; }; - lifecontingencies = derive2 { name="lifecontingencies"; version="1.3.1"; sha256="09hk5rbcvsvx7axh2kimb71rm9zwmna20g839ddblzsmknjrjrhl"; depends=[markovchain Rcpp]; }; + lidR = derive2 { name="lidR"; version="1.4.1"; sha256="01nw6i7ddk99zayblqhxsnx2cy29ippii9vdqahffv91644iqqb1"; depends=[data_table future gdalUtils geometry gstat lazyeval magrittr mapedit mapview memoise RANN raster Rcpp RcppProgress rgeos rgl rlas settings sp stringr]; }; + lifecontingencies = derive2 { name="lifecontingencies"; version="1.3.2"; sha256="012pfiz4l8xrwrjlzwfc0vxw1wpw2n2f2vj39mlpmg5aswg4mm8k"; depends=[markovchain Rcpp]; }; lifecourse = derive2 { name="lifecourse"; version="2.0"; sha256="1m8ihqvzhzpq2m2pdvh37bpq9pdbj23r3y0jkl3q8farh3qj473d"; depends=[TraMineR]; }; lifelogr = derive2 { name="lifelogr"; version="0.1.0"; sha256="1wygvw61ygpww0kahxhmjdncwg4zc2cshs0brzw18nfqaj8vpfav"; depends=[dplyr fitbitScraper ggplot2 lazyeval lubridate modelr plyr R6 shiny stringr tibble tidyr]; }; lift = derive2 { name="lift"; version="0.0.2"; sha256="0ynsyl6lw7z7bvwzk2idgxzzqji5ffnnc3bll9h4gwdw666g7fln"; depends=[]; }; liftLRD = derive2 { name="liftLRD"; version="1.0-6"; sha256="1mnrhdig7kb7g6ffw7x9l8bpn66y7bh3n6ds5r2gb3nplnidi45y"; depends=[adlift nlt]; }; - liftr = derive2 { name="liftr"; version="0.7"; sha256="1gyjhb7lp65jaamij2xxyyqryz69b5r6s7b7h8g4qj8w6jqbpsay"; depends=[knitr rmarkdown rstudioapi stringr yaml]; }; + liftr = derive2 { name="liftr"; version="0.8"; sha256="1z5n7xfmaymkz9pl6pbss351dy626nd0m1wn4jpbxvx74fw99a1y"; depends=[knitr rmarkdown rstudioapi stringr yaml]; }; lightsout = derive2 { name="lightsout"; version="0.3"; sha256="0ypniqf9wk35dd9j57wd7gxchr5hy25fwhmkndz2z8b9ajhm3c9b"; depends=[magrittr shiny shinyjs]; }; - likeLTD = derive2 { name="likeLTD"; version="6.2.1"; sha256="1b5rg1nijc4vsl7xabq35ini84rpnd1yrxsk1vr7wd57yac25mmk"; depends=[DEoptim gdata ggplot2 gtools rtf]; }; + likeLTD = derive2 { name="likeLTD"; version="6.3.0"; sha256="1mjf4667xd9pf2684d7vqaj54l5s9pgljn4vkfp32wzbfknq6y8r"; depends=[DEoptim gdata ggplot2 gtools rtf]; }; likelihood = derive2 { name="likelihood"; version="1.7"; sha256="0q8lvwzlniijyzsznb3ys4mv1cqy7ibj9nc3wgyb4rf8676k4f8v"; depends=[nlme]; }; - likelihoodAsy = derive2 { name="likelihoodAsy"; version="0.45"; sha256="0sl0q6w49l89i6s80scsr5lrr8jgdd0788i4b87w985zaxjqrh03"; depends=[alabama cond nleqslv pracma Rsolnp]; }; + likelihoodAsy = derive2 { name="likelihoodAsy"; version="0.50"; sha256="009alsxsv9fjpihp3zl0a94y6cvr49nh21skba64lzz9fypm9j8l"; depends=[alabama cond digest nleqslv pracma Rsolnp]; }; likelihoodExplore = derive2 { name="likelihoodExplore"; version="0.1.0"; sha256="13cnql7pbx8qq1j3cfb3lkzzf2k55shpfa0jd00z30ys6imxzcfn"; depends=[lazyeval plyr]; }; likert = derive2 { name="likert"; version="1.3.5"; sha256="0c4irxs7pp1z8nj4s8cq23daw4h94n3h7x4f6q1d85614qcl9l3p"; depends=[ggplot2 gridExtra plyr psych reshape2 xtable]; }; limSolve = derive2 { name="limSolve"; version="1.5.5.3"; sha256="1ll6ir42h3g2fzf0wqai213bm82gpwjj2hfma2np3mz024sc09rg"; depends=[lpSolve MASS quadprog]; }; @@ -7581,8 +7743,8 @@ in with self; { linear_tools = derive2 { name="linear.tools"; version="1.3.0"; sha256="14lp3gifzbid82lkr7rdqajz2abp8m7y8irpwx6s8w66djjfckda"; depends=[ggplot2 magrittr plyr pryr scales stringr]; }; linemap = derive2 { name="linemap"; version="0.1.0"; sha256="0qkbmpfr742xbs3xn5ppx6q0prwrr9mk1c1mv050cm47dm7jcs6l"; depends=[sf]; }; lineup = derive2 { name="lineup"; version="0.37-6"; sha256="1xyvw00lwnx7j3cgk4aw69lam6ndjxx3wj14h4jpx1xn8l3w7652"; depends=[class qtl]; }; - lingtypology = derive2 { name="lingtypology"; version="1.0.8"; sha256="0a2zpm40b9h78pcvx08kvsiks2hqngs4530ikmgqg30gg3mwbvqq"; depends=[leaflet leaflet_minicharts magrittr MASS rowr sp stringdist]; }; - link2GI = derive2 { name="link2GI"; version="0.1-0"; sha256="1i16yf387izv8vn0z8f7wgk02hld83lhfb5c263mn1v3q5zj9kki"; depends=[gdalUtils raster rgdal rgrass7 sf sp]; }; + lingtypology = derive2 { name="lingtypology"; version="1.0.11"; sha256="1cn1q7n1kf4llhzxq0ixrd8n8izksrxczr4h6q7923imjiaclv2n"; depends=[leaflet leaflet_minicharts magrittr MASS rowr sp stringdist]; }; + link2GI = derive2 { name="link2GI"; version="0.3-0"; sha256="0jzk1p9cygcw0xz9hqfzx74acl4ymn3jmcjj0dxrmknsvfdzcl2d"; depends=[gdalUtils raster rgdal rgrass7 RSAGA sf sp]; }; linkR = derive2 { name="linkR"; version="1.1.1"; sha256="1748r7s5g0gvsmghrb7l5lmdbzb9f4vkbgj51v308jr64r1k7l93"; depends=[svgViewR]; }; linkcomm = derive2 { name="linkcomm"; version="1.0-11"; sha256="1w5sfmzvrk30fr161pk0cy5nj8kasqm6hqgyafq6r280b5s272cb"; depends=[dynamicTreeCut igraph RColorBrewer]; }; linkim = derive2 { name="linkim"; version="0.1"; sha256="0yvyid9x59ias8h436a202hd2kmqvn8k1zcrgja2l4z2pzcvfn91"; depends=[]; }; @@ -7592,18 +7754,18 @@ in with self; { lintr = derive2 { name="lintr"; version="1.0.2"; sha256="14l6fi2mdc2swi4xw865q63yngk2b5k553qbyvnhmwq2w4pv07pn"; depends=[codetools crayon digest httr igraph jsonlite knitr rex rstudioapi stringdist testthat]; }; liqueueR = derive2 { name="liqueueR"; version="0.0.1"; sha256="0rpjib0dz39la63gy9bw9gmdfq2fcx40y4y4wcb6ky41qcjdp1nd"; depends=[itertools]; }; liquidSVM = derive2 { name="liquidSVM"; version="1.2.1"; sha256="0nw8n4qg2jijbnlza15ifzqsl4pj7gjzi4nd71zp7h0aw5mnp80x"; depends=[]; }; - lira = derive2 { name="lira"; version="2.0.0"; sha256="1b756hci427fckr5vfr092nb9bmc5c47j3szrscjsiysm0j7817h"; depends=[coda rjags]; }; + lira = derive2 { name="lira"; version="2.0.1"; sha256="10bjmapnlw5z5cnbdpkwisvjkmk7zi9xqrvgmb5psj317zcxfc2p"; depends=[coda rjags]; }; liso = derive2 { name="liso"; version="0.2"; sha256="072l7ac1fbkh8baiiwx2psiv1sd7h8ggmgk5xkzml069ihhldj5i"; depends=[Iso MASS]; }; lisp = derive2 { name="lisp"; version="0.1"; sha256="025sq46277q9i21189cbmx5dnrh5wfshc5k6la1wjilhr1iqf6nj"; depends=[]; }; lisrelToR = derive2 { name="lisrelToR"; version="0.1.4"; sha256="0zicq0z3hhixan1p1apybnf3v5s6v6ysll4pcz8ivygwr2swv3p5"; depends=[]; }; list = derive2 { name="list"; version="8.3"; sha256="1wffh7xmhdf4hqbpz4ij0759zk0y0zsm160kzfcr2n8s9wdgm5gj"; depends=[coda corpcor gamlss_dist magic MASS mvtnorm quadprog sandwich VGAM]; }; listWithDefaults = derive2 { name="listWithDefaults"; version="1.2.0"; sha256="1rv9jq9zlr5dm08mimba6ni2p5vkfybrgrqk1alm7y6mqpx56byp"; depends=[assertthat]; }; listdtr = derive2 { name="listdtr"; version="1.0"; sha256="08drps03nndpdxswyv8bjm1bcckjav5pjj7fdx3dzyn0v4dfy619"; depends=[ggplot2]; }; - listenv = derive2 { name="listenv"; version="0.6.0"; sha256="0kyq90mf7wv9qgw3s81iv0b8ah0ncc5kv15r7fv6ggdq4f0z0dx7"; depends=[]; }; + listenv = derive2 { name="listenv"; version="0.7.0"; sha256="0ma5jsri2zqkrlsm9nqpikl7imbwfy1glsmk13mblw0q245h49k1"; depends=[]; }; listless = derive2 { name="listless"; version="0.0-2"; sha256="1gr6l4vih7j28kg2mj1xj2yhlpwjc4p894vsxri25vq0r9kgcdym"; depends=[magrittr tidyr]; }; listviewer = derive2 { name="listviewer"; version="1.4.0"; sha256="1273vk8pk393ciwahvpmdh9z4xdlhw3a7mlm7jsqxqnsrc6jrz3x"; depends=[htmltools htmlwidgets shiny]; }; liteq = derive2 { name="liteq"; version="1.0.1"; sha256="080ljgb2qsfmyppnlp9acmskgq94pmdbbgbhygqkxvzda5bbas8h"; depends=[assertthat DBI rappdirs RSQLite]; }; - littler = derive2 { name="littler"; version="0.3.2"; sha256="0anwlxyj82xgrccb3pf6glrkqbkw1871hj4b1qrkmd5ss2f3xq9j"; depends=[]; }; + littler = derive2 { name="littler"; version="0.3.3"; sha256="1cbsnm4ffzld93b9q8g6g6h6yskjfwa8j1xani5682ipb7r290x7"; depends=[]; }; liureg = derive2 { name="liureg"; version="1.1.1"; sha256="11cybb1i3a0na3yadzwmn1hlglqk0zdzxj0n07ygsxrdq7sxbpnj"; depends=[]; }; livechatR = derive2 { name="livechatR"; version="0.1.0"; sha256="1k0z6q3s9iw962m1lwlx45p95flzl5jg1xh6ng426v9jh1yyrbb2"; depends=[data_table dplyr jsonlite magrittr purrr]; }; ljr = derive2 { name="ljr"; version="1.4-0"; sha256="0jby94ml8w6pwnxbmv6qfjww2myvvnn9vrmlqpdh71dhgp3z35py"; depends=[]; }; @@ -7615,16 +7777,15 @@ in with self; { lm_br = derive2 { name="lm.br"; version="2.9.3"; sha256="1xadz0rygm58igk0ig0w45132gnsvjxvwqzca4m6v6i6lz9x55pf"; depends=[Rcpp]; }; lmPerm = derive2 { name="lmPerm"; version="2.1.0"; sha256="1ss2hcfxqvfq4n6hypv7jp0n0apby9payxzaswaysr5368lkidn3"; depends=[]; }; lmSupport = derive2 { name="lmSupport"; version="2.9.11"; sha256="1yvckfahw3kq0r28ggrml7qhgm4ib5ihd971zxg62li4inrkri6b"; depends=[AICcmodavg car gplots gvlma lme4 pbkrtest psych pwr]; }; - lme4 = derive2 { name="lme4"; version="1.1-14"; sha256="1vars93604q7kyz6y1f8f886l05jkgj8bs78033l2czypvzki5la"; depends=[lattice MASS Matrix minqa nlme nloptr Rcpp RcppEigen]; }; + lme4 = derive2 { name="lme4"; version="1.1-15"; sha256="0sc6rvhiizxxpkdc3wps200wg3pqc0d89crn29lzm75fk8qdd7vx"; depends=[lattice MASS Matrix minqa nlme nloptr Rcpp RcppEigen]; }; lmeNB = derive2 { name="lmeNB"; version="1.3"; sha256="03khn9wgjbz34sx0p5b9wd3mhbknw8qyvyd5pvllmjipnir63d3q"; depends=[lmeNBBayes numDeriv statmod]; }; lmeNBBayes = derive2 { name="lmeNBBayes"; version="1.3.1"; sha256="13shfsh9x6151xy8gicb25sind90imrwclnmfj96b76p5dvhzabm"; depends=[]; }; lmeSplines = derive2 { name="lmeSplines"; version="1.1-10"; sha256="0fy6hspk7rqqkzv0czvvs8r4ishvs7zsf4ykvia65nj26w7yhyia"; depends=[nlme]; }; - lmeVarComp = derive2 { name="lmeVarComp"; version="1.0"; sha256="17zrl33h4lcd8lpdv3d12h5afj8nxr2lyw6699zq4fds2chbq66l"; depends=[]; }; lmec = derive2 { name="lmec"; version="1.0"; sha256="09shj01h2dl5lh7ch0wayr7qyhlmk0prv3p1vfgy91sn0wpbqlxr"; depends=[mvtnorm]; }; lmem_gwaser = derive2 { name="lmem.gwaser"; version="0.1.0"; sha256="0i315plqq1c8d7nvzk7jj9b3n4pgy27673pgdbii4c5bccwm12vn"; depends=[fdrtool genetics lattice LDheatmap lme4 pastecs qtl stringr]; }; lmem_qtler = derive2 { name="lmem.qtler"; version="0.1.1"; sha256="0qbllj66y294n1m8dsyrnwyvzscbzg8mb2dmjyghcrfaz925vkin"; depends=[lattice lme4 pastecs qtl stringr]; }; lmenssp = derive2 { name="lmenssp"; version="1.2"; sha256="1vc90x3y1vzmzblc15kqar3nd3c3p8p9nvmpk0ib52n0qv5pr6wz"; depends=[geoR MASS mvtnorm nlme]; }; - lmerTest = derive2 { name="lmerTest"; version="2.0-33"; sha256="1r4bwxq36hn41hwjph2nrn4jhh0y2kwc746374ng5jd480gkgl8m"; depends=[ggplot2 Hmisc lme4 MASS Matrix plyr]; }; + lmerTest = derive2 { name="lmerTest"; version="2.0-36"; sha256="1ja56y45fdxa5xqwzng4rk3vjcfjvmchfcpdy08lv9dzkp71g1qp"; depends=[ggplot2 Hmisc lme4 MASS Matrix plyr]; }; lmeresampler = derive2 { name="lmeresampler"; version="0.1.0"; sha256="00v3qg5vyjjb0pcbrknzxy80kkwsypkhwkv3nsck5rscaf86y3aq"; depends=[boot dplyr Matrix nlmeU plyr RLRsim]; }; lmf = derive2 { name="lmf"; version="1.2"; sha256="1xqlqmjl7wf5b2s2a1k1ara21v74b3wvwl4mhbj9dkdb0jcrgfva"; depends=[]; }; lmfor = derive2 { name="lmfor"; version="1.2"; sha256="1lad1sfrf6lsksix4nn2c2dc5fx0rfm4kdhvbmqf9dc55f98rla8"; depends=[MASS nlme]; }; @@ -7634,14 +7795,15 @@ in with self; { lmmot = derive2 { name="lmmot"; version="0.1.4"; sha256="1a8msh9yvvd7cv1zxlxdv8arlfvxqghxzcxls23v6ifl5jf4d1p3"; depends=[MASS maxLik]; }; lmmpar = derive2 { name="lmmpar"; version="0.1.0"; sha256="1l3zjmlfjfn2wv4yayqzv6qrwaxk2sgx3hjx371b5fs54zspdj20"; depends=[bigmemory doParallel MASS matrixcalc mnormt plyr]; }; lmms = derive2 { name="lmms"; version="1.3.3"; sha256="1gralhk9plmpmdya7cfzgzwzr8ab47pz4f76kvlp03sp5gcy4063"; depends=[gdata ggplot2 gplots gridExtra lmeSplines nlme reshape2]; }; - lmodel2 = derive2 { name="lmodel2"; version="1.7-2"; sha256="0dyzxflr82k7ns824zlycj502jx3qmgrck125im2k2da34ir3m3q"; depends=[]; }; + lmodel2 = derive2 { name="lmodel2"; version="1.7-3"; sha256="1fiin2nkffbihz1s8ixmw9lgf8mn3j9krr8iiflizk10mdv54hnb"; depends=[]; }; lmom = derive2 { name="lmom"; version="2.6"; sha256="0wxlclzypg6dnvk09k26pdgn3nijl06xsa9rny5l03xzar01mz5s"; depends=[]; }; + lmomPi = derive2 { name="lmomPi"; version="0.5.0"; sha256="07ggfzgvhc6kkqs8bbs6z01rbhgb0ki2y4li6r0nkiby1wcpx0py"; depends=[lmom stringr]; }; lmomRFA = derive2 { name="lmomRFA"; version="3.1"; sha256="1gq5sjdywz1jbsshrh350zad7iifml2yj8an5xa63ghxiskrxscx"; depends=[lmom]; }; lmomco = derive2 { name="lmomco"; version="2.2.9"; sha256="17dgzvf1rrxw3xplwvsy6dsx31b6k6f17g20zbmrh6xv3fnfb86r"; depends=[goftest Lmoments MASS]; }; - lmridge = derive2 { name="lmridge"; version="1.0"; sha256="07zchmdcyz8agrs9q2ydcgicz3sxg893vv4rsynlpgyk2z5xnnjf"; depends=[]; }; + lmridge = derive2 { name="lmridge"; version="1.1"; sha256="1r4g7482iz4b7jk0gj169bj96ip2wyrff1ndkwhf0qzg6r6vqa8d"; depends=[]; }; lmtest = derive2 { name="lmtest"; version="0.9-35"; sha256="107br1l7p52wxvazs031f4h5ryply97qywg9dzrkw4ydnvqq4j9g"; depends=[zoo]; }; - lmvar = derive2 { name="lmvar"; version="1.3.0"; sha256="0iczn4r83gdsvb8hk7av3pjf3am0z7hpqdn7xqpnyby5sqga5kv9"; depends=[Matrix matrixcalc maxLik]; }; - loa = derive2 { name="loa"; version="0.2.43.1"; sha256="1vdj5y492v7xs29mxbldvavbvxai0adahqa4wx32k0828dxk5k8v"; depends=[lattice MASS mgcv plyr png RColorBrewer RgoogleMaps]; }; + lmvar = derive2 { name="lmvar"; version="1.4.0"; sha256="0pwpsdmqjlj79ybx5rw82qgkjzak941d9vvdzwipjh8n51mcvwcd"; depends=[Matrix matrixcalc maxLik]; }; + loa = derive2 { name="loa"; version="0.2.43.3"; sha256="0krrv5sicm4xvgilri8nwby6jlidx375b4sk273hxq7bhayw4hqq"; depends=[lattice MASS mgcv plyr png RColorBrewer RgoogleMaps]; }; localdepth = derive2 { name="localdepth"; version="0.5-7"; sha256="0h0y74xnhdqa7y51ljmpz7ayznppvy2ll06wfds6200lb9cxgr7k"; depends=[circular]; }; localgauss = derive2 { name="localgauss"; version="0.40"; sha256="0y0pcg2i7lr4wipxawn06hy0q11znhcn2ah6rqwnlyy8pab70pyq"; depends=[foreach MASS matrixStats]; }; localsolver = derive2 { name="localsolver"; version="2.3"; sha256="1d18rihzqf1f5j9agfp8jysll7lqk1ai23hkdqkn6wwxj442llv4"; depends=[]; }; @@ -7655,26 +7817,27 @@ in with self; { log4r = derive2 { name="log4r"; version="0.2"; sha256="07q8m7z2sxm6n25a62invf76qakxdsijfh3272spc8xrmdmyw6rj"; depends=[]; }; logOfGamma = derive2 { name="logOfGamma"; version="0.0.1"; sha256="0r7di0l646ycfmdjk8hli6b0v7qj0i8z3i8i7rwd3fsblb2q22vd"; depends=[]; }; logbin = derive2 { name="logbin"; version="2.0.3"; sha256="0jvld5lh69288g80ypvqyg0s0nip9hgd8p09b91xp11vnlap0g02"; depends=[glm2 turboEM]; }; - logconPH = derive2 { name="logconPH"; version="1.5"; sha256="05fkibgh5nzs8c4f39kzg4zyh2dfhg1k69hlx7l8p442snajsg92"; depends=[]; }; logconcens = derive2 { name="logconcens"; version="0.16-4"; sha256="11bk03kjlb747g54axmb0nayz226g41xvanbw79aij76vjbglv7y"; depends=[]; }; logcondens = derive2 { name="logcondens"; version="2.1.5"; sha256="1sq27klnphp74hq0l0460m9bb7lrl06mpgkg4qq8iciy3yy1mrkj"; depends=[ks]; }; logcondens_mode = derive2 { name="logcondens.mode"; version="1.0.1"; sha256="1i2c2prk5j863p3a3q3xnsv684igfi5czz3dib7zfjldpf0qyaq7"; depends=[distr logcondens]; }; logcondiscr = derive2 { name="logcondiscr"; version="1.0.6"; sha256="08wwxsrpflwbzgs6vb3r0f52hscxz1f4q0xabr1yqns06gir1kxd"; depends=[cobs Matrix mvtnorm]; }; logging = derive2 { name="logging"; version="0.7-103"; sha256="1sp7q217awizb6l8c9p5dix6skpq8j7w8i088x4mm0fc0qr1ba5c"; depends=[]; }; + logiBin = derive2 { name="logiBin"; version="0.1.0"; sha256="146jh5cpydpvv8g3ccrglm88zp8sam4airw521cxcfyg5v8qvdqs"; depends=[data_table doParallel foreach iterators partykit]; }; logihist = derive2 { name="logihist"; version="1.0"; sha256="1q3322rh3g31c5i80aw54pln0m1jgxmbx30cn31nlh3ijkvnpq9a"; depends=[ggplot2]; }; logistf = derive2 { name="logistf"; version="1.22"; sha256="0npwqbl8rfvn6w2y0qpkckj44mvjjccj0cn9axp2wcs03cmz0rp8"; depends=[mgcv mice]; }; logistic4p = derive2 { name="logistic4p"; version="1.5"; sha256="0h0dxyklqc95ykyril1a3d2bdnszj5l9dqbxzh2wbfmk06prvh8b"; depends=[MASS]; }; logisticPCA = derive2 { name="logisticPCA"; version="0.2"; sha256="07ikyn127ld0fjdw7x911wrswqwqpw4lbcz0iffvh6jfjkgyk341"; depends=[ggplot2]; }; logitchoice = derive2 { name="logitchoice"; version="0.9.4"; sha256="1vkw7cwp7nwrsj9ifn4gz21zbw9da5rph9lr3w466zxkzdkbldqj"; depends=[]; }; - logitnorm = derive2 { name="logitnorm"; version="0.8.34"; sha256="08jm49picrxbwr8d0c64z5gbslrliq674vr0h30gljf3r9w6s5jj"; depends=[]; }; + logitnorm = derive2 { name="logitnorm"; version="0.8.35"; sha256="0bpj3dsxqwx96ffbx8479271nbf30pfvl7914m5af8hacqlga912"; depends=[]; }; loglognorm = derive2 { name="loglognorm"; version="1.0.1"; sha256="0rhx769a5nmidpbpngs2vglsbkpgw9badz3kj3jfmpj873jfnbln"; depends=[]; }; logmult = derive2 { name="logmult"; version="0.6.5"; sha256="0ak13nfgaima6g75rxbghl7xmagfp4qshj09x1fxh2r2rcags7dk"; depends=[gnm qvcalc]; }; logspline = derive2 { name="logspline"; version="2.1.9"; sha256="1kd7ricaxbcjl6d9hx7bb5mlkr7x2h7gc8vrmfvlzxppbcghb6vw"; depends=[]; }; lokern = derive2 { name="lokern"; version="1.1-8"; sha256="1dlyvgd2i4dckd8ic3x75r4sikwalch9b2f13xp5rhkzmfzbprxq"; depends=[sfsmisc]; }; + lolR = derive2 { name="lolR"; version="1.0.1"; sha256="1lhhasbbpacqpc3d7bvw7q183czdjqc6xdlc7yafk7rnwgmpxjxz"; depends=[abind ggplot2 irlba MASS]; }; lomb = derive2 { name="lomb"; version="1.0"; sha256="06lbk7s1ilqx6xsgj628wzdwmnvbs0p03hdpx8665fhddcxh3ryy"; depends=[]; }; longCatEDA = derive2 { name="longCatEDA"; version="0.31"; sha256="0dji41lsknfwmgb2fczzm37dm97wvi45rh878w7pwlzwdh9vq8va"; depends=[]; }; longROC = derive2 { name="longROC"; version="1.0"; sha256="1fs11vqi4hy99d7shzzdvd6ic5gay6rh2027w6j0qpd04n8q88m8"; depends=[survival]; }; - longRPart2 = derive2 { name="longRPart2"; version="0.0.1"; sha256="0ml8c98gyvxy75wisphrz2ms4gbiss80vwb6j5k2mk028107amyb"; depends=[formula_tools ggplot2 MASS nlme rpart]; }; + longRPart2 = derive2 { name="longRPart2"; version="0.2.3"; sha256="1vqcsxi6c4hqrpk3ns7yhghfryin1psxl38qkz2xz8cvyn58f685"; depends=[formula_tools ggplot2 MASS nlme rpart]; }; longclust = derive2 { name="longclust"; version="1.2"; sha256="1m270fyvfz0w19p9xdv7ihy19nhrhjq2akymbp774073crznmmw0"; depends=[]; }; longitudinal = derive2 { name="longitudinal"; version="1.1.12"; sha256="1d83ws28nxi3kw5lgd5n5y7865djq7ky72fw3ddi1fkkhg1r9y6l"; depends=[corpcor]; }; longitudinalData = derive2 { name="longitudinalData"; version="2.4.1"; sha256="0lnvcfgj721bawl1ciz0jw83mfsnzkhg6jn824vr3qdm4rbib2vd"; depends=[class clv misc3d rgl]; }; @@ -7701,9 +7864,9 @@ in with self; { lpridge = derive2 { name="lpridge"; version="1.0-7"; sha256="0nkl70fwzra308bzlhjfpkxr8hpd8v1xdnah7nscxa10qlisgr2k"; depends=[]; }; lqa = derive2 { name="lqa"; version="1.0-3"; sha256="141r2cd9kybi6n9jbdsvhza8jdxxqch4z3qizvpazjy8qifng29q"; depends=[]; }; lqmm = derive2 { name="lqmm"; version="1.5.3"; sha256="1gl609irhxk7qi4x8as2xylc6iybm9jyrnm7dvb92nxl0ksp44v7"; depends=[nlme SparseGrid]; }; - lqr = derive2 { name="lqr"; version="1.5"; sha256="1rcs6p8jx86r40ys8qiz5gynkfqyg3lkv7wsv551w9c5m3s1z2gy"; depends=[ghyp spatstat]; }; + lqr = derive2 { name="lqr"; version="1.7"; sha256="110c18wc3y3nkdwjgrksw20kvvy65822njrpy4gwb100ifigw0v7"; depends=[ghyp spatstat]; }; lrequire = derive2 { name="lrequire"; version="0.1.3"; sha256="03c8h9v2xhlv7bj5jv117a27gaqaly2kdxs9zyihsm9yh9rg3d79"; depends=[]; }; - lrgs = derive2 { name="lrgs"; version="0.5.1"; sha256="1hzcmrvax03bzrljnqskmnnpsw6amnwcfygnls727369h0dbzc4a"; depends=[mvtnorm]; }; + lrgs = derive2 { name="lrgs"; version="0.5.3"; sha256="0aqz07vg3z52lq224mapwgwr9mspa7aswzdfngg6x933aqsha4gj"; depends=[mvtnorm]; }; lrmest = derive2 { name="lrmest"; version="3.0"; sha256="1yddkgza672z9y0ipgl92pg9prhmr387zsqf0qbi9k2yzfz2vvs6"; depends=[MASS psych]; }; lsa = derive2 { name="lsa"; version="0.73.1"; sha256="1af8s32hkri1hpngl9skd6s5x6vb8nqzgnkv0s38yvgsja4xm1g5"; depends=[SnowballC]; }; lsasim = derive2 { name="lsasim"; version="1.0.1"; sha256="0bwk6bv0wp30v6p55nyd1hcvwnjjddwccyy1swf6sg7lw3fy657p"; depends=[]; }; @@ -7713,7 +7876,7 @@ in with self; { lsgl = derive2 { name="lsgl"; version="1.3.6"; sha256="0zkv5xgwrnwx0w0qpzsg7krd7fdnlr3a85q64xj1wx0gd578dqq6"; depends=[BH Matrix Rcpp RcppArmadillo RcppProgress sglOptim]; }; lshorth = derive2 { name="lshorth"; version="0.1-6"; sha256="0nbjakx0zx4fg09fv26pr9dlrbvb7ybi6swg84m2kwjky8399vvx"; depends=[]; }; lsl = derive2 { name="lsl"; version="0.5.6"; sha256="1hwzklx1qp5ljc059j2hridg3caw4cgn7rbqs8xh2arzcvqdw3rb"; depends=[ggplot2 lavaan reshape2]; }; - lslx = derive2 { name="lslx"; version="0.6.0"; sha256="0in84pq3vf7jlzsb1g6xb0vjcsb8ic4msn5ika1l6k2hsh8v31mm"; depends=[ggplot2 lavaan R6 Rcpp RcppEigen]; }; + lslx = derive2 { name="lslx"; version="0.6.1"; sha256="0zl3gcxc0410zm88kdzqywrqsas7vas4w7mxs2ad6wcclf33dwb5"; depends=[ggplot2 lavaan R6 Rcpp RcppEigen]; }; lsmeans = derive2 { name="lsmeans"; version="2.27-61"; sha256="0qw4lkgaynld56ywvdyy5nqvq7c6r2v24gsy54rkcw2n4xhlnahm"; depends=[coda estimability multcomp mvtnorm nlme plyr xtable]; }; lspline = derive2 { name="lspline"; version="1.0-0"; sha256="0bc1nfpp1r5fi8rrg295k4r8pm03baqplrzwmk3sn4kdbp0apvgk"; depends=[]; }; lspls = derive2 { name="lspls"; version="0.2-1"; sha256="1g27fqhnx9db0zrxbhqr76agvxy8a5fx1bfy58j2ni76pki1y4rl"; depends=[pls]; }; @@ -7722,26 +7885,26 @@ in with self; { lss = derive2 { name="lss"; version="0.52"; sha256="1fvs8p9rhx81xfn450smnd0i1ym06ar6nwwcpl74a66pfi9a5sbp"; depends=[quantreg]; }; ltbayes = derive2 { name="ltbayes"; version="0.4"; sha256="0kv5k56hmc1m7bv5pmmmk46822szsgwqgpwydn0x56az7xn6hjk6"; depends=[mcmc MHadaptive numDeriv]; }; ltm = derive2 { name="ltm"; version="1.1-0"; sha256="1gxjz3rn5bacv7xdlinzk6rdcwragb76grjpk5wqs4shqbk0rld2"; depends=[MASS msm polycor]; }; - ltmle = derive2 { name="ltmle"; version="1.0-0"; sha256="04rqy5xi84jwzv7j9qpwp3im79dxcabsr6cvpgdhji0n884rgnzg"; depends=[Matrix matrixStats speedglm]; }; + ltmle = derive2 { name="ltmle"; version="1.0-1"; sha256="0g3nybhxz7mivqkzvlzkasc1m489s4fsi4874wvlhqg3x3mww0x9"; depends=[Matrix matrixStats speedglm]; }; ltsa = derive2 { name="ltsa"; version="1.4.6"; sha256="10wmw9r00400ng2zlysd8jqgypjclshxj83x32002j2a9cz4f186"; depends=[]; }; ltsbase = derive2 { name="ltsbase"; version="1.0.1"; sha256="16p5ln9ak3h7h0icv5jfi0a3fbw5wdqs3si69sjbn8f5qs2hz7yp"; depends=[MASS robustbase]; }; - ltsk = derive2 { name="ltsk"; version="1.0.4"; sha256="1p026ryq31iw7d8mbi4m2q43g5frj47387w8g46j50bcv11hh2zm"; depends=[fields gstat sp]; }; + ltsk = derive2 { name="ltsk"; version="1.0.5"; sha256="0x142w2l6qaqw1kmx5kix7lkadaw2kl8dqx11d091vqj2imi9wlr"; depends=[fields gstat sp]; }; ltxsparklines = derive2 { name="ltxsparklines"; version="1.1.2"; sha256="1jnygg7wm2768lrrzball8rn8f60xy4nc3a18h4d32jpnbhifj13"; depends=[]; }; - lubridate = derive2 { name="lubridate"; version="1.7.1"; sha256="0pzvazzybzvln3y676yims7whsc74g8i7kgf2nsfbxdq5943z349"; depends=[Rcpp stringr]; }; + lubridate = derive2 { name="lubridate"; version="1.7.2"; sha256="0k417a1xp5gxf77ycbnx5apzpc5d25sjm83ss7wmqpbnhnr5dcav"; depends=[Rcpp stringr]; }; luca = derive2 { name="luca"; version="1.0-5"; sha256="1jiqwibkrgga4ahz0qgpfkvrsxjqc55i2nwnm60xddb8hpb6a6qx"; depends=[genetics survival]; }; lucid = derive2 { name="lucid"; version="1.4"; sha256="1kwl9h7ynp8nhny51xskrbgc3060bawxjkdijhsjzss2hbbygwds"; depends=[nlme]; }; lucr = derive2 { name="lucr"; version="0.2.0"; sha256="0v5g72cl9fg3b3ix34bsmjwwqrnm4ivgcd5mm98c5jd8rrz1xkwq"; depends=[httr Rcpp]; }; - ludic = derive2 { name="ludic"; version="0.1.5"; sha256="03ywna9fd2ypwchwx58ccmlxjdnx7zav7pqxwrc5bh3hrfbsxl13"; depends=[fGarch landpred Matrix Rcpp RcppArmadillo]; }; + ludic = derive2 { name="ludic"; version="0.1.6"; sha256="0srs3bx9cw89mlpg8b8vcmz2gnsv729j3n23pnnxgbh2w7xf705b"; depends=[fGarch landpred Matrix Rcpp RcppArmadillo]; }; lulcc = derive2 { name="lulcc"; version="1.0.2"; sha256="1vlaidyqgx5vnf8w2y1a1jmmq7z4195avnv1mryhh414r5r1kpy0"; depends=[lattice raster rasterVis ROCR]; }; lumberjack = derive2 { name="lumberjack"; version="0.2.0"; sha256="0yn6482wrwinabys3awp0jjnzs6mnv29jjpvr980m1jm15nwva4g"; depends=[R6]; }; - lumendb = derive2 { name="lumendb"; version="0.2.2"; sha256="0x1k90h6aw7fpvmgbbdmkqvgxfnn4w5xxfck7f4r7zhaxfqbzp2s"; depends=[httr xml2]; }; lunar = derive2 { name="lunar"; version="0.1-04"; sha256="0nkzy6sf40hxkvsnkzmqxk4sfb3nk7ay4rjdnwf2zym30qax74kk"; depends=[]; }; + lutz = derive2 { name="lutz"; version="0.1.0"; sha256="1yf1bd005nhr5afwzs9y9h36q6hs93c8bfhgjwjvhsjrdl3rz26i"; depends=[V8]; }; luzlogr = derive2 { name="luzlogr"; version="0.2.0"; sha256="0n0cm94aianwcypa0gwdjvyy3dwbkfv6zi1gq2jn57b41fg20lq5"; depends=[assertthat]; }; lvec = derive2 { name="lvec"; version="0.1.1"; sha256="1mpw01z0n0cql451qmi0b77pbfkhx6jyc4zzs5nl82jb6x3y20wn"; depends=[BH]; }; lvm4net = derive2 { name="lvm4net"; version="0.2"; sha256="0al0answp3rngq69bl3ch6ylil22wdp1c047yi5gbga853p7db0c"; depends=[ellipse ergm igraph MASS network]; }; lvnet = derive2 { name="lvnet"; version="0.3.2"; sha256="0ynp7399q98dgh51fkw1r1z8iy3qm41ny887a955n8kp8pp9l737"; depends=[corpcor dplyr glasso lavaan Matrix mvtnorm OpenMx psych qgraph semPlot]; }; lvplot = derive2 { name="lvplot"; version="0.2.0"; sha256="01sisj2vbx2yb5w9cjzyaf9j46vh4kkw05xccq1f7wmsg69zmj6b"; depends=[ggplot2 RColorBrewer]; }; - lwgeom = derive2 { name="lwgeom"; version="0.1-0"; sha256="03w1dp6r1zhjkwpzfv9864vc7bck0kqg3k8y3fq6c33np8gdqjvq"; depends=[Rcpp sf units]; }; + lwgeom = derive2 { name="lwgeom"; version="0.1-4"; sha256="0x58a04sklrr6vr38hbd2900b3bigdfj7zyk6pzj9y7yy5mr2cjg"; depends=[Rcpp sf units]; }; lxb = derive2 { name="lxb"; version="1.5"; sha256="16x1mvhxqhvibzmv6mlqcmkgic2sha1xagf7r2azmn4z8x1m9w6n"; depends=[]; }; lymphclon = derive2 { name="lymphclon"; version="1.3.0"; sha256="1jns41sk2rx1j3mg06dzy434k30gpfhbkn6s47fmyv1y8701vfl0"; depends=[corpcor expm MASS]; }; m2b = derive2 { name="m2b"; version="1.0"; sha256="0agzw67mmwrw1f61yn24z5w1pgjssdapg3li0a53i3ylnij45mzr"; depends=[caret caTools e1071 geosphere ggplot2 randomForest]; }; @@ -7765,21 +7928,21 @@ in with self; { macc = derive2 { name="macc"; version="1.0.1"; sha256="1qj4mlikbqrxa6m46527xmxdbk7b3l95z6jdgpmi0ifywjiv52a4"; depends=[car lme4 MASS nlme optimx]; }; machQA = derive2 { name="machQA"; version="0.1.4"; sha256="1rdrjy9sxql2c9y691a1jrmgsv7m1ihsschixxb6wc7aahf7mav6"; depends=[machina plyr]; }; machina = derive2 { name="machina"; version="0.1.6"; sha256="009mzqb5jgnilj9b5ldmm5600008bljlqacm8jjxvqsfnfdfg8zv"; depends=[DT httr jsonlite lubridate rhandsontable xts]; }; - macleish = derive2 { name="macleish"; version="0.3.1"; sha256="0rzla5laj1fhr31ajv1nlaphbcx25clpjm8j624l31ginpk43pja"; depends=[DBI dplyr etl lubridate readr rgdal rgeos sp]; }; + macleish = derive2 { name="macleish"; version="0.3.2"; sha256="1kna1wq3p6xfzfdhw8dpdfvy4l656xcrra1f0ir86a815pm2a8l3"; depends=[dplyr etl lubridate readr rgdal rgeos sp]; }; mada = derive2 { name="mada"; version="0.5.8"; sha256="17d41kpxjf6h8j83w6jhxm71f03nc8i2aw0xaqzrpcf5rxxy8wv8"; depends=[ellipse mvmeta mvtnorm]; }; maddison = derive2 { name="maddison"; version="0.1"; sha256="1ji51wnj0ybjd30b4bwn5npyswrmcfrbxcmdlngwzvca1knh8g1c"; depends=[]; }; - madness = derive2 { name="madness"; version="0.2.2"; sha256="0facd1km06kjd70prkjkns8x2nyavj4m7lgiyxd7gpr9plba5wmr"; depends=[expm Matrix matrixcalc]; }; + madness = derive2 { name="madness"; version="0.2.3"; sha256="0qmqgrjxb0853m9kdi8cl1b9q9dljdi2zylw22asfv77f323413z"; depends=[expm Matrix matrixcalc]; }; madr = derive2 { name="madr"; version="1.0.0"; sha256="0lzg75kphz4a0w6n0jbsq87g72jvrbkyas4j813mryq2nv4lmsl4"; depends=[]; }; madrat = derive2 { name="madrat"; version="1.22.1"; sha256="0wk2svhi4209p8ab8i2g9q22kswpisphb2a9ln5lzwdhnryk4ya9"; depends=[digest magclass spam stringr]; }; mads = derive2 { name="mads"; version="0.1.5"; sha256="1ac34iff9hvl1bxk3gs5s3i311g9y59nd6v9jhvnfd6wfhck7krs"; depends=[mrds]; }; madsim = derive2 { name="madsim"; version="1.2.1"; sha256="11gfyimbz363p5xy1x6rsz5fcgzcr55myc5aaz5lazjkcnfn17aq"; depends=[]; }; mafs = derive2 { name="mafs"; version="0.0.3"; sha256="1apacrk8y5b5ids62vd1kn2k28bya9pydxxmdw2dhjyzkgrakdhn"; depends=[cmprsk colorspace CombMSC Epi etm forecast forecastHybrid fracdiff ggplot2 ggseas gtable munsell numDeriv plyr quadprog Rcpp scales tictoc tidyr timeDate tseries zoo]; }; magclass = derive2 { name="magclass"; version="4.51.1"; sha256="1p4pbwjkn9ic3vqjh9m4b18s78f8wx0815n4dyg9pin8p14klzil"; depends=[abind maptools ncdf4 reshape2 sp]; }; - magic = derive2 { name="magic"; version="1.5-6"; sha256="1399w1zhz79nj8cdhslybncd9h6rylfhb548nv22ip0dxxdkyv0v"; depends=[abind]; }; + magic = derive2 { name="magic"; version="1.5-8"; sha256="083cgpp3v03li0h8597b3g21pd9lkbmn9pyssblnhc800mpc52vz"; depends=[abind]; }; magicLamp = derive2 { name="magicLamp"; version="0.1.0"; sha256="1nfcnbqd6vawz8l3vgkbhmm462xdvaa4pn6axzmz8hl05xv2k3cv"; depends=[httr tibble]; }; magicaxis = derive2 { name="magicaxis"; version="2.0.3"; sha256="08nkf9k2ijlm52ybncfiwrghy911wpvwpvdvllcz2d4slk1vdakj"; depends=[celestial mapproj MASS plotrix sm]; }; magicfor = derive2 { name="magicfor"; version="0.1.0"; sha256="07l33fczr1x42sfxrsqq4q6r65sdflin6l8f5cgclnvx1858jdip"; depends=[]; }; - magick = derive2 { name="magick"; version="1.5"; sha256="1zjj7gw44gh2m0k2w9s66hh4bd6z0ww2m5lik7fljpifr6h9p1c5"; depends=[curl knitr magrittr Rcpp]; }; + magick = derive2 { name="magick"; version="1.6"; sha256="1xkhg4g7n5g0ri852nbdb19lnqfl16g1w08qpn5riy6fah2vrhd1"; depends=[curl knitr magrittr Rcpp]; }; magree = derive2 { name="magree"; version="1.0"; sha256="1qkd6p5g3aigcb0f4d08gc5323alvahzmazm3bzsmz1w033xd1hh"; depends=[]; }; magrittr = derive2 { name="magrittr"; version="1.5"; sha256="1s1ar6rag8m277qcqmdp02gn4awn9bdj9ax0r8s32i59mm1mki05"; depends=[]; }; mail = derive2 { name="mail"; version="1.0"; sha256="1m89cvw5ba4d87kp2dj3f8bvd6sgj9k56prqmw761q919xwprgw6"; depends=[]; }; @@ -7796,23 +7959,23 @@ in with self; { manhattanly = derive2 { name="manhattanly"; version="0.2.0"; sha256="185fkakx4v35n4gmlpk2kfm2bm8p320q4khkw936m09zx3aqz398"; depends=[ggplot2 magrittr plotly]; }; manifestoR = derive2 { name="manifestoR"; version="1.2.4"; sha256="1hd4qsa2xsa1dq5jnwh1bph34glkpaabjmsnavdjhkfzjilp32ya"; depends=[base64enc dplyr functional httr jsonlite magrittr NLP psych tibble tm zoo]; }; manipulate = derive2 { name="manipulate"; version="1.0.1"; sha256="1klknqdfppi5lf6zbda3r2aqzsghabcsaxmvd3vw3cy3aa984zky"; depends=[]; }; - manipulateWidget = derive2 { name="manipulateWidget"; version="0.7.0"; sha256="1xiiaaay8szmw36vli3kgg4mn73hjdbaqq0w0l01wc2qhv3fa30n"; depends=[base64enc htmltools htmlwidgets knitr lazyeval miniUI shiny]; }; + manipulateWidget = derive2 { name="manipulateWidget"; version="0.8.0"; sha256="19vcf3q2q8r53dygc8kh7pbcbjs9q6knylz2jnc9pwxq3wdkbrp7"; depends=[base64enc codetools htmltools htmlwidgets knitr miniUI shiny]; }; mapReasy = derive2 { name="mapReasy"; version="1.0"; sha256="13va0z967ckwxnnianki5aj66km0x6r37nj4mz9qd3b0bps4g2kj"; depends=[Hmisc rgdal sp]; }; mapStats = derive2 { name="mapStats"; version="2.4"; sha256="18pp1sb9p4p300ffvmzjrg5bv1i7f78mhpggq83myc26c3a593na"; depends=[classInt colorspace Hmisc lattice maptools RColorBrewer reshape2 sp survey]; }; mapdata = derive2 { name="mapdata"; version="2.2-6"; sha256="0k3hsnyvax20jph384gca10rl7a9fcglgkqcjsc5hndx3qrwpanv"; depends=[maps]; }; mapedit = derive2 { name="mapedit"; version="0.3.2"; sha256="0x1jyll45kx1q3bq3visyq75jvinhw3h0yy1n1rams61vvxrqfxk"; depends=[dplyr htmltools htmlwidgets jsonlite leaflet leaflet_extras mapview miniUI sf shiny]; }; mapfit = derive2 { name="mapfit"; version="0.9.7"; sha256="16a318bz3my27qj0xzf40g0q4bh9alg2bm6c8jbwgswf1paq1xmx"; depends=[Matrix]; }; mapfuser = derive2 { name="mapfuser"; version="0.1.2"; sha256="1q7l6rfs6dv76ifizfqq4pdpjpb2zwzd3vvrnhdzh8vw2mrlqcjg"; depends=[doParallel dplyr foreach ggplot2 igraph lazyeval LPmerge mgcv plotly stringi tidyr visNetwork]; }; - mapmisc = derive2 { name="mapmisc"; version="1.6.3"; sha256="0akrrm5zrsgq0i69m1wb43xy5nh2w8fa05zz6fpwdmpjy4x09c2g"; depends=[raster sp]; }; + mapmisc = derive2 { name="mapmisc"; version="1.7.0"; sha256="0m8a0zzdrmqkkv9clfar9acij80fmanqny08g9xlir14620aq38c"; depends=[raster sp]; }; mapplots = derive2 { name="mapplots"; version="1.5"; sha256="09sk78a0p8hlwhk3w2dwvpb0a6p7fqdxyskvz32p1lcav7y3jfrb"; depends=[]; }; mapproj = derive2 { name="mapproj"; version="1.2-5"; sha256="0rjz37r4rizk2c6jaf54f0kfb60dqv6b262cnhiwjl55d4x6l0pk"; depends=[maps]; }; mapr = derive2 { name="mapr"; version="0.3.4"; sha256="14f7zfzxb1h935bbybj2l2n4a62cnq0wvgmc09in0fvnl75jl971"; depends=[ggplot2 gistr jsonlite leaflet RColorBrewer rworldmap sp spocc]; }; maps = derive2 { name="maps"; version="3.2.0"; sha256="0577f3b5d3a7djl7r0miy9mzr6xq6jb32p8nyrma7m2azasbwyj3"; depends=[]; }; - mapsapi = derive2 { name="mapsapi"; version="0.2.0"; sha256="0nw2v5h2pmwm6viic6lrhaxbdd7scnvi53c2z5s462wi33igp3sm"; depends=[bitops magrittr sf xml2]; }; + mapsapi = derive2 { name="mapsapi"; version="0.3.0"; sha256="070dckm5dkicmwkpji4zvap9h9rl3n3l7fxhz2ryslblbrzx70fn"; depends=[bitops magrittr plyr sf xml2]; }; maptools = derive2 { name="maptools"; version="0.9-2"; sha256="075lmb3b62171cw2dg8fv1vwmvfzg39r1ji7jwb8s5k9dz88ry1v"; depends=[foreign lattice sp]; }; maptpx = derive2 { name="maptpx"; version="1.9-2"; sha256="1i5djmjg0lsi7xlkbvn90njq1lbyi74zwc2nldisay4xsbgqg7fj"; depends=[slam]; }; maptree = derive2 { name="maptree"; version="1.4-7"; sha256="1k7v84wvy6wz6g0dyiwvd3lvf78rlfidk60ll4fz7chvr2nrqdp4"; depends=[cluster rpart]; }; - mapview = derive2 { name="mapview"; version="2.2.0"; sha256="13r9kvhhmrfzfvmk8wy6jmhaklralm3h3mi65hlaybmc22f7ylp7"; depends=[base64enc brew gdalUtils htmltools htmlwidgets lattice leaflet png raster Rcpp satellite scales sf sp viridisLite webshot]; }; + mapview = derive2 { name="mapview"; version="2.3.0"; sha256="07sp891j8dqryjibwdnb2j0d5kjnbndl13hgazqrk5rg4phj0hl5"; depends=[base64enc brew gdalUtils htmltools htmlwidgets lattice leaflet png raster Rcpp satellite scales sf sp svglite uuid viridisLite webshot]; }; mar1s = derive2 { name="mar1s"; version="2.1"; sha256="0psjva7nsgar5sj03adjx44pw0sdqnsd96m4g6k8d76pv30m1g7l"; depends=[cmrutils fda zoo]; }; march = derive2 { name="march"; version="1.4"; sha256="1wfhm33k2j5yim56sg0wd02ypfhlp9fc138vmdsdjp6nh4y23hnj"; depends=[]; }; marcher = derive2 { name="marcher"; version="0.0-2"; sha256="0hcxbfrwniih4kvx5sxhlffz1pc87kf52v8hvaf193rhhdykis5q"; depends=[magrittr Matrix minpack_lm mvtnorm numDeriv plyr RColorBrewer scales zoo]; }; @@ -7823,8 +7986,8 @@ in with self; { marinespeed = derive2 { name="marinespeed"; version="0.1.0"; sha256="1r9bpggb88px8149dsga3xmkjhjq6ybs6a5kp60qz28iyr183mar"; depends=[bit geosphere sp]; }; markdown = derive2 { name="markdown"; version="0.8"; sha256="1vcgsh2m2f5kfgappgg71nbf04ff0j1sbk668krjs3r2n89dk3sk"; depends=[mime]; }; marked = derive2 { name="marked"; version="1.1.13"; sha256="0zgfd7fdcrvvqnlgzarly16zjnipshxsa1g3j9jqc5kbqvh7fnh2"; depends=[coda expm lme4 Matrix numDeriv optimx R2admb Rcpp TMB truncnorm]; }; - markmyassignment = derive2 { name="markmyassignment"; version="0.6.1"; sha256="167q4fwn2ssqn588wx3ig923rcr74m95na1z1wdfy67jczsk492l"; depends=[codetools httr lazyeval testthat yaml]; }; - markophylo = derive2 { name="markophylo"; version="1.0.4"; sha256="12np5rg59wjyh1mfhhfh115ziciba973fjvbrhn4qzdnry1mwbdb"; depends=[ape numDeriv phangorn Rcpp RcppArmadillo]; }; + markmyassignment = derive2 { name="markmyassignment"; version="0.8.1"; sha256="1y388s73b1zs482d1d7z40kg4hizp46lc3279xspm2ryx4m49mzj"; depends=[checkmate codetools httr lazyeval rlang testthat yaml]; }; + markophylo = derive2 { name="markophylo"; version="1.0.6"; sha256="1gyj3ykwh4ljrb5s80hihy7wl89y3p4xkckspvv4ynl9lnsbm7cs"; depends=[ape numDeriv phangorn Rcpp RcppArmadillo]; }; markovchain = derive2 { name="markovchain"; version="0.6.9.8-1"; sha256="1av89829fwnf2bll7b75v2vrglw4130d5c42c3i1fiqh54jxjy7k"; depends=[expm igraph matlab Matrix Rcpp RcppArmadillo RcppParallel]; }; marl = derive2 { name="marl"; version="1.0"; sha256="0rndnf3rbcibv3gsrw1kfp5zhg37cw9wwlz0b7dbwprd0m71l3pm"; depends=[]; }; marmap = derive2 { name="marmap"; version="0.9.6"; sha256="1b0mpygk18ri0xs9f56j2g7zmka7krnw7fmh9m9xisbvq2g23g92"; depends=[adehabitatMA DBI gdistance geosphere ggplot2 ncdf4 plotrix raster reshape2 RSQLite shape sp]; }; @@ -7833,23 +7996,23 @@ in with self; { matR = derive2 { name="matR"; version="0.9"; sha256="0lih3g2z6rxykprl3s529xcf466bpzpsv4l20dkgx1fgfslfcl2p"; depends=[BIOM_utils MGRASTer]; }; matchMulti = derive2 { name="matchMulti"; version="1.1.6"; sha256="05nkrncrf7vq2bmqbhm9n6p6cyb4drbhjrrfdcw6qcdgvh3bbiy0"; depends=[coin Hmisc MASS mvtnorm plyr rcbsubset weights]; }; matchbook = derive2 { name="matchbook"; version="1.0.7"; sha256="0xfqg8z2zkn215kqmjjkqdwrgsk7cn4jdpxfgd6razhcbvflg48j"; depends=[]; }; - matchingMarkets = derive2 { name="matchingMarkets"; version="0.3-3"; sha256="0jpx4k82h0mdhbwb1jc8g18qjsr9448m6d69zii99bdinsd637rv"; depends=[lattice lpSolve partitions Rcpp RcppArmadillo RcppProgress rJava]; }; - matchingR = derive2 { name="matchingR"; version="1.2.1"; sha256="09vx3yqaq0pq341v8rm2hjxx0aza0bnh9iffrygwbhls7fi7kn7y"; depends=[Rcpp RcppArmadillo]; }; + matchingMarkets = derive2 { name="matchingMarkets"; version="0.3-4"; sha256="1qp876xnqrr4rz9a8xc0hw3rzfhjw9nl4qmzcrr9r03xj2dn9i1p"; depends=[lattice lpSolve partitions Rcpp RcppArmadillo RcppProgress rJava]; }; + matchingR = derive2 { name="matchingR"; version="1.3.0"; sha256="1rpw5a52alh5diiqr7f87vhpgp3w3f8lg8wkaqvr5idid9fkll1i"; depends=[Rcpp RcppArmadillo]; }; matconv = derive2 { name="matconv"; version="0.3.2"; sha256="0vnmqz5vzv5n0cfpgr30gkl0pv8p2b5cp3ap6mn01sxd671lx38z"; depends=[]; }; - matdist = derive2 { name="matdist"; version="0.1.0"; sha256="0g7ysqwh8nd0150yj5799rzp9586nh98rq4lpyavsjj26kp3if0j"; depends=[Rcpp RcppArmadillo RcppGSL RcppZiggurat Rlinsolve]; }; mateable = derive2 { name="mateable"; version="0.3.1"; sha256="1ka9xxicibpfg6k3njq5f5576jwj734r1mb46a2cmiyq676ks7pp"; depends=[FNN Rcpp sn]; }; mathgraph = derive2 { name="mathgraph"; version="0.9-11"; sha256="0xikgzn24p0qqlrmaydmjk5yz5pq2rilsvpx86n3p2k2fc3wpwjy"; depends=[]; }; mathpix = derive2 { name="mathpix"; version="0.2.0"; sha256="0a2yybhim2l08n03505ks8vzk8w8azlz3pngsczzd42dqfdphi9q"; depends=[base64enc httr magick purrr rstudioapi texPreview]; }; matie = derive2 { name="matie"; version="1.2"; sha256="1ymx49cyvz63imqw5n48grilphiqvvdirwsrv82p7jgxdyav2xv0"; depends=[cba dfoptim gplots igraph mvtnorm seriation]; }; matlab = derive2 { name="matlab"; version="1.0.2"; sha256="0m21k2vzbc5d3c93p2hk4208xyd2av2slg55q5j1ibjidiryqgd2"; depends=[]; }; - matlabr = derive2 { name="matlabr"; version="1.4.3"; sha256="1bjwr5aa4piicgwwiqnzyknlizrj8ik8lgr0fwj8p8ajh12s2vpn"; depends=[stringr]; }; + matlabr = derive2 { name="matlabr"; version="1.5.0"; sha256="0gy639fv0b85h4z96b2b3m635q4w62q63kfxfqny3pwr0r5vsc2p"; depends=[stringr]; }; matlib = derive2 { name="matlib"; version="0.8.1"; sha256="080mbmr1lb5ha5ql40hv0idcnnbyaai46c42z756kdyq9pdzcabf"; depends=[car rgl]; }; matpow = derive2 { name="matpow"; version="0.1.1"; sha256="1a6q21ba16qfdpykmjwgmrb1kkvvyx48qg8cbgpdmch0vhibcgcp"; depends=[]; }; matrixLaplacian = derive2 { name="matrixLaplacian"; version="1.0"; sha256="1ixqdv3sz3sc79wn3vqhlq79j7x7cvl878m5hgvbcg6klfvlmmci"; depends=[scatterplot3d]; }; - matrixStats = derive2 { name="matrixStats"; version="0.52.2"; sha256="19fjf19cr0p3j9pj17myz39zpi5bh7ci72db3la9my09n6k6mnir"; depends=[]; }; + matrixStats = derive2 { name="matrixStats"; version="0.53.1"; sha256="0bkiz5fm09d3512mfr2ymj9qsb1b8aic5l5m6fkaf5j7nsgvqw6z"; depends=[]; }; matrixcalc = derive2 { name="matrixcalc"; version="1.0-3"; sha256="1c4w9dhi5w98qj1wwh9bbpnfk39rhiwjbanalr8bi5nmxkpcmrhp"; depends=[]; }; matrixpls = derive2 { name="matrixpls"; version="1.0.5"; sha256="04sshb88rq2mp3y4rrs6nkzr4kc380vx380r911c7j975l55a183"; depends=[assertive lavaan MASS matrixcalc psych]; }; - mau = derive2 { name="mau"; version="0.1.0"; sha256="0ssvj089smndr7h73la4gnn3dp63p8zkimm19q3rsw4lajv8ws79"; depends=[data_table ggplot2 gtools igraph RColorBrewer stringr]; }; + matrixsampling = derive2 { name="matrixsampling"; version="1.0.0"; sha256="0bjqdf19alzv33d9b037y135hqfp9n6z35m9j7j95h27gpna5wbc"; depends=[keep]; }; + mau = derive2 { name="mau"; version="0.1.2"; sha256="1wgiai8f1kbjh9hfwv4m0kavd44ib5xb33p8m16zpawnw14m7sj5"; depends=[data_table ggplot2 gtools igraph RColorBrewer Rdpack stringr]; }; maxLik = derive2 { name="maxLik"; version="1.3-4"; sha256="0jjb5kc7dvx940ybg7b7z9di79v75zm2xlb0kj2y7rmi45vvh6hq"; depends=[miscTools sandwich]; }; maxTPR = derive2 { name="maxTPR"; version="0.1.0"; sha256="13x5rz0mfha5pzahkk4x67ncz9v77sa690cyl6wigwsldsrvzr3h"; depends=[aucm Rsolnp]; }; maxent = derive2 { name="maxent"; version="1.3.3.1"; sha256="1skc7d0p6kg0gi1bpgaqn2dmxjzbvcphx5x3idpscxfbplm5v96p"; depends=[Rcpp SparseM tm]; }; @@ -7857,8 +8020,9 @@ in with self; { maxmatching = derive2 { name="maxmatching"; version="0.1.0"; sha256="1xbwrhmr8gzvlcprib7nzvqrcd355bhx7wkqxrvfk4g7dvskf9ka"; depends=[igraph]; }; maxnet = derive2 { name="maxnet"; version="0.1.2"; sha256="1rfcylbv068pz4jgry5ijszwf5fibz566s5iv0ar8dhv0fhjr86z"; depends=[glmnet]; }; maxstat = derive2 { name="maxstat"; version="0.7-25"; sha256="114z1rwxwvk05ijjhdppzm148n1h192fp0w12ky10zkrhf6kphbg"; depends=[exactRankTests mvtnorm]; }; - mazeGen = derive2 { name="mazeGen"; version="0.1.2"; sha256="05lsb7ldk6nzmfaklbvkcb4n5sfnimgcv5vgilblw5awzhavj5vm"; depends=[igraph]; }; - mazealls = derive2 { name="mazealls"; version="0.1.0"; sha256="0qwjafdd0qkankl6alcpjg17bx7lvvg0qn7p6zk8p3l3ibg5ikwc"; depends=[TurtleGraphics]; }; + mazeGen = derive2 { name="mazeGen"; version="0.1.3"; sha256="192xygg3l4rpqp49sgd5hpp4h3f8wjhyldn0l8abxhsks7jd2kfb"; depends=[igraph]; }; + mazealls = derive2 { name="mazealls"; version="0.2.0"; sha256="14j6syw1zkgs4cnmxzqpm6klmgvck2gg97wkzmy9al6n0biy8gmb"; depends=[TurtleGraphics]; }; + mazeinda = derive2 { name="mazeinda"; version="0.0.1"; sha256="0ns4ib73y4fghf7p1wg0a05js4mqr66dpp49p1h039pqrb0f1vwd"; depends=[foreach]; }; mbbefd = derive2 { name="mbbefd"; version="0.8.8.1"; sha256="0akga4p8nj5nnfv18gk84mhl2nd6s10k1c1rh730sd44qm6zpiai"; depends=[actuar alabama fitdistrplus gsl MASS Rcpp]; }; mbclusterwise = derive2 { name="mbclusterwise"; version="1.0"; sha256="1ilqaxcxf1k3ck910s0xqwnp88w8ag5rn1dpvaa1i7jlcldsbnhp"; depends=[ade4 doParallel foreach kknn]; }; mbest = derive2 { name="mbest"; version="0.5"; sha256="0l6vmcqkd2b0b90jmsswrhbdmhq2x92g7sr2l99rp7xp1cxdq02w"; depends=[bigmemory foreach lme4 logging nlme]; }; @@ -7875,12 +8039,11 @@ in with self; { mcPAFit = derive2 { name="mcPAFit"; version="0.1.4"; sha256="1h5kiry8bvdrgyqf7cqsag0b7rscwc7phayzf6h4css1667bvm0g"; depends=[PAFit RColorBrewer Rcpp]; }; mcbiopi = derive2 { name="mcbiopi"; version="1.1.2"; sha256="12h4bv3hx1m6bsqdxj5n3b5gh98ms508am8pigz7ckmv0xkyhx85"; depends=[]; }; mcc = derive2 { name="mcc"; version="1.0"; sha256="0p661a870bvh3xhcahqqq85azn9rjl3vacjy96jsdn86irj4s0vi"; depends=[]; }; - mcca = derive2 { name="mcca"; version="0.1.0"; sha256="1ymnpqqgxacljr1y6hlr2agdygzlvsjjqili17289w2p14mljxpi"; depends=[e1071 MASS nnet rpart]; }; + mcca = derive2 { name="mcca"; version="0.2.0"; sha256="01c7dp9m8vqffhq0ixsqcfw40jsmb6dwiblym31h84f9s0x4f00j"; depends=[e1071 MASS nnet pROC rpart]; }; mcclust = derive2 { name="mcclust"; version="1.0"; sha256="00qprmsjwbn2d0jl7p9mz8pv7k8ld3mzk862pr1grigk0lqwhx06"; depends=[lpSolve]; }; mccr = derive2 { name="mccr"; version="0.4.4"; sha256="1scqds1yx317qmjappy2h1m564dcmsqqfpdm8pm3plalag16xrhj"; depends=[]; }; mcemGLM = derive2 { name="mcemGLM"; version="1.1"; sha256="07ky3bvcns24qia9pyvf5lp7764h8gn2g8zr304iz4x9bq6jvsi0"; depends=[Rcpp RcppArmadillo trust]; }; mcga = derive2 { name="mcga"; version="3.0.1"; sha256="0q0nn881lii8wfw28k8jh9z0kbi5ljcwi2wpq460k2w3agsjzw5n"; depends=[GA Rcpp]; }; - mcgfa = derive2 { name="mcgfa"; version="1.0.0"; sha256="19q6lmrmbl3sh844n7mnl1r01bs8kgf0gghy4p4xmba1la0cb67k"; depends=[pgmm]; }; mcgibbsit = derive2 { name="mcgibbsit"; version="1.1.0"; sha256="09ydcbjz3abmh46966v01dh26fy79dfklk3zjf262zp3c62ld9yf"; depends=[coda]; }; mcglm = derive2 { name="mcglm"; version="0.3.0"; sha256="1q2zc0xn4inp9inadb52yc0svbh581qxxjzc08pgrm9l3xms4a14"; depends=[assertthat Matrix]; }; mcheatmaps = derive2 { name="mcheatmaps"; version="1.0.0"; sha256="1gglm32xpmim38m7fziczgqfbpcq2899lxardsrzg6j1vhmf765y"; depends=[gridBase]; }; @@ -7906,17 +8069,17 @@ in with self; { mded = derive2 { name="mded"; version="0.1-2"; sha256="1j8fcz5yc70p9qd9l010xj1b625scdps8z1pqh75b45p2hiqbhlc"; depends=[]; }; mdftracks = derive2 { name="mdftracks"; version="0.2.0"; sha256="0l8dc6ljrhbm8jwadaa3xkf6nx90vyiig15p7rryswczz9hw5ga6"; depends=[hellno]; }; mdhglm = derive2 { name="mdhglm"; version="1.6"; sha256="1lvckais4c3pbf6zrpfkdlyqhcg4jaw11n00622h9ks413fl788v"; depends=[boot Matrix mvtnorm numDeriv]; }; - mdmb = derive2 { name="mdmb"; version="0.4-15"; sha256="0qm5nyag19in8mpck1gvmsxmpj9dzfsnryx4gbwrss4yaapn7gmx"; depends=[CDM coda miceadds sirt TAM]; }; + mdmb = derive2 { name="mdmb"; version="0.6-17"; sha256="1ydvfjqid7bsgryr8j77ajmh2q40s3gh67n8027f70pa8amr9fnq"; depends=[CDM coda MASS miceadds sirt TAM]; }; mdpeer = derive2 { name="mdpeer"; version="1.0.1"; sha256="1vsqhah8h47s8k687fwa352549mdz16mwk1g7rcmhx75c2k85w2q"; depends=[boot ggplot2 glmnet magic nlme nloptr psych reshape2 rootSolve]; }; - mdsOpt = derive2 { name="mdsOpt"; version="0.1-4"; sha256="1nbs2dxwh78kh2qp19whk6infckxrkckyxjlmcmcfmk578ivb5xb"; depends=[clusterSim smacof]; }; + mdsOpt = derive2 { name="mdsOpt"; version="0.2-2"; sha256="1wg0f2a3z5pdiw8lljfrifn7lf00rza8rmrdh61dmna2nkrg9j4g"; depends=[clusterSim smacof symbolicDA]; }; mdscore = derive2 { name="mdscore"; version="0.1-3"; sha256="10cl5r6kd9chdik5v0q91x40xpw2cjvvyi220z4bvngpb0989x8j"; depends=[MASS]; }; mdsdt = derive2 { name="mdsdt"; version="1.2"; sha256="0nbzc54jac4wmfyrs821ycxh749cb1zfxcws0nbpk35rydqkc627"; depends=[ellipse mnormt polycor]; }; - mdsr = derive2 { name="mdsr"; version="0.1.4"; sha256="1g9a6g8rf2svndis7569bnbj3jx1mgli172fjzdypfnhiyhd46vb"; depends=[babynames DBI dbplyr downloader dplyr ggplot2 mosaic RMySQL tidyverse]; }; - mdw = derive2 { name="mdw"; version="2017.8-27"; sha256="0rsp6s15fgb7rni2qhgjx6dz1byvbaan5zhi6ixskpfs3z6h8fv8"; depends=[]; }; - meaRtools = derive2 { name="meaRtools"; version="1.0.1"; sha256="1sgb1wnwf9kazzk35qk0zdw432qq535cwb2bhd4s5x2h1qqia53x"; depends=[emdist ggplot2 gridExtra gtools lattice plyr Rcpp reshape2]; }; + mdsr = derive2 { name="mdsr"; version="0.1.5"; sha256="0b80l478v68w91vsmvvyvnmk0yasybmm013psy4181lhvxc93kma"; depends=[babynames DBI dbplyr downloader dplyr ggplot2 mosaic RMySQL tidyverse]; }; + mdw = derive2 { name="mdw"; version="2017.12-03"; sha256="054vssnypbik0yf6smicggnkrqf6kx8k21nbf5rminsh00sx39k1"; depends=[]; }; + meaRtools = derive2 { name="meaRtools"; version="1.0.2"; sha256="1xxw0aq4k5z4i3ndja1rxl9calb8hmp4jv9l79zm33vdlggpkxzg"; depends=[emdist ggplot2 gridExtra gtools lattice plyr Rcpp reshape2]; }; meanShiftR = derive2 { name="meanShiftR"; version="0.51"; sha256="0qcciayriygfwkb15n863amcpcfl97fr1sarwm3d269idf5m7w6x"; depends=[]; }; meanr = derive2 { name="meanr"; version="0.1-1"; sha256="080x21jnbsl6qlrgv12p9qd332ciph3lh18fgs9jagfyygf4f9hg"; depends=[]; }; - measuRing = derive2 { name="measuRing"; version="0.4"; sha256="165j3i5295hxzqg8l2hrd61a0fh9xmw61dpx8js8qjz1zi9rm84x"; depends=[dplR pastecs png tiff]; }; + measuRing = derive2 { name="measuRing"; version="0.4.2"; sha256="07asz2kninbmj9vci2w20a7cfbwfa1srvmb2dlzccdivjmrd5wnq"; depends=[dplR pastecs png tiff]; }; measurements = derive2 { name="measurements"; version="1.1.0"; sha256="1zi6mpwyxycbphq48s7vfc8gm76nidpa2gafp0jxiv56rwpv3jc3"; depends=[]; }; meboot = derive2 { name="meboot"; version="1.4-7"; sha256="1i0h71aj49hyj889447s611gz668ys7xlr1i82b5nvaf6chfbfin"; depends=[dynlm nlme]; }; mederrRank = derive2 { name="mederrRank"; version="0.0.8"; sha256="1fvvik3bhjm6c0mhi2ma915986k2nj3lr2839k5hfrr7dg3lw3f4"; depends=[BB numDeriv]; }; @@ -7929,35 +8092,36 @@ in with self; { mefa = derive2 { name="mefa"; version="3.2-7"; sha256="1qrf6d3y38q7yy6bg3bxg7514d9paz1f8y6sr7lbksi30qn92fmj"; depends=[]; }; mefa4 = derive2 { name="mefa4"; version="0.3-4"; sha256="11zg30i2fkxdv8fn7jilbmm7k5g0ls8f91bpq6qiwiagwg8gj2lh"; depends=[Matrix pbapply]; }; meifly = derive2 { name="meifly"; version="0.3"; sha256="1x3lhy7fmasss0rq60z5qp74ni32sahw62s8cnp2j431sp95pczc"; depends=[leaps MASS plyr]; }; + mekko = derive2 { name="mekko"; version="0.1.0"; sha256="09y50k4r4mnx351a5zhkqg9s2xyl3d149dhmfy2z6hzm5yg2ajyi"; depends=[ggplot2]; }; meltt = derive2 { name="meltt"; version="0.3.3"; sha256="08qifdpk0c9digpayw1d9h2p9q4nyrlihg8kjqacirb5wh39wr6r"; depends=[ggmap ggplot2 plotGoogleMaps plyr reticulate scales sp]; }; melviewr = derive2 { name="melviewr"; version="0.0.1"; sha256="19syc3d6zc0hmcjjdj7ibrdqxcdlh95ny970f3ska453qh1898b2"; depends=[cairoDevice gtools gWidgets gWidgetsRGtk2 jsonlite RColorBrewer RGtk2 RNifti]; }; mem = derive2 { name="mem"; version="2.11"; sha256="1m0s587flc0psafm1fp1dsi7g4l03plhyzx2x74axihzyh2b5dbb"; depends=[boot mixtools RColorBrewer reshape2 sm stringr]; }; - memapp = derive2 { name="memapp"; version="2.6"; sha256="018dqlpkjvsydys7gj3b7chp9bjpkp8rwjzd9jdmmihc2v2pjl2v"; depends=[DT formattable ggplot2 ggthemes mem openxlsx plotly RColorBrewer readxl reshape2 RODBC shiny shinyBS shinydashboard shinyjs shinythemes stringi stringr]; }; - meme = derive2 { name="meme"; version="0.0.7"; sha256="0pdz2hjailgqirg38p5l49n07mq9nwx9rrd9yfp0pq3w5mzkjlgj"; depends=[ggplot2 magick]; }; - memery = derive2 { name="memery"; version="0.3.1"; sha256="0i1c1lc22mh6g0manh1q2qcxmaa3binpc0ahlh69cdkl067b102z"; depends=[Cairo cowplot ggplot2 jpeg magrittr png purrr showtext sysfonts]; }; + memapp = derive2 { name="memapp"; version="2.7"; sha256="14njpab2bsrpzpdhf45ckjq6fpscwr27xixw151m670wr8r01a6w"; depends=[dplyr DT formattable ggplot2 ggthemes magrittr mem openxlsx plotly RColorBrewer readxl RODBC shiny shinyBS shinydashboard shinyjs shinythemes stringi stringr tidyr]; }; + meme = derive2 { name="meme"; version="0.1.1"; sha256="102z3zgfldggcykb7wlmw0wbdas6jbpvy2kfdps0wky3j552ir95"; depends=[ggplot2 magick showtext sysfonts]; }; + memery = derive2 { name="memery"; version="0.4.2"; sha256="0wfp3hf567a1q6mhrsgn4hr8x52yp4na8783f2d19hm0c3r4z51q"; depends=[Cairo colourpicker cowplot ggplot2 jpeg magrittr png purrr shiny shinyBS shinycssloaders showtext sysfonts]; }; memgene = derive2 { name="memgene"; version="1.0"; sha256="00b1mi2hvzzps542mh2p96s27kjqkpcic7djklfcwnfn1m4bz0i5"; depends=[ade4 gdistance raster vegan]; }; - memisc = derive2 { name="memisc"; version="0.99.14.5"; sha256="10x6fi88nil8q7bx5g34vafwl3k0gj451lg1rkgljx9dvvxzv6cd"; depends=[lattice MASS repr]; }; - memo = derive2 { name="memo"; version="1.0"; sha256="1pqlsn79gpm0d5bxnjg1c1gjaqdrdvcjvr84zpfk6nmsb2862w48"; depends=[digest]; }; + memisc = derive2 { name="memisc"; version="0.99.14.9"; sha256="1gh6shm9nwfjwfi5f4cz2jsldfdnkj6f73279l86wki5gdf36zri"; depends=[lattice MASS repr]; }; + memo = derive2 { name="memo"; version="1.0.1"; sha256="14nvqi1qsin45ksd0wp9cigjk1gghr4jijdqkaqh177dwa244r9j"; depends=[digest]; }; memoise = derive2 { name="memoise"; version="1.1.0"; sha256="034qfc2xlh30x1q2vya239w34a3ir3y2fwnx2agbgbi6592zjxmj"; depends=[digest]; }; memuse = derive2 { name="memuse"; version="4.0-0"; sha256="1g63nssxrgqgzw8qjz8202qpwhps8fbck6pn77j2wsc82dm73y7v"; depends=[]; }; - merDeriv = derive2 { name="merDeriv"; version="0.1-2"; sha256="05z0lkhmxbw82sy3qlyyb58fwbillx296ay3sskbz1clj0plph82"; depends=[lme4 Matrix nonnest2 sandwich]; }; + merDeriv = derive2 { name="merDeriv"; version="0.1-3"; sha256="0kgmv220nlg0r31bwg5qxkc8ybngg4c5q16bkknzf4khmbx19iwm"; depends=[lme4 Matrix nonnest2 sandwich]; }; merTools = derive2 { name="merTools"; version="0.3.0"; sha256="1kc32zm1wmmivf1qfs6vi7y8kwibj6sr540is82dyh7xdmbc5mx3"; depends=[abind arm blme broom dplyr DT ggplot2 lme4 mvtnorm shiny]; }; merror = derive2 { name="merror"; version="2.0.2"; sha256="13d9r5r83zai8jnzxaz1ak40876aw20zbpr244gs55rvj5j7f87q"; depends=[]; }; meshsimp = derive2 { name="meshsimp"; version="0.1.1"; sha256="0cdgq4vfjf0h6l55v687k5xs0nwmlpqmw424xgnsfnwxw5ljcvb1"; depends=[plot3D Rcpp RcppEigen]; }; metRology = derive2 { name="metRology"; version="0.9-26-2"; sha256="1i9lxgphn8nmkcp2zgjs6ylbccmfgv9lfch00xmx1xfb538jz82q"; depends=[MASS numDeriv robustbase]; }; metScanR = derive2 { name="metScanR"; version="1.1.1"; sha256="0cl3vfh8hcx230xpv5611liwk7jr49a2akz18f641yd04akk7f19"; depends=[geosphere leaflet plyr RColorBrewer RCurl]; }; - meta = derive2 { name="meta"; version="4.8-4"; sha256="0s2f1n404gfjf4k1h7x3jcys56x83y35zir7gyc32ydn88zfn57z"; depends=[]; }; - meta4diag = derive2 { name="meta4diag"; version="2.0.6"; sha256="088gxx559ikw11iiyjvgszf5i2q9hh7q439774ccxsqirkb45gcv"; depends=[caTools shiny shinyBS sp]; }; + meta = derive2 { name="meta"; version="4.9-0"; sha256="012yhxbn114q8bf75mm8ap11q33a5azzkh1b811saq77p1f6lwgq"; depends=[]; }; + meta4diag = derive2 { name="meta4diag"; version="2.0.7"; sha256="024rxnqzw9xydy0mm1w38s739qgkzjsifq23bwpvkwj0x0jnwry0"; depends=[caTools shiny shinyBS sp]; }; metaBMA = derive2 { name="metaBMA"; version="0.3.9"; sha256="14c3q4aw89r3apzm0ils886xsc6agbn8d2wgp47dc2ddwf5n8p58"; depends=[coda LaplacesDemon logspline mvtnorm runjags]; }; metaLik = derive2 { name="metaLik"; version="0.42.0"; sha256="1rk5mwgmgnqq2hrzbh936hzw3aa815l12r1a1qywap5ggmmyhszl"; depends=[]; }; metaMA = derive2 { name="metaMA"; version="3.1.2"; sha256="1mjyz06q1kc8lhfixpym4ndpnisi1r849fj3da6riwfd6ab1v181"; depends=[limma SMVar]; }; metaMix = derive2 { name="metaMix"; version="0.2"; sha256="0xlsdgincxwjzyr4i8qfmfw2wvgf41qbmyhf2rxcbarf7rmwhmqf"; depends=[data_table ggplot2 gtools Matrix Rmpi]; }; metaRNASeq = derive2 { name="metaRNASeq"; version="1.0.2"; sha256="1xz7df7ypq4326yg429pgxd6aldp14c3h3qi20j5nqr5xgsdgzqa"; depends=[]; }; - metaSEM = derive2 { name="metaSEM"; version="0.9.16"; sha256="00zfm3r0vs7zhz9qi19jhjm7qbpysbs2sdnlqsj4ml9kc0j2czns"; depends=[ellipse MASS Matrix mvtnorm OpenMx]; }; + metaSEM = derive2 { name="metaSEM"; version="1.0.0"; sha256="1i77w7b6xbi8p43s9vicj121kz7f3qp1zhqwy6qc5xcj9qaqjklp"; depends=[ellipse lavaan MASS Matrix mvtnorm numDeriv OpenMx]; }; metabolomics = derive2 { name="metabolomics"; version="0.1.4"; sha256="0m5d2784mkpkkg396y3vpvf38vmba5kvxarilq3zf818vjs4pnax"; depends=[crmn gplots limma]; }; metacart = derive2 { name="metacart"; version="1.0-0"; sha256="13dp9yz6yjd2jc7lf3w3ac3vk69ry7zygf6xnvzrcwsdmxd0258n"; depends=[ggplot2 gridExtra rpart rpart_plot]; }; - metacoder = derive2 { name="metacoder"; version="0.1.3"; sha256="1kbxv4gvpq33vg0ri9mqkaqxlqhnccycha30dv48n4m4f3s7h8ad"; depends=[ape dplyr ggplot2 igraph lazyeval magrittr RColorBrewer RCurl readr reshape reshape2 scales seqinr stringr taxize traits zoo]; }; - metacom = derive2 { name="metacom"; version="1.4.9"; sha256="1l3agymxz3qlrk0kzwlkqhalyw5ylsl6l0an8xcljgclymrb27j0"; depends=[vegan]; }; + metacoder = derive2 { name="metacoder"; version="0.2.0"; sha256="0dyd16yy7adpyksfpg6d414s1l6nls5hv1k938mn7fji1px14sgj"; depends=[ape biomformat cowplot dplyr GA ggfittext ggplot2 ggrepel igraph lazyeval magrittr phylotate RColorBrewer Rcpp RCurl readr reshape reshape2 rlang scales seqinr stringr taxa taxize traits vegan zoo]; }; + metacom = derive2 { name="metacom"; version="1.5.0"; sha256="1zsnzzxv3vsj1swybhh6g8ddffp4xrn081y192xa6a78ii8q4kav"; depends=[vegan]; }; metacor = derive2 { name="metacor"; version="1.0-2"; sha256="04k3ph0yg3jp8x4g6l1h4m0qwl51mx0626xmm0fzr1pv4b4a1ypw"; depends=[gsl rmeta]; }; metafolio = derive2 { name="metafolio"; version="0.1.0"; sha256="18s78lljwnn3j0l3mqc0svszcb3c8yzyzlpnimndbiq9yxagxnnf"; depends=[colorspace MASS plyr Rcpp RcppArmadillo]; }; metafor = derive2 { name="metafor"; version="2.0-0"; sha256="0h14wd7hr1d40p5r70f2jgdgj24jwpnr4nrj6yp5qjr466v81z96"; depends=[Matrix nlme]; }; @@ -7967,13 +8131,13 @@ in with self; { metagen = derive2 { name="metagen"; version="1.0"; sha256="0jvbm22976aqvmfnjzs51n2w099yj5hpx6hd0pgvbia80jk7b9vk"; depends=[BatchExperiments BatchJobs BBmisc ggplot2 lhs MASS metafor ParamHelpers plyr]; }; metaheur = derive2 { name="metaheur"; version="0.2.0"; sha256="1rr5mjx3v87alj7cl9hxldvhhbpkz1fzmymmkqv0hs65pny6gbqw"; depends=[doParallel foreach ggplot2 preprocomb reshape2]; }; metaheuristicOpt = derive2 { name="metaheuristicOpt"; version="1.0.0"; sha256="1wzy5dnmrdfdj1386snjyisrbzbq8v4qsnq57l3wvkg1pgnz1vh2"; depends=[]; }; - metamisc = derive2 { name="metamisc"; version="0.1.7"; sha256="1fwv3vkcwkk3mm5jmsgwpvd1r92qfjbybhvzm4jxxyy66gh9xzax"; depends=[ellipse ggplot2 lme4 metafor mvtnorm plyr]; }; + metamisc = derive2 { name="metamisc"; version="0.1.8"; sha256="06dzjnrbxqkb0d0zcdxg8fyadsbq0f0fca4xifjz16yjz1047n5k"; depends=[ellipse ggplot2 lme4 metafor mvtnorm plyr]; }; metansue = derive2 { name="metansue"; version="2.0"; sha256="102cddahlzm0b76y6pr7jxqxf28j6y3hsjd17fpnyvrwnzhqbz5m"; depends=[]; }; metap = derive2 { name="metap"; version="0.8"; sha256="06ny9zkilawdy0s8yiwhnygs3yppw89bbyf76zgdavykbzscz5lh"; depends=[lattice]; }; - metaplot = derive2 { name="metaplot"; version="0.2.1"; sha256="0d1h5p5nn5hc897zwxg7zzj45hl8n7pi8ax149blg3kpc2nxasvg"; depends=[dplyr encode fold ggplot2 lattice lazyeval magrittr rlang]; }; + metaplot = derive2 { name="metaplot"; version="0.4.1"; sha256="1spi3zrrysdxrq355rzqrvdai8hkx1dbaryxx4bdn6f2nn7p3nd2"; depends=[dplyr encode lattice magrittr rlang tidyr]; }; metaplotr = derive2 { name="metaplotr"; version="0.0.3"; sha256="01iala6cxsxv30fnlh80md5mpy3ksd2piw90zcls8f68g1c6v1jy"; depends=[ggplot2 gridExtra]; }; metaplus = derive2 { name="metaplus"; version="0.7-9"; sha256="1hrczccszx9jcgifwg6wsigsbm8ih4xjr00knb0rxyygijk38c82"; depends=[bbmle boot fastGHQuad lme4 MASS metafor numDeriv]; }; - metasens = derive2 { name="metasens"; version="0.3-1"; sha256="0nxvllfa2x6v2hpgind5xr0i40wi7cpdd18lwgy9s4jpgbn0n17p"; depends=[meta]; }; + metasens = derive2 { name="metasens"; version="0.3-2"; sha256="1wxp6gzq3wmas8hm8vqxclawxkc4p8dw2apzmg0nciqvas6dzic8"; depends=[meta]; }; metatest = derive2 { name="metatest"; version="1.0-4"; sha256="0bz6gg2n4ffkr144jxk27y24xpqhp8awr09wkaijmv8902qx6qah"; depends=[]; }; metavcov = derive2 { name="metavcov"; version="1.1"; sha256="1x87knvypkfg0x223aiak7fy7zdlfn74crmvnqzhxf2vmxljnvnh"; depends=[corpcor]; }; metaviz = derive2 { name="metaviz"; version="0.1.1"; sha256="1myhh16a7mad4gidl2xhnfv940gjqhbl8rlg6vrwvawgaiwigbxp"; depends=[ggplot2 metafor nullabor plyr RColorBrewer]; }; @@ -7984,20 +8148,22 @@ in with self; { meteoland = derive2 { name="meteoland"; version="0.6.7"; sha256="0b3hf25dxiaxjj6v9wprysbvr2m6f3vlldy77civq5fkkibx9pzi"; depends=[curl ncdf4 ncdf4_helpers qmap Rcpp rgdal sp spdep]; }; metricTester = derive2 { name="metricTester"; version="1.3.4"; sha256="1z4z8km1jr0azh2zxp1sffm5picc9y6w9yn68zr1axli0l64y3a0"; depends=[ape doParallel dplyr foreach geiger MASS picante plotrix spacodiR]; }; metricsgraphics = derive2 { name="metricsgraphics"; version="0.9.0"; sha256="1zbx82b34y0rr4w7rzvyc1nzk95w6cdkg0j1kkshbmkvplq6v9i4"; depends=[htmltools htmlwidgets magrittr]; }; - mets = derive2 { name="mets"; version="1.2.2"; sha256="1rdljq4069n7i05sqi75bcp1zpq69m13vf1nrjfg568cpwmr4m37"; depends=[lava numDeriv Rcpp RcppArmadillo survival timereg]; }; + mets = derive2 { name="mets"; version="1.2.3"; sha256="1f1mqpzpvh5vb8b8w72q13jhk978bcvwipf4bx3kzzgsf6yfxk5s"; depends=[lava numDeriv Rcpp RcppArmadillo survival timereg]; }; mev = derive2 { name="mev"; version="1.10"; sha256="0kidgghwjc81rx2vb8y1iiwvlfxafv7r11n3zz1gb7705w6ynw1m"; depends=[boot evd gmm ismev nleqslv numDeriv Rcpp RcppArmadillo rootSolve]; }; mewAvg = derive2 { name="mewAvg"; version="0.3.0"; sha256="16gc78ccjffp9qgc7rs622jql54ij83ygvph3hz19wpk22m96glm"; depends=[]; }; - mexhaz = derive2 { name="mexhaz"; version="1.3"; sha256="1sqys7k6hrs892b50cn54q2k3vnlmgz1467rdwaksailhhizpbc5"; depends=[MASS numDeriv statmod survival]; }; + mexhaz = derive2 { name="mexhaz"; version="1.4"; sha256="1c3n8g93pb38dw45ls6wh81giqw7zkksh2rmpbw46ink23ks12ij"; depends=[MASS numDeriv statmod survival]; }; + mfGARCH = derive2 { name="mfGARCH"; version="0.1.2"; sha256="08gkba5v8l0867rrxakn7js11v1yj7qp9vmzbjmri9hjcm02s44a"; depends=[numDeriv Rcpp zoo]; }; mfe = derive2 { name="mfe"; version="0.1.0"; sha256="06x6csf3pr1vdmmimg6f7iffrivj8wcdfafvld7nrzbkl09cbfbn"; depends=[C50 class e1071 infotheo MASS rpart]; }; mfp = derive2 { name="mfp"; version="1.5.2"; sha256="1i90ggbyk2p1ym7xvbf4rhyl51kmfp6ibc1dnmphgw15wy56y97a"; depends=[survival]; }; mfx = derive2 { name="mfx"; version="1.1"; sha256="1zhpk38k7vdq0pyqi1s858ns19qycs3nznpa00yv8sz9n798wnn5"; depends=[betareg lmtest MASS sandwich]; }; mgarchBEKK = derive2 { name="mgarchBEKK"; version="0.0.2"; sha256="1k4c34srnckbh5kchzmm44l91ma9sw0gi4y225igs3cl79212q9c"; depends=[mvtnorm tseries]; }; - mgcv = derive2 { name="mgcv"; version="1.8-22"; sha256="1546p6aflg3z6xl2mns1n2c3j8q2spr9cjggj9rn33vrrhsv4fss"; depends=[Matrix nlme]; }; + mgcv = derive2 { name="mgcv"; version="1.8-23"; sha256="1lsrhf1yzn25pfn3f5x8yxjqnfryim4jx3iqd7ah8aalh5asqwbp"; depends=[Matrix nlme]; }; mglR = derive2 { name="mglR"; version="0.1.0"; sha256="1b7nd913d4a1szgw2qnhlnjqhfxr95xag6jwjcb2wnnxd12lib7n"; depends=[biomaRt dplyr gdata ggplot2 gplots magrittr stringr]; }; mglmn = derive2 { name="mglmn"; version="0.0.2"; sha256="1ijkmr85s4yya0hfwcyqqskbprnkcbq8sc9c889i0gy0543fgqz4"; depends=[mvabund snowfall]; }; mgm = derive2 { name="mgm"; version="1.2-2"; sha256="0n0db6np7i0lycvis9pc1bsnzam4nrr9qzlwimz7d8pp7gm313xn"; depends=[glmnet Hmisc matrixcalc stringr]; }; mgpd = derive2 { name="mgpd"; version="1.99"; sha256="0cxpgza9i0hjm5w1i5crzlgh740v143120zwjn95cav8pk8n2wyb"; depends=[corpcor evd fields numDeriv]; }; mgraph = derive2 { name="mgraph"; version="1.03"; sha256="0av2c0jvqsdfb3i0s0498wcms0n2mm0z3nnl98mx2fy7wz34z8b2"; depends=[rgdal]; }; + mgsub = derive2 { name="mgsub"; version="1.0.0"; sha256="0aj00ch96kii1r053yqi8g44i64jdyigqnrzrwm6xsf1l2ms3v59"; depends=[]; }; mhde = derive2 { name="mhde"; version="1.0-1"; sha256="1q7lbj2is024f5rmfpdn3a0hsb78bf62ddal3chhnh3bi1z3jrjk"; depends=[]; }; mhsmm = derive2 { name="mhsmm"; version="0.4.16"; sha256="009dj0zkj1zry7jr9hf4cknb686z50a2l967if64xm0dvjmp7dgs"; depends=[mvtnorm]; }; mht = derive2 { name="mht"; version="3.1.2"; sha256="01zcaf9k0qayzm8dn5dvnm5n3qgqpj8r96qhqaa5vbjcr6ci2x2r"; depends=[glmnet Matrix]; }; @@ -8006,7 +8172,7 @@ in with self; { mi = derive2 { name="mi"; version="1.0"; sha256="1h47k5mpbvhid83277dvvj2di493bgzz9iarpyv3r30y219l7x1l"; depends=[arm Matrix]; }; miCoPTCM = derive2 { name="miCoPTCM"; version="1.0"; sha256="1lmf6zahfp59ylhdp2cbr7y3vayhim72zazimg4qfld4r9d6kygc"; depends=[distr MASS nleqslv survival]; }; miLineage = derive2 { name="miLineage"; version="2.0"; sha256="091wf4kwakdr91xkyg038f0vj941gvziy7yc4l8cylcjbr647qzz"; depends=[data_table geepack MASS]; }; - miRNAss = derive2 { name="miRNAss"; version="1.3"; sha256="12m55dv4kh0k8yvbr4qyj9z66i82z8d7ga4g89dfiwg09ydkdazf"; depends=[CORElearn Matrix Rcpp RSpectra]; }; + miRNAss = derive2 { name="miRNAss"; version="1.4"; sha256="0p852vyn44g84i4hzm7b02m5cxyqajnczx0s9x9373rn7fi6r98c"; depends=[CORElearn Matrix Rcpp RSpectra]; }; miRada = derive2 { name="miRada"; version="1.13.8-8"; sha256="1m6rm65pv4r16r0s5ih69nr3v2rnpsvpdpk07pi7k4f7v9wck71v"; depends=[]; }; miRtest = derive2 { name="miRtest"; version="1.8"; sha256="0i66s1sz7vf8p8ihfrxmag7wbkw8mlkldcp1w2figlzyhs74c85p"; depends=[corpcor GlobalAncova globaltest limma MASS RepeatedHighDim]; }; micEcon = derive2 { name="micEcon"; version="0.6-14"; sha256="1d3cdg36ighyhly5by9gl6lxkdvx2agb5cv2mf77pwwd7rpq35h3"; depends=[miscTools plm]; }; @@ -8015,40 +8181,41 @@ in with self; { micEconIndex = derive2 { name="micEconIndex"; version="0.1-6"; sha256="1ihly6qpyg1pms4nkvs6khxxqwr3fwg57i8pg0yhyy1apqxyj2xl"; depends=[miscTools]; }; micEconSNQP = derive2 { name="micEconSNQP"; version="0.6-6"; sha256="1n3pxapc90iz1w3plaqflayd0b1jqd65yw5nbbm9xz0ih132dby9"; depends=[MASS miscTools systemfit]; }; mice = derive2 { name="mice"; version="2.46.0"; sha256="1gjvlk67zvgipfczsca8zqk97vg3sivv82hblsdwp14s7smhjcax"; depends=[lattice MASS nnet Rcpp rpart survival]; }; - miceadds = derive2 { name="miceadds"; version="2.8-24"; sha256="0p6kfzf3c1cr4hr8azyy239wgkhclfiq2mxi7sfyvj713npbyin5"; depends=[CDM lme4 mice mitools mvtnorm Rcpp RcppArmadillo sirt TAM]; }; - micemd = derive2 { name="micemd"; version="1.1.0"; sha256="0y452xsrxdcb3kahya1f969lrf9lq9cv7zxsdf329x3q563lrcsm"; depends=[abind digest jomo lme4 MASS Matrix mice mvmeta mvtnorm nlme]; }; + miceExt = derive2 { name="miceExt"; version="1.0.0"; sha256="0rfmnrm04ir16zjbf6pfg25yxnyn5k47yiixp2k0vs86j1sf25v1"; depends=[mice RANN RANN_L1]; }; + miceadds = derive2 { name="miceadds"; version="2.9-15"; sha256="03jvs643cq23y5fj1ffilqr9bi7g4blk7c0bh7nvrpjx5sscqjck"; depends=[CDM lme4 MASS mice mitools mvtnorm Rcpp RcppArmadillo sirt TAM]; }; + micemd = derive2 { name="micemd"; version="1.2.0"; sha256="0l4qzhkxy43xwgfqp2c638fimixdrm94hgiabfds3sc1vbxma4r8"; depends=[abind digest jomo lme4 MASS Matrix mice mvmeta mvtnorm nlme]; }; micompr = derive2 { name="micompr"; version="1.0.2"; sha256="1hmxi5wz7vfnvawh50zk316gr3ry59m820ddj2v9p7cxq21hwv9i"; depends=[]; }; microPop = derive2 { name="microPop"; version="1.3"; sha256="072qldi020m84j9crfvzvw2nzn5fagqmjjzb7g7i70zwqhl1kjsa"; depends=[deSolve]; }; microbats = derive2 { name="microbats"; version="0.1-1"; sha256="1mahvblaiwg1xk2s34wd1ic8ddc9lh6g0azik2pd97bsf0krkyw8"; depends=[]; }; - microbenchmark = derive2 { name="microbenchmark"; version="1.4-2.1"; sha256="0qn5r1a6qidghcisc2hpbdmj62pnixc3zz6p4ipk8mvakf0hdsvg"; depends=[ggplot2]; }; + microbenchmark = derive2 { name="microbenchmark"; version="1.4-4"; sha256="0fv2w2vsiz18imf4115nd9chhmf275w2mb49pn7pkxi6z3bamc9c"; depends=[]; }; microclass = derive2 { name="microclass"; version="1.1"; sha256="0hl2s4135k187f0vqmj9snvmnwa5k9fg8ahivfs7ciknrcxfv3nk"; depends=[microcontax microseq Rcpp RcppEigen RcppParallel]; }; microcontax = derive2 { name="microcontax"; version="1.0"; sha256="0l5mfgda5xagjbh9bwv328k3m7kgggdm90rc8fr1ic59hvg56f3g"; depends=[microseq]; }; - microdemic = derive2 { name="microdemic"; version="0.1.0"; sha256="0sywdgxldmlin3bdns8549xlngn6qm6rql2avb2m5z7w4q7ql4d5"; depends=[crul data_table jsonlite tibble]; }; - micromap = derive2 { name="micromap"; version="1.9.2"; sha256="1x4v0ibbpfz471dp46agib27i4svs8wyy93ldriryvhpa2w5948y"; depends=[ggplot2 maptools RColorBrewer rgdal sp]; }; + microdemic = derive2 { name="microdemic"; version="0.2.0"; sha256="0g39j9bdfcv90332g9mp7khn15vqs0fzqx38criw4rxwi8dcd307"; depends=[crul data_table jsonlite tibble]; }; + micromap = derive2 { name="micromap"; version="1.9.3"; sha256="1iciwy0kcg4qa0xc4gkqcilq33ac1s184vw13cbbkv0d1b5cgkgv"; depends=[ggplot2 maptools RColorBrewer rgdal sp]; }; micromapST = derive2 { name="micromapST"; version="1.1.1"; sha256="15ch132x3wnpf7rmy25nah7iyfxfk90p7lvavqjhrnavhjsfxbxx"; depends=[labeling RColorBrewer stringr]; }; - micropan = derive2 { name="micropan"; version="1.1.2"; sha256="0rvaampr5vlpz253lhy330380646g2vqj1hqp6gsk0gp0hdlkd7g"; depends=[igraph microseq]; }; - microplot = derive2 { name="microplot"; version="1.0-16"; sha256="144rj86lkjkmwlqwlwmnagvlknhg0wg92kabpfpz2w0swfhfa742"; depends=[Hmisc]; }; - microseq = derive2 { name="microseq"; version="1.2"; sha256="14w1fycw0jgrc5g0ygks9j28hy37li057qf097qnp18w05jk3hws"; depends=[Rcpp]; }; + micropan = derive2 { name="micropan"; version="1.2"; sha256="1b3hd5c6l9njns372zhqfryibrpqmrjxmc1p5gzdwm7450cs7qky"; depends=[BH igraph microseq Rcpp]; }; + microplot = derive2 { name="microplot"; version="1.0-25"; sha256="05b29l5s4g4yvprxsla28ykr4823lfhqlxm46p406p06r9wki3d7"; depends=[ggplot2 HH Hmisc htmltools lattice ReporteRs]; }; + microseq = derive2 { name="microseq"; version="1.2.2"; sha256="1h828iviraqrm43lhd0s3r7rdlakc6yfc6ngrcrkacpflfcmx3c7"; depends=[Rcpp]; }; midas = derive2 { name="midas"; version="1.0.1"; sha256="1alqxk23651jnkg0xn4rpvk71z5rhvx3y0wjrgkw2qw95s7jjn72"; depends=[shiny xml2]; }; midasr = derive2 { name="midasr"; version="0.6"; sha256="1sg6m36jg3b6znfg97ln5a6b4z36xkyjvgxk7wmqdq3h528z8613"; depends=[forecast MASS Matrix numDeriv optimx sandwich]; }; midastouch = derive2 { name="midastouch"; version="1.3"; sha256="1pjzcf0hjfhr5p0la8pz1njw7bhfrcrzpqfsdqk2z5c6dbh4awzq"; depends=[]; }; midrangeMCP = derive2 { name="midrangeMCP"; version="1.3"; sha256="1733dlhzbgrjdzd88rh9dkqhxh05gr078sbmihab7whbrpsq8068"; depends=[SMR WriteXLS xtable]; }; - migest = derive2 { name="migest"; version="1.7.3"; sha256="1g49b4fa2974w8alb97k06k3zi49q66n16cvcbqdaj9j21c9qfmy"; depends=[]; }; + migest = derive2 { name="migest"; version="1.7.4"; sha256="0v47qnhk48dh1vvw0b9d4z1l7iv09h47b0vh9f3s3pryn076vn9q"; depends=[]; }; migration_indices = derive2 { name="migration.indices"; version="0.3.0"; sha256="0h0yjcj70wzpgrv3wl1f2h2wangh1klsllq0i0935plgzw736mwd"; depends=[calibrate]; }; migui = derive2 { name="migui"; version="1.1"; sha256="1qchjsc7ff2b6s9w6ncj9knjv6pyp90jd4jxljn2rr1ix1gc45za"; depends=[arm gWidgets2 mi]; }; - miic = derive2 { name="miic"; version="1.0"; sha256="1jfj5m97bzbw8r128d14mp9kiavhxd8diazgh3qijxn52pyizln4"; depends=[bnlearn igraph MASS ppcor Rcpp]; }; + miic = derive2 { name="miic"; version="1.0.3"; sha256="088szscn9v9279w86mypxphp3avv17iijvcvlckx3h1ka75lkx27"; depends=[bnlearn igraph MASS ppcor Rcpp]; }; milr = derive2 { name="milr"; version="0.3.0"; sha256="0z4d22fd6gd3zbi973vws9jqyh4c4m4i4ajcpxv934vxmbj0cma9"; depends=[glmnet numDeriv pipeR Rcpp RcppArmadillo RcppParallel]; }; mime = derive2 { name="mime"; version="0.5"; sha256="0i91m3ivaja1k33jwcvz16pfjypkci27awm8glil7sxhmwaj3izw"; depends=[]; }; minPtest = derive2 { name="minPtest"; version="1.7"; sha256="088kckpbfy2yp0pk3zrixrimywrvkaib5ywa7fkr5phnzlsl80sv"; depends=[Epi scrime]; }; mindr = derive2 { name="mindr"; version="1.1.0"; sha256="102r7m6jiadgmkw4w7535ba2qfxknj00y4b9hhawcjqm5v67jipz"; depends=[htmlwidgets]; }; minerva = derive2 { name="minerva"; version="1.4.7"; sha256="19snlbnk4y0lj7kfypa2g1d1s7bl3xkrxabn8p15hlwwcfb0x7vm"; depends=[]; }; - miniCRAN = derive2 { name="miniCRAN"; version="0.2.10"; sha256="1hry3w3p7gd8vih1lz7g41zd1p85bqr0397llwd9lj1cwibkhhgd"; depends=[httr igraph magrittr XML]; }; + miniCRAN = derive2 { name="miniCRAN"; version="0.2.11"; sha256="1ffc367ipcxyk2a8f2y46xa01rbr5254cryf1qzzfflb3xj8n6pa"; depends=[httr igraph XML]; }; miniGUI = derive2 { name="miniGUI"; version="0.8.0"; sha256="1iq52x7wbcin7ya207jj3k9vym7mavm5z61vggyabdmr768pci39"; depends=[]; }; miniUI = derive2 { name="miniUI"; version="0.1.1"; sha256="1qfca55phw6614qh5ligvqawpyvpb08x7ky44sffwxgff4h074lw"; depends=[htmltools shiny]; }; minimalRSD = derive2 { name="minimalRSD"; version="1.0.0"; sha256="1p1jpi8lnv952k4c1wjgbgpb0hv4zg0f9qrd43cx0caibkqvhzf7"; depends=[]; }; minimap = derive2 { name="minimap"; version="0.1.0"; sha256="0y5yzic9pwpzs01gnl82syankijcjp85n22jn5zda0bp3y01r53r"; depends=[]; }; minimax = derive2 { name="minimax"; version="1.0"; sha256="1g0d9q5h1avbb0yg7ajw5330820i3n5cgkpsif754l4j3ikya8p3"; depends=[]; }; - minimaxdesign = derive2 { name="minimaxdesign"; version="0.1.2"; sha256="0sbycipns8nx63lp0426b9fwmlq3lprb9j3cfry7a1ibfkw63qf9"; depends=[DiceDesign doParallel doSNOW foreach gtools MaxPro nloptr randtoolbox Rcpp RcppArmadillo]; }; + minimaxdesign = derive2 { name="minimaxdesign"; version="0.1.3"; sha256="0jxfvlsjd6bippjziplpgvpbnwd816dx2kf3gj32xmfwzminjx5f"; depends=[DiceDesign doParallel doSNOW foreach gtools jpeg MaxPro nloptr randtoolbox Rcpp RcppArmadillo]; }; minimist = derive2 { name="minimist"; version="0.1"; sha256="007y829d766b1v6wkrhk7pkg99r38bvmhc8bwvs8rs13dr7444ln"; depends=[V8]; }; minpack_lm = derive2 { name="minpack.lm"; version="1.2-1"; sha256="18ym2pdql5vzngc7q5gn66d153hrfrnd8ilv8yh6vd7j7sx7vjql"; depends=[]; }; minqa = derive2 { name="minqa"; version="1.2.4"; sha256="036drja6xz7awja9iwb76x91415p26fb0jmg7y7v0p65m6j978fg"; depends=[Rcpp]; }; @@ -8056,10 +8223,10 @@ in with self; { minval = derive2 { name="minval"; version="0.8"; sha256="05yqr2b5x17kpp4661x6p4pjszmvz2bad43z8m3qnvaa29zhd3n3"; depends=[]; }; minxent = derive2 { name="minxent"; version="0.01"; sha256="1a0kak4ff1mnpvc9arr3sihp4adialnxxyaacdgmwpw61wgcir7h"; depends=[]; }; mipfp = derive2 { name="mipfp"; version="3.1"; sha256="18cfv8s38cd0g1wc5pry6a4m2ykqflkxhqbqnjbjvmr42bj3r6sp"; depends=[cmm numDeriv Rsolnp]; }; - mirt = derive2 { name="mirt"; version="1.26.1"; sha256="11p8434kyr27vfacgscmmx0jgmb10sgzyhcjrjpr3md837xv56j2"; depends=[GPArotation lattice mgcv Rcpp RcppArmadillo vegan]; }; + mirt = derive2 { name="mirt"; version="1.26.3"; sha256="1jzvxcq7s179vi5cwrxkcqzffl2pyay5abnvlgazhabzf4150sml"; depends=[GPArotation lattice mgcv Rcpp RcppArmadillo vegan]; }; mirtCAT = derive2 { name="mirtCAT"; version="1.6.1"; sha256="00jy27ilv1fw9ijhcyyi2lnxghyjb0dhpcqf1dqc6wi61wf5pagk"; depends=[lattice lpSolve markdown mirt pbapply Rcpp RcppArmadillo shiny]; }; misc3d = derive2 { name="misc3d"; version="0.8-4"; sha256="0qjzpw3h09qi2gfz52b7nhzd95p7yyxsd03fldc9wzzn6wi3vpkm"; depends=[]; }; - miscF = derive2 { name="miscF"; version="0.1-3"; sha256="1djmsffwkicj25ndg07dnid6qj66b1rdw0yrv79jakjfbv71c13i"; depends=[BayesBridge BRugs MASS MCMCpack mvtnorm R2jags Rcpp RcppArmadillo]; }; + miscF = derive2 { name="miscF"; version="0.1-4"; sha256="1kvkbvrmaqclwdfghkrsmnzb6xbi97icay2wwb7k5m34xhx4ha82"; depends=[MASS MCMCpack mvtnorm R2jags]; }; miscFuncs = derive2 { name="miscFuncs"; version="1.2-10"; sha256="1kqya581n76ff9avhj6xm6nwsbw7zlm4mwy0vyvdlqlf7c381qq0"; depends=[mvtnorm roxygen2]; }; miscTools = derive2 { name="miscTools"; version="0.6-22"; sha256="1sngkl5rwg1vp2xx9a5g2nz2nhwxwv7ni21ww7hyjc8x5mhb42yh"; depends=[]; }; misclassGLM = derive2 { name="misclassGLM"; version="0.2.0"; sha256="1dz36q2gl0q8d0s2rxn28b8ykw31wcdxf91s7ypmjggfdj64i8br"; depends=[bigmemory foreach MASS Matrix mlogit numDeriv ucminf]; }; @@ -8071,7 +8238,7 @@ in with self; { missForest = derive2 { name="missForest"; version="1.4"; sha256="0y02dhrbcx10hfkakg5ysr3kpyrsh2d9i5b0qzhj9x5x0d5q11gp"; depends=[foreach itertools randomForest]; }; missMDA = derive2 { name="missMDA"; version="1.11"; sha256="185ia5zg5gdrkjpj5sql46lz5svw77wjy9zplpqhrmgx43fv0w0i"; depends=[FactoMineR mice mvtnorm]; }; missRanger = derive2 { name="missRanger"; version="1.0.0"; sha256="0advj6a57pj79xn43gxp7ll4b3y7hl5cvz5d7hw69f4yk4blwkjr"; depends=[FNN ranger]; }; - mistat = derive2 { name="mistat"; version="1.0-4"; sha256="0gzng0kl3handy3k7g62c4sdcf9l6x0b69jxmfrwfd4297f57n9n"; depends=[]; }; + mistat = derive2 { name="mistat"; version="1.0-5"; sha256="1vyx918b7iv1wcnk23bnlxljwy0hglpdx5drhrs5qcd45f6jrghc"; depends=[]; }; mistral = derive2 { name="mistral"; version="2.1.0"; sha256="1cr79p8q82lpj9d0y6q24xmfkxmnlqv8ivkd0baj7fxfb1nb8sak"; depends=[DiceKriging doParallel e1071 emoa foreach ggplot2 iterators Matrix mvtnorm quadprog]; }; mitml = derive2 { name="mitml"; version="0.3-5"; sha256="1s888r9y2ri39b48h1iypps6lddqkqv3g31l2sjmi2pvyccfpkwb"; depends=[haven jomo pan]; }; mitools = derive2 { name="mitools"; version="2.3"; sha256="0w76zcl8mfgd7d4njhh0k473hagf9ndcadnnjd35c94ym98jja33"; depends=[]; }; @@ -8087,10 +8254,9 @@ in with self; { mixdist = derive2 { name="mixdist"; version="0.5-4"; sha256="100i9mb930mzvdha31m1srylmpa64wxyjv6pkw1g5lhm1hsclwm3"; depends=[]; }; mixedMem = derive2 { name="mixedMem"; version="1.1.0"; sha256="0j8w3qfhanyrkkxipdxfdajv15qba8r2rm06iiv3kywficzgkxgv"; depends=[BH gtools Rcpp RcppArmadillo]; }; mixedsde = derive2 { name="mixedsde"; version="3.0"; sha256="1libm4pyzfqi11hcx823qdhgshdsy84dzv7jhz3b89w9bkla5l17"; depends=[MASS moments plot3D sde]; }; - mixer = derive2 { name="mixer"; version="1.8"; sha256="1r831jha7qrxibw5m3nc3l6r887ihzxzsj65yjnbl5cf5b8y19bb"; depends=[]; }; mixexp = derive2 { name="mixexp"; version="1.2.5"; sha256="0nbf10xhrr51rb1b2apcj4p3ci8xbi7flgz500ar3mxh8h8l74sq"; depends=[daewr gdata lattice]; }; mixlink = derive2 { name="mixlink"; version="0.1.5"; sha256="0ywgrcplhspc0x5fniw52xqz20y7j9mwgy4ky8lv3vii659mr52m"; depends=[mvtnorm numDeriv Rcpp RcppGSL]; }; - mixlm = derive2 { name="mixlm"; version="1.2.2"; sha256="1za45p1i7753phd7nclvnlhkh79xjmnfzq1l18afsil0kv9my1is"; depends=[car leaps multcomp pls pracma]; }; + mixlm = derive2 { name="mixlm"; version="1.2.3"; sha256="0i7nrn31yaicdpwfssnid1x8w51iv17lcl96zfr1pgrf97d7gkqd"; depends=[car leaps multcomp pls pracma]; }; mixor = derive2 { name="mixor"; version="1.0.3"; sha256="1qnrfd0hggad81rn8ryfm9l0cpd59ifj9sxc1bav35bma535azdv"; depends=[]; }; mixpack = derive2 { name="mixpack"; version="0.3.6"; sha256="0q19mal86qlriwilabgy3sn33iymi5hl3wa33kvb8cd1dgdmjr7a"; depends=[mvtnorm Rcpp RcppArmadillo]; }; mixreg = derive2 { name="mixreg"; version="0.0-5"; sha256="0wsb1z98ymhshw9nhsvlszsanflxv3alwpdsw8lr3v62bkwka8zr"; depends=[]; }; @@ -8099,21 +8265,23 @@ in with self; { mixtNB = derive2 { name="mixtNB"; version="1.0"; sha256="0lqbm1yl54zfs0xcmf3f2vcg78rsqyzlgvpydhmhg7x6dkissb22"; depends=[]; }; mixtools = derive2 { name="mixtools"; version="1.1.0"; sha256="13wdm0xs5bakhpa8ypg6lvhjaqkxyabwz4glxdwn0jwdvkcdhgsl"; depends=[MASS segmented survival]; }; mixtox = derive2 { name="mixtox"; version="1.3.2"; sha256="0mdnp1yrcxvan5l7jj91s41vq5y1kdnkhhinqrklmg4ph5f29dmq"; depends=[minpack_lm]; }; - mixture = derive2 { name="mixture"; version="1.4"; sha256="0k9pzcgfjyp0rmcma26kr2n8rcwmijznmdpvqidgl3jay20c87ca"; depends=[]; }; + mixture = derive2 { name="mixture"; version="1.5"; sha256="1ahr8jw93xnd5hmy3h4sr209ql7gmkwbvnnfmiplbpc17czqgcn4"; depends=[]; }; mize = derive2 { name="mize"; version="0.1.1"; sha256="18mnpwwbwlyx0ixsjqai28ahp4g0wncv8c5qwy17xq2zbhwlq3jh"; depends=[]; }; - mizer = derive2 { name="mizer"; version="0.2"; sha256="0cpal9lrjbvc923h499hbv4pqw3yjd4jvvhgayxgkak2lz2jzmcz"; depends=[ggplot2 plyr reshape2]; }; + mizer = derive2 { name="mizer"; version="0.4"; sha256="0ir6hx3fb4lkfgg7dln96fd50fr4jdrxbqp70461fsyzi3lxn6nv"; depends=[ggplot2 plyr Rcpp reshape2]; }; mkde = derive2 { name="mkde"; version="0.1"; sha256="04v84arpnmjrkk88ffphnhkz32x7y0dypk75jfmbbgcgv59xlglv"; depends=[raster Rcpp sp]; }; - mkin = derive2 { name="mkin"; version="0.9.46.3"; sha256="145lqb9aiq08r0g645r7n01fkryndb2gczmlk585ddjqvjjppba2"; depends=[deSolve FME inline minpack_lm R6 rootSolve]; }; + mkin = derive2 { name="mkin"; version="0.9.47.1"; sha256="1cz6f9122im594dvqdmdm9yjlnmwzrx2ka63dgj0zf1ysqzf0872"; depends=[deSolve FME inline minpack_lm R6 rootSolve]; }; mkssd = derive2 { name="mkssd"; version="1.1"; sha256="1qqzy6fn6sc3lxahc19hzzf1hzxsyvxqi7npynw0vkknlrvh2ijp"; depends=[]; }; mlDNA = derive2 { name="mlDNA"; version="1.1"; sha256="0d9lydiwar98hin26slnym4svn0g1xmyn212vvzsx9lzlvs5a9k4"; depends=[e1071 igraph pROC randomForest ROCR rsgcc snowfall]; }; mlPhaser = derive2 { name="mlPhaser"; version="0.01"; sha256="1s2mqlnbcjdkx0ghvr2sw9rzggqa4jy2vzi9vbyqkh6795lgck6n"; depends=[]; }; mlVAR = derive2 { name="mlVAR"; version="0.4"; sha256="08iaq6wq0ngd60nhmlj8c0x8r1fal1zfv2zpd6ll54szcvdbxahr"; depends=[abind arm clusterGeneration corpcor dplyr lme4 MplusAutomation mvtnorm plyr qgraph]; }; + mlapi = derive2 { name="mlapi"; version="0.1.0"; sha256="023vk5bp8cjcq88sapkl87kdxr92bay1dyxl6xirnyj699pyj51k"; depends=[Matrix R6]; }; mlbench = derive2 { name="mlbench"; version="2.1-1"; sha256="1rp035qxfgh5ail92zjh9jh57dj0b8babw3wsg29v8ricpal30bl"; depends=[]; }; - mldr = derive2 { name="mldr"; version="0.3.22"; sha256="0q5dpqx6zapawjjq8rqk112w5qsk7r6sc90y63yvllk9yhdgygyw"; depends=[circlize shiny XML]; }; + mlbgameday = derive2 { name="mlbgameday"; version="0.0.1"; sha256="1w0rzdbldsv1440vjnx9g2jz6b458gxsk55lmc8n8x16wz45cd2b"; depends=[DBI doParallel dplyr foreach iterators magrittr purrr stringr xml2]; }; + mldr = derive2 { name="mldr"; version="0.4.0"; sha256="1nx21yyxfaiyxpbjkc5sif6pis5v2skisxcxdqk4479h54qzwlj3"; depends=[circlize shiny XML]; }; mldr_datasets = derive2 { name="mldr.datasets"; version="0.4.0"; sha256="0kbfaf39vkhvscw47bkx2mmc6cmgwz1cys62iiw3yb6kvkzddr3s"; depends=[]; }; mle_tools = derive2 { name="mle.tools"; version="1.0.0"; sha256="02yndj1if31zr9y805mq5km5n8jz4w9jz1bmaz9nnqsqimrnigrb"; depends=[]; }; mlearning = derive2 { name="mlearning"; version="1.0-0"; sha256="0r8xfaxw83s2r27b8x5qd0k4r5ayxpkafzn9b1a0jvsr87i6520r"; depends=[class e1071 ipred MASS nnet randomForest]; }; - mlegp = derive2 { name="mlegp"; version="3.1.4"; sha256="1932544irhzhf6a8rjyh66j57h9awlhwd6xam603bamfg106cmg2"; depends=[]; }; + mlegp = derive2 { name="mlegp"; version="3.1.6"; sha256="12w6gw1g1xn3i42pgall09w5im8gf84h28d3fa9m3fhkifkid2db"; depends=[]; }; mleur = derive2 { name="mleur"; version="1.0-6"; sha256="0mddphq3b6y2jaafaa9y41842kcaqdl3dh7j4pva55q2vcjcclj7"; depends=[fGarch lattice stabledist urca]; }; mlgt = derive2 { name="mlgt"; version="0.16"; sha256="1nvdq6mvgr39ikkf73aggsb6pmbw132injj8fdkr8hgcmwm6lgd9"; depends=[seqinr]; }; mlica2 = derive2 { name="mlica2"; version="2.1"; sha256="0c3m1zd9x99n6lw12hfzmd59355z51xa8rhg1h7qwfn9p86r826f"; depends=[]; }; @@ -8121,20 +8289,20 @@ in with self; { mlmRev = derive2 { name="mlmRev"; version="1.0-6"; sha256="0mvmahnbbp478xwldj4wlsjib4v4afhs07643gxgcqpi56zbd5h7"; depends=[lme4]; }; mlma = derive2 { name="mlma"; version="4.0-1"; sha256="0pk2h4m74r95dfkqzliixi6z1rwdfc6gbz8c3162y22m919f00vc"; depends=[car gplots lme4]; }; mlmc = derive2 { name="mlmc"; version="1.0.0"; sha256="01h7w0ajyg3bccynlpbi3yjpy089wczbfbajpg6yw5v4dppw7k7a"; depends=[ggplot2 Rcpp]; }; - mlmm = derive2 { name="mlmm"; version="1.0"; sha256="0n99pjfg60ds14v636h9j77hhdvl9klynpw0wv61020vbmhn22b0"; depends=[BH ggplot2 MASS Matrix Rcpp RcppEigen rstan rstantools StanHeaders]; }; mlmmm = derive2 { name="mlmmm"; version="0.3-1.2"; sha256="1m5ziiqs3ll1xjm1yf7x4sdc910jypn3kjnbadf95xxkvqmfrsqq"; depends=[]; }; mlogit = derive2 { name="mlogit"; version="0.2-4"; sha256="15ndly7i56k8blgvpn15ixxnqx9yvbci7n3mb3hm9mnrxwh5v7sx"; depends=[Formula lmtest MASS maxLik statmod zoo]; }; mlogitBMA = derive2 { name="mlogitBMA"; version="0.1-6"; sha256="1wl8ljh6rr1wx7dxmd1rq5wjbpz3426z8dpg7pkf1x9wr94a2q25"; depends=[abind BMA maxLik]; }; mlr = derive2 { name="mlr"; version="2.11"; sha256="1fs62xzxgk75k3b4wkxh2qkij03m5i1bbmacgffwq4xak3mr64ma"; depends=[backports BBmisc checkmate data_table ggplot2 parallelMap ParamHelpers stringi survival]; }; - mlrMBO = derive2 { name="mlrMBO"; version="1.1.0"; sha256="1858a01qb531s1bylvmlkl10f41azwiwx8jy1033ycv6llqjgs3a"; depends=[backports BBmisc checkmate data_table lhs mlr parallelMap ParamHelpers smoof]; }; + mlrMBO = derive2 { name="mlrMBO"; version="1.1.1"; sha256="1r6p5ph7nyqs6cqqsg04mass1zppys75n8448lv6iadlm499jzg8"; depends=[backports BBmisc checkmate data_table lhs mlr parallelMap ParamHelpers smoof]; }; mlsjunkgen = derive2 { name="mlsjunkgen"; version="0.1.1"; sha256="109ag52x4y3rzx8yccilrnl24mz4ximzx6v4lrbak7dpiclqrw7a"; depends=[]; }; - mlt = derive2 { name="mlt"; version="0.2-0"; sha256="09pvqyyzlb76x47v2lbgsdrld0z0r1v3c29q3a0dsx62ia367mqr"; depends=[alabama basefun BB numDeriv quadprog sandwich survival variables]; }; - mlt_docreg = derive2 { name="mlt.docreg"; version="0.2-0"; sha256="1n23bjfjacyq7b9n47ai9is8p0ka6m36085c0q1i47zpz5kv6d5k"; depends=[mlt numDeriv]; }; - mltools = derive2 { name="mltools"; version="0.3.3"; sha256="0r2i46hkzckgl3ly7sdzkzi94bwzkni2rqyrz647r5rhjqhfgkhj"; depends=[data_table Matrix]; }; + mlt = derive2 { name="mlt"; version="0.2-1"; sha256="0ir792clkfzvxl2w1r0akbp7isi7jspq3blhkrzh2rsf15x48fha"; depends=[alabama basefun BB numDeriv quadprog sandwich survival variables]; }; + mlt_docreg = derive2 { name="mlt.docreg"; version="0.2-1"; sha256="08va5gfsl71ijrrij0kyr7icjbpfm0wxfvp0554sxvmca75bqqcl"; depends=[mlt numDeriv]; }; + mltools = derive2 { name="mltools"; version="0.3.4"; sha256="18dxhims684a6fk44nrzdnry8dpxs69wim8kd7zamp8zdhy38kyy"; depends=[data_table Matrix]; }; mlxR = derive2 { name="mlxR"; version="3.2.0"; sha256="1a0104h4b0qag20xv5sg8m4b0ndvz843lnc4jypfxns3bi5k4v1m"; depends=[ggplot2 Rcpp XML]; }; - mma = derive2 { name="mma"; version="5.0-1"; sha256="02y8fahaz3lxix9cg9sxpyap441k1az9bf1zadqzx8mvw510ixvs"; depends=[car doParallel foreach gbm gplots survival]; }; + mma = derive2 { name="mma"; version="6.0-0"; sha256="1wb6d8943yfi85d6s1bk8j853lkni4yk876pnjziq16x93lgkjsv"; depends=[car doParallel foreach gbm gplots plotrix survival]; }; mmand = derive2 { name="mmand"; version="1.5.3"; sha256="1n0h7nia9jjc11g8417nfd3wsg4m3bmblm9bsjd0b52vqxhpxmzh"; depends=[Rcpp]; }; mmap = derive2 { name="mmap"; version="0.6-15"; sha256="0p3dsq0vffb0x0i8xh8p1r0b2hwk4zfi6nbwsi3cyaj1m7dzm0fh"; depends=[]; }; + mmapcharr = derive2 { name="mmapcharr"; version="0.1.0"; sha256="0szabsacbqm51jw4q4pg304vvgqsqna5c7q1sh3f54za6dddmyxw"; depends=[BH Rcpp]; }; mmc = derive2 { name="mmc"; version="0.0.3"; sha256="03nhfhiiadga8mcp33kj20g33v9n5i62fdqgi20h5p80g849k719"; depends=[MASS survival]; }; mmcm = derive2 { name="mmcm"; version="1.2-6"; sha256="0lk2lk8j4hq6shw3vpq53gvh2w1gwkayvgfny4i04k5fglbwivg7"; depends=[mvtnorm]; }; mmds = derive2 { name="mmds"; version="1.1"; sha256="0f5qzkfhi7vg8vsd8r41idmbwrrgc7qzfnp81adms2yzrza17wrw"; depends=[]; }; @@ -8144,7 +8312,7 @@ in with self; { mmm = derive2 { name="mmm"; version="1.4"; sha256="1nydian004nldqhyw3x15w6qfml2gkjc0x8ii54faz563byjv3d8"; depends=[gee]; }; mmm2 = derive2 { name="mmm2"; version="1.2"; sha256="1h9pn5s3jjs4bydrr1qysjb4hv7vs4h3m7mvi22ggs2dzyz3b298"; depends=[gee]; }; mmod = derive2 { name="mmod"; version="1.3.3"; sha256="1dz6887mlqbagjj98wcabmxj9hvsz8pgsizy1fqkwjhhs44c62y4"; depends=[adegenet pegas]; }; - mmpf = derive2 { name="mmpf"; version="0.0.3"; sha256="0mwsnhz1f62l8msisz9m1aln7w24rg9844bxh07g2y7sa29ls1lp"; depends=[checkmate data_table]; }; + mmpf = derive2 { name="mmpf"; version="0.0.4"; sha256="1lskpnhqiimf7ch5xg5f0mpvhxy18a5w9daxpp4133vx1dydm4c2"; depends=[checkmate data_table]; }; mmpp = derive2 { name="mmpp"; version="0.6"; sha256="16aypjf4i0ya3qgxqrrg8y0xbnq1pnqky1dpkgln5q494hphyg91"; depends=[]; }; mmppr = derive2 { name="mmppr"; version="0.1"; sha256="0fswkqcw0xkqd9gmqabb61i32zscp5jzfx0z43wq7mrlwynryylv"; depends=[expm reshape2]; }; mmtfa = derive2 { name="mmtfa"; version="0.1"; sha256="113bpcb05i78y78byrdn9j45dfcar7q8z7qmlid8cl6b8cjv1vfz"; depends=[matrixStats mvnfast]; }; @@ -8154,6 +8322,7 @@ in with self; { mnormpow = derive2 { name="mnormpow"; version="0.1.1"; sha256="0z53vwhkhkkr6zrjhd3yr14mb02vh7lr63frf0ivajndxiap0s9v"; depends=[]; }; mnormt = derive2 { name="mnormt"; version="1.5-5"; sha256="1b34xxrnf35khsx82mhvmk96sgfr2flyasaah7qkb2976pwxay7z"; depends=[]; }; mnreadR = derive2 { name="mnreadR"; version="1.2.0"; sha256="0ymkwbfrba5nnnvi3s52fdhzva7qd0b7ab75j1m0s2i546cbwv9l"; depends=[dplyr ggplot2]; }; + mobForest = derive2 { name="mobForest"; version="1.3.0"; sha256="0gzn3lyi9ph5dcrfbw4xs4rkf5ngf28abf1n8vap96fdhc6nmg88"; depends=[modeltools party sandwich strucchange zoo]; }; mobsim = derive2 { name="mobsim"; version="0.1.0"; sha256="077hw1162giwc90y5dvj9052i5hxdf2ii29m9q8ky028375dsd0f"; depends=[Rcpp sads vegan]; }; mockery = derive2 { name="mockery"; version="0.4.1"; sha256="1h8976rlwykpqrh2p6x3bcyxdhlhcwsi1wvkdk08k6hynbw877cm"; depends=[testthat]; }; mockr = derive2 { name="mockr"; version="0.1"; sha256="0340v6189ivlzzriwk7yhf3v2k651x05fd1xrqfxxjgwhysaqj6z"; depends=[lazyeval]; }; @@ -8165,53 +8334,54 @@ in with self; { modcmfitr = derive2 { name="modcmfitr"; version="0.1.0"; sha256="1d6fi7pc10w2a97h1prhkg5cvzmxjp11c5bwrz90zry0m8anwjyh"; depends=[gtools nloptr]; }; modeest = derive2 { name="modeest"; version="2.1"; sha256="0l4y7yhkgsxycdd2lck0g8g6k2r059hwlrrcpl46md3rva4jgbnp"; depends=[]; }; modehunt = derive2 { name="modehunt"; version="1.0.7"; sha256="0qz9kmf1qfs2dr7kzm9l7ac0h5rvi3b9j9896p991sk4bcalsl0b"; depends=[]; }; + model4you = derive2 { name="model4you"; version="0.9-1"; sha256="13ask2hcrw2r6qq4yz6wm2nsj2iwinnn0w78lj11fdrsj5cymnqv"; depends=[Formula ggplot2 gridExtra partykit sandwich survival]; }; modelObj = derive2 { name="modelObj"; version="3.0"; sha256="0wc67zsh26zyr7x9s229g2mppfk6g6z12j74zj2bdhk2m7i2x3zq"; depends=[]; }; modelfree = derive2 { name="modelfree"; version="1.1-1"; sha256="0ammka2wxx90z31zfzypw9dk5n118l0vxhykxbx6srfig2vdyn82"; depends=[PolynomF SparseM]; }; modelr = derive2 { name="modelr"; version="0.1.1"; sha256="1rqw0b583vp107zqp4h3wj51dvv4hb3wszfr1f5f48xassc53f95"; depends=[broom dplyr lazyeval magrittr purrr tibble tidyr]; }; modeltools = derive2 { name="modeltools"; version="0.2-21"; sha256="0ynds453xprxv0jqqzi3blnv5w6vrdww9pvd1sq4lrr5ar3k3cq7"; depends=[]; }; modelwordcloud = derive2 { name="modelwordcloud"; version="0.1"; sha256="0ardib0h923i7jk8bgcq6pn2zazx9acf9sdggifsk46hdz8hvqnm"; depends=[]; }; + moderndive = derive2 { name="moderndive"; version="0.1.1"; sha256="11xxklaqizlx36nyx3nzj9xkszg99qsmjqmr59z235h4wkrw8xg3"; depends=[assertive broom dplyr formula_tools janitor knitr magrittr rlang stringr tibble]; }; modes = derive2 { name="modes"; version="0.7.0"; sha256="185qjrmz2sj0l5931g4d3kx3jpgjn4rf4lln84h6g97prk1ykqmj"; depends=[]; }; modest = derive2 { name="modest"; version="0.3-1"; sha256="07rs014hdcabp2n0gg14pz2gmqgbw38vjv7a80vkzzh3601hxqws"; depends=[knitr rhandsontable shiny shinyBS]; }; - modeval = derive2 { name="modeval"; version="0.1.3"; sha256="10yjba2dlwrgd3ycw10y1sa3xdxf2spq829bbxwfissc5l9gk48x"; depends=[caret dplyr e1071 ggplot2 gridExtra knitr magrittr mlbench ModelMetrics psych purrr stringr tibble]; }; modifiedmk = derive2 { name="modifiedmk"; version="0.1.1"; sha256="1hn079nxgn1h8p89r93g8zxhpr0l6x9c6jzvvs8wmyvh7s9yahla"; depends=[]; }; modiscloud = derive2 { name="modiscloud"; version="0.14"; sha256="0vwhfp50yb21xkanvzk983vk0laflv60kj1ybx3fydfljwqx0rwj"; depends=[date raster rgdal sfsmisc sp]; }; - modmarg = derive2 { name="modmarg"; version="0.9.0"; sha256="0mjrrw6jpdmy826jr29vp3hyzqrn5gscqq5d7r21yggqp2ahzdkk"; depends=[]; }; + modmarg = derive2 { name="modmarg"; version="0.9.2"; sha256="1clyfvn5k87nyh5cj4b0yi2zkavwvnirhlirxkzi8m2qijdl9vgh"; depends=[]; }; moduleColor = derive2 { name="moduleColor"; version="1.08-3"; sha256="183l968l49b7jbmvsjjnmk1xd36cpjkp777c00gw1f73h6nb2na8"; depends=[dynamicTreeCut impute]; }; modules = derive2 { name="modules"; version="0.6.0"; sha256="0nzypmx8p84dd7pdw7ilrjrc2nji5qzwylb9yn1zmr8wp5lzvidc"; depends=[stringr]; }; modygliani = derive2 { name="modygliani"; version="1.0"; sha256="01g96cdm4hgbsh6xsdfjg7vp7zb138sxwgv0msrlm27a6p4fcnlx"; depends=[]; }; moezipfR = derive2 { name="moezipfR"; version="1.0.2"; sha256="0sfl1c7cvm1milcglcvz9lyvgricsdm7shx0jxyn50y7xz0padww"; depends=[tolerance VGAM]; }; - mogavs = derive2 { name="mogavs"; version="1.0.1"; sha256="1bzjrcisbg0fb8kj8x9ngd9i1nrhif1rdacz6nrny6xrmw0m3ckp"; depends=[cvTools]; }; - mokken = derive2 { name="mokken"; version="2.8.9"; sha256="086l41rrsb1g6n2wvidhfmgabxbxgragyq3yx5zwcc7xh6amg802"; depends=[poLCA]; }; + mogavs = derive2 { name="mogavs"; version="1.1.0"; sha256="0lhmwdv991bv7j8k066jr7ii94w60ydjpf5pzmv8jlblf3w2pr02"; depends=[cvTools]; }; + mokken = derive2 { name="mokken"; version="2.8.10"; sha256="1lh9gqjm13k7wfmff2vikc1qg7lqr4fagm3jiklr1pv9vgn4dnc3"; depends=[poLCA]; }; moko = derive2 { name="moko"; version="1.0.1"; sha256="1d1gyv44z8k196hfh8a9iccmlrwb42bj1xzabs07h306gpi9m73d"; depends=[DiceKriging DiceOptim emoa GenSA GPareto mco]; }; molaR = derive2 { name="molaR"; version="4.3"; sha256="1bzk7k6d1zbi0fhf9xwdg5mv7dcgajjbb6wxafx4nc2fjxhlldzi"; depends=[alphahull rgl Rvcg]; }; - mombf = derive2 { name="mombf"; version="1.9.5"; sha256="1s776bvfkivif7i3338l1pk8qi5b6b7sxb9zgcidw4kwmj388rdd"; depends=[actuar mgcv mvtnorm ncvreg survival]; }; + mombf = derive2 { name="mombf"; version="1.9.6"; sha256="01qvgxiw0wqp7j4l1qkdy88fvmydz5il09k6nrblbq0sfjf0khmq"; depends=[actuar mgcv mvtnorm ncvreg survival]; }; momentchi2 = derive2 { name="momentchi2"; version="0.1.5"; sha256="1fv0jmwws4mkl9dsaybfpj29ncvqx2idsijgwz2qjblcg309a6k9"; depends=[]; }; moments = derive2 { name="moments"; version="0.14"; sha256="0f9y58w1hxcz4bqivirx25ywlmc80gbi6dfx5cnhkpdg1pk82fra"; depends=[]; }; - momentuHMM = derive2 { name="momentuHMM"; version="1.2.0"; sha256="13r5j4548x9511dgazwwl0k2d8alicrcw8g85s0zmgyrciwrzhil"; depends=[argosfilter boot Brobdingnag car CircStats conicfit crawl doParallel foreach geosphere ggmap ggplot2 gstat LaplacesDemon MASS mitools moveHMM mvtnorm nleqslv numDeriv qdapRegex raster Rcpp RcppArmadillo sp splines2 survival]; }; + momentuHMM = derive2 { name="momentuHMM"; version="1.3.0"; sha256="0cbdmx1rq4524xphc3ncjfz5gqdp5k2zmndg1fifqzjc2n3qki9l"; depends=[argosfilter boot Brobdingnag car CircStats conicfit crawl doParallel foreach geosphere ggmap ggplot2 gstat LaplacesDemon MASS mitools moveHMM mvtnorm nleqslv numDeriv qdapRegex raster Rcpp RcppArmadillo sp survival]; }; momr = derive2 { name="momr"; version="1.1"; sha256="091vzaw8dm29q89lg2iys25rbg2aslgdn9sk06x038nngxdrn95r"; depends=[gplots Hmisc nortest]; }; mondate = derive2 { name="mondate"; version="0.10.01.02"; sha256="18v15y7fkll47q6kg7xzmj5777bz0yw4c7qfiw2bjp0f3b11qrd2"; depends=[]; }; - mongolite = derive2 { name="mongolite"; version="1.2"; sha256="19zhscsgqvzx5gqryzl82dw6impc6sacx2shanmnj4zfgs7bgwqr"; depends=[jsonlite openssl]; }; - monitoR = derive2 { name="monitoR"; version="1.0.5"; sha256="1rqcdg4gha5vh3dvxqzr2albi2capm18rkgf79rd769hrk3z09l5"; depends=[tuneR]; }; + mongolite = derive2 { name="mongolite"; version="1.5"; sha256="06qry561kdg4lxvdayghmhmgb94sqy16gxjp081xnmya0vqf9wjy"; depends=[jsonlite openssl]; }; + monitoR = derive2 { name="monitoR"; version="1.0.7"; sha256="1h1g0m1j13mz37xxwck4s7a0bfqvi0nrzfw60j7bkzaah8zxcc9n"; depends=[tuneR]; }; monkeylearn = derive2 { name="monkeylearn"; version="0.1.3"; sha256="1sq30pkqd8q4dck4ck1lfdfyiir5p4c87i3xnvx7w9spx3c6pxpd"; depends=[digest httr jsonlite tibble]; }; - monmlp = derive2 { name="monmlp"; version="1.1.4"; sha256="09rjv0d1z6v1qxl0csnip53gc00y23r59xbspn8fqwrwjd1v30l1"; depends=[optimx]; }; - monogeneaGM = derive2 { name="monogeneaGM"; version="1.1"; sha256="0fbz26jx05xmna799s086khy6j8xbvv91vh544npd49isnag1v6v"; depends=[ape circular cluster geomorph gplots phytools rgl]; }; + monmlp = derive2 { name="monmlp"; version="1.1.5"; sha256="19cx60csm8mnf6ksg64vlhi8wi1c7bmv9l55y9zmaljblr0kmzxf"; depends=[optimx]; }; monographaR = derive2 { name="monographaR"; version="1.2.0"; sha256="0sis2kw07ifq54w6p56zspmlnvxvq6ajb0sdvc9fk480sfxg9806"; depends=[circular maptools png raster rmarkdown sp]; }; monomvn = derive2 { name="monomvn"; version="1.9-7"; sha256="1bz967sl6ji84x9v0fypjn75d39naaqgvw31n9lgcd5lyj39hbsk"; depends=[lars MASS mvtnorm pls quadprog]; }; monoreg = derive2 { name="monoreg"; version="1.2"; sha256="16n622j1j998a5fhn1c1qbzk5bfa5h09d95ry89gsd00p40hqg0a"; depends=[]; }; monreg = derive2 { name="monreg"; version="0.1.3"; sha256="08rcg2xffa61cgqy8g98b0f7jqhd4yp8nx6g4bq3g722aqx4nfg3"; depends=[]; }; moonBook = derive2 { name="moonBook"; version="0.1.3"; sha256="1wy8qwzymh482gfb4v9v74k666mq8dz2yird7gz43l3hps22kfgb"; depends=[nortest survival]; }; moonsun = derive2 { name="moonsun"; version="0.1.3"; sha256="1y8mwxmcy4iz444c2fayyi4i0jk1k561dp6cbjg2b3lmdml0whmi"; depends=[]; }; - mopa = derive2 { name="mopa"; version="1.0.0"; sha256="0ck3ha6nzpmij91b97vgp1xxgzgxs0jc80hgfivxk1mgilh4rv7a"; depends=[abind dismo e1071 earth gtools lattice PresenceAbsence randomForest ranger raster rpart sampling sp spam spatstat splancs tree]; }; + mopa = derive2 { name="mopa"; version="1.0.1"; sha256="1v876al1afli002v44b4j2acb6n66f0hzz4bmcl60jyny43d1n0c"; depends=[abind dismo e1071 earth gtools lattice PresenceAbsence randomForest ranger raster rpart sampling sp spam spatstat splancs tree]; }; mopsocd = derive2 { name="mopsocd"; version="0.5.1"; sha256="10hssnm1afqmxa9kw6ifqnz3p3yyjrmxgi98zlj31a5g4nis8wb1"; depends=[]; }; morgenstemning = derive2 { name="morgenstemning"; version="1.0"; sha256="17y90cf8ajmkfwla0hm4jgkbkd1mxnym63ph2468sfxkhn0r3v88"; depends=[]; }; - morse = derive2 { name="morse"; version="2.2.0"; sha256="0l52hwhbspf1d6wi0qnwgwjjc1kkixkfdsf81jvwshnxbci4s3kw"; depends=[coda dplyr epitools ggplot2 gridExtra reshape2 rjags stringr]; }; + morse = derive2 { name="morse"; version="3.0.0"; sha256="18657cd3pqy170wapxy3jw4cc13710bf7ix07dss30gpkbvilyvl"; depends=[coda dplyr epitools ggplot2 gridExtra magrittr reshape2 rjags tibble tidyr zoo]; }; mortAAR = derive2 { name="mortAAR"; version="1.0.0"; sha256="0d599npgfk11mv39rk2a64vs5x31g4f7n1n13mzzzcy1lz5y1ih2"; depends=[magrittr Rdpack reshape2]; }; mosaic = derive2 { name="mosaic"; version="1.1.1"; sha256="1c82im22sj0sfqnwwfg7kyp2dllj89f79by07220br5wpa18bsn7"; depends=[broom dplyr ggdendro ggformula ggplot2 glue gridExtra lattice latticeExtra lazyeval MASS Matrix mosaicCore mosaicData readr tidyr]; }; mosaicCalc = derive2 { name="mosaicCalc"; version="0.5.0"; sha256="05s14rmgi15xcz50hcz7l26l95yx9g4i3kihzh0laz8bpi443i39"; depends=[MASS mosaic mosaicCore]; }; mosaicCore = derive2 { name="mosaicCore"; version="0.4.2"; sha256="17yani6781znrrnrcji1q7h6y422bq443gzly0mm6yn8bj7v5qrc"; depends=[dplyr lazyeval MASS rlang tidyr]; }; - mosaicData = derive2 { name="mosaicData"; version="0.14.0"; sha256="0f092wp2lpj8rk6r2bd5mxp4q3n7ia9h838z8prrz56vwh3gbpw0"; depends=[]; }; + mosaicData = derive2 { name="mosaicData"; version="0.16.0"; sha256="09kp3d3h3xmz9fnjaz9nr1jldjd93gyq5gq9sk2a2ymgnbmbc5wm"; depends=[]; }; mosaicModel = derive2 { name="mosaicModel"; version="0.3.0"; sha256="1gx4rzh0h922gyb50vz6q5vqqp5ry5hf2mq95948q2gcady91k5w"; depends=[caret dplyr ggformula ggplot2 knitr lazyeval MASS mosaicCore testthat tibble tidyr tidyverse]; }; - moult = derive2 { name="moult"; version="2.0.0"; sha256="177fhi3f5qsg2k4qb1cgviq96aln80qwri1hf9yym6wrzn8crj7r"; depends=[Formula Matrix]; }; + motmot_2_0 = derive2 { name="motmot.2.0"; version="1.1.2"; sha256="1hnpp2850yhvxki7pcwscg79knvxzs3gx4b19wza0wg3p02fvsb6"; depends=[ape caper coda MASS mvtnorm]; }; + moult = derive2 { name="moult"; version="2.1.0"; sha256="0k0969fwy648x25xw42w5ncimyw2cbq305rzf4m77p3pf0k50m9b"; depends=[Formula Matrix]; }; mountainplot = derive2 { name="mountainplot"; version="1.2"; sha256="1bbgkps1yhfa0lmapqkhhl5mc63p0gzszxw2g910dbi1cjc0pphx"; depends=[lattice]; }; mousetrack = derive2 { name="mousetrack"; version="1.0.0"; sha256="0lf0xh0c3xl27nh5w8wwyrm2jfzfajm2f73xjdgf746dp365qc8n"; depends=[pracma]; }; mousetrap = derive2 { name="mousetrap"; version="3.1.0"; sha256="1r1cpfn6bcgk66lw0la6r3bsv62yhp2m3jkwn0g8rbwrhp9jyl6p"; depends=[cstab diptest dplyr fastcluster fields ggplot2 magrittr pracma psych RColorBrewer Rcpp scales tidyr]; }; @@ -8227,8 +8397,7 @@ in with self; { mpbart = derive2 { name="mpbart"; version="0.2"; sha256="1145n0lxmm0kjm2lc358d79hqws48crj17pjvmchl1pbfd7zi4r8"; depends=[bayesm cvTools mlbench mlogit]; }; mpcv = derive2 { name="mpcv"; version="1.1"; sha256="0vwycspiw9saj811f6alkbijivy7szpahf35bxn2rpn2bdhbn21i"; depends=[lpSolve]; }; mpe = derive2 { name="mpe"; version="1.0"; sha256="17bgdbg1zrf78djd3mwycidwibxvsis7pwkrcynvghcc8l2zfci9"; depends=[mvtnorm]; }; - mph = derive2 { name="mph"; version="0.9"; sha256="11wcy23sv8x7aq6ky8wi0cq55yhjkkm9hn672qy803dwzzxv5y61"; depends=[]; }; - mplot = derive2 { name="mplot"; version="0.8.1"; sha256="00q1ipp7bhh28wrw9wznn8d0hw3s3d5dw6p0jk0kp0mbgyig8kl0"; depends=[bestglm doParallel doRNG dplyr foreach ggplot2 glmnet googleVis leaps plyr reshape2 scales shiny shinydashboard]; }; + mplot = derive2 { name="mplot"; version="1.0.1"; sha256="1bs9hy28hmiz630dwjynlc0apnyi7hz5h9p8al9dy0k7lcsmc4g1"; depends=[bestglm doParallel doRNG dplyr foreach ggplot2 glmnet googleVis leaps plyr reshape2 scales shiny shinydashboard tidyr]; }; mpm = derive2 { name="mpm"; version="1.0-22"; sha256="0wijw8v0wmbfrda5564cmnp788qmlkk21yn5cp5qk8aprm9l1fnk"; depends=[KernSmooth MASS]; }; mpmcorrelogram = derive2 { name="mpmcorrelogram"; version="0.1-4"; sha256="0gv9xswrfvndcjal0csab1w2cnl4rg8pznyxbz84b0qr95jg81ag"; depends=[vegan]; }; mpmi = derive2 { name="mpmi"; version="0.42"; sha256="1j7xsgz3pgbb7a4ykrcj22isbi5svqsxcckai05q7b401h1ppsnh"; depends=[KernSmooth]; }; @@ -8237,8 +8406,9 @@ in with self; { mpr = derive2 { name="mpr"; version="1.0.4"; sha256="13fqvndwxzqa1safa43ad90pkiqnpqmgr0pkwp8lwmnxqmrmj0jb"; depends=[survival]; }; mpt = derive2 { name="mpt"; version="0.5-4"; sha256="01akz72z6z5ybzika120v4v6ah13hfynh98rzbmqgbchijxbbkz6"; depends=[]; }; mptools = derive2 { name="mptools"; version="1.0.1"; sha256="1g4fbfwxv9hir0jn22nh9854blgkh0b5jan3lv0888izj4isa1hc"; depends=[animation lattice latticeExtra raster rasterVis sp viridis zoo]; }; + mr_raps = derive2 { name="mr.raps"; version="0.2"; sha256="069vyvsdgc5m7n2fd0h7jrllz789zvsxka7h5wiy36dc7lagd6f8"; depends=[nortest]; }; mrMLM = derive2 { name="mrMLM"; version="2.1"; sha256="0ip8xd2dj6d4hxq18pf4j6mk4yl00ajci72rr485wk94cr0zj5hy"; depends=[ggplot2 gWidgets gWidgetsRGtk2 lars MASS ncvreg openxlsx qqman RGtk2 RGtk2Extras stringr]; }; - mra = derive2 { name="mra"; version="2.16.10"; sha256="0fxa5yjr703wz3dkjpsh23083wgsp33q9kh0kj4m43p52xvic09f"; depends=[]; }; + mra = derive2 { name="mra"; version="2.16.11"; sha256="0268msdy4cs2ifpagmwiabi6aav54ckn214ai18aqv2h97hmixw0"; depends=[]; }; mratios = derive2 { name="mratios"; version="1.3.17"; sha256="0a2pn4234ri5likaqbxgkw8xqmwchr6fak3nninral0yzd4rcal5"; depends=[mvtnorm]; }; mrbsizeR = derive2 { name="mrbsizeR"; version="1.0.1"; sha256="1gr8mx1byq8nw095yla4gn2ascgw4d90j7a3a3rzwfdavkjj7167"; depends=[fields maps]; }; mrds = derive2 { name="mrds"; version="2.1.18"; sha256="0nhfyl5vcisb9z33sm37vfgnfkkmikr2wwvsjq84jaw2x2jmbxvz"; depends=[mgcv numDeriv optimx Rsolnp]; }; @@ -8254,13 +8424,13 @@ in with self; { msSurv = derive2 { name="msSurv"; version="1.2-2"; sha256="02qm3mq17d2yj5mbz6gapd3zfi1wmiad5hpyimcb39impk43n2hf"; depends=[class graph lattice]; }; msaFACE = derive2 { name="msaFACE"; version="0.1.0"; sha256="1lh8crz507nlddm946lmn73xbnsh4cs0kg238ysnsvxs726c83fs"; depends=[]; }; msaR = derive2 { name="msaR"; version="0.3.0"; sha256="0lj9yhsissr4rgavyhgdxi2nrkq2088darzraisx9jsirjr49jf8"; depends=[ape htmlwidgets]; }; - msaenet = derive2 { name="msaenet"; version="2.7"; sha256="15jxdyc2s0dzjm6665win9y96ijyiv3ggin54z4rrh7qgv6vs7xa"; depends=[foreach glmnet Matrix mvtnorm ncvreg survival]; }; + msaenet = derive2 { name="msaenet"; version="2.8"; sha256="1293qdvn2qv3prnp4rwwndcjnzk49v565yfvzrvb9j7sqvjshf07"; depends=[foreach glmnet Matrix mvtnorm ncvreg survival]; }; msap = derive2 { name="msap"; version="1.1.8"; sha256="0z5lm782jjb9w1h5vgz8bmxjdcrq9zb3xp1w5cb479jjc7krlgg3"; depends=[ade4 ape]; }; - mschart = derive2 { name="mschart"; version="0.2.1"; sha256="0pbzs05gx0qxyggaqld3ysi3aqdqrggj6d3zbzcj3m93q6xpabv8"; depends=[cellranger data_table officer purrr R6 writexl xml2]; }; + mschart = derive2 { name="mschart"; version="0.2.2"; sha256="0h6q7vzrhw9ccj3m037kw72ylqdsj7hlf0bqpghqpa3sv280ap2n"; depends=[cellranger data_table htmltools officer R6 writexl xml2]; }; mscstexta4r = derive2 { name="mscstexta4r"; version="0.1.2"; sha256="1hjcasmn33xav2mw085lcndv0432l6sz327aikf63491wj1sj7mw"; depends=[dplyr httr jsonlite pander stringi]; }; mscsweblm4r = derive2 { name="mscsweblm4r"; version="0.1.2"; sha256="031s00wpr9zfjpii56m67q1phn05vqlhb8cfzhyf6fbrxvpb8k7n"; depends=[httr jsonlite pander]; }; msda = derive2 { name="msda"; version="1.0.2"; sha256="05khpa5qasnngn6yvk87gv5262plqpw4knb6hzgy52w401k0y80r"; depends=[MASS Matrix]; }; - msde = derive2 { name="msde"; version="1.0.2"; sha256="0r7kghy6czw5jwkblmiwf817ifmbgchgmj3lrr2bamvxqpb4h6gg"; depends=[Rcpp RcppProgress]; }; + msde = derive2 { name="msde"; version="1.0.3"; sha256="18l5ca4s1ryyb9i0zsb03klm53f25klwyg171dqkn5z4bqwznp2m"; depends=[Rcpp RcppProgress]; }; mseapca = derive2 { name="mseapca"; version="1.0"; sha256="115njdk8cv55zxd38hq9qaca686ykckni0f3xl8w3bn32gb5g9a7"; depends=[XML]; }; msgl = derive2 { name="msgl"; version="2.3.6"; sha256="0qq9v8bb70iw67raygpzsg35nb2wdafp7rh7wzq42xd4gghi31ya"; depends=[BH Matrix Rcpp RcppArmadillo RcppProgress sglOptim]; }; msgpackR = derive2 { name="msgpackR"; version="1.1"; sha256="0a6vm4q1zfy8wlvhl9wfy09ig1iag9fvjasz5w9bll7idky4ldx5"; depends=[]; }; @@ -8268,7 +8438,7 @@ in with self; { msgtools = derive2 { name="msgtools"; version="0.2.7"; sha256="1lk4r9gdhlfarl5z6a48aih682q7dvwa6lf31119lljpa5gmi92y"; depends=[devtools digest hunspell poio tibble]; }; msir = derive2 { name="msir"; version="1.3.1"; sha256="1ipzgdffsqly3dp91pw7yp3h5cwn08l9qsj7cdmrykd42jc98950"; depends=[mclust rgl]; }; msltrend = derive2 { name="msltrend"; version="1.0"; sha256="1rwy77ijf3hzq2zp47cijwvqcq34rdlfxwhrd9l56bvmlmzr1dqx"; depends=[changepoint forecast plyr Rssa tseries zoo]; }; - msm = derive2 { name="msm"; version="1.6.4"; sha256="0h0h9cgavpylbj9692750if1hw7qylhsad549fqjx5l0zqbh3zhy"; depends=[expm mvtnorm survival]; }; + msm = derive2 { name="msm"; version="1.6.6"; sha256="06m7fflb6lgjfnj9v4wjc63x2as8jvc24qmz6jvgm9fw7hnm24px"; depends=[expm mvtnorm survival]; }; msma = derive2 { name="msma"; version="0.7"; sha256="0rrxxva71j8gk25hi6hycnyrhrdc0skcaj1bnmh029cqhjl3qma5"; depends=[mvtnorm]; }; msme = derive2 { name="msme"; version="0.5.1"; sha256="1bkj10pgmv9q61384fwd2pxccclclc3knc5x212p42w4w49hnm1q"; depends=[lattice MASS]; }; msmtools = derive2 { name="msmtools"; version="1.3"; sha256="0p7xpj78cjc1s015ma7vc38kqiy6wvpyixrdinx4ngig1pqfrq4p"; depends=[data_table msm survival]; }; @@ -8282,13 +8452,12 @@ in with self; { mtconnectR = derive2 { name="mtconnectR"; version="1.1.0"; sha256="068rp4n2afl9qgqrnp0a4lmnq7mq9wrc2yi361bfvib96gzg1fdw"; depends=[data_table dplyr dtw ggplot2 magrittr plyr proxy stringr tidyr XML]; }; mthapower = derive2 { name="mthapower"; version="0.1.0"; sha256="17svh0q9a982a390fgwgvrc2kygxxgyacb3j6gcksbikjrvkcfpw"; depends=[]; }; mtk = derive2 { name="mtk"; version="1.0"; sha256="0vq2xlxf86l92fl91qm8m4yfjyz1h8szmwxiics7sc9f0as0dkmy"; depends=[lhs rgl sensitivity stringr XML]; }; - mtsdi = derive2 { name="mtsdi"; version="0.3.3"; sha256="1hx4m1jnfhkycxizxaklnd9illajqvv1nml8ajfn3kjmrb5z7qlp"; depends=[gam]; }; + mtsdi = derive2 { name="mtsdi"; version="0.3.5"; sha256="0j4hl690n8x7zfpygw5qv0m0jyl8dnz1d3r4314w06h7c578n2kp"; depends=[gam]; }; muRL = derive2 { name="muRL"; version="0.1-11"; sha256="1pyspp1wpd80hcla1zwnl3misqggfk0ls54akwnx5aa617bibzz8"; depends=[maps stringr]; }; muStat = derive2 { name="muStat"; version="1.7.0"; sha256="18727xj9i9hcnpdfnl1b9wd6cp7wl1g74byqpda2gsrcardl57wz"; depends=[]; }; muckrock = derive2 { name="muckrock"; version="0.1.0"; sha256="16lm1iiaaws7clby7qgblqdiznw6abjjgvsxlfpza7l2xdvplxpg"; depends=[]; }; - mudata = derive2 { name="mudata"; version="0.1.1"; sha256="1ihfg5fhnwrwyvi5glvjbxvd26rx68pm1gbs34m8kdz9nwz7knj1"; depends=[dplyr ggplot2 jsonlite plyr reshape2]; }; mudata2 = derive2 { name="mudata2"; version="1.0.0"; sha256="0wlj9kra99ll3vmhkrw3gibricq3gwfl27iymnzrvv847lpvqjml"; depends=[dplyr ggplot2 hms jsonlite lubridate magrittr readr rlang stringr tibble tidyr tidyselect]; }; - mudfold = derive2 { name="mudfold"; version="1.0"; sha256="1zh9qh2ja91lk2z4lpkqinn63v577qivbl0qh3xixfr63primby7"; depends=[ggplot2 gtools reshape2 zoo]; }; + mudfold = derive2 { name="mudfold"; version="1.1.0"; sha256="0mp25lad79dx2101srarx26my172jbkd6a0bzr87hjdgqr1pys5b"; depends=[ggplot2 gtools reshape2 yesno zoo]; }; muhaz = derive2 { name="muhaz"; version="1.2.6"; sha256="1b7gzygbb5qss0sf9kdwp7rnj8iz58yq9267n9ffqsl9gwiwa1b7"; depends=[survival]; }; muir = derive2 { name="muir"; version="0.1.0"; sha256="0h3qaqf549v40ms7c851sspaxzidmdpcj89ycdmfp94b2q3bmz98"; depends=[DiagrammeR dplyr stringr]; }; multcomp = derive2 { name="multcomp"; version="1.4-8"; sha256="0fm78g4zjc6ank316qfw977864shmy890znn4fahwc8jjdhpc252"; depends=[codetools mvtnorm sandwich survival TH_data]; }; @@ -8296,17 +8465,19 @@ in with self; { multdyn = derive2 { name="multdyn"; version="1.6"; sha256="06yab2lmxp7lc7zjk8n194mn5vza0yjbp276iair3ry35my4h3v8"; depends=[data_table ggplot2 Rcpp RcppArmadillo reshape2]; }; multfisher = derive2 { name="multfisher"; version="1.0"; sha256="1pc3f6f87n29cb4caszp4arpy33pc3a0iwmrqinhyw66xjnqm8qp"; depends=[]; }; multgee = derive2 { name="multgee"; version="1.6.0"; sha256="17qrfvxxapqzjy2ps7kk9k9hkmb9zdxflwclyagp1amgv50la49f"; depends=[gnm VGAM]; }; - multiApply = derive2 { name="multiApply"; version="0.0.1"; sha256="1hgvvi00297rri9k5mnz7kmzpf1yxjmj153wwx4a68wv2mf9sx44"; depends=[abind doParallel foreach future plyr]; }; + multiApply = derive2 { name="multiApply"; version="1.0.0"; sha256="1hlrh5v52ym226dg4by0hxbkbpv4qsmmbaraxiyywsmwh3nx2fw8"; depends=[abind doParallel foreach plyr]; }; multiAssetOptions = derive2 { name="multiAssetOptions"; version="0.1-1"; sha256="1kb4qxyl9shvrpqfxq26lhh3sssmyjcnhhcl6gcbb0s86snh9ms9"; depends=[Matrix]; }; multiCA = derive2 { name="multiCA"; version="1.1"; sha256="1vgb13cfq10g8hxykgi3is3mrlbm76vh40cznapl7xxmw226ccrl"; depends=[bitops multcomp]; }; multiDimBio = derive2 { name="multiDimBio"; version="1.1.1"; sha256="0b0lymnli7w91bfd67dsvzbj3flxsrsmbg4a18mzch0j9y6a40x0"; depends=[ggplot2 gridGraphics lme4 MASS misc3d pcaMethods RColorBrewer]; }; multiPIM = derive2 { name="multiPIM"; version="1.4-3"; sha256="0j7d0cgs8zcyiyibzmfhcandad76sf4gm57wkcv98bf96wkls58l"; depends=[lars penalized polspline rpart]; }; + multiROC = derive2 { name="multiROC"; version="1.0.0"; sha256="0zb52g1s4km7gs6krmn3k76p4qywx4bjakfr5gs4s4x7ki3w3x43"; depends=[boot ggplot2 magrittr]; }; multiband = derive2 { name="multiband"; version="0.1.0"; sha256="1f4gmy0yf9zid7kl05zncvvig6hs4nl1h9wkrkc24rxx9risw9k9"; depends=[]; }; multibiplotGUI = derive2 { name="multibiplotGUI"; version="1.0"; sha256="0ig7r4p8mq594cjwclbqwjk8saqkvjqjbbnnxj1hc1sdj7qdlcpf"; depends=[cluster dendroextras Matrix rgl shapes tcltk2 tkrplot]; }; multichull = derive2 { name="multichull"; version="1.0.0"; sha256="1gc7kxxlbanc6rmmbf6h85jf7kj0a78h23m5vwwqqliv018qsv2n"; depends=[igraph plotly shiny shinythemes]; }; multicmp = derive2 { name="multicmp"; version="1.0"; sha256="0cdb1jshrkx1n9a8p4xsa11n3z9g27qcibbc6wz3jcjykdqlwi0r"; depends=[numDeriv]; }; multicon = derive2 { name="multicon"; version="1.6"; sha256="16glkgnm4vlpxkhf1xw1gl1q10yavx9479i21v29lldag35z8pqx"; depends=[abind foreach mvtnorm psych sciplot]; }; multicool = derive2 { name="multicool"; version="0.1-10"; sha256="1ybg9piya9psqg42w9i3zsnavbxhkfklfwl7cb420i5nkq6wpc2v"; depends=[Rcpp]; }; + multifluo = derive2 { name="multifluo"; version="1.0"; sha256="1blmr2cdbdwfyivvla0nmv2n44m168f3d11g5i7vydh8fl17l8vr"; depends=[ellipse imager]; }; multifwf = derive2 { name="multifwf"; version="0.2.2"; sha256="1l6z3pzz6g6w1spp1f918jh6w0jm93qyc882rj8jhn1198d2s8nd"; depends=[]; }; multigraph = derive2 { name="multigraph"; version="0.75"; sha256="0y4ibyy7v5hgxilrw5fxhj12597yl9q8zla5xvvhn9g7ir6xvmxd"; depends=[multiplex]; }; multigroup = derive2 { name="multigroup"; version="0.4.4"; sha256="1r79zapziz3jkd654bwsc5g0rphrk9hkp1fpik8jvjsa1cix40mq"; depends=[MASS]; }; @@ -8317,20 +8488,21 @@ in with self; { multimode = derive2 { name="multimode"; version="1.0"; sha256="00cv1h3qrk1wgkvq69kqis0jb3yhpcsrww80y6gh8ziyr6kcwx1f"; depends=[diptest ks rootSolve]; }; multinbmod = derive2 { name="multinbmod"; version="1.0"; sha256="1c4jyzlcjkqdafj9b6hrqp6zs33q6qnp3wb3d7ldlij7ns9fhg71"; depends=[]; }; multinet = derive2 { name="multinet"; version="1.1.1"; sha256="13f7gqf45ydnyiv36gwcrc8mgv5gy61fak0in7f8bss4bvfldbxx"; depends=[igraph Rcpp]; }; - multinets = derive2 { name="multinets"; version="0.1.0"; sha256="1581bafyxrvy7yk51alni57fjv6hmljdb572wj6jfqa7fm6j4g7p"; depends=[igraph]; }; + multinets = derive2 { name="multinets"; version="0.2.0"; sha256="05m0xin8wxshmwb3b9cgsvi8037wvmirbyyim1xxx2ppfwrdr2a6"; depends=[igraph Rcpp]; }; multinomRob = derive2 { name="multinomRob"; version="1.8-6.1"; sha256="1fdjfk77a79fy7jczhpd2jlbyj6dyscl1w95g64jwxiq4hsix9s6"; depends=[MASS mvtnorm rgenoud]; }; - multipanelfigure = derive2 { name="multipanelfigure"; version="0.10.5"; sha256="0am4vi8mwbrvg6lmh53xp70mwi0klkpd11bd262kcfz125hbjy7n"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_types caTools ggplot2 gridGraphics gtable jpeg magrittr png rsvg tiff]; }; + multipanelfigure = derive2 { name="multipanelfigure"; version="0.10.6"; sha256="1v53fanbnyba3f1ymgxr6q8yy1g5ax49z9ig1bxk3qywpixl8yh3"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_types caTools ggplot2 gridGraphics gtable jpeg magrittr png rsvg tiff]; }; multipleNCC = derive2 { name="multipleNCC"; version="1.2-1"; sha256="080wpyifpw41p6jip2ia7439jdhzyb7lbhs2qzzg0hn6c0qq7mrr"; depends=[mgcv survival]; }; - multiplex = derive2 { name="multiplex"; version="2.7"; sha256="1da28sb2rsnhs3bisgc4npjky3v1rssqh4jb0l51p50p665b5sjz"; depends=[]; }; + multiplex = derive2 { name="multiplex"; version="2.8"; sha256="01l3kmvsrrq0c98dv5m25yjjcbc99in6dv9k5h54cyjsw4jsjhns"; depends=[]; }; multiplyr = derive2 { name="multiplyr"; version="0.1.1"; sha256="0bsf2zhzqwl3skg26fm27j2wpifky0mph26acrlq8p72njkbcw4d"; depends=[bigmemory bigmemory_sri magrittr]; }; multipol = derive2 { name="multipol"; version="1.0-6"; sha256="1yjz0p4mcgzs98s61i8315wyhh986jxp8b0lq66375ckpr2ddcss"; depends=[abind]; }; multirich = derive2 { name="multirich"; version="2.1.1"; sha256="04jr5jvds70j2psyxz12d2my61jcj5hvdyv10pvar2rpqaw0yxyh"; depends=[]; }; + multiselect = derive2 { name="multiselect"; version="0.1.0"; sha256="1cda38zq7c1r56wdfpr5dg0jfw4kzi9p7jq59qm04j461j9ag3q6"; depends=[Hmisc]; }; multisensi = derive2 { name="multisensi"; version="2.1"; sha256="17c1cddgzkgd583fh31wfjahpl5iv1casfs1aja000rqq1x2kfqm"; depends=[knitr sensitivity]; }; multisom = derive2 { name="multisom"; version="1.3"; sha256="0msxmrj4iawxg4vf4r7kj26zalxz4di2w4nxgxiakiig4g4ggy9z"; depends=[class kohonen]; }; multispatialCCM = derive2 { name="multispatialCCM"; version="1.0"; sha256="1fzd91w10iln8qb81z240lq3fi4gq22l4rh9npkav6fiq6g6rlp8"; depends=[]; }; multistate = derive2 { name="multistate"; version="0.2"; sha256="0jdgyzc99k4py39g98c4dlcdl918568ihcyhb7csxbsn1zn1qm9l"; depends=[date relsurv statmod survival]; }; multitaper = derive2 { name="multitaper"; version="1.0-14"; sha256="04wd9bbhyx7697pfy0fpj02v1csr48hkpqj62h9p8a6w84ji4k68"; depends=[]; }; - multivariance = derive2 { name="multivariance"; version="1.0.5"; sha256="1xlyz46q8prywi5kycfcsddhjf5fa0x27ri8yd82nfkl4cgjsc1s"; depends=[]; }; + multivariance = derive2 { name="multivariance"; version="1.1.0"; sha256="1yl1qfckpf98j4ca3wv8zw8vd79isaqvq7qkakyhxy0ljx20jmlk"; depends=[abind igraph]; }; multivator = derive2 { name="multivator"; version="1.1-9"; sha256="0vbqvhmym46zjr1h4s53sjrddfjpv8wi0sq4lrh2rmqarq068416"; depends=[emulator mvtnorm]; }; multiwave = derive2 { name="multiwave"; version="1.2"; sha256="1bw071izjxrsk5gx8s49nrlryabpgpg7k2z1ghmk8p6i9m5apnl8"; depends=[]; }; multiway = derive2 { name="multiway"; version="1.0-4"; sha256="0gzsxcmavyrsrkmiq7yr0jmxbyk91h9kk9w2gazqxddk2c8q4g2s"; depends=[quadprog]; }; @@ -8345,8 +8517,8 @@ in with self; { musica = derive2 { name="musica"; version="0.1.3"; sha256="0cfzfar706l0xdb0n11m18mayj5rrplvf4qry36vgxsiaxcba90r"; depends=[data_table lubridate magrittr qmap]; }; mut = derive2 { name="mut"; version="1.1"; sha256="0v0vviarsmaiap3fa82ia01cblana65fd3cbj7jkd3aral6pm6yz"; depends=[expm Familias IBDsim paramlink]; }; mutSignatures = derive2 { name="mutSignatures"; version="1.2"; sha256="1kbp221lm43a5wiw754yjkd3qidmca20m0i8jlxsqk8ijbp40ky2"; depends=[cluster doParallel foreach ggplot2 pracma proxy]; }; - mutoss = derive2 { name="mutoss"; version="0.1-10"; sha256="1pijr3admnciiwdgxbdac4352m7h08jyvpj7vdd27yx07wp2rri3"; depends=[multcomp multtest mvtnorm plotrix]; }; - mutossGUI = derive2 { name="mutossGUI"; version="0.1-10"; sha256="16fgmpnym9nhiywqimjgv10swrvs3whp0nlzsw573vv0k6qjmwd2"; depends=[CommonJavaJars JavaGD JGR multcomp mutoss plotrix rJava]; }; + mutoss = derive2 { name="mutoss"; version="0.1-12"; sha256="1yk7p7pb2xm38d3j19ysgwmix48lvimbhkhjjwk5jmr1a0ysx298"; depends=[multcomp multtest mvtnorm plotrix]; }; + mutossGUI = derive2 { name="mutossGUI"; version="0.1-11"; sha256="08pcca9gzns83az6jbjzv4xhm1wgmchhzz4f54x1aq0nmvsz3qq1"; depends=[CommonJavaJars JavaGD JGR multcomp mutoss plotrix rJava]; }; mvLSW = derive2 { name="mvLSW"; version="1.2.1"; sha256="012p828pyzz6xnv2akax5hx79v522dg4a2gqrjss526qylpg5j9l"; depends=[fields wavethresh xts zoo]; }; mvMORPH = derive2 { name="mvMORPH"; version="1.0.9"; sha256="09368vgyb1s18awfr07hs1s40n2h15hy08fmir3ayhdfrdain4k6"; depends=[ape corpcor phytools spam subplex]; }; mvMonitoring = derive2 { name="mvMonitoring"; version="0.1.0"; sha256="03nvq8nmrmrpzyxlsqzww5ghk640115l1jgmgwfahhjxkdpkzfxx"; depends=[BMS dplyr lazyeval plyr rlang robustbase xts zoo]; }; @@ -8355,7 +8527,7 @@ in with self; { mvQuad = derive2 { name="mvQuad"; version="1.0-6"; sha256="016477dhjdkqiadc631vzpbp967mn4yli6by3s1k348mlfirwsi3"; depends=[data_table statmod]; }; mvSLOUCH = derive2 { name="mvSLOUCH"; version="1.3.3"; sha256="18gnxs1cx4f7r3m2vgrkmm41vwkamk9mn5hcgjacv2adl0ihnagd"; depends=[ape corpcor mvtnorm numDeriv ouch]; }; mvShapiroTest = derive2 { name="mvShapiroTest"; version="1.0"; sha256="0zcv5l28gwipkmymk12l4wcj9v047pr8k8q5avljdrs2a37f74v1"; depends=[]; }; - mvabund = derive2 { name="mvabund"; version="3.12.3"; sha256="1lk1kqglj7czbq38714dwlbhnhazba8clbg9s1pmrakh5b2gkvz7"; depends=[MASS Rcpp RcppGSL statmod tweedie]; }; + mvabund = derive2 { name="mvabund"; version="3.13.1"; sha256="1z8bj9zbc8h7w1xki9sc2p2rq6lv8gbcmiy9819z54d7lx1i9cnj"; depends=[MASS Rcpp RcppGSL statmod tweedie]; }; mvbutils = derive2 { name="mvbutils"; version="2.7.4.1"; sha256="1vs97yia78xh35sdfv5pj3ddqmy83qgamvyyh9gjg0vdznqhffzg"; depends=[]; }; mvc = derive2 { name="mvc"; version="1.3"; sha256="0kmh6vp7c2y9jf71f4a29b0fxcl0h7m4p8wig4dk3fi7alhjf7ym"; depends=[rattle]; }; mvcluster = derive2 { name="mvcluster"; version="1.0"; sha256="0yfl31scdgsiljvpv1yxc5bwwzr6kbhpjwqh2kql7xf0m0hc1pr4"; depends=[Rcpp RcppArmadillo]; }; @@ -8368,20 +8540,20 @@ in with self; { mvmeta = derive2 { name="mvmeta"; version="0.4.7"; sha256="1yadaviq66wdfs0dipn6gxk7jqvzwzjdr8lkfggdsl4vyyi9pwip"; depends=[]; }; mvnTest = derive2 { name="mvnTest"; version="1.1-0"; sha256="0p37skzpljzz19x1hwh2hbxqins19zkbz7nlgfws5pgp9apazafq"; depends=[MASS mvtnorm]; }; mvna = derive2 { name="mvna"; version="2.0.1"; sha256="10i42hjm5bk62c20pmxhya283yzw1902ivkflmyqy79jri266dxf"; depends=[lattice]; }; - mvnfast = derive2 { name="mvnfast"; version="0.2.2"; sha256="1b548cl6gf5vks90z7hf4nl5hbl5jb1r50vnpv1hsjv2qbn0k9hr"; depends=[BH Rcpp RcppArmadillo]; }; + mvnfast = derive2 { name="mvnfast"; version="0.2.5"; sha256="122zjzr0v4943cax10lp6flwfv479mncvalaj09kb173s5rgmf91"; depends=[BH Rcpp RcppArmadillo]; }; mvngGrAd = derive2 { name="mvngGrAd"; version="0.1.5"; sha256="0ir4pakfb2jq84rbfqix6rph8q6cgadjdn49rrdl4439b8hlsg8k"; depends=[]; }; mvnmle = derive2 { name="mvnmle"; version="0.1-11"; sha256="02mpmrr22cqb3v8x7kydgg715yl3lrdgzgdqpchmp0xrl2db8gq4"; depends=[]; }; mvnormtest = derive2 { name="mvnormtest"; version="0.1-9"; sha256="1iaxjwp7bgxhaa4xqvgqb61316mq2fb0452d0pabhmbxkvmvdnj6"; depends=[]; }; mvnpermute = derive2 { name="mvnpermute"; version="1.0.0"; sha256="0mbyj5i5vysrnl3pgypl0cjf3sylsvzfl1pcxkn0q16560vqh2ba"; depends=[]; }; - mvord = derive2 { name="mvord"; version="0.2.0"; sha256="19g91rv9f5isx8x8pbx7n2chdqdf2drp19b5dhrf3ibx4fq3ai8m"; depends=[MASS Matrix mnormt numDeriv optimx pbivnorm]; }; - mvoutlier = derive2 { name="mvoutlier"; version="2.0.8"; sha256="07a2pv8bw5k0faiy0skdchg7c0n236saq5d8plqq7234n3rjl8pg"; depends=[robCompositions robustbase sgeostat]; }; + mvord = derive2 { name="mvord"; version="0.2.1"; sha256="1s9b1lcgfbz333mq6bhqfi9753mhgf3hl5mrakzw2i0inmhjr9mx"; depends=[MASS Matrix mnormt numDeriv optimx pbivnorm]; }; + mvoutlier = derive2 { name="mvoutlier"; version="2.0.9"; sha256="1d562h3xicq962h27fi95qhrz9vkwxk0p8axhps1cy4b49w4bygi"; depends=[robCompositions robustbase sgeostat]; }; mvprpb = derive2 { name="mvprpb"; version="1.0.4"; sha256="1kcjynz9s7vrvcgjb9sbqv7g50yiymbpkpg6ci34wznd33f7nrxm"; depends=[]; }; mvrtn = derive2 { name="mvrtn"; version="1.0"; sha256="0k0k76wk5zq0cjydncsrb60rdhmb58mlf7zhclhaqmli1cy697k8"; depends=[]; }; mvsf = derive2 { name="mvsf"; version="1.0"; sha256="1krvsxvj38c5ndvnsd1m18fkqld748kn5j2jbgdr3ca9m3i5nlwf"; depends=[mvnormtest nortest]; }; mvst = derive2 { name="mvst"; version="1.0.1"; sha256="0sv8pd1524pr3xpxplq468dxfd0wipdr41awqwvcljpw5wgl34qa"; depends=[MCMCpack mnormt mvtnorm]; }; mvtboost = derive2 { name="mvtboost"; version="0.5.0"; sha256="06zgx1c2470bh3x6s2awzkxbyij6bvzv23xbvamg77v5pz5bjj6h"; depends=[gbm RColorBrewer]; }; mvtmeta = derive2 { name="mvtmeta"; version="1.0"; sha256="0g0d4lrz854wkd0dz5aiad54i46aqkfhsq6cpbsfv0w5l2kwiqqz"; depends=[gtools]; }; - mvtnorm = derive2 { name="mvtnorm"; version="1.0-6"; sha256="0i74s9dl4jf1gln6agra8h38qn9ifd5v0gi13caj1da5nrbmn0aa"; depends=[]; }; + mvtnorm = derive2 { name="mvtnorm"; version="1.0-7"; sha256="0f7hzflygdnbwvzadr3knhybhanwg7agqddclj6mhbvwqpgb0qyh"; depends=[]; }; mvtsplot = derive2 { name="mvtsplot"; version="1.0-1"; sha256="0g5grrha77rsnkfasw5pxnpmkl7vgb728ms8apyg8xnbmgilg9vv"; depends=[RColorBrewer]; }; mwa = derive2 { name="mwa"; version="0.4.1"; sha256="0bd4i1zzwmcsrm2bg14f528yav5hb6qxcd7x4i5rwdcx1hlx27bw"; depends=[cem MASS rJava]; }; mwaved = derive2 { name="mwaved"; version="1.1.5"; sha256="1hb7y42fy26pv6cf235g4xx1vyvwx7chwryi7phjd2aavxffj18z"; depends=[Rcpp shiny]; }; @@ -8393,22 +8565,22 @@ in with self; { mztwinreg = derive2 { name="mztwinreg"; version="1.0-1"; sha256="1rg6ikaqdrc7q44s3r3km8h45prnvcpzpxd7nxbmh209iz9j19ai"; depends=[mclogit rms]; }; n1qn1 = derive2 { name="n1qn1"; version="6.0.0-1"; sha256="01bci81lhanxpfl454gl09krgb4229dnq9f34bngwm8ygvdadfgy"; depends=[Rcpp RcppArmadillo]; }; nCDunnett = derive2 { name="nCDunnett"; version="1.1.0"; sha256="0q2db1pixqr0wbx4bd05c98i1p0vgaqsfa1iwjxr08c62a5xhkks"; depends=[]; }; - nCal = derive2 { name="nCal"; version="2016.7-31"; sha256="12zj22myfxqxyq7bl669ngyk6yb3i9gsg00qqw5a5x2w95imwv20"; depends=[drc gdata gWidgets kyotil]; }; + nCal = derive2 { name="nCal"; version="2017.12-3"; sha256="1k03zrf67il7miap81r2fdnsi15i98wmwc3a8zxn54qfr2w9pcy6"; depends=[drc gdata gWidgets kyotil]; }; nFCA = derive2 { name="nFCA"; version="0.3"; sha256="1jyyzagmppm3i7vh3ia4ic0zql1w04f66z81v0zpdihd4cbl5ra7"; depends=[]; }; nFactors = derive2 { name="nFactors"; version="2.3.3"; sha256="016d76yfxz7gx7zz5dgwjmj2c5m6kxdmqj0lln5w6d70r9g1kxg7"; depends=[boot lattice MASS psych]; }; nLTT = derive2 { name="nLTT"; version="1.3.1"; sha256="1wha26lcgk2kw48vyiws1ciyp8x6d7nmkrahh5b8w23ns6bqpngf"; depends=[ape coda deSolve]; }; + na_tools = derive2 { name="na.tools"; version="0.2.1"; sha256="1fdbrf97mvak44vzarwqr4w6cs6msr42zcfxl2ci3i67nlgsv4pl"; depends=[]; }; nabor = derive2 { name="nabor"; version="0.4.7"; sha256="16dxnvq6yxlrignzvxjdwzwm32fn2a8bsjqjsg5qz94ir7g3pzm6"; depends=[BH Rcpp RcppEigen]; }; nadiv = derive2 { name="nadiv"; version="2.14.3.1"; sha256="08276bakyrn9d9vh08yzan60kigsihwfhgx788gwp6pk8v6m25wa"; depends=[Matrix]; }; - naivebayes = derive2 { name="naivebayes"; version="0.9.1"; sha256="051mg1idim75k181v4n8s5rji94rwy9c75yjkavjhr4brhizqy8f"; depends=[]; }; + naivebayes = derive2 { name="naivebayes"; version="0.9.2"; sha256="0xmgcvvhfh7v8afi8fywaldawbx3s5hwgpvyyp2c9m6nrhw1kknl"; depends=[]; }; namedCapture = derive2 { name="namedCapture"; version="2017.06.01"; sha256="14zimn3wbavbkwra8vfmqdm1q5bmlmsbg0b29cjly5dd4zlfzzb0"; depends=[]; }; namespace = derive2 { name="namespace"; version="0.9.1"; sha256="1bsx5q19l7m3q2qys87izvq06zgb22b7hqblx0spkvzgiiwlq236"; depends=[]; }; - nandb = derive2 { name="nandb"; version="0.2.1"; sha256="18xk1xk77a14n9dvwrhqihagiblawgacyicx37vbza01b4x502c5"; depends=[abind autothresholdr BH BiocParallel DescTools dplyr EBImage filesstrings ggplot2 hexbin magrittr matrixStats ore purrr R_utils Rcpp RcppRoll readr reshape2 RSAGA stringr tibble viridis]; }; - naniar = derive2 { name="naniar"; version="0.1.0"; sha256="036izabfxc5mni7brxk0ksijypwq6hbbrib980z90i3zixgqjh1b"; depends=[dplyr forcats ggplot2 magrittr purrr purrrlyr rlang tibble tidyr viridis visdat]; }; + naniar = derive2 { name="naniar"; version="0.2.0"; sha256="04r3yfv6sv1yrwl4vasn5nxr0bn6fwdjk2zyx4p7vy8kfcw24300"; depends=[dplyr forcats ggplot2 glue magrittr purrr purrrlyr rlang tibble tidyr viridis visdat]; }; nanop = derive2 { name="nanop"; version="2.0-6"; sha256="007gdc93pk0vpfmsw7zgfma2k1045n2cxwwsyy276smy0ys9fdhp"; depends=[distrEx rgl]; }; nanotime = derive2 { name="nanotime"; version="0.2.0"; sha256="138qz844sczgzzl8vn5079590hnq96w7jdbn851cpw64gmq21r4w"; depends=[bit64 RcppCCTZ zoo]; }; naptime = derive2 { name="naptime"; version="1.3.0"; sha256="1cadfv5sdsmz61kf96hf2gbnghf24q40g5c3h9b8prvkxslap691"; depends=[lubridate]; }; - nardl = derive2 { name="nardl"; version="0.1.0"; sha256="0rd4a9diz5mv7ra2c8d60yl407i8bnkxz2dq5iz02c6vm94j322v"; depends=[car]; }; - narray = derive2 { name="narray"; version="0.3.2"; sha256="1x6fl1z19cvh15czb8mncpnz9p61djmc6khv8wb207krwfixaq5x"; depends=[abind pryr reshape2 stringr]; }; + nardl = derive2 { name="nardl"; version="0.1.2"; sha256="16qac9qgmv96iwsr5xbg24x4a1livpjb9qmfd0i8m3nv6858c7ah"; depends=[car Formula lmtest matlab strucchange tseries]; }; + narray = derive2 { name="narray"; version="0.4.0"; sha256="0cr0y8mqwprxk0bv9160xvqxgvqkihn3avzsjm6ccivvb8zlkqxv"; depends=[reshape2 stringr]; }; nasadata = derive2 { name="nasadata"; version="0.9.0"; sha256="0y88qdy8c1y0prsajxic5vdqfixv9knjsbhw3vbfac8wv3a69bjl"; depends=[dplyr jsonlite plyr png]; }; nasaweather = derive2 { name="nasaweather"; version="0.1"; sha256="05pqrsf2vmkzc7l4jvvqbi8wf9f46854y73q2gilag62s85vm9xb"; depends=[]; }; nat = derive2 { name="nat"; version="1.8.11"; sha256="1s5hbi1b20jq0qv4px0zrwsivhi2mdlqbwx4lv55mdhj447rxk1x"; depends=[digest filehash igraph nabor nat_utils plyr rgl yaml]; }; @@ -8416,6 +8588,7 @@ in with self; { nat_templatebrains = derive2 { name="nat.templatebrains"; version="0.8.2"; sha256="09kyi4p28n8dgw8jpv00vh9vl6nqmmgqfriwkicx8yyq65vh6fxk"; depends=[digest igraph memoise nat rappdirs rgl]; }; nat_utils = derive2 { name="nat.utils"; version="0.5.1"; sha256="12g87ar795xfbz7wljksb24x9hqvcirjr50y4mbpx1427r0l7clv"; depends=[]; }; natserv = derive2 { name="natserv"; version="0.1.4"; sha256="0qwf7lapx5gchk8xmdnmxr10j5dnkp52mqnh1ja216z7l841cl07"; depends=[crul data_table tibble xml2]; }; + natural = derive2 { name="natural"; version="0.9.0"; sha256="0zxwbf3gg2h0bhl2w0md3rd162vlsgg0dv3187hc0ax7333cc4cx"; depends=[glmnet Matrix]; }; naturalsort = derive2 { name="naturalsort"; version="0.1.3"; sha256="0mz801y9mzld9ypp3xmsjw2d8l9q97sdnv09wrci9xi3yg2sjf6d"; depends=[]; }; nauf = derive2 { name="nauf"; version="1.1.0"; sha256="1c7g7qjd77lcx2nghw1mxp60q7sc2hjdr4drjkypzyqs8q3q97rm"; depends=[bayesplot car digest lme4 lmerTest loo lsmeans MASS Matrix pbkrtest Rcpp rstan rstanarm shinystan standardize stringr]; }; nbc4va = derive2 { name="nbc4va"; version="1.0"; sha256="0y1qpkzjr327qyvmqf129m400rvn6gwk72ccnly6cqq53icrarn4"; depends=[]; }; @@ -8430,71 +8603,76 @@ in with self; { ncdump = derive2 { name="ncdump"; version="0.0.3"; sha256="09g98mzpky32z41jf23ahzhyv34l34y1gqq99j2hl4pqlvvhxs9i"; depends=[dplyr ncdf4]; }; ncf = derive2 { name="ncf"; version="1.1-7"; sha256="0r3xhpinkcnkzc855q8ddd889v12snx4n1g8jyw9cnmrki8n2hxh"; depends=[]; }; ncg = derive2 { name="ncg"; version="0.1.1"; sha256="1jzkzp61cc5jxmdnl867lcrjjm7y2iw9imzprbd098p1j3w8fvj7"; depends=[]; }; + ncmeta = derive2 { name="ncmeta"; version="0.0.2"; sha256="1qr0zfyy8g3zrmvg6i6b7sfvl3lavr391rqgf6pqhslg7i9cgpiz"; depends=[dplyr rlang RNetCDF tibble]; }; ncvreg = derive2 { name="ncvreg"; version="3.9-1"; sha256="1v71r2k25n28lhpqsgzaaw48w1gwn0yjbir64hx5lchdbvd5k1j3"; depends=[]; }; ndjson = derive2 { name="ndjson"; version="0.5.0"; sha256="1ivwr9wm45ivk4jcc39hgqsyhilpisyhccks093iisx51vhxjjl0"; depends=[data_table dplyr dtplyr Rcpp]; }; ndl = derive2 { name="ndl"; version="0.2.17"; sha256="08h01rw7gsa31zp91q2rsw1ba9yf0fyhz3w8s9xq5788qwc80280"; depends=[Hmisc MASS Rcpp]; }; ndtv = derive2 { name="ndtv"; version="0.10.0"; sha256="1j4g5qclfbw7fkykaclrsb2d70vy40fd1rgr1n73qyrkx0fyym44"; depends=[animation base64 jsonlite MASS network networkDynamic sna statnet_common]; }; nearfar = derive2 { name="nearfar"; version="1.1"; sha256="0i2nc1b4vslgjj29x5q24yxv9l3i0g5hcrbm9xy1b3039n70cwix"; depends=[car GenSA MASS nbpMatching]; }; neariso = derive2 { name="neariso"; version="1.0"; sha256="1npfd5g5xqjpsm5hvhwy7y84sj5lqw9yzbnxk6aqi80gfxhfml4c"; depends=[]; }; - neat = derive2 { name="neat"; version="1.1.1"; sha256="12q9g8b0cf9j9cp0xc4h4bs4jv251arq9pf7c2hqgvirgr10ni2g"; depends=[igraph]; }; - neatmaps = derive2 { name="neatmaps"; version="1.0.6"; sha256="0n12dkk5vm1y3pnxrzsym6d5mwk4xzcs3glblbldhymvs1vlsgqw"; depends=[dendextend ggplot2 heatmaply igraph pvclust]; }; + neat = derive2 { name="neat"; version="1.1.2"; sha256="13y81cnf3j1cncfr5ii3xbk2k11yi3wqgr54dlfzyfzlah26zp5p"; depends=[igraph]; }; + neatmaps = derive2 { name="neatmaps"; version="1.0.7"; sha256="07nr8c5i1s3sba4l2123vb50b1cgn1qjdckwmyjwwai1yb3smkag"; depends=[dendextend ggplot2 heatmaply igraph pvclust]; }; needs = derive2 { name="needs"; version="0.0.3"; sha256="16dkjpijz3rz7kd5ggxsdg55iwd42nll1vk6g5ix4xdbqrx6cp9x"; depends=[]; }; needy = derive2 { name="needy"; version="0.2"; sha256="1ixgpnwrg6ph1n5vy91qhl1mqirli9586nzkmfvzjrhdvrm0j5l0"; depends=[]; }; negenes = derive2 { name="negenes"; version="1.0-5"; sha256="0fdhc0v0b820wfg3sypvya7zhg7mhfmdbfiwn1lj3a2xg01zvc2n"; depends=[]; }; neighbr = derive2 { name="neighbr"; version="1.0"; sha256="0612nzpryj4xp0ncpvpn56x5n9ammzjp3ysq1rj1fc84h0p7nml3"; depends=[]; }; - neldermead = derive2 { name="neldermead"; version="1.0-10"; sha256="1snavf90yb12sydic7br749njbnfr0k7kk20fy677mg648sf73di"; depends=[optimbase optimsimplex]; }; + neldermead = derive2 { name="neldermead"; version="1.0-11"; sha256="0gf9rfwz48sadl6960mpfb6a3l9n5p28yq3n0a9vz8mr57vh1dzg"; depends=[optimbase optimsimplex]; }; neotoma = derive2 { name="neotoma"; version="1.7.0"; sha256="0f4s5yw0yj4n8lkvbl2l3ivdclg9pknyss7qhppp85rdxzwxilpq"; depends=[analogue httr jsonlite leaflet plyr reshape2 xml2]; }; nephro = derive2 { name="nephro"; version="1.2"; sha256="1izmzx8lah322xzb42asfnrvr2c9yqd0zf7fmrhwd3p4rr1rqa7d"; depends=[]; }; nesRdata = derive2 { name="nesRdata"; version="0.1.0"; sha256="1h33hql0vgkr2ps1ysisdxxb0cnm18mh8sbd3fxy9xf42icwfwdb"; depends=[dataone dplyr purrr rappdirs readr]; }; nestedRanksTest = derive2 { name="nestedRanksTest"; version="0.2"; sha256="0r08jp8036cz2dl1mjf4qvv5qdcvsrad3cwj88x31xx35c4dnjgj"; depends=[]; }; net_security = derive2 { name="net.security"; version="0.3.0"; sha256="15vvcmakl9hl1srdhjf73g2bwwcxn93220i4gv0rcsw5732mjanz"; depends=[data_table dplyr jsonlite plyr R_utils stringr XML]; }; - netCoin = derive2 { name="netCoin"; version="0.2.6"; sha256="0vg1kqkgqb93n5mdq1ivf4nals7iffdkdxccj5m54bvm2j65028l"; depends=[igraph Matrix]; }; + netCoin = derive2 { name="netCoin"; version="0.2.7"; sha256="0dzncn72zl3yp2gds7vmjk5j82rb80j03ivkf74b0z5s4ckxhc9b"; depends=[haven igraph Matrix]; }; netassoc = derive2 { name="netassoc"; version="0.6.3"; sha256="1hyshnbpq60a3y13b4sh1c2rk78x09q01b7q6xrgv10w7bn9r2sg"; depends=[corpcor huge igraph infotheo vegan]; }; netcoh = derive2 { name="netcoh"; version="0.2"; sha256="0q60hvyparlwdww6as6hcdzfs6q3n8z1rfpj53r5q2s77x6q07xx"; depends=[Matrix Rcpp RcppArmadillo]; }; netcom = derive2 { name="netcom"; version="1.0.4"; sha256="0fka14sffm0p1gldk27fd62ng05spfpbn665b4w5hdf1z4z0bs20"; depends=[clue expm igraph Matrix pdist pracma vegan]; }; netdiffuseR = derive2 { name="netdiffuseR"; version="1.19.0"; sha256="0rnf7hf5vxpqw2rn00yqmkgpsx752pmfigyggbs4ikfbcsjq24sx"; depends=[boot igraph MASS MatchIt Matrix network networkDynamic Rcpp RcppArmadillo sna SparseM]; }; netgen = derive2 { name="netgen"; version="1.3"; sha256="1iywpl9n1yplnd38dff8m9mz1vlfbvplw393grhpav5czcknj160"; depends=[BBmisc checkmate ggplot2 igraph lhs lpSolve mvtnorm stringr]; }; netgsa = derive2 { name="netgsa"; version="3.0"; sha256="0cqyiilpxhdi6zmibn85y1aqwpcs1aialz34klakmllzn6kvdsng"; depends=[corpcor glasso glmnet igraph Matrix]; }; - netmeta = derive2 { name="netmeta"; version="0.9-6"; sha256="077pwbyd1hj8mqhik410dpccyb6h605zrfw03sjynxvkhyf4pb5b"; depends=[magic MASS meta]; }; + netgwas = derive2 { name="netgwas"; version="0.1.3.1"; sha256="1fgs7dr4dhrs4hmscazsyiq1nkkx1vvygmarmy7pyqhxzv13kdwg"; depends=[glasso huge igraph MASS Matrix RBGL tmvtnorm]; }; + netmeta = derive2 { name="netmeta"; version="0.9-7"; sha256="0yi1x0dyi7kim2yz9qwsbdnx1k6k15nmv6wlaby9z9yl7p2ij3jq"; depends=[magic MASS meta]; }; + netrankr = derive2 { name="netrankr"; version="0.2.0"; sha256="1y56y5wv95d7mmjf8rrwr7cs0k64h9a2qbpind4xp0kakpjihn7m"; depends=[igraph Rcpp RcppArmadillo]; }; nets = derive2 { name="nets"; version="0.9"; sha256="1wcr0fj50w3rqxw0k9cb81c2psdkb0dwwwzrjvxv50hksbhyi8kn"; depends=[igraph]; }; nettools = derive2 { name="nettools"; version="1.0.1"; sha256="13fw316r31g9cjlbyy9qfccsyagxb6pyvn5k32f166b7vj92mk1q"; depends=[combinat dtw igraph Matrix minerva minet rootSolve WGCNA]; }; network = derive2 { name="network"; version="1.13.0"; sha256="11sg330xb7gcnl3f6lwhhjdabz6mk43828i2np635pqw4s4yl13s"; depends=[]; }; networkD3 = derive2 { name="networkD3"; version="0.4"; sha256="02wxki67drppgfka1is1ykg1f2rxf0x0657c0crj7ipfy62jbf1k"; depends=[htmlwidgets igraph magrittr]; }; networkDynamic = derive2 { name="networkDynamic"; version="0.9.0"; sha256="1949fbcw0gq8lsm6rx5d5mpj1y9k4rk2v0pmm1kxi5igi6yd8lg9"; depends=[network statnet_common]; }; networkDynamicData = derive2 { name="networkDynamicData"; version="0.2.1"; sha256="176al8jp0gha6yzhyn5flmyackmmdnh1h8sasqrdcmba7ha7cya6"; depends=[network networkDynamic]; }; - networkGen = derive2 { name="networkGen"; version="0.1.0"; sha256="0301a1vmkvnsiyii5hkmnqdw6gp8ipfqpvzgl7b5ca5fwhpad169"; depends=[igraph mgcv]; }; + networkGen = derive2 { name="networkGen"; version="0.1.1"; sha256="1vnh5dajiaf47kx1sxyp744mlk3yvl4sxj380i3b3ic1wlgyd2h1"; depends=[igraph mgcv]; }; + networkR = derive2 { name="networkR"; version="0.1.0-0"; sha256="1apgvnny2ynhnyn1a2kjiyvxrdqgkqar2w543wph4lnavsi4i0cp"; depends=[data_table fastmatch Matrix Rcpp RcppArmadillo]; }; networkTomography = derive2 { name="networkTomography"; version="0.3"; sha256="1hd7av231zz0d2f9ql5p6c95k7dj62hp0shdfshmyfjh8900amw7"; depends=[coda igraph KFAS limSolve plyr Rglpk]; }; networkreporting = derive2 { name="networkreporting"; version="0.1.1"; sha256="1ssbz8lw4mlwcblwfbyffvayvb2gmihq4qlz5q9222fn4aa3raxd"; depends=[dplyr functional ggplot2 lazyeval plyr reshape2 stringr surveybootstrap]; }; networksis = derive2 { name="networksis"; version="2.1-3"; sha256="1kvil3qs7xd94ak9jgvj1nss55gjg0y7d35zmass9h1hjkcrq7bg"; depends=[network]; }; - networktools = derive2 { name="networktools"; version="1.1.0"; sha256="1arfanladgnk6gkswd4hbhvycf5zz70v0cj8300qza7ksmmyvl7v"; depends=[devtools ggplot2 gridExtra igraph IsingFit NetworkComparisonTest nnet qgraph reshape2]; }; + networktools = derive2 { name="networktools"; version="1.1.1"; sha256="1cfjhh0w5gs1v6d9q40bcjs658p308i20nybnqb8r7nkf77acxbg"; depends=[cocor devtools ggplot2 gridExtra igraph IsingFit NetworkComparisonTest nnet qgraph reshape2]; }; neuRosim = derive2 { name="neuRosim"; version="0.2-12"; sha256="1hsnw9xipdr74fydq9013252ycbi9igh28s0j4dbdx52pv3iixzl"; depends=[deSolve]; }; neural = derive2 { name="neural"; version="1.4.2.2"; sha256="05hrqgppgwp38rdzw86naglxj0bz3wqv04akq7f0jxbbjc6kwy4j"; depends=[]; }; neuralnet = derive2 { name="neuralnet"; version="1.33"; sha256="14ga04mcd793v9a2584jb9l7n20kw00fgy3gayfwrkr1j39szdls"; depends=[MASS]; }; - neurobase = derive2 { name="neurobase"; version="1.13.2"; sha256="1sv2kxahw123f6a7cl35n6dyz4ip8iifzk4dcp6jf8fnnnjyg8aq"; depends=[matrixStats oro_nifti R_utils RNifti]; }; + neurobase = derive2 { name="neurobase"; version="1.26.1"; sha256="0fb2cvh3j650zjx7b60jfrvm5i7n3l98wis91bmyr9hx3qz24rj5"; depends=[abind matrixStats oro_nifti R_utils RNifti]; }; neuroblastoma = derive2 { name="neuroblastoma"; version="1.0"; sha256="0hs87fvwaq53xxbh2dw3hjsmf1zkyqli9qyacxf72fnkyhhl8b45"; depends=[]; }; - neurohcp = derive2 { name="neurohcp"; version="0.6"; sha256="0slk963rcrh5pyw1iv80dnh0a1yabkyvlvyshm2jwznp87r6lk3k"; depends=[base64enc digest httr xml2]; }; + neurohcp = derive2 { name="neurohcp"; version="0.7.3"; sha256="0mz8aiyimw3vqkgm54mwfvnki5hg1j958r71fs1k213zn1cg9qqr"; depends=[base64enc digest httr xml2]; }; neuroim = derive2 { name="neuroim"; version="0.0.6"; sha256="00cjr6pkip6zi2d0q3qbn3lb3k0z82v6c19qslvgpa9n0g63dr5p"; depends=[abind assertthat hash iterators Matrix Rcpp readr rgl stringr yaImpute]; }; neuropsychology = derive2 { name="neuropsychology"; version="0.5.0"; sha256="0hlbjf8hxz4cl7fvg9mbyfmcyyxncc2nh9h1mrd2yzgrpgn0d0b5"; depends=[BayesFactor caret dplyr ggcorrplot ggplot2 Hmisc htmlTable lme4 MuMIn png ppcor psych stringi tidyr tidyverse tm wordcloud2]; }; + neverhpfilter = derive2 { name="neverhpfilter"; version="0.2-0"; sha256="0m4gbqnjw2nmhf25svznlf6pd0b0mslk52lpirmlj1iv04w1aq1i"; depends=[xts zoo]; }; ngram = derive2 { name="ngram"; version="3.0.4"; sha256="1q4y64dy7vcjikbfx20fpdiy1kwvxay4y90xr5j8d8zkqnva0way"; depends=[]; }; ngramrr = derive2 { name="ngramrr"; version="0.2.0"; sha256="1p8s4p3h27g647rxx9qjfad5dzbngjbmvhw4gz0jbsmfqrsf72by"; depends=[tau tm]; }; - ngspatial = derive2 { name="ngspatial"; version="1.2"; sha256="09sc67g7xyqzhmnzvnj6hhjkvkl3xzkwj1vi3idfl093g8m7x29v"; depends=[batchmeans Rcpp RcppArmadillo]; }; - ngstk = derive2 { name="ngstk"; version="0.1.1.1"; sha256="0ns5z2lmzh314sqkxfjmxxx8kblfibsbpj2y37l7gf9wf2yd4684"; depends=[configr data_table stringr]; }; + ngspatial = derive2 { name="ngspatial"; version="1.2-1"; sha256="1c65ws9b9s2grr44lqg8026c4p2875d0426dfmrakpb44mw2zppp"; depends=[batchmeans Rcpp RcppArmadillo]; }; + ngstk = derive2 { name="ngstk"; version="0.2.1"; sha256="12zpl20i07d1f9navs9jjrialfh798wrfn1241j7s9h3rd6xi40l"; depends=[configr data_table stringr]; }; nhanesA = derive2 { name="nhanesA"; version="0.6.4.3.3"; sha256="09mpxmk8w48hc14167jd2xifnj0kjz9h3h76bdnbb33wvhkn4jld"; depends=[Hmisc magrittr plyr rvest stringr xml2]; }; nhlscrapr = derive2 { name="nhlscrapr"; version="1.8.1"; sha256="107k063279w9cy6in99rn03w2rq42ci8s6dvb9x6f9w7y3bdpvzn"; depends=[biglm bitops RCurl rjson]; }; nhstplot = derive2 { name="nhstplot"; version="1.0.1"; sha256="1f07gfmbx80as54mlzdbs2z1vzc78rjy6i6m7zd4jplgcqdcynws"; depends=[ggplot2]; }; nice = derive2 { name="nice"; version="0.4-1"; sha256="1p8vmimiq9sbjvbx6c2wqwwkpnzw4kkdvjry6qyadmm3frwhj5qb"; depends=[]; }; nicheROVER = derive2 { name="nicheROVER"; version="1.0"; sha256="0sa7wfpzkin78vz48vwa5iac82v5l1s3zczdxz8sc2kyg22fj0aw"; depends=[mvtnorm]; }; nima = derive2 { name="nima"; version="0.4.5"; sha256="1fllq76k4r07ymd58s865hgg3yrmwa34kr5mjd89n50mm1m110mh"; depends=[assertthat devtools ggplot2 ggthemes gridExtra gtools plyr ProjectTemplate scales survival]; }; - nimble = derive2 { name="nimble"; version="0.6-8"; sha256="1mkqv6h6j4b1la3my6cwr20vjfmskbg286pr4phvg9gpp4f179b4"; depends=[coda igraph R6]; }; - nipals = derive2 { name="nipals"; version="0.3"; sha256="0zghzh2isfahz9qy6fw12fp848l12h01lldq99ac2nqikk28nm1n"; depends=[]; }; + nimble = derive2 { name="nimble"; version="0.6-9"; sha256="1lkf386qcgw5gr8cpxfh2ncrc9wj59icygi9m37c8077h3h0sj03"; depends=[coda igraph R6]; }; + nipals = derive2 { name="nipals"; version="0.4"; sha256="0h9jxmj44x3lllxk1y2izkslafbiab175qrsxlnfcvhnaj13zsds"; depends=[]; }; nivm = derive2 { name="nivm"; version="0.3"; sha256="111jkgirgsl1j36xgwi81wzwxial3vdw8mqzi1faldxxd9a2cixm"; depends=[bpcp ssanv]; }; nlWaldTest = derive2 { name="nlWaldTest"; version="1.1.3"; sha256="1cppdz8qvigjdz4sgr1gm2j09zi407xxmryc28zc7ps7rvgy344h"; depends=[]; }; nlcv = derive2 { name="nlcv"; version="0.3.2"; sha256="1lknlqd64p15lnkydbi7zx7lmhg1fdl750yjqjaccdjzrgrqvgkv"; depends=[a4Core Biobase e1071 ipred kernlab limma MASS MLInterfaces multtest pamr randomForest RColorBrewer ROCR xtable]; }; nleqslv = derive2 { name="nleqslv"; version="3.3.1"; sha256="1n1sbp7436yd5g6v0060j2iwk4rppjq2pc5x47g9wlwnskdfgvl7"; depends=[]; }; - nlme = derive2 { name="nlme"; version="3.1-131"; sha256="0k2nvdzhic6bzhfsbq6la6q6a1i5nlj4pnh6lpdxiiwvxdks3nkr"; depends=[lattice]; }; + nlme = derive2 { name="nlme"; version="3.1-131.1"; sha256="1xafi670a9jzb52kqxkacxfmy0viac3aql5byfq86kgkgla2sg0y"; depends=[lattice]; }; nlmeODE = derive2 { name="nlmeODE"; version="1.1"; sha256="1zp1p98mzbfxidl87yrj2i9m21zlfp622dfnmyg8f2pyijhhn0y2"; depends=[deSolve lattice nlme]; }; nlmeU = derive2 { name="nlmeU"; version="0.70-3"; sha256="05kxymgybziiijpb17bhcd9aq4awmp5km67l2py9ypakivi0hc6l"; depends=[nlme]; }; - nlmixr = derive2 { name="nlmixr"; version="0.9.0-1"; sha256="0alqi6c0x0cnycnqfqx7n2sgprcqlzzmzpcjhn71dz891ms5awh8"; depends=[BH brew dparser ggplot2 inline lattice lbfgs Matrix memoise minqa mvtnorm n1qn1 nlme numDeriv R_utils Rcpp RcppArmadillo RcppEigen rex RxODE StanHeaders]; }; + nlmixr = derive2 { name="nlmixr"; version="0.9.0-3"; sha256="1fwnq0bnsqadadgy9i1083dz4zkidwdxm2ncy6jyrk1pb055m318"; depends=[BH brew dparser ggplot2 inline lattice lbfgs Matrix memoise minqa mvtnorm n1qn1 nlme numDeriv PreciseSums R_utils Rcpp RcppArmadillo RcppEigen rex RxODE StanHeaders]; }; nlmrt = derive2 { name="nlmrt"; version="2016.3.2"; sha256="1g0qq0a933ay65gkp04qgn2wqk6vw79pj2a228c2ski4rcmkjxyn"; depends=[]; }; nlnet = derive2 { name="nlnet"; version="1.0"; sha256="1ipds80qlv2zrl51v0n670g9ihb68sm98p06nvs97w05i64g8frq"; depends=[coin fdrtool igraph TSP]; }; nloptr = derive2 { name="nloptr"; version="1.0.4"; sha256="1cypz91z28vhvwq2rzqjrbdc6a2lvfr2g16vid2sax618q6ai089"; depends=[]; }; @@ -8506,26 +8684,28 @@ in with self; { nlshelper = derive2 { name="nlshelper"; version="0.2"; sha256="02xnx0j8p1im1hdwnia3n51dicscjf8s33y475i3dczvhmivvbmf"; depends=[broom dplyr magicaxis mgcv nlme]; }; nlshrink = derive2 { name="nlshrink"; version="1.0.1"; sha256="0adnr7g3n3brwlvyix8wa7h59gj036l5anv8abqy80ysmfcmsp0y"; depends=[MASS nloptr]; }; nlsmsn = derive2 { name="nlsmsn"; version="0.0-4"; sha256="1gvpy8rq020l64bdw6n7kv354l7gwa2rgxarm6k0mqq7z21fxf58"; depends=[]; }; - nlsr = derive2 { name="nlsr"; version="2017.10.4"; sha256="0bzy4h0gy5j1ry8m6vz1bi2h8wbw93qn6vd59vvbvpsj9vrgb6fb"; depends=[digest]; }; + nlsr = derive2 { name="nlsr"; version="2018.1.28"; sha256="113g656j6zqdqip6dw55pimmwq36xrxgfyix10y3qqn9lxvqrpqq"; depends=[digest]; }; nlsrk = derive2 { name="nlsrk"; version="1.1"; sha256="0yqcsz5pdhqsrd86g0yx8bdac13fbmvg89phj3v4qvla2jfznjba"; depends=[]; }; nlstimedist = derive2 { name="nlstimedist"; version="1.1.1"; sha256="1222vj2w4f8xh7fkrzlyarr7980a6wj047p5p0nw3cfna3mmhi5b"; depends=[broom dplyr ggplot2 lazyeval minpack_lm nlstools]; }; nlstools = derive2 { name="nlstools"; version="1.0-2"; sha256="0mjn1j9fqqgr3qgdr0ki4lfbd0yrkanvya4y2483q3wklqa6qvjc"; depends=[]; }; nlt = derive2 { name="nlt"; version="2.1-3"; sha256="1j0xrrbr1hvfda8rvnc17lj96m6cz24faxvwn68ilf7j1ab2lkgn"; depends=[adlift EbayesThresh]; }; nlts = derive2 { name="nlts"; version="0.2-2"; sha256="0bx6xqa3j0k01p43vnv5lcv2pryjzgsak77y1cr9rm2xwqa3j6az"; depends=[acepack locfit]; }; nmaINLA = derive2 { name="nmaINLA"; version="0.1.1"; sha256="0976jafmdhy2rz5fcarb7hh1vaanm8l2610hk06f5k93xjhypg8j"; depends=[]; }; + nmathresh = derive2 { name="nmathresh"; version="0.1.2"; sha256="1ldxhk2ry3m8q0881fis403r303n431csmp0gp4785mafy476b5h"; depends=[ggplot2 gridExtra gtable Matrix nnls]; }; nmfem = derive2 { name="nmfem"; version="1.0.0"; sha256="0bkw27b59knppfh4qnhrcs2j0mpxak7iyb7lskccv6ibym2kvljw"; depends=[d3heatmap dplyr mixtools plyr tidyr]; }; nmfgpu4R = derive2 { name="nmfgpu4R"; version="0.2.5.2"; sha256="05066rgbbp6kj2d67nzf3d1pf32gypz9ammz4ba88yxblydb3cwk"; depends=[Matrix Rcpp SparseM stringr]; }; nmw = derive2 { name="nmw"; version="0.1.2"; sha256="1p2h13g0ss0v2jy0ii0r0qgf8i1f0dc8zhii05k2vr6cbiapslv3"; depends=[numDeriv]; }; nneo = derive2 { name="nneo"; version="0.1.0"; sha256="0jaaz15y1csh3bwmzp7mgx86m3f0w3ykzb8qdvg8ak2grxw3wl6a"; depends=[crul data_table fauxpas jsonlite tibble]; }; nnet = derive2 { name="nnet"; version="7.3-12"; sha256="17amqnw9dpap2w8ivx53hxha2xrm0drwfnj32li0xk41hlz548r7"; depends=[]; }; nnetpredint = derive2 { name="nnetpredint"; version="1.2"; sha256="1c6s9wm6vhylwv4xhp2hkllw18zj8hdr17ls9vlxm9qs3wx1v48w"; depends=[RSNNS]; }; - nnfor = derive2 { name="nnfor"; version="0.9"; sha256="0c74b0k80kygwb2namyzqd49xzakdcgblh63vzbp1dg8a95a835z"; depends=[forecast glmnet MASS neuralnet plotrix]; }; + nnfor = derive2 { name="nnfor"; version="0.9.2"; sha256="1wxv8s5547spw155rj7nlilsfn5d7m40xpfy87mady93n25pwm3d"; depends=[forecast glmnet MASS neuralnet plotrix]; }; + nngeo = derive2 { name="nngeo"; version="0.1.0"; sha256="1r92d5bgd7m9d6v424fry4hsbnwzhzww1sqrphwnk2aag70hqv0g"; depends=[geosphere lwgeom RANN sf units]; }; nnlasso = derive2 { name="nnlasso"; version="0.3"; sha256="1n7karlmgq61z9ywfx9xb5wvmxx40ydpnzzazj1xr70qlv5m0qk4"; depends=[]; }; nnls = derive2 { name="nnls"; version="1.4"; sha256="07vcrrxvswrvfiha6f3ikn640yg0m2b4yd9lkmim1g0jmsmpfp8f"; depends=[]; }; noaastormevents = derive2 { name="noaastormevents"; version="0.1.0"; sha256="1pkfmvp20f6xi2iy7l6c67zspp9f4wkrh7s308hlklms2difhp6m"; depends=[choroplethr choroplethrMaps data_table dplyr forcats ggplot2 htmltab hurricaneexposure lubridate maps plyr RColorBrewer stringr tidyr viridis XML]; }; nodeHarvest = derive2 { name="nodeHarvest"; version="0.7-3"; sha256="0nh3g50rk9qzrarpf29kijwkz9v60682i0ag77j2ipyvhhbpwpkc"; depends=[quadprog randomForest]; }; nodiv = derive2 { name="nodiv"; version="1.1.8"; sha256="0ws0yp4j26yf45gmbvb6dpq476z8mn8yl6xdrzs0yxliizpz8jsf"; depends=[ape picante raster sp vegan]; }; - nofrills = derive2 { name="nofrills"; version="0.2.0"; sha256="07c7hwml49dzslbxlq8m6h6xfya5a2s0fg177mv436387qrdyf1n"; depends=[rlang]; }; + nofrills = derive2 { name="nofrills"; version="0.3.0"; sha256="18hryq6clywlr2f45az6ryslkkarly45nacln4bwk6ip0yfl5s98"; depends=[rlang]; }; noia = derive2 { name="noia"; version="0.97.1"; sha256="0yldfmnb4ads4s9v9cj1js8zf1w1hxasqq6qjyzwknmvmp7kh62h"; depends=[]; }; noise = derive2 { name="noise"; version="1.0"; sha256="1a48s9vpz3nc058966lad8hydmg7z0vbzfwcf6nxc9g3c8mw4nig"; depends=[preprocessCore]; }; nomclust = derive2 { name="nomclust"; version="1.1.1106"; sha256="17hb89k72sw3ya0wm3n95mpx4vj7mpl4mzs8qwl2773dh2mcjgjq"; depends=[cluster dummies]; }; @@ -8536,9 +8716,9 @@ in with self; { noncomplyR = derive2 { name="noncomplyR"; version="1.0"; sha256="1a9m6r9cizw42nmy24jdsrsbllg5z84fs8b239axnh1fxzskg2qy"; depends=[MCMCpack]; }; nonlinearICP = derive2 { name="nonlinearICP"; version="0.1.2.1"; sha256="1m9a1f0yrbjl0nx2l7r76pyi78b2bxj8v4jx92yga91f975mw6np"; depends=[caTools CondIndTests data_tree randomForest]; }; nonlinearTseries = derive2 { name="nonlinearTseries"; version="0.2.3"; sha256="1pcah255hh3lqabxgjb5fsaap4s2d92lvxw9a48l1p4dkmm1lbsx"; depends=[Matrix Rcpp rgl TSA tseries]; }; - nonmem2R = derive2 { name="nonmem2R"; version="0.1.7"; sha256="1a3azvf9dbmi3l3crmkv1qvrd0j1d14x4s9hjk2r1cayiazpmbib"; depends=[lattice latticeExtra MASS mvtnorm xpose4]; }; - nonmemica = derive2 { name="nonmemica"; version="0.7.6"; sha256="0x4xfnl0yjaznpr5a80qmb721lcs9m6gsjyx3qr1jcd5pqhwm01z"; depends=[csv dplyr encode fold lazyeval magrittr metaplot rlang spec tidyr xml2]; }; - nonnest2 = derive2 { name="nonnest2"; version="0.4-1"; sha256="0lgcrxvyyw789hw80lqbxvvxl6z95qxzq9k5lphl5435xqzpfj6f"; depends=[CompQuadForm lavaan mvtnorm sandwich]; }; + nonmem2R = derive2 { name="nonmem2R"; version="0.1.8"; sha256="1250y5ylwfc3gwc0ilmzrwzk577bp7pj7bljvamzs3pqy4sflvrv"; depends=[ggplot2 lattice latticeExtra MASS mvtnorm]; }; + nonmemica = derive2 { name="nonmemica"; version="0.7.9"; sha256="0krixfwzxjalmj4b1ln79c1fxxx07qj71gzdddix3p056cdrxlyq"; depends=[csv dplyr encode fold lazyeval magrittr metaplot rlang spec tidyr xml2]; }; + nonnest2 = derive2 { name="nonnest2"; version="0.5-1"; sha256="02pflg6frvsq7azwcr660qj9mpj4q3kjx6xr6v5lshg77mjfhgdg"; depends=[CompQuadForm lavaan mvtnorm sandwich]; }; nonpar = derive2 { name="nonpar"; version="1.0.1"; sha256="0pxks3nga7jrcvq0pzr1axj3a9xvzky836fl7966a09ws1vff7i4"; depends=[]; }; nonparaeff = derive2 { name="nonparaeff"; version="0.5-8"; sha256="1kkn68m7cqlzx3v539cjxw3x5a2y86lvmyv2k98s87m3yvqg0gdk"; depends=[gdata geometry Hmisc lpSolve psych pwt rms]; }; nonrandom = derive2 { name="nonrandom"; version="1.42"; sha256="0icm23hw593322z41wmjkwxqknh2pa9kpzbrch7xw1mhp93sd5ll"; depends=[lme4]; }; @@ -8547,9 +8727,9 @@ in with self; { nopaco = derive2 { name="nopaco"; version="1.0.3"; sha256="1sbjgzd7q2gjhs5qsy23w30cv73d9d6g08ymq18wppqpir5hikh2"; depends=[Matrix]; }; nopp = derive2 { name="nopp"; version="1.1.0"; sha256="1zn3ss89i7fwqps6b8syd9jzm68k95p3fdlf285q819dzlk61ypk"; depends=[MASS mlogit]; }; nor1mix = derive2 { name="nor1mix"; version="1.2-3"; sha256="1bvk888qml9qr7q703s7qzgm0sqfchcjdjqwqllm5vrjx0cnapj3"; depends=[]; }; + nord = derive2 { name="nord"; version="0.0.1"; sha256="0ajymjn2xw7zik62nhjp11g8bkvsqhhsrzi3bl2k70y544wbl3kn"; depends=[ggplot2]; }; nordklimdata1 = derive2 { name="nordklimdata1"; version="1.2"; sha256="0c2hbh3qy8nrs275lxpzfgqsfgwp81m4kv0layvnjj09fcybm54x"; depends=[]; }; norm = derive2 { name="norm"; version="1.0-9.5"; sha256="01j1h412yfjx5r4dd0w8rhlf55997spgb6zd6pawy19rgw0byp1h"; depends=[]; }; - norm2 = derive2 { name="norm2"; version="2.0.1"; sha256="09447dng9px1ynfp382vjmh5iqdnhc7kxg28cbmqx7ncj1z5a2bm"; depends=[]; }; normalp = derive2 { name="normalp"; version="0.7.0"; sha256="1s12x2qln3s4bbqsm4p3cq4g6461z73r858g6ym1awamhbmncnrl"; depends=[]; }; normalr = derive2 { name="normalr"; version="0.0.3"; sha256="1ydlp6nbldq7sq60zdlvqah43xdfvx5nyiqaq2m5vgma6yny930x"; depends=[ddR magrittr MASS purrr shiny]; }; normtest = derive2 { name="normtest"; version="1.1"; sha256="073r2mwfs6c4vqh8921nlyygl0f20nhv997s0iwf00d3jckkc4pp"; depends=[]; }; @@ -8564,28 +8744,29 @@ in with self; { novelist = derive2 { name="novelist"; version="1.0"; sha256="0wzx0vkqvl9sfhbbrzylsxhm3qmjj5w8sy5w6gvd104fn84d49yk"; depends=[]; }; nowcasting = derive2 { name="nowcasting"; version="0.1.1"; sha256="02f6sd6baq5rqjfiz8a95zlgkijbs85l993wvlbma09kr54f1c3q"; depends=[corpcor DBI httr lubridate magic matlab Matrix RCurl RMySQL xts zoo]; }; noweb = derive2 { name="noweb"; version="1.0-4"; sha256="17s65m1m8bj286l9m2h54a8j799xaqadwfrml11732f8vyrzb191"; depends=[]; }; - np = derive2 { name="np"; version="0.60-3"; sha256="12hzmhh59dfifssj08bjwxszxy38irami70bq14dxlm48fjyz17g"; depends=[boot cubature quantreg]; }; + np = derive2 { name="np"; version="0.60-6"; sha256="1y72x5j9j9mcgcy2xizk31gl843hfkngxdn8s4qw7yhw2qj79hsr"; depends=[boot cubature quantreg]; }; npIntFactRep = derive2 { name="npIntFactRep"; version="1.5"; sha256="14ms66ppzb4jjsa3fparic6gdn913f6wv2ccjyb02j1ahs4iaa4g"; depends=[ez plyr]; }; npROCRegression = derive2 { name="npROCRegression"; version="1.0-5"; sha256="09ngfj0bd9cp19lpwsbknp2y71x36k03ph84bmf67wm1q2na7f93"; depends=[lattice]; }; - nparACT = derive2 { name="nparACT"; version="0.7"; sha256="0ia7s4gcqvcx02gybzizf6dsv75graknsjq7m74iplb2v6rzyywj"; depends=[ggplot2 stringr zoo]; }; + nparACT = derive2 { name="nparACT"; version="0.8"; sha256="0zwhz52j526n3xd21s7kghjaby56a8g296bkkc6scaa23zn1xg4b"; depends=[ggplot2 stringr zoo]; }; nparLD = derive2 { name="nparLD"; version="2.1"; sha256="1asq00lv1rz3rkz1gqpi7f83p5vhzfib3m7ka1ywpf2wfbfng27n"; depends=[MASS]; }; nparcomp = derive2 { name="nparcomp"; version="2.6"; sha256="111ypwyc885lvn64a5sb2k552j6wr3iihmhgx5y475axdiva5pzf"; depends=[multcomp mvtnorm]; }; nparsurv = derive2 { name="nparsurv"; version="0.1.0"; sha256="1qy9qkkpqrk49vjxbyvl25i4kfk0py6v64izd8lmaw38dynybpy2"; depends=[survival TH_data]; }; npbr = derive2 { name="npbr"; version="1.6"; sha256="1jvq4snwrwjhhjgm8n8yxd5y94ks5zzi0xwdn931yp300qnikyzc"; depends=[Benchmarking np quadprog Rglpk]; }; - npcopTest = derive2 { name="npcopTest"; version="1.02"; sha256="1avjhm6rzyawwaabch6cxc7w2if4631jwrd2l8lyd3nk39kpr8ch"; depends=[]; }; + npcopTest = derive2 { name="npcopTest"; version="1.03"; sha256="1kpa3avi95aa93y038f4zqhhdp8vdscdk0c6397qmqjg34hf1dnr"; depends=[]; }; npcp = derive2 { name="npcp"; version="0.1-9"; sha256="16vzl3psa806ns387d5mhlp369r45ljcqlhl0lzdjpc1niv572nc"; depends=[]; }; npde = derive2 { name="npde"; version="2.0"; sha256="1cp4k7jvsw9rc6rrck902nqqjaf2c1nxjic7i9r3fd6yca1lgqb9"; depends=[mclust]; }; nplplot = derive2 { name="nplplot"; version="4.5"; sha256="1dpbs0jb34gv0zj528357z1j2pwahjbp04rm7jir6qk0jhyaxxgh"; depends=[]; }; nplr = derive2 { name="nplr"; version="0.1-7"; sha256="1h3qv9dlw2gx8km3slyvrl588nif1n87df8xwmm6p75ziqhn2f56"; depends=[]; }; + npmlda = derive2 { name="npmlda"; version="1.0.0"; sha256="1dr25an7cac89jyb8zhmj3ry6lq7sh7zxci1injplnk4gzy17mc5"; depends=[]; }; npmlreg = derive2 { name="npmlreg"; version="0.46-1"; sha256="1gddl6diw8ix8vz7n1r4ps9cjx3q00mafpapskjk7pcz69m6hfv1"; depends=[statmod]; }; npmr = derive2 { name="npmr"; version="1.1"; sha256="1ss8ypvv6qcdxv7l3szivliwmhidmzi3572p3nz96ysndf56akl4"; depends=[]; }; npmv = derive2 { name="npmv"; version="2.4.0"; sha256="04lfks2rlax59gxdnbgkpmk2vaax718z6hkgsvmyxf52iby6rvlr"; depends=[Formula]; }; nppbib = derive2 { name="nppbib"; version="1.0-0"; sha256="075jb13zckkh66jwdmdlq4d2drjcc3lkj26px3w79b91223yymf2"; depends=[]; }; npphen = derive2 { name="npphen"; version="1.1-0"; sha256="0pbf9sqdapl5q09g1hj5hi4j2wigrd0b6s0gbv1gx4wn68alrals"; depends=[ks lubridate raster rgdal rts snow]; }; - npregfast = derive2 { name="npregfast"; version="1.5.0"; sha256="07myv5azz2dns7qi3qbr82v2cpjpnb16bf7h7nn56b68n8zmyrip"; depends=[doParallel foreach ggplot2 mgcv sfsmisc shiny shinyjs wesanderson]; }; + npregfast = derive2 { name="npregfast"; version="1.5.1"; sha256="0s9ci3nybzwykrgi9z2rqp6l15mqbxf759ks0clvkbm7wxv3whk5"; depends=[doParallel foreach ggplot2 mgcv sfsmisc shiny shinyjs wesanderson]; }; nprobust = derive2 { name="nprobust"; version="0.1.1"; sha256="0aynp42y0qn0jl9f26rk358hjdswkz6anwvni7frxnkb7l1vyrd5"; depends=[ggplot2 Rcpp RcppArmadillo]; }; - nproc = derive2 { name="nproc"; version="2.0.9"; sha256="0n2jjizwdrdf9jq409lv7z0bxvy7dk7lki6xfp5fmsdcd2dmshly"; depends=[ada e1071 glmnet MASS randomForest ROCR tree]; }; - npsf = derive2 { name="npsf"; version="0.2.0"; sha256="0cww1fi0amgc9n1hbfy3z7xgwrbcdwvsr2d6l8lpsr1bdcpgbjzv"; depends=[Formula]; }; + nproc = derive2 { name="nproc"; version="2.1.1"; sha256="0wpny7c1n9mmv1yywlws8gjbidkrikvcqcckrxpba9avjw2c5df8"; depends=[ada e1071 glmnet MASS naivebayes randomForest ROCR tree]; }; + npsf = derive2 { name="npsf"; version="0.3.1"; sha256="1mv2dzn3gc7b9ynpw8dv22xd31igg4hmkgrds12n9920pghkya44"; depends=[Formula Rcpp]; }; npsm = derive2 { name="npsm"; version="0.5"; sha256="12jq6ygp3di5rknh7izrr3bxvpn6bqnj3jhfxzf29yf0bd86hzqk"; depends=[plyr Rfit]; }; npsp = derive2 { name="npsp"; version="0.5-3"; sha256="0ck6iymfc73bzrifdc2sagcliz1yakqk1yv67a3ykha996jsrx99"; depends=[quadprog]; }; npst = derive2 { name="npst"; version="2.0"; sha256="1y5ij3nmh9pj6p97jpx75g26sk508mznr0l67cwj381zfb77hj1n"; depends=[]; }; @@ -8593,7 +8774,7 @@ in with self; { nricens = derive2 { name="nricens"; version="1.5"; sha256="0a7b4kw91qkr9vrm8swflby06a78d059im54zxxgvy42qjsijwqx"; depends=[survival]; }; nsRFA = derive2 { name="nsRFA"; version="0.7-12"; sha256="182zshwyg0l6shb5wcwibqygxs8qmgma9c4s683za8q3f9l94aqj"; depends=[]; }; nsROC = derive2 { name="nsROC"; version="1.0"; sha256="0c99z8kknbrnbyyv7p79sj848aq7b5n4m4r7v1yrcs61ackrdn2n"; depends=[sde survival]; }; - nscancor = derive2 { name="nscancor"; version="0.6"; sha256="1wkk08h8yz2mzgvmq0vr30iiczpbp0304vjwxqgsa3h240m4awsm"; depends=[]; }; + nscancor = derive2 { name="nscancor"; version="0.6.1-25"; sha256="183kvzlln5lhmi51dm0skq1165c3hhy1yz5h2g7nxwqk2b4p23xj"; depends=[]; }; nscprepr = derive2 { name="nscprepr"; version="0.1.1"; sha256="1rd32zywrzyxz6hpn9s6cwjlg8q8rz3cc0p3b5gan8bicx0ilwjc"; depends=[dplyr lubridate stringr]; }; nse = derive2 { name="nse"; version="1-00.17"; sha256="16zam539ir29m9ixyim9bqnf3sdy8aaaaly3wf96i3csgysf8pjc"; depends=[coda mcmc mcmcse np Rcpp sandwich sapa]; }; nsga2R = derive2 { name="nsga2R"; version="1.0"; sha256="04jj0a3isfc348vg46il5x9l33cr7xawz5w0mm4pwr6djhd8nfhx"; depends=[mco]; }; @@ -8607,7 +8788,7 @@ in with self; { numKM = derive2 { name="numKM"; version="0.1.0"; sha256="0pnwb7skp5jx5ibgfkympq59m9sf71gvk5zc0fwik539vrzfykdf"; depends=[survival]; }; numOSL = derive2 { name="numOSL"; version="2.3"; sha256="1bcj1qk3nx1jqhldx9rcwphvlxspz3bj4vb891hkw2fa2i4559c5"; depends=[]; }; numbers = derive2 { name="numbers"; version="0.6-6"; sha256="05qmv12b90vkzf2b50qjnp8hja6rms91jj97knx70n2yhpb2lnd9"; depends=[]; }; - numform = derive2 { name="numform"; version="0.3.0"; sha256="1lxb4gqa5z3ncrh95i10cnv3kxnvc4lqs7yypdhqn5yidddvcydj"; depends=[]; }; + numform = derive2 { name="numform"; version="0.4.0"; sha256="09vim4ajnnkdf27ag5j8pj7p8qyfakfh3ar1dki8bqzms2d7bkcm"; depends=[]; }; nutshell = derive2 { name="nutshell"; version="2.0"; sha256="1v11g5wqyxnj29b7akl0cwa34hcqs79ijbiv735pg3df4ggyrzvm"; depends=[nutshell_audioscrobbler nutshell_bbdb]; }; nutshell_audioscrobbler = derive2 { name="nutshell.audioscrobbler"; version="1.0"; sha256="10fvc5d22gnfb0bkgbww48f0vvcaja96g5gfv85kap939j11172j"; depends=[]; }; nutshell_bbdb = derive2 { name="nutshell.bbdb"; version="1.0"; sha256="19c4047rjahyh6wa6kcf82pj09smskskvhka9lnpchj13br8rizw"; depends=[]; }; @@ -8620,10 +8801,8 @@ in with self; { oaColors = derive2 { name="oaColors"; version="0.0.4"; sha256="040sdqrk9dciylnnrrshlj06s9qhvngii9shx1p8412ip7mk8r1m"; depends=[MASS RColorBrewer]; }; oaPlots = derive2 { name="oaPlots"; version="0.0.25"; sha256="0c5ig1ar02vg38pjjmp3gd53ij1j7pzajs0zrlfajz141qkv2ysr"; depends=[ggplot2 oaColors]; }; oai = derive2 { name="oai"; version="0.2.2"; sha256="0q1w29wrppi5sfabdw8px7zr92bgri3jhy0y7dhi46xggxfg9vm1"; depends=[httr plyr stringr tibble xml2]; }; - oapackage = derive2 { name="oapackage"; version="2.0.23"; sha256="1kkwxwgb23i4m8dlh1ybskardwf8ql0m18cv9c5zi1qd2vkk5dx0"; depends=[RcppEigen]; }; oaqc = derive2 { name="oaqc"; version="1.0"; sha256="1rc0l79xygmr2rp5sjadzigbj65a13z5xlvrxzy26cl0wsxwhmjf"; depends=[]; }; - oasis = derive2 { name="oasis"; version="2.1"; sha256="0yh54vip2bx1ifpc3d7acr9488i3w9iyh3gl209fivnrn555plqf"; depends=[fslr mmand neurobase oro_nifti]; }; - oaxaca = derive2 { name="oaxaca"; version="0.1.3"; sha256="0pi3lrvx5cjl35hww9w8bwh0720zibph636c2ay38k83lzf3kcb8"; depends=[Formula ggplot2 reshape2]; }; + oaxaca = derive2 { name="oaxaca"; version="0.1.4"; sha256="12w5l2a8i2964rxy9km2srlycx35y7ia8p07ra7gsxr4h8156z3c"; depends=[Formula ggplot2 reshape2]; }; obAnalytics = derive2 { name="obAnalytics"; version="0.1.1"; sha256="1l4ld120qk0adycmvqrkzada10kb7z03lj2njzqagmacl1z8598f"; depends=[ggplot2 reshape2 zoo]; }; objectProperties = derive2 { name="objectProperties"; version="0.6.5"; sha256="0wn19byb1ia5gsfmdi6cj05pnlxbr3zcrjabjg3g1d7b58nz7wlh"; depends=[objectSignals]; }; objectSignals = derive2 { name="objectSignals"; version="0.10.2"; sha256="1rcgfq1i3nz2q93vv4l069f3mli1c6fd5dhhhw1p7cc4sy81008w"; depends=[]; }; @@ -8632,31 +8811,31 @@ in with self; { obs_agree = derive2 { name="obs.agree"; version="1.0"; sha256="191xshnrncjqzwd2rdq334vsx0338q3y3k1nbm04hdaysbnla9jv"; depends=[]; }; obsSens = derive2 { name="obsSens"; version="1.3"; sha256="1vfm1mzsycwkqa39vf3fcdv1s6adps9hw1rxlvl8v9kq746hcabw"; depends=[]; }; observer = derive2 { name="observer"; version="0.1.2"; sha256="1027827k57qb4xppx0xxxffd1s3n7pz754irdx3v1v3piix8xi8m"; depends=[bazar bit dplyr lazyeval magrittr tibble]; }; - oc = derive2 { name="oc"; version="0.98"; sha256="17xhclysp91mqcg4bckd9yz7d69znyvmjrqxvpzayf9mm5h875vg"; depends=[pscl]; }; + oc = derive2 { name="oc"; version="1.01"; sha256="12idrh4jxxq28lgqzr6jzgrvmmwysh5amzhmmaqn3yz49i17gcaf"; depends=[pscl]; }; occ = derive2 { name="occ"; version="1.0"; sha256="1rpgq6mqrdzz52ln897f5k8yyz5i14s3lxqmy3nwsxf3q2bdf3yh"; depends=[]; }; - oce = derive2 { name="oce"; version="0.9-22"; sha256="0wxgk4hr5s0kz3qby7zwrp8pdpcwb4p67mrza5gh90kv0hfirnjh"; depends=[gsw testthat]; }; - oceanmap = derive2 { name="oceanmap"; version="0.0.9"; sha256="07awxbj0gc1k8f6myqk5g54qk1n3bammrpfqi0rbfambgzrw3n5c"; depends=[abind extrafont fields mapdata maps maptools marmap ncdf4 plotrix raster sp]; }; + oce = derive2 { name="oce"; version="0.9-23"; sha256="0k5h6k4y9bas2aqwkh1dkxmwgx4d41hxy87zfih5iq8ff61d03rr"; depends=[gsw testthat]; }; ocedata = derive2 { name="ocedata"; version="0.1.3"; sha256="0lzsyaz8zb6kiw86fnaav2g2wfdhyicxvm81ly5a9z4mjch3qj02"; depends=[]; }; ockc = derive2 { name="ockc"; version="1.0"; sha256="0chzrs3ipa2518r4d35z4fxffgq12p1mwj0hzkxw19gdgq6aa8s7"; depends=[flexclust modeltools]; }; ocomposition = derive2 { name="ocomposition"; version="1.1"; sha256="0fk8ia95yjlvyvmjw7qg72piqa40kcqq9wlb3flc6a81pys1ycb5"; depends=[bayesm coda]; }; - odbc = derive2 { name="odbc"; version="1.1.3"; sha256="117qj3bjfrnq58nlzq48128zk18xmnixl20b83cqrf1gqa12svg1"; depends=[BH bit64 blob DBI hms Rcpp]; }; + odbc = derive2 { name="odbc"; version="1.1.5"; sha256="0wsi2sv51v4ij3b72lzn8jlsc5d45hyj4qmr4iygpimflqsibjqm"; depends=[BH bit64 blob DBI hms Rcpp]; }; odds_converter = derive2 { name="odds.converter"; version="1.4"; sha256="13y3s04l2jvjhn1i4syz4y3q42ba8br0sp3mks5f5h4cp8w4j3wy"; depends=[]; }; - oddsratio = derive2 { name="oddsratio"; version="1.0.0"; sha256="19xihbdcyx19lbvylpzqwgdf7ij043zfn7cz5v7ax5byhhz26vdk"; depends=[cowplot ggplot2 MASS mgcv]; }; + oddsratio = derive2 { name="oddsratio"; version="1.0.2"; sha256="0s9w5iqcabkc7lqdh27nmg7xnw2jpwik5djjlqxb6xgabzls97d6"; depends=[cowplot ggplot2 MASS mgcv]; }; odeintr = derive2 { name="odeintr"; version="1.7.1"; sha256="0wfb5lgv10p0qyfbn9hdg14bda37v43lpgbwv6nbw63zzbsbazqi"; depends=[BH Rcpp]; }; odfWeave = derive2 { name="odfWeave"; version="0.8.4"; sha256="1rp9j3snkkp0fqmkr6h6pxqd4cxkdfajgh4vlhpz56gr2l9j48q5"; depends=[lattice XML]; }; odfWeave_survey = derive2 { name="odfWeave.survey"; version="1.0"; sha256="0cz7dxh1x4aflvfrdzhi5j64ma5s19ma8fk9q2m086j11a1dw3jn"; depends=[odfWeave survey]; }; odk = derive2 { name="odk"; version="1.5"; sha256="0fcnr4c1clwx1sk6fgg4cx506gdi90n2h05g0i47p4s5bra0qwwl"; depends=[gsheet openxlsx]; }; + odkr = derive2 { name="odkr"; version="0.1.3"; sha256="0vcpsykr4sq4rq721vyd3wbm4jzlldvvxqh75q7x7wwhjhrnr3qn"; depends=[Hmisc stringr]; }; odpc = derive2 { name="odpc"; version="1.0.0"; sha256="1mhak9drp0a7h1yrbk08cs00hbvkfkj8r1y6klhr40sdych4q506"; depends=[forecast gdpc Rcpp RcppArmadillo]; }; - odr = derive2 { name="odr"; version="0.3.2"; sha256="0bp6aw0mv649clrm84firm4wdrxardpzgwaqddkzi222czgba7is"; depends=[]; }; - oec = derive2 { name="oec"; version="2.5"; sha256="0dg74nwiyfag70dg37xivm3s042jfip259c001c3nlwi3ajcfsb9"; depends=[curl dplyr jsonlite readr servr]; }; - oem = derive2 { name="oem"; version="2.0.6"; sha256="1q8nwxmf9gizwsn2795qah7f4fb8zhygqxj6kwdy5j7afr1h3zjz"; depends=[BH bigmemory foreach Matrix Rcpp RcppArmadillo RcppEigen]; }; - officer = derive2 { name="officer"; version="0.1.8"; sha256="1qq74qsrq078hnq3m6phq0xmblq8yzzwf6qpdbd3vmjgjg55nbgc"; depends=[base64enc digest dplyr ggplot2 htmltools magrittr purrr R_utils R6 Rcpp tibble uuid xml2 zip]; }; + odr = derive2 { name="odr"; version="0.7.3"; sha256="07jfd809wv92ijgw1r1nq9516zi2rkf3ik243br42glf6lszn19p"; depends=[]; }; + oec = derive2 { name="oec"; version="2.5.2"; sha256="17np562cv6ln3j4b9iawyhbz8kfd5cy1ifj96kzyhv082jgpsk1s"; depends=[dplyr jsonlite magrittr readr servr]; }; + oem = derive2 { name="oem"; version="2.0.7"; sha256="12z6cgkm8yyk9dz3s1bswccn7vrvca2wiqz0ylr65q88ws828snz"; depends=[BH bigmemory foreach Matrix Rcpp RcppArmadillo RcppEigen]; }; + officer = derive2 { name="officer"; version="0.2.1"; sha256="0l8xj6zsklh2dyl6kn4piv5wjalqm1ifakxh31zfz714s9w0y8qj"; depends=[base64enc digest htmltools magrittr R_utils R6 Rcpp uuid xml2 zip]; }; oglmx = derive2 { name="oglmx"; version="2.0.0.3"; sha256="02skdnf89ryl4d8ja1a9mj1jzzmjqjgfdcsf6v5dpjn1z9aycc6c"; depends=[maxLik]; }; oii = derive2 { name="oii"; version="1.0.2.1"; sha256="1n41hikn53ikyynsravg127cw5csa8s0s1l63w5hym7c6j625ya5"; depends=[Deducer gmodels rapportools]; }; okcupiddata = derive2 { name="okcupiddata"; version="0.1.0"; sha256="1l04rr4yr73a6q2am9ylyr5prf347hkf2jx735w78rsb6472kbaq"; depends=[]; }; okmesonet = derive2 { name="okmesonet"; version="0.1.5"; sha256="1kzyzmg702ayzphn9jsk64m51mlnz37ylxiwq5gsr23vaiida680"; depends=[plyr]; }; olctools = derive2 { name="olctools"; version="0.3.0"; sha256="1gbchwynvmryarz32f24v56kj57h7x6nrrm878fkjkpq140cqwzz"; depends=[Rcpp]; }; - olsrr = derive2 { name="olsrr"; version="0.3.0"; sha256="0y5s11bqkir4wllk2aigll8791hw5pxn9qk9i32n9d8h5s88spdg"; depends=[dplyr ggplot2 goftest gridExtra magrittr nortest purrr Rcpp tibble tidyr]; }; + olsrr = derive2 { name="olsrr"; version="0.4.0"; sha256="0ka8a6gm4ynbr2ss4syw2znnqcjly209sh992shyzp01yp5vy7bm"; depends=[dplyr ggplot2 glue goftest gridExtra magrittr nortest purrr Rcpp recipes rlang shiny stringr tibble tidyr]; }; omd = derive2 { name="omd"; version="1.0"; sha256="0s1wcgivqapbkzjammga8m12gqgw113729kzfzgn02nsfzmsxspv"; depends=[]; }; omics = derive2 { name="omics"; version="0.1-5"; sha256="1y2x33mfgq98nglhvpr1wq1v6nfiq4njy2yac47x72rpwxsj9vb1"; depends=[lme4 pheatmap]; }; ompr = derive2 { name="ompr"; version="0.7.0"; sha256="06zhmddg19sjnl18zmjjswggjg58rjgarqj2wqf5jf0g0qz3my2n"; depends=[dplyr lazyeval Matrix progress Rcpp]; }; @@ -8664,7 +8843,7 @@ in with self; { oncomodel = derive2 { name="oncomodel"; version="1.0"; sha256="1jyyq9znffiv7rg26mjldbwc5yi2f4f8npsd2ykhxyacb3g96fp1"; depends=[ade4]; }; onehot = derive2 { name="onehot"; version="0.1.1"; sha256="1cdsz007wr054k5phvihhg4qx0fc039k2s6484m92kws8mb2ziix"; depends=[]; }; onemap = derive2 { name="onemap"; version="2.1.1"; sha256="0j9c0ynwpzyr548n72wzmmk8gi52qvxlxgzqzn8g6n4v5zmzlkhy"; depends=[fields ggplot2 maps Rcpp reshape2 tkrplot]; }; - onewaytests = derive2 { name="onewaytests"; version="1.5"; sha256="0v975sjh4x9n0796547l84mdvjj9a0jqy8gdpfb7970v2m8srb5q"; depends=[car ggplot2 moments nortest]; }; + onewaytests = derive2 { name="onewaytests"; version="1.6"; sha256="0xxqsqnk0s9w0xjj3ixghm9d1yg9fhq5lc5xyicfimnigb13hddl"; depends=[car ggplot2 moments nortest]; }; onion = derive2 { name="onion"; version="1.2-7"; sha256="17jx7saxcsahyyivln4v9fzzcmidy6ygjd9n81skv5jpr491zkgk"; depends=[]; }; onlinePCA = derive2 { name="onlinePCA"; version="1.3.1"; sha256="08qivsfnwz5vp089lv9czsaz3nfi42kn9yhgzf27dji18y2xscic"; depends=[Rcpp RcppArmadillo RSpectra]; }; onls = derive2 { name="onls"; version="0.1-1"; sha256="0m7pnlzkqwzi6jncjzxzfvznipd4wg03zd9fc0ymwm9jvhm4p14g"; depends=[minpack_lm]; }; @@ -8673,7 +8852,6 @@ in with self; { ontologySimilarity = derive2 { name="ontologySimilarity"; version="2.2"; sha256="1g1ag2bnfczdx2xyswrc9xbl9krnyibb4639wynm7c0lf2876964"; depends=[ontologyIndex Rcpp]; }; oompaBase = derive2 { name="oompaBase"; version="3.2.5"; sha256="0269jmdw236jy008ic6iwg9y2fq674alqvd5zdvy1k2grxm72hvw"; depends=[cluster]; }; oompaData = derive2 { name="oompaData"; version="3.1.1"; sha256="0by9qfxlx6fdmp12qnphlli5hdn5balvx4ckg64fw6vwa291g7b0"; depends=[]; }; - opefimor = derive2 { name="opefimor"; version="1.2"; sha256="06j5diwp42x7yrhclwyiimfwmx66y23dkwlnkd2lj2zcsgam9s8w"; depends=[]; }; openEBGM = derive2 { name="openEBGM"; version="0.3.0"; sha256="04wj9z3w7dvdk818iv0xdqlkrc83frsf5sh1xs8bnbp6g0781jqn"; depends=[data_table ggplot2]; }; openNLP = derive2 { name="openNLP"; version="0.2-6"; sha256="1173cng877sg6ynbs3csfnn956wwrq3yldhhzfbqdsz35draganj"; depends=[NLP openNLPdata rJava]; }; openNLPdata = derive2 { name="openNLPdata"; version="1.5.3-4"; sha256="0j45rh9qki8r5wavaysrfsvb3wc3x8jjicqff2yi0r34j58xvlv8"; depends=[rJava]; }; @@ -8681,13 +8859,12 @@ in with self; { openVA = derive2 { name="openVA"; version="1.0.3"; sha256="09wbhl0g6q1rhi6yr3wpbns4ik7jalpagacn6am09i6zvmz8745j"; depends=[ggplot2 InSilicoVA InterVA4 nbc4va Tariff]; }; openadds = derive2 { name="openadds"; version="0.2.0"; sha256="1jb8zd3rpxfkjkg895iab6m4cfi53p5vy3nnpjkgq7ym6499qjcv"; depends=[crul dplyr jsonlite maptools rappdirs readr tibble xml2]; }; openair = derive2 { name="openair"; version="2.1-5"; sha256="19fqg05swsxqs19gi125h9xq43s44fxg51q05y4fhgsvxbvd7aj9"; depends=[cluster dplyr hexbin lattice latticeExtra lazyeval lubridate mapproj MASS mgcv plyr RColorBrewer Rcpp reshape2]; }; - opencage = derive2 { name="opencage"; version="0.1.2"; sha256="1wnv5mgapdnkpg62sv0375jac2rdnchggjfjnr07bziwpf3xj74d"; depends=[dplyr httr jsonlite memoise]; }; + opencage = derive2 { name="opencage"; version="0.1.4"; sha256="1lqs38lml73axsjlsjkmcsb2irgs40mjrx2cn3k0bjb63qyb9hf5"; depends=[dplyr httr jsonlite memoise]; }; opencpu = derive2 { name="opencpu"; version="2.0.5"; sha256="1bs2z3y2zc3aqzfjh6bq3qrpzm106f5xhw7lbyng1bpcp4rch6y3"; depends=[brew curl devtools evaluate httpuv jsonlite knitr mime openssl protolite rappdirs sendmailR sys webutils zip]; }; opendotaR = derive2 { name="opendotaR"; version="0.1.4"; sha256="17cygsw3nkg6zincfrcdh1509rlz3n5zrv9wvv7mjngm61sn79nf"; depends=[dplyr jsonlite lubridate]; }; openintro = derive2 { name="openintro"; version="1.7.1"; sha256="059azlasdkmp8f54qpjf3mq5dyqakw0dgx0kx85wfdmhq38zal5n"; depends=[]; }; - openssl = derive2 { name="openssl"; version="0.9.9"; sha256="1ir7ggs0rxgn83h40r6jg9dzhb7hbcwhkcj5nsdzj7jz61sfgv77"; depends=[]; }; + openssl = derive2 { name="openssl"; version="1.0"; sha256="1j8smqrb79lnaf2n9icksjiy641fcazsbkhmgg916s3nnyjngjz3"; depends=[]; }; opentraj = derive2 { name="opentraj"; version="1.0"; sha256="13nqal96199l8vkgmkvl542ksnappkscb6rbdmdapxyi977qrgxk"; depends=[doParallel foreach maptools openair plyr raster reshape rgdal sp]; }; - openwindfarm = derive2 { name="openwindfarm"; version="0.1.0"; sha256="1f1pmp1h283ypyl0bz54ps0b6hwax59mmlfl0qzickmq4wjdn0qz"; depends=[anytime dplyr foreach httr leaflet magrittr readr]; }; openxlsx = derive2 { name="openxlsx"; version="4.0.17"; sha256="1mq4lasp12kc30sxcsmz9gskd114l8s7z7wd6svv2nm8qllrhsqi"; depends=[Rcpp]; }; opera = derive2 { name="opera"; version="1.0"; sha256="0p2wg3srg088l420ykrq0wqvzh1mp6l753rdw35f7kdmaj08mqfq"; depends=[quadprog quantreg RColorBrewer]; }; operator_tools = derive2 { name="operator.tools"; version="1.6.3"; sha256="1v4dg7xhz24dnp0zxn815x1405ig64ibii6y40la1gvmzcc41dz5"; depends=[]; }; @@ -8702,26 +8879,26 @@ in with self; { optbdmaeAT = derive2 { name="optbdmaeAT"; version="1.0.1"; sha256="1y1mvcyjihpj1wgjmifhmd10717wr1srp7h87azs4gfypgsiqchn"; depends=[igraph MASS Matrix]; }; optextras = derive2 { name="optextras"; version="2016-8.8"; sha256="03wqz16q8kn0ndk241h541fa0g5y0nrfg17vph85cm5xvzdd14cc"; depends=[numDeriv]; }; optiRum = derive2 { name="optiRum"; version="0.37.3"; sha256="1g3kgfwa7ckh45v14qdi3gq9vy0zfpjaffcgpfapyylrsrnspy3f"; depends=[AUC data_table ggplot2 knitr plyr scales stringr XML]; }; - optiSel = derive2 { name="optiSel"; version="1.0.0"; sha256="01ia01byp4fnclafr727bjiww8k8cygzbjlrk4i2qpbd0jp2hm6w"; depends=[data_table doParallel ECOSolveR foreach kinship2 magic MASS Matrix nadiv optiSolve pedigree plyr pspline quadprog Rcpp RcppArmadillo stringr]; }; + optiSel = derive2 { name="optiSel"; version="2.0"; sha256="1k8xbxabbzrlyqb12zdd3jyd8i1cfppah8m8sdkc40y02llgzgyv"; depends=[data_table doParallel ECOSolveR foreach kinship2 magic MASS Matrix nadiv optiSolve pedigree plyr pspline purrr quadprog Rcpp RcppArmadillo reshape2 stringr]; }; optiSolve = derive2 { name="optiSolve"; version="0.1"; sha256="1wnpj7z0vqf91gzgz6r2ympnljq4mczxnnyk3sq7gvf6df4ic2m1"; depends=[alabama cccp MASS Matrix nloptr plyr Rcpp Rcsdp shapes stringr]; }; - opticut = derive2 { name="opticut"; version="0.1-0"; sha256="0dh7zw8yrzxw3vfzfm776rdhfczmlwfs3fw568s5cc60xsn8fa93"; depends=[betareg MASS mefa4 pbapply pscl ResourceSelection]; }; + opticut = derive2 { name="opticut"; version="0.1-2"; sha256="1j479wa7mlp62c2y7shha1w7ybhfy8wvjfaz27kmwd1f61ma1g0l"; depends=[betareg MASS mefa4 pbapply pscl ResourceSelection]; }; optifunset = derive2 { name="optifunset"; version="1.0"; sha256="18pvdl04ln1i0w30ljdb3k86j27zg2nvrn3ws54c1g6zg9haqhbg"; depends=[]; }; optigrab = derive2 { name="optigrab"; version="0.7.3"; sha256="1vd4b6mh4a137nvsbpx71jibfd67va1m8iya1gasqiflm6qzszcx"; depends=[magrittr stringi]; }; optim_functions = derive2 { name="optim.functions"; version="0.1"; sha256="1la3v8yd9cdichp3mka4x86hr9lynh6qfg7h9ab6cwijw6kzkn6g"; depends=[lhs randtoolbox stringr]; }; optimbase = derive2 { name="optimbase"; version="1.0-9"; sha256="0ivz24kf3yacgq5bl3s3az1pcyhsz0cza5f8vdksy5gchwqplm8n"; depends=[Matrix]; }; optimization = derive2 { name="optimization"; version="1.0-7"; sha256="09s62ax3w8zijfp2cmh2lvdqbl3nijbjkwq4n3icasi53lzg2179"; depends=[colorspace Rcpp]; }; optimr = derive2 { name="optimr"; version="2016-8.16"; sha256="02dgwkcjhf6ciwb6x6gyk7nn4v2jras7l1icfd4pjbypiapwnck9"; depends=[numDeriv optextras Rcgmin Rvmmin setRNG]; }; - optimsimplex = derive2 { name="optimsimplex"; version="1.0-6"; sha256="1hbcd2pq8hlr9vh5k1hh8icr0zyri9ar4k8iq93kpfqpfif9vppp"; depends=[optimbase]; }; - optimus = derive2 { name="optimus"; version="0.1.0"; sha256="1dz0wczyl1awv3s01malmyrzwijxdywh0xhpfh1i0pncbb4rq3vc"; depends=[mvabund ordinal]; }; + optimsimplex = derive2 { name="optimsimplex"; version="1.0-7"; sha256="1if32133556zwmijlz6085fg1h65442hy03lzia0ahap3yndqfqy"; depends=[optimbase]; }; + optimus = derive2 { name="optimus"; version="0.2.0"; sha256="01njyjfrm6kjwx2qq41c0hsgxzydnrmr3538cpbfdn5i0z5blgyx"; depends=[mvabund ordinal]; }; optimx = derive2 { name="optimx"; version="2013.8.7"; sha256="0pbd7s02isj24npi4m1m1f008xqwzvwp3kn472wz8nmy4zrid30s"; depends=[BB dfoptim minqa numDeriv Rcgmin Rvmmin setRNG svUnit ucminf]; }; optional = derive2 { name="optional"; version="1.0"; sha256="1bh3w5mcv3rhlpklncwgjr0lmjhv164q17zls0xm00qr8knzm9kp"; depends=[magrittr]; }; optiscale = derive2 { name="optiscale"; version="1.1"; sha256="1c263w9df66m7lgvzpdfm2zwx9nj8wcdpgh5gijachr2dzffmrp2"; depends=[lattice]; }; optismixture = derive2 { name="optismixture"; version="0.1"; sha256="0nacfbqlnzajp1hfhf0yzm2d86fxpp4kw2zy33q8k2d4sr56bird"; depends=[Matrix mvtnorm]; }; - optmatch = derive2 { name="optmatch"; version="0.9-7"; sha256="1ps3qd7kidi0n1m9nxspz03sdw7p3lcg31q3p7c13l3vb226i5yj"; depends=[digest Rcpp RItools survival]; }; + optmatch = derive2 { name="optmatch"; version="0.9-8"; sha256="1fmk60yyrxgzi24f7a1r7vsbny8064ibm8dmx2h4xvslc1ynxa4c"; depends=[digest Rcpp RItools survival]; }; optparse = derive2 { name="optparse"; version="1.4.4"; sha256="1ff4wmsszrb3spwfp7ynfs8w11qpy1sdzfxm1wk8dqqvdwris7qb"; depends=[getopt]; }; optpart = derive2 { name="optpart"; version="2.3-0"; sha256="125b9sfdk4bdcj1vq5rxlrskv1zra31x8d96pdxnqvcnkmwxm4zh"; depends=[cluster labdsv MASS plotrix]; }; optrcdmaeAT = derive2 { name="optrcdmaeAT"; version="1.0.0"; sha256="16g4612mwyfsckn6l71fbrjnnjv4yvnac1cccbrn3k8jh07qgb1h"; depends=[igraph MASS Matrix]; }; - optrdd = derive2 { name="optrdd"; version="0.9"; sha256="1l27rs4ry8qsak7fbdnx06bwhzyp432d4slj4bb18agm192j1rq3"; depends=[Matrix quadprog]; }; + optrdd = derive2 { name="optrdd"; version="1.0"; sha256="0261dwx7g8vxpnwgr53g1qhlwf12sjrb3zb7d02viaxg8fpk61k7"; depends=[CVXR Matrix quadprog]; }; optrees = derive2 { name="optrees"; version="1.0"; sha256="1zqpjii8dsfs98n58qpif81ckvyxkr0661svhlbgzi19xb2vszqs"; depends=[igraph]; }; opusminer = derive2 { name="opusminer"; version="0.1-0"; sha256="1m4gsjylz58pbmhgcy4l9hqdsgy8ra1zg0d3rb6h2qiwfyfm0yh4"; depends=[arules Matrix Rcpp]; }; orQA = derive2 { name="orQA"; version="0.2.1"; sha256="0vivjrpcbql42y078gi91kfpfdpv73j23jkiv8fpazzwzdi8ydqq"; depends=[genefilter gtools nlme Rcpp]; }; @@ -8739,10 +8916,10 @@ in with self; { orderstats = derive2 { name="orderstats"; version="0.1.0"; sha256="0a3ga0cjryvbininspsx5wzc96s3fza06s3d5fhbllbixz0rap4a"; depends=[]; }; ordiBreadth = derive2 { name="ordiBreadth"; version="1.0"; sha256="04faqhas1p9lxhghd4xq07yq1nxv7ns18avhvkql7sy5a9g7bfs1"; depends=[vegan]; }; ordinal = derive2 { name="ordinal"; version="2015.6-28"; sha256="0lckjzjq2k8rlibrjf5s0ccf17vcvns5pgzvjjnl3wibr2ff4czs"; depends=[MASS Matrix ucminf]; }; - ordinalClust = derive2 { name="ordinalClust"; version="1.2"; sha256="1h31wd6sd73aaf2zphjcqna89dfkg0wh15nzj8pxbvdk8q8nrd37"; depends=[progress Rcpp RcppArmadillo]; }; - ordinalCont = derive2 { name="ordinalCont"; version="1.2"; sha256="0a30yba3gmhrl4ln47kk046fk9wqn32hjkqwmrhzjyzl3w4jq8jz"; depends=[boot]; }; + ordinalClust = derive2 { name="ordinalClust"; version="1.2.1"; sha256="1035471ni5f8129w23kkj7263p5pa9jlihqdq2skda410lj50vnk"; depends=[progress Rcpp RcppArmadillo]; }; + ordinalCont = derive2 { name="ordinalCont"; version="1.3.0"; sha256="0zi9cfvkb811hhcplp159zpnmmk4rs0nid19gi4g9g3dgn9pa296"; depends=[boot]; }; ordinalForest = derive2 { name="ordinalForest"; version="2.1"; sha256="1ancr7xdwhbqq3rj5hijrkjbrcaih8rqcx5r41mykrrp1k1s55dd"; depends=[combinat ggplot2 Rcpp]; }; - ordinalNet = derive2 { name="ordinalNet"; version="2.3"; sha256="1a7bl5478s6vdaav480rrlw5ksdx3bgjibafag66w2v6hrx42acl"; depends=[]; }; + ordinalNet = derive2 { name="ordinalNet"; version="2.4"; sha256="0c9k3p62d482sl0vg94xm6hllk2mic2nd1c5m4vhci5ycavqzdd3"; depends=[]; }; ordinalgmifs = derive2 { name="ordinalgmifs"; version="1.0.3"; sha256="0ki91l6vvfxpzq7zgl3d08r5pzx47jxkgf7g0g95580xx2q7n7zx"; depends=[survival]; }; ore = derive2 { name="ore"; version="1.6.0"; sha256="115s3wq7rrpmx65k9jlpf2x1d218gnl7vsc8zsvmjbsi4gfyliwf"; depends=[]; }; ores = derive2 { name="ores"; version="0.3.1"; sha256="12war455cfcn2llig7pkx05b70dp5y7warjq03ayqq6i7c945mhb"; depends=[httr]; }; @@ -8768,6 +8945,7 @@ in with self; { osi = derive2 { name="osi"; version="0.1.0"; sha256="1wzkvsqifk0g29jnpvykn26myq27pxll3glqlp74djkz0rbpv7aa"; depends=[httr]; }; osmar = derive2 { name="osmar"; version="1.1-7"; sha256="0q6d8nw7d580bnx66mjc282dx45zw9srczz90b520hjcli4w3i3r"; depends=[geosphere RCurl XML]; }; osmdata = derive2 { name="osmdata"; version="0.0.5"; sha256="12zfpgp4x5akh25w1f01g5rv4nqqzn2wwysak4vvwh8h7iha0ajc"; depends=[curl httr jsonlite lubridate magrittr Rcpp rvest sp xml2]; }; + osmose = derive2 { name="osmose"; version="0.1.1"; sha256="0fiijnrvvydhj6j9yb02rn5sg8arcpj3jz977m2zwjgqy878cffg"; depends=[rlist stringr]; }; osmplotr = derive2 { name="osmplotr"; version="0.3.0"; sha256="0w45riwwjigh1bxf9gx0wdj2yhdizwi6ydprp83pss2z9wph66yb"; depends=[curl e1071 ggm ggplot2 httr osmdata rgeos sp spatstat]; }; osrm = derive2 { name="osrm"; version="3.1.0"; sha256="12gbgjp3hq0vg0wf6xq0l9wgq0h6w4l0bfwmlnyhq26z9n08a1lq"; depends=[gepaf jsonlite raster RCurl rgeos sp]; }; otinference = derive2 { name="otinference"; version="0.1.0"; sha256="1l75jjnkyk8yzaw9zyk45jq9ys304i6pzm2xd5apxrb1jk75a3li"; depends=[MASS Rglpk sm transport]; }; @@ -8782,15 +8960,16 @@ in with self; { overlap = derive2 { name="overlap"; version="0.3.0"; sha256="09xa4v0g97rn7xjf6m8fb53h2cna5l1p20b72v0hgrhawvxbjmry"; depends=[]; }; overlapping = derive2 { name="overlapping"; version="1.5.0"; sha256="1xqpkyxpdzcvq7s2hzkbnfddffjfs1xrxhrkvl5i4qv1czdsphjn"; depends=[ggplot2]; }; owmr = derive2 { name="owmr"; version="0.7.2"; sha256="0206i5zzmfjdd43qziis6kqc0zsvn0l7v5sspjrywjxw2gyjfmwb"; depends=[httr jsonlite magrittr]; }; + oxcAAR = derive2 { name="oxcAAR"; version="1.0.0"; sha256="19inf2bcpfj4jzfym1v5f1w5fkmcycz5jrfc2hf0wsvixy53lfxa"; depends=[jsonlite stringr]; }; oz = derive2 { name="oz"; version="1.0-21"; sha256="0p4r8qbpv7q6vad940540pd3lk79pyfj41h2cn22hsy1j0va1qbv"; depends=[]; }; p2distance = derive2 { name="p2distance"; version="1.0.1"; sha256="1ims8i5z5k97kjpdysgx8g7lgvnvf7amahcrssw7bk38bvbxawni"; depends=[]; }; p3state_msm = derive2 { name="p3state.msm"; version="1.3"; sha256="0gbrka62ylxx64r3abpk60y92k2lk5smlf8na68qazph8llsl2rv"; depends=[survival]; }; pAnalysis = derive2 { name="pAnalysis"; version="2.0"; sha256="0pykdlbynzgcbnjs8xs8frgncf53l8qgf6na34adq7da76n570hi"; depends=[coin ggplot2]; }; pBrackets = derive2 { name="pBrackets"; version="1.0"; sha256="0cwv609hzp8anfv3cgfbspz8w0g1ljfz05wm4xfhwy15v32fckrj"; depends=[]; }; pCalibrate = derive2 { name="pCalibrate"; version="0.1-1"; sha256="04a7dmf9sjw44y53i469f8fjm8as2vwr0pgk4s91l63pxdqnjvfl"; depends=[epitools exact2x2 MCMCpack]; }; - pETM = derive2 { name="pETM"; version="0.1.5"; sha256="0a677jbaxhvcjz6846cd1y867srgrmxm78k06xva3hds7hbycm3w"; depends=[Matrix]; }; pGLS = derive2 { name="pGLS"; version="0.0-1"; sha256="1rlk8q09sikf4vpzsx0c7s6qqh2hxf8dy2bgcm4nnkbv2nfjz438"; depends=[MASS]; }; pGMGM = derive2 { name="pGMGM"; version="1.0"; sha256="1hkczz38g8a8253jm8vhm8948fs91g6b2rfzkz47srkkby9ksa4x"; depends=[JGL MASS mvtnorm]; }; + pKSEA = derive2 { name="pKSEA"; version="0.0.1"; sha256="1k9javxbhx28hf5k3i66ggqwlws2w9qwp01g8f7jmyp92pxr3qqd"; depends=[]; }; pMineR = derive2 { name="pMineR"; version="0.31"; sha256="1j71dcldzmk4kzspx4v5s3vqqkllgwkckfm1g145qgg26c1gyc6l"; depends=[cluster DiagrammeR stringr XML]; }; pRF = derive2 { name="pRF"; version="1.2"; sha256="17srabk7mam16rdzc5g9ggdrhjjk8wibny40gxvgzkv7qgq7m80x"; depends=[dplyr ggplot2 multtest permute randomForest reshape2]; }; pROC = derive2 { name="pROC"; version="1.10.0"; sha256="0rm08hf2gxqn5b83ara733w5nihkg1jmdilz67zzrc9iwmqznfa0"; depends=[ggplot2 plyr Rcpp]; }; @@ -8804,7 +8983,7 @@ in with self; { packS4 = derive2 { name="packS4"; version="0.9.3"; sha256="0kkh4lfdbr2ydyfpymwrdkms1d4mj8430p6vxvj5wrgl4vh85gwd"; depends=[codetools]; }; packagedocs = derive2 { name="packagedocs"; version="0.4.0"; sha256="0zw9ana7s42ardphhdaklba02yjj1v8gliq4l98397mjmzc6f4xd"; depends=[crayon devtools digest evaluate highlight htmltools lazyrmd magrittr rmarkdown stringr whisker yaml]; }; packagetrackr = derive2 { name="packagetrackr"; version="0.1.1"; sha256="0xjq27j7bd7lps0vp9gdinxn19wl10k2cp9wb2xjih7p6l0wd57g"; depends=[dplyr httr magrittr rappdirs]; }; - packcircles = derive2 { name="packcircles"; version="0.3.0"; sha256="1v95rr3rz54fsi9br4h95xwh5sf9nb8y8zmj0074bp6h24rss3j5"; depends=[Rcpp]; }; + packcircles = derive2 { name="packcircles"; version="0.3.1"; sha256="0f2y651i96sa7b7mfxg5kinmhhzvcv18lia74fdpdnmc6fxlxg17"; depends=[Rcpp]; }; packrat = derive2 { name="packrat"; version="0.4.8-1"; sha256="1wvjyvb7yy6hq188msqzf8qa00lhll865jp939byc6d4zpscm0x2"; depends=[]; }; pacman = derive2 { name="pacman"; version="0.4.6"; sha256="1vdak1hv3j44dsj6cckzc1a86dg933jqhxdys8fyxacmk101l388"; depends=[devtools]; }; paco = derive2 { name="paco"; version="0.3.2"; sha256="0qf692fqlq0d7hh9yllywaswmj5spy6q1r67nzkhgyh311nhjh6c"; depends=[plyr vegan]; }; @@ -8831,8 +9010,9 @@ in with self; { palettetown = derive2 { name="palettetown"; version="0.1.1"; sha256="1kjj1sqib1ns7895plp8c7h317pxwbyxi2shjkcgadkcsv2yjsxn"; depends=[]; }; palinsol = derive2 { name="palinsol"; version="0.93"; sha256="0k29sl2j7yf4yc0dhb047rxwg9np9l6pdwv6wyb4j80yc07vc9am"; depends=[gsl]; }; palm = derive2 { name="palm"; version="1.1.0"; sha256="05r6hwkvsd30f5frqxh6k2f1p291s78kfh492lvdmcg8jwrnrvll"; depends=[gsl mvtnorm R6 Rcpp spatstat]; }; + palmtree = derive2 { name="palmtree"; version="0.9-0"; sha256="0cd5p82gp2g1zq8kf9ybi4wa1r2jg4dbxbp5n01qs4apmyyncl4d"; depends=[Formula partykit]; }; palr = derive2 { name="palr"; version="0.0.6"; sha256="163c0kcsl0k3fp5q9afv3pb8246j2b3jzmd6g2vcgxb8nhs8wr2f"; depends=[]; }; - pals = derive2 { name="pals"; version="1.4"; sha256="1dbg5rvagmbxa0kbyp1c9sv6w7r8yc6zn6gqpy2yh6j2h1hiblll"; depends=[colorspace dichromat mapproj maps rgl]; }; + pals = derive2 { name="pals"; version="1.5"; sha256="0zc4dw8ipvhdm2qvy71k16vf8fmjs08nqbvvdi1k8h4fs648ddhi"; depends=[colorspace dichromat mapproj maps rgl]; }; pamctdp = derive2 { name="pamctdp"; version="0.3.2"; sha256="0qs8lj5g2fx5rfd0afv76x9x7wqm333qmjv6zzip6pf11dzkghyj"; depends=[ade4 FactoClass xtable]; }; pamm = derive2 { name="pamm"; version="0.9"; sha256="01dv70ca3zif2b2fkx4xjl24x9p9kc63wf0dj5agdjp5qgbkp1p5"; depends=[gmodels lattice lme4 lmerTest mvtnorm]; }; pampe = derive2 { name="pampe"; version="1.1.2"; sha256="092n04nrp886kd163v32f5vhp9r7gnayxzqb6pj57ilm5w1yrcsk"; depends=[leaps]; }; @@ -8842,19 +9022,19 @@ in with self; { pandocfilters = derive2 { name="pandocfilters"; version="0.1-1"; sha256="18n155rkbr3gq5lsb0bh1v1v0z0r6xr2ald3nh7xh3v9qwxpmsz1"; depends=[jsonlite]; }; panelAR = derive2 { name="panelAR"; version="0.1"; sha256="1ka2rbl9gs65xh2y2m4aqwh5qj4szibjy101hqfmza9wmdh25gpq"; depends=[car]; }; panelaggregation = derive2 { name="panelaggregation"; version="0.1.1"; sha256="0x8ldqb9216pclfvs4ymdpian43v2ydkyflpf0k6lcn35r04xfr6"; depends=[data_table]; }; - pangaear = derive2 { name="pangaear"; version="0.3.0"; sha256="1kkjvcwdnak5rxdz5q066b1q7yx75djm5q0gbx6iqcgvvhly1kpp"; depends=[httr jsonlite oai rappdirs tibble xml2]; }; + pangaear = derive2 { name="pangaear"; version="0.6.0"; sha256="0dykacf5ckhck08rbk6l5kyw51i2p1ncy44agcxj79cr290cd5ck"; depends=[crul jsonlite oai png rappdirs tibble xml2]; }; papayar = derive2 { name="papayar"; version="1.0"; sha256="11vkjhazfwfixsr6dba5jrcsr3r3mqgvj5s070b4gp70d6k1z8s5"; depends=[htmltools neurobase oro_nifti servr]; }; papeR = derive2 { name="papeR"; version="1.0-2"; sha256="1pp6zzdqg9lj61f8p90sxl30vp9knmis7154fmfpm6pynbgr46ms"; depends=[car gmodels xtable]; }; paperplanes = derive2 { name="paperplanes"; version="0.0.1.9"; sha256="1d9grc95xqxn91lvk8v7w3z90bhl8savkhihwshyjp8ij2xpzfkl"; depends=[]; }; parSim = derive2 { name="parSim"; version="0.1"; sha256="15d3k91mvbv2hmq0l1jfr0hsv2zkz3cr6axg85kf9bd9q79b85qp"; depends=[dplyr]; }; - parallelDist = derive2 { name="parallelDist"; version="0.2.0"; sha256="133xcfw34j9virkv1y2r2bdrrhl9csxppd870xn2bl28hhrs8d8j"; depends=[Rcpp RcppArmadillo RcppParallel]; }; + parallelDist = derive2 { name="parallelDist"; version="0.2.1"; sha256="1w6c5ijnynqq7q15f5mflmxcad6yblpdaflh378lf9vm2xdq0yjp"; depends=[Rcpp RcppArmadillo RcppParallel]; }; parallelMCMCcombine = derive2 { name="parallelMCMCcombine"; version="1.0"; sha256="05krkd643awqhfrylq9lxr2cmgvnm1msn2x8p1l1483n2gzyklz7"; depends=[mvtnorm]; }; parallelML = derive2 { name="parallelML"; version="1.2"; sha256="05j0rb81i8342m8drwgmgi1w30q96yf501d83cdq4zhjbchphbl1"; depends=[doParallel foreach]; }; parallelMap = derive2 { name="parallelMap"; version="1.3"; sha256="026d018fr2a43cbh8bi2dklzr9fxjzdw5qyq84g2i18v5ibr6bd5"; depends=[BBmisc checkmate]; }; parallelSVM = derive2 { name="parallelSVM"; version="0.1-9"; sha256="0nhxkllpjc3775gpivj8c5a9ssl42zgvswwaw1sdhwg3cxcib99h"; depends=[doParallel e1071 foreach]; }; parallelize_dynamic = derive2 { name="parallelize.dynamic"; version="0.9-1"; sha256="03zypcvk1iwkgy6dmd5bxg3h2bqvjikxrbzw676804zi6y49mhln"; depends=[]; }; paramGUI = derive2 { name="paramGUI"; version="2.1.2"; sha256="054l9hqsvgnwipzqrapkhsk67afz93zv1cligqhjl2wggzn9a8sc"; depends=[colorspace fields shiny shinydashboard TIMP]; }; - paramlink = derive2 { name="paramlink"; version="1.1-1"; sha256="1v2nmigvgc6n33dh2rhn984kxkplc7v5gz72b47zvgxnkcpkrab9"; depends=[assertthat kinship2 maxLik]; }; + paramlink = derive2 { name="paramlink"; version="1.1-2"; sha256="0y6wsrxwyavipmrjjznr2n920w0p6qlwapxc9mnkh9c6w3yznka2"; depends=[assertthat kinship2 maxLik]; }; params = derive2 { name="params"; version="0.6.1"; sha256="0w7k8k7z8p1y2w0dhpfssa868xaikfzfdjw2vlj1yl299k5yisax"; depends=[whisker]; }; paramtest = derive2 { name="paramtest"; version="0.1.0"; sha256="0yn1s1qkgby8x0qn7cy1zhxzc0wyi7bm30pkvijhn5h5afjpylsy"; depends=[boot]; }; paran = derive2 { name="paran"; version="1.5.1"; sha256="0nvgk01z2vypk5bawkd6pp0pnbgb54ljy0p8sc47c8ibk242ljqk"; depends=[MASS]; }; @@ -8867,31 +9047,30 @@ in with self; { parmigene = derive2 { name="parmigene"; version="1.0.2"; sha256="1fsm6pkr17jcbzkj1hbn91jf890fviqk1lq6ls8pihsdgah1zb4d"; depends=[]; }; parsec = derive2 { name="parsec"; version="1.1.2"; sha256="1hf3c23rnxckw4s2vqzbhkjgiir1nv1811saximj0mbih9w2vqpf"; depends=[]; }; parsedate = derive2 { name="parsedate"; version="1.1.3"; sha256="0mg7hbm3903iwvmpn51gjpaaq03rsp72hjb1g8h5g84r81iha002"; depends=[]; }; - parsemsf = derive2 { name="parsemsf"; version="0.1.0"; sha256="0ijnnajcr7zyh0c1k6bz9qa4fkcly1fd44x3qj7mhlx58gnq4sa4"; depends=[dplyr lazyeval RSQLite stringr tidyr]; }; + parsemsf = derive2 { name="parsemsf"; version="0.1.1"; sha256="0ks4503k06ib5lq4ar2rg0sdni99rjcqxj76b0mclasxbi07kjsa"; depends=[DBI dbplyr dplyr lazyeval RSQLite stringr tidyr]; }; partDSA = derive2 { name="partDSA"; version="0.9.14"; sha256="1kp0cdsdjiay349jz22iqfzvspny8s343cfan8xahgf931k9h8p6"; depends=[survival]; }; partialAR = derive2 { name="partialAR"; version="1.0.10"; sha256="18hw0azhvd3737wi5cy8ympwfrj6ag01w1a4csy6kl2kifldg6b7"; depends=[data_table FKF ggplot2 MASS plot3D Rcpp tseries urca zoo]; }; partialCI = derive2 { name="partialCI"; version="1.1.0"; sha256="00gdr25zz327iscasm74bxj0k6h94m59qwaf9vf8xcqfpp0n22wa"; depends=[data_table FKF ggplot2 glmnet MASS partialAR Rcpp TTR zoo]; }; partialOR = derive2 { name="partialOR"; version="0.9"; sha256="02vbvln8lswysaafpxq5rxb6crp7yhlc13i42kybv8fr10jaagjj"; depends=[nnet]; }; - partitionComparison = derive2 { name="partitionComparison"; version="0.2.2"; sha256="1dhwwifq1f4i1qi2sdnhiampbj6bpwc65j3qnbiikzcchs1mb6nd"; depends=[lpSolve Rdpack]; }; + partitionComparison = derive2 { name="partitionComparison"; version="0.2.3"; sha256="1p0f08za30kpmj9ky4jw6i3nl38i7xrslwsj60ih7gvph2jd39ix"; depends=[lpSolve Rdpack]; }; partitionMap = derive2 { name="partitionMap"; version="0.5"; sha256="0pi066xaaq0iqr0d7cncdzjd7bacmgrivc4qvhqx0y7q1vifrdjm"; depends=[randomForest]; }; partitionMetric = derive2 { name="partitionMetric"; version="1.1"; sha256="1wry9d3s814yp79ayab7rzf8z5l2mwpgnrc5j7d2sac24vp4pd48"; depends=[]; }; partitions = derive2 { name="partitions"; version="1.9-19"; sha256="1pklfnjdc094c8nzkqcdvqzdh8v3p5n8jbg4pf9678iw648saiyx"; depends=[gmp polynom]; }; partools = derive2 { name="partools"; version="1.1.6"; sha256="0w7p88y4ab4v14k16k95cyb5f3yl2g6ban11775rmi2h9xqkfxk8"; depends=[data_table pdist regtools]; }; partsm = derive2 { name="partsm"; version="1.1-2"; sha256="0cv3lgkdkn97bc85iwlv9w5pmqwwwsgb717zxnbgb5mzf4xn3f3g"; depends=[]; }; - party = derive2 { name="party"; version="1.2-3"; sha256="1rpp4qfb7igpqlz0jw12ykd7p3ri8miby6nlvyzbblz3h67lplkb"; depends=[coin modeltools mvtnorm sandwich strucchange survival zoo]; }; - partykit = derive2 { name="partykit"; version="1.1-1"; sha256="0cl3ir54pafjhk1cvyzx1a8a244x0qa5lky47m7fx1fdj0k7dx6r"; depends=[Formula survival]; }; + party = derive2 { name="party"; version="1.2-4"; sha256="10i1zxk93c5asinxmi6af1jbw1j4a25d5hzg7viyh73grvlkw7bc"; depends=[coin modeltools mvtnorm sandwich strucchange survival zoo]; }; + partykit = derive2 { name="partykit"; version="1.2-0"; sha256="1zxgx0wrvn4fj2l6pjwmczj7n4232szm1kzfzaq5cn13qzndnk66"; depends=[Formula inum libcoin mvtnorm rpart survival]; }; parviol = derive2 { name="parviol"; version="1.1"; sha256="1sfgic86ssd5wjf9ydss9kjd3m4jmm2d1v896sjsv8bydwymbpx3"; depends=[vioplot]; }; pass = derive2 { name="pass"; version="1.0"; sha256="00dzwg2lnzmrrmzq3fyrs4axswgnsn7f62l2f2a8d8gyf8qzz3nf"; depends=[lars MASS ncvreg]; }; - passport = derive2 { name="passport"; version="0.1.1"; sha256="0mbkiq9qxlflhyii31phva67q89zm7klpj8f2jwhdagjgy48mflx"; depends=[]; }; + passport = derive2 { name="passport"; version="0.2.0"; sha256="1jiwivrz7781zmwxmw13rxl80cr9r5pinnk5bvqz8nhfmlx0zmgd"; depends=[]; }; password = derive2 { name="password"; version="1.0-0"; sha256="1ijzqdw54l8wvpy6ys28njvhplzjxzzi5i9y41vjnrr88n13977v"; depends=[]; }; - pasta = derive2 { name="pasta"; version="0.1.0"; sha256="12ps5bhyk3hllfa9smyw8vxglr45xz9kvhkx2v65pb86iqm0r0kg"; depends=[]; }; pastecs = derive2 { name="pastecs"; version="1.3-18"; sha256="0ixlnc1psgqgm71bsf5z5j65lvr92ghpsk9f1ifm94dzjhi6d22i"; depends=[boot]; }; pastis = derive2 { name="pastis"; version="0.1-2"; sha256="0211pzj3xrmqgxjpspij95kmlpa2klpicw49n6pnz2g1fapjy2bd"; depends=[ape caper]; }; patPRO = derive2 { name="patPRO"; version="1.1.0"; sha256="1l6q6glklmfgivs4gw0v8q4qa57wr2bna477sn2v401hcwmgnfyn"; depends=[ggplot2 gridExtra plyr RColorBrewer reshape2]; }; patchDVI = derive2 { name="patchDVI"; version="1.9.1616"; sha256="1akdlzw8v2p1zz09bm88d63jyxj7fv5h50p459p9ml4yc816xvji"; depends=[]; }; patchPlot = derive2 { name="patchPlot"; version="0.1.5"; sha256="1b4k0dvvj6qwyxbqb36knyrawvy5qq8hl45pz896c9rkqhlg02bx"; depends=[datautils]; }; patchSynctex = derive2 { name="patchSynctex"; version="0.1-4"; sha256="1li3kw7a77sx6dss8pnxzb0p0sdy1kfm1zdnmhhj043zihrryd5p"; depends=[stringr]; }; - patentsview = derive2 { name="patentsview"; version="0.1.0"; sha256="01x1k24xz6315j44jshinp6snxmrfsmnqh61hm5rzb3i10wvwlmi"; depends=[httr jsonlite]; }; + patentsview = derive2 { name="patentsview"; version="0.2.0"; sha256="1n599ksd4vdpfxdlq8bfc0h94v76qbsrrpd5p0q1c6cl083fvvzq"; depends=[httr jsonlite]; }; pathClass = derive2 { name="pathClass"; version="0.9.4"; sha256="1vzmz3bml37wfxsjhkw9fip90sr1iv521ccr7nlf6xd30wavqywk"; depends=[affy Biobase igraph kernlab lpSolve ROCR svmpath]; }; pathdiagram = derive2 { name="pathdiagram"; version="0.1.9"; sha256="1j2h9mmwfi95nwhk9214kcfpb1qrmw249mjaza7i9gijmlicraxz"; depends=[shape]; }; pathmapping = derive2 { name="pathmapping"; version="1.0.2"; sha256="0kx4wxf6lhi58sif8fzr5w4wa0i5253fq4v0ynp721fv1hkvmhvz"; depends=[]; }; @@ -8904,17 +9083,17 @@ in with self; { pavo = derive2 { name="pavo"; version="1.3.1"; sha256="1vr3crp71dibm3jn88wh4gdia2l3z4aqmfns7v5pllqadk9s1064"; depends=[geometry mapproj pbmcapply rcdd]; }; pawacc = derive2 { name="pawacc"; version="1.2.2"; sha256="0d5k0bq8zmb7sjvba3ljp97mba2iycnw44rnsnn2aajs02l1c2xg"; depends=[SparseM]; }; pawls = derive2 { name="pawls"; version="1.0.0"; sha256="01sf1cmd216ca5iwmw4hfnxi9lvh16r441cfcaa3n77zhq0i4w7n"; depends=[]; }; - pbapply = derive2 { name="pbapply"; version="1.3-3"; sha256="0iqhymf65jffh00qf056h1p76xf92bfmij6aymlmgnvn24fv4ybk"; depends=[]; }; + pbapply = derive2 { name="pbapply"; version="1.3-4"; sha256="0lk5kxac09xzdv6vf7ix6r5bfrm7cnpyr2l5mkd4igpciadszzfd"; depends=[]; }; pbatR = derive2 { name="pbatR"; version="2.2-9"; sha256="1p8rj0lzm4pp1svgy7xia2sclkngzfjbgbikq94s6v92d582wncw"; depends=[rootSolve survival]; }; - pbdBASE = derive2 { name="pbdBASE"; version="0.4-5"; sha256="0i7rav197787snhw2l5pyb2x0i9d1gl9d7lks2bk0dcxr0ndy9gm"; depends=[pbdMPI pbdSLAP]; }; + pbdBASE = derive2 { name="pbdBASE"; version="0.4-5.1"; sha256="0ghdq8ry6fiq8qj3plq2n8isjx6iacnhqd1z73bjckmvp99g221n"; depends=[pbdMPI pbdSLAP]; }; pbdDEMO = derive2 { name="pbdDEMO"; version="0.3-1"; sha256="0vr3dvvhr8j6xvdf308nn37y0lkl2ysm93yf0h7rclvqvsk1pf66"; depends=[pbdBASE pbdDMAT pbdMPI]; }; pbdDMAT = derive2 { name="pbdDMAT"; version="0.4-2"; sha256="1xiwfpi8r0l8jlfrc35aknm09y4qbn0hvvkscdpcxv9q7zifvl3v"; depends=[pbdBASE pbdMPI]; }; - pbdMPI = derive2 { name="pbdMPI"; version="0.3-3"; sha256="0bgnx2d7ykfzq85jkiggwakqz2ngmvf7d4lx8qp95w272bkpm779"; depends=[rlecuyer]; }; + pbdMPI = derive2 { name="pbdMPI"; version="0.3-4"; sha256="05b0f8hqnn5wrmxg1yjd60h5v0hys7bvzb9brgbsxp1nbsashqq9"; depends=[rlecuyer]; }; pbdNCDF4 = derive2 { name="pbdNCDF4"; version="0.1-4"; sha256="0fd29mnbns30ck09kkh53dgj24ddrqzks4xrrk2hh1wiy7ap1h95"; depends=[]; }; pbdPROF = derive2 { name="pbdPROF"; version="0.3-1"; sha256="0a7c31605si062vbwcwngv770axlwyhh00cvdfqw3hv421p61sj8"; depends=[]; }; - pbdRPC = derive2 { name="pbdRPC"; version="0.1-1"; sha256="0ddn6ba9nvrh90jii2z9jx4graqaa985ja2q4h3q5q2d6dpm7j7r"; depends=[]; }; - pbdSLAP = derive2 { name="pbdSLAP"; version="0.2-2"; sha256="0d7hj1rq4vmp9i4v7d3pjivqpw0pv06xjl4wlnjj42jfxdg70yvh"; depends=[pbdMPI rlecuyer]; }; - pbdZMQ = derive2 { name="pbdZMQ"; version="0.2-6"; sha256="1kqpl8y55a9m2qkh56wb9qgxxwckwwjabj2m519nvwv55avkgy61"; depends=[R6]; }; + pbdRPC = derive2 { name="pbdRPC"; version="0.2-0"; sha256="0qndlgv6r9k17mz75g7d2k5alg0qp5h7scpnz2zl6kqlpr8z6l2p"; depends=[]; }; + pbdSLAP = derive2 { name="pbdSLAP"; version="0.2-3"; sha256="1famaxkm385ka7kgk997lvkb68cpch0vb26l94vzkhxwfxl0fyjp"; depends=[pbdMPI rlecuyer]; }; + pbdZMQ = derive2 { name="pbdZMQ"; version="0.3-2"; sha256="0dzwwffinn9bbb73dmmh88c374f9057bl0a8dq97fbv63j4a5qpc"; depends=[]; }; pbivnorm = derive2 { name="pbivnorm"; version="0.6.0"; sha256="05jzrjqxzbcf6z245hlk7sjxiszv9paadaaimvcx5y5qgi87vhq7"; depends=[]; }; pbkrtest = derive2 { name="pbkrtest"; version="0.4-7"; sha256="1si3bhi59xc51a0pgjjglccq3h4aljyhw2k1b8574s145fnh7fsw"; depends=[lme4 MASS Matrix]; }; pbmcapply = derive2 { name="pbmcapply"; version="1.2.4"; sha256="0wh0ljy9nbb7ifh06bf79hwc2ci9482hdppgpa1zpz8x2mgyvy04"; depends=[future]; }; @@ -8925,12 +9104,13 @@ in with self; { pcaBootPlot = derive2 { name="pcaBootPlot"; version="0.2.0"; sha256="1320d969znk9xvm1ylhc3a31nynhzyjpbg1fsryq72nhf8jxijaa"; depends=[FactoMineR RColorBrewer]; }; pcaL1 = derive2 { name="pcaL1"; version="1.5.2"; sha256="1f7481wn2c935llb9visfdlv958ixxqybp5r2dy7nm18jacf2a0l"; depends=[]; }; pcaPA = derive2 { name="pcaPA"; version="2.0.2"; sha256="14hi09qksr1z54l268yv4g2x5hlikir7zir4ccd9yi5z1918ksj5"; depends=[ggplot2 ltm mc2d polycor sfsmisc]; }; - pcaPP = derive2 { name="pcaPP"; version="1.9-72"; sha256="0i2822bv86dpqmk3q17x61nsp3gjjnn4nr8191rwvbiib7xhpgaq"; depends=[mvtnorm]; }; + pcaPP = derive2 { name="pcaPP"; version="1.9-73"; sha256="1z2kdf9gfp965xbcd4rg6vf20d1bl443na0qjkpq7gmzpaq6cifa"; depends=[mvtnorm]; }; pcadapt = derive2 { name="pcadapt"; version="3.0.4"; sha256="031ql3xppjkqrm17bvccj61hyf38skjb4qv6rs0l1h2ib8jql8ka"; depends=[ggplot2 MASS robust vcfR]; }; pcalg = derive2 { name="pcalg"; version="2.5-0"; sha256="002y7b0r750nbnrg8w53q2fyvk13jk4jrqlf3f2777qw7si5vmz3"; depends=[abind bdsmatrix BH clue corpcor dagitty fastICA ggm gmp graph igraph RBGL Rcpp RcppArmadillo robustbase sfsmisc vcd]; }; + pccc = derive2 { name="pccc"; version="1.0.0"; sha256="1z9vr6r5mnk73gk5p4qk7mnmn065b55kbsgr414nrkii0in6g0sp"; depends=[dplyr Rcpp]; }; pcdpca = derive2 { name="pcdpca"; version="0.4"; sha256="0ys4hrin0w3f87d1d986wvrfkfwapzj9hz7d7v92r60ns74g7r5m"; depends=[fda freqdom]; }; pcensmix = derive2 { name="pcensmix"; version="1.2-1"; sha256="1yrz4hdj52in8z65qyl18kh7frv75rb8ss5ljv3vbm6yhxi32jnd"; depends=[]; }; - pcev = derive2 { name="pcev"; version="2.2.1"; sha256="0n8gjfgxbmapakkcpklj2kzyhx4gf914hqv2hrvbvvz0f6f6vv4c"; depends=[corpcor RMTstat]; }; + pcev = derive2 { name="pcev"; version="2.2.2"; sha256="1l0afcdzkxzkhkc8ln2fzi50hc7nfq46lg6hhx6rrzkb41w82iqw"; depends=[corpcor RMTstat]; }; pcg = derive2 { name="pcg"; version="1.1"; sha256="194j72hcp7ywq1q3dd493pwkn1fmdg647gmhxcd1jm6xgijhvv87"; depends=[]; }; pch = derive2 { name="pch"; version="1.3"; sha256="13pfrvp539fz4hxp08yil93caw3cjdna7xnky5fqd0lhc84fwq76"; depends=[survival]; }; pcnetmeta = derive2 { name="pcnetmeta"; version="2.6"; sha256="0rpd1bgg932xhj03fnskhbg7ni9nfd8qrvxvix8qmbgw8bwdsbgd"; depends=[coda rjags]; }; @@ -8940,7 +9120,7 @@ in with self; { pcrsim = derive2 { name="pcrsim"; version="1.0.2"; sha256="04177xl513k01prmf93kha91dyxmb9v80d1y4lz73fxsifj6bhar"; depends=[data_table ggplot2 gWidgets mc2d plyr strvalidator]; }; pcse = derive2 { name="pcse"; version="1.9"; sha256="04vprsvcmv1ivxqrrvd1f8ifg493byncqvmr84fmc0jw5m9jrk3j"; depends=[]; }; pdR = derive2 { name="pdR"; version="1.5"; sha256="072ra8czfvgcgkbdfkjhbpk7f23zh717f9sh84vls9j0wyrai6hn"; depends=[boot car coefplot lmtest papeR plm sandwich]; }; - pdSpecEst = derive2 { name="pdSpecEst"; version="1.1.1"; sha256="1984gxyp9y8hnc3cqdr51bk2l85qpqrkrlslw38q2dmsq40v26rz"; depends=[astsa ddalpha multitaper Rcpp RcppArmadillo]; }; + pdSpecEst = derive2 { name="pdSpecEst"; version="1.2.1"; sha256="0j68jmsm6c9pan195k0l0nm1ldbipl5ywlbwkz61dblspizh04iw"; depends=[ddalpha multitaper Rcpp RcppArmadillo]; }; pdc = derive2 { name="pdc"; version="1.0.3"; sha256="0503n7aiy0qrl790yfjvpm7bbyz1i4818rlg96q0fvzb58zqmyvc"; depends=[]; }; pder = derive2 { name="pder"; version="1.0-0"; sha256="097klk334bjhlss8x73f27l7jcp7d7vh10jr5sazm5kcvi95619i"; depends=[]; }; pdfCluster = derive2 { name="pdfCluster"; version="1.0-2"; sha256="0kbci54dlzn736835fh18xnf2pmzqrdmwa3jim29xcnwa1r2gklb"; depends=[geometry]; }; @@ -8949,7 +9129,7 @@ in with self; { pdftables = derive2 { name="pdftables"; version="0.1"; sha256="1gnwjijr89cczchc7yi4w5xiw0dalbymvj23rymm8cfra34iwn5p"; depends=[httr]; }; pdftools = derive2 { name="pdftools"; version="1.5"; sha256="09z4174zbp0nzdkpwx5yxxlmzskqg48gc6n5qpmx0hkanfz8g7ls"; depends=[Rcpp]; }; pdist = derive2 { name="pdist"; version="1.2"; sha256="18nd3mgad11f2zmwcp0w3sxlch4a9y6wp8dfdyzvjn7y4b4bq0dd"; depends=[]; }; - pdmod = derive2 { name="pdmod"; version="1.0"; sha256="1czpaghp2lcad4j6wxswdfw0n9m0phngy966zr4fr3ciqpx3q129"; depends=[mco]; }; + pdmod = derive2 { name="pdmod"; version="1.0.1"; sha256="04bk9gjg2c55hk6k1hy0m29927s8a5ig6mr4xb89npam68g0pcms"; depends=[mco]; }; pdolsms = derive2 { name="pdolsms"; version="0.2"; sha256="18gwr1xnm7jbqna911b7haa9sv1i2qvq18w00dkbnj796rh0h78f"; depends=[reshape2]; }; pdp = derive2 { name="pdp"; version="0.6.0"; sha256="12x9j3lwnss45wlafd5kc4nw293vhffijmgyafahqwz9if829m10"; depends=[ggplot2 gridExtra lattice magrittr mgcv plyr viridis]; }; peacots = derive2 { name="peacots"; version="1.3"; sha256="128qpz06b0giz80lp9yq9l6pxcjglfr97yickg7z64vzzl2jilmq"; depends=[]; }; @@ -8971,7 +9151,7 @@ in with self; { penalized = derive2 { name="penalized"; version="0.9-50"; sha256="0q60pgmx2wbnc7i1zf1i0sxn1zy257hl73ii0abx83zpcywq9vb6"; depends=[Rcpp RcppArmadillo survival]; }; penalizedLDA = derive2 { name="penalizedLDA"; version="1.1"; sha256="1bw5wiixmmg1vr3v0d59vh67f0gy2rvr30bi58skvrkb25qcjq6l"; depends=[flsa]; }; penalizedSVM = derive2 { name="penalizedSVM"; version="1.1"; sha256="0zc36cgcrdy4rwhg4hhhahymqfalvc5v2zmqq56ikz5blln82qvq"; depends=[corpcor e1071 lhs MASS mlegp statmod tgp]; }; - penaltyLearning = derive2 { name="penaltyLearning"; version="2017.07.11"; sha256="0ab1dy0kh3fmbcdg29qhvrjnaxpk7lqcnsz4bwplq0ia3assc8sl"; depends=[data_table geometry ggplot2]; }; + penaltyLearning = derive2 { name="penaltyLearning"; version="2017.12.08"; sha256="0pkd853dq7frp0f9aii99qpnx9mk4gzb73iykfa5q9bnp45z8qd0"; depends=[data_table geometry ggplot2]; }; pencopula = derive2 { name="pencopula"; version="0.3.5"; sha256="1cy36pprbrfabk9n3x4d1xbj1vd2dda7xq3ihj2hzniwn77j63wi"; depends=[fda lattice latticeExtra quadprog]; }; pencopulaCond = derive2 { name="pencopulaCond"; version="0.2"; sha256="18hjjxnd0l2ms20ddqkghfbd4as5kq2rgwqzpz4y38k6nw76x511"; depends=[doParallel fda foreach igraph lattice latticeExtra pacotest quadprog TSP]; }; pendensity = derive2 { name="pendensity"; version="0.2.10"; sha256="023gl993jniv5r8l9nkaha7v6k2rb1hxm7z543dpr4186kjbi7zl"; depends=[fda lattice]; }; @@ -8991,25 +9171,26 @@ in with self; { permGS = derive2 { name="permGS"; version="0.2.5"; sha256="0d2kp3c1fmnjjmsvc2qwh6m66yqvy2vrrxgv1fj2i4clsbavfa0y"; depends=[coin survival]; }; permPATH = derive2 { name="permPATH"; version="1.1"; sha256="06h1lqpmkg4ajjh4r837qp094h105n4mpvafnp2nsbv9yyayd4h8"; depends=[R2HTML xtable]; }; permubiome = derive2 { name="permubiome"; version="1.1"; sha256="02fg1g96pg6a87n8mhrls54xp0vnqqsgg39nnjirxr7hd74l71x9"; depends=[ggplot2]; }; + permuco = derive2 { name="permuco"; version="1.0.1"; sha256="19spn5ra41v7s4ixdg5pbksfi8linhvhvfmllz72iw6wbzsw8m0m"; depends=[MASS Matrix permute]; }; permutations = derive2 { name="permutations"; version="1.0-2"; sha256="04lak21x0z1cskgm5w4xdyq59kmyrz64bwfpf332vfka54aiv8lk"; depends=[magic numbers partitions]; }; permute = derive2 { name="permute"; version="0.9-4"; sha256="1w8wzk1fg9q7wvisnfp2js70dg0m9wi12gkdhpyngpbdcgssahd5"; depends=[]; }; perry = derive2 { name="perry"; version="0.2.0"; sha256="1lfmcq2xsxmfs7cxvhgxcsggslgjicbaks4wcjw1yjh67n559j46"; depends=[ggplot2 robustbase]; }; persiandictionary = derive2 { name="persiandictionary"; version="1.0"; sha256="0rgi36ngpiax3p5zk4cdgf3463vgx7zg5wxscs2j7834yh37jwax"; depends=[]; }; - personalized = derive2 { name="personalized"; version="0.1.2"; sha256="189hqji0bjknkj64x23888ybl0ckyw3xk59mkw60r3m25ssajbm6"; depends=[foreach gbm ggplot2 glmnet kernlab mgcv plotly survival]; }; + personalized = derive2 { name="personalized"; version="0.1.3"; sha256="0xi13mcwr9h0fxb4ihfvjp7xvakskfvlcbbcfk4bvxfwp6yv7vv7"; depends=[foreach gbm ggplot2 glmnet kernlab mgcv plotly survival]; }; personograph = derive2 { name="personograph"; version="0.1.3"; sha256="07lrlbw4222l1d5rwn0hfqliyk8sqjf6ipz4n2zwcbk113bb8sy7"; depends=[grImport]; }; perspectev = derive2 { name="perspectev"; version="1.1"; sha256="175s1nq5z4gfs5qb39lq230g6n0v8fxzs5hr9j2rgx0knpbjfq03"; depends=[ape boot doParallel foreach ggplot2 mapproj sp]; }; perturb = derive2 { name="perturb"; version="2.05"; sha256="18ydmmp8aq4rf9834dmsr4fr9r07zyn97v8a1jqz3g9njza983la"; depends=[]; }; + perturbR = derive2 { name="perturbR"; version="0.1.0"; sha256="0zn10xm39sbv9g8mvp582c6bwpdk6ss1b50pdk7nkdmih3g6cxqb"; depends=[dils ggplot2 igraph mcclust]; }; pesticides = derive2 { name="pesticides"; version="0.1"; sha256="1w180hqqav0mh9sr9djj94sf55fzh4r373a7h08a2nz9nyjpq09w"; depends=[]; }; petrinetR = derive2 { name="petrinetR"; version="0.1.0"; sha256="0na8srzwi933bva9j3hrn4ji8s58dm28jpxw9q13mpahzch4r454"; depends=[dplyr visNetwork]; }; - petro_One = derive2 { name="petro.One"; version="0.1.1"; sha256="0x2zdjb3bb8k3cnkxrq5kikcik1ibiiizss8fkd48w9kw8wia688"; depends=[cluster dplyr ggplot2 graph magrittr RColorBrewer Rgraphviz rvest RWeka tibble tm urltools wordcloud xml2]; }; + petro_One = derive2 { name="petro.One"; version="0.1.3"; sha256="13bxd011lprimy5m3z08l4yng2fkp28b1ad1bqs0piffx5bxw13n"; depends=[cluster data_table dplyr ggplot2 graph magrittr RColorBrewer Rgraphviz rvest RWeka tibble tm urltools wordcloud xml2]; }; pewdata = derive2 { name="pewdata"; version="0.2.0"; sha256="17j8fdn9x6hannr91zyccya523z3zm03gr517xfcyrd0m486xnqb"; depends=[httr magrittr purrr rvest]; }; pez = derive2 { name="pez"; version="1.1-1"; sha256="14n9s604wwh07kjir5kw6sra6bbmnpg00h3zvli3zqd8lx892hm8"; depends=[ade4 ape apTreeshape caper FD Matrix mvtnorm picante quantreg vegan]; }; pfa = derive2 { name="pfa"; version="1.1"; sha256="0ikdd7ps8wnjp9nm66w447m06hqxnnk553jglxikl2w5d9vk6b31"; depends=[lars POET quantreg]; }; - pgam = derive2 { name="pgam"; version="0.4.12"; sha256="0vhac2mysd053bswy3xwpiz0q0qh260hziw6bygpf83vkj94qf2v"; depends=[]; }; + pgam = derive2 { name="pgam"; version="0.4.15"; sha256="12llflsb32dfvxl3nbyb9bsl9bmd35g5g163hd3axzmg1bgi21ls"; depends=[]; }; pgee_mixed = derive2 { name="pgee.mixed"; version="0.1.0"; sha256="115vvpv54q80486i3xs2yhmfyx476cf4g1v43q6l7wj3jwzcrvbg"; depends=[copula mvtnorm Rcpp RcppArmadillo]; }; pgirmess = derive2 { name="pgirmess"; version="1.6.7"; sha256="1an7isajb4h04i2sfnssnxfi61v17fh803ddf8hmcfqkpig4yi6p"; depends=[boot maptools rgdal rgeos sp spdep splancs]; }; pglm = derive2 { name="pglm"; version="0.2-1"; sha256="14hnlidf62kzcf83jc7k17n4hjjaj82scdwh8a7qxd056vygkqx2"; depends=[maxLik plm statmod]; }; - pgmm = derive2 { name="pgmm"; version="1.2"; sha256="0f0wdcirjyxzg2139c055i035qzmhm01yvf97nrhp69h4hpynb2n"; depends=[]; }; pgnorm = derive2 { name="pgnorm"; version="2.0"; sha256="1k9z7pvmranr8m62v7amc0pj6lwzh3wqi79gg3mflifn1mr6c057"; depends=[]; }; pgraph = derive2 { name="pgraph"; version="0.8"; sha256="1r784snci5m81qljfh1r3w8qzszmy0476zvsd1alh43afzg9zpr5"; depends=[energy glasso glmnet SAM]; }; pgs = derive2 { name="pgs"; version="0.4-0"; sha256="1zf5sjn662sds3h06zk5p4g71qnpwp5yhw1dkjzs1rs48pxmagrx"; depends=[gsl R2Cuba]; }; @@ -9017,7 +9198,7 @@ in with self; { ph2bye = derive2 { name="ph2bye"; version="0.1.4"; sha256="0h5d8d4bagkp6g0nb67cb225ki5p1amnclnfj6afgdcsli5clr67"; depends=[animation nleqslv Rcpp VGAM]; }; ph2mult = derive2 { name="ph2mult"; version="0.1.1"; sha256="0w3w18fkr9xzv6mpb00cz5id33zgsnl6s8zgjpchzvrhmpjpp437"; depends=[clinfun]; }; phalen = derive2 { name="phalen"; version="1.0"; sha256="0awj9a48dy0azkhqkkzf82q75hrsb2yw6dgbsvlsb0a71g4wyhlr"; depends=[sqldf]; }; - phangorn = derive2 { name="phangorn"; version="2.3.1"; sha256="1sv3g2yhbmgkcffizhyzjhkymjih1jq72g1as1asdw65nbsk332i"; depends=[ape fastmatch igraph magrittr Matrix quadprog Rcpp]; }; + phangorn = derive2 { name="phangorn"; version="2.4.0"; sha256="0xc8k552nxczy19jr0xjjagrzc8x6lafasgk2c099ls8bc1yml1i"; depends=[ape fastmatch igraph magrittr Matrix quadprog Rcpp]; }; phantom = derive2 { name="phantom"; version="0.1.2"; sha256="15b770awvzjp8x44psifngnvsn2fs8s43v2lxj336r6k2iswpc9x"; depends=[gplots MASS NMF RColorBrewer Rcpp RcppArmadillo]; }; phase1RMD = derive2 { name="phase1RMD"; version="1.0.8"; sha256="1wvlajsqb8y8f30asq1lyk87kmakh2risnky98g5gday765y90qa"; depends=[arrayhelpers boot coda ggplot2 mvtnorm rjags]; }; phaseR = derive2 { name="phaseR"; version="1.3"; sha256="1hwclb7lys00vc260y3z9428b5dgm7zq474i8yg0w07rxqriaq2h"; depends=[deSolve]; }; @@ -9027,20 +9208,22 @@ in with self; { phenex = derive2 { name="phenex"; version="1.4-5"; sha256="00lsymflbmlxzxz8rxcpc94pc9zmhybial9f2xkz98h6h45zgrjl"; depends=[DEoptim foreach]; }; phenmod = derive2 { name="phenmod"; version="1.2-3"; sha256="0dxwx8c7zka29fq7svrvn8bghj8jh8grbrgsw4pvavx2439cldak"; depends=[gstat lattice pheno RColorBrewer]; }; pheno = derive2 { name="pheno"; version="1.6"; sha256="0xdya1g1ap7h12c6zn3apbkxr725rjhcp4gbdchkvcnwz4y9vw8c"; depends=[nlme quantreg SparseM]; }; - pheno2geno = derive2 { name="pheno2geno"; version="1.3.1"; sha256="1k1hw5qxrwxy502zkcfcz0nxjqmvdk1fgghjc512vq7x5znblz3v"; depends=[mixtools qtl VGAM]; }; + pheno2geno = derive2 { name="pheno2geno"; version="1.4.0"; sha256="0fy8z6x1y0sakp07jb6zs0w0f86pbbllicj4qylxzfd5rpn1rqr0"; depends=[mixtools qtl VGAM]; }; + phenoCDM = derive2 { name="phenoCDM"; version="0.0.2"; sha256="07fmljdn5dg9v2mv0k7hjk7xlldhvzvcxia8vda0xkpn3hlrriid"; depends=[rjags]; }; phenology = derive2 { name="phenology"; version="6.0.3"; sha256="17idd9znwmgsa6wzijc4ahvlld4qp6sihyg3cdv91gfl0yjd51w1"; depends=[HelpersMG lmf numDeriv optimx]; }; phenomap = derive2 { name="phenomap"; version="1.0.1"; sha256="1v25aga9lnph3z8pn887a5phl720a3mpk96bmxvjy89633rvjxk4"; depends=[dplyr phenex plyr raster rgdal stringr]; }; phenopix = derive2 { name="phenopix"; version="2.3.1"; sha256="1yy163nh2b74m0v7f2gkgxaplvw4whs2h30bkw4chl0zyrcrci86"; depends=[bcp doParallel foreach gtools iterators jpeg plyr raster SDMTools sp stringr strucchange zoo]; }; phia = derive2 { name="phia"; version="0.2-1"; sha256="0rv2akl5a488vax4sd9wnx765mch4vvcmg3iyxyljzl5kpqh5r00"; depends=[car Matrix]; }; philentropy = derive2 { name="philentropy"; version="0.0.3"; sha256="00fpbmxg8m8apjb6cdrhh9rw3vp1j65ccvsqj1xlfcn1x5l1h3h8"; depends=[dplyr KernSmooth Rcpp]; }; - phmm = derive2 { name="phmm"; version="0.7-5"; sha256="0dil0ha199yh85j1skwfdl0v02vxdmb0xcc1jdbayjr5jrn9m1zk"; depends=[lattice Matrix survival]; }; + phmm = derive2 { name="phmm"; version="0.7-10"; sha256="1ra5qf24qmwjf8cra9yh20i2s8jv0kzb1gyw96il8r5cdl20gbcz"; depends=[lattice Matrix survival]; }; phonR = derive2 { name="phonR"; version="1.0-7"; sha256="0al2cbynnbvmd90lk1w1g1ppslqq0ng8vbb6bl7m4kqwd2lgv056"; depends=[deldir plotrix splancs]; }; phonTools = derive2 { name="phonTools"; version="0.2-2.1"; sha256="01i481mhswsys3gpasw9gn6nxkfmi7bz46g5c84m13pg0cv8hxc7"; depends=[]; }; phonenumber = derive2 { name="phonenumber"; version="0.2.2"; sha256="1m5idp538lvynmfp8m7l89js6hk5lpp26k419bdvj3hd3ap0n9lg"; depends=[]; }; - phonics = derive2 { name="phonics"; version="0.7.5"; sha256="0llwn0ws5g0ri6bywj5jkx67954xil8w666nhy9jwnx0jzpa0cf2"; depends=[BH Rcpp]; }; - photobiology = derive2 { name="photobiology"; version="0.9.17"; sha256="02xk0vpcfmwsr8h2yjgp5lh6rlzv26yz14r78z686g02hpzcf0d8"; depends=[caTools dplyr lubridate plyr polynom rlang splus2R tibble]; }; + phonics = derive2 { name="phonics"; version="1.0.0"; sha256="02bkw589iijlzbw0cbg9qhq99jij2p92cqrxa77chkly4naqkqds"; depends=[BH Rcpp]; }; + photobiology = derive2 { name="photobiology"; version="0.9.18-1"; sha256="0sn6avmic8vad6xs84hbw4scmrififn398gz0qmnbgbld3qqbxjq"; depends=[caTools dplyr lubridate plyr polynom rlang splus2R tibble]; }; + photobiologyFilters = derive2 { name="photobiologyFilters"; version="0.4.4"; sha256="14aiw5jxd6wnngy1rbbm85l0yx64nxrancal017wvr5n867c32d6"; depends=[photobiology]; }; photobiologyInOut = derive2 { name="photobiologyInOut"; version="0.4.13"; sha256="1zagvdaiv8d5frwki20wwvbyw4a9in3k8560janbmd161xh13ii0"; depends=[colorSpec dplyr hyperSpec lazyeval lubridate pavo photobiology readr readxl reshape2 tibble]; }; - photobiologyLEDs = derive2 { name="photobiologyLEDs"; version="0.4.2"; sha256="0m8bwpvr3g0xdcpjg0pm5qp7b941y85gdzw24vc1nhfmzwd0lxn0"; depends=[photobiology]; }; + photobiologyLEDs = derive2 { name="photobiologyLEDs"; version="0.4.3-1"; sha256="0inhl6ba1fzkak4752m60hkm6fzapzyz5kchvz18yv33dmm13v1c"; depends=[photobiology]; }; photobiologyLamps = derive2 { name="photobiologyLamps"; version="0.4.1"; sha256="19pzb12qisv5hy7rps0dp9bq8zanpyr2yn41i6rd8hk80fknjha6"; depends=[photobiology]; }; photobiologyPlants = derive2 { name="photobiologyPlants"; version="0.4.1"; sha256="0mpb5sv4wkvqzbhf193zkhap44yzlhxrnjx1p3j9iyjdg4bb1kka"; depends=[photobiology photobiologyWavebands]; }; photobiologyWavebands = derive2 { name="photobiologyWavebands"; version="0.4.2"; sha256="0l1784xi9hzsxmiqipv0zkb4lq1xd9f890rzsgsjb0km6js5x3q7"; depends=[photobiology]; }; @@ -9048,8 +9231,9 @@ in with self; { phreeqc = derive2 { name="phreeqc"; version="3.3.10"; sha256="0hcdjj1wgfknqf5yx50b9vz5f72siw4dslyvk2xbrfnwbzzz4qib"; depends=[]; }; phtt = derive2 { name="phtt"; version="3.1.2"; sha256="1fvvx5jilq5dlgh3qlfsjxr8jizy4k34a1g3lknfkmvn713ycp7v"; depends=[pspline]; }; phuassess = derive2 { name="phuassess"; version="1.1"; sha256="0jplj9gih32dllx2hw5aqvc9b94sbrbv66s3a5r8mdbpjh93rhng"; depends=[]; }; + phuse = derive2 { name="phuse"; version="0.1.5"; sha256="0cl36yxxhadg5rwdz3pxzqly52bv5510rr5ijyzb0x24l7zx6pjk"; depends=[git2r RCurl rlist shiny yaml]; }; phybreak = derive2 { name="phybreak"; version="0.2.0"; sha256="0vapc0w308wv1cd72p2xbj3q7jfnxwp08g5g8855a38pcn3njbfg"; depends=[ape phangorn Rcpp stringr]; }; - phyclust = derive2 { name="phyclust"; version="0.1-21"; sha256="14zv9m47af4fvl8fiadzmj01b2498jqchy3xc2aqvicz7friqzyi"; depends=[ape]; }; + phyclust = derive2 { name="phyclust"; version="0.1-22"; sha256="0c3w1vafhcshnh5lkb6bykk6w7w91qigz3sf215zqmrra1acri0d"; depends=[ape]; }; phyext2 = derive2 { name="phyext2"; version="0.0.4"; sha256="0j871kgqm9fll0vdgh071z77ib51y8pxxm0ssjszljvvpx1mb8rb"; depends=[ape phylobase]; }; phylin = derive2 { name="phylin"; version="1.1.1"; sha256="1hxmh5jgcz41bhmi8kvimw0b6m4p3yq85bh79hl7xbx2kshxmvzq"; depends=[]; }; phyloTop = derive2 { name="phyloTop"; version="2.1.0"; sha256="1a6r4fd2zv5napvdj2lqljccwsnd5mjkd1wzl18hvx7qzxvrna8c"; depends=[ape igraph NHPoisson phylobase]; }; @@ -9062,38 +9246,37 @@ in with self; { phylolm = derive2 { name="phylolm"; version="2.5"; sha256="0bffqzba6kcv8jyya7pja10mjnklhihczljhmj8q0pdrmd6qgqp8"; depends=[ape]; }; phylometrics = derive2 { name="phylometrics"; version="0.0.1"; sha256="1pmr6l3wmaf91wdlsc5m63l07fibngnly2qzkma0rdi463ii03il"; depends=[mvtnorm]; }; phylopath = derive2 { name="phylopath"; version="1.0.0"; sha256="1n6f7piygps3pwqapsvqpz764995kxhdqz1hc5n6znvl01ykdqx5"; depends=[ape dplyr ggm ggplot2 ggraph igraph MuMIn pbapply phylolm purrr tibble tidyr]; }; - phylosignal = derive2 { name="phylosignal"; version="1.1"; sha256="039sdb5cyijsrvj13xznr0j7vcp780lif62xk5x5hpzxvpg1wwgk"; depends=[adephylo ape boot igraph phylobase Rcpp RcppArmadillo RCurl]; }; + phylosignal = derive2 { name="phylosignal"; version="1.2"; sha256="0apsg4v1n58wn8y8wnl6x1ahl903i29hh8bs2dw6ky2jafkjj4jb"; depends=[adephylo ape boot DBI igraph phylobase Rcpp RcppArmadillo]; }; phylosim = derive2 { name="phylosim"; version="3.0.2"; sha256="148zm43cgdhr264ffcabjx4abykks07jix6lypqysqy25fbmdngk"; depends=[ape compoisson ggplot2 R_methodsS3 R_oo]; }; - phylotate = derive2 { name="phylotate"; version="1.1"; sha256="1lj7v05iblac2y9xggzbdm6hy99jzf60src5h3dwx3s8lm3490qm"; depends=[]; }; - phylotools = derive2 { name="phylotools"; version="0.1.2"; sha256="19w7xzk6sk1g9br7vwv338nvszzh0lk5rdzf0khiywka31bbsjyb"; depends=[ape fields picante seqRFLP spaa]; }; + phylotate = derive2 { name="phylotate"; version="1.2"; sha256="19nssrdax5w5a50159j39jgs7305s48k3h56ivyzs5di6l7x1yxj"; depends=[]; }; + phylotools = derive2 { name="phylotools"; version="0.2.2"; sha256="1dhk1ncp5zi4zl1xfnjz64v983dm7bq7iimfjin80j0bdcpps44w"; depends=[ape]; }; phyndr = derive2 { name="phyndr"; version="0.1.0"; sha256="03y3j4ik6flrksqm2dwh2cihn12hzfdik0fsak4zbxjdzaqn5gim"; depends=[ape]; }; phyreg = derive2 { name="phyreg"; version="0.7"; sha256="0saynhq4yvd4x2xaljcsfmqk7da2jq3jqk26fm9qivg900z4kf35"; depends=[]; }; physiology = derive2 { name="physiology"; version="0.2.2"; sha256="0z394smbnmlrnp9ms5vjczc3avrcn5nxm8np5y58k86x470w6npz"; depends=[]; }; phytools = derive2 { name="phytools"; version="0.6-44"; sha256="1y815pv1cksj244vcb7q4qr45gzr4cb1qwi166h65ryggywcj48w"; depends=[animation ape clusterGeneration coda combinat maps MASS mnormt msm nlme numDeriv phangorn plotrix scatterplot3d]; }; phytotools = derive2 { name="phytotools"; version="1.0"; sha256="049znviv2vvzv23biy1l28axm7bc7biwmq4bnn0cnjqgkk48ysz3"; depends=[FME insol]; }; - pi0 = derive2 { name="pi0"; version="1.4-1"; sha256="09sjcmc6d45b7c7zfq150ncpyqsy3qkq2g88kv52csi7kwl7828n"; depends=[Iso kernlab limSolve LowRankQP Matrix numDeriv quadprog qvalue scatterplot3d]; }; picante = derive2 { name="picante"; version="1.6-2"; sha256="1zxpd8kh3ay6f3gdqkij1a6vnkr98dc1jib2r6br2kjyzshabcsd"; depends=[ape nlme vegan]; }; - picasso = derive2 { name="picasso"; version="1.0.1"; sha256="03108gga5a5r6cqi1c8l6n2bj81rg32277pdg6ja6d2n2c7pyah6"; depends=[MASS Matrix]; }; + picasso = derive2 { name="picasso"; version="1.2.0"; sha256="1bclrv0g2frdw6bfqacjbbzn9vg3354i2bh5zn6hkix7r8rqymzg"; depends=[MASS Matrix]; }; pid = derive2 { name="pid"; version="0.36"; sha256="1w6h09ddq8rv7k5xl4v6nhlkm0vnmim57mg0dzk2dv9dc4v8i141"; depends=[DoE_base FrF2 ggplot2 png]; }; piecewiseSEM = derive2 { name="piecewiseSEM"; version="1.2.1"; sha256="0c705ngyj2pf24vvqdld5rnf875pw64gs64l9f7nylbfrax39kbv"; depends=[lavaan lme4 nlme pbkrtest]; }; pifpaf = derive2 { name="pifpaf"; version="1.0.1"; sha256="0wj1fbhd871fnw7fjlbh0gdjz848mbwl1bzjp3cgmh9s7jnd2kci"; depends=[ggplot2 gridExtra MASS matrixcalc numDeriv sfsmisc]; }; - pillar = derive2 { name="pillar"; version="1.0.1"; sha256="0z972rvlasrjnni3wg4xfc01bcxcg3kdbsa9dwpby2xbp6d1hdvv"; depends=[cli crayon rlang utf8]; }; + pillar = derive2 { name="pillar"; version="1.1.0"; sha256="1gh3j2pbbf5y4d5nyqnlr0x27jjyvjjspcccmw61airs1n6rx8jq"; depends=[cli crayon rlang utf8]; }; pim = derive2 { name="pim"; version="2.0.1"; sha256="1m804clxc8m4nyzi4hhfy118527lgf2sb7589qd61fb83yh6hi8p"; depends=[BB nleqslv]; }; - pinbasic = derive2 { name="pinbasic"; version="1.1.0"; sha256="0ncbgkpgzp6w856y7ab0drci92rc9mx0j900vxd8ir69c00cm348"; depends=[fastcluster ggplot2 lubridate Rcpp reshape2 scales]; }; + pinbasic = derive2 { name="pinbasic"; version="1.2.0"; sha256="1sn4q9g2pw8z6gyxi302bd7p578ldy1g6419w56z7jgv7m8n7g73"; depends=[fastcluster ggplot2 lubridate Rcpp reshape2 scales]; }; pinfsc50 = derive2 { name="pinfsc50"; version="1.1.0"; sha256="1fja8xdqwsm4g223wmb2yg5fqmsg94hchzjd4qrqah1zb8vbdfdn"; depends=[]; }; pingr = derive2 { name="pingr"; version="1.1.2"; sha256="17fh2gjlmwy6wy8i24q76fivjig8jm05g9kvfz81q0h6b5zxnpmg"; depends=[]; }; - pinnacle_API = derive2 { name="pinnacle.API"; version="2.0.9"; sha256="1pq7q2wa4g8gxbyiascygnng53ihwmf5hsazwbyzjqgyyhi0hd9m"; depends=[data_table httr jsonlite magrittr openssl purrr rjson uuid]; }; + pinnacle_API = derive2 { name="pinnacle.API"; version="2.3.3"; sha256="1b6adns1xr3cgcj2mdjvl16cm2vjjgsj2l8m2c47plyc5jh05qmb"; depends=[data_table httr jsonlite magrittr openssl purrr rjson uuid]; }; pinnacle_data = derive2 { name="pinnacle.data"; version="0.1.4"; sha256="1sl36i2857b3xwx7iwgy8mkgjvz7nfa74ch1n8kcxbj59ib7mp8p"; depends=[tibble]; }; pinp = derive2 { name="pinp"; version="0.0.4"; sha256="1bjvhq9glrahknh46irfpg83wilpws923mm5l4aldb75xrbpliyw"; depends=[knitr rmarkdown]; }; - pinyin = derive2 { name="pinyin"; version="1.1.0"; sha256="15zv8rqz61a52pv47b0cdmmnm8ynb30ypyki7dprpdidrz3mhk8m"; depends=[]; }; pipe_design = derive2 { name="pipe.design"; version="0.5.1"; sha256="0r0szkdzifxmnnbr6675w8ij4zwqgxj3gwahc7a74mxr51f7qh8j"; depends=[ggplot2 gtools xtable]; }; - pipeGS = derive2 { name="pipeGS"; version="0.3"; sha256="0azbxhnxnj3ljndyd58qrh4rvvrgg77npy6l8fjbbjd92yfnrvd2"; depends=[]; }; + pipeGS = derive2 { name="pipeGS"; version="0.4"; sha256="0ki4i70r5f195b4jfv3hxlxz3zj57mhy2yf4984bwr11impilz5w"; depends=[]; }; pipeR = derive2 { name="pipeR"; version="0.6.1.3"; sha256="16lj227x24pviqb4dcrj7a55l31p5mm0cbwsb6m3y3n6k5wcd2nh"; depends=[]; }; pipefittr = derive2 { name="pipefittr"; version="0.1.2"; sha256="0pzd7f0rhn0rydncki666zlajdwyiay3apa17cb0xy5454d99mvh"; depends=[magrittr miniUI rstudioapi shiny stringr]; }; pipeliner = derive2 { name="pipeliner"; version="0.1.1"; sha256="1cyyd1bin89dh0zrhic3i541bj8nnaphg6jq2jqkhnxn2nvax11g"; depends=[]; }; pirate = derive2 { name="pirate"; version="1.0.0"; sha256="160mmyqdwbc4g7n7q9i4xcqp6h9bcpcz7vavsgdcpvs2mjfhfpjx"; depends=[ggplot2 MASS plyr Rcpp RcppArmadillo]; }; pitchRx = derive2 { name="pitchRx"; version="1.8.2"; sha256="0lg0xab40r8wzrww986l5q9jkg1m83g4bhsbh0kr7f2rv90av662"; depends=[ggplot2 hexbin MASS mgcv plyr XML2R]; }; piton = derive2 { name="piton"; version="0.1.1"; sha256="1265y4lv2m5nwrh25sahjkxwmivpxgh9shrdidlmaman7zs6cclr"; depends=[Rcpp]; }; + pivotaltrackR = derive2 { name="pivotaltrackR"; version="0.1.0"; sha256="024srncm288mn3bz6hv7ljzkchmnljk4yc2d4z7i05vsn7dzd2c6"; depends=[curl httr]; }; pivottabler = derive2 { name="pivottabler"; version="0.4.0"; sha256="1q7gmfrqx3sn32q9rrr0y3hywq0fvm5gs5d3jj6mqcbs53jqvzqc"; depends=[data_table dplyr htmltools htmlwidgets jsonlite R6]; }; pixels = derive2 { name="pixels"; version="0.1.0"; sha256="0lna0z2shs49kh48ipjnyigaa22wb9gm4mq970ldhh9msb7wcv55"; depends=[htmlwidgets miniUI shiny]; }; pixiedust = derive2 { name="pixiedust"; version="0.8.1"; sha256="1cpxsh3y9k66mkmks7mn3q4zjix1i8jc0dl62wrwwsp379vxcc3r"; depends=[broom checkmate dplyr Hmisc htmltools knitr magrittr scales stringr tidyr]; }; @@ -9112,7 +9295,6 @@ in with self; { placement = derive2 { name="placement"; version="0.1.1"; sha256="1narjb90sb5prvzfv2x30bz8y9aq8hqggza91ghwi47m99vm1dg6"; depends=[base64enc digest jsonlite RCurl stringi urltools]; }; plan = derive2 { name="plan"; version="0.4-2"; sha256="0vwiv8gcjdbnsxd8zqf0j1yh6gvbzm0b5kr7m47ha9z64d7wxch6"; depends=[]; }; planar = derive2 { name="planar"; version="1.6"; sha256="0x5xdb2afpc1w8s217hy765mz938kg5b5j7vzqzhlsh2dzdjccpj"; depends=[cubature dielectric ggplot2 plyr Rcpp RcppArmadillo reshape2 statmod]; }; - planor = derive2 { name="planor"; version="1.3-7"; sha256="01qlfv33adf3qyg6yzpigr4mm891xix39z8nkfz5d9q9iyx6fmx6"; depends=[bit64 conf_design Rcpp RcppArmadillo]; }; plantecophys = derive2 { name="plantecophys"; version="1.3-2"; sha256="1jj9rkhdmcnmp6fzbxmkfwmsdx2w7v923rv0xn5c5iv7wys7vwfm"; depends=[]; }; plaqr = derive2 { name="plaqr"; version="2.0"; sha256="15pdb57123m3cahvcsyrrvxjwxvs2f389yxip91gjxn68jf6cx1l"; depends=[quantreg]; }; plater = derive2 { name="plater"; version="1.0.1"; sha256="0v5b9r6iha18qvrjpbr1p8fy06nf31x63ch5cnb4axyqa0x5skpp"; depends=[dplyr]; }; @@ -9143,14 +9325,14 @@ in with self; { plotmo = derive2 { name="plotmo"; version="3.3.4"; sha256="1j2nc6n5kv6zvxwlr1cr1shxdcihw7d5k7z0a90phmdp834x8agy"; depends=[plotrix TeachingDemos]; }; plotpc = derive2 { name="plotpc"; version="1.0.4"; sha256="1sf7n7mfyaijldm24bc8r8pfm8pp9cyaja7am14z2wpj2j9f9vyq"; depends=[]; }; plotprotein = derive2 { name="plotprotein"; version="1.0"; sha256="14kfb4xxpfp8klz31kb7cpc39636ax2cx2483vqqkciccb28f0ks"; depends=[ade4 plotrix plyr seqinr XML]; }; - plotrix = derive2 { name="plotrix"; version="3.6-6"; sha256="07hywp3ym0gbpqdj3f4vhr0bhmynhby8vh6p1b9cm2hv26pzs9q4"; depends=[]; }; - plotrr = derive2 { name="plotrr"; version="0.2.0"; sha256="12kab7w32hcdqmwh3nfpk1zqkgnvpx3p0292w47643ahl26s9whj"; depends=[dplyr ggplot2]; }; + plotrix = derive2 { name="plotrix"; version="3.7"; sha256="0rw81n9p3d2i03b4pgcfj5blryc94f29bm9a4j9bnp5h8qjj6pry"; depends=[]; }; + plotrr = derive2 { name="plotrr"; version="1.0.0"; sha256="07ilqpa3ypqb2gpnq23r9v4kkfxz06mcak9si9adr9sf6c7gqwxz"; depends=[dplyr ggplot2]; }; plotwidgets = derive2 { name="plotwidgets"; version="0.4"; sha256="1w7c9grw4pyyra230196yq32snr4wdg6xi8vh4dx5df2v500wz22"; depends=[]; }; pls = derive2 { name="pls"; version="2.6-0"; sha256="15j59p5x0rkdrk7iqzkipsy50rsyjl31w8zxc4w3v1j5gzxhi1rx"; depends=[]; }; plsRbeta = derive2 { name="plsRbeta"; version="0.2.0"; sha256="1b8yldz5nzw3gilv9wk79bxcqb0hrgsxi2cn6qlby5nf9b4zmzv8"; depends=[betareg boot Formula MASS mvtnorm plsdof plsRglm]; }; plsRcox = derive2 { name="plsRcox"; version="1.7.2"; sha256="1c3ll13m27ndwlc9r79ilzl0i6cyp870x66swlbg6387whf7wn2r"; depends=[kernlab lars mixOmics pls plsRglm risksetROC rms survAUC survcomp survival]; }; plsRglm = derive2 { name="plsRglm"; version="1.1.1"; sha256="1bx1pl1pv47z3yj3ngkd97j10v2h8jqiybcqbm3kvqhgqydm07rp"; depends=[bipartite boot car mvtnorm]; }; - plsVarSel = derive2 { name="plsVarSel"; version="0.9.3"; sha256="1albqmyr3pb808rlwrfyqm79flc2lliwy7ni67wakrdgdfmpxfdl"; depends=[bdsmatrix genalg MASS mvtnorm pls progress]; }; + plsVarSel = derive2 { name="plsVarSel"; version="0.9.4"; sha256="19xz7ds4jx5ql999mwn9zs983rlshf14y4nlah8cfy9gpi0vl1g1"; depends=[bdsmatrix genalg MASS mvtnorm pls progress]; }; plsdepot = derive2 { name="plsdepot"; version="0.1.17"; sha256="1i00wxr451xpfy6dnvcm11aqf9106jsh5hj7gpds22ysgm4iq5w4"; depends=[]; }; plsdof = derive2 { name="plsdof"; version="0.2-7"; sha256="1z8z9m0nsnyy1fipzvm1srpxn3q6wjrlivmmki1f8plwkixkyc5y"; depends=[MASS]; }; plsgenomics = derive2 { name="plsgenomics"; version="1.5-1"; sha256="0d2k3h2cwwhcv7mbxqypd7g6yp1l6j32n3wslm348zmcx50j9pn4"; depends=[boot fields MASS plyr reshape2 RhpcBLASctl]; }; @@ -9159,17 +9341,19 @@ in with self; { plspolychaos = derive2 { name="plspolychaos"; version="1.1-1"; sha256="078arfv8z5nfrmsfi0n7hskmv394ysi6nhlskpy5cg37lqiwh0r1"; depends=[lhs MASS]; }; pltesim = derive2 { name="pltesim"; version="1.0"; sha256="0mvqp8di2gwhd9wc9kvnnpxd3hkr9b9lj6g5qlkqcbrgkq6fjahs"; depends=[coreSim ggplot2]; }; plugdensity = derive2 { name="plugdensity"; version="0.8-3"; sha256="1jdmq4kbs8yzgkf9f5dc7c8c52ia68fgavw7nsnc2hnz5ylw1qy9"; depends=[]; }; - plumber = derive2 { name="plumber"; version="0.4.2"; sha256="0ralab3hqz22hcd4rvi82dshsvic1qfnl631s2fcr8saddw8ki8n"; depends=[crayon httpuv jsonlite R6 stringi]; }; + plumber = derive2 { name="plumber"; version="0.4.4"; sha256="0fxbqp7x74x21dkkxklg7j0020pmvl9byfs9lgp1bxrnli84h6ik"; depends=[crayon httpuv jsonlite R6 stringi]; }; plumbr = derive2 { name="plumbr"; version="0.6.9"; sha256="1avbclblqfy57pd72ximvj3zq92q1w8vszvyf6fw75j5rfwdaibk"; depends=[objectSignals]; }; plus = derive2 { name="plus"; version="1.0"; sha256="1l7lvnq7vahj8m7knmr4q3wj00ar7iq89j45a2dqn2bh0qyj68ls"; depends=[]; }; plusser = derive2 { name="plusser"; version="0.4-0"; sha256="1g100dh8cvn9q09j0jbkw4xmwjdp1lm4651369975fm99nrlp1j9"; depends=[lubridate plyr RCurl RJSONIO]; }; plyr = derive2 { name="plyr"; version="1.8.4"; sha256="1igar5pcjqh0jyxv0z3jah8rz617vfa86vw0r5c7c031b7bj5db0"; depends=[Rcpp]; }; + pmap = derive2 { name="pmap"; version="0.3.2"; sha256="0mg3h4j0icnl58844b04vgl3yi18j92457da7s7cx79w0a2zpcsq"; depends=[data_table DiagrammeR dplyr stringr]; }; + pmatch = derive2 { name="pmatch"; version="0.1.1"; sha256="1vksygllism4dbdds3r5gikxjrq4mg9s21k3srpq05jk4s3j2xgh"; depends=[dplyr glue purrr rlang tibble]; }; pmc = derive2 { name="pmc"; version="1.0.2"; sha256="1pamxg2cwyg36w0xnggrv5w03lb12l25z2da7xm1jvr17h0ipqmh"; depends=[dplyr geiger ggplot2 ouch tidyr]; }; pmcgd = derive2 { name="pmcgd"; version="1.1"; sha256="1pybzvyjmzpcnxrjsas06diy3x83i1r5491s6ccyr63l56hs55d5"; depends=[mixture mnormt]; }; - pmclust = derive2 { name="pmclust"; version="0.1-9"; sha256="1p506d3gs0i46zjdia0pc71wwfv6nrfkmk5qaan5sdz6vn24zjhj"; depends=[MASS pbdBASE pbdDMAT pbdMPI]; }; + pmclust = derive2 { name="pmclust"; version="0.2-0"; sha256="1bpfix76ylmn5ds6y0v40mfad7znaa6dj5ngr4mzv96yy6mg13ns"; depends=[MASS pbdBASE pbdDMAT pbdMPI]; }; pmhtutorial = derive2 { name="pmhtutorial"; version="1.2"; sha256="1dviqazdk3ggxwwyv20409w3qadka0gbcgviwyywssn2x4cg0vih"; depends=[mvtnorm Quandl]; }; pmlr = derive2 { name="pmlr"; version="1.0"; sha256="1z3hbw4wabpai1q8kbn77nzxqziag8y04cidlfiw7z969s4pkmgl"; depends=[]; }; - pmml = derive2 { name="pmml"; version="1.5.3"; sha256="0hgmayydfcnw6w8jmcmx35y306s3s8ggnzcxpb1svkax0zr8h4d1"; depends=[stringr XML]; }; + pmml = derive2 { name="pmml"; version="1.5.4"; sha256="1acld1x0z5rgyxb5id071s3zvf2vbv4b9nngvxrb63ay3yyy124b"; depends=[stringr XML]; }; pmmlTransformations = derive2 { name="pmmlTransformations"; version="1.3.1"; sha256="1cxmp3fgsf3z71v6qpd9l9ilgda5knan7vqifxpgm8m7a30sp3f3"; depends=[]; }; pmr = derive2 { name="pmr"; version="1.2.5"; sha256="0dq97dfjmgxlhr3a2n20vyyzfmamcicw878hdxpw31lw02xs6yls"; depends=[]; }; png = derive2 { name="png"; version="0.1-7"; sha256="0g2mcp55lvvpx4kd3mn225mpbxqcq73wy5qx8b4lyf04iybgysg2"; depends=[]; }; @@ -9177,12 +9361,11 @@ in with self; { pnn = derive2 { name="pnn"; version="1.0.1"; sha256="1s6ib60sbdas4720hrsr5lsszsa474kfblqcalsb56c84gkl42ka"; depends=[]; }; poLCA = derive2 { name="poLCA"; version="1.4.1"; sha256="0bknnndcxsnlq6z9k1vbhqiib1mlzlx4badz85kc7a3xbrdrfs9f"; depends=[MASS scatterplot3d]; }; pocrm = derive2 { name="pocrm"; version="0.9"; sha256="0p7a7xm1iyyjgzyi7ik2n34gqc3lsnallrijzdakghb8k5cybm4m"; depends=[dfcrm nnet]; }; - pogit = derive2 { name="pogit"; version="1.1.0"; sha256="145dh48scxx4wcdr2g7548vg4g03w1ji7hz91752im9a27v7s4pa"; depends=[BayesLogit ggplot2 logistf plyr]; }; poibin = derive2 { name="poibin"; version="1.2"; sha256="12dm1kdalbqy8k7dfldf89v6zw6nd0f73gcdx32xbmry2l2976sa"; depends=[]; }; poilog = derive2 { name="poilog"; version="0.4"; sha256="0bg03rd5rn4rbdpiv87i8lamhs5m7n7cj8qf48wpnirg6jpdxggs"; depends=[]; }; pointRes = derive2 { name="pointRes"; version="1.1.3"; sha256="0yfzidc93ghpf116lxbx4fr0d71wl79y3nz6mkirx4pli6gb8x8d"; depends=[ggplot2 gridExtra plyr TripleR]; }; pointblank = derive2 { name="pointblank"; version="0.1"; sha256="11v0x264065iljhv77m4yc44zqd0i9bg95c6qiv8d85nf97201hh"; depends=[digest dplyr Hmisc htmltools knitr lazyWeave lubridate magrittr mailR pixiedust purrr readr rJava rlang rmarkdown stringr tibble tidyr]; }; - pointdensityP = derive2 { name="pointdensityP"; version="0.2.1"; sha256="013vamdh987w56bmz0m6j2xas4ycv1zwxs860rs5z4i55dhgf9kh"; depends=[]; }; + pointdensityP = derive2 { name="pointdensityP"; version="0.3.2"; sha256="1wi1lv5y589vmibvzigpqk0m9k5m265brhnz520g7wa4h3wpsdq3"; depends=[data_table]; }; poio = derive2 { name="poio"; version="0.0-3"; sha256="1smbnqjlicaqq2hswl910yiirzb9zikbk4pqxm9pwpixywj0nkys"; depends=[assertive_base assertive_files assertive_properties assertive_sets assertive_strings assertive_types devtools digest dplyr magrittr R6 stringi tibble whoami]; }; poisDoubleSamp = derive2 { name="poisDoubleSamp"; version="1.1"; sha256="13wyj9jf161218y4zjv2haavlmanihp9l59cvh7x8pfr9dh2dwr8"; depends=[Rcpp]; }; poisbinom = derive2 { name="poisbinom"; version="1.0.1"; sha256="0mjxg0s3nck7qrmq4bbrhwxfwr6fqml54s9k8q1mkfzlifa7qyf7"; depends=[Rcpp]; }; @@ -9192,13 +9375,13 @@ in with self; { poker = derive2 { name="poker"; version="0.8.8"; sha256="14ik77440z22k4kwq0p1fn7adzi0p8mh8j8hd7ayinvrab4b5r85"; depends=[]; }; polidata = derive2 { name="polidata"; version="0.1.0"; sha256="07641v0dnn161kyxx7viplkf8c3r51hd4hd5pzmcph4y4387r01i"; depends=[jsonlite RCurl]; }; poliscidata = derive2 { name="poliscidata"; version="1.2.0"; sha256="0vn9wdlh3bi24mcq0r4ani2b0hhlg1za1z6fw8ikz7952gpacqk8"; depends=[abind car descr ENmisc gplots Hmisc plotrix plyr survey weights xtable]; }; - politeness = derive2 { name="politeness"; version="0.1.1"; sha256="1pfl8x23zwbaqpy687f3xjmvdpgvggm6ylajyarfirh2v8jzj7ga"; depends=[data_table ggplot2 glmnet quanteda ROCR spacyr stringr textir tm]; }; + politeness = derive2 { name="politeness"; version="0.2.2"; sha256="06h4g9xbk5dbaqzhybqc0mppa61ypb7ryi6hghqnqyj32y8r6dbr"; depends=[data_table ggplot2 glmnet quanteda spacyr stringr textir tm]; }; pollen = derive2 { name="pollen"; version="0.53.00"; sha256="0gkmy5g16794zrr21g6yap0k4xl1bvsq5npyivsdflvvrg985nzw"; depends=[dplyr lubridate purrr]; }; pollstR = derive2 { name="pollstR"; version="2.0.0"; sha256="0lcxhi1mazs8nh9hbbqyqx4axn5lji5fnp0kxrjwjxmzf59nksj8"; depends=[httr lubridate purrr stringr]; }; polmineR = derive2 { name="polmineR"; version="0.7.5"; sha256="0yz2c915jrf3dqadi6px9jidfwr4jd23rjrpas4xg4m6dx0f70jm"; depends=[data_table DT jsonlite Matrix pbapply R6 slam tm]; }; polspline = derive2 { name="polspline"; version="1.1.12"; sha256="0chg5f6fq5ngjp1kkm4kjyxjc3kk83ky2ky5k7q3rhd8rkhd4szw"; depends=[]; }; polyCub = derive2 { name="polyCub"; version="0.6.1"; sha256="16nr83gmv6pnk89nqxh8ihzacb0y8l4lz05c8sp6whmr26ja9vnf"; depends=[sp]; }; - polyPK = derive2 { name="polyPK"; version="2.0.0"; sha256="0fkhqib036w2ycskbwv669r7fy82gnn0b99ww0w5kx3d9b2xvzfl"; depends=[circlize corrplot gplots Hmisc impute imputeLCMD missForest mixOmics pcaMethods PKNCA plyr ropls samr sqldf xlsx]; }; + polyPK = derive2 { name="polyPK"; version="3.0.0"; sha256="1vdfsad2b9habvm2ikjgn7ihnm851q9lqmgqjlsl737ka1vsgisf"; depends=[circlize corrplot gplots Hmisc impute imputeLCMD mixOmics pcaMethods pkr plyr ropls samr sqldf xlsx]; }; polySegratio = derive2 { name="polySegratio"; version="0.2-4"; sha256="05kvj475zhlrmp7rm691cfs28igp4ac2cn2xxf7axx09v1nq33db"; depends=[gdata]; }; polySegratioMM = derive2 { name="polySegratioMM"; version="0.6-3"; sha256="1y4kzb1p3aw7ng8mv1hszpvb5hwwxy4vg34mhhk705ki4jy8jgvp"; depends=[coda gtools lattice polySegratio]; }; polyaAeppli = derive2 { name="polyaAeppli"; version="2.0"; sha256="0kyz3ap92xz7aqyviyrpggfmicy1gybrx7y19djsmixcwz53zqch"; depends=[]; }; @@ -9207,12 +9390,14 @@ in with self; { polyclip = derive2 { name="polyclip"; version="1.6-1"; sha256="07xxw5ik30ds18kv808hynzmz3w351k6lj4ifz9kak0s7xsaqfn3"; depends=[]; }; polycor = derive2 { name="polycor"; version="0.7-9"; sha256="0d0756faksviic5jrc47fg6l3wsm9r2wlbnxiw08563rv7shbvb7"; depends=[Matrix mvtnorm]; }; polyfreqs = derive2 { name="polyfreqs"; version="1.0.2"; sha256="13859vbpys5yj1qiapyzv9wlvi6x6k0rm335bsi1v07ch3x2bh3b"; depends=[Rcpp]; }; + polymapR = derive2 { name="polymapR"; version="1.0.13"; sha256="18bwi149y2622bdcyb5gcq0mxwalg6dsv3dgsnx2km4kd5x1a4ck"; depends=[combinat doParallel foreach igraph knitr Matrix MDSMap]; }; polynom = derive2 { name="polynom"; version="1.3-9"; sha256="1s4xxv5rvpigawknvq27v9vzvs83phfsj5h8mim2lmf5bj950nnk"; depends=[]; }; polypoly = derive2 { name="polypoly"; version="0.0.2"; sha256="00c1hrnf575awvh0rlsnf6nkgi9p3fnqhd1knamkgb4icwi5s46d"; depends=[ggplot2 reshape2 rlang tibble]; }; polysat = derive2 { name="polysat"; version="1.7-2"; sha256="0ahx2pvlv2vdfiskwgawcrp447249ha0dq4qkhav3hpyvdg3in38"; depends=[]; }; polywog = derive2 { name="polywog"; version="0.4-0"; sha256="0wl9br0g4kgi3nz2fq28nsk6fw0ll0y715v4vz8lv3pvfwc7518j"; depends=[foreach Formula glmnet iterators Matrix miscTools ncvreg Rcpp stringr]; }; pom = derive2 { name="pom"; version="1.1"; sha256="02jv19apn0kmp1ric2cxajlaad2fmsz4nm4izd2c3691vzas7l83"; depends=[matrixcalc]; }; - pomp = derive2 { name="pomp"; version="1.15"; sha256="1cba1wj1af7rb3ng8lm1m7zbvcjspak4ppz36ix5hbs956mxi8ss"; depends=[coda deSolve digest mvtnorm nloptr subplex]; }; + pomp = derive2 { name="pomp"; version="1.16"; sha256="1ns1ygza76dqrrscm7ajv3pbf5wgvcfsfbjxc20b50z30zjm7712"; depends=[coda deSolve digest mvtnorm nloptr subplex]; }; + pompom = derive2 { name="pompom"; version="0.1.4"; sha256="0j37gq6lfccypclhrp7w3yfgsjbhfgqwg7x87r6rgywz6b3fnsgh"; depends=[ggplot2 lavaan qgraph reshape2]; }; pooh = derive2 { name="pooh"; version="0.3-2"; sha256="0qwa5j91aypasvsf4xcfbl6lz7llawdr38jiflzmfak2ad72rv7j"; depends=[]; }; pool = derive2 { name="pool"; version="0.1.3"; sha256="0ca51zi6nx62dlrg0156a6iilrfmvq6hz6hx83qrd5g7wmjmpkrp"; depends=[DBI dbplyr dplyr later R6]; }; pop = derive2 { name="pop"; version="0.1"; sha256="0hbxdrkasb69x7ipddvyrzl5vvc7dd6rzj1vy7v3chg3rzgq89cj"; depends=[igraph MASS]; }; @@ -9223,12 +9408,13 @@ in with self; { popReconstruct = derive2 { name="popReconstruct"; version="1.0-4"; sha256="14lp0hfnzbiw81fnq7gzpr4lxyfh3g0428rm9jwjh631irz3fcc9"; depends=[coda]; }; popbio = derive2 { name="popbio"; version="2.4.3"; sha256="1c34izyp6gpic3yv1rhg1snv2irw0bj9r1w9b892l7x0mxxmn2bl"; depends=[]; }; popdemo = derive2 { name="popdemo"; version="0.2-3"; sha256="0r3qdvwjwqzqxk3zp9vfzxwmc5fhjzn0ka91b37g62nanwxiyayw"; depends=[expm]; }; + popkin = derive2 { name="popkin"; version="1.0.5"; sha256="147ic0d7cgs4x9vz4jm4wd6ckikn0s8a0q1mknmcrcfisq8zim75"; depends=[RColorBrewer Rcpp RcppEigen]; }; poplite = derive2 { name="poplite"; version="0.99.19"; sha256="0y1l21clp9b5m50chqnqmvyd6rsk6xgn2bqf1877gx3h1qidh5fm"; depends=[DBI dbplyr dplyr igraph lazyeval RSQLite]; }; - poppr = derive2 { name="poppr"; version="2.5.0"; sha256="18r89wdad8yja8jgdvispwx67ssj26yf2rdd1j4x0w9r3cpxxkmm"; depends=[ade4 adegenet ape boot dplyr ggplot2 igraph magrittr pegas phangorn rlang shiny vegan]; }; + poppr = derive2 { name="poppr"; version="2.6.1"; sha256="1ib6z5rpx8xr5wfvjiy56fn9vgjda4d7x16n6wn4377b5fi4l3zp"; depends=[ade4 adegenet ape boot dplyr ggplot2 igraph magrittr pegas phangorn rlang shiny vegan]; }; popprxl = derive2 { name="popprxl"; version="0.1.3"; sha256="1l842zgn04s8ghbcp8s2lzg7lgc809xd7hg9crnyp23c2cr0jlvi"; depends=[poppr readxl]; }; popsom = derive2 { name="popsom"; version="4.2"; sha256="11d6z3qsq94k0557pnwa0h4pc718360lvg9jkblp8abnj52lcvvv"; depends=[class fields ggplot2 som]; }; poptrend = derive2 { name="poptrend"; version="0.1.0"; sha256="0hypxpb18azg6q1mqrphbx3x262h9ybwhlkb8fyd6vr7jjb5wn3h"; depends=[mgcv]; }; - population = derive2 { name="population"; version="0.1"; sha256="1xcm38hipasf6x5grsn7dqayy2g5mwppx2dvi5lwax5a6dqjk792"; depends=[abind]; }; + population = derive2 { name="population"; version="0.2"; sha256="1k0hwh17dyfbbyw8gprsz1klx6l2ncq5mxkmnjmknlnrkpah0bbl"; depends=[abind]; }; portes = derive2 { name="portes"; version="2.1-4"; sha256="09liy2bia76h5dh21s8skq9pj8k4wpq5agwrmr1pnvlpgc8m2b60"; depends=[]; }; portfolio = derive2 { name="portfolio"; version="0.4-7"; sha256="0gs1a4qh68xsvl7yi6mz67lamwlqyqjbljpyax795piv46kkm06p"; depends=[lattice nlme]; }; portfolioSim = derive2 { name="portfolioSim"; version="0.2-7"; sha256="1vf46882ys06ia6gfiibxx1b1g81xrg0zzman9hvsj4iky3pwbar"; depends=[lattice portfolio]; }; @@ -9242,13 +9428,15 @@ in with self; { powerCompRisk = derive2 { name="powerCompRisk"; version="0.1.1"; sha256="0qsgibjzf6qx778s126c2k7nbf8f10gsh4cfkkhkxcv344rqxg10"; depends=[MASS mvtnorm]; }; powerEQTL = derive2 { name="powerEQTL"; version="0.1.3"; sha256="1045vkzl5p20mqlsm0j6vnyyvfz5v6jyy443c38sw1cps0a09i1n"; depends=[powerMediation]; }; powerGWASinteraction = derive2 { name="powerGWASinteraction"; version="1.1.3"; sha256="1i8gfsk9qzx54yn661i4x9k7n7b6r1jd808wv1hcq7870mzyb27k"; depends=[mvtnorm pwr]; }; - powerMediation = derive2 { name="powerMediation"; version="0.2.8"; sha256="1mfsap5li6limmr9pfv98wgsnx7a23abjx067vrvg0s5m03v52yi"; depends=[]; }; - powerSurvEpi = derive2 { name="powerSurvEpi"; version="0.0.9"; sha256="0f8i867zc1yjdp66rjb1cp92fcfrlq167z3d0c4iv355wv4s35az"; depends=[survival]; }; + powerMediation = derive2 { name="powerMediation"; version="0.2.9"; sha256="1rk8h8qn4b68ra5h5hiy9fvvbpskj9y806rwrvl1l7gs7xlmji7l"; depends=[]; }; + powerSurvEpi = derive2 { name="powerSurvEpi"; version="0.1.0"; sha256="1xxicvw113mc2y889rklws3xml5z64sgjpn4wg95gbw6nadch7zz"; depends=[survival]; }; powerbydesign = derive2 { name="powerbydesign"; version="1.0.3"; sha256="0dv4j0kwdzvxnq587vs1dsy2yci3v3q2smncpscpcsalp38rvx4i"; depends=[gdata ggplot2 lme4 MASS plyr reshape2 stringr]; }; powerlmm = derive2 { name="powerlmm"; version="0.1.0"; sha256="0fsd3h94va5hn0nqxdalchw02s4daxq8dlgdxb5a4nigg64lfkm2"; depends=[ggplot2 ggsci gridExtra lme4 lmerTest MASS Matrix pbmcapply scales testthat]; }; powerpkg = derive2 { name="powerpkg"; version="1.5"; sha256="0mbk2fda2fvyp1h5lk5b1fg398xybbjv0z6kdx7w7xj345misf7l"; depends=[]; }; powerplus = derive2 { name="powerplus"; version="3.1"; sha256="0ayp6x34hkzgris4j3zbbs0r23n81bhww3wgfyy630ri4sk6brrn"; depends=[complexplus expm MASS Matrix phonTools]; }; + ppcSpatial = derive2 { name="ppcSpatial"; version="0.1.0"; sha256="0dcp94g5b2wcw388z100kaz8m48xxzi9rjaypj9pdjx3mwh0bxmj"; depends=[dplyr ggplot2 htmltools htmlwidgets leaflet magrittr PakPC2017 rgdal scales shiny tidyr tmap]; }; ppcc = derive2 { name="ppcc"; version="1.0"; sha256="022c8w7ws7fw6yy572rn6m8ki14d2ph7nd2hk2c6mmx2c4lbc20v"; depends=[]; }; + ppclust = derive2 { name="ppclust"; version="0.1.1"; sha256="10fcyayda634lg5g992g21casqx5k0jni9r30km5rczzib7cz9gg"; depends=[inaparc MASS]; }; ppcor = derive2 { name="ppcor"; version="1.1"; sha256="1x9b2kb8s0bp92b17gby0jwzzr3i4cf3ap9c4nq7m8fav72g0y3a"; depends=[MASS]; }; ppiPre = derive2 { name="ppiPre"; version="1.9"; sha256="07k2mriyz1wmxb5gka0637q4pmvnmd1j16mnkkdrsx252klgjsdw"; depends=[AnnotationDbi e1071 GO_db GOSemSim igraph]; }; ppls = derive2 { name="ppls"; version="1.6-1"; sha256="1r3h4pf79bkzpqdvyg33nwjabsqfv7r8a4ziq2zwx5vvm7mdy7pd"; depends=[MASS]; }; @@ -9257,18 +9445,18 @@ in with self; { pqantimalarials = derive2 { name="pqantimalarials"; version="0.2"; sha256="0azxkf1rvk9cyzr4gbp4y2vcxrxw3d4f002d5gjkvv1f4kx8faw1"; depends=[plyr RColorBrewer reshape2 shiny]; }; prLogistic = derive2 { name="prLogistic"; version="1.2"; sha256="1abwz7nqkz2qbyqyr603kl9a3rkad3f4vxhck6a9kl80xrmfrj9s"; depends=[boot Hmisc lme4]; }; prabclus = derive2 { name="prabclus"; version="2.2-6"; sha256="0qjsxrx6yv338bxm4ki0w9h8hind1l98abdrz828588bwj02jya1"; depends=[MASS mclust]; }; - pracma = derive2 { name="pracma"; version="2.1.1"; sha256="1mylrrkyycaw9m01mmg6xkn5wgdlabs5l0qyws60r0n2ycblp897"; depends=[]; }; + pracma = derive2 { name="pracma"; version="2.1.4"; sha256="1ygm81i7mqvh229dp9935djjyb120p3bqvaf4k572sa4q63fzjhc"; depends=[]; }; pragma = derive2 { name="pragma"; version="0.1.3"; sha256="1n30a346pph4d8cj4p4qx2l6fnwhkxa8yxdisx47pix376ljpjfx"; depends=[]; }; prais = derive2 { name="prais"; version="0.1.1"; sha256="0vv6h12gsbipi0gnq0w6xh6qvnvc0ydn341g1gnn3zc2n7cx8zcn"; depends=[]; }; praise = derive2 { name="praise"; version="1.0.0"; sha256="1gfyypnvmih97p2r0php9qa39grzqpsdbq5g0fdsbpq5zms5w0sw"; depends=[]; }; praktikum = derive2 { name="praktikum"; version="0.1"; sha256="0kkydgglvqw371fxh46fi86fmdndhwq1n8qj0ynbh2gz1cn86aw1"; depends=[]; }; - praznik = derive2 { name="praznik"; version="1.0.0"; sha256="0n8bjar7s5d6ylw78nyf2p41wz57mh43mq2zscajqzpcw5z0nmvc"; depends=[]; }; - prc = derive2 { name="prc"; version="2015.6-24"; sha256="0sf664zqcq6xylhd7rvm2l2xj3f4j6llaj7j4b4847wfxnas2j02"; depends=[kyotil nlme]; }; + praznik = derive2 { name="praznik"; version="3.0.0"; sha256="0fxs7nvpg8vifc5x48g1lr7cpi0v24rnl28fjiwq5730hypmm8nj"; depends=[]; }; + prc = derive2 { name="prc"; version="2018.1-31"; sha256="0xvf1f202qwpjb1kh469jk45l592q7bfzngyi8ifry94bi7mphp7"; depends=[kyotil nlme]; }; prcbench = derive2 { name="prcbench"; version="0.7.3"; sha256="0xdmwjhxpcdaiqawhmlpr4ddlx22xk3rywa70jpm1vk5hc9pwivk"; depends=[assertthat ggplot2 gridExtra memoise precrec PRROC R6 rJava ROCR]; }; prclust = derive2 { name="prclust"; version="1.3"; sha256="0p0sf8248aigs99py8mpzz743jnrf7n1nv5shag15arxz9yx7zn3"; depends=[Rcpp]; }; prcr = derive2 { name="prcr"; version="0.1.5"; sha256="1hfr0jijnj5nd25rh16i81bsz8kwz0q9vmn7bqgy467cwvypg9k2"; depends=[class dplyr ggplot2 irr lpSolve purrr tibble tidyr]; }; - pre = derive2 { name="pre"; version="0.4"; sha256="0az0dfmzfzin7zbbgqzg8y6f6dajj2y88dddlzy3rav580n3dvwg"; depends=[earth Formula glmnet MatrixModels partykit stringr]; }; - preText = derive2 { name="preText"; version="0.6.1"; sha256="0lh67rpjx8v36kis22yp22c79kgzqv0lan6cpzdj53m625zmdbaj"; depends=[cowplot ecodist ggplot2 proxy quanteda reshape2 topicmodels vegan]; }; + pre = derive2 { name="pre"; version="0.4-1"; sha256="1pcc8njy43pfpszrgs782fgwsnh8h990giq8q7ra6vvwyhgza8m3"; depends=[earth Formula glmnet MatrixModels partykit stringr]; }; + preText = derive2 { name="preText"; version="0.6.2"; sha256="0pcnqssv542cfajzrqfsbq0jf628nnmcb3nryvd7d5wk4wdkji4q"; depends=[cowplot ecodist ggplot2 proxy quanteda reshape2 topicmodels vegan]; }; precintcon = derive2 { name="precintcon"; version="2.3.0"; sha256="1sf0mfqa77aqhbx3hg8pv582ibmfnv6vigqcd3xqsbq7nigy2ms9"; depends=[ggplot2 scales]; }; precrec = derive2 { name="precrec"; version="0.9.1"; sha256="0kppl4x8ji8hzll5wss1nzlk8qvf4g78f14x4c2b8dcxjikgl939"; depends=[assertthat data_table ggplot2 gridExtra Rcpp]; }; predatory = derive2 { name="predatory"; version="1.2"; sha256="1qbkifx16ixzimshm8lsg3d1y7cj453ksn8cpwy03xql6b19r8x4"; depends=[readr stringr]; }; @@ -9290,8 +9478,8 @@ in with self; { preseqR = derive2 { name="preseqR"; version="3.1.2"; sha256="0xafl51yc0y8rxwz3cc0a6mjv7ajgn8bzpynxgmkb3gjx0jla5kp"; depends=[polynom]; }; prettyGraphs = derive2 { name="prettyGraphs"; version="2.1.5"; sha256="19jag5cymancxy5lvkj5mkhdbxr37pciqj4vdvmxr82mvw3d75m4"; depends=[]; }; prettyR = derive2 { name="prettyR"; version="2.2"; sha256="026cgbrqs799lg06qlwx1r9ramil790qxrb1cyl4w7mzf8sfpgn9"; depends=[]; }; - prettycode = derive2 { name="prettycode"; version="1.0.0"; sha256="1zba83b5sk8jyag8jz8gipn6qpxwfsfg1xcxamfvpmzjicajzhbx"; depends=[crayon withr]; }; - prettydoc = derive2 { name="prettydoc"; version="0.2.0"; sha256="1zpvi4lyjazhj2h6m3j46x93s9c2300xqylaqy6gp1yjn9im36dp"; depends=[rmarkdown]; }; + prettycode = derive2 { name="prettycode"; version="1.0.1"; sha256="0iw38q5yx92m71wrbp52d14bl3nqwpjrd57l2w9chasmlrjnl2aw"; depends=[crayon withr]; }; + prettydoc = derive2 { name="prettydoc"; version="0.2.1"; sha256="00amqn0izg2jrn96pmm5papqmp0chn25msjk94nim3avqg9x4x92"; depends=[rmarkdown]; }; prettymapr = derive2 { name="prettymapr"; version="0.2.2"; sha256="151jp0l728krmxcyzwjh01mvd1zhqijq0nsgjaqsh0q8n3jmndi0"; depends=[digest httr plyr rjson]; }; prettyunits = derive2 { name="prettyunits"; version="1.0.2"; sha256="0p3z42hnk53x7ky4d1dr2brf7p8gv3agxr71i99m01n2hq2ri91m"; depends=[assertthat magrittr]; }; prevR = derive2 { name="prevR"; version="3.3"; sha256="11syifnv0mgbybsphgaj3a2j29p2q0l4y4w008n2r9s359arjj8m"; depends=[directlabels fields foreign GenKern ggplot2 gstat maptools rgdal sp]; }; @@ -9313,11 +9501,11 @@ in with self; { proPubBills = derive2 { name="proPubBills"; version="0.1"; sha256="1fpn9x31jjahdyk0f30mbb3ijj4dsghrq9q94r04pjsgr2jw23zx"; depends=[dplyr httr stringr]; }; probFDA = derive2 { name="probFDA"; version="1.0.1"; sha256="093k50kyady54rkrz0n9x9z98z5ws36phlj42j25yip7pzhfd6sv"; depends=[MASS]; }; probemod = derive2 { name="probemod"; version="0.2.1"; sha256="1cgjr03amssc9rng8ky4w3abhhijj0d2byzm118dfdjzrgmnrf9g"; depends=[]; }; - probout = derive2 { name="probout"; version="1.0"; sha256="05mmy4cy8a7v5j3adbsy8qyzgy6nqkv5mp577071wavp7889kmc6"; depends=[FNN MASS mclust]; }; + probout = derive2 { name="probout"; version="1.1.1"; sha256="1hasrvxdig8n3fhzsbmq27050dyanzp1j0qlybnrkb41k9gyljda"; depends=[FNN MASS mclust]; }; probsvm = derive2 { name="probsvm"; version="1.00"; sha256="1k0zysym7ncmjy9h7whwi49qsfkpxfk7chfdjrydl6hn6pscis37"; depends=[kernlab]; }; proccalibrad = derive2 { name="proccalibrad"; version="0.14"; sha256="0vr55rpcqh9wvy3bklssrimp42x85w3sanjgshfij657v68vmx46"; depends=[]; }; processcontrol = derive2 { name="processcontrol"; version="0.1.0"; sha256="0c0bksgq24blfkdgp5bn49sjnaajrg5bag8qzb5zffxbhnm4s30x"; depends=[plyr]; }; - processmapR = derive2 { name="processmapR"; version="0.2.0"; sha256="02gj8h30bmz02qhr2xw6b72sa872cn57blszhw1llfmk7ml1zys2"; depends=[bupaR data_table DiagrammeR dplyr edeaR ggplot2 ggthemes glue miniUI purrr shiny stringr]; }; + processmapR = derive2 { name="processmapR"; version="0.2.1"; sha256="0qlz6av6f0ik62md0wa5il3id55rnbwc6i34sxjhv9awwvm2ygrv"; depends=[bupaR data_table DiagrammeR dplyr edeaR forcats ggplot2 ggthemes glue hms miniUI plotly purrr RColorBrewer rlang scales shiny stringr]; }; processmonitR = derive2 { name="processmonitR"; version="0.1.0"; sha256="1ckr438yifpsh095j6bb65dq3rdm7cfm8k7qsjmcqwjkww4j74z8"; depends=[bupaR dplyr edeaR ggplot2 magrittr miniUI shiny]; }; processx = derive2 { name="processx"; version="2.0.0.1"; sha256="0yw23lp9xjvbpswzghkmjiayw7p19hbvmgv58k3i6b8g5nav4qcg"; depends=[assertthat crayon debugme R6]; }; prodest = derive2 { name="prodest"; version="0.1.1"; sha256="1j8gqxswwvnd45givadlvblnsc3qli228gz77d7alc19qf1wrrvz"; depends=[DEoptim dplyr Matrix Rsolnp]; }; @@ -9327,27 +9515,30 @@ in with self; { productplots = derive2 { name="productplots"; version="0.1.1"; sha256="1igs6d0qwgsfk0z3vxabgv5kva9w2kpzi535gjfdrbx34j4pf3gx"; depends=[ggplot2 plyr]; }; prof_tree = derive2 { name="prof.tree"; version="0.1.0"; sha256="0mjvxaacrgkzl0f1wn3fpgah4jh720safni66ri0dnriwcxis6rz"; depends=[data_tree]; }; profdpm = derive2 { name="profdpm"; version="3.3"; sha256="07lhjavrx4fa5950w928mfpddmmnmvdapl5n6mv49m8h3bxs4nmy"; depends=[]; }; + profile = derive2 { name="profile"; version="1.0"; sha256="0m7fm490gqkbmnbdq3lac87zqb9qyx6546rlpa130rq1jnlgxfp6"; depends=[rlang tibble withr]; }; profileModel = derive2 { name="profileModel"; version="0.5-9"; sha256="1p9b9jr5842im195d60ja82pp7vbk85vs8b0r3fnf62j4b92aky9"; depends=[]; }; profileR = derive2 { name="profileR"; version="0.3-4"; sha256="1vinqddhd4jbncn37rbypja7ili3kwmj2sacgf491s94zil4ijik"; depends=[ggplot2 lavaan RColorBrewer reshape]; }; profilr = derive2 { name="profilr"; version="0.1.0"; sha256="0rw5cjvvrgsdmhgrsaw4skfdk8h488b6mkmibgjj3dd3x0j3caq6"; depends=[]; }; - profmem = derive2 { name="profmem"; version="0.4.0"; sha256="1nnk145hzr447z9frk3c58xks3jp0cdl7cv8schqnyjxqlv967g9"; depends=[]; }; + profmem = derive2 { name="profmem"; version="0.5.0"; sha256="152dka39p9i17ydlhc92y6x6i8girn3wab1ycbqb9kva07j9d2h8"; depends=[]; }; profr = derive2 { name="profr"; version="0.3.1"; sha256="1w06mm89apggy6wc273b2nsp95smajr8sf3dwshykivv7mhkxs5d"; depends=[plyr stringr]; }; proftools = derive2 { name="proftools"; version="0.99-2"; sha256="1vx0270sgx15dl6x3nnx13v5y4c0m18yvrhiycl429zky0jzxfr0"; depends=[]; }; - profvis = derive2 { name="profvis"; version="0.3.3"; sha256="0lj4cr9jkbnvb4876kzkwy8gzrw2flbbwb0gw744f4q0240zybs6"; depends=[htmlwidgets stringr]; }; + profvis = derive2 { name="profvis"; version="0.3.4"; sha256="0kx184gxhacnhk6kfj650v4a5bzlgfwls7y9rn813diyg60xbmzh"; depends=[htmlwidgets stringr]; }; progenyClust = derive2 { name="progenyClust"; version="1.2"; sha256="0azp5pvk316s8xbawcqwqfd80fxb4xn8hc6aq87xwksc6fhwp94l"; depends=[Hmisc]; }; prognosticROC = derive2 { name="prognosticROC"; version="0.7"; sha256="0lscsyll41hpfzihdavygdzqw9xxjp48dmy4i17qsx5h01jl1h4i"; depends=[survival]; }; progress = derive2 { name="progress"; version="1.1.2"; sha256="1fxakchfjr5vj59s9sxynd7crpz97xj42438rmkhkf3rjpyspx59"; depends=[prettyunits R6]; }; proj4 = derive2 { name="proj4"; version="1.0-8"; sha256="06r3lavgixrsa52d1v31laqcbw6fb9xn23akv39hvaib78diglv9"; depends=[]; }; + projections = derive2 { name="projections"; version="0.0.1"; sha256="1qrgazxdihzp1i4aghkwkh6q5g1all39bvd83gwh4hj9pxm2w5zy"; depends=[distcrete ggplot2 incidence]; }; projector = derive2 { name="projector"; version="0.0.1"; sha256="0l3nfy5s3xj4cl96h74ss6ndpir33kk3gj4q1fjd5invx6f75spx"; depends=[assertthat dbscan plotly RColorBrewer RcppAnnoy Rtsne shiny shinyjs shinythemes]; }; projmanr = derive2 { name="projmanr"; version="0.1.0"; sha256="0mfp1b00a5ndw7011q3jivxm8bsykm6q7pm7dplmqffgs0p3drvv"; depends=[ggplot2 igraph R6 tidyr]; }; - promote = derive2 { name="promote"; version="1.0.0"; sha256="0jqb314c5a1j2784k0i9dgblr1zp11bqk4l6play5nlp47nb0sli"; depends=[httr jsonlite stringr]; }; + projpred = derive2 { name="projpred"; version="0.7.0"; sha256="1n2lwzc3hvjr4d6csc2nqlxqcrr979h52lfvbr81alybkg1nbqch"; depends=[ggplot2 loo Rcpp RcppArmadillo rstan rstanarm]; }; + promote = derive2 { name="promote"; version="1.0.1"; sha256="1f8f5rm25fx4146hf3rds2lb7qpfz17fa5r2a1f4s3q5p86svgqn"; depends=[httr jsonlite stringr]; }; prop_comb_RR = derive2 { name="prop.comb.RR"; version="1.2"; sha256="10s52fkq7rv6v4gw1yd46f0fbg89ksim0qhgb5jbglzrqh585ny5"; depends=[rootSolve]; }; propOverlap = derive2 { name="propOverlap"; version="1.0"; sha256="0q72z9vbkpll4i3wy3fq06rz97in2cm3jjnvl6p9w8qc44zjlcyl"; depends=[Biobase]; }; - propagate = derive2 { name="propagate"; version="1.0-4"; sha256="18vyh4i4zlsmggfyd4w0zrznk75m84k08p1qa9crind04n5581j1"; depends=[ff MASS minpack_lm Rcpp tmvtnorm]; }; + propagate = derive2 { name="propagate"; version="1.0-5"; sha256="168ya3a74fjqwl9bzsb3ywzypb90h8snymgvxryrx7plrfcmwlav"; depends=[ff MASS minpack_lm Rcpp tmvtnorm]; }; properties = derive2 { name="properties"; version="0.0-8"; sha256="1x7zln1indckl090p9kv40snamkac3b8q45387jdqxajmsallxmb"; depends=[]; }; prophet = derive2 { name="prophet"; version="0.2.1"; sha256="10qd3w9jgk3d53465005b0di2lxa6cg67lj81fzmf2h919ai9i5m"; depends=[dplyr extraDistr ggplot2 Rcpp rstan scales tidyr]; }; proportion = derive2 { name="proportion"; version="2.0.0"; sha256="0a71f6hz6blb7550m9x0di84vp51yjhnn952301rwlrh3axf6dbr"; depends=[ggplot2 TeachingDemos]; }; - propr = derive2 { name="propr"; version="3.1.1"; sha256="09dqq93k4xnp4mv6j5vrn1w4z38bc73q082hhkifipn17q415dbx"; depends=[fastcluster ggplot2 igraph Rcpp]; }; + propr = derive2 { name="propr"; version="3.1.4"; sha256="1hggj926zphhg6v09bbrv77rp11bg6vciy3xfnkqi2hakjw3ak59"; depends=[fastcluster ggplot2 igraph Rcpp]; }; prospectr = derive2 { name="prospectr"; version="0.1.3"; sha256="18lh03xg6bgzsdsl56bjd63xdp16sqgr3s326sgifkkak8ffbv7q"; depends=[foreach iterators Rcpp RcppArmadillo]; }; protViz = derive2 { name="protViz"; version="0.2.45"; sha256="0mvq0p0lnxwpia1znyizha5gdj6f9i07nghp3gv9kfficlq3fw03"; depends=[Rcpp]; }; proteomicdesign = derive2 { name="proteomicdesign"; version="2.0"; sha256="01s47pgwxy4xx10f3qmbfv59gbaj0qw017kpkpsn33s8w7ad63r0"; depends=[MASS]; }; @@ -9361,10 +9552,11 @@ in with self; { prototest = derive2 { name="prototest"; version="1.1"; sha256="0v65abrn73wgwnrrf6gv9f7p0qy12xlk9ishq9lq4qal1wlsrrjs"; depends=[glmnet intervals MASS Rcpp RcppArmadillo]; }; protr = derive2 { name="protr"; version="1.5-0"; sha256="1mi14hph6cqdsgjw4p00miaa4bh2axkwfcmxaiv7f7v4dk8i52y1"; depends=[]; }; proustr = derive2 { name="proustr"; version="0.2.1"; sha256="17syaxfrwm9kh5q825hj7bsrvi4h9avpdabw9y0vq20y87w8cq1s"; depends=[assertthat dplyr magrittr purrr rlang SnowballC stringr tidyr tokenizers]; }; - provenance = derive2 { name="provenance"; version="1.8"; sha256="0mf1bdpi6hp4djy63zknnnz68g50sr68p40yzz3q3lqvjgj2akqj"; depends=[MASS]; }; - proxy = derive2 { name="proxy"; version="0.4-19"; sha256="0ladwgi70jw2a3adgg2xadw8hz3mm6llsw428c1fcrl305sy49vb"; depends=[]; }; + provenance = derive2 { name="provenance"; version="1.9"; sha256="1d40k85cxnnxy480ylvy6wwswgf8hbxgcbansx90hyg9cb3rvhil"; depends=[MASS]; }; + proxy = derive2 { name="proxy"; version="0.4-21"; sha256="1vih8gsfzv97h5c8ixd1qjnn02i7fzla2p9fdj2wpisqhx0p0xv0"; depends=[]; }; prozor = derive2 { name="prozor"; version="0.2.3"; sha256="1686lfmzmzl1488xnppv95hfr83gf67xfzqsw49gdas0aba3plhh"; depends=[AhoCorasickTrie doParallel foreach Matrix plyr seqinr stringr]; }; - pryr = derive2 { name="pryr"; version="0.1.3"; sha256="1b1rcywq9sqzgjsnh3ynnx16gp41n94kkzfalm3y4kyy3ls8ikba"; depends=[codetools Rcpp stringr]; }; + prrd = derive2 { name="prrd"; version="0.0.2"; sha256="0ifs55yqvwbcs3xyc90yi763fgavdhajk1ba73g1kchn2ak39qhb"; depends=[config crayon data_table DBI liteq RSQLite]; }; + pryr = derive2 { name="pryr"; version="0.1.4"; sha256="06vj5xl9x37kbd3l5bw7sbgfdnp37spvrjrn976rxi04clqk966k"; depends=[codetools Rcpp stringr]; }; psData = derive2 { name="psData"; version="0.2.2"; sha256="013hb6lk9rm2w08m5jbw90ndrcd4wyy2h125jx07c9bs60wh4mp4"; depends=[countrycode DataCombine reshape2 rio xlsx]; }; psbcGroup = derive2 { name="psbcGroup"; version="1.4"; sha256="0l1hmgw4sislryws8hv7r2nglhcs6g9khg0372a70djvhz2l6gfi"; depends=[LearnBayes mvtnorm SuppDists]; }; pscl = derive2 { name="pscl"; version="1.5.2"; sha256="1phf3awsfr4ncqfqzin5m1pz0g7y1zhbcm2sz7358ssw914fd7rc"; depends=[MASS]; }; @@ -9374,7 +9566,6 @@ in with self; { pse = derive2 { name="pse"; version="0.4.7"; sha256="0kigfzsvx3gw7jwym4f19dydwwarwxgmha7hpy54gg0zzi4k9icl"; depends=[boot Hmisc]; }; pseudo = derive2 { name="pseudo"; version="1.4.3"; sha256="0ccf3gz2g7g5y4acpj2qnb39hrghhdganizlddg6rx7al869fffs"; depends=[geepack KMsurv]; }; pseval = derive2 { name="pseval"; version="1.3.0"; sha256="1iv3fa7ar9i7v9j5axbasmn8l8nvry4zvmb7fd8aql82f22szmbj"; depends=[survival]; }; - psgp = derive2 { name="psgp"; version="0.3-6"; sha256="0h9gyadfy0djj32pgwhg8vy2gfn7i7yj5nnsm6pvfypc3k71s2wf"; depends=[automap gstat intamap Rcpp RcppArmadillo]; }; psidR = derive2 { name="psidR"; version="1.4"; sha256="1whdjsab5cihlq4gp06xafl3zg7z0cjb4622d23v24igz7kr0ic2"; depends=[data_table foreign RCurl SAScii]; }; pso = derive2 { name="pso"; version="1.0.3"; sha256="0alar695c6kc1rsvwipsrvlxc93f3sy9l0yhp0mggyqgxkkvy406"; depends=[]; }; psoptim = derive2 { name="psoptim"; version="1.0"; sha256="1yziabkd3h05cfl5jy5l8ji2y3w21acvxsq3inxyh0iwyr8qdkkl"; depends=[]; }; @@ -9384,8 +9575,8 @@ in with self; { pstest = derive2 { name="pstest"; version="0.1.1"; sha256="0k8413ilpbz23v210wz80mli7ajpc8p7y4pbn1za371qw04b81c5"; depends=[harvestr]; }; psy = derive2 { name="psy"; version="1.1"; sha256="027whr670w65pf8f7x0vfk9wmadl6nn2idyi6z971069lf01wdlk"; depends=[]; }; psych = derive2 { name="psych"; version="1.7.8"; sha256="0daismb8pdk392vdy304hqx0m3jx62gx3a0hygjygc125rhfla7k"; depends=[foreign lattice mnormt nlme]; }; - psychmeta = derive2 { name="psychmeta"; version="0.1.2"; sha256="117qw86iz3k3vpxvmsabw3m0y53rpbl9xxr0qwl7zlqfylyf0mhz"; depends=[boot dplyr ggplot2 MASS metafor nor1mix reshape2 tibble tmvtnorm]; }; - psycho = derive2 { name="psycho"; version="0.0.2"; sha256="0673zfscqfkj1pjhnibmp1wgpigw6vd4zva5vmsgix62wk9456f4"; depends=[corrplot dplyr ggplot2 lmerTest MuMIn ppcor psych purrr rstanarm rtf tidyr tidyverse]; }; + psychmeta = derive2 { name="psychmeta"; version="0.2.3"; sha256="0lfgsbvb1dplwbxfqim3q7lnf4sclngdik1l5cxl9rkdwb54lcy6"; depends=[boot dplyr fungible ggplot2 MASS metafor nor1mix progress reshape2 rtf tibble tidyr tmvtnorm]; }; + psycho = derive2 { name="psycho"; version="0.1.0"; sha256="0qfgq5sivr01jiglaykh3jqjz11zag8si1nmw0ffr28bp94gibrg"; depends=[dplyr ggcorrplot ggplot2 lmerTest MASS MuMIn nFactors ppcor psych purrr qgraph rstanarm stringr tidyr]; }; psychometric = derive2 { name="psychometric"; version="2.2"; sha256="1b7cx6icixh8k3bv60fqxjjks23qn09vlcimqfv2x3m3nkf8p1s9"; depends=[multilevel nlme]; }; psychomix = derive2 { name="psychomix"; version="1.1-4"; sha256="15yk3z11w4bzk6vljr13bkfhzycypww6blc1djb5iwl635xq1c49"; depends=[flexmix Formula lattice modeltools psychotools]; }; psychotools = derive2 { name="psychotools"; version="0.4-2"; sha256="04p5yb39c8j28q6brqsrw0dr1zvgpyzb7008v2kk3d5sncgl4dd0"; depends=[]; }; @@ -9398,10 +9589,9 @@ in with self; { ptw = derive2 { name="ptw"; version="1.9-12"; sha256="111b0s66p7fk6z6bnm3wckpfjxr1gshv0rqqy5wy6qg60hp7bcfd"; depends=[nloptr]; }; ptwikiwords = derive2 { name="ptwikiwords"; version="0.0.3"; sha256="129dad1vy52sf97dqrkwa49vjhv2kvs4pmd5zvq8pxd51hqm6wy9"; depends=[]; }; ptycho = derive2 { name="ptycho"; version="1.1-4"; sha256="1llk3rpk0lf80vwvs23d6dqhgyic3a6sfjc393csj69hh01nrdvc"; depends=[coda plyr reshape2]; }; + pubh = derive2 { name="pubh"; version="0.1.7"; sha256="0dha3adlbrxgkamlb5i2lcnqcsspqb30fmj0f2zhz0bh4i83lznb"; depends=[bookdown car descr Epi epiR epitools gee lattice latticeExtra lme4 lmtest MASS multcomp nlme nnet ordinal pander papeR rmdformats sandwich survival visreg]; }; pubmed_mineR = derive2 { name="pubmed.mineR"; version="1.0.11"; sha256="01b4dd28x3a25d0s8k0dwbcr6asaqh2b9c4fddg683i54q483lkd"; depends=[boot R2HTML RCurl XML]; }; - pubprint = derive2 { name="pubprint"; version="0.2.1"; sha256="0lcav93i4lw0j491q8ga47iyski2kvmqvppq0jwa3144zfb3hnic"; depends=[stringr]; }; pullword = derive2 { name="pullword"; version="0.2"; sha256="14rln0nbd4k2cvf18iwvc56776b9g3m3cs67i7fgzabfrgj8y6db"; depends=[RCurl]; }; - pulsar = derive2 { name="pulsar"; version="0.2.5"; sha256="1qmyhj32dygnvqvjysvlhlxv9y8lyfnm8hzaycmh8g3lhymk2k9c"; depends=[Matrix]; }; pulver = derive2 { name="pulver"; version="0.1.1"; sha256="0zj3a66hjing4a87lvhxlvdp72kpn0s2d6r5kc0pi06ls04r8sax"; depends=[DatABEL Rcpp]; }; pumilioR = derive2 { name="pumilioR"; version="1.3.1"; sha256="1791r5lkr6hafd2rz9f9nfy5vc03c4833f292khvd2cg43sb0bfc"; depends=[RCurl XML]; }; purge = derive2 { name="purge"; version="0.2.1"; sha256="1faf8mkaxsnj63wnig5rs50hd3j6vzaj0xkdz8kn0j7y2vvshp9p"; depends=[]; }; @@ -9416,6 +9606,7 @@ in with self; { pwr = derive2 { name="pwr"; version="1.2-1"; sha256="0k3jzx7jjgzha3vkpknj9nvx4yqlc9rq0mw25shvzi0xbr1y2cdb"; depends=[]; }; pwr2 = derive2 { name="pwr2"; version="1.0"; sha256="0zfv7z5yymw310r1sqm8ivsc2pv6dgk2k4b1axmm92gsaj53cn7p"; depends=[]; }; pwrAB = derive2 { name="pwrAB"; version="0.1.0"; sha256="0ifyw40m9gsijw3vm9qb8qk4yydmdixfdpdp45x2hk93j8v61jm1"; depends=[]; }; + pwrFDR = derive2 { name="pwrFDR"; version="1.85"; sha256="1al8dh5h32lipnqfa823wwx7nsrz8z3fadl7hz4qvj8vpfijpz1i"; depends=[]; }; pwrRasch = derive2 { name="pwrRasch"; version="0.1-2"; sha256="13fr4yfk8aky1vv36pllx673l4lg9q7i661vbyn2zabyizd2rw3b"; depends=[]; }; pwt = derive2 { name="pwt"; version="7.1-1"; sha256="0926viwmwldmzlzbnjfijh00wrhgb0h4h0mlrls71pi5pjfldifa"; depends=[]; }; pwt8 = derive2 { name="pwt8"; version="8.1-1"; sha256="1iig0x90ilzh3hdki0h33qgrra8r94rw4bk1x8y7i6c1may8y0v6"; depends=[]; }; @@ -9424,6 +9615,7 @@ in with self; { pxweb = derive2 { name="pxweb"; version="0.6.3"; sha256="106nb0a3v295cam8ixhdwpgjhwq8p71c2z5c49s6xnqwmf6rbd0h"; depends=[data_table httr plyr RJSONIO stringr]; }; pycno = derive2 { name="pycno"; version="1.2"; sha256="0ha5css95xb98dq6qk98gnp1al32gy6w5fkz74255vs4hmkwfzw2"; depends=[maptools rgeos sp]; }; pyramid = derive2 { name="pyramid"; version="1.4"; sha256="0hh0hmckicl0r2r9zlf693j65jr9jgmiz643j2asp57nbs99lgxz"; depends=[]; }; + qCBA = derive2 { name="qCBA"; version="0.3.1"; sha256="0lr97hig9c4l9k7vjalvgar4f1dic1lqf91li4q63j07lgdyvh4c"; depends=[arc arules rJava]; }; qGaussian = derive2 { name="qGaussian"; version="0.1.6"; sha256="0j8n4y4yzidkp52db73zv2snx0kwpg3aiz7vr82ybq3x9scy8c4n"; depends=[Rcpp robustbase zipfR]; }; qLearn = derive2 { name="qLearn"; version="1.0"; sha256="1ilxmgazm8gjz8c1hhbp4fccibnvnalxrag8b0rn081zsqmhf094"; depends=[]; }; qPCR_CT = derive2 { name="qPCR.CT"; version="1.1"; sha256="19j41fsd2m7p2nxi2h2mj43rjxx6sz2jpf4sk0bfvl1gyj0iz3hi"; depends=[RColorBrewer]; }; @@ -9431,6 +9623,7 @@ in with self; { qap = derive2 { name="qap"; version="0.1-1"; sha256="0d2d1ni1camixyi45lfy00f4pn3p063k7bsi8gj5scp6n15mdgb0"; depends=[]; }; qat = derive2 { name="qat"; version="0.74"; sha256="04n1jnbkf9dzafjh1n5d4q9p7hvyhnr63nmgl51jqxcf3nan5rlx"; depends=[boot fields gdata gplots moments ncdf4 XML]; }; qboxplot = derive2 { name="qboxplot"; version="0.2"; sha256="07f05n7zxgwyxg2r5fz691ra64m218w9v874xfzjx6671c40y1q2"; depends=[]; }; + qcQpcr = derive2 { name="qcQpcr"; version="1.5"; sha256="1298zla8z5w9z4idc07v3ca9rc1afx853y7iz3jmqnqnv8mr0s48"; depends=[ggplot2]; }; qcc = derive2 { name="qcc"; version="2.7"; sha256="0lc26w7p3d023lfr8v6v75m2vwqg9vi9pdipap19l4vbdq29l4zz"; depends=[MASS]; }; qclust = derive2 { name="qclust"; version="1.0"; sha256="0cxkk4lybpawyqmy5j6kkpgm0zy0gyn3brc1mf9jv8gmkl941cp3"; depends=[mclust mvtnorm]; }; qcr = derive2 { name="qcr"; version="1.0"; sha256="1251naica44kccmikyzdi3ncxfmvyqbc4qspfqnc0w54cqpsy5rw"; depends=[fda_usc MASS mvtnorm qcc qualityTools]; }; @@ -9445,10 +9638,10 @@ in with self; { qgtools = derive2 { name="qgtools"; version="1.0"; sha256="0irqfaj2qqx7n1jfc0kmfpgzqrhwwlj0qizsmya94zk9d27bcpn5"; depends=[MASS Matrix]; }; qha = derive2 { name="qha"; version="0.0.8"; sha256="0sdf6g6884wn73i237xkwszg2mq8xddhvyy225qzpplh5za4pnhl"; depends=[ade4 FactoClass FactoMineR]; }; qicharts = derive2 { name="qicharts"; version="0.5.5"; sha256="0bl1f64b5n8q9jhzh3rqfyh9613qiy9mhcy2xsn16jyrj4hmj0jd"; depends=[ggplot2 lattice latticeExtra scales]; }; - qicharts2 = derive2 { name="qicharts2"; version="0.2.0"; sha256="0z0qw62zqaarmf19yx1h9knlgkh7n8qa913fwns7s62izy944rph"; depends=[dplyr ggplot2 scales]; }; + qicharts2 = derive2 { name="qicharts2"; version="0.3.0"; sha256="0z9ym2pzl1psqp67hd69vmq729xzdhr9lcrxk2dv387547xhf3h1"; depends=[dplyr ggplot2 scales]; }; qiimer = derive2 { name="qiimer"; version="0.9.4"; sha256="0argspi9pin2gjsg0qkl28hj3bw8svfab1cy410zlq76qdnmg7df"; depends=[pheatmap]; }; qiitr = derive2 { name="qiitr"; version="0.1.0"; sha256="1p0mcwgzvbib20l05wrnshkqx99vwr69dgy15dfwp75skyy5l797"; depends=[httr jsonlite purrr rstudioapi]; }; - qlcData = derive2 { name="qlcData"; version="0.1.0"; sha256="00xfr7dywvadyhs2z32za06fzdzmm20sn31grin0b3xw5qndai0f"; depends=[stringi yaml]; }; + qlcData = derive2 { name="qlcData"; version="0.2.1"; sha256="0n1r7462zmyzkyi7mp3hf7pn7bgw1m1zs9flm3n199kjm8f6yyzy"; depends=[ape data_tree docopt phytools shiny stringi yaml]; }; qlcMatrix = derive2 { name="qlcMatrix"; version="0.9.5"; sha256="0fm49iydbjp264h9mkk8qfblbvg4l3bfcnphxyhcv3n27m0w44sf"; depends=[Matrix slam]; }; qlcVisualize = derive2 { name="qlcVisualize"; version="0.1.0"; sha256="13rc4z7rz7vngrkxq09flhszvcbg6i7drdkdp8kmvgcxf0im6lv0"; depends=[alphahull fields mapdata mapplots maps maptools MASS qlcMatrix raster seriation sp spatstat]; }; qle = derive2 { name="qle"; version="0.16-6"; sha256="1gah72vv7zfaxl2i9r58qzpkml7pkspxffd7jaf9z93izrzcsp74"; depends=[digest expm lhs mvtnorm nloptr]; }; @@ -9457,7 +9650,7 @@ in with self; { qmrparser = derive2 { name="qmrparser"; version="0.1.5"; sha256="0sl9n42j0dx9jqz5vv029ra6dyrg9v7mvdlya8ps3vyd6fjhwh0z"; depends=[]; }; qpcR = derive2 { name="qpcR"; version="1.4-0"; sha256="029qhncfiicb3picay5yd42g6qi0x981r6mgd67vdx71cac9fp59"; depends=[MASS Matrix minpack_lm rgl robustbase]; }; qqman = derive2 { name="qqman"; version="0.1.4"; sha256="1v9s9ag1hfb47py87wb2nad4mbsfx35832hdmrh5kxrb2f11zl1s"; depends=[calibrate]; }; - qqplotr = derive2 { name="qqplotr"; version="0.0.1"; sha256="0npvl90gqw1graa8bvn0nijvj1klcr7vnsl8d8samanj3af8z7vb"; depends=[dplyr ggplot2 robustbase]; }; + qqplotr = derive2 { name="qqplotr"; version="0.0.2"; sha256="1cfzs77labxsfqq3flqz40gihyaz4bsi9vhsx6qqgpl6v4iz0a2h"; depends=[dplyr ggplot2 knitr MASS robustbase]; }; qqtest = derive2 { name="qqtest"; version="1.1.1"; sha256="08vfpbrgvyhv1w0gqmys9zkhfxh85sk74ig5fn12ma2p87zv7r5l"; depends=[robust]; }; qqvases = derive2 { name="qqvases"; version="1.0.0"; sha256="1fli4v1slmnwcmzmmfw84sa4mx3xzv3im1q0plb8811sbsgmwdvl"; depends=[shiny shinythemes]; }; qrLMM = derive2 { name="qrLMM"; version="1.3"; sha256="1k85d09yvhx3pgmvqrsmhd14hqaah4pdr87vp4kg60dp9w5sydjz"; depends=[ald ghyp matrixcalc mvtnorm psych quantreg]; }; @@ -9471,13 +9664,13 @@ in with self; { qrjoint = derive2 { name="qrjoint"; version="1.0-0"; sha256="18jmxb5wv16gy4vf0cgp4x885s53i3z3qmc46bdr4md513mc980w"; depends=[coda kernlab Matrix quantreg]; }; qrmdata = derive2 { name="qrmdata"; version="2016-01-03-1"; sha256="192dcsmvl3xbzlk658cfp2sk5fkgbjhjd4g1mrcs8s63hmzbwdzc"; depends=[xts]; }; qrmix = derive2 { name="qrmix"; version="0.9.0"; sha256="1r695d9bmmngvblh9jj0rnjymdaln9w0jywz51wla0bdssssf845"; depends=[MASS quantreg]; }; - qrmtools = derive2 { name="qrmtools"; version="0.0-7"; sha256="0c624jsdf6ypnip8z0hsdvrby29cdd9gpyp19asprdwsrmymmy6h"; depends=[lattice Quandl quantmod rugarch xts zoo]; }; + qrmtools = derive2 { name="qrmtools"; version="0.0-8"; sha256="111rhfaj2hwh2267y3y20wh9dxp0fj2m68j0hv4rmdslm2xwfjzq"; depends=[lattice Quandl quantmod rugarch xts zoo]; }; qrng = derive2 { name="qrng"; version="0.0-3"; sha256="0xdhmcqvgjmrf4c72x76yz5kp0jiysy8q6f67lix1h4mvzr4q2qd"; depends=[]; }; - qrnn = derive2 { name="qrnn"; version="1.1.3"; sha256="0phbazi47pzhvg7k3az958rk5dv7nk2wvbxqsanppxsvyxl0ykwf"; depends=[]; }; + qrnn = derive2 { name="qrnn"; version="2.0.2"; sha256="0w4gzignkfrx220fk9j4by0ibr4r9s66il0f43k6abf0czvqdxx4"; depends=[]; }; qrsvm = derive2 { name="qrsvm"; version="0.2.1"; sha256="0qpj3c8qwrwr2asvp921av0mbdba1ayz0pdq4a52i1waqng4fgis"; depends=[doParallel foreach kernlab Matrix quadprog]; }; qtbase = derive2 { name="qtbase"; version="1.0.12"; sha256="0j3nzmh4xj0mzwlh9dsc3296yqbkhzn6qhzb8ismhi0bmx5hjydj"; depends=[]; }; qte = derive2 { name="qte"; version="1.2.0"; sha256="1l911z52v3jp0b2agvwfny8d4yq0llrdp873j4mw696x50awj8py"; depends=[BMisc formula_tools ggplot2 Hmisc quantreg texreg]; }; - qtl = derive2 { name="qtl"; version="1.41-6"; sha256="067az4v432zxp6lxck8d7vlh9w4r13r0mvw5zsglyaqwsh3d9sad"; depends=[]; }; + qtl = derive2 { name="qtl"; version="1.42-8"; sha256="1l528dwvfpdlr05imrrm4rq32axp6hld9nqm6mm43kn5n7z2f5k6"; depends=[]; }; qtlDesign = derive2 { name="qtlDesign"; version="0.941"; sha256="138yi85i5xiaqrns4v2hw46b731bdgnb301wg2h4cfrxvrw4l0d5"; depends=[]; }; qtlbook = derive2 { name="qtlbook"; version="0.18-6"; sha256="0kbz7icp6fzl2bgk50fcg8x704aijpz3xbqrzraj7qa3z8gakaj6"; depends=[qtl]; }; qtlc = derive2 { name="qtlc"; version="1.0"; sha256="17ij4alx4qg556b5kq7qsjygj5jf8iyx1f0v52pvx1z2sm6nppww"; depends=[plot3D rgl tiff]; }; @@ -9486,36 +9679,36 @@ in with self; { qtlmt = derive2 { name="qtlmt"; version="0.1-6"; sha256="023h60z8d05832l2g7mg776hfjb0i7xpvhz3i899rc3h5pgjd94c"; depends=[]; }; qtlnet = derive2 { name="qtlnet"; version="1.3.6"; sha256="044a2p3mpp203kb85s2fr3qiyypm461lrzxkfi0hnzq44qqba169"; depends=[graph igraph pcalg qtl sem]; }; qtpaint = derive2 { name="qtpaint"; version="0.9.1"; sha256="08x7qcxwkaclwv1p4s9a5k95x35hzp69whiihkakjv5blm83m3g9"; depends=[qtbase]; }; - qtutils = derive2 { name="qtutils"; version="0.1-3"; sha256="018k9v3mab1mfcjh4mv1a1iish50fwdhb51mqn17k6fyrrrv7vs5"; depends=[qtbase]; }; quad = derive2 { name="quad"; version="1.0"; sha256="0fak12l19f260k0ygh6zimx8dabzsv7a9i2njw8hnfcs3ndffhv5"; depends=[PearsonDS]; }; quadmesh = derive2 { name="quadmesh"; version="0.1.0"; sha256="1k1midhszmi843krv9sdwbyhjmffgps0xx9aigkp7yw7mpif07vx"; depends=[dplyr raster]; }; quadprog = derive2 { name="quadprog"; version="1.5-5"; sha256="0jg3r6abmhp8r9vkbhpx9ldjfw6vyl1m4c5vwlyjhk1mi03656fr"; depends=[]; }; - quadprogXT = derive2 { name="quadprogXT"; version="0.0.1"; sha256="0q1yph4hri04i4k8rw5zpm60yc0irrb8nvxf0vipzd2chn4d9k6f"; depends=[quadprog]; }; + quadprogXT = derive2 { name="quadprogXT"; version="0.0.2"; sha256="1yqcxpzahrmlyz1rsp3fgs1dsjf7y7lhp98ybpmlgpj6c9z2abcl"; depends=[quadprog]; }; quadrupen = derive2 { name="quadrupen"; version="0.2-5"; sha256="193hn3yf6c5i3p4n8gpg78nvsf2jdlcw40mm4p2ffxk7xzmv8xvl"; depends=[ggplot2 Matrix Rcpp RcppArmadillo reshape2 scales]; }; qualCI = derive2 { name="qualCI"; version="0.1"; sha256="09mzsy5ryyrn1gz9ahrh95cpfk7g09pmjjy0m82fh4xc7j5w6kpf"; depends=[combinat]; }; qualV = derive2 { name="qualV"; version="0.3-3"; sha256="1yyqk223ydcc0125gsn33a4mcdp8bd76fpn8kj9bfz9g78b8dqmx"; depends=[KernSmooth]; }; qualityTools = derive2 { name="qualityTools"; version="1.55"; sha256="1c2p78dhwqvzb2k01dvwb41a6hlr2iwpw6fv91036x30rphjzb88"; depends=[MASS Rsolnp]; }; qualpalr = derive2 { name="qualpalr"; version="0.4.2"; sha256="0lgg8r7w2fwd2nw8x3k876pyc9r3igqri57akc5fwi92gb8grj5b"; depends=[assertthat randtoolbox Rcpp RcppArmadillo RcppParallel]; }; - qualtRics = derive2 { name="qualtRics"; version="2.2"; sha256="186x27qf5gic2qz9rrg550h6a8gb89hq4qqsjmc2zz73zsga4xsi"; depends=[assertthat httr jsonlite lubridate sjlabelled stringr yaml]; }; - qualvar = derive2 { name="qualvar"; version="0.1.0"; sha256="07vpq5nyh40y1sq1fsg97z7bbardqakq6bx635v42pv00480h9sh"; depends=[]; }; + qualtRics = derive2 { name="qualtRics"; version="3.0"; sha256="1cd49jvk04gx278v74yc93f4jni7k30v0anz95mz98x4y3xr45nd"; depends=[assertthat dplyr httr jsonlite readr rlang sjlabelled stringr yaml]; }; + qualvar = derive2 { name="qualvar"; version="0.2.0"; sha256="1c7b7lcyq2l46sslk185r6xfh5fb35z9qihrhnh294sw1k52bffa"; depends=[]; }; quantable = derive2 { name="quantable"; version="0.2.2"; sha256="179bqqrga8mpigchfmhf11sc75frhd9nd6yqclz85lnd6gl16yd7"; depends=[caret e1071 gplots Matrix pROC RColorBrewer scales]; }; quantchem = derive2 { name="quantchem"; version="0.13"; sha256="1ga5xa7lsk04flfp1syjzpnvj3i2ypzh1m49vq1xkdwpm6axdy8n"; depends=[MASS outliers]; }; - quanteda = derive2 { name="quanteda"; version="0.99.22"; sha256="0dwrhw7j0nc25jidn62ihs01nqg5190msa9qpwvphfbmanfk36n6"; depends=[data_table fastmatch ggplot2 lubridate magrittr Matrix Rcpp RcppArmadillo RcppParallel RSpectra SnowballC spacyr stringi wordcloud XML yaml]; }; + quanteda = derive2 { name="quanteda"; version="1.0.0"; sha256="099bwlfz3g7nyn59js9bkmvxq7yl13i8p89a54piz4xzqasy7xx3"; depends=[data_table digest extrafont fastmatch ggplot2 ggrepel lubridate magrittr Matrix network Rcpp RcppArmadillo RcppParallel RSpectra sna SnowballC spacyr stopwords stringi wordcloud XML yaml]; }; quantification = derive2 { name="quantification"; version="0.2.0"; sha256="116cp88q9cmizxc2a8lsysa1vwyp1y86457fx5qkq5dcm4g721g8"; depends=[car]; }; quantileDA = derive2 { name="quantileDA"; version="1.1"; sha256="0jbklxsy33j7clcw97qq4ijwkrb94v2m11gjcfa38vplfxm9913q"; depends=[]; }; - quantmod = derive2 { name="quantmod"; version="0.4-11"; sha256="0h4w94xdzfvh0rrgsiqj2q9wa7pw9sspn3dbbwvir94lc6b74dn7"; depends=[curl TTR xts zoo]; }; - quantoptr = derive2 { name="quantoptr"; version="0.1.2"; sha256="1hvr69ng8z7qhw3w0by95v6sckcismx8d5s69k2949rfg79z3dmh"; depends=[quantreg Rdpack rgenoud stringr]; }; - quantreg = derive2 { name="quantreg"; version="5.34"; sha256="0bmgfgnmzqwmwwaraliry682yb8kcr396q3rlzrd2qzaa9sgxxh4"; depends=[Matrix MatrixModels SparseM]; }; + quantmod = derive2 { name="quantmod"; version="0.4-12"; sha256="0y7gh0k1s10vdsfch8777avbhf99mc9crikvx7ahqrw0j631vmhq"; depends=[curl TTR xts zoo]; }; + quantoptr = derive2 { name="quantoptr"; version="0.1.3"; sha256="0f9vy9yhya4wpya8n345s6n7a5sb29chdkl5fz6dwa31lp1mvvj3"; depends=[quantreg Rdpack rgenoud stringr]; }; + quantreg = derive2 { name="quantreg"; version="5.35"; sha256="18f3qxv1j1bqmq55hzssz8mnp5ww4flhy80rm2v1rk0mmg9paz7m"; depends=[Matrix MatrixModels SparseM]; }; quantreg_nonpar = derive2 { name="quantreg.nonpar"; version="1.0"; sha256="1f9120awnkwsgdiqg98lg7xs5l4y80930869x6k9q76595r5m92k"; depends=[fda mnormt quantreg Rearrangement]; }; - quantregForest = derive2 { name="quantregForest"; version="1.3-6"; sha256="0s24pic04pjd0093w4d3ijjbmhhxbd0m3vl139jwqq4hfslz1hws"; depends=[randomForest RColorBrewer]; }; + quantregForest = derive2 { name="quantregForest"; version="1.3-7"; sha256="0lk7r02i6zpx9sdl2rp0r7fc3a84s8qhg49nh2x7k3vxwa095pjz"; depends=[randomForest RColorBrewer]; }; quantregGrowth = derive2 { name="quantregGrowth"; version="0.3-2"; sha256="1ga3qn8g7r465dlxl8wmvz1vlpq5639kmawancsgkm77f316wpzf"; depends=[quantreg]; }; + quantregRanger = derive2 { name="quantregRanger"; version="1.0"; sha256="1a9q2prr790bpw6s0y5ni5ppd3vqkjr0v4nqp6ywcj5n3sk69pvx"; depends=[ranger Rcpp]; }; quantspec = derive2 { name="quantspec"; version="1.2-1"; sha256="0kvwifdwy3big0lls5h3wcb48v3jvlfp1l0zjd07jnvj43zj3ysd"; depends=[abind quantreg Rcpp snowfall zoo]; }; quarrint = derive2 { name="quarrint"; version="1.0.0"; sha256="13fdmmrgn23xd9vpywmcl7pf729gmcxjfl1wxs30axsbp4h1s6rk"; depends=[neuralnet]; }; questionr = derive2 { name="questionr"; version="0.6.2"; sha256="0mjgwm6xm753r6bjlz79c9vp7xxkb69hiv3mlzrm50slh34x7jhx"; depends=[classInt highr htmltools labelled miniUI rstudioapi shiny]; }; queuecomputer = derive2 { name="queuecomputer"; version="0.8.2"; sha256="0zpyi4hqhsy2jlbf2ygfl25wh3m166ifp9yw4h4ycd1pga9bj43n"; depends=[dplyr Rcpp RcppArmadillo tidyr]; }; queueing = derive2 { name="queueing"; version="0.2.11"; sha256="1rgavpivvxwww1qiphbjm25d1avhjcjv31imsrzrkwh1d12b2k7x"; depends=[]; }; quhomology = derive2 { name="quhomology"; version="1.1.0"; sha256="0acglmjp4x8f81iysxp8x7v5279p8gdidj308b9spn6xbmqgbr8z"; depends=[MASS numbers]; }; - quickPlot = derive2 { name="quickPlot"; version="0.1.2"; sha256="0wxab03y5dydcrsr0pr7zkfv5aa7yl7v6bin9977iakbnzjqlscd"; depends=[data_table ggplot2 gridBase igraph raster RColorBrewer rgdal sp]; }; + quickPlot = derive2 { name="quickPlot"; version="0.1.3"; sha256="091d81x5kbjs4hawrdlvkp6ylmcsjg4xqs47hk2nrv5im2nl8i7z"; depends=[data_table ggplot2 gridBase igraph raster RColorBrewer rgdal sp]; }; quickReg = derive2 { name="quickReg"; version="1.5.0"; sha256="1l1v3k8albxlaz18l2b2x2ryifq4pbdq6n4q7555hnfcik9rqmw5"; depends=[dplyr ggplot2 nortest psych rlang survival]; }; quickblock = derive2 { name="quickblock"; version="0.1.0"; sha256="15zv7znhq3rl5jkdy0jyxr0h2mkpxir04vvl2hw57c5mn79izcpr"; depends=[distances scclust]; }; quickmapr = derive2 { name="quickmapr"; version="0.2.0"; sha256="1hxcq4h1rgdmypn3kgmwppzhacyspcj7iv2sy7s2xx5y69x62hf1"; depends=[httr raster rgdal rgeos sp]; }; @@ -9525,26 +9718,26 @@ in with self; { quint = derive2 { name="quint"; version="1.2.1"; sha256="1d9dnrjnl9cg2yn5snr6x9qr6lf74639j3ymsxpw0wn5c4fm8z46"; depends=[Formula partykit rpart]; }; quipu = derive2 { name="quipu"; version="1.9.0"; sha256="1py1qpbwp2smr5di8b3zmzxxhchfmr5qfhqkdiqig28mcnqcmp5n"; depends=[agricolae pixmap shiny stringr xtable]; }; quokar = derive2 { name="quokar"; version="0.1.0"; sha256="1qnl3x1aa665xpyb3ac07xrnnjdwbmj645p103144k5is5b8likc"; depends=[ald ALDqr bayesQR dplyr ggplot2 GIGrvg gridExtra knitr magrittr MCMCpack purrr quantreg robustbase tidyr]; }; - quotedargs = derive2 { name="quotedargs"; version="0.1.0"; sha256="1wnzcywrahcf2wwxnwqfxbfmrhzlq2ghfzbhs10gj9nsbbp1l0ch"; depends=[]; }; - qut = derive2 { name="qut"; version="1.2"; sha256="1w6zsjphzfb1gby21cq20j8cclj15xklwga821sj07x3nchgn421"; depends=[flare glmnet lars Matrix]; }; + quotedargs = derive2 { name="quotedargs"; version="0.1.1"; sha256="05y3jgix3aix3d4nazd7h9c27mfcl52xl6fdpfpi7zyd4iznpv9g"; depends=[]; }; + qut = derive2 { name="qut"; version="2.0"; sha256="1r0yg99p88ar1d9qhayzpplssjpsy901b7n6yr7r4n9nldh8p7xz"; depends=[flare glmnet lars Matrix]; }; qvcalc = derive2 { name="qvcalc"; version="0.9-1"; sha256="1ll71yww8rsbp0qa60w7vdna8yk60cq66cjn5cdk3bkdwyni28yy"; depends=[]; }; qwraps2 = derive2 { name="qwraps2"; version="0.2.4"; sha256="18ail1y3kpiiwgkf7zn1acfz1ipz7wbk8pcmlganayr8p9yv7sh2"; depends=[dplyr ggplot2 knitr Rcpp tidyr]; }; r_jive = derive2 { name="r.jive"; version="2.1"; sha256="0l0bhhp6bdc84pzxi7gnsxx3scycw0zahrnc496wx3j43np9hlsg"; depends=[abind gplots SpatioTemporal]; }; r2d2 = derive2 { name="r2d2"; version="1.0-0"; sha256="1zl0b36kx49ymfks8rm33hh0z460y3cz6189zqaf0kblg3a32nsi"; depends=[KernSmooth MASS sp]; }; r2dRue = derive2 { name="r2dRue"; version="1.0.4"; sha256="1apdq7zj5fhs349wm9g6y06nn33x24pg3gdp4z1frd18qlacf8z5"; depends=[matrixStats rgdal sp]; }; r2glmm = derive2 { name="r2glmm"; version="0.1.2"; sha256="0iim92blpa59vgz97c2pi05yhbjjmaffdbkbmk5kplfb2vmazgiy"; depends=[afex data_table dplyr ggplot2 gridExtra lmerTest MASS Matrix mgcv pbkrtest]; }; - r2lh = derive2 { name="r2lh"; version="0.7"; sha256="1kkyjv9x2klrjnaaw4a16sxdfqmpp9s5mlclzlczlqjypbf2aa6d"; depends=[]; }; r2stl = derive2 { name="r2stl"; version="1.0.0"; sha256="18lvnxr40cm450s8qh09c3cnkl1hg83jhmv1gzsv6nkjrq4mj5wh"; depends=[]; }; r4ss = derive2 { name="r4ss"; version="1.24.0"; sha256="1kifzfg2zx6lq2c8qqbhb096z1wgdayhg5qzx5hnkwpn05w5cma3"; depends=[coda corpcor gplots gtools maps pso truncnorm]; }; + r6extended = derive2 { name="r6extended"; version="0.1.1"; sha256="184c3jh84vihbwg81c2wv3ndaddki8cpas3wgvqk2akyq168rnfc"; depends=[digest hellno magrittr R6]; }; rARPACK = derive2 { name="rARPACK"; version="0.11-0"; sha256="12h2y46xcfldhjdmm960swgn9b23zvkj5vg2bi42s9qxwgi02d63"; depends=[RSpectra]; }; rAltmetric = derive2 { name="rAltmetric"; version="0.7.0"; sha256="1vbvjv273vg3pi30vxxa2bivlajfsbqrzflk3payp6ym9myi27mg"; depends=[httr jsonlite rlist]; }; - rAmCharts = derive2 { name="rAmCharts"; version="2.1.5"; sha256="1lvcws288dxw6j3xjxd3rfr4k1izvnq8ykpmh02v4fqh4hzhqgwn"; depends=[data_table htmltools htmlwidgets knitr pipeR yaml zoo]; }; + rAmCharts = derive2 { name="rAmCharts"; version="2.1.6"; sha256="00bc05jjyaky71pdic455cs6anqf0gm7563vwwxxzqnrm8lknrag"; depends=[data_table htmltools htmlwidgets knitr pipeR yaml zoo]; }; rAverage = derive2 { name="rAverage"; version="0.5-8"; sha256="09yap3qv02k5nidi6a4png9xa5yy7cb8hg8s2dq99wnc88s42d26"; depends=[]; }; rAvis = derive2 { name="rAvis"; version="0.1.4"; sha256="0svplnrn8rrr59v04nr1pz7d5r4dr1kdl0bd3kg8c3azxv47mxbp"; depends=[gdata maptools raster RCurl rgdal scales scrapeR sp stringr XML]; }; rBayesianOptimization = derive2 { name="rBayesianOptimization"; version="1.1.0"; sha256="194j445nirvvkz880ax0zw2q1mkiy0khdfjl7bwiwj8knhhvkrhw"; depends=[data_table foreach GPfit magrittr]; }; rBeta2009 = derive2 { name="rBeta2009"; version="1.0"; sha256="0ljzxlndn9ba36lh7s3k4biim2qkh2mw9c0kj22a507qbzw1vgnq"; depends=[]; }; rCAT = derive2 { name="rCAT"; version="0.1.5"; sha256="03nbhcfgawz0a8h5fr51aqn1n9v7kprwvafxzjb2pb8751rica2d"; depends=[pracma rgdal sp]; }; - rCBA = derive2 { name="rCBA"; version="0.0.1"; sha256="0mfd4jn5bcn4kqnfmycm5x7kcvll60dp1nma3l1bfj0v2hybxm5d"; depends=[arules rJava]; }; + rCBA = derive2 { name="rCBA"; version="0.3.0"; sha256="1jsykb747clzd5j78h50gclf7171hk015yssi02lbai79q359r56"; depends=[arules R_utils rJava TunePareto]; }; rCMA = derive2 { name="rCMA"; version="1.1"; sha256="0dswshg80hbgcib5x9w791sh71q5s4435q8sm9dh170v4ngbax0w"; depends=[]; }; rCUR = derive2 { name="rCUR"; version="1.3"; sha256="1f38xbc5n91k2y88cg0sv1z2p4g5vl7v2k1024f42f7526g2p2lx"; depends=[lattice MASS Matrix]; }; rCarto = derive2 { name="rCarto"; version="0.8"; sha256="08813l4xfahjyn0jv48q8f6sy402n78dqsg01192pxl2dfc2i9ry"; depends=[classInt maptools RColorBrewer]; }; @@ -9554,21 +9747,20 @@ in with self; { rDNAse = derive2 { name="rDNAse"; version="1.1-1"; sha256="0cl51q61kwvdsm5f49cjjbzggqam1fnr6gp15cmy6m2yahyxg1lk"; depends=[]; }; rDVR = derive2 { name="rDVR"; version="0.1.1"; sha256="19a4f9k65bd49vkn3sxkjdmcpwyawk7gwmvancvqr745gfgs0wzg"; depends=[RCurl]; }; rDotNet = derive2 { name="rDotNet"; version="0.9.1"; sha256="18cd5373pdfi1x958llb4cgjqdi1fb7h7m5nkdwcd4xw9hxhinzd"; depends=[Rcpp testthat]; }; - rEDM = derive2 { name="rEDM"; version="0.6.5"; sha256="19ci7kqqpf2b206kmyaq1rxs8qd39svd2ckdf2gfgm26183zxl0k"; depends=[Rcpp RcppEigen]; }; + rEDM = derive2 { name="rEDM"; version="0.6.9"; sha256="0825yh82vlkmjkrwbk7xfhdq4c7yq7n4bmmw6x7ywmhbnayqj6b3"; depends=[Rcpp RcppEigen]; }; rEMM = derive2 { name="rEMM"; version="1.0-11"; sha256="0ynjn10gcmxs8qnh6idb34ppmki91l8sl720x70xkzcqpahy0nic"; depends=[cluster clusterGeneration igraph MASS proxy]; }; - rENA = derive2 { name="rENA"; version="0.1.0"; sha256="0zipfsalfdp4ldnn8ivgxlfbdg9k3577lplqc42wy9w2bclfrixp"; depends=[data_table data_tree doParallel foreach magrittr plotly R6 Rcpp RcppArmadillo RcppEigen RcppParallel RcppRoll scales]; }; + rENA = derive2 { name="rENA"; version="0.1.3"; sha256="03sb6fb6d41nf4qd7ifsbr3gqgdk9g5lvjcxvdqhldxrhwn4b1ji"; depends=[data_table data_tree doParallel foreach magrittr plotly R6 Rcpp RcppArmadillo RcppEigen RcppParallel RcppRoll scales]; }; rFDSN = derive2 { name="rFDSN"; version="0.0.0"; sha256="1ffiqpdzy4ipy2aci22zkih4373ifkjkpvsrza8awhyf9fwqwdsl"; depends=[XML]; }; - rFSA = derive2 { name="rFSA"; version="0.1.0"; sha256="14drlivamb818dgh808h6j81ww1zlwil42whpclz7ayfddna5rg4"; depends=[]; }; + rFSA = derive2 { name="rFSA"; version="0.9.1"; sha256="14qpxmzy4vy1fydn8yqh1001mqrgv1i67ai42w61dkk0d4m75z60"; depends=[hashmap tibble]; }; rFTRLProximal = derive2 { name="rFTRLProximal"; version="1.0.0"; sha256="1458gqy2zbaa62vaimawdr1nk0lsgwz1j4pgw21fkw7bskcszz0f"; depends=[data_table FeatureHashing foreach magrittr Matrix Rcpp RcppArmadillo RcppProgress]; }; rFerns = derive2 { name="rFerns"; version="2.0.3"; sha256="02lq43mgcz8n21hwb0pjqi0aq5dacnaakpx336q1xzw1kwlvfkhv"; depends=[]; }; - rForest = derive2 { name="rForest"; version="0.1"; sha256="1y7gqa1333nvllngy821k655glxkb9p6rbnx9cns7dy0qdqjzx50"; depends=[alphashape3d geometry rgl sp]; }; rGammaGamma = derive2 { name="rGammaGamma"; version="1.0.12"; sha256="1051ah6q11qkxj1my4xybbzc8xcqkxfmps8mv2his5cyfllwidbs"; depends=[gsl]; }; rGoodData = derive2 { name="rGoodData"; version="0.1.1"; sha256="092sgy6y3dkyr32hrir4jvjwh7n6gfvv9z7i631fipg59255g0zy"; depends=[data_table httr jsonlite]; }; - rGroovy = derive2 { name="rGroovy"; version="1.0"; sha256="03kyw1hv1xmv580cf47gb3fzvjp27j0a93604h5hap981pzibdpy"; depends=[rJava]; }; + rGroovy = derive2 { name="rGroovy"; version="1.2"; sha256="0wx17d4c7202dbmgw4nvnvw42fiwlzsl151idrmm4fzfff8y1vdi"; depends=[rJava]; }; rHealthDataGov = derive2 { name="rHealthDataGov"; version="1.0.1"; sha256="0lkjprss15yl6n9wgh79r4clip3jndly2ab1lv4iijzxnxay099d"; depends=[bit64 httr jsonlite]; }; rHpcc = derive2 { name="rHpcc"; version="1.0"; sha256="0096z90mmf1j2xpb9034a5ph52m8z6n6xjh3km2vrhw63g3cpwap"; depends=[RCurl XML]; }; rIsing = derive2 { name="rIsing"; version="0.1.0"; sha256="1208lwfk9j8gghj8xf6i8v6s18h89ydqsd4jq3r88n403yzbzzck"; depends=[data_table Rcpp RcppEigen]; }; - rJPSGCS = derive2 { name="rJPSGCS"; version="0.2-7"; sha256="1j8lc56q20b0qkl20r8mqa6q822rpfphj00dlmj50rgwk02pfc69"; depends=[chopsticks rJava]; }; + rJPSGCS = derive2 { name="rJPSGCS"; version="0.2-8"; sha256="0maws52n4lj2byfyv8fj8npk2qyd3dzy83x5h2s1nmgbjm2m36kj"; depends=[chopsticks rJava]; }; rJava = derive2 { name="rJava"; version="0.9-9"; sha256="0ilibvhxydnh9yhhi9h9isgkq41xvwj43b5m9dhnsm2w5cziaawk"; depends=[]; }; rJython = derive2 { name="rJython"; version="0.0-4"; sha256="13fpcw37cca738v9idqgi3gv9avfkfwfacxj54p2c4wyg46ghnah"; depends=[rJava rjson]; }; rKIN = derive2 { name="rKIN"; version="0.1"; sha256="1j6fdi5h869q4d1hq6ha6qyhisa0zk2qmhjrc4ahl9991d680dyn"; depends=[ggplot2 maptools MASS rgeos sp]; }; @@ -9577,23 +9769,23 @@ in with self; { rLakeAnalyzer = derive2 { name="rLakeAnalyzer"; version="1.11.0"; sha256="0y6ir41yl8xj19lbwlvzcrfcrdk9cn9i4q4z1pg7mwj4cq6bc6gd"; depends=[plyr]; }; rLiDAR = derive2 { name="rLiDAR"; version="0.1.1"; sha256="1w0yi4ygw0l9ydbllqjylp30d401bsf7b6fng6qg3pssbi9v3kln"; depends=[bitops deldir geometry plyr raster rgl sp spatstat]; }; rLindo = derive2 { name="rLindo"; version="8.0.1"; sha256="05qyc4wvpjgw8jxmwn2nwybi695fjn0cdilkprwmjg07c82f0q5n"; depends=[]; }; - rMR = derive2 { name="rMR"; version="1.0.5"; sha256="18p2z2njb6j8pj7i1mdwl91qynwqmszy8pck02bdynzdag47wl6r"; depends=[biglm]; }; + rMR = derive2 { name="rMR"; version="1.1.0"; sha256="0da1hclfnnlkp9by6zf2p079643p8nimplr9p3ipbjdy739j344z"; depends=[biglm]; }; rMouse = derive2 { name="rMouse"; version="0.1"; sha256="0pzxasap5kwxqq36mb4zi139jllsl4vk06dw2pv9xnwdxiszr3gp"; depends=[rJava]; }; rNMF = derive2 { name="rNMF"; version="0.5.0"; sha256="1nz6h0j5ywdh48m0swmhp34hbkycd7n13rclrxaw85qi9wc42597"; depends=[knitr nnls]; }; - rNOMADS = derive2 { name="rNOMADS"; version="2.3.8"; sha256="0qgw839ivxaznyjbd1v3w9jfrcx3srs4jp04lq9v82ibvr859a2v"; depends=[fields GEOmap MBA RCurl rvest scrapeR stringr XML xml2]; }; + rNOMADS = derive2 { name="rNOMADS"; version="2.3.9"; sha256="15l6150vsaa7y2wv896mhdbakxdsg87fx74bbj0rsn0757jss525"; depends=[fields GEOmap MBA RCurl rvest scrapeR stringr XML xml2]; }; rODE = derive2 { name="rODE"; version="0.99.6"; sha256="0l518ghfw6283kckqcbh45a35vd73njy05v3dwghhhjdj7v3km8b"; depends=[data_table]; }; + rPackedBar = derive2 { name="rPackedBar"; version="0.1.0"; sha256="12jwkch3264m6ksl8rdjirwdzm1g8b4050mm6rysw9v57k3v57ji"; depends=[data_table plotly scales]; }; rPowerSampleSize = derive2 { name="rPowerSampleSize"; version="1.0.1"; sha256="0yk61ck2br81cd40yvqxrzi9s680ii26wbl0wjdam04dyf0vh1cv"; depends=[mvtnorm ssanv]; }; rPraat = derive2 { name="rPraat"; version="1.0.8"; sha256="06f97sa43i0b4x8j48higgx5jyj5q73j6mf2730yfm4db6ahz94m"; depends=[dplyr dygraphs readr stringr]; }; rPref = derive2 { name="rPref"; version="1.2"; sha256="19b6rycz73rz3nxymb52gfddqsxprkxazwa8pb75vckk13q1cmj0"; depends=[dplyr igraph lazyeval Rcpp RcppParallel]; }; rPython = derive2 { name="rPython"; version="0.0-6"; sha256="1aw9jn45mw891cskr51yil60i55xv5x6akjvfdsbb9nwgdwwrqdp"; depends=[RJSONIO]; }; rRAP = derive2 { name="rRAP"; version="1.1"; sha256="1nzvs8bjkbjraa33azxf9mrxsxh87qhh3qlldrcs5y4fq4ancyqb"; depends=[lars lassoshooting MASS]; }; rSARP = derive2 { name="rSARP"; version="1.0.0"; sha256="0gg6qs7jgn2qvzdwbz0xyfpfzjwa2dwi0j0hal7glc5qlhrrynwl"; depends=[ggplot2 lattice qcc]; }; - rSCA = derive2 { name="rSCA"; version="2.1"; sha256="1lpix8xsjzyhgksmigvqxpv2bvaka0b1q2kcvdyfrfcw713n19rw"; depends=[]; }; + rSCA = derive2 { name="rSCA"; version="3.0"; sha256="1ka8p1slqb3a9hfc8z4j7v90k0wn6y35vmwxqaf8jlgwfhhc1v9f"; depends=[]; }; rSFA = derive2 { name="rSFA"; version="1.04"; sha256="0gd6ji1ynbb04rfv8jfdmp7dqnyz8pxcl5636fypd9a81fggl0gs"; depends=[MASS]; }; - rSPACE = derive2 { name="rSPACE"; version="1.2.0"; sha256="1nmv8niqc34mipzhny1mlwc9v4kck02ixmm1i25cqdfhsng03dma"; depends=[ggplot2 plyr raster RMark sp tcltk2]; }; - rSQM = derive2 { name="rSQM"; version="1.2.42"; sha256="0s4ncvrhxnpnxmrilsx6y57s00nc859b9czh08i6na1z31354cpj"; depends=[dplyr EcoHydRology ggplot2 gsubfn mise ncdf4 qmap reshape2 stringr yaml zoo]; }; + rSQM = derive2 { name="rSQM"; version="1.3.14"; sha256="0m69n2pnfv2085dln6p149a5gw0gif9xk00xmad5s9j68hwjdmym"; depends=[dplyr EcoHydRology ggplot2 gsubfn mise ncdf4 qmap reshape2 stringr yaml zoo]; }; rSymPy = derive2 { name="rSymPy"; version="0.2-1.1"; sha256="1mrfpyalrq8b6yicy28jsj0xy7hlawa72imsfhabwd3hrx6ld150"; depends=[rJython]; }; - rTableICC = derive2 { name="rTableICC"; version="1.0.4"; sha256="0if18is64m3ka2dxfbj7vb1lbwwhn2hgfh3kdh7d47nr3z4ak7p0"; depends=[aster partitions]; }; + rTableICC = derive2 { name="rTableICC"; version="1.0.6"; sha256="1wasfkcnbd2azv2v0n02932zxa86lxrvndny2821lvf7xrc9yy55"; depends=[aster partitions]; }; rTensor = derive2 { name="rTensor"; version="1.3"; sha256="0ra34sn4g92r6asrn4la2wbsi2y0hnyx163wwi4v0j6f57bslhdw"; depends=[]; }; rUnemploymentData = derive2 { name="rUnemploymentData"; version="1.1.0"; sha256="0p5hba8iv060szp23s05hvpmwan518ykakm6vqzdcki0inxw0hyv"; depends=[choroplethr rvest stringr]; }; rWBclimate = derive2 { name="rWBclimate"; version="0.1.3"; sha256="0vs56hx7a85pw4jx8nb8bdlr9dbkl4zdhzhqsm0505xc3qz18vxh"; depends=[ggplot2 httr jsonlite plyr reshape2 rgdal sp]; }; @@ -9610,19 +9802,18 @@ in with self; { radiant_design = derive2 { name="radiant.design"; version="0.8.0"; sha256="0n2a0jpjcxxmmr9sbky7v2cnzil3hv6b20yzkyc9lf4a48pqlm4l"; depends=[AlgDesign dplyr mvtnorm polycor r_import radiant_data shiny]; }; radiant_model = derive2 { name="radiant.model"; version="0.8.0"; sha256="0zlb5ny3s15d1ngdhszkn5wzij4y5fz7c2lwkb9g619pr0ngrwr8"; depends=[car data_tree DiagrammeR dplyr e1071 ggplot2 gridExtra lubridate magrittr NeuralNetTools nnet pryr psych r_import radiant_basics radiant_data rpart sandwich shiny stringr tidyr yaml]; }; radiant_multivariate = derive2 { name="radiant.multivariate"; version="0.8.0"; sha256="0l3rk5045apjb2jx04jf3mwjixg8cjwrgmz83km9627n93cabs2l"; depends=[car dplyr ggplot2 Gmedian GPArotation gridExtra magrittr MASS pryr psych r_import radiant_data radiant_model scales shiny wordcloud]; }; - radiomics = derive2 { name="radiomics"; version="0.1.2"; sha256="1l9ribgyk0wgr7cy4fh7qp0hwzxcmkir9r2zwb0ha3rqqggd3xj7"; depends=[Rcpp reshape2 spatstat]; }; radir = derive2 { name="radir"; version="1.0.2"; sha256="09lcq8ax5x5yk3sqx15rvw3vyi8fyfzgs76kxjhf7hcw4qnib46d"; depends=[hermite]; }; radmixture = derive2 { name="radmixture"; version="0.0.1"; sha256="0rs60xjd43lg5c9972qhpg6bsqfg2578qvrz7gz3bdip10jb1ryj"; depends=[magrittr MCMCpack plyr quadprog]; }; rafalib = derive2 { name="rafalib"; version="1.0.0"; sha256="1dmxjl66bfdgrybhwyaa8d4i460liqcdw8b29a6w7shgksh29m0k"; depends=[RColorBrewer]; }; rags2ridges = derive2 { name="rags2ridges"; version="2.2"; sha256="04f9gvwpgrx54dgbjjixlxa2056aqcz2kryn4jplwf5fc0vj1lyn"; depends=[expm fdrtool ggplot2 graph gRbase Hmisc igraph RBGL Rcpp RcppArmadillo reshape sfsmisc snowfall]; }; ragt2ridges = derive2 { name="ragt2ridges"; version="0.3.1"; sha256="0zjqrvy1k1lz4caakcj3c6l2j637wp6nxbzfj0gvcn2c4pjcrdyp"; depends=[abind expm fdrtool igraph MASS Matrix mvtnorm rags2ridges Rcpp RcppArmadillo]; }; ragtop = derive2 { name="ragtop"; version="0.5"; sha256="0h09h9ws9c2d9xc00w4hl000h0kbvq16lz4vgv1w93am8zmsp4wm"; depends=[futile_logger limSolve]; }; - railtrails = derive2 { name="railtrails"; version="0.0.1"; sha256="1vfpl1cjscgyq1ip6s8f3bsvijnrc8gqzkckb3229d0bya8swc9f"; depends=[tibble]; }; + railtrails = derive2 { name="railtrails"; version="0.0.3"; sha256="0dbyqviig0sadialqr66x93v3xn8y4qgdb323mji7rasdp5w8ws4"; depends=[tibble]; }; rainbow = derive2 { name="rainbow"; version="3.4"; sha256="09vxdb4j099grnlx10995b74r3h9g1vs8div3nywgnslaj8x7pay"; depends=[cluster colorspace hdrcde ks MASS pcaPP]; }; raincpc = derive2 { name="raincpc"; version="0.4"; sha256="0yzpyidvf24frf82pj7rarjh0ncm5dhm0mmpsf2ycqlvp0qld10i"; depends=[SDMTools]; }; rainfreq = derive2 { name="rainfreq"; version="0.3"; sha256="0985ck2bglg22gfj7m0hc7kpk0apljsbssf1ci99mgk47yi8fk9v"; depends=[RCurl SDMTools]; }; rakeR = derive2 { name="rakeR"; version="0.2.1"; sha256="0cd89q6k0y9z1qk9k06iw56lhj4c52ckr0g4qv6q95lkyrbi3qg8"; depends=[ipfp wrswoR]; }; - ramchoice = derive2 { name="ramchoice"; version="0.1"; sha256="1iagimgwjh8ksf6ssjrhnnm0dkn23xqdzzjavzyx5jm4xj1307h1"; depends=[MASS]; }; + ramchoice = derive2 { name="ramchoice"; version="0.2"; sha256="0br6n6mxcz099rj3dh1sp28wy9g5rqwh0arg0s968pc5h0jfbai5"; depends=[MASS]; }; ramcmc = derive2 { name="ramcmc"; version="0.1.0"; sha256="0s5jgjqkschr64srblppv9lbvhynlpfiy8cy12fywpmnbv8viazq"; depends=[Rcpp RcppArmadillo]; }; ramidst = derive2 { name="ramidst"; version="0.1.0"; sha256="1q4lvq2c2vj9xrm2p2w2qjsl4qvwcl6y54y68mmbd6cw7wqpffjj"; depends=[rJava]; }; ramify = derive2 { name="ramify"; version="0.3.3"; sha256="0cxmkxhshg0vrcxai2gbm4iih04f44liv5nh5jiq85hjz8qbhdi2"; depends=[]; }; @@ -9639,25 +9830,26 @@ in with self; { randomForestExplainer = derive2 { name="randomForestExplainer"; version="0.9"; sha256="0gqqm3784krl6xdx7j6xvvyi2rjbyi6c8shm44yvq59is5i7fypc"; depends=[data_table dplyr DT dtplyr GGally ggplot2 ggrepel MASS randomForest reshape2 rmarkdown]; }; randomForestSRC = derive2 { name="randomForestSRC"; version="2.5.1"; sha256="1p5a5z7ddhnsrln8vpdrwvxbgknwdigczjw8vpxzbkckmf6qfidd"; depends=[]; }; randomGLM = derive2 { name="randomGLM"; version="1.02-1"; sha256="031338zxy6vqak8ibl2as0l37pa6qndln0g3i9gi4s6cvbdw3xrv"; depends=[doParallel foreach MASS]; }; - randomLCA = derive2 { name="randomLCA"; version="1.0-13"; sha256="09pnpzf6zgqbjklyc3w1ff0k6vy8gjl42gdd1xb63rv2kqw1yvgk"; depends=[boot fastGHQuad lattice Matrix]; }; + randomLCA = derive2 { name="randomLCA"; version="1.0-15"; sha256="10rx2ah50dcjxz5y492c59d3pn0dvlgjaxfdf8sknkf6s4pmwkis"; depends=[boot fastGHQuad lattice Matrix]; }; randomNames = derive2 { name="randomNames"; version="1.0-0.0"; sha256="12q5bs65qivddiaxbsp128j94h2vyrgjvmm80d52r36ffbaigl09"; depends=[data_table]; }; randomUniformForest = derive2 { name="randomUniformForest"; version="1.1.5"; sha256="1amr3m7h5xcb8gahrr58233chsnx1naf9x5vpjy9p5ivh71xcxf7"; depends=[cluster doParallel foreach ggplot2 gtools iterators MASS pROC Rcpp]; }; - randomcoloR = derive2 { name="randomcoloR"; version="1.0.0"; sha256="15qgfzwc2cli2gjwzj1pf4h16qciiinihd9ib6ph74jbkpimyh11"; depends=[colorspace stringr V8]; }; + randomcoloR = derive2 { name="randomcoloR"; version="1.1.0"; sha256="0sirxgrf7xf470d7lls45c698l6c078hqjkjcswmwz6kphykrzhg"; depends=[cluster colorspace Rtsne scales stringr V8]; }; randomizationInference = derive2 { name="randomizationInference"; version="1.0.3"; sha256="0x36r9bjmpx90fz47cha4hbas4b31mpnbd8ziw2wld4580jkd6mk"; depends=[matrixStats permute]; }; randomizeBE = derive2 { name="randomizeBE"; version="0.3-3"; sha256="0vdvgk2b1h1lsj0ka01lwldfxanngir91axc8ywa6pg12hrdkkb0"; depends=[]; }; randomizeR = derive2 { name="randomizeR"; version="1.4"; sha256="0l7gvpm52fwbz79vgy7vn4z2n4gqigimdj6r9drm3lfzbylmx3js"; depends=[ggplot2 plotrix]; }; - randomizr = derive2 { name="randomizr"; version="0.6.0"; sha256="1hkazj25ipvrdcy9845lgqvnncw3ilrxrhzvh5lm865rk8z0i2cg"; depends=[]; }; + randomizr = derive2 { name="randomizr"; version="0.8.0"; sha256="0yrjw3q8ivimbir6m3adw22mwq2ka0vpyrsrkvvn05bm5x5mffvs"; depends=[]; }; randstr = derive2 { name="randstr"; version="0.2.0"; sha256="17593lbk6r089yasafd21i3v90ya9n92rflpzl0qicd2kqqk2gdh"; depends=[random stringi truncnorm]; }; randtests = derive2 { name="randtests"; version="1.0"; sha256="03z3kxl4x0l91dsv65ld9kgc58z82ld1f4lk18i18dpvwcgkqk82"; depends=[]; }; - randtoolbox = derive2 { name="randtoolbox"; version="1.17"; sha256="107kckva43xpqncak8ll4h0mjm8lcks4jpf7dffgw5ggcc77ycrb"; depends=[rngWELL]; }; + randtoolbox = derive2 { name="randtoolbox"; version="1.17.1"; sha256="13akf13qi4yhj9gapym05074b1qzk03vgysy81qsd73pd8r107ls"; depends=[rngWELL]; }; rangeBuilder = derive2 { name="rangeBuilder"; version="1.4"; sha256="1jjy1d3kljysm3mqgdszdi6incbmg2di63akxswfaiqcp1m68a6y"; depends=[alphahull cleangeo pbapply raster Rcpp rgdal rgeos sp stringi]; }; rangeMapper = derive2 { name="rangeMapper"; version="0.3-1"; sha256="005r97zwz0czsp543h1g3zrys00s6wdyk0ji9pk7jn625i02cbdk"; depends=[classInt data_table foreach ggplot2 gridExtra lattice magrittr maptools raster RColorBrewer rgdal rgeos RSQLite sp]; }; rangemodelR = derive2 { name="rangemodelR"; version="1.0.1"; sha256="04zv8a4nhin9masvbw1cmbwdkls4wgq81xfw6kg0wdh1hpqjz1z0"; depends=[]; }; - ranger = derive2 { name="ranger"; version="0.8.0"; sha256="1fdbm879wx3hlng8s4c4f8f2x5yxz57llakcqnpa0lymybidw3vz"; depends=[Matrix Rcpp RcppEigen]; }; + ranger = derive2 { name="ranger"; version="0.9.0"; sha256="1pilj5pxl8jl0gsy9vsyqxqdqfcxzvphbgvrlp4hf7r9mrfw9v0p"; depends=[Matrix Rcpp RcppEigen]; }; rankFD = derive2 { name="rankFD"; version="0.0.1"; sha256="1zb9gxvsmv46mpw5znskhfjxnwkr59hdixcly6i3r78yaqgca0dz"; depends=[coin lattice MASS Matrix]; }; rankdist = derive2 { name="rankdist"; version="1.1.2"; sha256="1nr9nr5nfziia6jykk598hm5ngkfr6yx5mypq34iyfm24877gd3q"; depends=[hash optimx permute Rcpp]; }; rankhazard = derive2 { name="rankhazard"; version="1.1.0"; sha256="0kljn9b74alrd22b5pwfnamdbaqi2wa2z6yzpmgpfs3x0hv72fw7"; depends=[survival]; }; rapiclient = derive2 { name="rapiclient"; version="0.1.2"; sha256="072rlr7z9rj4agkzmy12cz4axh4pajavfd83lpcx2b1lgxpj6ck4"; depends=[httr jsonlite]; }; + rapidraker = derive2 { name="rapidraker"; version="0.1.0"; sha256="17jzkzm5hvd8vcqql40bwl89sfgz8yicvi0753nzgkmbvanzjhjx"; depends=[openNLPdata rJava slowraker]; }; rappdirs = derive2 { name="rappdirs"; version="0.3.1"; sha256="0ji6sg3bdn5gazkq14xmmcq7jnbsyxw4lzmmbgv6526j2vn93n1g"; depends=[]; }; rapport = derive2 { name="rapport"; version="1.0"; sha256="1i1zawar5yxw23km74mrvaxnc9hr06kqjvbm046c09cqi6pw0hjh"; depends=[pander rapportools stringr yaml]; }; rapportools = derive2 { name="rapportools"; version="1.0"; sha256="1sgv4sc737i12arh5dc3263kjsz3dzg06qihfmrqyax94mv2d01b"; depends=[pander plyr reshape]; }; @@ -9671,16 +9863,17 @@ in with self; { rasterImage = derive2 { name="rasterImage"; version="0.3.0"; sha256="0csx7wqwxdsddypd1c9wv74gcyymasn9n6pn05a35j6xhqbk2zp3"; depends=[plotrix]; }; rasterKernelEstimates = derive2 { name="rasterKernelEstimates"; version="1.0.1"; sha256="1733ic1hxym3gyibk2ysy5zzq7s9rbf6jx63x7irnrcavq151f8s"; depends=[raster]; }; rasterList = derive2 { name="rasterList"; version="0.5.8"; sha256="0q7apglxzpah04463z07cpkzyd6l6dbbdhm601brzh6yk75z20vh"; depends=[raster]; }; - rasterVis = derive2 { name="rasterVis"; version="0.41"; sha256="0dsg8ypsxxa7qagy5yjcyqyjqqyy7xgfbmiijr3xbn2n1wp090n9"; depends=[hexbin lattice latticeExtra raster RColorBrewer sp viridisLite zoo]; }; + rasterVis = derive2 { name="rasterVis"; version="0.43"; sha256="0g6ij4h5di4c0pzv7ghc63jfl3j3rm1g541apbjr6n4k9ci12k4l"; depends=[hexbin lattice latticeExtra raster RColorBrewer sp viridisLite zoo]; }; ratelimitr = derive2 { name="ratelimitr"; version="0.3.9"; sha256="0w6i9czcbj8ipd9nn4w4h4pqk6xd8anh00cn60hss9hs18fcb21d"; depends=[assertthat]; }; rateratio_test = derive2 { name="rateratio.test"; version="1.0-2"; sha256="1a2v12z2dr893ha80fhada1820z5ih53w4pnsss9r9xw3hi0m6k5"; depends=[]; }; raters = derive2 { name="raters"; version="2.0.1"; sha256="16jnx6vv39k4niqkdlj4yhqx8qbrdi99bwzxjahsxr12ab5npbp1"; depends=[]; }; - ratesci = derive2 { name="ratesci"; version="0.2-0"; sha256="0gviaiia2jih6xx1maf9ajizmgh4vdbca4r17h9m817v3xn21y7b"; depends=[]; }; + ratesci = derive2 { name="ratesci"; version="0.3-0"; sha256="1mdx47xpgjrjbb3lybajdmxb87dqr6cvv3fsvwfx0n629mjbih4z"; depends=[]; }; rationalfun = derive2 { name="rationalfun"; version="0.1-0"; sha256="15949vs9pdjz7426zhgqn7y87xzn79ikrpa2vyjnsid1igpyh0mp"; depends=[polynom]; }; - ratios = derive2 { name="ratios"; version="1.1.0"; sha256="1nss6xfkm5axp8mld1aiqaygrmrwl2jn9k2476la2j3pla047xgm"; depends=[data_table stringr]; }; + ratios = derive2 { name="ratios"; version="1.2.0"; sha256="16q9v2lhgklvdp3hi9x3afdldznfpwg775p80m2g5074q2dzjpgg"; depends=[data_table stringr]; }; rattle = derive2 { name="rattle"; version="5.1.0"; sha256="0xxf2wpazsk29y2byyk010n59vmzmhm4phpsqvklmsr1v3m10pvp"; depends=[cairoDevice dplyr ggplot2 magrittr RGtk2 rpart_plot stringi stringr tidyr XML]; }; rattle_data = derive2 { name="rattle.data"; version="1.0.2"; sha256="0cnmyzvy23jc4vz521c3jg0w4165waycvy5014l5773fy19zq75c"; depends=[]; }; raw = derive2 { name="raw"; version="0.1.5"; sha256="0w0k35izvsi8vwp38har4ygh1zxnz7hfla8d8fcbvckpfbkwpggp"; depends=[]; }; + rbacon = derive2 { name="rbacon"; version="2.3.2"; sha256="1bzqrgqw3dbkyz7pl3lk2g83w31i09msqd063b411y9c61cx98ik"; depends=[coda Rcpp]; }; rbamtools = derive2 { name="rbamtools"; version="2.16.6"; sha256="1sb18qx68fnj1d598lw8fkqnxp3c5s704g6cnhwy299gppj3xg1d"; depends=[refGenome]; }; rbcb = derive2 { name="rbcb"; version="0.1.2"; sha256="01jbjjnkic8jiy0361b1pnin9d5ssxfnf33k8fc95fw8k02j300k"; depends=[httr jsonlite tibble xml2 xts]; }; rbefdata = derive2 { name="rbefdata"; version="0.3.5"; sha256="12mcqz0pqgwfw5fmma0gwddj4zk0hpwmrsb74dvzqvgcvpfjnv98"; depends=[RColorBrewer RCurl rjson rtematres wordcloud XML]; }; @@ -9700,7 +9893,7 @@ in with self; { rbvs = derive2 { name="rbvs"; version="1.0.2"; sha256="1wzxz2ca8f1phhbqr9p7c8sk09cyrdq5jc45g4ddrqvi2q29k28y"; depends=[]; }; rcanvec = derive2 { name="rcanvec"; version="0.2.1"; sha256="0gsk2cfiysxjw2lrnpl2l524lvhh9nhnyyh79n8p7vykyqj711yn"; depends=[rgdal sp]; }; rcarbon = derive2 { name="rcarbon"; version="1.0.0"; sha256="0xgf26m8cw3g4nc4s413xgplxv8a6s2m4m7g3zavsjl3517b86bc"; depends=[doParallel foreach sp]; }; - rcartocolor = derive2 { name="rcartocolor"; version="0.0.21"; sha256="0a01cxn5vk6a1bqpyhahyf3m7f51p62cm4xgah78km51cywx8d2v"; depends=[ggplot2 scales]; }; + rcartocolor = derive2 { name="rcartocolor"; version="0.0.22"; sha256="1dh1n01v70sfmymg1w0f272j6nwnrzawqx5x4ljgh46pzqprx56r"; depends=[ggplot2 scales]; }; rcbalance = derive2 { name="rcbalance"; version="1.8.5"; sha256="15qlk3cqwsvixl17l1fxcajrabmz4y7q5gz0a1pd66f6i1xskcqq"; depends=[MASS plyr]; }; rcbsubset = derive2 { name="rcbsubset"; version="1.1.3"; sha256="16wd0j0z2ll8hqrk27fss4k9fyjw6xwx30xkrphx9jj2ws08wibl"; depends=[MASS plyr]; }; rcc = derive2 { name="rcc"; version="1.0.0"; sha256="0a77d54c9qahhsjzpa0436ddsj4j44013r7rbxm0fjz04c0d2921"; depends=[]; }; @@ -9712,16 +9905,16 @@ in with self; { rchallenge = derive2 { name="rchallenge"; version="1.3.0"; sha256="1qn2pzch5yk771jsjcsmfsi5vddfb2w50vfqlkmsl6nf5z6sdq9k"; depends=[knitr rmarkdown]; }; rchess = derive2 { name="rchess"; version="0.1"; sha256="0qnvvvwcl02rmqra9m7qnhy40cbavswbq6i0jm47x6njmr1gpfhy"; depends=[assertthat dplyr ggplot2 htmlwidgets plyr R6 V8]; }; rcicr = derive2 { name="rcicr"; version="0.3.4.1"; sha256="1sa13sbhx64cf8szr2811iq4a1asb8d3k0igxw6fbssij2lwbxzp"; depends=[aspace dplyr jpeg matlab scales]; }; - rclimateca = derive2 { name="rclimateca"; version="0.4"; sha256="15jn5dsxznibnxlbz6422vfsb2hc17b90xkifx1imd30h6b8b0gc"; depends=[digest httr lubridate prettymapr reshape2]; }; + rclimateca = derive2 { name="rclimateca"; version="1.0.0"; sha256="1wydh7k7yyi56l3xdprzx4s7425k68a7f53hx9pvr0xmn501l67z"; depends=[digest dplyr hms httr lubridate magrittr mudata2 prettymapr purrr readr reshape2 rlang stringr tibble tidyr]; }; rclipboard = derive2 { name="rclipboard"; version="0.1"; sha256="0qphr3qrp0k2gnzk27bgfiq3ff6b8564gmkrjw1kri1p7ilf71wx"; depends=[shiny]; }; rcmdcheck = derive2 { name="rcmdcheck"; version="1.2.1"; sha256="04gh0drvkikn91i5zmpixhrhyjnsyxwz8k8bx4kgwwrmh1dc7f2s"; depends=[callr clisymbols crayon digest withr]; }; - rcompanion = derive2 { name="rcompanion"; version="1.11.1"; sha256="0k2xbyfxnh7srkpqk6izp8amv5crrycjwm9w5g13jmy9iyb5x6zc"; depends=[boot BSDA coin DescTools EMT hermite lattice lmtest multcompView nortest ordinal plyr RVAideMemoire WRS2]; }; - rcongresso = derive2 { name="rcongresso"; version="0.2.1"; sha256="0vk5af679av5702hv6hxlbm10r79jc9y24sx74hf8z5pp2yh2yhw"; depends=[dplyr httr jsonlite magrittr tibble tidyr]; }; + rcompanion = derive2 { name="rcompanion"; version="1.11.3"; sha256="1wzqqss86z2qggyjwpc41wblw9kkca20mbh6q4dwl4yc7gb4ggaf"; depends=[boot BSDA coin DescTools EMT hermite lattice lmtest multcompView nortest ordinal plyr RVAideMemoire WRS2]; }; + rcongresso = derive2 { name="rcongresso"; version="0.3.2"; sha256="15b7m1z5lr66kwhl8v8k2car4id9ssd0ypz75z259v8c1w0k7xkl"; depends=[dplyr httr jsonlite magrittr tibble tidyr]; }; rcoreoa = derive2 { name="rcoreoa"; version="0.1.0"; sha256="13nfziqxxljnczn3idq3zlc9xkklalfnxbakvhs5bw19jmbd11ba"; depends=[crul jsonlite pdftools]; }; rcorpora = derive2 { name="rcorpora"; version="1.2.0"; sha256="0nxd2arzz2617xxcngvcrrrsky9f1b9zdmpv81zr89y08b3xh9f1"; depends=[jsonlite]; }; rcqp = derive2 { name="rcqp"; version="0.4"; sha256="1jpzp3cs17bwfabzg7jffa3hni867mjw8yxi0igxicrbz56j33jb"; depends=[plyr]; }; rcreds = derive2 { name="rcreds"; version="0.6.6"; sha256="1sdrdgn53kgcdnxfjs8jh0h538vb3b9ixz74lbnp54yp09jpqsri"; depends=[collectArgs digest jsonlite magrittr]; }; - rcrossref = derive2 { name="rcrossref"; version="0.7.0"; sha256="09br2nmb1cz4x57w5vj0ggxyqna5898zxnyrjj4nafkqkwblycl5"; depends=[bibtex crul dplyr jsonlite miniUI plyr R6 shiny stringr xml2]; }; + rcrossref = derive2 { name="rcrossref"; version="0.8.0"; sha256="01k3jpd6awan8r4kc5wjw0did30i2bafzjr8mwaaqv87gni2yiyf"; depends=[bibtex crul dplyr jsonlite miniUI plyr R6 shiny stringr xml2]; }; rcrypt = derive2 { name="rcrypt"; version="0.1.1"; sha256="002r5wr0bmqbj014iz8wacj883j6gqcxc786m6p9a7zdrjpx2pqi"; depends=[]; }; rcss = derive2 { name="rcss"; version="1.2"; sha256="08hiprjcjvc138laqrvlvrmn664b63x829ammzgrwjqcsj4kpmds"; depends=[Rcpp RcppArmadillo rflann]; }; rcure = derive2 { name="rcure"; version="0.1.0"; sha256="1pcdc168bwn0b90xy8sdwrm2yvhj26xj11wm8z84m48sxy56j4v8"; depends=[arm MASS plyr smcure survival]; }; @@ -9731,6 +9924,7 @@ in with self; { rdatamarket = derive2 { name="rdatamarket"; version="0.6.5"; sha256="1y4493cvhcgyg2j5hadx1fzmv2lzwan78jighi2dzyxxzv6pxccn"; depends=[RCurl RJSONIO zoo]; }; rdataretriever = derive2 { name="rdataretriever"; version="1.0.0"; sha256="1a1dbzs1jravbhidv9wcs52qbd6zf7wf26hixpqjwiq8gsq9l5gh"; depends=[]; }; rdd = derive2 { name="rdd"; version="0.57"; sha256="1lpkzcjd18x51wzr4d1prdjfsw5978z6zap65psfs02nszy69nqp"; depends=[AER Formula lmtest sandwich]; }; + rddapp = derive2 { name="rddapp"; version="1.0.0"; sha256="0js2y34k971ydv4nx2g4lr3mnpr3pagdiwqfi9l5431fxxr0pf0n"; depends=[AER Formula lmtest sandwich shiny]; }; rddensity = derive2 { name="rddensity"; version="0.2.2"; sha256="10530il8fxpgcads6yvj09jwanldlpvjgjqcknl2wly4gmwcwjq9"; depends=[ggplot2 lpdensity]; }; rddtools = derive2 { name="rddtools"; version="0.4.0"; sha256="1z9sl9fwsq8zs1ygmnjnh3p6h9hjkikbm4z7cdkxw66y0hxgn96s"; depends=[AER Formula ggplot2 KernSmooth lmtest locpol np rdd sandwich]; }; rdefra = derive2 { name="rdefra"; version="0.3.4"; sha256="05fskap0vvrq08m4gql9gczy04lc3dgxgjcsb57dgp3nng358sf6"; depends=[dplyr httr lubridate rgdal sp tibble xml2]; }; @@ -9740,16 +9934,16 @@ in with self; { rdiversity = derive2 { name="rdiversity"; version="1.0"; sha256="0x6s9028v4xcc54yy4977yqw5mrsbqlrm5b9drj05c64mavhm4sq"; depends=[ape ggplot2 ggthemes phangorn phytools plyr reshape2 tibble tidyr]; }; rdlocrand = derive2 { name="rdlocrand"; version="0.2"; sha256="1jad0b9qqlc88knd92yvjqklilbybp9zpkdq7jx1251m6hivs9sw"; depends=[AER sandwich]; }; rdnb = derive2 { name="rdnb"; version="0.1-1"; sha256="1mg40jad79mk95ndnljvfvyh9rhbxkw7inpg2vbsixf1ywdljri3"; depends=[brew httr xml2]; }; - rdomains = derive2 { name="rdomains"; version="0.1.5"; sha256="0xz6vdci2yxmc2850jlgj7c27cndwvk645kwky0whisg6cbv8wdg"; depends=[aws_alexa curl glmnet Matrix RSelenium urltools virustotal XML]; }; + rdomains = derive2 { name="rdomains"; version="0.1.7"; sha256="1w6jvwzd9lwha4qkf8rhd1g3cpr79fsl4rrmh5chdnbahqg60gh9"; depends=[aws_alexa curl glmnet httr Matrix rlang RSelenium urltools virustotal XML xml2]; }; rdoxygen = derive2 { name="rdoxygen"; version="1.0.0"; sha256="16907969w66xvy62k45rw10qfv4x8z6jkkc6i97vppkgnlvf4d4b"; depends=[devtools]; }; rdpla = derive2 { name="rdpla"; version="0.2.0"; sha256="0d32bp68z1agymcmjwnds4fkblhjrcx8i2q6f5b7sl4kdfdbjchf"; depends=[crul data_table hoardr jsonlite tibble]; }; - rdrobust = derive2 { name="rdrobust"; version="0.98"; sha256="0yyb1mr8hn8ssp8h1ypylyd00mcxkdhxp64kp11hi0j2mzpp5pcy"; depends=[]; }; + rdrobust = derive2 { name="rdrobust"; version="0.99"; sha256="1c9issw0mssswln2mdirwjlaps4ps8q9z1wr4ailr4c2z9klla9p"; depends=[]; }; rdrop2 = derive2 { name="rdrop2"; version="0.8.1"; sha256="1f4ysck58dm40k4wn9nfjaxym0mbgfkm146iidfkz7agmd1x0xyl"; depends=[assertive digest dplyr httr jsonlite magrittr purrr]; }; rdryad = derive2 { name="rdryad"; version="0.3.0"; sha256="18vjq5amaian174ywymsx1px7ckirk36386h66lsq0h87qwnrwj7"; depends=[crul curl oai solrium xml2]; }; rdwd = derive2 { name="rdwd"; version="0.9.0"; sha256="1zqmfrxjrkp0f8d943wlzvr7g0rrnbp3x9klx3syrbkn7jqxz49i"; depends=[berryFunctions pbapply]; }; re2r = derive2 { name="re2r"; version="0.2.0"; sha256="0xv355h4bps4a0picxmi6i15niq4knlail80fp9xvszyn72pm8gq"; depends=[htmlwidgets Rcpp RcppParallel stringi]; }; reGenotyper = derive2 { name="reGenotyper"; version="1.2.0"; sha256="13g4fhj25kdk6wbl1hcabcaxcpv0dj0hj2l502wl1aywk1fvmy8m"; depends=[gplots MatrixEQTL zoo]; }; - reReg = derive2 { name="reReg"; version="1.0-0"; sha256="0xd78frrzykdrdwj39vv5m11s5v3xg9fym200gz7sffw8vjv3z96"; depends=[aftgee BB MASS SQUAREM survival]; }; + reReg = derive2 { name="reReg"; version="1.1-1"; sha256="1pjzh9r7488d39a5s0hkymzxh79zc1kp2ag2cp037v3j65mifbin"; depends=[aftgee BB ggplot2 MASS nleqslv plyr SQUAREM survival]; }; reactR = derive2 { name="reactR"; version="0.1.4"; sha256="12ixd0i9yamvgn5y11vyq627nmr83s3q5xaa9l7sj3mns8x657ap"; depends=[htmltools]; }; read_dbc = derive2 { name="read.dbc"; version="1.0.5"; sha256="1vrvxkcrk3iw5am9rsadxzf0wsr7z2mdpa5wb0v9jbhda710b4yf"; depends=[foreign]; }; readBrukerFlexData = derive2 { name="readBrukerFlexData"; version="1.8.5"; sha256="1qmimfxwh6d7s5qrnnk20i2f9l5j1ci3wpfs3qlmggz69jzf589m"; depends=[]; }; @@ -9779,7 +9973,7 @@ in with self; { rebus_unicode = derive2 { name="rebus.unicode"; version="0.0-2"; sha256="185313wh4zpp6addfdr78pjhxzazlfwgsddwk02zrzblf4iwzjdm"; depends=[rebus_base]; }; recexcavAAR = derive2 { name="recexcavAAR"; version="0.3.0"; sha256="0b91jbgqzkgzvk658ckk639yyz1daa0xql3qgl0kzgqg68d53x20"; depends=[kriging Rcpp]; }; rechonest = derive2 { name="rechonest"; version="1.2"; sha256="0vpff8q5p6in7vjyl62bx3wmksravcg4mpx20qlgy5ia47vyhqp2"; depends=[httr jsonlite RCurl]; }; - recipes = derive2 { name="recipes"; version="0.1.1"; sha256="0id46c7iaf49miw4kxpidsbg3hdywav43n1lh2zd1vg5946bzg04"; depends=[broom ddalpha dimRed dplyr gower ipred lubridate magrittr Matrix purrr RcppRoll rlang tibble tidyselect timeDate]; }; + recipes = derive2 { name="recipes"; version="0.1.2"; sha256="1car3a3mqn87pz049cbgkaayz86970mvkapk6al2k7jjw76306l9"; depends=[broom ddalpha dimRed dplyr gower ipred lubridate magrittr Matrix purrr RcppRoll rlang tibble tidyselect timeDate]; }; recluster = derive2 { name="recluster"; version="2.8"; sha256="05g8k10813zbkgja6gvgscdsjd99q124jx31whncc4awdsgk69s4"; depends=[ape cluster phangorn phytools picante vegan]; }; recmap = derive2 { name="recmap"; version="0.5.24"; sha256="0ijs331f9x6r2qamx5b47x4wblz2pg7k5b7593hdwhiiwzh5c0ly"; depends=[GA Rcpp sp]; }; recoder = derive2 { name="recoder"; version="0.1"; sha256="0wh0lqp7hfd4lx2xnmszv1m932ax87k810aqxdb6liwbmvwqnfgd"; depends=[stringr]; }; @@ -9789,10 +9983,11 @@ in with self; { recommenderlabJester = derive2 { name="recommenderlabJester"; version="0.1-2"; sha256="0kr9xc2gih2myn1a8h8dxxmdhibv1sjwjsvlrj9d5hvd1mgfhks5"; depends=[recommenderlab]; }; reconstructr = derive2 { name="reconstructr"; version="2.0.0"; sha256="1pa6b8zns9495f1bdifvx19hsy5808hqbxb2bn1srwnr4s3ma1zi"; depends=[openssl Rcpp]; }; recosystem = derive2 { name="recosystem"; version="0.4.2"; sha256="1bn6l23gqmfpr6w60ph7zgv53vy3vnq9zdy5x0a8n1yp6b0lw48x"; depends=[Rcpp RcppProgress]; }; - red = derive2 { name="red"; version="1.3.0"; sha256="183d3r4ifzpyy5iarqrzsspvibfclhlmdp5rca93cj0dxg4hjih6"; depends=[BAT dismo geosphere jsonlite maptools raster rgdal rgeos sp]; }; + recurse = derive2 { name="recurse"; version="1.1.0"; sha256="1zgzzhbvdzqgmgzj43yvpyc7ahbkn96l5wyr1iqpnn3ha78fy0p3"; depends=[Rcpp]; }; + red = derive2 { name="red"; version="1.3.1"; sha256="1m8jk3k0g17dlqbws74wi1lsa11v26si2857sxgzv659f46ybmq3"; depends=[BAT dismo geosphere jsonlite maptools raster rgdal rgeos sp]; }; redR = derive2 { name="redR"; version="1.0.0"; sha256="01safawd9ai34fqxjpc161yzpsk31hfyl8ybcfvdj7a9vdbvcb5i"; depends=[imager]; }; - reda = derive2 { name="reda"; version="0.3.1"; sha256="0313x4vm0jm0lgzspv0ldsblmjgy13dqbsafpikkh603k5pkq1js"; depends=[ggplot2 splines2]; }; - redcapAPI = derive2 { name="redcapAPI"; version="1.3"; sha256="08js2lvrdl9ig0pq1wf7cwkmvaah6xs65bgfysdhsyayx0lz5rii"; depends=[chron DBI Hmisc httr stringr]; }; + reda = derive2 { name="reda"; version="0.4.1"; sha256="0aq6c2h694kdmjis12g4nxq5hdlzsi42nbnpzq7wic305l5r7nxl"; depends=[ggplot2 Rcpp RcppArmadillo splines2]; }; + redcapAPI = derive2 { name="redcapAPI"; version="2.0"; sha256="1n4kwmd0kgmnx2zcgvrz2dlkxmv6wflyj4pll00qvpb1njgnq1xv"; depends=[checkmate chron DBI httr labelVector lubridate stringr tidyr]; }; reddPrec = derive2 { name="reddPrec"; version="0.4.0"; sha256="0zmkaiivvjq8mcaz310zgjjc7y0wgsqv29bf8nhli5qawaczvb9a"; depends=[fields snowfall]; }; redist = derive2 { name="redist"; version="1.3-1"; sha256="0rivfi3jpjvhd36rkhlazx4vr7wsig9lf3im1masjmzd4s00zrd8"; depends=[coda doParallel foreach Rcpp RcppArmadillo sp spdep]; }; redland = derive2 { name="redland"; version="1.0.17-9"; sha256="01jx6r7zznb6cpi2bx36fpsgig3bkc1nv9afz5s2nfqisxiq48w5"; depends=[roxygen2]; }; @@ -9802,8 +9997,9 @@ in with self; { refGenome = derive2 { name="refGenome"; version="1.7.3"; sha256="15p0ra2p1pwhy5ixbhsz1g79c5sc2aap4i4c8kil0m2syg9y45sn"; depends=[DBI doBy RSQLite]; }; referenceIntervals = derive2 { name="referenceIntervals"; version="1.1.1"; sha256="04199nxh216msaghkp66zsi96h76a7c42ldml0fm66v2vamcslg8"; depends=[boot car extremevalues outliers]; }; refimpact = derive2 { name="refimpact"; version="1.0.0"; sha256="0qifqhar2pv81npsxl2pj713vgldyap7y79fq20jpk7qigzf9573"; depends=[checkmate curl httr jsonlite tibble xml2]; }; + refinr = derive2 { name="refinr"; version="0.2.0"; sha256="0dwmqq0wigbzk7vv0ddd066pmwf1sd7rid4nhmsxajv21aghqc3i"; depends=[Rcpp stringdist]; }; refnr = derive2 { name="refnr"; version="0.1.0"; sha256="1gjjzxpyxm1kf1pqk99bd7f2j85rzmww3r1268bccivf19rs881i"; depends=[]; }; - refset = derive2 { name="refset"; version="0.1.0"; sha256="0yj87sp6ghxv20hz5knmw3d7way1hsggk759wqxsbfprd38y6khd"; depends=[]; }; + refset = derive2 { name="refset"; version="0.1.1"; sha256="1xbwvm9066g3f7pd34z5jh04vph4ddy2lkcgmf4kiwa1k5czpwg1"; depends=[]; }; refund = derive2 { name="refund"; version="0.1-16"; sha256="0npq12bf3qmcbgwdxilwvzvf5x2m3qrxljlsx1sz9xczms2dz7kg"; depends=[boot fda gamm4 ggplot2 grpreg lattice lme4 magic MASS Matrix mgcv nlme pbs RLRsim]; }; refund_shiny = derive2 { name="refund.shiny"; version="0.3.0"; sha256="0r2xrm4wz35wn9zg4vvw2ysl7zzbz9i080vnbrlp4yrhhlkhpkm1"; depends=[dplyr ggplot2 gridExtra lme4 plotly refund reshape2 shiny tidyr]; }; refund_wave = derive2 { name="refund.wave"; version="0.1"; sha256="1vnhg7gi5r8scwivqjwhrv72sq8asnm4whx3jk39saphdxpk5hxv"; depends=[glmnet wavethresh]; }; @@ -9813,27 +10009,29 @@ in with self; { regexSelect = derive2 { name="regexSelect"; version="1.0.0"; sha256="0xnb9qa8l63ang4r40ky4qhlrs5mbzvmj98dgij26j3mq1ys1pa7"; depends=[shiny shinyjs]; }; regexr = derive2 { name="regexr"; version="1.1.0"; sha256="1gjv4wl4gjsh5rr0kz057x9j4dhikrm3zzlmxlhd1f9srjdmcdzy"; depends=[]; }; reghelper = derive2 { name="reghelper"; version="0.3.3"; sha256="0lsdsxi3nawqdzs7k1xma95mmywl86k517cihiv8q2s4maihsja3"; depends=[ggplot2 lme4 nlme]; }; - registry = derive2 { name="registry"; version="0.3"; sha256="0c7lscfxncwwd8zp46h2xfw9gw14dypqv6m2kx85xjhjh0xw99aq"; depends=[]; }; + registry = derive2 { name="registry"; version="0.5"; sha256="1yqfl1g6vsl28zn8brzc39659k8lqsmfms7900j7p64ilydyb2sx"; depends=[]; }; reglogit = derive2 { name="reglogit"; version="1.2-5"; sha256="123l9n3m2v16skhj0rf77swlhy0ii6ridz13pp68hrxb72sr243c"; depends=[boot Matrix mvtnorm]; }; regnet = derive2 { name="regnet"; version="0.2.0"; sha256="1c7l2wmb5143ly53griy87c40xr8shxfk54kvf36grjxs7grl7pd"; depends=[glmnet Rcpp RcppArmadillo]; }; regplot = derive2 { name="regplot"; version="0.1"; sha256="1jw93pplg6qdrfv9jhnifkhclxzrhg84zs8gkfl0nb40jxb6pc34"; depends=[beanplot sm survival vioplot]; }; regpro = derive2 { name="regpro"; version="0.1.1"; sha256="02axbq63hsqwg3q2ixr0lpsdai9q6wj57s5k1343q9m0pw90vr73"; depends=[denpro]; }; regress = derive2 { name="regress"; version="1.3-15"; sha256="1cgr0r49cmr8nzs2lr2cm8lli1i8azyas0lbnf1681kyab15c0r7"; depends=[]; }; regsel = derive2 { name="regsel"; version="0.2"; sha256="0wwwpawqsqimaldy0zxnqsy23nwp30ypa5dnrnndwhbs4qz99c9w"; depends=[elasticnet glmnet]; }; - regsem = derive2 { name="regsem"; version="0.9.2"; sha256="1xbqmsgw98hwwyx4cf9qsjhkwkzhv14fsnwb3jrmqmmcg97w4rwp"; depends=[lavaan Rcpp RcppArmadillo]; }; + regsem = derive2 { name="regsem"; version="1.0.6"; sha256="1r5arckzx5a307vn8l4z8npzymw8cyzpj40dpnm5pmcc5ihidl4a"; depends=[lavaan Rcpp RcppArmadillo]; }; regspec = derive2 { name="regspec"; version="2.4"; sha256="18i6k2wqaddrc0dz7v8x3s9205dcfwanqhpnxa9hkpyqzbb17pd3"; depends=[]; }; regsubseq = derive2 { name="regsubseq"; version="0.12"; sha256="0879r4r8kpr8jd6a3fa9cifm7cv0sqzz8z1alkm1b2fr1625md3g"; depends=[]; }; regtest = derive2 { name="regtest"; version="0.05"; sha256="1wrrpp2hvkas0yc512gya3pvd0v97pn4v51k5jxkwyd1pp68zd1q"; depends=[]; }; regtools = derive2 { name="regtools"; version="1.0.1"; sha256="0807r8721qmdl8ahvlzcvqaq2rfvlvhblwbwdpi79fm7dk8vvq1i"; depends=[car dummies FNN mvtnorm]; }; rehh = derive2 { name="rehh"; version="2.0.2"; sha256="00wxx6w9ahddrg3lz14cqyg3dn0rfcxwy1z8arhdp1pn8d48pahw"; depends=[gplots rehh_data]; }; rehh_data = derive2 { name="rehh.data"; version="1.0.0"; sha256="1jkvwmnnmfa7iyvrabgcfzw3vfzx0dlgq47s6yf4zayi437v4di0"; depends=[]; }; + reinforcelearn = derive2 { name="reinforcelearn"; version="0.1.0"; sha256="025v8flr8q2p473kz760vywczhvx8b4lakm6rasr9ijgxpbd2jpn"; depends=[checkmate nnet purrr R6]; }; reinstallr = derive2 { name="reinstallr"; version="0.1.4"; sha256="1fcmy2cyqy4zwh815j2jbmziaiq6kypwsnj5bx0f10dlq3522m5q"; depends=[]; }; rel = derive2 { name="rel"; version="1.3.1"; sha256="1a3gffa9jgfm92q0ba9slwdp8r1n5kycywxp0jbjkpvkdpmacnd4"; depends=[]; }; relMix = derive2 { name="relMix"; version="1.2.3"; sha256="07fcbvhxdfa94ixxvnrkhlm0xxz7wa1lv7xdjp97ajxxp9fy69yl"; depends=[Familias gWidgets paramlink tkrplot]; }; - relSim = derive2 { name="relSim"; version="0.2-0"; sha256="0cqcp7r263sk874l17wz84mzm4b1dxbfbsk74937rcz1wfc623k5"; depends=[Rcpp]; }; + relSim = derive2 { name="relSim"; version="0.2-9"; sha256="0qy1fy7xclzaqwhxpclllpypac41s406jc413cgd4jss5c87k4c4"; depends=[multicool Rcpp xtable]; }; rela = derive2 { name="rela"; version="4.1"; sha256="00ksm7zh1mpd2d5c5d823id3sxj0h3x0ccg6a40fadibvr1ay3ny"; depends=[]; }; relabeLoadings = derive2 { name="relabeLoadings"; version="1.0"; sha256="16gxdrhkaaa33hypnsacn4vd1g3lbqdl3j8p8va54v777c561g81"; depends=[]; }; relaimpo = derive2 { name="relaimpo"; version="2.2-2"; sha256="1rxjg2yw2gyshaij98w83cshxwscnq3ql7bg13n7v4nbjsi1l6zh"; depends=[boot corpcor MASS mitools survey]; }; + relatable = derive2 { name="relatable"; version="1.0.0"; sha256="0147gin6dn76gg7gassar64f0w2gny1sh0k60v7914qhb4sj4s7i"; depends=[compare]; }; relations = derive2 { name="relations"; version="0.6-7"; sha256="1c16sb4v5n44nichwizilqs491rddn8kpf8qrqw54khj5zzg6w52"; depends=[cluster sets slam]; }; relax = derive2 { name="relax"; version="1.3.15"; sha256="0cgvxw3pmy9kx8p81bb5n5nnbn6l9hm07k6hdy7p2j2gl15xxnpq"; depends=[]; }; relaxnet = derive2 { name="relaxnet"; version="0.3-2"; sha256="1l83rk7r4vkcxbfljmibzm8lzpx0vf406hv4h5cy9x0k3rz2bfh0"; depends=[glmnet]; }; @@ -9849,17 +10047,16 @@ in with self; { rematch = derive2 { name="rematch"; version="1.0.1"; sha256="0y3mshvpvz9csmq8hk8jbabx4nxlv5sckvfzvm6920ndg34xw2d4"; depends=[]; }; rematch2 = derive2 { name="rematch2"; version="2.0.1"; sha256="16k0i5p7fa3qfxv59ijyn638wpz8n4jrkrnilqmh5g9l8f8bn4h6"; depends=[tibble]; }; remindR = derive2 { name="remindR"; version="0.0.1"; sha256="0b27v2qm3z8l9vcng8f0rkphjidxkw5n017ysflx180qjizqq632"; depends=[assertthat]; }; - remix = derive2 { name="remix"; version="2.1"; sha256="0s1gaf7vj08xd4m7lc9qpwvk0mpamabbxk71970mfazx6hk24dr0"; depends=[ascii Hmisc plyr survival]; }; remote = derive2 { name="remote"; version="1.2.1"; sha256="1ihzjxbvas7396cwsi9am4pl94naxa9dnhbnh8k0l5p4a50mk33w"; depends=[gridExtra latticeExtra mapdata raster Rcpp scales]; }; - remoter = derive2 { name="remoter"; version="0.3-2"; sha256="0r7hm5cdbmkfn8lv07mn0lb1qq1g92l0hznjih1ykymjm3h6qyh0"; depends=[assertthat getPass pbdZMQ]; }; - remotes = derive2 { name="remotes"; version="1.1.0"; sha256="15q2gr4a2gk5zprs9a0bn21fi2ijayk1s5dibrn7zc0g1mwhk2wc"; depends=[]; }; - rentrez = derive2 { name="rentrez"; version="1.1.0"; sha256="0mlxrbds8bjgi91yxxgsn0dxzjwghnhwjzvvg0z4lpdhrc1nrm4d"; depends=[httr jsonlite XML]; }; + remoter = derive2 { name="remoter"; version="0.4-0"; sha256="1a7m63l8phv5jnazvdqdrqkaqjwqzaac5y4jm2jn0ypy4n8jvkfl"; depends=[argon2 getPass pbdZMQ png]; }; + remotes = derive2 { name="remotes"; version="1.1.1"; sha256="07sxlwd09jzlfn7xakw9hwkr9k970lw2mnl0l3rpb5w71968km98"; depends=[]; }; + rentrez = derive2 { name="rentrez"; version="1.2.0"; sha256="0kqfwz3mx9j9g966nmndlckk30dir1w4kkqblc3qa4f6mzifbrzv"; depends=[httr jsonlite XML]; }; repeated = derive2 { name="repeated"; version="1.1.0"; sha256="0cdyzhhv89186q5nwablcjbqvm7ncq2w5d09iidbajrac9wd1y60"; depends=[rmutil]; }; repfdr = derive2 { name="repfdr"; version="1.2.3"; sha256="0jpk44arg1jib0h2w90h851bs5cd1ss32fab9bfvf9iir2jk8985"; depends=[Rcpp]; }; repijson = derive2 { name="repijson"; version="0.1.0"; sha256="16iypvsmh5r9pk2k6npp17ya5dgkxihsj29pppd3zvdpm3vvd8k1"; depends=[geojsonio ggplot2 jsonlite OutbreakTools plyr sp]; }; replicatedpp2w = derive2 { name="replicatedpp2w"; version="0.1-2"; sha256="0nskwkqm9z2aphpim6pvykhc3fphlsbap3r49nghkwjpngd0qzj8"; depends=[spatstat spatstat_utils]; }; replicationInterval = derive2 { name="replicationInterval"; version="2.0.1"; sha256="1jyvyqr8r2fs1cmbz7zjcc8p116bnkslvx27pqi92y5pxgqvsqvr"; depends=[ggplot2 MASS MBESS pbapply]; }; - replyr = derive2 { name="replyr"; version="0.9.0"; sha256="0f4pf2grbh2rdpxfzxj63jagb1zc049bl8dvhq1hjy4nr12vnphf"; depends=[cdata DBI dbplyr dplyr RSQLite seplyr wrapr]; }; + replyr = derive2 { name="replyr"; version="0.9.1"; sha256="0vxxmnin8a9mrak33cm01wndbc333dyjh83iyn633yc6ll092klr"; depends=[cdata DBI dbplyr dplyr RSQLite seplyr wrapr]; }; repmis = derive2 { name="repmis"; version="0.5"; sha256="0z5mjbsl24yjbl0aawr35grcal44rf2xbwv1hy7bdkms94ix79b5"; depends=[data_table digest httr plyr R_cache]; }; repo = derive2 { name="repo"; version="2.1.2"; sha256="14a7lw1rvn7n7caz3p3y69n9wqw48qsxsjs5kwvpbwsmap7bjj7l"; depends=[digest]; }; repolr = derive2 { name="repolr"; version="3.4"; sha256="13kmy09c7lk8p1mkdss0krcsfb6d7zcnqpwnl38zkanvh8q3fqhm"; depends=[Matrix Rcpp RcppArmadillo]; }; @@ -9872,9 +10069,9 @@ in with self; { repr = derive2 { name="repr"; version="0.12.0"; sha256="1p6a2ryb5iaf4i6nn1iav26bh83wmvncwpk25hyrzd5rxich1bq3"; depends=[]; }; represent = derive2 { name="represent"; version="1.0"; sha256="0jvb40i6r1bh9ysfqwsj7s1g933d7z5fq9d618yjrqr6hbbqsvac"; depends=[]; }; represtools = derive2 { name="represtools"; version="0.1.2"; sha256="1zkabch49q23kd1786km5cb9wcaccbxds11v9hwjzsgrs15g5w35"; depends=[whisker]; }; - reprex = derive2 { name="reprex"; version="0.1.1"; sha256="0jxsnlspy12dnbpkghkmkr6p6783dhvsk3g9mj7gpn5j74qfk6li"; depends=[callr clipr knitr rmarkdown whisker]; }; + reprex = derive2 { name="reprex"; version="0.1.2"; sha256="105d9vsmqfilgpw8psfb2wyiz1hvcycvh4cqhb3ab37lm3rcavvs"; depends=[callr knitr rmarkdown whisker]; }; reproducer = derive2 { name="reproducer"; version="0.1.9"; sha256="092gz58sanpawgg0jk1634x9ki0jw460csbb6cywp0ndghswfgwh"; depends=[ggplot2 gridExtra lme4 MASS metafor openxlsx xtable]; }; - reproducible = derive2 { name="reproducible"; version="0.1.3"; sha256="0a5czpvydy5z98yh6dbhwfya5jix630g0zh3yf1xja069fj6bgav"; depends=[archivist data_table devtools digest fastdigest git2r magrittr raster sp]; }; + reproducible = derive2 { name="reproducible"; version="0.1.4"; sha256="1z14hpinlykj1y1xf2qhfdabyfvfywrkzbyfjv3vhw8lvvkwajlw"; depends=[archivist crayon data_table devtools digest fastdigest git2r magrittr memoise raster Rcpp RCurl sp versions]; }; repurrrsive = derive2 { name="repurrrsive"; version="0.1.0"; sha256="1ffldcs30xa4wcd825bgpcmqsndfyxx70dfmbb3c86ic9kq17p01"; depends=[tibble]; }; reqres = derive2 { name="reqres"; version="0.2.1"; sha256="056cjdx0nmf32vma2jkpbaznbaf76kc4jn0w6nv7blq33qlvx37z"; depends=[assertthat brotli jsonlite R6 stringi urltools webutils xml2]; }; request = derive2 { name="request"; version="0.1.0"; sha256="1q7zd6q00gdqmgq7s7nq1ixmns8zn2amr5zah9rwnsn8dkllj9yh"; depends=[curl httr jsonlite lazyeval magrittr R6 whisker]; }; @@ -9886,29 +10083,30 @@ in with self; { resemble = derive2 { name="resemble"; version="1.2.2"; sha256="189a6b1y720w9ff8cyqazd2d3v1msbfw8zdqr5rmilxvxmnspccs"; depends=[foreach iterators Rcpp RcppArmadillo]; }; reservoir = derive2 { name="reservoir"; version="1.1.5"; sha256="1qvjq8j2gxp6b8m3k3822f9na8a1kbwzzsmq70m763dcq293rgiz"; depends=[gtools]; }; reshape = derive2 { name="reshape"; version="0.8.7"; sha256="14ir3w4bb3bsz8jsak27nj7kpn227pdgr9653gjq5wc93rywi9ig"; depends=[plyr]; }; - reshape2 = derive2 { name="reshape2"; version="1.4.2"; sha256="0swvjmc9f8cvkrsz463cp6snd8bncbv6q8yrfrb4rgkr0dhq6dvd"; depends=[plyr Rcpp stringr]; }; + reshape2 = derive2 { name="reshape2"; version="1.4.3"; sha256="03ki5ka1dj208fc0dclbm0b4xp9d769pah2j9cs34l776p4r9zwa"; depends=[plyr Rcpp stringr]; }; reshapeGUI = derive2 { name="reshapeGUI"; version="0.1.0"; sha256="0kb57isws8gw0nlr6v9lg06c8000hqw0fvhfjsjyf8w6zwbbq3zs"; depends=[gWidgets gWidgetsRGtk2 plyr reshape2]; }; - respirometry = derive2 { name="respirometry"; version="0.5.0"; sha256="0g1azcbp388hp2c0s1qx3l3v8nh88lbslgd6fdi2dn6xfa77sl5i"; depends=[birk lubridate marelac measurements seacarb]; }; + respirometry = derive2 { name="respirometry"; version="0.6.0"; sha256="0dglmf3m8wpqs3jlza6lj8hamb1j1h8b85a4bfrcwkyap7pggcc5"; depends=[birk lubridate marelac measurements seacarb]; }; restfulr = derive2 { name="restfulr"; version="0.0.13"; sha256="1dk45mzrr6ka92yjz7hfhkj12kpx1wg4szv1h1mg80mgga4ganbv"; depends=[RCurl rjson S4Vectors XML yaml]; }; restimizeapi = derive2 { name="restimizeapi"; version="1.0.0"; sha256="1ss6fng5pmqg6cafc256g9ddz8f660c68ysxfan6mn4gdaigz7lb"; depends=[RCurl RJSONIO]; }; restlos = derive2 { name="restlos"; version="0.2-2"; sha256="083w1ldax8bnf3w4119damma2nz75c3ki187b0275i1mqxqrixp7"; depends=[geometry igraph limSolve rgl som]; }; restrictedMVN = derive2 { name="restrictedMVN"; version="1.0"; sha256="0qynkg244gzq0yjb0716w7g1sxdq66i11ss8jij86h2mz3ykj137"; depends=[MASS]; }; - restriktor = derive2 { name="restriktor"; version="0.1-70"; sha256="07j6ypd5jms7kfk0fnlncvwdbmjbfpq3j1fb5j6s2kqn8d21wqy7"; depends=[boot ic_infer lavaan MASS mvtnorm quadprog]; }; + restriktor = derive2 { name="restriktor"; version="0.1-80.711"; sha256="10kbfr7gzah119xm4cnx7br9i9fcga38kymjajw7m2571f4jsji9"; depends=[boot ic_infer lavaan MASS mvtnorm quadprog]; }; resumer = derive2 { name="resumer"; version="0.0.3"; sha256="0ilya3v75989zqm16x69w4599ax2s5j2n6f16bmhwydrmzxs1g48"; depends=[dplyr rmarkdown useful]; }; rethinker = derive2 { name="rethinker"; version="1.1.0"; sha256="02zfx08s5xisv1v4y16iqbddi9kb3fcr249b3414fzvs4nm5as94"; depends=[rjson]; }; - reticulate = derive2 { name="reticulate"; version="1.3.1"; sha256="10ziingkzzhd0775bmwm336khg0grnywj4m1dp34d5ddxja7249f"; depends=[jsonlite Rcpp]; }; + reticulate = derive2 { name="reticulate"; version="1.5"; sha256="0bbsd87ajw9s37g0m8gpv0rws4jfiic9q31fn5a3lb06r2i4wl53"; depends=[jsonlite Rcpp]; }; retimes = derive2 { name="retimes"; version="0.1-2"; sha256="019sllyfahlqnqry2gqw4w5cy4cavrqnwpwrbb25cgjpdb19raja"; depends=[]; }; retistruct = derive2 { name="retistruct"; version="0.5.12"; sha256="11m4i29i3zqh9chyjgdhzqj4yqlslfm8y4q0x14xxc2r9lqbkj9l"; depends=[foreign geometry png R_matlab rgl RImageJROI RTriangle sp ttutils]; }; reutils = derive2 { name="reutils"; version="0.2.3"; sha256="09dhf4s7wz3anrkzqi16abx64gk8ck2142kfd8pv71mjy3x548l7"; depends=[assertthat jsonlite RCurl tibble XML]; }; reval = derive2 { name="reval"; version="2.0.0"; sha256="1yxkyc6wdp5h3cp8i42a9cf0b1cwr4nmpd7svlp7bpfxlcnqqa0d"; depends=[doParallel foreach]; }; - revdbayes = derive2 { name="revdbayes"; version="1.3.1"; sha256="1bd2y3bmd9gd6ih12iy39276pm01d18slhz1k38b8d1nm3bcd2w7"; depends=[bayesplot Rcpp RcppArmadillo rust]; }; + revdbayes = derive2 { name="revdbayes"; version="1.3.2"; sha256="09xxy3yk2fwd0113dgsz0kd2k1k1ghjv9ay2n03b5cnxqaksa99s"; depends=[bayesplot Rcpp RcppArmadillo rust zoo]; }; revealedPrefs = derive2 { name="revealedPrefs"; version="0.2"; sha256="1f871y4wkjznzgwxfbnmrfiafq43cyf0i5hjy68ybxc7bbvfryxc"; depends=[Rcpp RcppArmadillo]; }; revealjs = derive2 { name="revealjs"; version="0.9"; sha256="0h4csxrcl1rzmj3g01nf0mr990zc8swrf4jvmxwqsyzx9v2cqbnc"; depends=[rmarkdown]; }; revengc = derive2 { name="revengc"; version="1.0.0"; sha256="0ccbw61xqjf9y15ghhzx57q3l48xpw9pq2nb11nrqapp5w3f9vzy"; depends=[stringr]; }; revgeo = derive2 { name="revgeo"; version="0.15"; sha256="1ns7d1817475lriss6wwgvdm6lj760p40yxqaifla13c2xb73a55"; depends=[RCurl RJSONIO]; }; + revtools = derive2 { name="revtools"; version="0.2.1"; sha256="0awyyc9f1yvf9yz5slffgm1r2jrnx14ldcqxa32lhj3ig95dm6p9"; depends=[ade4 modeltools plotly shiny shinycssloaders shinydashboard SnowballC stringdist tm topicmodels viridisLite]; }; reweight = derive2 { name="reweight"; version="1.2.1"; sha256="0fv7q1zb3f4vplg3b5ykb1ydwbzmiajgd1ihrxl732ll8rkkfa4v"; depends=[]; }; rex = derive2 { name="rex"; version="1.1.2"; sha256="0alsadgjgass3wr8y5d247j12qqzg454sc84vpskclrkmz778g5x"; depends=[lazyeval magrittr]; }; - rexpokit = derive2 { name="rexpokit"; version="0.26.1"; sha256="12zg56gv9miqlhyi4c61nk2fpgz40xi1kd2wzgs4sjwxn5g8cgvk"; depends=[Rcpp]; }; + rexpokit = derive2 { name="rexpokit"; version="0.26.2"; sha256="0jydx3rlsbdn74gx2is1x6gsb4b64wqbc5jw2sb4xflvvhxfci67"; depends=[Rcpp]; }; rfPermute = derive2 { name="rfPermute"; version="2.1.5"; sha256="0c7yi395j640mvnr1qlm9hy1w6vva33fa2lqb3amzkafy4j1cs63"; depends=[abind ggplot2 gridExtra randomForest reshape2 swfscMisc]; }; rfUtilities = derive2 { name="rfUtilities"; version="2.1-2"; sha256="06vad0m83586dnh7c6qjpi1rsifd67zb2zzdjxcj0bdpvwbaqapd"; depends=[randomForest]; }; rfigshare = derive2 { name="rfigshare"; version="0.3.7"; sha256="1qgzn0mpjy4czy0pnbi395fxxx84arkg8r7rk8aidmd34584gjiq"; depends=[ggplot2 httpuv httr plyr RJSONIO XML yaml]; }; @@ -9924,29 +10122,31 @@ in with self; { rgbif = derive2 { name="rgbif"; version="0.9.9"; sha256="11gji0b1gzh3zpmaff7ly9pvv6jdig5d1277hrss8x4zj7r34iap"; depends=[crul data_table geoaxe ggplot2 jsonlite magrittr oai tibble whisker wicket xml2]; }; rgcvpack = derive2 { name="rgcvpack"; version="0.1-4"; sha256="1vlvw9slrra18qaizqk2xglzky0i6z3bsan85x908wrg8drss4h5"; depends=[]; }; rgdal = derive2 { name="rgdal"; version="1.2-16"; sha256="1j83bc16ndk561vgr67z99gba9bhgcchgir8s504avcs9zmfyzq1"; depends=[sp]; }; + rgdax = derive2 { name="rgdax"; version="0.4.0"; sha256="0f8n016p9y62rpxmqrycmbdb7b3h7vnsyd9qcicqs19yvpm91im2"; depends=[digest httr jsonlite RCurl]; }; rgen = derive2 { name="rgen"; version="0.0.1"; sha256="0gl82v09q1ha58wd1014s46wzkx1yf348bc7jkl6s4qdc6c4vsb8"; depends=[]; }; rgenoud = derive2 { name="rgenoud"; version="5.8-1.0"; sha256="12n34r0p00bmflxrmbj927jm0q19j5r9mjplz5mzb1v8praa7v4x"; depends=[]; }; rgeoapi = derive2 { name="rgeoapi"; version="1.1.0"; sha256="0k8p1l0vrgx0bifbc2i9gxxwih513vbqhjh7fiifyfq3r74i4j7k"; depends=[httr magrittr rjson]; }; rgeolocate = derive2 { name="rgeolocate"; version="1.0.1"; sha256="1v9kd71wpxna1war0rbp91pc5wdqlganmj2c2fc5m5176dnxd2v3"; depends=[httr Rcpp]; }; - rgeopat2 = derive2 { name="rgeopat2"; version="0.1.2"; sha256="17rw2m4cs6adjlvrn9l36flncpn8i9j4qgh0cwwyahrrk8qqk4p7"; depends=[readr sf stringr]; }; + rgeopat2 = derive2 { name="rgeopat2"; version="0.2.0"; sha256="12n5zgx8svcrgsihvhw0drd0l3r48clshs2b36p0md111a2b1gh3"; depends=[readr sf stringr]; }; rgeos = derive2 { name="rgeos"; version="0.3-26"; sha256="0czlwfqilzh1zj61axisg06d9dksdvvg5hgcs31ydaqkh45llllq"; depends=[sp]; }; rgexf = derive2 { name="rgexf"; version="0.15.3"; sha256="0iw1vk32ad623aasf6f8hl0qkj59f1dsc2riwqc775zvs5w7k2if"; depends=[igraph Rook XML]; }; rggobi = derive2 { name="rggobi"; version="2.1.21"; sha256="0zi4rhggngm0y8dsjxqlr2mmfc5wzi7l1qcp5gin4bjlbyf8yb3z"; depends=[RGtk2]; }; rgho = derive2 { name="rgho"; version="1.0.1"; sha256="0jkfmyn3i50vsqciy96wd2fpik6yfg0sz6rrhwb04jv1dmyz2nfa"; depends=[curl dplyr httr jsonlite lazyeval magrittr memoise readr tibble tidyr]; }; - rgl = derive2 { name="rgl"; version="0.98.1"; sha256="11k93b3wkfasx63w0niin1ns1kgzrmjm66la7kvp5rljw3cvwjaz"; depends=[htmltools htmlwidgets jsonlite knitr magrittr shiny]; }; - rglobi = derive2 { name="rglobi"; version="0.2.11"; sha256="0044d5pwjvzjzkia3m1cwkm67376aj8qkpdv51sl0phqcd6d8dv2"; depends=[RCurl rjson]; }; + rgl = derive2 { name="rgl"; version="0.99.9"; sha256="1rv4gq03mbx62v4kyj83y5kh1f77d68aqwmdb00r8szqlx5w5gdm"; depends=[crosstalk htmltools htmlwidgets jsonlite knitr magrittr shiny]; }; + rglobi = derive2 { name="rglobi"; version="0.2.12"; sha256="0gfq9nrv381m3lfmfy57ib58y6kv5vicgrypr8jvrghwyfcdqppg"; depends=[RCurl rjson]; }; rglwidget = derive2 { name="rglwidget"; version="0.2.1"; sha256="0siqxn3gyl98i84p0yha821b4rdrp2i0942mkx819wnf7qwrpqcv"; depends=[rgl]; }; - rgp = derive2 { name="rgp"; version="0.4-1"; sha256="1p5qa46v0sli7ccyp39iysn04yvq80dy2w1hk4c80pfwrxc6n03g"; depends=[emoa]; }; - rgpui = derive2 { name="rgpui"; version="0.1-2"; sha256="0sh5wj4f2wj6g3r7xaq95q89n0qjavchi5kfi6sj1j34ykybbs3g"; depends=[emoa rgp shiny]; }; rgr = derive2 { name="rgr"; version="1.1.14"; sha256="1g5ssxfamghl7d8smlb9zwk31zf5m090y9f88nripad4k9l58fkl"; depends=[fastICA MASS]; }; rgrass7 = derive2 { name="rgrass7"; version="0.1-10"; sha256="0w5vy8163xlfmdrpyp00x25wwq4jnaspzggpvj160azigndsc1kr"; depends=[sp XML]; }; rgw = derive2 { name="rgw"; version="0.1.0"; sha256="12f7bsfg24cld9y47jyqxswgc1bk4adbhhdpycapinbcfhyzc91p"; depends=[]; }; - rhandsontable = derive2 { name="rhandsontable"; version="0.3.4"; sha256="1ng97l2x9hyqv3cckis81p5bxm4wndv6sipyxy26x9pnyw9lq3kp"; depends=[htmlwidgets jsonlite magrittr]; }; + rhandsontable = derive2 { name="rhandsontable"; version="0.3.6"; sha256="1n631vffbfi8mgbcjgav1209ryj88igb17h73xvjdmglh5f0s6dz"; depends=[htmlwidgets jsonlite magrittr]; }; + rhmmer = derive2 { name="rhmmer"; version="0.1.0"; sha256="0875b29i8rl9iypxp7vw514avq0ac4abdlfq3861cdd3kgycw8jh"; depends=[dplyr magrittr readr rlang tidyr]; }; rhnerm = derive2 { name="rhnerm"; version="1.1"; sha256="1fkh2pr4kzvqvagdyjlyab7p591s913104gyq05q170gmvlpmiww"; depends=[]; }; rhoR = derive2 { name="rhoR"; version="1.1.0.0"; sha256="00djh16s144a9cl2z8zm3za1bsnpzd3i5b9nyqad10xlkgll36li"; depends=[]; }; rhosp = derive2 { name="rhosp"; version="1.07"; sha256="09wq96micv9wpr3sx8ir7frkanpy3zi3mwn6rbixw2kxvn5wkkfn"; depends=[]; }; rhub = derive2 { name="rhub"; version="1.0.2"; sha256="18aq28q4vggbp19l9wcw3dylnyv7sd26wg0i5w8jrva5cq1v2n5j"; depends=[assertthat callr clisymbols crayon desc httr jsonlite parsedate prettyunits R6 rappdirs rcmdcheck rematch whoami withr]; }; + rhymer = derive2 { name="rhymer"; version="1.0.0"; sha256="1k15sd5q6a1ijayl585vc54d1zs4nyrxsfck9bn4nlfdiwc5arwf"; depends=[httr jsonlite]; }; ri = derive2 { name="ri"; version="0.9"; sha256="00y01n9cx95bjhdpnh7vi0xd5p6al3sxbjszbyxafn7m9mygmnhv"; depends=[]; }; + ri2 = derive2 { name="ri2"; version="0.1.0"; sha256="02rlczjpfy1q5i7lq4ypindhc65cnryryvbklqjh5dh2xzwjkain"; depends=[estimatr ggplot2 pbapply randomizr]; }; riceware = derive2 { name="riceware"; version="0.4"; sha256="0pky0bwf10qcdgg9fgysafr35xbmnr9q0jbh56fawj99nbyj3m70"; depends=[random]; }; rich = derive2 { name="rich"; version="1.0.1"; sha256="0kasr9gb85qhngfayqy3fvrsr0a066krwxsx21nsxcnss0mrqygr"; depends=[boot vegan]; }; ridge = derive2 { name="ridge"; version="2.2"; sha256="01yldzzlqg0xqha31l3py62lyq7fw5xfsbmz6ifzff24gqsf029x"; depends=[]; }; @@ -9957,13 +10157,14 @@ in with self; { rindex = derive2 { name="rindex"; version="0.12"; sha256="1k9zihvrp955c4lh70zjlsssviy2app8w6mv5ln4nawackbz0six"; depends=[regtest]; }; ring = derive2 { name="ring"; version="1.0.0"; sha256="03sbgxwzms20gp0hkm5s0dihqkx3qf6bw0jrays7jjzrrwzl5657"; depends=[R6]; }; rintrojs = derive2 { name="rintrojs"; version="0.2.0"; sha256="0qdry88f6ci5g6k0i8mycm9k5ibnmb9zjppjvqqaflw3g3nsnli2"; depends=[jsonlite shiny]; }; - rio = derive2 { name="rio"; version="0.5.5"; sha256="1wh2lq2zvfhilhy70g9n5lih0yjdgl7vzb7a3bl34vk67w0xzmf3"; depends=[curl data_table foreign haven openxlsx readxl tibble]; }; - rioja = derive2 { name="rioja"; version="0.9-15"; sha256="1yd0vcis1wsjk2cqkkd07xs0vmkxjw2yz4nnv08gf2cy5hvfsqas"; depends=[mgcv vegan]; }; + rio = derive2 { name="rio"; version="0.5.9"; sha256="1cb7p0kgas3y84sc1p59zcsp0c4qhg01cs9s7kl927qhral778kd"; depends=[curl data_table foreign haven openxlsx readxl tibble]; }; + rioja = derive2 { name="rioja"; version="0.9-15.1"; sha256="18fyqcykg12mf4ap0a2la30656xq32immqz11ddmrfrb0vpd2h7h"; depends=[mgcv vegan]; }; ripa = derive2 { name="ripa"; version="2.0-2"; sha256="0n1gaga0d4bb9qdlm7gksa1nwi4y28kbgwr3icwqgihf1bfb9m81"; depends=[Rcpp]; }; riskR = derive2 { name="riskR"; version="1.1"; sha256="1qadfyb07idfw0bs006kb3917rzda83di6jmsr22941gv78z1wyv"; depends=[]; }; riskRegression = derive2 { name="riskRegression"; version="1.4.3"; sha256="1r9habv47wwhnbvcjl6yin4i415ayhisg67rzggv899nqcyqpm80"; depends=[abind cmprsk data_table doParallel foreach ggplot2 lava prodlim Rcpp RcppArmadillo rms survival]; }; riskSimul = derive2 { name="riskSimul"; version="0.1"; sha256="0s2a1mn6g11m96gqscb916caj2aykcs3rkacpqcdnlyzryk1gsnb"; depends=[Runuran]; }; risksetROC = derive2 { name="risksetROC"; version="1.0.4"; sha256="1fh0jf8v536qzf1v3awx3f73wykzicli4r54yg1z926ccqb4h80l"; depends=[MASS survival]; }; + riskyr = derive2 { name="riskyr"; version="0.1.0"; sha256="1s6yrij5d1vhvzc7nnajjnjmxnhrs0r1psppcvwb0qg3ff181y22"; depends=[diagram vcd]; }; rite = derive2 { name="rite"; version="0.3.4"; sha256="196ashcfj5p52qpnpnrkg7vxq87v7vhf1d7z40mk134gmxk2784j"; depends=[knitr markdown RCurl tcltk2]; }; ritis = derive2 { name="ritis"; version="0.7.0"; sha256="0f2xhxz8aqq1bhz6pwcdlfpchlvrnpgyh926hzfyg0rhz11k4fmv"; depends=[crul data_table jsonlite solrium tibble]; }; riv = derive2 { name="riv"; version="2.0-4"; sha256="1c9k62plqgxcgcm2j1s26hqvgww96n6bfjz2yk7m3p2wf8gkkyam"; depends=[MASS quantreg rrcov]; }; @@ -9975,7 +10176,6 @@ in with self; { rjade = derive2 { name="rjade"; version="0.1"; sha256="0f1jljj6m1almz0na984n0g314y0rl6a0mx04rbrpipgfgz1h37c"; depends=[V8]; }; rjags = derive2 { name="rjags"; version="4-6"; sha256="1bc9bzq31liawg3nzwfczf75vgg56fnqjw0997xvlic4ghgbn96g"; depends=[coda]; }; rje = derive2 { name="rje"; version="1.9"; sha256="1dyd34z6lb0p6zmyax5dpzflgc9a4saka33mvdfcxi5pj0rnygaz"; depends=[]; }; - rjmcmc = derive2 { name="rjmcmc"; version="0.4.0"; sha256="14zil27bs3a657md1fb57layqg7xw7akip710w3ynlih63nb5pn5"; depends=[coda madness mvtnorm]; }; rjson = derive2 { name="rjson"; version="0.2.15"; sha256="1vzjyvf57k1fjizlk28rby65y5lsww5qnfvgnhln74qwda7hvl3p"; depends=[]; }; rjsonapi = derive2 { name="rjsonapi"; version="0.1.0"; sha256="0qshll0y8b6lbfrqmp69w9kc9hgfrz94dk68nddshk9ilg14lx4d"; depends=[crul jsonlite plumber R6]; }; rjstat = derive2 { name="rjstat"; version="0.3.0"; sha256="0r772p0a0x6g96k6r26vb6vjxa68mzjslwg71r0wysa9kqhvypm4"; depends=[checkmate jsonlite]; }; @@ -9984,13 +10184,14 @@ in with self; { rknn = derive2 { name="rknn"; version="1.2-1"; sha256="1x9r01314q0wgqwqzd7d13ycjzb4jzghzd3whgjvm2rsmnabai95"; depends=[gmp]; }; rkt = derive2 { name="rkt"; version="1.5"; sha256="1rgf7dnk4d1b46rns2mb2s1ilxq7hqrh057vrrl00324r4h8bs1k"; depends=[]; }; rkvo = derive2 { name="rkvo"; version="0.1"; sha256="0ci8jqf9nc8hb063nckxdnp0nlyr4ghby356lxm00anw44jlmw8v"; depends=[Rcpp]; }; - rlang = derive2 { name="rlang"; version="0.1.4"; sha256="1x5rwwsx7xrlyspy41yl5nhyvfgzl73195nsdb4rc6z85ab6r6wd"; depends=[]; }; - rlas = derive2 { name="rlas"; version="1.1.5"; sha256="04s71d724yjwdlh5906l6c4dra3q6pqvvqimlx51jjb75yf761pv"; depends=[data_table Rcpp]; }; + rlang = derive2 { name="rlang"; version="0.1.6"; sha256="1x62assn8m7cd0q75r809gxsdqmxmd2br1xz53ykzhrfz3j768kp"; depends=[]; }; + rlas = derive2 { name="rlas"; version="1.1.9"; sha256="1c8sc277jiij1j5sb3wsjdm1pxlp0ia3a39xqzglvmlcnlvcygbq"; depends=[data_table Rcpp]; }; rld = derive2 { name="rld"; version="1.0"; sha256="1glv4q25z14hcwifwg623h77p4awpsn3nk843pnph4sb3p5qbmn3"; depends=[emdbook MASS survival]; }; rleafmap = derive2 { name="rleafmap"; version="0.2"; sha256="1i2qczipg7lr6fl35lcl896r54jia7libxx83darrfzc1hd9sdcq"; depends=[knitr raster sp]; }; rlecuyer = derive2 { name="rlecuyer"; version="0.3-4"; sha256="0d5mcdzn6f5nhwzs165a24z36d0b8gd0cyfyzffvr6p96h8qydy7"; depends=[]; }; rlist = derive2 { name="rlist"; version="0.4.6.1"; sha256="08awy2p7rykc272wvvya4ddszbr7b7s7qv4wr3hs8ylr4jqlh0dv"; depends=[data_table jsonlite XML yaml]; }; rlm = derive2 { name="rlm"; version="1.2"; sha256="18y735z05k9pms6iv1739qg3q12w099qhs42icxhqs5gcdhz92fm"; depends=[]; }; + rlme = derive2 { name="rlme"; version="0.5"; sha256="0p26mw4g12l279lh80vqcjs3pvjr759ap2m622490k1i2ralxzif"; depends=[magic MASS mgcv nlme quantreg Rcpp robustbase stringr]; }; rlo = derive2 { name="rlo"; version="0.3.2"; sha256="0abq42dhapzmh6hvmildbn8zya29c6p1aqbv8avc03g014dwbrd0"; depends=[PythonInR]; }; rly = derive2 { name="rly"; version="1.4.2"; sha256="0mppl3y808k9ydn1lwng2bqmdzbbsla2p9p8qk73mp0xyq8iq9sm"; depends=[futile_logger R6]; }; rma_exact = derive2 { name="rma.exact"; version="0.1.0"; sha256="1igs92la79akyqj84ah23lpcay7i33k7zgzcwm7sii782fhirivx"; depends=[abind metafor]; }; @@ -9999,25 +10200,25 @@ in with self; { rmapzen = derive2 { name="rmapzen"; version="0.3.3"; sha256="0rz3wwy8dbb2620gy07aib2aad6ds001vf47bxrj3vzrxp5h448i"; depends=[assertthat digest dplyr geojsonio httr jsonlite maps maptools purrr rgdal sf sp tibble tidyr]; }; rmarkdown = derive2 { name="rmarkdown"; version="1.8"; sha256="0q1y1qx87xp6vf9h7mfl77rqhmd01xl53l9ap9qj99bfvpabb572"; depends=[base64enc evaluate htmltools jsonlite knitr mime rprojroot stringr yaml]; }; rmatio = derive2 { name="rmatio"; version="0.12.0"; sha256="1cw7j44rgjgbw2xln7lh29ln53lwfadr8rx0sffkjwc7lbh1r6wa"; depends=[Matrix]; }; - rmcfs = derive2 { name="rmcfs"; version="1.2.7"; sha256="1ghl013g8vbnsrhn0vwadxvxd2nzab4g341szvzbdj504bxisl92"; depends=[dplyr ggplot2 igraph reshape2 rJava yaml]; }; + rmcfs = derive2 { name="rmcfs"; version="1.2.9"; sha256="1ar2dsxjf0a6ij91d380arlh9wlywqpfaii80bk6mrq4xg6qy4b0"; depends=[dplyr ggplot2 igraph reshape2 rJava yaml]; }; rmcorr = derive2 { name="rmcorr"; version="0.2.0"; sha256="0s356ly6d46fv28q176ahz2y0w8igmgcy2li0mi4wkj5gnc0yxx4"; depends=[psych RColorBrewer]; }; rmdHelpers = derive2 { name="rmdHelpers"; version="1.2"; sha256="1ahzbs8z7wvh1dwbq1kq8wrjrknxi2gck63k70gj0swjvgk0ih5r"; depends=[dplyr knitr]; }; rmda = derive2 { name="rmda"; version="1.4"; sha256="0agh4mrs8mjjb7hc41r59mbnq0h873fmykljla1cbf4ikhxwjihf"; depends=[caret MASS pander reshape]; }; rmdformats = derive2 { name="rmdformats"; version="0.3.3"; sha256="06nyrdhy26mvgfb1bnlbd8hslybpc01a30a40wwlc3ay7yp0nzrj"; depends=[bookdown htmltools knitr questionr rmarkdown]; }; - rmdshower = derive2 { name="rmdshower"; version="2.0.0"; sha256="0prxq0zakcm5lh1ki15d1d267yxr43295zcxigpy011lawccaglm"; depends=[rmarkdown]; }; + rmdshower = derive2 { name="rmdshower"; version="2.1.1"; sha256="1sjpi5ils31adii51gaa8ly7x93l9ganp6in8rsln6si4jc2ppg9"; depends=[rmarkdown]; }; rmeta = derive2 { name="rmeta"; version="2.16"; sha256="1s3n185kk0ddv8v6c7mbc7cpj6yg532r7is6pjf9vda7317rxywy"; depends=[]; }; - rmetasim = derive2 { name="rmetasim"; version="3.1.5"; sha256="1p1wh4wab1pm9dn5nidnj2294svvdg6w4yiwsjm1bqgi2zpcdjln"; depends=[ade4 adegenet gtools pegas]; }; + rmetasim = derive2 { name="rmetasim"; version="3.1.7"; sha256="0sz4mdprdi6sgkfwfdvh2hr9nxiwq17sw0vggq3cvs7lzb0i6m9r"; depends=[ade4 adegenet gtools pegas]; }; rmgarch = derive2 { name="rmgarch"; version="1.3-0"; sha256="0brqjhplvzl0bgsi6x057rb2cg5x372i746dhddr013p1mx0rlcx"; depends=[Bessel ff MASS Matrix pcaPP Rcpp RcppArmadillo Rsolnp rugarch shape spd xts zoo]; }; rminer = derive2 { name="rminer"; version="1.4.2"; sha256="1hjgcawjrwsf0nv2hlznr1cvpm445yyxc6cq28k2yzyivk74si34"; depends=[adabag Cubist e1071 glmnet kernlab kknn lattice MASS mda nnet party plotrix pls randomForest rpart xgboost]; }; rmngb = derive2 { name="rmngb"; version="0.6-1"; sha256="1wyq8jvzqpy1s6w0j77ngh5x2q7mpj0ib01m8mla20w6yr6xbqjk"; depends=[Hmisc]; }; - rmonad = derive2 { name="rmonad"; version="0.3.0"; sha256="1jbwy8qwj5cqqzgkd5sxan2npa739bdx478gy7n9mcpzmldlkg2i"; depends=[DiagrammeR magrittr pryr R6]; }; + rmonad = derive2 { name="rmonad"; version="0.4.0"; sha256="060hw8ijwnmizzma3q4jy5knif2djzc4x4aahbrv2kaqz157mva2"; depends=[glue igraph magrittr pryr uuid]; }; rmp = derive2 { name="rmp"; version="2.0"; sha256="1cs5ylh5z9mfj3r0yvxxd38ksna2dxk9nnfgqkry1kxibnd1b4ff"; depends=[]; }; - rmpw = derive2 { name="rmpw"; version="0.0.1"; sha256="0h5h77hh6v6nfhivmrs5dyks9krwqyh32kmp0mlwialrpshs0hp3"; depends=[]; }; - rms = derive2 { name="rms"; version="5.1-1"; sha256="1qxzs640yq61629d0fb9ydbx222fbd7q922jrw5v8d64yn6r92f4"; depends=[ggplot2 Hmisc htmlTable htmltools lattice multcomp nlme polspline quantreg rpart SparseM survival]; }; + rmpw = derive2 { name="rmpw"; version="0.0.3"; sha256="1iidiq0pz88wgh155hfy8mw0cwwwcl77zshcjrbw11zpx6p8qy94"; depends=[gtools MASS]; }; + rms = derive2 { name="rms"; version="5.1-2"; sha256="01wjxlqfz6l1bdsvxqq0lsbps0k86hx3ayb6fl2n2hxccvsfxkzi"; depends=[ggplot2 Hmisc htmlTable htmltools lattice multcomp nlme polspline quantreg rpart SparseM survival]; }; rms_gof = derive2 { name="rms.gof"; version="1.0"; sha256="1n0h3nrp11f2x70mfjxpk2f3g4vwjaf4476pjjwy49smxxlxwz82"; depends=[]; }; rmsfact = derive2 { name="rmsfact"; version="0.0.3"; sha256="05s23rfs9prr2ia3h4h9y614xhv91lbgppgf3mrrssxkwz220kd5"; depends=[]; }; rmsfuns = derive2 { name="rmsfuns"; version="0.0.0.2"; sha256="0by2d6l25lf5vidxbkcxghpxycffyldzzbxcw6h4rm86zmkkv1m0"; depends=[magrittr purrr readr tidyverse xts zoo]; }; - rmumps = derive2 { name="rmumps"; version="5.1.1-3"; sha256="1bkz6kdyjrz88f0awp9zx0kv3jx2fqpnf8ip2vhrpwcgrbv6d0d8"; depends=[Rcpp]; }; + rmumps = derive2 { name="rmumps"; version="5.1.2-4"; sha256="1qdpvyxwb18dapa8xqj8kjjmrnrqixkn29qn6q4cnwdwi1zcbdx6"; depends=[Rcpp]; }; rmutil = derive2 { name="rmutil"; version="1.1.0"; sha256="0f30afqbzrsgbnfpniwhbw4b8hlzc5zyaixvn9giggzwczfnf29k"; depends=[]; }; rnaseqWrapper = derive2 { name="rnaseqWrapper"; version="1.0-1"; sha256="1fa3hmwrpccf09dlpginl31lcxpj5ypxspa0mlraynlfl5jrivch"; depends=[ecodist gplots gtools]; }; rnaturalearth = derive2 { name="rnaturalearth"; version="0.1.0"; sha256="193b31a7n9jhc607mhwxbpx5gr0fpj3qasm9dbi6kcc7vac3ilgm"; depends=[sf sp]; }; @@ -10040,12 +10241,13 @@ in with self; { robeth = derive2 { name="robeth"; version="2.7"; sha256="03pnwd3xjb9yv8jfav0s4l9k5pgpampp15ak7z0yvkjs20rvfq3d"; depends=[]; }; robets = derive2 { name="robets"; version="1.3"; sha256="123f08h763ifd2ydh1hp3jp6gqnc12cia9ndlp8jxkck8l3pnwkh"; depends=[forecast Rcpp]; }; robfilter = derive2 { name="robfilter"; version="4.1"; sha256="161rsqyy2gq1n6ysz0l4d4gqvxhs72hznc2d5hljxdaz3sbdzzig"; depends=[lattice MASS robustbase]; }; + robis = derive2 { name="robis"; version="1.0.0"; sha256="02spxy33vh675dvhx2v6f06hxzcwfrsmkzb6yk5h30xp21blqv4g"; depends=[dplyr httr jsonlite leaflet]; }; robmed = derive2 { name="robmed"; version="0.1.1"; sha256="1716vzci0lmim4n28bc2pjky1shjxqrclgllj3hc4dzf8j22dxbz"; depends=[boot ggplot2]; }; - robotstxt = derive2 { name="robotstxt"; version="0.5.2"; sha256="1bgc6avwzfssmshkmg2vxsyhj4sq9hmyxwfyv5yfy883h2an4x2q"; depends=[future httr magrittr spiderbar stringr]; }; + robotstxt = derive2 { name="robotstxt"; version="0.6.0"; sha256="1xia7xivqnqj0xis6i4qzm3v414ga1m7lmv1piz1b431faq9s1ai"; depends=[future httr magrittr spiderbar stringr]; }; robreg3S = derive2 { name="robreg3S"; version="0.3"; sha256="0rv8qh98wws1f40d1kmysyy9qin0ngsvwq63cnxbwi290wsnrvls"; depends=[GSE MASS robustbase]; }; robumeta = derive2 { name="robumeta"; version="2.0"; sha256="1ynlfxlzh442jd1cf02j0f948m16d536a30gb4bf7208baqri1vg"; depends=[]; }; robust = derive2 { name="robust"; version="0.4-18"; sha256="1b7qh1aff500nd6dh4y2ipmjgdiq8991shflb63pc39vpc0ny6g4"; depends=[fit_models lattice MASS robustbase rrcov]; }; - robustBLME = derive2 { name="robustBLME"; version="0.1.2"; sha256="02wlycmq86sl4r9880z2845rmkn6ayq9l7y7a5whzhb0s3r2dpji"; depends=[doParallel foreach iterators lme4 mvtnorm numDeriv Rcpp RcppArmadillo]; }; + robustBLME = derive2 { name="robustBLME"; version="0.1.3"; sha256="18wx116l1riy4wn4083kxl637mkyyi9wbwnmvhkgqw3vb36s4vxd"; depends=[doParallel foreach iterators lme4 mvtnorm numDeriv Rcpp RcppArmadillo]; }; robustDA = derive2 { name="robustDA"; version="1.1"; sha256="1yys6adkyms5r4sw887y78gnh97qqr7sbi5lxv5l9bnc4ggcfiz6"; depends=[MASS mclust Rsolnp]; }; robustETM = derive2 { name="robustETM"; version="1.0"; sha256="1dlj79v08bls500lb81rya6vwx58h97rpq1sy9zwd3mfl9b6awp9"; depends=[]; }; robustHD = derive2 { name="robustHD"; version="0.5.1"; sha256="14v6l0appy206zx1jcv7m14r2z9g12dpkm6zxzv756rca2yj8fp5"; depends=[ggplot2 MASS perry Rcpp RcppArmadillo robustbase]; }; @@ -10056,7 +10258,7 @@ in with self; { robustgam = derive2 { name="robustgam"; version="0.1.7"; sha256="0s1z7jylj757g91najbyi1aiqnssd207jfm9yhias746540qp3kw"; depends=[mgcv Rcpp RcppArmadillo robustbase]; }; robustlmm = derive2 { name="robustlmm"; version="2.1-4"; sha256="0qli04ylw25vc35k1maaddkn7rh8y5p7ggla1qvi8b1sglg43xhh"; depends=[ggplot2 lattice lme4 Matrix nlme Rcpp RcppEigen robustbase xtable]; }; robustloggamma = derive2 { name="robustloggamma"; version="1.0-2"; sha256="1cifyasrik010zs8jsz0kzzmwm3qmc0y7h2dahg2ibpwxfcqfcpq"; depends=[numDeriv RobustAFT robustbase survival]; }; - robustrank = derive2 { name="robustrank"; version="2016.11-9"; sha256="11x9smfkbq4f0p2n3gxhwzs2xsd019pilxrds601yshz754ccj98"; depends=[]; }; + robustrank = derive2 { name="robustrank"; version="2017.12-2"; sha256="0lcjn77lsdfbcby89hfcz2h049v2fndw7rankdcdgnl6lw2bdpvr"; depends=[kyotil]; }; robustrao = derive2 { name="robustrao"; version="1.0-3"; sha256="0gcxxizsg380blrv55vl9f3az8gnr274c6idi0pimhh5c26h7ma6"; depends=[doParallel foreach gmp igraph iterpc quadprog]; }; robustreg = derive2 { name="robustreg"; version="0.1-10"; sha256="1zwfgmla6wna48vq5hbz7c7fvmb29y949790w2j6x8pkjzr781sz"; depends=[Matrix Rcpp RcppArmadillo]; }; robustsae = derive2 { name="robustsae"; version="0.1.0"; sha256="0fi1fpqnfj6vkmidlr90kqbn1bxxxqb5qpqqrz9rrimlsvrc4ddl"; depends=[coda lattice MCMCpack mvtnorm pscl]; }; @@ -10079,14 +10281,15 @@ in with self; { rootWishart = derive2 { name="rootWishart"; version="0.4.0"; sha256="028k1h6vibbcnmh35kg0z388c991k8v78ac0fbrv1k2ajqrrl4lg"; depends=[BH Rcpp RcppEigen]; }; roots = derive2 { name="roots"; version="1.0"; sha256="1ssmmmrg18xmqxs6f7dqv07357iwcvk21j1gxsl8s9njbj2plxai"; depends=[animation igraph rARPACK]; }; rope = derive2 { name="rope"; version="1.0"; sha256="06qp6h8cjnz0yacm4r39k99hrw74iyq16h5mqfcki7sf3zqbfm7r"; depends=[]; }; - ropenaq = derive2 { name="ropenaq"; version="0.2.4"; sha256="08kwk6zacmmi9vq0fwq1jvb2d5k4gh041brhrqzwkyhj4i1crlp2"; depends=[crul dplyr jsonlite lazyeval lubridate tidyr]; }; + ropenaq = derive2 { name="ropenaq"; version="0.2.5"; sha256="0rvp41c4px773w29m9483rbkv3y365n8n6gf969mzbdpvx90pyql"; depends=[crul dplyr jsonlite lazyeval lubridate tidyr]; }; ropensecretsapi = derive2 { name="ropensecretsapi"; version="1.0.1"; sha256="0d4yl0h4am3blskdnzk119hk374c3vx0cg99r20w07yh8jfafrw7"; depends=[RCurl RJSONIO]; }; ropercenter = derive2 { name="ropercenter"; version="0.1.0"; sha256="0rp2dwdkl3qlwm8di0q184ppr77zs6i7njyr305pnxmbad119w9d"; depends=[dplyr foreign haven httr rvest stringr xml2]; }; - rorcid = derive2 { name="rorcid"; version="0.3.0"; sha256="1c4di3cgx9b86v5fnsahf7gd1shb6klrg4mfyhf4irndn7b1r562"; depends=[httr jsonlite tibble]; }; + rorcid = derive2 { name="rorcid"; version="0.4.0"; sha256="1diz14b5jzs9i4khyykq58cbgz87qraivv9lhq5nrrrfi2gryl9r"; depends=[crul data_table fauxpas httr jsonlite tibble xml2]; }; rorutadis = derive2 { name="rorutadis"; version="0.4.2"; sha256="13a7xj4qw1nd8xgrqhrki3php960lgy9gy38sg4kpvs4j2rwijzc"; depends=[ggplot2 gridExtra hitandrun Rglpk]; }; - rosetteApi = derive2 { name="rosetteApi"; version="1.8.0"; sha256="0d5pxffax9g3i61rl3nbbn55ig2xypbbqjqv1v40iwnn9c83mksi"; depends=[httr jsonlite]; }; + rosetteApi = derive2 { name="rosetteApi"; version="1.9.0"; sha256="0pnrfc0dcbh5r3qwfwyb0q063bzwpw4ga60965y5qyxz64cyx74r"; depends=[httr jsonlite]; }; rosm = derive2 { name="rosm"; version="0.2.2"; sha256="0carzc8rn8997vdqgcf7a6lcpmw7dldhnh6n0rjyb09and8yca7r"; depends=[abind curl jpeg plyr png prettymapr rgdal rjson sp]; }; rospca = derive2 { name="rospca"; version="1.0.3"; sha256="0nnqwvjsavxp7ci8xpvkri8ff9xwlcdvx33k32vf1sywr86mr1xs"; depends=[elasticnet mrfDepth mvtnorm pcaPP pracma robustbase rrcov rrcovHD]; }; + rosqp = derive2 { name="rosqp"; version="0.1.0"; sha256="0975g7p75bq238g7lr200svsqm9i11z7l331r0igm5ycahljrlsm"; depends=[Matrix R6 Rcpp]; }; rotationForest = derive2 { name="rotationForest"; version="0.1.3"; sha256="1z2wk3mcs5hrahsxralidbc0dd8gxdbwjpr2f71g4g3isfx1ic8d"; depends=[rpart]; }; rotations = derive2 { name="rotations"; version="1.5"; sha256="1zksh6hyxdkm0lvvrld6dgkmhszn6wsjrjzr2xbn3af3gsvsydaa"; depends=[ggplot2 Rcpp RcppArmadillo rgl sphereplot]; }; rotl = derive2 { name="rotl"; version="3.0.3"; sha256="0pfpgynvdi011m6j6gs98irldpjrdc8rgza36ndk60q2w5z436h4"; depends=[ape assertthat httr jsonlite rentrez rncl]; }; @@ -10096,7 +10299,7 @@ in with self; { roxygen2 = derive2 { name="roxygen2"; version="6.0.1"; sha256="0xpzziminf225kjwhyl51kgkzhplyzhk5farhf5s822krl2xqbfj"; depends=[brew commonmark desc digest R6 Rcpp stringi stringr xml2]; }; royston = derive2 { name="royston"; version="1.2"; sha256="1rywc89qzx0hldbq10201bjdhz60pq2gmgd9b9j52mza3w4canjz"; depends=[moments nortest]; }; rpanel = derive2 { name="rpanel"; version="1.1-3"; sha256="1wm0dcbyvxz4ily8skz2yda44n74x2nmc4pg11ja0yvk038gjfns"; depends=[]; }; - rpart = derive2 { name="rpart"; version="4.1-11"; sha256="165djqj7lk81jr7z5fwccq3h7ayys26hx1kj9hndvg2rkyaq1arq"; depends=[]; }; + rpart = derive2 { name="rpart"; version="4.1-12"; sha256="177p03w4m0qshb3sqkdyixim3f44g2an31v3vlbjmpzjvd5ff6yq"; depends=[]; }; rpart_plot = derive2 { name="rpart.plot"; version="2.1.2"; sha256="1hn8s0fawwsr6j4m7wf38q7a608bjf9v1w706p49a08189baqdxz"; depends=[rpart]; }; rpart_utils = derive2 { name="rpart.utils"; version="0.5"; sha256="00ahvmly6cdf7qhhcic0dbjlljqq8kbhx15rc7vrkd3hzd55c0im"; depends=[rpart]; }; rpartScore = derive2 { name="rpartScore"; version="1.0-1"; sha256="15zamlzbf6avir8zfw88531zg5c0a6sc5r9v5cy9h08ypf34xf4y"; depends=[rpart]; }; @@ -10104,84 +10307,85 @@ in with self; { rpatrec = derive2 { name="rpatrec"; version="1.0.1"; sha256="0zj461frf6n5s97zq7r52q0blsn2xq2759impgz6v4pr87gmq0si"; depends=[np]; }; rpca = derive2 { name="rpca"; version="0.2.3"; sha256="135q3g8jmn9rwamrc9ss45cnbfyw8kxcbrf0kinw8asz70fihj9z"; depends=[]; }; rpcdsearch = derive2 { name="rpcdsearch"; version="1.0"; sha256="17g3x15qgv2hamlj451sb88i83n8svw5vnmjpijp5cnn5d1jx0d6"; depends=[assertthat combinat dplyr stringr xlsx]; }; - rpdo = derive2 { name="rpdo"; version="0.2.2"; sha256="1yzvi4givrwpbs56p2vf0gciaigq50qq0r0n5lyaqk73azzhnhxc"; depends=[curl datacheckr dplyr lubridate magrittr readr stringr tidyr]; }; - rpf = derive2 { name="rpf"; version="0.55"; sha256="1l451qvbfhl6lxm9cd997vxy8lcv7r936vzagf3lablnra5spwcb"; depends=[mvtnorm RcppEigen]; }; + rpdo = derive2 { name="rpdo"; version="0.2.3"; sha256="150kd9pvfr7msrh55vsqcj8lv994izlvhxf4g5n1qbzdcaqsdjzp"; depends=[checkr]; }; + rpf = derive2 { name="rpf"; version="0.56"; sha256="089n2mmczvvwga8ak3l0p326qsp83d0cz03lc6fhx6a9w5vhl67i"; depends=[mvtnorm RcppEigen]; }; rpg = derive2 { name="rpg"; version="1.6"; sha256="1vn5cswrkmw98z1dr0f0yjkz3n8kwvjb4zknqg81fzqsagfc89yx"; depends=[getPass RApiSerialize Rcpp uuid]; }; rpgm = derive2 { name="rpgm"; version="1.1.1"; sha256="07zynn6rzpi651i3nyfgyv4wbxkmxhr1cjhmqn7i0zcb11yv20dc"; depends=[]; }; - rphast = derive2 { name="rphast"; version="1.6.5"; sha256="1jff94hx7skvd6icbrcyabsvz80sgqqv28vz91mcz5jh6v6afhl3"; depends=[]; }; + rphast = derive2 { name="rphast"; version="1.6.9"; sha256="111m824z7z0lqdj4kk4cp1yfjhx7d5d9463k892dyvgjvkagvi9g"; depends=[]; }; rpicosat = derive2 { name="rpicosat"; version="1.0.1"; sha256="1zj2d6jairmvya91vhv9kpkf34zmzl9vlha5yvfjj0j0apmqc0li"; depends=[]; }; rpinterest = derive2 { name="rpinterest"; version="0.3.1"; sha256="0kkf73byhgzqxw85wda3nh7qsq81pc035vi6z3fhnvb9ssszwakc"; depends=[httr magrittr rjson]; }; - rpivotTable = derive2 { name="rpivotTable"; version="0.2.0"; sha256="0h7za8bmyg7b150l7a2jz6czxdh4gi0q0gv6ddpdlgk86slw9nmh"; depends=[htmlwidgets]; }; + rpivotTable = derive2 { name="rpivotTable"; version="0.3.0"; sha256="0ndhsw4nnz6wf0v8dh4sz8867m01jjkzw6aq7f490z1ypa3d9fv5"; depends=[htmlwidgets]; }; rplos = derive2 { name="rplos"; version="0.8.0"; sha256="0l38zllzklsy6q2l2r0v2x8wcsldnxjhilcsq5ykl1k35gbva19y"; depends=[crul dplyr ggplot2 jsonlite lubridate plyr reshape2 solrium whisker]; }; rplotengine = derive2 { name="rplotengine"; version="1.0-6"; sha256="1x9lf5h6cmjyi5xyvmk2ii2dwkwmjqbg0m1fhfabay0flqc7qdm0"; depends=[xtable]; }; rpms = derive2 { name="rpms"; version="0.2.1"; sha256="14fljzxpxbsx5x06aq39rdq8h25n0z6bq7g7ncgjp1lgk9ml6gdq"; depends=[Rcpp RcppArmadillo]; }; rpn = derive2 { name="rpn"; version="1.0"; sha256="0wk8y4yk6wqzbq5bqv6zncfp9az5vn8xgwh426pk3bxm3v4xi16i"; depends=[BBmisc checkmate]; }; rpnf = derive2 { name="rpnf"; version="1.0.5"; sha256="07byg0ym4d2cr6fp74z379jhsaw4c0xrwf622dvhwa4frn4anl60"; depends=[]; }; rportfolios = derive2 { name="rportfolios"; version="1.0-1"; sha256="00xxh85jpl0rw8fv84i7zmq0psc92pq7hharnr4szbmhgz8kbc35"; depends=[truncdist]; }; - rpostgis = derive2 { name="rpostgis"; version="1.3.0"; sha256="09q54si187wv2bh2akrdan3d1klx9jczi6bllpl5iwjp1wasxiys"; depends=[DBI raster rgeos RPostgreSQL sp]; }; + rpostgis = derive2 { name="rpostgis"; version="1.4.0"; sha256="0rgi7ax2n2fln12501zshwaz23nns9qk4vy1ylnaqb4bg0x30gn4"; depends=[DBI raster rgeos RPostgreSQL sp]; }; rpostgisLT = derive2 { name="rpostgisLT"; version="0.5.0"; sha256="0dvzprhwdqm763b0n82vzj4blns9chlcpp7wkrsm1w67zakn02mk"; depends=[adehabitatLT DBI rpostgis RPostgreSQL sp testthat]; }; rpql = derive2 { name="rpql"; version="0.5"; sha256="1d5mr04jk08l617zkqn13njglwj0w9an1rix937bcxw69blshahi"; depends=[gamlss_dist lme4 MASS Matrix mvtnorm]; }; rprev = derive2 { name="rprev"; version="0.2.4"; sha256="1krrplgi2qfcm5kdz2am8fq8kjx67gjwxyd4ylf406r18xbvjd1d"; depends=[doParallel dplyr foreach ggplot2 lazyeval magrittr rms survival tidyr]; }; rprime = derive2 { name="rprime"; version="0.1.0"; sha256="1v6n1qi0i7x8xgizbyvp1mnwc316lsan4rvam44fgjj45fcd79gd"; depends=[assertthat plyr stringi stringr]; }; rprintf = derive2 { name="rprintf"; version="0.2.1"; sha256="0rwqpln0igxb4m6d6jyp7h3shfb8sbp0kj7cgkffjp88hn9qm4h3"; depends=[stringi]; }; - rprojroot = derive2 { name="rprojroot"; version="1.2"; sha256="1fgyxv1zv04sllcclzz089xl6hpdzac7xk61l0l4acb7rqsx5d18"; depends=[backports]; }; - rpsftm = derive2 { name="rpsftm"; version="1.2.1"; sha256="0i7m405gi8h1pmxhqm3xxy3i322hp6al898sgxhlsy4rqb8pmljj"; depends=[ggplot2 rootSolve survival]; }; + rprojroot = derive2 { name="rprojroot"; version="1.3-2"; sha256="12r3fdxmi2pmwn6ic3rhg0b20ll5z420m0d8fziv1n21961namnz"; depends=[backports]; }; + rpsftm = derive2 { name="rpsftm"; version="1.2.2"; sha256="0xfw2rc8k9nnwzmzf803w5aarhm09hvi8ry5gi21d9n8fxsj1q97"; depends=[ggplot2 rootSolve survival]; }; rpst = derive2 { name="rpst"; version="1.0.0"; sha256="10cbgj67lqgh5bawwa0nwj9kfl3jg4vdm121kc61q199v8dw7nrz"; depends=[plotrix survival]; }; rpsychi = derive2 { name="rpsychi"; version="0.8"; sha256="1h40kbqvvwwjkz5hrclj6j22zhav3yyfbbhqahs1whwjkksnam4w"; depends=[gtools]; }; - rptR = derive2 { name="rptR"; version="0.9.2"; sha256="0qa9ml4kmmm0r06akf9azra0z3903w1qfi2zkvzhxahp508l20gs"; depends=[lme4 pbapply]; }; + rptR = derive2 { name="rptR"; version="0.9.21"; sha256="0wqh9d372s2222qm5w0wx77l2sj7zvdnl7zvxcn5wfs3cz84fj15"; depends=[lme4 pbapply]; }; rpubchem = derive2 { name="rpubchem"; version="1.5.10"; sha256="06j9ir65ykky5hdbyv74fnddwqd39jxvr6jig0kjqisc75k4spjz"; depends=[base64enc car data_table fingerprint iterators itertools RCurl RJSONIO stringr XML]; }; rqPen = derive2 { name="rqPen"; version="2.0"; sha256="13m21v753njaramgpbhn0lb793b6946crv5v8vl127w38q0z3wyd"; depends=[quantreg regpro]; }; + rquery = derive2 { name="rquery"; version="0.3.1"; sha256="1lgcky7rh7awabp4rfmn55c3dhfpkxqhnz2phq1ph727x5kldw22"; depends=[DBI RSQLite wrapr]; }; rr = derive2 { name="rr"; version="1.4"; sha256="1c2h6ibjfwrjfqh1if3c90pdh0g2rf3p71j4p9w23xbbrx2l80pl"; depends=[arm coda magic MASS]; }; - rrBLUP = derive2 { name="rrBLUP"; version="4.5"; sha256="19xzlmbi43nywyxcydcjzbs9a175fcwps5ndnvkz7xp2g3lnpcdq"; depends=[]; }; + rrBLUP = derive2 { name="rrBLUP"; version="4.6"; sha256="1bw4pjj9hm9ik5bvvklnlkykhlqm6k7pbkma1iwc3kbg8shpbd18"; depends=[]; }; rrBlupMethod6 = derive2 { name="rrBlupMethod6"; version="1.3"; sha256="1qwv954mhry46ff2ax48xcmnasygi5alv8d413g3qbk2da6i0d8l"; depends=[]; }; rrcov = derive2 { name="rrcov"; version="1.4-3"; sha256="0kagqggi634mvrhd67ia7mpjrj5v6w2wq0z3kyppg5xkvzh335nq"; depends=[cluster lattice mvtnorm pcaPP robustbase]; }; rrcov3way = derive2 { name="rrcov3way"; version="0.1-10"; sha256="0ybl759mfva185z2mjs5s8cjim9h8dk4gkqnva2rj9kxp7i45srd"; depends=[robustbase rrcov ThreeWay]; }; rrcovHD = derive2 { name="rrcovHD"; version="0.2-5"; sha256="1wv50lcjf0fsxb1zagxbrcx68ilfmnmkc8ccpy9hw3qql5p368ij"; depends=[pcaPP pls robustbase robustHD rrcov spls]; }; rrcovNA = derive2 { name="rrcovNA"; version="0.4-9"; sha256="1qc9xqm5x55dqjx1y7s4a2nwc07v32rygicbb8469knxasf92cs3"; depends=[cluster lattice norm robustbase rrcov]; }; - rrecsys = derive2 { name="rrecsys"; version="0.9.7.2"; sha256="0mvvqfl1vlsgm8k2mdk00vnv1bjh25gpfv9nk8ysxl3znn10xyhy"; depends=[ggplot2 knitr MASS Rcpp registry]; }; + rrecsys = derive2 { name="rrecsys"; version="0.9.7.3"; sha256="034p7ncnzlkniicl5nd58m9wjy7mc00f027zpg5das226svhfywf"; depends=[ggplot2 knitr MASS Rcpp registry]; }; rredis = derive2 { name="rredis"; version="1.7.0"; sha256="0wzamwpmx20did8xj8x9dllri2ps83viyqjic18ari7i4h1bpixv"; depends=[]; }; rredlist = derive2 { name="rredlist"; version="0.4.0"; sha256="0j2hab26zs9dyg9fggza7yffbvwvnmrk5frbfs2ys8h3hg2x6ncy"; depends=[crul jsonlite]; }; rrefine = derive2 { name="rrefine"; version="1.0"; sha256="1lh3vddrp5k9bhz5spv93w0qm9z5lskpdgxfksys0l3275hzx1lm"; depends=[httr readr rlist]; }; - rreg = derive2 { name="rreg"; version="0.1.1"; sha256="1hh7r7cn2b3r5iaz7j9z2v8lhncijfw479ggy368fxi0vm5mdqq0"; depends=[directlabels ggplot2]; }; + rreg = derive2 { name="rreg"; version="0.1.2"; sha256="06zang5m39bla4c5wxb9p4fgrn66a69l190z5gnsyp8r6b166x3p"; depends=[directlabels ggplot2]; }; rrepast = derive2 { name="rrepast"; version="0.6.0"; sha256="1d6nk6437c4bxbyvpzdlgd1kxh651979m0k7aadi9fl77i5k2x3w"; depends=[digest ggplot2 gridExtra lhs rJava sensitivity xlsx]; }; rriskDistributions = derive2 { name="rriskDistributions"; version="2.1.2"; sha256="1d9dwgw8la8wwq9cdnl7qibkzbdl4cj0qvf05x7w13ip973dwpaq"; depends=[eha mc2d msm tkrplot]; }; rrlda = derive2 { name="rrlda"; version="1.1"; sha256="06n9jah190cz25n93jlb5zb0xrx91bjvxgswwdx9hdf0fmwrpkvz"; depends=[glasso matrixcalc mvoutlier pcaPP]; }; rroad = derive2 { name="rroad"; version="0.0.4"; sha256="1zs21j6rhdab8qrw2ybxnj8lyvbzmxs4zzfskh4npd22w5yy597c"; depends=[]; }; - rrpack = derive2 { name="rrpack"; version="0.1-6"; sha256="0x18z97spg6k29b39k283lp7k2ipfa4gwqrzdxpljgkkdicjs4fv"; depends=[ggplot2 glmnet lassoshooting MASS Rcpp RcppArmadillo]; }; + rrpack = derive2 { name="rrpack"; version="0.1-7"; sha256="0svrw2ik59hjyfb0kag4nv8ilcaz7irmkp7ndbxxn0jg7dacb411"; depends=[ggplot2 glmnet lassoshooting MASS Rcpp RcppArmadillo]; }; rrr = derive2 { name="rrr"; version="1.0.0"; sha256="0sv6k70mv325yjm8yjy4dw8cqc0xc071iiv94fk1l1yfz0n67prz"; depends=[dplyr GGally ggplot2 magrittr MASS plotly Rcpp]; }; - rsMove = derive2 { name="rsMove"; version="0.2.1"; sha256="1vi4gb30sibmyvng56r0m4fl256ql5838nnarc9mjfm8hiq67rdy"; depends=[caret gdalUtils ggplot2 httr ncdf4 raster RCurl rgdal sp XML]; }; + rsMove = derive2 { name="rsMove"; version="0.2.3"; sha256="0s256ifiq76rakabw2jn5jslsdd0r55cy7hm55214pgjfq8fiqpi"; depends=[caret gdalUtils ggplot2 raster RCurl rgdal sp]; }; rsae = derive2 { name="rsae"; version="0.1-5"; sha256="1f3ry3jwa6vg2vq2npx2pzzvfwadz8m48hjrqjk860nfjrymwgx5"; depends=[]; }; rsample = derive2 { name="rsample"; version="0.0.2"; sha256="10lmpy4ca045j2fxbz5xzl1w9242dkp6sc8hhrk0fxs0dkfb7amf"; depends=[broom dplyr purrr recipes rlang tibble tidyr]; }; rsatscan = derive2 { name="rsatscan"; version="0.3.9200"; sha256="00vgby24jknq8nl7rnqcwg7gawcxhwq8b7m98vjx2hkqx39n4g21"; depends=[foreign]; }; - rscala = derive2 { name="rscala"; version="2.5.0"; sha256="1mbjq9smx0wxpwb47n4ak8yxf1zrq45ndg8gy1lcygbrnlcfa488"; depends=[]; }; + rscala = derive2 { name="rscala"; version="2.5.1"; sha256="0az638dlg7nqhj7xf1bwcpv9anqqcif8ni4a8q68lcn2sxb4wamp"; depends=[]; }; rscimark = derive2 { name="rscimark"; version="1.0"; sha256="1jsjz4d5bnxb90qqzz42m4nyvm8d8w8bs0m1r5g2n78zmckqb8vy"; depends=[checkmate]; }; rsconnect = derive2 { name="rsconnect"; version="0.8.5"; sha256="0y2sajcw1yngig06l7bxzcw993jbx13fl47fag9fa4f70qpnnwmq"; depends=[digest packrat PKI RCurl RJSONIO rstudioapi yaml]; }; rscopus = derive2 { name="rscopus"; version="0.5.3"; sha256="1d6265ffmhd6ajlp607y5jy77nqgcrdym6w1j8vnil0705z3swzb"; depends=[httr plyr tidyr]; }; - rscorecard = derive2 { name="rscorecard"; version="0.5.0"; sha256="0kgdv64vqbd6ik7mxf7awfk6bgvd0ng3ngz2alhg1v4gwhpj10dp"; depends=[dplyr httr jsonlite lazyeval magrittr]; }; + rscorecard = derive2 { name="rscorecard"; version="0.6.0"; sha256="142i64faqindaqd14yylbs2ynxg8n5rzl4w0ya0lxv8kwkj0fg75"; depends=[dplyr httr jsonlite lazyeval magrittr]; }; rsdepth = derive2 { name="rsdepth"; version="0.1-5"; sha256="064jbb6gnx0sm41w3sbi6mvsbzsfkjqfici6frk8sfm9ybvm591j"; depends=[]; }; - rsdmx = derive2 { name="rsdmx"; version="0.5-10"; sha256="0vr86n22c7nxdgg3zgm2gwngm036kdv9b56cj35a5zvn0gb3xysq"; depends=[plyr RCurl XML]; }; + rsdmx = derive2 { name="rsdmx"; version="0.5-11"; sha256="06sjkjl9y2fg2yz740a1z5zn4afnjfv1nsykszxsnwn7s23rxi31"; depends=[plyr RCurl XML]; }; rsed = derive2 { name="rsed"; version="0.1.2"; sha256="1rk7wkidvdn1d39a11cbgglz2dg74bbv3v1ijjdx903kgwg3nnrc"; depends=[Smisc]; }; rseedcalc = derive2 { name="rseedcalc"; version="1.3"; sha256="18zmpjv6g8f7pmvqlp6khxyys9kdnq5x4zxwb6gwybsh4jxrymkp"; depends=[]; }; rsem = derive2 { name="rsem"; version="0.4.6"; sha256="16nsbp4s20396h2in0zymbpmsn24gqlbik0vgv86zhy1yg1rz9ia"; depends=[lavaan MASS]; }; rsgcc = derive2 { name="rsgcc"; version="1.0.6"; sha256="12f8xsg6abmhdgkrrc8sfzmv4i1pycq1g0jfad664d17yciw7rhh"; depends=[biwt cairoDevice fBasics gplots gWidgets gWidgetsRGtk2 minerva parmigene snowfall stringr]; }; rsggm = derive2 { name="rsggm"; version="0.3"; sha256="17yzvd5vs2avp0nzk7x9bi4d7p6n9nv7675qpgfpwkfqp25lax73"; depends=[glasso MASS Matrix QUIC]; }; rsig = derive2 { name="rsig"; version="1.0"; sha256="129k78i8kc30bzlphdb68vv3sw2k6xyiwrhw08vhzz6mf3jxlqsh"; depends=[BBmisc glmnet Matrix superpc survcomp survival]; }; + rsimsum = derive2 { name="rsimsum"; version="0.2.0"; sha256="14vx8h404sbdplqd71jawh82r937y9hap7dc2xpc246qnqd03i9f"; depends=[checkmate ggplot2]; }; rslp = derive2 { name="rslp"; version="0.1.0"; sha256="06glpdsd309058kxww114j9sshvj6gw9g5sdm4zkmzq3cl91fa6h"; depends=[magrittr plyr stringi stringr]; }; rslurm = derive2 { name="rslurm"; version="0.4.0"; sha256="1ck4ky5d0pf8hnxz1ijbjk0nfyj1hfnhf9la5qrqw2spa09z82ki"; depends=[whisker]; }; rsm = derive2 { name="rsm"; version="2.9"; sha256="1rj2qdlv44hbv1ipv7hdpssn90ypp6bfc7nqdaf9dak0bd6khwni"; depends=[estimability]; }; - rsml = derive2 { name="rsml"; version="1.3"; sha256="0a1y41jq0yzr19mb2scwhlp9gx5vngm4q12yxp1fcwk2cqhnsda6"; depends=[rgl XML]; }; rsnps = derive2 { name="rsnps"; version="0.2.0"; sha256="10g1b2i2mp0b4p78iiy83sz2jwz73xfjkhc6ih4ag2wmbdmwf9pb"; depends=[httr jsonlite plyr stringr XML]; }; rsoi = derive2 { name="rsoi"; version="0.3.0"; sha256="0syl90akbbg50pyhsa4nyq2r4psi2n6qg48a4nxprgz412n8rjbv"; depends=[dplyr lubridate readr]; }; rsolr = derive2 { name="rsolr"; version="0.0.8"; sha256="1swhg7hnkdphnw0d9jrzn18nk2v5a6ny7n652fh8d0k88a27xx4d"; depends=[BiocGenerics graph RCurl restfulr rjson S4Vectors XML]; }; rspa = derive2 { name="rspa"; version="0.2.1"; sha256="0m3h25jxfccdqy4gf3cls4wcdpw580yfmb3lvw4ndfva8lj2q6sy"; depends=[lintools validate]; }; rsparkling = derive2 { name="rsparkling"; version="0.2.2"; sha256="0ji7890ba6ry553kgffsgsqmk5lawg3jyd4y6y59a2a4ysvvwq8z"; depends=[h2o sparklyr]; }; - rsq = derive2 { name="rsq"; version="1.0"; sha256="151f7pngx54wpawb5hchacj0rbymdzyki16fkj9291cfz1cqbcx9"; depends=[MASS]; }; + rsq = derive2 { name="rsq"; version="1.0.1"; sha256="1c7604g48rcsbfk66xfwia1jaxlqsjiw19zx9pg51n8d6c0l17zb"; depends=[MASS]; }; rstack = derive2 { name="rstack"; version="1.0.0"; sha256="19vbfmkd6ymadah1y1w5rn52f4hviddccyc6qj2cv5viqwbwws2z"; depends=[R6]; }; rstackdeque = derive2 { name="rstackdeque"; version="1.1.1"; sha256="0i1qqbfj0yrqbkad8bqc1qlxmyxpn7zycbnq83cdmfbilcmi87ql"; depends=[]; }; - rstan = derive2 { name="rstan"; version="2.16.2"; sha256="0irqh4ggk23s3c0ipihwv8m0qmkxh5j7vdxgnsarhqca6254r2vb"; depends=[BH ggplot2 gridExtra inline Rcpp RcppEigen StanHeaders]; }; - rstanarm = derive2 { name="rstanarm"; version="2.15.3"; sha256="00x4ayqp31sypzhbdg6pv627w1p134qlgn7jvgxszihc7dcfb7fg"; depends=[bayesplot BH ggplot2 lme4 loo Matrix nlme Rcpp RcppEigen rstan rstantools shinystan StanHeaders]; }; + rstan = derive2 { name="rstan"; version="2.17.3"; sha256="10fdasqbdwlisnm7hjmgl5f027ypfhni86d1c5fykb09g1pvkjz3"; depends=[BH ggplot2 gridExtra inline Rcpp RcppEigen StanHeaders]; }; + rstanarm = derive2 { name="rstanarm"; version="2.17.3"; sha256="196fi09fpxf3v0kbdf6ci6f8c0mw1vx3g30cmkvl5rm17abhwifs"; depends=[bayesplot BH ggplot2 lme4 loo Matrix nlme Rcpp RcppEigen rstan rstantools shinystan StanHeaders survival]; }; rstansim = derive2 { name="rstansim"; version="0.1.1"; sha256="09hg4ishzp6q90nrl94h21al0ad0jn7fr8brp8f0xa9cvkwlzjpg"; depends=[doRNG doSNOW foreach loo Rcpp rstan]; }; - rstantools = derive2 { name="rstantools"; version="1.3.0"; sha256="080mn4yh7fhd5qww1zr6l14gfsk5d6fakm8x2lmsqkn42j2i6cw9"; depends=[]; }; + rstantools = derive2 { name="rstantools"; version="1.4.0"; sha256="1k1nhcy0d2lcnllrdslk4p2d6cp12s5v2vzl5j7l9c7l24syq2ar"; depends=[]; }; rstatscn = derive2 { name="rstatscn"; version="1.1.1"; sha256="0aj4x3lyrldpgh90v90qbxylndacn5ri5yqff3qy53q45ar7yji3"; depends=[httr jsonlite]; }; rstiefel = derive2 { name="rstiefel"; version="0.10"; sha256="0b2sdgpb3hzal34gd9ldd7aihlhl3wndg4i4b3wy6rrrjkficrl1"; depends=[]; }; rstpm2 = derive2 { name="rstpm2"; version="1.4.1"; sha256="0pgy9a8llj0zzzc06afzd0w11mdbx3xvmjf0qpzvsid1zqdbcqxr"; depends=[bbmle fastGHQuad mgcv numDeriv Rcpp RcppArmadillo survival]; }; @@ -10191,53 +10395,52 @@ in with self; { rsunlight = derive2 { name="rsunlight"; version="0.4.2"; sha256="1m4ya960zjqxbjcjj42gjmdy40ac7m471fkfsd0r6w675qbiiw87"; depends=[httr jsonlite plyr stringr]; }; rsurface = derive2 { name="rsurface"; version="1.0.2"; sha256="0lmwk8gk9h9np5fp652zvlapfdwgifarmib23dnifn5d904ia2sl"; depends=[plotly rsm]; }; rsurfer = derive2 { name="rsurfer"; version="0.2"; sha256="14zd8fhak12yha6miwb84085722v5ipk8lagijhc6af291kp70i9"; depends=[gdata stringr]; }; - rsvd = derive2 { name="rsvd"; version="0.6"; sha256="0vrsgxbbk5n51i1s80bixcxph2ws86zpbdqs81yfvnzghrc99nas"; depends=[]; }; + rsvd = derive2 { name="rsvd"; version="0.9"; sha256="1d71y4r27gpwsaq195yys301va8wdc2bvwxjk6501f7ma2yhl7y9"; depends=[]; }; rsvg = derive2 { name="rsvg"; version="1.1"; sha256="17jfspbvlfp2cdw9s4m128rqw5kvb7i5h335569n3518spqmgi4f"; depends=[]; }; rt3 = derive2 { name="rt3"; version="0.1.2"; sha256="1fqbymkz4csavkxrs26glzrh0kw3qy9x5smgddgda9a1dxh9ljkm"; depends=[]; }; rtable = derive2 { name="rtable"; version="0.1.5"; sha256="1a9x0qcbp96wg86nbvx25yh5viwvf5sqb41z3cvr5i7br2ji8n5i"; depends=[knitr ReporteRs shiny tidyr xtable]; }; rtape = derive2 { name="rtape"; version="2.2"; sha256="0q7rs7pc1k1kayr734lvh367j5qig2nnq5mgak1wbpimhl7z3wm7"; depends=[]; }; - rtdists = derive2 { name="rtdists"; version="0.7-3"; sha256="13fd49c92yh5pb3lnqf7abikp1jzzainqpbs555dg532i7f2j9zx"; depends=[evd gsl msm Rcpp]; }; + rtdists = derive2 { name="rtdists"; version="0.8-1"; sha256="0chhlnx3zppsxxwnq3h2aykdpm6zcg2nmrdgxfy14yw133fnbykf"; depends=[evd gsl msm Rcpp]; }; rtematres = derive2 { name="rtematres"; version="0.2"; sha256="1d0vrprvnlk4hl2dbc6px9xn9kx9d1qvlqxd798hzda6qg5wwvf2"; depends=[gdata plyr RCurl XML]; }; rtext = derive2 { name="rtext"; version="0.1.20"; sha256="0455rwfxmpgb4qb925ildqr4km4ndgqjxgvk90x2dhfivgmmn60k"; depends=[digest hellno magrittr R6 Rcpp RSQLite stringb]; }; rtf = derive2 { name="rtf"; version="0.4-11"; sha256="04z0s5l9qjlbqahmqdaqv7mkqavsz4yz25swahh99xfwp9plknfl"; depends=[R_methodsS3 R_oo]; }; - rtfbs = derive2 { name="rtfbs"; version="0.3.5"; sha256="0sdxlw1pkwwlzz2zcw4v8zhlm97lw2j5hbkqssialpa53jwyibyc"; depends=[rphast]; }; + rtfbs = derive2 { name="rtfbs"; version="0.3.9"; sha256="02irj6c7nfgp42yb5zdmhbr5pi09xgx0z76d1ccfczjf0r1cyvfz"; depends=[rphast]; }; rticles = derive2 { name="rticles"; version="0.4.1"; sha256="1f2a60jmlsiga377ihhy8sm9amqn7fd91sd4vx682b97hfh3zn39"; depends=[knitr rmarkdown yaml]; }; rtide = derive2 { name="rtide"; version="0.0.4"; sha256="0i3mf3818s62mmn315brv2axpwiiz646k5hv8z26z7s4ahxavrc0"; depends=[abind datacheckr lubridate magrittr plyr stringr tibble tidyr]; }; rtiff = derive2 { name="rtiff"; version="1.4.5"; sha256="0wpjp8qwfiv1yyirf2zj0696zb7m7fpzn953ii8vbmgzhakgr8kw"; depends=[pixmap]; }; rtimes = derive2 { name="rtimes"; version="0.5.0"; sha256="1z8iaxkvd99fnk46vzbw6lax2qayng6s5n1sxn78kvp8py552f61"; depends=[crul data_table dplyr jsonlite tibble]; }; rtimicropem = derive2 { name="rtimicropem"; version="1.3"; sha256="1z7nrmzwdgz7fy2i23rl07jd39sdxqsdmmmkaaxzagj7whd58inj"; depends=[changepoint dplyr ggplot2 knitr lazyeval lubridate pathological R6 rbokeh readr stringr tibble tidyr]; }; rtip = derive2 { name="rtip"; version="1.0.0"; sha256="1xkw0m4fnwbsqqyhvxhsia3hlpjb2qhs6y0c4g7f7qa7f0ibcbja"; depends=[boot ggplot2 mvtnorm plyr]; }; - rtk = derive2 { name="rtk"; version="0.2.5.3"; sha256="1jislv9kw858rv9wkj1ff6d8bfrw0h779d5yhfxw4kgb48jci6rn"; depends=[Rcpp]; }; - rtkore = derive2 { name="rtkore"; version="1.3.1"; sha256="01jxw1lhnzm25xgm90677gv247ps6x9ky2mcllnj54lsbk8j7gqj"; depends=[Rcpp]; }; - rtop = derive2 { name="rtop"; version="0.5-10"; sha256="0h35f3wpvsdvvymb2sl8g2wljzqzgis66bkf42njhxry7wavqf17"; depends=[gstat rgdal sp]; }; + rtk = derive2 { name="rtk"; version="0.2.5.4"; sha256="1nh757l4ih5pmmh7b84ca1f5wpz9mcksdb0a4rvs2hhgap38ihg9"; depends=[Rcpp]; }; + rtkore = derive2 { name="rtkore"; version="1.5.0"; sha256="15hz9cmc1i9lnifh8bbgr5r8dacn0l38zhn3ldc6wxphn7j8h075"; depends=[Rcpp]; }; + rtop = derive2 { name="rtop"; version="0.5-13"; sha256="1md9sgsmbc3jv1lc4l6r26830k9vjljjqpzzna4s23bn6ky7glgp"; depends=[gstat rgdal sp]; }; rtrends = derive2 { name="rtrends"; version="0.1.0"; sha256="04xdggf36m294drb9z8khdjr6fgsg4bwkb4mmbbvqfzjpq4mq4y1"; depends=[dplyr lubridate tidyr]; }; - rtrie = derive2 { name="rtrie"; version="0.1.1"; sha256="092ir1bm193x8ah2zbyik6vfavdqwzkda5kx4m7mv1gxcy4s64vr"; depends=[]; }; rtrim = derive2 { name="rtrim"; version="1.0.1"; sha256="134j5sv9dvcq1n37rry7615nr3pa54by6r7ss7fagcmy4lnma2ps"; depends=[]; }; rts = derive2 { name="rts"; version="1.0-38"; sha256="1m9kir2snfhxyagsflp4cyii33ycw4fr0f8bn7r92757l92i7vr7"; depends=[raster RCurl sp xts zoo]; }; rtson = derive2 { name="rtson"; version="1.3"; sha256="1gwvk7nmq9bz90jy1zh7lhr735iw804pmwxykdpaigcsnxk7zx03"; depends=[R6]; }; rtweet = derive2 { name="rtweet"; version="0.6.0"; sha256="0bh483wfl4f8xscdyv3ys5hhdabc91dynlbqlxxv8mil7pgg3chg"; depends=[bit64 httr jsonlite magrittr openssl readr tibble]; }; rtype = derive2 { name="rtype"; version="0.1-1"; sha256="0wjf359w7gb1nrhbxknzg7qdys0hdn6alv07rd9wm6zynnn1vwxy"; depends=[]; }; - rtypeform = derive2 { name="rtypeform"; version="0.3.2"; sha256="01kasx18f98gl4jsgha9w369wwq5akr99p5pk9jcpw34iwjmaxl3"; depends=[httr jsonlite purrr tibble]; }; + rtypeform = derive2 { name="rtypeform"; version="0.3.3"; sha256="13nqlgi4wwby8ka014ggilnh2m4qr940zbsks27zfd7q56ng7sbq"; depends=[httr jsonlite purrr tibble]; }; + rubias = derive2 { name="rubias"; version="0.1.0"; sha256="0k8f1aaj3zpxqkhzjfl7iyyx7pjssp5lldajjsghw110j75qksh4"; depends=[dplyr ggplot2 gtools magrittr Rcpp readr rlang stringr tibble tidyr]; }; rucm = derive2 { name="rucm"; version="0.6"; sha256="1n6axmxss08f2jf5impvyamyhpbha13lvrk7pplxl0mrrrl5g0n8"; depends=[KFAS]; }; rucrdtw = derive2 { name="rucrdtw"; version="0.1.3"; sha256="0wbh9zbgqf5bk1ix5qry18lhgdqk90pn5xnv401268gldjy4z777"; depends=[Rcpp]; }; - rugarch = derive2 { name="rugarch"; version="1.3-8"; sha256="07gynjn8lswhj6cngas864ymfkm9pj8qxia4cci3adlv9i1i6bng"; depends=[chron expm ks nloptr numDeriv Rcpp RcppArmadillo Rsolnp SkewHyperbolic spd xts zoo]; }; - ruler = derive2 { name="ruler"; version="0.1.0"; sha256="1fm82c9lxx0bifqywr4zilzagmnpghh0zg9bnkjyd5m0zm21lx14"; depends=[dplyr keyholder rlang tidyr]; }; + rugarch = derive2 { name="rugarch"; version="1.4-0"; sha256="0b0rq88v93945g7pr6xin7wfdm8zl2vw8hxwa2kfak4xnrrprsyy"; depends=[chron expm ks nloptr numDeriv Rcpp RcppArmadillo Rsolnp SkewHyperbolic spd xts zoo]; }; + ruler = derive2 { name="ruler"; version="0.1.1"; sha256="02h931ycsblwxjss9zwim4bxpqfgnyac1sblplcai085nq7fd30h"; depends=[dplyr keyholder rlang tidyr]; }; runittotestthat = derive2 { name="runittotestthat"; version="0.0-2"; sha256="15zdcvqkr5ivq6wk6dw8k6diginc6z7mdc18pswim90d99j2g9sm"; depends=[assertive RUnit]; }; runjags = derive2 { name="runjags"; version="2.0.4-2"; sha256="035sxmh0b0m6dwz8qbpsmw2p7ihkx3cxgkhj27i0j6dsjryl3x4p"; depends=[coda lattice]; }; rusda = derive2 { name="rusda"; version="1.0.8"; sha256="0xx72jjf1pyixwpnvvgx5n2vc5gl46bam1caav043iqki68wb338"; depends=[foreach httr plyr RCurl stringr taxize testthat XML]; }; - rust = derive2 { name="rust"; version="1.2.3"; sha256="13aa8hq2zzzm1ydcva1067shxasqwhyfc4mxyvp4gsspgbpf8q2n"; depends=[Rcpp RcppArmadillo spatstat]; }; + rust = derive2 { name="rust"; version="1.3.4"; sha256="1jb970kskl2wdhqcjbxl8gh986abdy96jbipnsdi3656ic5dxivn"; depends=[Rcpp RcppArmadillo spatstat]; }; ruv = derive2 { name="ruv"; version="0.9.6"; sha256="12zi775nx6k1j9sz691x6r9r0arfnhwddf5nxbr1xk25dj9qa210"; depends=[]; }; rv = derive2 { name="rv"; version="2.3.2"; sha256="108s9q19h5ypxb9w4a8nk97js261izag1sf75g4xfqblwxxrbflc"; depends=[]; }; rvHPDT = derive2 { name="rvHPDT"; version="3.0"; sha256="05nrfnyvb8ar7k2bmn227rn20w1yzkp1smwi4sysc00hyjrlyg8s"; depends=[gtools]; }; rvTDT = derive2 { name="rvTDT"; version="1.0"; sha256="09c2fbqnlwkhaxfmgpsdprl0bb447ajk9xl7qdlda201fvxkdc8v"; depends=[CompQuadForm]; }; - rvalues = derive2 { name="rvalues"; version="0.6"; sha256="075lfbqjzi103wh87i78x914iyrvrmmdz8z9f6391rbpip6bjpr3"; depends=[]; }; rvcheck = derive2 { name="rvcheck"; version="0.0.9"; sha256="14pa7fa7yyhmk0v5md7x5xr5jd4gjwjlvgbynnhq30fj56qffyvf"; depends=[]; }; rversions = derive2 { name="rversions"; version="1.0.3"; sha256="0i2gi05nrvknr7g89rbppkswyfcwwd4r9gp75fdfhpah8sgq1l11"; depends=[curl xml2]; }; rvertnet = derive2 { name="rvertnet"; version="0.6.2"; sha256="12qffkkl3yqiqh0zi4zrj6irv7jnylja7fv21h3fnjpvqwkazv8a"; depends=[crul dplyr ggplot2 jsonlite maps]; }; rvest = derive2 { name="rvest"; version="0.3.2"; sha256="04mv99z8dixywx96kfy4215g6ib23s7qvd77hcf9pxqxzcvqhvhd"; depends=[httr magrittr selectr xml2]; }; - rvg = derive2 { name="rvg"; version="0.1.6"; sha256="1cbzb4m2nj51xlfgv5wm3skwkgjmzikjnbak8dh0bmybk1i6ywmx"; depends=[gdtools officer Rcpp xml2]; }; + rvg = derive2 { name="rvg"; version="0.1.8"; sha256="03hank94b5d1spig9jzrm5h2xbipi8skwqjg8sfwxwy5sjyrbaam"; depends=[gdtools officer Rcpp xml2]; }; rvgtest = derive2 { name="rvgtest"; version="0.7.4"; sha256="1lhha5nh8fk42pckg4ziha8sa6g20m0l4p078pjj51kz0k8929ng"; depends=[]; }; - rvinecopulib = derive2 { name="rvinecopulib"; version="0.2.3.1.0"; sha256="1pwpx1byfmldgzmgqr684rbbm77sirdj8l0fqr4a02prnp8wggaz"; depends=[BH lattice Rcpp RcppEigen RcppThread]; }; + rvinecopulib = derive2 { name="rvinecopulib"; version="0.2.5.1.0"; sha256="122h7nncgkgq0qchb5apiicwx94zr40i7fwm7x1718qxi7npz8wh"; depends=[BH lattice Rcpp RcppEigen RcppThread]; }; rwalkr = derive2 { name="rwalkr"; version="0.3.2"; sha256="0vp7iizc6bn3y30vcrvksy91aiid52q01vgzjphc5m5sy99gsxj2"; depends=[dplyr httr tibble tidyr]; }; rwars = derive2 { name="rwars"; version="1.0.0"; sha256="0kmwpr6gn3xsf0pqx153vblpjbhc34mzlgyv8xb2nw78nf8znfij"; depends=[httr]; }; rwc = derive2 { name="rwc"; version="1.1"; sha256="0gdpskj87wjnpas90i3iqn1qv6frrki2xqiyyakg3zpaviw1imag"; depends=[MASS Matrix mvtnorm raster]; }; @@ -10248,12 +10451,12 @@ in with self; { rwty = derive2 { name="rwty"; version="1.0.1"; sha256="1w66jlcbn8javlr2l0qinah3cxxadpjzvbz088saysyg277ikfxm"; depends=[ape coda GGally ggdendro ggplot2 phangorn plyr reshape2 viridis]; }; rwunderground = derive2 { name="rwunderground"; version="0.1.7"; sha256="1mdqlijjximfxqd9bx4hnsayq9h3ss7fp3hr2vxx2qb60b0fjx67"; depends=[countrycode dplyr httr lubridate]; }; rxSeq = derive2 { name="rxSeq"; version="0.99.3"; sha256="0g0n2pzbssz61psghjp1vrlspgph4s39x1k1zhcz7ivdn5pjb2nx"; depends=[MASS numDeriv VGAM]; }; - rxylib = derive2 { name="rxylib"; version="0.2.0"; sha256="0x02mapz5ym9sd5cq4c077sa39ykdgn0rzmj43ws0mm9fs9li8w9"; depends=[BH Rcpp]; }; + rxylib = derive2 { name="rxylib"; version="0.2.1"; sha256="0qfdd7z9as6igc82i8dbvjz03jk8scxz599jw8xm69y5qs5zf104"; depends=[BH Rcpp]; }; ryouready = derive2 { name="ryouready"; version="0.4"; sha256="1d9z3paxcrkwsgn5g83x57jwz2iqarks30x0bwg48i5ispw6xbr3"; depends=[car ggplot2 stringr]; }; rysgran = derive2 { name="rysgran"; version="2.1.0"; sha256="1l2mx297iyipap8cw2wcw5gm7jq4076bf4gvgvij4q35vp62m85z"; depends=[lattice soiltexture]; }; rzmq = derive2 { name="rzmq"; version="0.9.3"; sha256="04rb54gr1wr0nczxnhk5jbk9ar65yn2vs8bsa41i1hfhzjhnsvxb"; depends=[]; }; - s2 = derive2 { name="s2"; version="0.1-1"; sha256="1k6329ra119ygb0z496894s4yra7f4dsg1ghpdk8k3ashd9yh6gd"; depends=[Rcpp]; }; - s20x = derive2 { name="s20x"; version="3.1-25"; sha256="1nl3cqxyx6fc0wrgnl6786qdalf637mz6fdi4m2m323j72zk67x7"; depends=[]; }; + s2 = derive2 { name="s2"; version="0.3-0"; sha256="16258mmp4rkfpqa6255s7fdd44why0vky2rxb52440fgpwic5zdq"; depends=[Rcpp]; }; + s20x = derive2 { name="s20x"; version="3.1-26"; sha256="1p931r8y4c9fac8x29sxw33q1knfjf78saj348mxddaaqrf90v1n"; depends=[]; }; s2dverification = derive2 { name="s2dverification"; version="2.8.0"; sha256="13cjzxrjwahjhdw5q8lpbwgywgswqrcnj7rkff9kraan9lj83bkk"; depends=[abind bigmemory GEOmap geomapdata mapproj maps NbClust ncdf4 plyr SpecsVerification]; }; s4vd = derive2 { name="s4vd"; version="1.1-1"; sha256="1rp3z42nxmrvb942h3c5cl544lngzx7nrnnr4zjw7dq495bym7yp"; depends=[biclust foreach irlba]; }; sAIC = derive2 { name="sAIC"; version="1.0"; sha256="1ih63cfs98kb61gwbmrx2yq7iacb5qa1qrh1a264041qd27r5pj5"; depends=[]; }; @@ -10262,8 +10465,8 @@ in with self; { sEparaTe = derive2 { name="sEparaTe"; version="0.2.1"; sha256="0k1c0wa052f1fprc9jn0i3g2cawxfhkan998jlhkr4iy986jynw9"; depends=[]; }; sExtinct = derive2 { name="sExtinct"; version="1.1"; sha256="1l6232z6c4z3cfl1da94wa6hlv9hj5mcb85fj1y0yparkvvl8249"; depends=[lattice]; }; sFFLHD = derive2 { name="sFFLHD"; version="0.1.1"; sha256="19zhx0rc6h44301a5q68r9jbxzh12ci3387d1c319vdiw05nschy"; depends=[conf_design DoE_base]; }; - sGPCA = derive2 { name="sGPCA"; version="1.0"; sha256="16aa5jgvkabrlxaf1p7ngrls79mksarh6di3vp26kb3d3wx087dx"; depends=[fields Matrix]; }; sNPLS = derive2 { name="sNPLS"; version="0.3.0"; sha256="0qb7l42hxi3sgdmc52j5hr9gz7fv5jx9qrwcyspzq671s4d1zsq1"; depends=[car ggplot2 ks MASS Matrix pbapply plotrix rgl]; }; + sRDA = derive2 { name="sRDA"; version="1.0.0"; sha256="0g11smn4adm3b79m9w7wzcragxggkf8rrrsgj2yzdhm1d7zzjwbk"; depends=[doParallel elasticnet foreach Matrix mvtnorm]; }; sROC = derive2 { name="sROC"; version="0.1-2"; sha256="0cp6frhk9ndffb454dqp8fzjrla76dbz0mn4y8zz1nbq1jzmz0d3"; depends=[]; }; sSDR = derive2 { name="sSDR"; version="1.2.0"; sha256="1fqsglqzsbzdvcdnwwf7mg6x20zfpw66x63r6avac3w1pz3n7kvx"; depends=[MASS Matrix]; }; sValues = derive2 { name="sValues"; version="0.1.4"; sha256="0y2cv3wls2y3zpbm2d098xj5n098yjl32yi7mwha6mhfwfa4y99l"; depends=[caTools ggplot2 reshape2]; }; @@ -10283,9 +10486,10 @@ in with self; { safi = derive2 { name="safi"; version="1.0"; sha256="1km58w57kdmyfj4a97zhnjcka4q4pxm8r2br01qq2niaihpbzp98"; depends=[]; }; samon = derive2 { name="samon"; version="4.0.0"; sha256="0pvv93ahh0i69ncc3sic9481wd5rv5dfxysxyzkl61ds3yvrr09v"; depends=[]; }; sampSurf = derive2 { name="sampSurf"; version="0.7-4"; sha256="0azs8d1d4cp5vzrlzpn2lbqmbha6rxq109apg6hr2hf7i81g19d7"; depends=[boot lattice latticeExtra raster rasterVis sp]; }; - sampleSelection = derive2 { name="sampleSelection"; version="1.0-4"; sha256="0by6l20hsaqvkcxpvn7lr6p2g78lb1464dygp7x4h8sq1fc4j4av"; depends=[Formula maxLik miscTools mvtnorm systemfit VGAM]; }; + sampleSelection = derive2 { name="sampleSelection"; version="1.2-0"; sha256="1s3p5fvvxkjkm6vjpxi3rw8ncbmyvqpfb0gghcvf2sspdyzam1s2"; depends=[Formula maxLik miscTools mvtnorm systemfit VGAM]; }; samplesize = derive2 { name="samplesize"; version="0.2-4"; sha256="0n6z7jmf665lbj3g1mjy87a9fh53z85546bhrkmkgsysb0r9q6iq"; depends=[]; }; samplesize4surveys = derive2 { name="samplesize4surveys"; version="3.1.2.400"; sha256="16q8pird6ic7001i3gkwqb2rlak9l853bf2m1y9njmdprsjs82yl"; depends=[TeachingSampling timeDate]; }; + samplesizeCMH = derive2 { name="samplesizeCMH"; version="0.0.0"; sha256="0gdywqmylid4fkz5syzf1wgcan71whhm9gjylmsg4p05hlwvpv1d"; depends=[]; }; samplesizelogisticcasecontrol = derive2 { name="samplesizelogisticcasecontrol"; version="0.0.6"; sha256="1xznql86r6snkkmk9g05jhdam06pr0qmg40mdzasl291nc50v5aa"; depends=[mvtnorm]; }; sampling = derive2 { name="sampling"; version="2.8"; sha256="06pj7dan0mknpsblmlnk7am78qrnwgnql5vvx7vmbfvib7rj6s9m"; depends=[lpSolve MASS]; }; samplingDataCRT = derive2 { name="samplingDataCRT"; version="1.0"; sha256="0ah3fi2sn642c8nicikhjhl1hdsjzshrf1j02swq0jaqggcqjdvk"; depends=[mvtnorm]; }; @@ -10298,6 +10502,7 @@ in with self; { sanitizers = derive2 { name="sanitizers"; version="0.1.0"; sha256="1c1831fnv1nzpq8nw9krgf9fm8v54w0gvcn4443b6jghnnbhn2n6"; depends=[]; }; sankey = derive2 { name="sankey"; version="1.0.2"; sha256="0jvcr2bn69aklfbgj4hbsrc047mymrx0jmsg26m0g6w7n1igqvcw"; depends=[simplegraph]; }; sanon = derive2 { name="sanon"; version="1.5"; sha256="1iikm7ivlz87kbq0ax9r1dz29zdq1kmhxd2imzc4hkvr1rwgciv6"; depends=[]; }; + santaR = derive2 { name="santaR"; version="1.0"; sha256="10g4z951mpxw9d21s5f6zwfch5xs9vx812fb0wyrbw9s8drmlbkh"; depends=[doParallel foreach ggplot2 gridExtra iterators pcaMethods plyr reshape2 shiny shinythemes]; }; sapa = derive2 { name="sapa"; version="2.0-2"; sha256="056xlh14dnzq4x7sbp7ff2k61jxy7110a742b502vz549qfrr5ds"; depends=[ifultools splus2R]; }; sarima = derive2 { name="sarima"; version="0.5-2"; sha256="00xlfd8hrplxn66k2nfc7ivyacrr6rqgsv9ylsjynibpidvkkn17"; depends=[FitAR FitARMA lagged ltsa PolynomF portes Rdpack]; }; sas7bdat = derive2 { name="sas7bdat"; version="0.5"; sha256="0qxlapb6wdhzpwlmzlhscy3av7va3h6gkzsppn4sx5q960310an3"; depends=[]; }; @@ -10314,7 +10519,6 @@ in with self; { sbmSDP = derive2 { name="sbmSDP"; version="0.2"; sha256="1sl46lqi6w0s7ghv4bywhic56cm2vib3kawprga760m6igargx4y"; depends=[Rcpp RcppArmadillo]; }; sbrl = derive2 { name="sbrl"; version="1.2"; sha256="1d0f2mlzzcghhvqagrr954qa69b5v47milw3iazxihh8q1qlird2"; depends=[arules Rcpp]; }; sbtools = derive2 { name="sbtools"; version="1.1.6"; sha256="1wvd7xbkfyx88bi1vz30c6jb20fgsrcgpvkw4g4ym0966vhv1ca1"; depends=[curl httr jsonlite stringr]; }; - sca = derive2 { name="sca"; version="0.9-0"; sha256="1xqdcxxsrsl8v2i8ifqcgb38vayz8ymay2sw4m9hmpma54a6r9j5"; depends=[]; }; scaRabee = derive2 { name="scaRabee"; version="1.1-3"; sha256="1yap3hi36f8hk93jn59nxrbgq8iw0xwkkm3pc2gb50cpcpaq41pd"; depends=[deSolve lattice neldermead]; }; scagnostics = derive2 { name="scagnostics"; version="0.2-4"; sha256="0fhc7d2nfhm8w6s6z1ls6i8d7c90h4q7rb92rz8pgq3xh031hpcf"; depends=[rJava]; }; scaleboot = derive2 { name="scaleboot"; version="0.3-4"; sha256="16shdj4b8pbdbphqzw7r5xzx6k2qfkr729inv21gkp9qcp4h0vrm"; depends=[mvtnorm pvclust]; }; @@ -10323,20 +10527,21 @@ in with self; { scalreg = derive2 { name="scalreg"; version="1.0"; sha256="06iqij1cyiw55ijzk2byrwh3m5iwsra7clx8l4v69rc236q8zbdi"; depends=[lars MASS]; }; scam = derive2 { name="scam"; version="1.2-2"; sha256="04w0y2l4h3xddb6mzyhf0mcx6kbphrmjyfc59cqw9z88sssfrmm7"; depends=[Matrix mgcv]; }; scan = derive2 { name="scan"; version="0.20"; sha256="1xyng9dlfmp7n2h91n4xy9lx3jm205gjiizdqk1yj1qw8mmahvqc"; depends=[nlme]; }; - scanstatistics = derive2 { name="scanstatistics"; version="1.0.0"; sha256="0mgrjkn4yhpyjv313d4arnaipv107nlcbkqzvkv6b2c97z57mpds"; depends=[dplyr emdbook gamlss_dist ismev magrittr plyr purrr Rcpp RcppArmadillo reliaR sets tibble tidyr]; }; + scanstatistics = derive2 { name="scanstatistics"; version="1.0.1"; sha256="147fhq34vqkq50bw0g3a112048s5jaxxcwm3iv5wykp8zl45msmz"; depends=[dplyr emdbook ismev magrittr plyr purrr Rcpp RcppArmadillo reliaR sets tibble tidyr]; }; scape = derive2 { name="scape"; version="2.3-1"; sha256="0maccnkhn7wf6brwnb5b7nh2yx3afx0h7kji2475mvg19909mddq"; depends=[coda Hmisc lattice]; }; scar = derive2 { name="scar"; version="0.2-1"; sha256="04x42414qxrz8c7xrnmpr00r46png2jy5giwicdx6gx8jwrkzhzs"; depends=[]; }; + scatr = derive2 { name="scatr"; version="1.0.1"; sha256="1c2z722i7d7qflh4mzb8kkix5i22wph98kwz2p98x2mhaml8802d"; depends=[cowplot ggplot2 ggridges ggstance jmvcore R6]; }; scatterD3 = derive2 { name="scatterD3"; version="0.8.1"; sha256="1fyk2z8ari73nbah2r4c677nm3v0whfia6sh39gr674cczp6vc8q"; depends=[digest ellipse htmlwidgets]; }; - scatterpie = derive2 { name="scatterpie"; version="0.0.7"; sha256="0bfzhpakdwlps900dnsp6b5hrrmi02jcmk31afp4pixyj3r7h3c8"; depends=[ggforce ggplot2 tidyr]; }; + scatterpie = derive2 { name="scatterpie"; version="0.0.8"; sha256="1dfwz83hxdms7qglsz540wszzcd5hfmjzw440c93jgi18n6kx9s4"; depends=[ggforce ggplot2 tidyr]; }; scatterplot3d = derive2 { name="scatterplot3d"; version="0.3-40"; sha256="0ababcj87kx7860mica9y2ydlhskxmgj9n46crx036cila512jc2"; depends=[]; }; scclust = derive2 { name="scclust"; version="0.1.1"; sha256="1bml4qyyspwaqxzwjhqy8i450614p3f3dj0s0qdkv6psa60h0w5z"; depends=[distances]; }; + scdensity = derive2 { name="scdensity"; version="1.0.2"; sha256="173xm3bf8vxl30zk4n451al7m003byg9q4d1l1pfyfa4xnv8qdg9"; depends=[lpSolve quadprog]; }; scdhlm = derive2 { name="scdhlm"; version="0.3.1"; sha256="1b5x4kqvmkpb8wbgfhnwqakisw6hfnvama2bsnd8kvw4alfanxhm"; depends=[nlme]; }; scenario = derive2 { name="scenario"; version="1.0"; sha256="0v1b00kiny21yx4qkk2x51cy1zqibdnd68z76qia7h5py28yhxsi"; depends=[]; }; schoRsch = derive2 { name="schoRsch"; version="1.4"; sha256="19k34i74ira71v0r5gz9rfnbadnjzi0wpxcm4zqqn7y6jpmfbd11"; depends=[]; }; scholar = derive2 { name="scholar"; version="0.1.4"; sha256="088clkpllpjv9rjb45v46dga4ig11ifvfyclgfgcgqvxy5cn92jr"; depends=[dplyr httr R_cache rvest stringr xml2]; }; schoolmath = derive2 { name="schoolmath"; version="0.4"; sha256="06gcmm294d0bs5whvknrq48sk7li961lzy4bcncjg052zbbpn67x"; depends=[]; }; schumaker = derive2 { name="schumaker"; version="1.0"; sha256="0qsbpza1x6kjs4jizg9fvhg0q5s05b5s6jv7r4fjajq9552dc83c"; depends=[]; }; - schwartz97 = derive2 { name="schwartz97"; version="0.0.6"; sha256="0l34f30l75zrg3n377jp0cw7m88cqkgzy6ql78mrx8ra88aspfzn"; depends=[FKF mvtnorm RUnit]; }; scidb = derive2 { name="scidb"; version="2.0.0"; sha256="079akdsxxjnca5jsv0grw1c2nd3dl368xhy4mzm94mh5j6ghi57l"; depends=[bit64 curl data_table digest openssl]; }; scientoText = derive2 { name="scientoText"; version="0.1"; sha256="0f18hg9s50lbbgl0fqjv45yhynpnsxj8wwm07g126snzr68gbd21"; depends=[stringr tm]; }; scifigure = derive2 { name="scifigure"; version="0.1.1"; sha256="0wfvg0c9hbdc3ipsnq6nkf7k9hf8yl27aqg012nqk9ynlwp9qa56"; depends=[]; }; @@ -10345,9 +10550,9 @@ in with self; { sclero = derive2 { name="sclero"; version="0.2"; sha256="1vqysby822s958msnwcqmz78193vrgmpf6si1jnfb9cj90hh7wgg"; depends=[plyr RImageJROI spatstat]; }; scmamp = derive2 { name="scmamp"; version="0.2.55"; sha256="17qhj9l1akxachaimy9d5rls8adph8aalj3qr6ckip29a8ma9gf7"; depends=[ggplot2 graph reshape2 Rgraphviz]; }; score = derive2 { name="score"; version="1.0.2"; sha256="1p289k1vmc7qg70rv15x05dyb92r7s6315whr1ibi40sqln62a5s"; depends=[msm]; }; - scorecard = derive2 { name="scorecard"; version="0.1.3"; sha256="144laryxla6v8w6lxyrcy0fk4jmmzw5wdjr2v7ckaykzkii3gsni"; depends=[data_table ggplot2 gridExtra]; }; + scorecard = derive2 { name="scorecard"; version="0.1.5"; sha256="1cf4cmn3csbv1l3nnr3873vszp7xb5v4864g072mwzg7xr1maj4w"; depends=[data_table ggplot2 gridExtra]; }; scorer = derive2 { name="scorer"; version="0.2.0"; sha256="1mc4hxcrqzh4dmz5fy40740bnrp4fxia81fj3cdw9382p67ivhim"; depends=[Rcpp]; }; - scoring = derive2 { name="scoring"; version="0.5-1"; sha256="0vxjcbp43h2ipc428qc0gx7nh6my7202hixwhnmspl4f3kai3wkp"; depends=[]; }; + scoring = derive2 { name="scoring"; version="0.6"; sha256="114jlpbnm15fdan5lr40adxdzwajy3yhdw6dm4kvkvky6qhcx7q5"; depends=[]; }; scoringRules = derive2 { name="scoringRules"; version="0.9.4"; sha256="0m8050qqb3j0miwfbadp6lmd2q5vicsqn4waw4jszz52fhb8mv27"; depends=[MASS Rcpp RcppArmadillo]; }; scout = derive2 { name="scout"; version="1.0.4"; sha256="0vr497g7g1xhf75cwjbjsns2fvdzy86iibbf5w0g2xylw82s4lh2"; depends=[glasso]; }; scpm = derive2 { name="scpm"; version="1.0-2"; sha256="0jrr90lcalchfqmq5c8ja7ws88rpri3gjdc5z4jfpazn2vznx26n"; depends=[geoR interp lattice MASS Matrix mvtnorm RandomFields rgl]; }; @@ -10356,41 +10561,42 @@ in with self; { scrime = derive2 { name="scrime"; version="1.3.3"; sha256="1vp7ai10m0f3s0hywyqh0yllxj6z6p795zqpr6vp58fh6yq20x73"; depends=[]; }; scriptests = derive2 { name="scriptests"; version="1.0-16"; sha256="11l145gvzkxqwbzw976rq94krly1p4lahqw051dwaacarq4hnrdg"; depends=[]; }; scriptexec = derive2 { name="scriptexec"; version="0.2.1"; sha256="09gaccqadb51ia66xk9vi3p9472s82bg6v8i6ba390g04yipbipi"; depends=[]; }; - scrm = derive2 { name="scrm"; version="1.7.2-0"; sha256="1i4mdymds8xmxcxzc7a9lcmy2q11gmdgnfbm2hircf07j5pbb2d8"; depends=[Rcpp]; }; + scrm = derive2 { name="scrm"; version="1.7.2-1"; sha256="123rxx1a13fbv975hp9f9rjcigp8vfai7679wbn9dlyvph5nivaz"; depends=[Rcpp]; }; scrubr = derive2 { name="scrubr"; version="0.1.1"; sha256="0dqsk6vvc79qmjcr1gdksqzbd064nkyqfj2mxg6z7aifqgxs8zzz"; depends=[lazyeval magrittr Matrix qlcMatrix]; }; - scrypt = derive2 { name="scrypt"; version="0.1.1"; sha256="0lgnmag2yr5r67kqni2mpbvflqzaq8icilcxqja7c8fzw6xxzjrx"; depends=[Rcpp]; }; scs = derive2 { name="scs"; version="1.1-1"; sha256="1qx8b73g5v7mjx85lx5bln6j6i9r7m238i7hm8adr2jrbl33532y"; depends=[Matrix]; }; scuba = derive2 { name="scuba"; version="1.9-1"; sha256="1b92b6p9dn54rmcaw2ng41pvvvkmrzgg12d6zcr3yh8qgi89pvdi"; depends=[]; }; sdPrior = derive2 { name="sdPrior"; version="0.3"; sha256="0d3w75p3r2h07xhp7fj4si1y4sav8vs0lq6h2h4fn4f2inn3l0vl"; depends=[caTools GB2 MASS]; }; sda = derive2 { name="sda"; version="1.3.7"; sha256="1v0kp6pnjhazr8brz1k9lypchz8k8gdaby8sqpqzjsj8klghlcjp"; depends=[corpcor entropy fdrtool]; }; sdat = derive2 { name="sdat"; version="1.0"; sha256="1rp2s3y44f3vj0p16j1k2rrs44kmnzy9k0lpcm9ga801nbv93saz"; depends=[]; }; - sdcMicro = derive2 { name="sdcMicro"; version="5.0.4"; sha256="169b75i7mapjb90slkx88vwxy39mw4gjsngccly3hhcs08y2vqz2"; depends=[car cluster data_table DT e1071 ggplot2 haven knitr MASS prettydoc Rcpp rhandsontable rmarkdown robustbase sets shiny shinyBS VIM xtable]; }; + sdcMicro = derive2 { name="sdcMicro"; version="5.1.0"; sha256="06rnnm5g7rpbbxgdb9sl7gkcimdbx1qmgzg5d2n0jl4b81jac2n2"; depends=[car cluster data_table DT e1071 ggplot2 haven knitr MASS prettydoc Rcpp rhandsontable rmarkdown robustbase sets shiny shinyBS VIM xtable]; }; sdcTable = derive2 { name="sdcTable"; version="0.22.8"; sha256="134a0g1v5w9airckn1bqp4k7hv2dcl5kmb1hx78nw5s8h92y3gkc"; depends=[data_table lpSolveAPI Rcpp Rglpk slam stringr]; }; sdcTarget = derive2 { name="sdcTarget"; version="0.9-11"; sha256="18cf276mh1sv16xn0dn8par4zg8k7y8710byxiih6db4i616fjpi"; depends=[doParallel foreach magic tuple]; }; sddpack = derive2 { name="sddpack"; version="0.9"; sha256="1963l8jbfwrqhqcpif73di9i5mb996r4f8smjyil6l7sdir7cg9l"; depends=[]; }; sde = derive2 { name="sde"; version="2.0.15"; sha256="0gxyhq9lafd62y68h7fd746a3jz3jdsm0shgwm2ylmp4a2f5cdmm"; depends=[fda MASS zoo]; }; sdef = derive2 { name="sdef"; version="1.6"; sha256="1y1l5fl7lh636kyvc2hwssdnifl055nrz3riplj4qqw88lkm1mk8"; depends=[]; }; - sdm = derive2 { name="sdm"; version="1.0-41"; sha256="083agia8091k0c44alrpxm9qqz74f1i9xycaxkfj7f626p8f6qjj"; depends=[raster sp]; }; sdmpredictors = derive2 { name="sdmpredictors"; version="0.2.6"; sha256="1kbgv5x5ilzccafl20x86fi9f7jqxnccvb8k7dy8q41s9n36qwfs"; depends=[R_utils raster rgdal]; }; sdmvspecies = derive2 { name="sdmvspecies"; version="0.3.2"; sha256="19avkag13ij1k65vqhmvcy8j50j8vrgw4mjc49x8i63w3d4z1wxh"; depends=[psych raster]; }; sdnet = derive2 { name="sdnet"; version="2.3.8"; sha256="10c962wbzgl2zpz7yx5kpryldbbq76qrd5pnz4rlmbaa9kfg08s5"; depends=[]; }; + sdols = derive2 { name="sdols"; version="1.4"; sha256="1wamzpw8q55a5zkvk21c3hilr97lxz1yq3b0dcfgcdvcqap2i14w"; depends=[commonsMath rscala]; }; sdprisk = derive2 { name="sdprisk"; version="1.1-5"; sha256="1c6mipq8sh8347i7m7dh47f69fr21xkrsk8yjgsdvcy41h8zijmf"; depends=[numDeriv PolynomF rootSolve]; }; sdpt3r = derive2 { name="sdpt3r"; version="0.1"; sha256="06mw1h6c8gkhi3vhal17h7px3bb277xz15k2ryqjwc7agzwhmv8c"; depends=[Matrix]; }; sdtoolkit = derive2 { name="sdtoolkit"; version="2.33-1"; sha256="0pirgzcn8b87hjb35bmg082qp14idc5pfvm6dikpgkswag23hwh8"; depends=[]; }; sdwd = derive2 { name="sdwd"; version="1.0.2"; sha256="0l0w4jn2p9b7acp8gmlv4w8n662l397kbrm4glslik0vnmjv151w"; depends=[Matrix]; }; - seacarb = derive2 { name="seacarb"; version="3.2.2"; sha256="1y2mkkxc8135h2i0jbc46gs4bgj1nvnmw2si1h14npp4z3wa2qml"; depends=[gsw oce]; }; + seaaroundus = derive2 { name="seaaroundus"; version="1.2.0"; sha256="09nyypzylb0y04ssd9ak2cw8wpy6a3nmabg9p7jrc8qz54wl6z4q"; depends=[crul ggplot2 jsonlite maps rgdal scales sp wicket]; }; + seacarb = derive2 { name="seacarb"; version="3.2.4"; sha256="06r4grcdvm252nnln03pzqll9xqx1r3piaaxi81vfzs4w6gq1c94"; depends=[gsw oce]; }; sealasso = derive2 { name="sealasso"; version="0.1-2"; sha256="0cjy3fj170p5wa41c2hwscmhqxwkjq22vhg9kbajnq7df2s20jcp"; depends=[lars]; }; - searchConsoleR = derive2 { name="searchConsoleR"; version="0.2.1"; sha256="1hf87x3jfwl12d1gspnrgpzh90hpci5gh54hasi6bx6z8xw44ssb"; depends=[googleAuthR stringr]; }; + searchConsoleR = derive2 { name="searchConsoleR"; version="0.3.0"; sha256="1z8bdlxq2sk8bcg164wy0yrmsx0inf0aj5ya2pybvadss8wr0qlr"; depends=[googleAuthR stringr]; }; searchable = derive2 { name="searchable"; version="0.3.3.1"; sha256="0xc87i2q42j7dviv9nj4hkgjvpfiprkkjpgzwsy47vp7q8024dv0"; depends=[magrittr stringi]; }; + searcher = derive2 { name="searcher"; version="0.0.2"; sha256="0lj7zyqldr8m7ky20frzaxmf9by2h3p89ibwsa7dyrf378swkwwj"; depends=[]; }; seas = derive2 { name="seas"; version="0.4-3"; sha256="1n0acg6fvaym4nx1ihw0vmb79csds0k4x9427qmcyxbl9hxxmllp"; depends=[]; }; season = derive2 { name="season"; version="0.3-5"; sha256="08f382kq51r5g9p5hsnjf17dwivhx1vfgmmwp1vzmbqx1drlqkzx"; depends=[coda ggplot2 MASS mgcv survival]; }; seasonal = derive2 { name="seasonal"; version="1.6.1"; sha256="1nvavn84f2zb0f6n352br52wcrcmnxv6vprzcpymrnzik7pyp8y6"; depends=[x13binary]; }; seasonalview = derive2 { name="seasonalview"; version="0.3"; sha256="1l705yc7ssldsfckbgnvd95sh3zzhpkmf1rr6ar2s60s3wsyly4n"; depends=[dygraphs htmlwidgets openxlsx seasonal shiny shinydashboard xtable xts zoo]; }; seawaveQ = derive2 { name="seawaveQ"; version="1.0.0"; sha256="19vm1f0qkmkkbnfy1hkqnfz6x2a7g9902ka76bhpcscynl69iy56"; depends=[lubridate NADA survival]; }; - secr = derive2 { name="secr"; version="3.1.0"; sha256="0g2fmfbxf69jy2r8adw0hpwhb3a3s9ya9vzjw91l84rid50l4900"; depends=[abind MASS mgcv nlme raster sp]; }; - secrdesign = derive2 { name="secrdesign"; version="2.5.2"; sha256="0c2lgmc4gcjys9q130p30sj1r0k6xa4g8wsm6nj53fhlp1yb2xfl"; depends=[abind secr]; }; + secr = derive2 { name="secr"; version="3.1.3"; sha256="0py8qk141q0h8pkw40w3l4pjhwpn8pa8k2s8qgligvnnmyzp7z00"; depends=[abind MASS mgcv nlme raster sp stringr]; }; + secrdesign = derive2 { name="secrdesign"; version="2.5.4"; sha256="1kbqgdjpyns11ag16rgw9n6mvmjgdypk9lv3yzwf4kynds46wbbk"; depends=[abind secr]; }; secret = derive2 { name="secret"; version="1.0.0"; sha256="09b28f7ndc167bbanbdydralykq718fixnrgs5xr9d3fbdhz1vdl"; depends=[assertthat curl jsonlite openssl rprojroot]; }; - secrlinear = derive2 { name="secrlinear"; version="1.1.0"; sha256="0crzpsm8c42v8r0xf9rnrxcinjh22sywgv7cc3pq5s5l2526d5dj"; depends=[igraph maptools MASS rgdal secr sp]; }; + secrlinear = derive2 { name="secrlinear"; version="1.1.1"; sha256="0jcvraypkss1gphh4cjb0b4v9460fj4dw80yd057ah11p9942ggs"; depends=[igraph maptools MASS rgdal secr sp]; }; secure = derive2 { name="secure"; version="0.5"; sha256="16pv5m7rrcs8hcjj3kylq7smyzf2qk8rkg9m1b421w0ac7lg04x1"; depends=[MASS Rcpp RcppArmadillo]; }; securitytxt = derive2 { name="securitytxt"; version="0.1.0"; sha256="117xmhclv219ci8vki8ni8yqvlnwgj0pd8n0r752wd8333y130wr"; depends=[Rcpp]; }; seeclickfixr = derive2 { name="seeclickfixr"; version="1.1.0"; sha256="1agsqq2msrqrssffc6liyjjs6nqm90xy2inlcjbkdac5dhinjc4n"; depends=[jsonlite RCurl]; }; @@ -10399,7 +10605,7 @@ in with self; { seewave = derive2 { name="seewave"; version="2.0.5"; sha256="1ml0jcqb6i6v0xgarvzg51rgax6lsf6y2255jq1kfz4v8n39vnh0"; depends=[tuneR]; }; seg = derive2 { name="seg"; version="0.5-1"; sha256="0gsdbq7b5wpknhlilrw771japr63snvx4vpirvzph4fjyby1c7rg"; depends=[sp splancs]; }; segmag = derive2 { name="segmag"; version="1.2.4"; sha256="1i717xg1z7s35pkwzywgjf9wx7zj9xksv0k87h7p1q62y073qbqm"; depends=[plyr Rcpp]; }; - segmented = derive2 { name="segmented"; version="0.5-2.2"; sha256="1wdjxkgqjqw5q2nywmgkf6y21lb0alhvaqg0m0dr2xyxf1ii79rs"; depends=[]; }; + segmented = derive2 { name="segmented"; version="0.5-3.0"; sha256="0nrik5fyq59hwiwjcpbi4p5yfavgfjq6wyrynhkrbm4k6v1g1wlq"; depends=[]; }; seismic = derive2 { name="seismic"; version="1.0"; sha256="02d11c3filzghi8cvryikaidmk40d4z3qxsqs7bjdhxyf814caw8"; depends=[]; }; seismicRoll = derive2 { name="seismicRoll"; version="1.1.2"; sha256="183lx9lgmi06lv1l4gbmlmblfgjzhph4aavdnxrykpp6122hsq61"; depends=[Rcpp]; }; sejmRP = derive2 { name="sejmRP"; version="1.3.4"; sha256="1j3sadbp12fip3n96s0hx1sg4kzwx8z01p1c905kv8gffhkz9bh0"; depends=[cluster DBI dplyr factoextra RPostgreSQL rvest stringi tidyr XML xml2]; }; @@ -10421,14 +10627,15 @@ in with self; { semdiag = derive2 { name="semdiag"; version="0.1.2"; sha256="0kjcflw7dn907zx6790w7hnf5db6bf549whfsc0c2r173kf13irp"; depends=[sem]; }; semds = derive2 { name="semds"; version="0.9-2"; sha256="0ig8b7ii1c8av0il904b71lzr8lqdiibwf16yj5dp8n4xc80bryh"; depends=[minpack_lm pracma]; }; semiArtificial = derive2 { name="semiArtificial"; version="2.2.5"; sha256="1m8kwjhqjpqjzz22caiwpb4nb70d8y0ssf9j4rfyyh530x2q2k1m"; depends=[cluster CORElearn flexclust fpc ks logspline MASS mcclust nnet robustbase RSNNS StatMatch timeDate]; }; + seminr = derive2 { name="seminr"; version="0.4.0"; sha256="1vgmakj94s0l400wmk31hq8xl75dnhpbmdn85px6lsm1jhp6l8i5"; depends=[]; }; semisupKernelPCA = derive2 { name="semisupKernelPCA"; version="0.1.5"; sha256="1v8wdq63b1gqicj8c9a24k0w7cc0bkg0mnc9z5mklsfcl7g0g6k9"; depends=[datautils irlba]; }; semsfa = derive2 { name="semsfa"; version="1.0"; sha256="1x227rigjk9glq5x9lp6xxcf3y9i73rv3mrj7lkr2ycnsx8zz57h"; depends=[doParallel foreach iterators mgcv moments np]; }; - semtree = derive2 { name="semtree"; version="0.9.10"; sha256="1xx86pqzilxpd6zki7zd846vf13dcphn9d478hjjn2zlvzlxhfkz"; depends=[bitops digest OpenMx rpart rpart_plot sets]; }; + semtree = derive2 { name="semtree"; version="0.9.12"; sha256="07i82f3bnn9x7gy8gsjyd99mzcq9pk3xqb3479d338vpky2afv43"; depends=[bitops cluster digest OpenMx plotrix rpart rpart_plot sets]; }; semver = derive2 { name="semver"; version="0.2.0"; sha256="10wpkyms2cix3bsin2q0qhkbl445pwwpa5gm2s4jjw1989namkxy"; depends=[assertthat Rcpp]; }; sendmailR = derive2 { name="sendmailR"; version="1.2-1"; sha256="0z7ipywnzgkhfvl4zb2fjwl1xq7b5wib296vn9c9qgbndj6b1zh4"; depends=[base64enc]; }; sendplot = derive2 { name="sendplot"; version="4.0.0"; sha256="0ia2xck94nwirwxi38nv0viz5wb8291yiak6f0wgwh84irsrfp1h"; depends=[rtiff]; }; sensR = derive2 { name="sensR"; version="1.5-0"; sha256="01rs0kiv73rqrlgzwf7hnprb029i5sq1h1qjb9q3879jxj4823pf"; depends=[MASS multcomp numDeriv]; }; - sensiPhy = derive2 { name="sensiPhy"; version="0.7.0"; sha256="18sps4nqr38bc2bsy8zq6yq45asd3s88daal7j2lz2ca6wxn5hgp"; depends=[ape caper ggplot2 phylolm phytools]; }; + sensiPhy = derive2 { name="sensiPhy"; version="0.8.1"; sha256="0pqwxs36g31qvy8ygx5grsx782magwsmh3v2qkv3rn2ycwy3brgp"; depends=[ape caper geiger ggplot2 phylolm phytools]; }; sensitivity = derive2 { name="sensitivity"; version="1.15.0"; sha256="02vqs1pqzivxpg2ql3wi0530cshdkz7hxvablpd1dzhvjnindknm"; depends=[boot]; }; sensitivity2x2xk = derive2 { name="sensitivity2x2xk"; version="1.01"; sha256="1r829k939zzmi0j4chdaniajchcflmmjrl3a9hwnkg0wkfnjbvdl"; depends=[BiasedUrn mvtnorm]; }; sensitivityPStrat = derive2 { name="sensitivityPStrat"; version="1.0-6"; sha256="0rfzvkpz7dll3173gll6np65dyb40zms63fkvaiwn0lk4aryinlh"; depends=[survival]; }; @@ -10439,16 +10646,16 @@ in with self; { sensors4plumes = derive2 { name="sensors4plumes"; version="0.9"; sha256="1fyf020bl6p9wdvnsfkmdlllhdwj3l4h9h2paq9dwd7hsr7av48p"; depends=[automap conf_design emdist FNN genalg gstat lattice raster rgdal sp]; }; sensory = derive2 { name="sensory"; version="1.1"; sha256="1zd0ajrymxi6gygcq9fqgwgy0g6c3cqz53x0k5m0ihbmh11rc7s7"; depends=[gtools MASS Matrix]; }; senstrat = derive2 { name="senstrat"; version="1.0.3"; sha256="0j6mb55v5ivqvk8nn8fjlzrbdgj6csa58yc6gy1g07m7gk2qz2np"; depends=[BiasedUrn MASS]; }; - sentimentr = derive2 { name="sentimentr"; version="2.0.1"; sha256="09sjd1fyls6yzb7sd6sz0cr9qjzyxgssnsb3b3wrvm5k4mgpsvlw"; depends=[data_table ggplot2 lexicon stringi syuzhet textclean textshape]; }; + sentimentr = derive2 { name="sentimentr"; version="2.2.3"; sha256="0f9hwiyja9cgig0ja9miqzsfwpn25bfa8xrwfm34v1n2l3v2gbxv"; depends=[data_table ggplot2 lexicon stringi syuzhet textclean textshape]; }; sentometrics = derive2 { name="sentometrics"; version="0.2"; sha256="0pndbas1xya2pnriil94r0pp6zjd44flhsqimdgmi7w5k87wlabf"; depends=[abind caret data_table foreach ggplot2 ggthemes glmnet ISOweek MCS quanteda Rcpp RcppArmadillo RcppRoll sentimentr stringi zoo]; }; + seoR = derive2 { name="seoR"; version="0.1.0"; sha256="0aa74a9vi176ap4ap44sjm8lm3025dss067sm5lgc4b73a6ph75p"; depends=[digest dplyr httr igraph jsonlite RCurl readr robotstxt rvest stringr XML xml2]; }; separationplot = derive2 { name="separationplot"; version="1.1"; sha256="0qfkrk8n6jj8l7ywngwsaikfwmd9hbrpr43x0l9wkjjp1asgs5l6"; depends=[]; }; - seplyr = derive2 { name="seplyr"; version="0.5.0"; sha256="0883lfkkqxdli6caz2i757sdflpjbdmpb683ykpfrw5yn8cclbns"; depends=[dplyr rlang wrapr]; }; + seplyr = derive2 { name="seplyr"; version="0.5.3"; sha256="0xk3pqirgz49y94nk5karb939xbg7zxfalm1pkaj603arpi8y6am"; depends=[DBI dbplyr dplyr rlang RSQLite wrapr]; }; seqCBS = derive2 { name="seqCBS"; version="1.2"; sha256="1kywi3kvvl9y6nm7cwf6fj8gz9gzznp5va336g1akzgy77k82d8v"; depends=[clue]; }; seqDesign = derive2 { name="seqDesign"; version="1.1"; sha256="1694swd8ik9fbiflmnw4xpq82kq18rqzkw0dv5pvq30c47xjgamv"; depends=[survival xtable]; }; seqHMM = derive2 { name="seqHMM"; version="1.0.8"; sha256="1zr70ym32isav13wsb7zv4gv3bn04qi0dn5k0fqjbdcw36m5hfi8"; depends=[gridBase igraph Matrix nloptr numDeriv Rcpp RcppArmadillo TraMineR]; }; seqICP = derive2 { name="seqICP"; version="1.1"; sha256="1dfhl7g47icjw38p9c0hyvnn3pwzw7pndywk22vgcyfhiz23xjcp"; depends=[dHSIC mgcv]; }; seqMeta = derive2 { name="seqMeta"; version="1.6.7"; sha256="11dscdrlnk5jzg0q2g59qis4xjr4xs86bi463jmhq53n9gsb4i1l"; depends=[CompQuadForm coxme Matrix survival]; }; - seqPERM = derive2 { name="seqPERM"; version="1.0"; sha256="1i8ai4gxybh08wxjh96m6xlqxhh7ch0xihjs879snmy4zqfi0pap"; depends=[]; }; seqRFLP = derive2 { name="seqRFLP"; version="1.0.1"; sha256="1i98hm8wgwr8b6hd237y2i9i0xgn35w4n2rxy4lqc5zq71gkwkvk"; depends=[]; }; seqinr = derive2 { name="seqinr"; version="3.4-5"; sha256="17zv0n5cji17izwmwg0jcbxbjl3w5rls91w15svcnlpxjms38ahn"; depends=[ade4 segmented]; }; seqminer = derive2 { name="seqminer"; version="6.0"; sha256="057j1l6dip35l1aivilapl2zv9db677b3di2pb3sfgq2sxg0ps3l"; depends=[]; }; @@ -10459,43 +10666,43 @@ in with self; { sequoia = derive2 { name="sequoia"; version="0.9.3"; sha256="1lxq88bw5fbm2afdh79fs363dvb1c2jsz02dc6c0ndwkwch04igc"; depends=[plyr]; }; sergeant = derive2 { name="sergeant"; version="0.5.2"; sha256="02chkyvmwd4nimw62v82rfbid1xqw5b1335na44pdi675g904250"; depends=[DBI dbplyr dplyr htmltools httr jsonlite purrr readr scales]; }; serial = derive2 { name="serial"; version="1.3"; sha256="1ibwd8xmkd0pwdhivm6h3yd3rsi28mai5n7qcs1bq2mx8hb5lg7f"; depends=[]; }; - seriation = derive2 { name="seriation"; version="1.2-2"; sha256="1b6glraxi5zrqzihnh39bbdnzsbd925r9hjpi020d470266g2c8f"; depends=[cluster colorspace dendextend gclus gplots MASS qap registry TSP]; }; + seriation = derive2 { name="seriation"; version="1.2-3"; sha256="1q6hw4hjw224b4y0dc0j630v2pgj6sn455nwkilb70w8k31hpk92"; depends=[cluster colorspace dendextend gclus gplots MASS qap registry TSP]; }; seroincidence = derive2 { name="seroincidence"; version="1.0.5"; sha256="07lphrp7r3i87633q8g6svk2mxbsvq4blrf8gnm0p99hkmz8wgg9"; depends=[]; }; + serrsBayes = derive2 { name="serrsBayes"; version="0.3-12"; sha256="137pm5s7w6fxaalyc7hzvdkg7rayjhqw2dnb2q8q9ijp0v9wx7mr"; depends=[MASS Matrix Rcpp RcppEigen truncnorm]; }; servr = derive2 { name="servr"; version="0.8"; sha256="05pz4ychqp4cqywcdavdi8jj3y09gmam097d2idjnlcg9x61h2s9"; depends=[httpuv jsonlite mime]; }; sesem = derive2 { name="sesem"; version="1.0.2"; sha256="0b1xzv38wpkhhlq87xrvlh45b8ksbi8bg4ar5hrf8gxa19r9rmi5"; depends=[gplots lavaan mgcv]; }; session = derive2 { name="session"; version="1.0.3"; sha256="04mcy1ac75fd33bg70c47nxqxrmqh665m9r8b1zsz5jij1sbl8q5"; depends=[]; }; sessioninfo = derive2 { name="sessioninfo"; version="1.0.0"; sha256="00g3lbvk1cjjzckl70fn5n3579qb301im4lbm3cip5c2v8k283dk"; depends=[clisymbols withr]; }; setRNG = derive2 { name="setRNG"; version="2013.9-1"; sha256="02198cikj769yc32v8m2qrv5c01l2fxmx61l77m5ysm0hab3j6hs"; depends=[]; }; - sets = derive2 { name="sets"; version="1.0-17"; sha256="1ib7wyzrdadxz7d29prr0k0dpx8yqgj9b1rnjn6lankjdlw7m08p"; depends=[]; }; + sets = derive2 { name="sets"; version="1.0-18"; sha256="16v7650p47khqrbbw0z98llmwmmhswqmhri0n7nrfhdqwmby1lbl"; depends=[]; }; setter = derive2 { name="setter"; version="0.0-1"; sha256="10fwrx8yysp99rrkbnn3rbz79vyzr2h3p7zxxlqapw1k2lllp0r5"; depends=[assertive_base]; }; settings = derive2 { name="settings"; version="0.2.4"; sha256="092sv6nccm6p2d695l9w0zfi2xgymk12c8p8lhl9nb86mxrb3nry"; depends=[]; }; severity = derive2 { name="severity"; version="2.0"; sha256="1mp19y2pn7nl9m8xfljc515kk5dirv0r2kypazpmd956lcivziqq"; depends=[]; }; - sf = derive2 { name="sf"; version="0.5-5"; sha256="0a92qvz5s0n31v0cq4zjbxp59l6qw3k5w97y08iridj3hbwk3bc2"; depends=[classInt DBI magrittr Rcpp units]; }; + sf = derive2 { name="sf"; version="0.6-0"; sha256="0g6ghmjpxvlpi2sgvcxb6dx74pl7nc70cr8lgslrnv0fhnjr49jk"; depends=[classInt DBI magrittr pillar Rcpp units]; }; sfa = derive2 { name="sfa"; version="1.0-1"; sha256="1acqxgydf8j5csdkx0yf169x3yaa31r0ccdrqarh6vj1hacm89ad"; depends=[]; }; sfadv = derive2 { name="sfadv"; version="1.0.1"; sha256="1rfpm6km5pckwhqgpvidm6qsj5sjdaqqj5b0sgvpslivfa4c80cr"; depends=[gmm minpack_lm]; }; sfc = derive2 { name="sfc"; version="0.1.0"; sha256="0cm4mfcfd9bhf2j5fppsihzrfipnldb6q3xradd88z9pwgrkfx2a"; depends=[dplyr sna tidyr triangle zoo]; }; - sfdct = derive2 { name="sfdct"; version="0.0.4"; sha256="0q392wgdlv2fdksk2rwqjqddxrzgkr3pg1czzqywr3l07pl7gxbj"; depends=[dplyr RTriangle sf sp tibble]; }; + sfdct = derive2 { name="sfdct"; version="0.0.5"; sha256="02di504pcv423wk40ap8k18b2q759x8f5wsp8kkbwks54j42s69a"; depends=[dplyr RTriangle sf sp tibble]; }; sfinx = derive2 { name="sfinx"; version="1.7.99"; sha256="14v47y00qwvc2s0vzjw19hwn85nzj8lna539c75qq6zkn6kir6va"; depends=[]; }; sfsmisc = derive2 { name="sfsmisc"; version="1.1-1"; sha256="0jzmbywlyzfxs7hlmyd0iynghfc9qp5sa5lnhr73y8r360yv1ahf"; depends=[]; }; - sft = derive2 { name="sft"; version="2.0-7"; sha256="1fq1b32f08i4k9bv4hh7rhk1jj7kgans6dwh1bmawaqkchyab3jr"; depends=[fda]; }; + sft = derive2 { name="sft"; version="2.2-0"; sha256="0d1yiimc899i09yyrv1x40ixqss87xjpy08ab16h9faxd4bsk3y2"; depends=[fda SuppDists]; }; sgPLS = derive2 { name="sgPLS"; version="1.7"; sha256="1jk2j1zn5vq82rcjflnk7g6y2q0v5jl14k804dmigqg013gbykql"; depends=[mixOmics mvtnorm]; }; sgRSEA = derive2 { name="sgRSEA"; version="0.1"; sha256="0vyypnq81l36x0j44q2l9wbf3x4krz4fzypi7vyqhaq97mkzaw5j"; depends=[]; }; - sgd = derive2 { name="sgd"; version="1.1"; sha256="1kqpaxyacaq1fkmy4hsj62167gcmqng4pmafpdjdpqxwdqxz9xxf"; depends=[BH bigmemory ggplot2 MASS Rcpp RcppArmadillo]; }; - sgee = derive2 { name="sgee"; version="0.5-0"; sha256="040llsmgwdvq8qr02zh4vnpvyqs8zsbla4qrdrjpcmv9ja52ppb9"; depends=[copula mvtnorm]; }; + sgee = derive2 { name="sgee"; version="0.6-0"; sha256="055iydainzywb1s5id5rl9i94dj5arr9b6qz15p8wps49vm2mlp3"; depends=[copula mvtnorm]; }; sgeostat = derive2 { name="sgeostat"; version="1.0-27"; sha256="1iq9p2jk8bpv1h853a1l91d5c5dxnhkk3cmkd01siqqvj04hv4vb"; depends=[]; }; sglOptim = derive2 { name="sglOptim"; version="1.3.6"; sha256="0gzhzfi5q9hgqgzagfdzi4cswpmwic9ggf72qi6axl1hixgmgp0w"; depends=[BH doParallel foreach Matrix Rcpp RcppArmadillo RcppProgress]; }; sglasso = derive2 { name="sglasso"; version="1.2.2"; sha256="1yk9wvg98a2l9kdaksy75av9z9iz27v5d2zpsqhabqwkwfh6wkad"; depends=[igraph Matrix]; }; - sglg = derive2 { name="sglg"; version="0.1.1"; sha256="110w4n3imx9ar9g57ckbbb6hm5sqyg2syh7g2d4nyzijh2pmcyd4"; depends=[Formula robustloggamma ssym survival]; }; + sglg = derive2 { name="sglg"; version="0.1.2"; sha256="0wqjw466j3j5ipjgp18978g7fwb2fvzxhfv2bp4dqdazmxrjyyqm"; depends=[Formula robustloggamma ssym survival]; }; sglr = derive2 { name="sglr"; version="0.7"; sha256="11gjbvq51xq7xbmpziyzwqfzf4avyxj2wpiz0kp4vfdj3v7p4fp9"; depends=[ggplot2 shiny]; }; sgmcmc = derive2 { name="sgmcmc"; version="0.2.0"; sha256="1jqk6bic8g5zsdxa9f6w6j6ha6dnghfdi61cyy9vi94xsmkbkv66"; depends=[tensorflow]; }; sgof = derive2 { name="sgof"; version="2.3"; sha256="12bpyvg5df1m2ar6frpi10zlj3dk9h61r13rzn3w5a3nyk8gljsg"; depends=[poibin]; }; sgr = derive2 { name="sgr"; version="1.3"; sha256="0zxmrbv3fyb686hcgfy2w1w2jffxf41ab8yc90dsgf931s9c55wn"; depends=[MASS]; }; sgt = derive2 { name="sgt"; version="2.0"; sha256="0qb3maj5idwafs40fpdfrwzkadnh5yg8fvfzfs51p9yy69kbmlkx"; depends=[numDeriv optimx]; }; - shades = derive2 { name="shades"; version="0.2.0"; sha256="1r2xbz1h144pg53g3ayy7n08091gv5zj52p02gv7kihir2kzxj0w"; depends=[]; }; - shadow = derive2 { name="shadow"; version="0.4.0"; sha256="14alr3sn4w8r2cqf22k6kqr84yj5vjmjm4cw4rz9zzx9s5182i51"; depends=[raster rgeos sp]; }; + shades = derive2 { name="shades"; version="1.1.0"; sha256="0ajdpwisfax96mc3w1akjlkk36b6gni1aprxqvqlwlw8bmgsmj4p"; depends=[]; }; + shadow = derive2 { name="shadow"; version="0.4.5"; sha256="00g82dwzmawb6v7x9sphs7vmmpjmzb4mvhw76x96wnasskqlrcpc"; depends=[raster rgeos sp]; }; shadowtext = derive2 { name="shadowtext"; version="0.0.2"; sha256="17ccylxnl6837cf81fwkgywjmqizmcm6mhqak10sl5apnqm5n1nl"; depends=[ggplot2]; }; shallot = derive2 { name="shallot"; version="0.4.3"; sha256="1rxx15qma6sbi4h2iv90ym4r22lwh64z495psrxv624w1zjypbvf"; depends=[commonsMath rscala]; }; - shape = derive2 { name="shape"; version="1.4.3"; sha256="1v9xp60p813rnx41vchkh32qmcb4z2zp9l7r1a8a6f8aqylnq3vj"; depends=[]; }; + shape = derive2 { name="shape"; version="1.4.4"; sha256="0hadk3mapkhbh8xjkiz52vxdagmmgvm15xwpzb90ikw4giyipjzl"; depends=[]; }; shapeR = derive2 { name="shapeR"; version="0.1-5"; sha256="17fq4gsdvyniq7n4x1xdvb5kk50184i7why3pdf1djjhknym087j"; depends=[gplots jpeg MASS pixmap vegan wavethresh]; }; shapefiles = derive2 { name="shapefiles"; version="0.7"; sha256="08ghndihs45kylbzd9wnxffn8ixvxjhjnjldjyd526ai2sj8xcgf"; depends=[foreign]; }; shapes = derive2 { name="shapes"; version="1.2.3"; sha256="1fzwpqa0paql4n652diqsqylz5r5crblfip6g6c0vszrvy7avi4q"; depends=[MASS rgl scatterplot3d]; }; @@ -10505,6 +10712,7 @@ in with self; { sharx = derive2 { name="sharx"; version="1.0-5"; sha256="10sfjg6946jfk4051da0w1v89503av40wckqaabr12syf8kn0aw8"; depends=[dclone dcmle Formula]; }; shazam = derive2 { name="shazam"; version="0.1.8"; sha256="0j953zf0wigr645a52088ajrchhr7xlf891hybbx8pvspj240f3y"; depends=[alakazam ape diptest doParallel dplyr foreach ggplot2 igraph iterators kedd KernSmooth lazyeval MASS progress scales SDMTools seqinr stringi tidyr]; }; shelltrace = derive2 { name="shelltrace"; version="3.5.1"; sha256="1xgbavaa26185i6q3907ds3bzq4xrw027x1sw5vsybqrxdz04jiz"; depends=[bmp tiff xlsx]; }; + shiftR = derive2 { name="shiftR"; version="1.2"; sha256="02aa7lpw050rraiajlmyzhmnrz0m3nlc9j5y4rw0k2whglk23j2j"; depends=[]; }; shiny = derive2 { name="shiny"; version="1.0.5"; sha256="0hps6nlyffh685smsm9sd0rdmip0y8v7hgv6a4hqlq7kf8zmzqi0"; depends=[digest htmltools httpuv jsonlite mime R6 sourcetools xtable]; }; shiny_semantic = derive2 { name="shiny.semantic"; version="0.1.1"; sha256="0jd00z817cccz3wfhcmz61wsy5fjw6yyan2ywkf06xqcdpnr8iwh"; depends=[htmltools htmlwidgets purrr shiny]; }; shinyAce = derive2 { name="shinyAce"; version="0.2.1"; sha256="0ycka8rsw0178q9klfid97vdn5cbyx3r778nis5s3dqipdyazdm9"; depends=[shiny]; }; @@ -10513,27 +10721,29 @@ in with self; { shinyFeedback = derive2 { name="shinyFeedback"; version="0.0.3"; sha256="1ikxwa02jpkir1xxx4lvz995ggx8032vl0zknmhccb2mn1k98b4i"; depends=[digest shiny]; }; shinyFiles = derive2 { name="shinyFiles"; version="0.6.2"; sha256="1lphzqbzg482lv0xiamfv28n5nyjppss9zzcpx1cd5fsz0xg1282"; depends=[htmltools RJSONIO shiny]; }; shinyHeatmaply = derive2 { name="shinyHeatmaply"; version="0.1.0"; sha256="1vl80vp7yslnh0dvcrpysfn5rndjavphy31y15546q7ax7d0fn6v"; depends=[dplyr DT heatmaply htmltools htmlwidgets jsonlite plotly RColorBrewer readxl shiny viridis xtable]; }; - shinyKGode = derive2 { name="shinyKGode"; version="1.0.1"; sha256="0454j8dpihnw7hiq9bfss2g6pifa678m7gzgh082b09sjgpfh1mr"; depends=[ggplot2 gridExtra KGode mvtnorm pracma pspline reshape2 shiny shinyjs XML]; }; + shinyKGode = derive2 { name="shinyKGode"; version="1.0.5"; sha256="004zwz4kqfijzvvwkq8v1gi25w1wrdlg8230g93w36gbi6cl2vk1"; depends=[ggplot2 gridExtra KGode mvtnorm pracma pspline reshape2 shiny shinyjs XML]; }; shinyLP = derive2 { name="shinyLP"; version="1.1.0"; sha256="08vc35988pv0kx0kvdl26nkdzcgmi6w4xffmyylan7x59519imkk"; depends=[shiny shinyBS shinythemes]; }; shinyRGL = derive2 { name="shinyRGL"; version="0.1.0"; sha256="07llg1yg5vmsp89jk60ly695zvxky6n06ar77mjxzlyc294akwmy"; depends=[rgl shiny]; }; shinyShortcut = derive2 { name="shinyShortcut"; version="0.1.0"; sha256="101wz9s4rk7fbaqgm0r2v3v8za20vdxwq4vhkz8xr7y5pr65sxiq"; depends=[]; }; shinyTime = derive2 { name="shinyTime"; version="0.2.1"; sha256="0gpa6kypchvvlq71nnlilciclcrhaa488prjz46sddrsxjy09mp7"; depends=[htmltools shiny]; }; shinyTree = derive2 { name="shinyTree"; version="0.2.2"; sha256="08n2s6pppbxn23ijp6vms609p4qwlmfh9g0k5hdfqsqxjrz1nndi"; depends=[shiny]; }; - shinyWidgets = derive2 { name="shinyWidgets"; version="0.4.0"; sha256="0nicn4vjqxfbf8s6kq6xxfjh041n5ssl3cwbllylcvwvy16qxzpw"; depends=[htmltools jsonlite shiny]; }; + shinyWidgets = derive2 { name="shinyWidgets"; version="0.4.1"; sha256="11qwwz4il4n8ha587bc32n1z5pnhw4vv2ffxl9cc1i431k01p7yc"; depends=[htmltools jsonlite shiny]; }; shinyaframe = derive2 { name="shinyaframe"; version="1.0.1"; sha256="1flhgsm4q7p5acb41v73pf8ni92y9dwdppxjb9czlz1sxwf03p1s"; depends=[htmltools htmlwidgets shiny]; }; + shinyalert = derive2 { name="shinyalert"; version="1.0"; sha256="0ngmpbzw6fw1gs6sv9m3xv2c9bmrxg0bs6lnvxn8hm8cwr4440xi"; depends=[digest shiny]; }; shinybootstrap2 = derive2 { name="shinybootstrap2"; version="0.2.1"; sha256="17634l3swlvgj1sv56nvrpgd6rqv7y7qjq0gygljbrgpwmfj198c"; depends=[htmltools jsonlite shiny]; }; shinycssloaders = derive2 { name="shinycssloaders"; version="0.2.0"; sha256="1bpzsm7m7c366sjl1qndp4m5dg2vlm68rjgdy9n1ija9xbp0r2g4"; depends=[digest glue shiny]; }; shinydashboard = derive2 { name="shinydashboard"; version="0.6.1"; sha256="14zi7g5wrngy6lwi9xpvaid7727m6rfdijbb89al9likfhjqzqqy"; depends=[htmltools shiny]; }; shinyjqui = derive2 { name="shinyjqui"; version="0.2.0"; sha256="07ijd5psywlkfrz54d4q68bwij1as4ai0360fya8ikngkwg393mj"; depends=[htmlwidgets jsonlite shiny]; }; - shinyjs = derive2 { name="shinyjs"; version="0.9.1"; sha256="0h90k4f93lbfraldjxlbhjyjr54c3hiv7gyrbqz70j08s0bhyama"; depends=[digest htmltools jsonlite miniUI shiny]; }; - shinymaterial = derive2 { name="shinymaterial"; version="0.4.1"; sha256="1p0493agnhnqgkf7ln4m5d5gqz4aazmcxsbnwarr5nh4si5q5pvl"; depends=[shiny]; }; + shinyjs = derive2 { name="shinyjs"; version="1.0"; sha256="113zpijri0l80rlgrvqn6bxk0sdqgl79h7yhja2p76f9dc9i2sr8"; depends=[digest htmltools jsonlite shiny]; }; + shinymaterial = derive2 { name="shinymaterial"; version="0.5.1"; sha256="1bk4n2zzhiziwfqzpl3b9ybm52mfv1z2f00kyy6d6qvpjwr9qzy2"; depends=[shiny]; }; shinystan = derive2 { name="shinystan"; version="2.4.0"; sha256="18bdh2h6grlwfx6p00214p7cgzg7zfhbvnkd1dmxihp9wf4l80af"; depends=[bayesplot colourpicker DT dygraphs ggplot2 gridExtra gtools markdown reshape2 rsconnect rstan shiny shinyjs shinythemes threejs xtable xts]; }; shinythemes = derive2 { name="shinythemes"; version="1.1.1"; sha256="0i220y051dq763idh1j5zhpb5cpv3jr11jd9akmry9aadyys5pz6"; depends=[shiny]; }; shinytoastr = derive2 { name="shinytoastr"; version="2.1.1"; sha256="01j2z4gf1wxblrjayykwxdr2s8394i7k930x8g4hmrj7c9pv264n"; depends=[shiny]; }; shock = derive2 { name="shock"; version="1.0"; sha256="11m52al591xjznl62q1waxsg5m1a1afmd0yqcc5zsjlrplykg4lp"; depends=[capushe GGMselect glasso igraph mvtnorm]; }; shopifyr = derive2 { name="shopifyr"; version="0.28"; sha256="1ypqgiqimdwj9fjy9ykk42rnkipb4cvdxy5m9z9jklvk5a7cgrml"; depends=[R6 RCurl RJSONIO]; }; shotGroups = derive2 { name="shotGroups"; version="0.7.3"; sha256="0h6c4fz2b4gpbfqykic6apflvp11bcafqm87gzl0zv8b03ydylxk"; depends=[boot coin CompQuadForm KernSmooth robustbase]; }; - showtext = derive2 { name="showtext"; version="0.5"; sha256="1fn3467n3lgl55dh62y7aq5mg3paf6faxp5kp4s04bn33g87zxgx"; depends=[showtextdb sysfonts]; }; + showimage = derive2 { name="showimage"; version="1.0.0"; sha256="1c0x3iqjdjsz3cdhc02b3qm2pwxjr1q2k87jwvxj9lnzzw81f1pl"; depends=[png]; }; + showtext = derive2 { name="showtext"; version="0.5-1"; sha256="0zb9h6frw580cql0nbkvfb0jajq6k4yhqaifvz8cpysd32dk35wm"; depends=[showtextdb sysfonts]; }; showtextdb = derive2 { name="showtextdb"; version="2.0"; sha256="1qwwj9x2jvadvwn60h75k99c9xi7yhqjsgaakahz5paxgj583bsh"; depends=[sysfonts]; }; shp2graph = derive2 { name="shp2graph"; version="0-3"; sha256="0mfb3f64kpd23qa1yb19j7j234snls7yvszp2yxnv9yahk0blifw"; depends=[igraph maptools sp]; }; shrink = derive2 { name="shrink"; version="1.2.1"; sha256="0pd967wsys8fd7gyvr9y08km118yamfk5c1a1i2k8nr2ifpqmy0w"; depends=[MASS mfp rms survival]; }; @@ -10549,14 +10759,15 @@ in with self; { sigQC = derive2 { name="sigQC"; version="0.1.11"; sha256="1mnvpkak37br406ixsn65g0snimf3iiql5yfbwflazw3sz5q11kz"; depends=[biclust class cluster ComplexHeatmap fmsb gplots gridGraphics KernSmooth lattice MASS moments nnet RankProd]; }; sigclust = derive2 { name="sigclust"; version="1.1.0"; sha256="0151v7lr4n4yyn93j0s06gzc9jh9xhdgvfw6kvpfy24jl6wdii7g"; depends=[]; }; sigloc = derive2 { name="sigloc"; version="0.0.4"; sha256="13v2dlgsbcsqqm8yxls62i7r3sk8m3c78jv8f9lgdihq5pjnd9zp"; depends=[ellipse nleqslv]; }; + sigmaNet = derive2 { name="sigmaNet"; version="1.0.3"; sha256="0b9p5kgcbpzb83s0vgmfwmh15lvsfz5q0yk5wl16rxyiqqg2nxag"; depends=[htmlwidgets igraph jsonlite RColorBrewer]; }; sigmoid = derive2 { name="sigmoid"; version="0.2.1"; sha256="1myphx64irwllf3p9aifmg37mg4jg58ik7f42zilg5qsjfhj37zf"; depends=[]; }; signal = derive2 { name="signal"; version="0.7-6"; sha256="1vsxramz5qd9q9s3vlqzmfdpmwl2rhlb2n904zw6f0fg0xxjfq3b"; depends=[MASS]; }; signalHsmm = derive2 { name="signalHsmm"; version="1.4"; sha256="1plyvx0pdid4zydxjwph6v96c8ilzgn55vcdszkslp3a4s2sns65"; depends=[Rcpp seqinr shiny]; }; signmedian_test = derive2 { name="signmedian.test"; version="1.5.1"; sha256="05n7a4h2bibv2r64cqschzhjnm204m2lm1yrwxvx17cwdp847hkm"; depends=[]; }; sigora = derive2 { name="sigora"; version="2.0.1"; sha256="1sgjafr2f7carwnvp0vsvp80jn2bzwlkay38ch63qk9gapsh4imh"; depends=[]; }; - sigr = derive2 { name="sigr"; version="0.2.2"; sha256="1ijj7krszl97x0zk0bi1a77rv1lmzkp70bylgsyqcadqqh8prci3"; depends=[pwr]; }; + sigr = derive2 { name="sigr"; version="0.2.3"; sha256="1kyj8xizswwg5agv4ac296pqvxxq3kla537z10qvg16ilskbqny5"; depends=[pwr]; }; siland = derive2 { name="siland"; version="1.0"; sha256="0zqwslg0vak22q475azwank81wr4kfx33h21w84lsg7iihrb08nv"; depends=[lme4 raster rgdal sp]; }; - sim1000G = derive2 { name="sim1000G"; version="1.32"; sha256="1x0dzg58wb1kzn1j3ad44v3x4lyy7vwsx1hj1klyk7dgnmhlniym"; depends=[hapsim MASS stringr]; }; + sim1000G = derive2 { name="sim1000G"; version="1.38"; sha256="0sc5gsbcvj9vv0sysg9pg0lkh9f8w8mdxpxaf2a1h9x7c9wrx2m7"; depends=[hapsim MASS readr stringr]; }; simEd = derive2 { name="simEd"; version="1.0.3"; sha256="1yq0qblrz0zddx682rzwdaa0k0r223i123la7wbp73spnn38g4br"; depends=[rstream]; }; simFrame = derive2 { name="simFrame"; version="0.5.3"; sha256="154d4k6x074ib813dp42l5l8v81x9bq2c8q0p5mwm63pj0rgf5f3"; depends=[lattice Rcpp]; }; simLife = derive2 { name="simLife"; version="0.3"; sha256="0bqhixr4zg7mwgxdsjk0h5a82dyfkhiv9xafw43w2bpnmyxywdia"; depends=[splancs unfoldr]; }; @@ -10576,10 +10787,10 @@ in with self; { simex = derive2 { name="simex"; version="1.7"; sha256="0dmyxhg3bk23y08xbgwlg791pcl3131im3jkh9x5pjqczfjvim0a"; depends=[]; }; simexaft = derive2 { name="simexaft"; version="1.0.7"; sha256="13w9m35qrrp8kkz4gqp7fg9jv8fs99y19n21bdxsd3f5mlkbvqgl"; depends=[mvtnorm survival]; }; simglm = derive2 { name="simglm"; version="0.6.0"; sha256="1kmi5lpx8m14iz0i9z8811cp6fq2x700qsxn6rxrkxbq88a5mdss"; depends=[dplyr Matrix purrr tibble tidyr]; }; - simmer = derive2 { name="simmer"; version="3.6.4"; sha256="0x5xb1fnkyx1dyvxpwb5i2q7p1xnfcyz6dy1d7c07gvp3444dvbk"; depends=[BH codetools magrittr R6 Rcpp]; }; - simmer_plot = derive2 { name="simmer.plot"; version="0.1.11"; sha256="1vwf9dxyg777ll6h5xcym1c0z75am9gaar1gxvli7d3vxlibpsyc"; depends=[DiagrammeR dplyr ggplot2 scales simmer tidyr]; }; + simmer = derive2 { name="simmer"; version="3.6.5"; sha256="1vkicav2642il5php26qdji8kji0jrg42x9p5gyzy6fnih6jimnz"; depends=[BH codetools magrittr R6 Rcpp]; }; + simmer_bricks = derive2 { name="simmer.bricks"; version="0.1.0"; sha256="1sb1ayh56sbgs4p0r3frjjfn4vcdr43xm85lvb9aqk3wmj2lddqy"; depends=[simmer]; }; + simmer_plot = derive2 { name="simmer.plot"; version="0.1.12"; sha256="1519l3zj7jmjr8yv12ah61r6m7vyjxbnyajqdhvl388bix30dn6w"; depends=[DiagrammeR dplyr ggplot2 scales simmer tidyr]; }; simmr = derive2 { name="simmr"; version="0.3"; sha256="18ycrd7qbz7frvd3bgbqaaapslw1jw89fy3np5qyb9sswyk08w9m"; depends=[boot coda compositions ggplot2 MASS reshape2 rjags viridis]; }; - simone = derive2 { name="simone"; version="1.0-3"; sha256="1l38xbcf50kjh0k4dc4xsxkjr54jz4s98az99mzcsdarqd6kz9kg"; depends=[mixer]; }; simpleCache = derive2 { name="simpleCache"; version="0.3.1"; sha256="14jrsfxcrndfgi7yl5frfsyixxkhagc7cfav8h6mf6apfxx0v1ls"; depends=[]; }; simpleNeural = derive2 { name="simpleNeural"; version="0.1.1"; sha256="0rm6kvz1mppvgcvwsgg3nz6ci37l95ins64g0jh4rw6lfmy0grjc"; depends=[]; }; simpleRCache = derive2 { name="simpleRCache"; version="0.3.2"; sha256="0ldmxa5rw1kcb24swnk8s471ww11jfbscynaahnnsi0zzqmhwirk"; depends=[digest]; }; @@ -10587,14 +10798,14 @@ in with self; { simpleboot = derive2 { name="simpleboot"; version="1.1-3"; sha256="1qprjisfflhzg8ll12p3q1zcfdiyc45glic2j9cw9nhx5rb065fk"; depends=[boot]; }; simplegraph = derive2 { name="simplegraph"; version="1.0.0"; sha256="1gcpbljp1fgaprxnmq23izf1h2x3p5dnxlylwqsnlcj50bvm46gq"; depends=[]; }; simplexreg = derive2 { name="simplexreg"; version="1.3"; sha256="1zkh00xbddhgz0qn0a5pj12n0hpx4f5kihpfj71x92pmxpzglcxh"; depends=[Formula plotrix]; }; - simplr = derive2 { name="simplr"; version="0.1-1"; sha256="14gv2cwygjjfc9yjdrcn68scgyh469kypmf4mqy5p18gsxfj3h1c"; depends=[]; }; simputation = derive2 { name="simputation"; version="0.2.2"; sha256="0bn5pq3gbsjc7sdivki98k9cb0sp5wkpm0bwi4mdnvpd7r2psb1n"; depends=[gower MASS rpart]; }; simr = derive2 { name="simr"; version="1.0.3"; sha256="0kp1x2bxr0ck49y9pn44jr7pp3ji1cqi48dr5z600mzacx6l95xp"; depends=[binom car iterators lme4 pbkrtest plotrix plyr RLRsim stringr]; }; simrel = derive2 { name="simrel"; version="1.0-1"; sha256="0905rjqh8c08vyg090h0i7sx89vdryignslldzfz2r5yrszl4ga8"; depends=[FrF2 sfsmisc]; }; simsalapar = derive2 { name="simsalapar"; version="1.0-9"; sha256="0h46acf797lp1hvs8x91nzll3zxiiczfl6vdxxrwizr109jzggcj"; depends=[colorspace gridBase sfsmisc]; }; simsem = derive2 { name="simsem"; version="0.5-13"; sha256="0v6gbfp4659gbpzc1vffg687c8bcd45ddb7jhd0bgx66m28853kk"; depends=[lavaan]; }; - simstudy = derive2 { name="simstudy"; version="0.1.7"; sha256="17bs1j6admf897rvxx3bcrg50nfwv5fwj4y72wkczy21d856s1x4"; depends=[data_table mvnfast Rcpp]; }; + simstudy = derive2 { name="simstudy"; version="0.1.8"; sha256="0n8wq8xw4vlpcz6qlqkza9zwd3nkbmhs8nw2gzz64q9blzcp69mw"; depends=[data_table mvnfast Rcpp]; }; simsurv = derive2 { name="simsurv"; version="0.1.0"; sha256="08w5kbzx3wlksl17kjg9j4dj1f40ddm32mafi75y5c8bwgcfzqzy"; depends=[]; }; + simtimer = derive2 { name="simtimer"; version="3.0.0"; sha256="0hfp652s97dz07fs92gfsaiwd6pwg95qsvr6qjwj1k5d3h6hzf8y"; depends=[]; }; simulator = derive2 { name="simulator"; version="0.2.0"; sha256="18x0c9bf9anbykq9f46fxnnx7g36bh01s4cdmrn7mdygs6ac9c8z"; depends=[magrittr]; }; simule = derive2 { name="simule"; version="1.2.0"; sha256="09lhd0q0xn15v0j172749rih3p2qgn3sbprhj2az9s4fm9752az3"; depends=[igraph lpSolve pcaPP]; }; sinaplot = derive2 { name="sinaplot"; version="1.1.0"; sha256="0zfq6l8wjvdj7rndsfyh0a2xjlxmn2ij1q50hg3xjfpwrjxcsck8"; depends=[plyr]; }; @@ -10602,7 +10813,7 @@ in with self; { sinib = derive2 { name="sinib"; version="1.0.0"; sha256="08x2a5hn41vcsai3r36w1kgzka4ks53pkp6dxn90bsqh40ydb0db"; depends=[]; }; siplab = derive2 { name="siplab"; version="1.2"; sha256="0r7gk9qsmbc3ln67cb8p87bq3s2rx6fbavlly1fpzqqv2isf5pq9"; depends=[spatstat]; }; sirad = derive2 { name="sirad"; version="2.3-3"; sha256="0vhmk2fmq4797gj6c8803zw1ipmdxfvdfgi2bygzxbn5bqd4da2n"; depends=[raster zoo]; }; - sirt = derive2 { name="sirt"; version="2.3-57"; sha256="1ciyr75hgs3ag14gsmcilr8gpnyaa1drsxiqmjfaj5gr2sgm2107"; depends=[CDM coda lavaan lavaan_survey mirt mvtnorm Rcpp RcppArmadillo sfsmisc survey TAM]; }; + sirt = derive2 { name="sirt"; version="2.4-20"; sha256="0kgy5jv6yz6hlx4c8mbb4fgqfb8ihslmaxqxlr8qpqh79fvgv2q6"; depends=[CDM coda lavaan lavaan_survey mirt mvtnorm Rcpp RcppArmadillo sfsmisc survey TAM]; }; sisVIVE = derive2 { name="sisVIVE"; version="1.4"; sha256="1vh53irxgk8ahw52cdqbbm89dvmzyf54izg4lm8a3v92k5p6nzwz"; depends=[lars]; }; sisal = derive2 { name="sisal"; version="0.46"; sha256="00szc3l69i0cksxmd0lyrs4p6plf05sl4vxs3nl4gkbja5y4lvpc"; depends=[boot digest lattice mgcv R_matlab R_methodsS3]; }; sisus = derive2 { name="sisus"; version="3.9-13"; sha256="0lz9ww07dvdx6l3k5san8gwq09hycc3mqwpgzmr2ya9z8y27zadr"; depends=[coda gdata gtools MASS moments polyapost rcdd RColorBrewer]; }; @@ -10613,23 +10824,25 @@ in with self; { sitreeE = derive2 { name="sitreeE"; version="0.0-1"; sha256="1gb0n5gis4ac0fdjcc496fwpvwmw5iwafpsjy3i1mpkjkxpn7za9"; depends=[sitree]; }; sivipm = derive2 { name="sivipm"; version="1.1-3"; sha256="1l0j1bi38s09ax4kwikk615lyd074gzg1aa1j2jfmhr3igannm3z"; depends=[seqinr]; }; sizeMat = derive2 { name="sizeMat"; version="0.3.0"; sha256="0766wxcc1980ivlib2saagl20y9dm0ar7i43qcqk2jpdbbaky33z"; depends=[MASS matrixStats mcmc MCMCpack]; }; - sjPlot = derive2 { name="sjPlot"; version="2.4.0"; sha256="0ikp9s5fyxjfyblyy8szzcgw10xjxzbcjh618xazv6kb1vs58mfl"; depends=[arm broom dplyr effects forcats ggeffects ggplot2 glmmTMB knitr lme4 magrittr MASS merTools modelr nlme prediction psych purrr rlang scales sjlabelled sjmisc sjstats tibble tidyr tidyselect]; }; + sjPlot = derive2 { name="sjPlot"; version="2.4.1"; sha256="0aazxrqsbp5jsd5yfm6hrx17rmlqbh5vs314xms7g620aj383zrh"; depends=[arm broom dplyr effects forcats ggeffects ggplot2 glmmTMB knitr lme4 magrittr MASS merTools modelr nlme psych purrr rlang scales sjlabelled sjmisc sjstats tibble tidyr tidyselect]; }; sjdbc = derive2 { name="sjdbc"; version="1.6.0"; sha256="17ncgj2s2pjn3w3c1dgxv8g7y17h4p78iic86gsj2ahn0xpsmkcc"; depends=[rJava]; }; - sjlabelled = derive2 { name="sjlabelled"; version="1.0.5"; sha256="1v7pgba03ip9qib0mgja73nfbbk8x109vmpig1rz3zpbnfnkipcn"; depends=[broom dplyr haven magrittr prediction purrr snakecase tibble]; }; - sjmisc = derive2 { name="sjmisc"; version="2.6.3"; sha256="0x1ij1ff3475s04y0wk9bnqfvclpnz084sk6wh06hndi7vvm0n2f"; depends=[broom cli crayon dplyr haven magrittr psych purrr rlang sjlabelled stringdist stringr tibble tidyr tidyselect]; }; - sjstats = derive2 { name="sjstats"; version="0.13.0"; sha256="0z4623q1n3ymc98q8klljqh8b45c8gnl7ibh0lz8wla6w1lrykcx"; depends=[bayesplot broom coin dplyr glmmTMB lme4 lmtest magrittr MASS Matrix modelr nlme prediction purrr pwr rlang sandwich sjlabelled sjmisc tibble tidyr tidyselect]; }; + sjlabelled = derive2 { name="sjlabelled"; version="1.0.7"; sha256="1c2xk4ykf88h601c9ka8mjmk5fn91z2gcl2wx78492npipdxifmw"; depends=[broom dplyr haven magrittr prediction purrr rlang snakecase tibble]; }; + sjmisc = derive2 { name="sjmisc"; version="2.7.0"; sha256="1bni8ppvabzjx94hd8ygp14n2g6a8qhjvnimm0v7pqbf7czmpapy"; depends=[broom cli crayon dplyr haven magrittr pillar psych purrr rlang sjlabelled stringdist stringr tibble tidyr tidyselect]; }; + sjstats = derive2 { name="sjstats"; version="0.14.1"; sha256="10siniyy1nqsacayyl7p35yc9gmdh5rjlwzv8aywid2a1ld13lfs"; depends=[bayesplot broom cli coin crayon dplyr emmeans glmmTMB lme4 lmtest magrittr MASS Matrix modelr nlme prediction purrr pwr rlang sandwich sjlabelled sjmisc tibble tidyr tidyselect]; }; skda = derive2 { name="skda"; version="0.1"; sha256="0a6mksr1d0j3pd0kz4jb6yh466gvl4fkrvgvnlmvivpv6b2gqs3q"; depends=[]; }; skeleSim = derive2 { name="skeleSim"; version="0.9.8"; sha256="1wxdl30cy8vr1cd0wcjxyklp6crw4bv8r77ma2dkzmxm2ma5jw92"; depends=[adegenet ape hierfstat igraph markdown pegas reshape2 rmetasim shiny shinyFiles strataG swfscMisc]; }; skeletor = derive2 { name="skeletor"; version="1.0.4"; sha256="1jfbfbkjx8mdwamsrkhvcnyn470in702vgcyw3g2dbgs84gl29q8"; depends=[]; }; skellam = derive2 { name="skellam"; version="0.2.0"; sha256="0r5wbs5h7xc3k2vjxd4axwnxr9cmwm008fcyj1vyixkg8fa680gx"; depends=[]; }; skewt = derive2 { name="skewt"; version="0.1"; sha256="1xm00zfzjv53cq9drfcx7w2ri5dwsq7kajrk2hc1mvw0b6s4x2ix"; depends=[]; }; + skimr = derive2 { name="skimr"; version="1.0.1"; sha256="173ymwkx7n24xj70azdwlpiyswdfy17mw2dhpqcm6ssv0crnjjcc"; depends=[dplyr knitr magrittr pander purrr rlang stringr tibble tidyr tidyselect]; }; skm = derive2 { name="skm"; version="0.1.5.4"; sha256="06g3bdncq2r56d8k3dr87gqnibypbsps0gj4jxkw9q1sq1yaff3v"; depends=[data_table magrittr plyr Rcpp RcppArmadillo RcppParallel]; }; skmeans = derive2 { name="skmeans"; version="0.2-11"; sha256="1a8nwlym6pf0z13nnw1id2wls9lq788860yhjaqd56c3slzfsymn"; depends=[clue cluster slam]; }; - skpr = derive2 { name="skpr"; version="0.40.1"; sha256="1sg2qw9k0sndsnva9kbz6iasjnjcc6g91kglic64rdanrvh0xvaw"; depends=[doParallel foreach iterators lme4 nlme Rcpp RcppArmadillo rintrojs shiny shinythemes survival]; }; + skpr = derive2 { name="skpr"; version="0.45.2"; sha256="1wi19rz9mhim91pqdzljjscpsv2dbm838jjbv9ynmscjnfcbbfl6"; depends=[doParallel foreach iterators kableExtra knitr lme4 nlme Rcpp RcppArmadillo rintrojs shiny shinythemes survival]; }; + skynet = derive2 { name="skynet"; version="1.0"; sha256="00i3gvl9hz72id449wph8f0gncps6gzj0yz4n34ys8ih0j8n8b81"; depends=[data_table dplyr ggplot2 ggrepel igraph maps stringr]; }; skyscapeR = derive2 { name="skyscapeR"; version="0.2.2"; sha256="08h3vvn9zglw3xrl0xpyj95r1n3v6lk835a4nbanxdvi21mgpi77"; depends=[astrolibR doParallel foreach MESS numDeriv oce plotrix png pracma RColorBrewer rootSolve]; }; sla = derive2 { name="sla"; version="0.1"; sha256="0fr5n65ppwsh9z7a6rma9ak0bl8x3nz7v25lij7wb5nrf3sl74yb"; depends=[]; }; slackr = derive2 { name="slackr"; version="1.4.2"; sha256="1vm2h5fzcss3xx1annx68wrvv6c0s6h2ci0bipxmdl9amdaqw85w"; depends=[dplyr ggplot2 httr jsonlite]; }; - slam = derive2 { name="slam"; version="0.1-40"; sha256="1di5qs8sz4bh47653kmjcdbdxir03k3nin8mh817ga9af7aa3b5g"; depends=[]; }; + slam = derive2 { name="slam"; version="0.1-42"; sha256="1pvmfvqa2gcwmap41rp3rx9jrk16jvw80pq0hf5qgja4jlcb01kj"; depends=[]; }; sld = derive2 { name="sld"; version="0.3.2"; sha256="0za5pw7ki419ni9pqqzddb10d16nvv5rh5jrkl4f77j0ps2ajylp"; depends=[lmom]; }; sleekts = derive2 { name="sleekts"; version="1.0.2"; sha256="0syk244xrsv8hz5sxm7wizk0kyn1nc6z4c63c8xn57fz130zj75k"; depends=[]; }; slfm = derive2 { name="slfm"; version="0.2.2"; sha256="01n9y6kyl7z1ynckp2hkrv2yl9jf30zcbbi3sx9jrcha557fg1cf"; depends=[coda lattice Rcpp RcppArmadillo]; }; @@ -10642,13 +10855,13 @@ in with self; { smaa = derive2 { name="smaa"; version="0.2-5"; sha256="1mwahjgslk82f8bl6qcjs1yadhbnqrxxhvkffkgc2fv3s6lh5d9m"; depends=[]; }; smac = derive2 { name="smac"; version="1.0"; sha256="1inn7i5k0q5vln24kazh3gl3szf6lxwnjr2rw70jcyn9dr9iy952"; depends=[]; }; smacof = derive2 { name="smacof"; version="1.9-6"; sha256="19x11011w8kwdbd0jp7y7zqhmn0a5bhc9gh7jkcpxij8ppiigh8y"; depends=[candisc colorspace ellipse Hmisc MASS nnls plotrix polynom weights wordcloud]; }; - smacpod = derive2 { name="smacpod"; version="1.4.1"; sha256="17f28nax92nkfgs972gqcjnnz6sw4p8n36rrhx00dy19vr569kp5"; depends=[plotrix SpatialTools spatstat]; }; + smacpod = derive2 { name="smacpod"; version="2.0"; sha256="05bylhh98qlnq4gn0wwg3wb3pwa1q2kh06v2skj2fgbjgr03fhkn"; depends=[abind pbapply plotrix sp SpatialTools spatstat]; }; smallarea = derive2 { name="smallarea"; version="0.1"; sha256="0jcv0xbh8v4g6zxxs4yyd0divwzk9d2w7g01r4s65khxvy3av7yx"; depends=[MASS]; }; smam = derive2 { name="smam"; version="0.3-0"; sha256="1sdr0ki2y9smiwfglgh97kj6y0n1z3blyyxk823xp3467byk1rnb"; depends=[Matrix numDeriv Rcpp]; }; smapr = derive2 { name="smapr"; version="0.1.1"; sha256="0ci0j26nsgl4yi0b0bhxqgpn281ml5clhih2nl7hm5l8nybdyp3q"; depends=[httr rappdirs raster rhdf5 rvest xml2]; }; smart = derive2 { name="smart"; version="1.0.1"; sha256="0ki3qn71zrw0nyv395qijcwahnxyv1p21j8x6cxr9spah2wzz8lb"; depends=[elasticnet gplots gtools igraph Matrix pcaPP PMA]; }; smatr = derive2 { name="smatr"; version="3.4-3"; sha256="0iiazln4albj7k5w67slvyn98cqg4f6k409mml0n1pvlkki0h7gy"; depends=[plyr]; }; - smbinning = derive2 { name="smbinning"; version="0.4"; sha256="13n3vc83rk6nicid41z47srwy5lfaa7kral2iphpb5ngji00gq1i"; depends=[Formula gsubfn partykit sqldf]; }; + smbinning = derive2 { name="smbinning"; version="0.5"; sha256="1ac3apbkmhwvm0fds92j82r63krj94m69g0sid2v9mimdq30k25i"; depends=[Formula gsubfn partykit sqldf]; }; smcUtils = derive2 { name="smcUtils"; version="0.2.2"; sha256="0d1kmg386j0zrpp8vgxjwvpf1i25l86xrh82767xkp0n9qj8srwq"; depends=[]; }; smcfcs = derive2 { name="smcfcs"; version="1.3.0"; sha256="1860qzhfpdr78a8ha8537izbkm0dx9j63l9fv6mswcs5sjl25i09"; depends=[MASS survival VGAM]; }; smco = derive2 { name="smco"; version="0.1"; sha256="1sj3y1x6pc32cwzyhn9gaxs964xh5xl4vw08hsa8kfcxhh2r0s99"; depends=[]; }; @@ -10656,13 +10869,13 @@ in with self; { smdata = derive2 { name="smdata"; version="1.1"; sha256="1hcr093xfkp88fn75imjkmfnp9cfsng5ndxpa8m2g0l29qhpxfvk"; depends=[]; }; smdc = derive2 { name="smdc"; version="0.0.2"; sha256="1j6xnzjbmmakbmk3lyjck3bsy8w8hyd9d8h04s4gbddhci283mqm"; depends=[proxy tm]; }; smds = derive2 { name="smds"; version="1.0"; sha256="0aqf3wfn6mlsl8a32gaf9qdpyxwsx19g6mma8qzgaysdmk6vhbpd"; depends=[MASS]; }; - sme = derive2 { name="sme"; version="0.8"; sha256="1djrs3z699p6q2y1hfywh27csqc9cp1cfm3lxkigmmvxqjhyshz6"; depends=[lattice]; }; + sme = derive2 { name="sme"; version="1.0.2"; sha256="0gszpy1sx2qsypps3iza79sab475wcrscl7wnbbrv97a3ry0ybp6"; depends=[lattice]; }; smerc = derive2 { name="smerc"; version="0.2.2"; sha256="0x1n1plnq63grs09cijhy265xqrfg9az1pp9n5dg5wqlj6gf9rzi"; depends=[fields igraph maps smacpod SpatialTools spdep]; }; smfsb = derive2 { name="smfsb"; version="1.1"; sha256="0khd23b6k9zgxz2x6g6c6k2g32mbpli32izdq6fgk1a990kdsp6j"; depends=[]; }; smirnov = derive2 { name="smirnov"; version="1.0-1"; sha256="09mpb45wj8rfi6n6822h4c335xp2pl0xsyxgin1bkfw97yjcvrgk"; depends=[]; }; smnet = derive2 { name="smnet"; version="2.1.1"; sha256="0fa47zgm7jxvs3jfai54wsc6qa9ycqw4f3yr941fvkczwzh4ch02"; depends=[DBI RSQLite spam SSN]; }; smoof = derive2 { name="smoof"; version="1.5.1"; sha256="01jkldmxn86vmcmmz81mdlhpm1m3bddj4sv550a3b4wm1r3gddng"; depends=[BBmisc checkmate ggplot2 mco ParamHelpers plot3D plotly RColorBrewer Rcpp RcppArmadillo RJSONIO]; }; - smooth = derive2 { name="smooth"; version="2.2.1"; sha256="1616rxpmzmjy44a2i463zlv6ldwda7f4ly7dffj5dk7rrsh46k0w"; depends=[forecast nloptr Rcpp RcppArmadillo zoo]; }; + smooth = derive2 { name="smooth"; version="2.4.0"; sha256="1492zbfhpijpdikb260m02rv876gc4xr3py645x760icyz7h9fpx"; depends=[forecast nloptr Rcpp RcppArmadillo zoo]; }; smoothAPC = derive2 { name="smoothAPC"; version="0.2"; sha256="06f0d4bjygpgcayzg9cxcb5plhsls0ljla2mrmjnjxpq8g3c3cl8"; depends=[colorspace lmtest quantreg rgl SparseM]; }; smoothHR = derive2 { name="smoothHR"; version="1.0.2"; sha256="0l33xg3p9pyfrp4rhavz8m1jakk4wr8i14g6jjiizb03rpxdpzqy"; depends=[survival]; }; smoothSurv = derive2 { name="smoothSurv"; version="2.0"; sha256="0ypgmqf7mj0x0ibid9qx6cbqn4cpig8333g095b64297bf0syvjc"; depends=[survival]; }; @@ -10670,13 +10883,14 @@ in with self; { smoothie = derive2 { name="smoothie"; version="1.0-1"; sha256="12p4ig8fbmlsby5jjd3d27njv8j7aiwx0m2n1nmgvjj0n330s1kj"; depends=[]; }; smoothmest = derive2 { name="smoothmest"; version="0.1-2"; sha256="14cri1b6ha8w4h8m26b3d7qip211wfv1sywgdxw3a6vqgc65hmk5"; depends=[MASS]; }; smoothtail = derive2 { name="smoothtail"; version="2.0.5"; sha256="1sqkwniz9m03k23nba9ndmdm0g03mdshzm8risr6wz98jcqjilrk"; depends=[logcondens]; }; - smotefamily = derive2 { name="smotefamily"; version="1.1"; sha256="1qriyvfa6vgs7i8al7sipz0a887jzbw725kxsfa9mw22h6wm1ld8"; depends=[]; }; + smotefamily = derive2 { name="smotefamily"; version="1.2"; sha256="166gqwqljips2r0030m3q44zmxlnxcpb9hmwbg1bk3dqk9gfl8ra"; depends=[]; }; smpic = derive2 { name="smpic"; version="0.1.0"; sha256="0ff2146gjcrc6nvrbf4779jh076abhb843zzlk2zvqir13qfap61"; depends=[ggplot2 imager stringr]; }; sms = derive2 { name="sms"; version="2.3.1"; sha256="0vr5jy8bxbczaqr9kg0fnanxhv9nj51yzgacrb63k33cs85p981m"; depends=[doParallel foreach iterators]; }; smss = derive2 { name="smss"; version="1.0-2"; sha256="04lgfdcvnzpnpplyl62fy7slyiy8wkqpjjrzmclgqis3c9zkkncp"; depends=[]; }; sn = derive2 { name="sn"; version="1.5-1"; sha256="0l7qlah6dwkp8jswnr2mn3phlm15naba5zkmv0g5pcqy5ix0gz7w"; depends=[mnormt numDeriv]; }; sna = derive2 { name="sna"; version="2.4"; sha256="1ks8819qvpdfansfqj9p32s1rhvl26frvbi78m4rx1wd1qcv74i2"; depends=[network statnet_common]; }; - snakecase = derive2 { name="snakecase"; version="0.5.1"; sha256="0mgnmdjrg3xkhfq5mc29ixpaw12fm4052i5733xc2ch6793ikmpm"; depends=[magrittr purrr stringi stringr]; }; + snakecase = derive2 { name="snakecase"; version="0.8.1"; sha256="0vpzvdb1acph9xs52lw7hhd3a58lm5k9fmgkw70fijsrciihz6ns"; depends=[magrittr purrr stringi stringr]; }; + snappier = derive2 { name="snappier"; version="0.1.0"; sha256="0334zwhqdl3lfw7rg8ql7z10qj8jjrm17yi9mgdcxnzaf3f1p859"; depends=[]; }; snapshot = derive2 { name="snapshot"; version="0.1.2"; sha256="0cif1ybxxjpyp3spnh98qpyw1i5sgi1jlafcbcldbqhsdzfz4q10"; depends=[]; }; snht = derive2 { name="snht"; version="1.0.5"; sha256="0k8w1118b2qrf5zfi902gm6zf7b1mwv7py7wg57vsibh2r2ra8ah"; depends=[ggplot2 gridExtra mgcv plyr reshape2 zoo]; }; snipEM = derive2 { name="snipEM"; version="1.0"; sha256="0f98c3ycl0g0l3sgjgk7xrjp6ss7n8zzlyzvpcb6agc60cnw3w03"; depends=[GSE MASS mvtnorm Rcpp RcppArmadillo]; }; @@ -10686,44 +10900,45 @@ in with self; { snowFT = derive2 { name="snowFT"; version="1.6-0"; sha256="00rq2xibzhx7441v9jg138a4fkmx28hifs4yyj3pwi8najf0df4n"; depends=[rlecuyer snow]; }; snowboot = derive2 { name="snowboot"; version="0.5.2"; sha256="07mly89x9mj5cvpmi45xmlr4d1l1d2fdcagmniviqqqhmllc50pi"; depends=[igraph Rcpp VGAM]; }; snowfall = derive2 { name="snowfall"; version="1.84-6.1"; sha256="13941rlw1jsdjsndp1plzj1cq5aqravizkrqn6l25r9im7rnsi2w"; depends=[snow]; }; + snowflakes = derive2 { name="snowflakes"; version="1.0.0"; sha256="0adna9jfs0wv4dhyjczxhq7c0ldjfai07p1q9119avxyilv9x0vi"; depends=[]; }; snp_plotter = derive2 { name="snp.plotter"; version="0.5.1"; sha256="16apsqvkah5l0d5qcwp3lq2jspkb6n62wzr0wskmj84jblx483vv"; depends=[genetics]; }; snpEnrichment = derive2 { name="snpEnrichment"; version="1.7.0"; sha256="1lja1n26nr8lgbca2kraryv933jwa2w3h41appzylflf0w3liz9y"; depends=[ggplot2 snpStats]; }; snpRF = derive2 { name="snpRF"; version="0.4"; sha256="1amxc4jprrc6n5w5h9jm2as025gqdqkla2asz7x97sjdnnj9kzzn"; depends=[]; }; snpReady = derive2 { name="snpReady"; version="0.9.4"; sha256="16nfwjda15gjk0y1rvvnlbx350rgdvpk397glp7yl2ji0amwv20r"; depends=[Matrix matrixcalc stringr]; }; snpStatsWriter = derive2 { name="snpStatsWriter"; version="1.5-6"; sha256="04qhng888yih8gc7yd6rrxvvqf98x3c2xxz22gkwqx59waqd4jlq"; depends=[colorspace snpStats]; }; snpar = derive2 { name="snpar"; version="1.0"; sha256="0c9myg748jm7khqs8yhg2glxgar1wcf6gyg0xwbmw0qc41myzfnq"; depends=[]; }; - snplist = derive2 { name="snplist"; version="0.18"; sha256="1x1l6z34b6k6325rjjmfa5nkbf5j472hrn9lyiw8s7h1wvf4gc1v"; depends=[biomaRt DBI R_utils Rcpp RSQLite]; }; + snplist = derive2 { name="snplist"; version="0.18.1"; sha256="14x31h8h3lx25rm30vhp89byrzy3qrmawi07pmzy4xpxdf0rxm4s"; depends=[biomaRt DBI R_utils Rcpp RSQLite]; }; sns = derive2 { name="sns"; version="1.1.2"; sha256="132zd57xb2y0nshw4lakf49r2mvvkv7j32f7l7hqrh91mw7wyqpr"; depends=[coda mvtnorm numDeriv]; }; soc_ca = derive2 { name="soc.ca"; version="0.7.3"; sha256="0z3phmvgwd3s6swfaywq851my12a2n48i6k26vhggc6pf9d28phl"; depends=[ellipse ggplot2 ggrepel gridExtra reshape2 shiny]; }; social = derive2 { name="social"; version="1.0"; sha256="0ny81bhj80rlwwa6cgbkdz2rxz6bp0f3nvjr1sqxr4s8l8rnf4ic"; depends=[Rcpp]; }; + socialmixr = derive2 { name="socialmixr"; version="0.1.1"; sha256="1immpjc4p7xjc4ghhb3l4wilacg6h0gpihmhx60309gi1snz23ai"; depends=[countrycode curl data_table httr jsonlite oai stringr wpp2015]; }; sodavis = derive2 { name="sodavis"; version="1.0"; sha256="1mhmrg7c0chwjw117pzjya5y0ml8mm9ps5b64q5cjchlxr8900nx"; depends=[MASS mvtnorm nnet]; }; sodium = derive2 { name="sodium"; version="1.1"; sha256="1zxzi8xvxnhgcd5qrylf08nz1cdq3aslrswjas440qg63ypmbf6w"; depends=[]; }; - sofa = derive2 { name="sofa"; version="0.2.0"; sha256="0jjc3r25qprxrhwwzx4b70i51v8gygxwx3x9d1zydx9hw1plk0mb"; depends=[httr jsonlite mime R6]; }; + sofa = derive2 { name="sofa"; version="0.3.0"; sha256="10f01a23bq6a30f95cilfan588dg0bg36y7g14q46rmcz15cqbrx"; depends=[crul jsonlite mime R6]; }; softImpute = derive2 { name="softImpute"; version="1.4"; sha256="07cxbzkl08q58m1455i139952rmryjlic4s2f2hscl5zxxmfdxcq"; depends=[Matrix]; }; softclassval = derive2 { name="softclassval"; version="1.0-20160527"; sha256="1f5qj5sajy3dg0mgss6f9w6v5a2prcypld9jcv457bd4n4a409kr"; depends=[arrayhelpers svUnit]; }; softermax = derive2 { name="softermax"; version="0.3.0"; sha256="0shsd7cbj8j8z65flyddkjdpigyyqpw4j6ljl9pl9hwasksi05gk"; depends=[readr xml2]; }; softmaxreg = derive2 { name="softmaxreg"; version="1.2"; sha256="0y1r4n83sv2744lpli65aip0c0cq823asb8gw9yy9yjjc9sbyr9s"; depends=[]; }; soil_spec = derive2 { name="soil.spec"; version="2.1.4"; sha256="129iqr6fdvlchq56jmy34s6qc2j5fcfir6pa5as5prw0djyvbdv0"; depends=[GSIF hexView KernSmooth pls sp wavelets]; }; - soilDB = derive2 { name="soilDB"; version="1.8.14"; sha256="1q7sfn9dbiq5as3ls4n35s9c6cabsg7dz30rl63w5mqxp0m5k3c3"; depends=[aqp curl Hmisc plyr raster reshape2 sp xml2]; }; + soilDB = derive2 { name="soilDB"; version="2.0-1"; sha256="0nzi0fss77x0bjdzslhy0flwvhap0i0cq3xw82x7sggnbmc3ya72"; depends=[aqp curl Hmisc plyr raster reshape2 sp xml2]; }; soilcarbon = derive2 { name="soilcarbon"; version="1.2.0"; sha256="1gxq7np5xh3jcqbsf8xva4b82rv6rab2j23mbkc4pjs6nbnzvzba"; depends=[devtools ggplot2 openxlsx shiny]; }; soilphysics = derive2 { name="soilphysics"; version="3.1"; sha256="11c094bqbwhggh0n3hdva1321gqzz2k1b7v3767wyyk1xpgzg98r"; depends=[boot MASS rpanel tkrplot]; }; soilprofile = derive2 { name="soilprofile"; version="1.0"; sha256="0sdfg6m2m6rb11hj017jx2lzcgk6llb01994x749s0qhzxmvx9mb"; depends=[aqp lattice munsell splancs]; }; - soiltexture = derive2 { name="soiltexture"; version="1.4.1"; sha256="1rvrji3xrs6smxcgggl6phnbx595wl1s2d8djnvzfca20k9q6a1q"; depends=[MASS sp]; }; + soiltexture = derive2 { name="soiltexture"; version="1.4.5"; sha256="0a9n89ygfqpm6sir76ginri1l6gmw3gfd58szl4ikzaz8fk5hxqh"; depends=[MASS sp]; }; soilwater = derive2 { name="soilwater"; version="1.0.5"; sha256="11gal7hj73j82qx65krmzpmf0gpm41ph8hw70df46dbf4w23vvjn"; depends=[]; }; solaR = derive2 { name="solaR"; version="0.44"; sha256="1waxi2zfns4dh1vpsl3khbgaw07icp4f1ax9l0pry9qipmk0nk3k"; depends=[lattice latticeExtra RColorBrewer zoo]; }; solarPos = derive2 { name="solarPos"; version="1.0"; sha256="0004da7vqpq14q5lhs8vyvjl99j8gzxd5wrlw5d1vwfns3ica0q5"; depends=[]; }; solarius = derive2 { name="solarius"; version="0.3.0.2"; sha256="17c765nxq81xshyyl4lfhqjmgvmhn9xyzc6x4qd33wvhh4148f38"; depends=[data_table ggplot2 plyr]; }; - solidearthtide = derive2 { name="solidearthtide"; version="1.0.2"; sha256="0274f7vyjymx6hd7ik68hznip57ni4cxp1bw7z91v1jzp3ch17rv"; depends=[]; }; solr = derive2 { name="solr"; version="0.1.6"; sha256="0hlysi1yw4l98dcb1shznzrgia9pqzfj0p1hmnfz5gz2j64lf4h4"; depends=[assertthat httr plyr rjson XML]; }; solrium = derive2 { name="solrium"; version="1.0.0"; sha256="1rlf60kynqb8pvzllfdkiabxgnqx60hwm8vy86y9f2bh7d7jsdhf"; depends=[crul dplyr jsonlite plyr R6 tibble xml2]; }; - solvebio = derive2 { name="solvebio"; version="2.2.0"; sha256="0va59rfjpa6x5v3xzrhmrb882gf04sd9nilnlpvjhnfjj3xaavcq"; depends=[dplyr httr jsonlite mime]; }; + solvebio = derive2 { name="solvebio"; version="2.3.1"; sha256="0mbb7ri8shknlw1m7985as84i0m837awpsd89yxc5gr1hvzgdvlh"; depends=[dplyr httr jsonlite mime]; }; som = derive2 { name="som"; version="0.3-5.1"; sha256="1fbza1jxvwrkf5x3inkj36vshhkn7mz0ajqlxalbfmk6ngjw1x56"; depends=[]; }; som_nn = derive2 { name="som.nn"; version="1.1.0"; sha256="0mw2c2lqvdq9bhndpjyawjy43l4x7clcsx2350j45g7fnchhy602"; depends=[class hexbin kohonen som]; }; soma = derive2 { name="soma"; version="1.1.1"; sha256="1mc1yr9sq9h2z60v40aqmil0xswj5hgxfdh4racq297qw3a97my4"; depends=[reportr]; }; someKfwer = derive2 { name="someKfwer"; version="1.2"; sha256="0widny5l04ja91fy16x4giwrabwqhx0fs3yl48pv9xh4zj6sx563"; depends=[]; }; someMTP = derive2 { name="someMTP"; version="1.4.1"; sha256="19bsn8rny1vv9343bvk8xzhh82sskl0zg0f5r59g9k812q5llchn"; depends=[]; }; somebm = derive2 { name="somebm"; version="0.1"; sha256="1iwwc94k6znh4d3bbjnvwp4chc4wg0iy4v2f99cs4jasrsimb4p8"; depends=[]; }; - sommer = derive2 { name="sommer"; version="3.1"; sha256="0b10hfny4xl00n16fj7mzm6qsd0548q02sir3sskqr13zhzqwr77"; depends=[MASS Matrix]; }; + sommer = derive2 { name="sommer"; version="3.2"; sha256="0kqk04db3s3c9ba1gy4k2gj4s6lzyns3lmj463d9v9gpk5wwq77m"; depends=[data_table lattice MASS Matrix]; }; somplot = derive2 { name="somplot"; version="1.6.4"; sha256="06c8p2lqz3yxmxdl7ji8a3czvxnsbl7bwyiig76pkwc3a5qqfbb9"; depends=[hexbin]; }; sonar = derive2 { name="sonar"; version="1.0.2"; sha256="1f0f5iqi3y9vnxyym14nm8dqxw0vcpnxmvvkx4sm612i4fclg1f9"; depends=[]; }; sonicLength = derive2 { name="sonicLength"; version="1.4.4"; sha256="1v46xzx3jxxxs2biyrq6xbv2lhpz1i95la93hj6dl4jfyikmx0im"; depends=[]; }; @@ -10740,25 +10955,25 @@ in with self; { sotu = derive2 { name="sotu"; version="1.0.2"; sha256="0aqwkawaydsm91hz13msjg1a5llg7xmv6hxmfmsaganrl7iaym3c"; depends=[]; }; sound = derive2 { name="sound"; version="1.4.5"; sha256="1kbbb614d0fmj9l0yjiwf5yqnl7sby4xklp7qwp6rwjvq9bnm0ab"; depends=[]; }; soundecology = derive2 { name="soundecology"; version="1.3.2"; sha256="1ig04hdxwailsp4lv5y9q73x7vb6hl4dw9zlb05gbccvid5vmdsh"; depends=[ineq oce pracma seewave tuneR vegan]; }; - soundgen = derive2 { name="soundgen"; version="1.1.0"; sha256="0fqdxbjjn1mz4g4yq1mwfjghyfnlzrdbcpnkas4rasyg8npmm54s"; depends=[dtw mvtnorm phonTools plyr reshape2 seewave shiny tuneR zoo]; }; + soundgen = derive2 { name="soundgen"; version="1.1.2"; sha256="13n3gr3hwy3ph9kb4fmx87qwndijxf04nvy13sjaazmvq9q9dfbg"; depends=[dtw mvtnorm phonTools plyr reshape2 seewave shiny tuneR zoo]; }; source_gist = derive2 { name="source.gist"; version="1.0.0"; sha256="03bv0l4ccz9p41cjw18wlz081vbjxzfgq3imlhq3pgy9jdwcd8fp"; depends=[RCurl rjson]; }; sourceR = derive2 { name="sourceR"; version="1.0.1"; sha256="01qxa44s9szaxl0rdcx4p0wn4vby17hdzdjzpsbls3prsnr0jaad"; depends=[assertthat cluster dplyr gplots gtools hashmap R6 reshape2 SPIn tensorA]; }; sourcetools = derive2 { name="sourcetools"; version="0.1.6"; sha256="0l8c6fql82cb246qh7hfgxb4s35qn0qfgy6dzvkx0zkz1cpqvx69"; depends=[]; }; - sp = derive2 { name="sp"; version="1.2-5"; sha256="09yydnacp33yx0kn537k96fjlbf75fjafqfknpa5gvci4l888bqd"; depends=[lattice]; }; + sp = derive2 { name="sp"; version="1.2-7"; sha256="0q04yfgyjannsrzl0ppwcv0simrxrrbx2iz5mzaafc5x38zf0q3d"; depends=[lattice]; }; sp23design = derive2 { name="sp23design"; version="0.9"; sha256="1ihvcld19cxflq2h93m9k9yaidhwixvbn46fqqc1p3wxzplmh8bs"; depends=[mvtnorm survival]; }; - spAddins = derive2 { name="spAddins"; version="0.1.7"; sha256="1ci246770j40zzmsjwjqwkwi6b2w5qwb0n4f4wah5rjf6zjwkd5r"; depends=[rstudioapi]; }; + spAddins = derive2 { name="spAddins"; version="0.2.0"; sha256="19wbcghcf0f9qvqy92jhsdcpmd9b4lkhxndvr71cyhzga539lh1n"; depends=[magrittr purrr rstudioapi stringr]; }; spBayes = derive2 { name="spBayes"; version="0.4-1"; sha256="1cypl3kvcr7nwdkq59zpdhkasz0z5r2gk8hr6wf1a1992k8c33ag"; depends=[abind coda Formula magic]; }; - spBayesSurv = derive2 { name="spBayesSurv"; version="1.1.1"; sha256="0pcfy3w2aqld10w9jdcizcy0rdpmdaj8z7qwpam4s2f6sap1q26b"; depends=[coda fields MASS Rcpp RcppArmadillo survival]; }; - spData = derive2 { name="spData"; version="0.2.6.7"; sha256="0yyg9lfi2xxpqsdbd4ci26ifmm4s4510wj5r09j403l2inyz4gbp"; depends=[]; }; - spMC = derive2 { name="spMC"; version="0.3.8"; sha256="1glkyv6wmh766ssdlm4z7dck32r0284kwah0ksmmkwxkfw1qx7xb"; depends=[]; }; - spMaps = derive2 { name="spMaps"; version="0.1"; sha256="0cmz87cd95c04qw8czlf9a0ds48nwa1z8iqq330y1lmakp24kwij"; depends=[sp]; }; + spBayesSurv = derive2 { name="spBayesSurv"; version="1.1.2"; sha256="0m1432gkjkkqmzhksv19yca1wyvp5vjwcmpavhiik4ghfx72rgrr"; depends=[coda fields MASS Rcpp RcppArmadillo survival]; }; + spData = derive2 { name="spData"; version="0.2.7.4"; sha256="1gkzcd9sy7ca2s8xa45vn0j4ismb28i8vjskw2fldfl3aglss4qp"; depends=[]; }; + spMC = derive2 { name="spMC"; version="0.3.9"; sha256="10cvha5j2pi3b2qiq3jbrc10yi84a595zlg0wshx3wrzxb1rim85"; depends=[]; }; + spMaps = derive2 { name="spMaps"; version="0.2"; sha256="1rrrkbj9bvs217dgvwm686zczcwjqcbq0x268cwl6qnsm39mxzzf"; depends=[raster rgeos sp]; }; spNNGP = derive2 { name="spNNGP"; version="0.1.1"; sha256="0b55arvy5xr592bs2082djyzaa48jbv0y85h7nnj479f8c31grqp"; depends=[coda Formula RANN]; }; spTDyn = derive2 { name="spTDyn"; version="2.0"; sha256="0wandd5iqyqb474096lky04rrgj31gnyqnlmgw8ypxsypd0gqdy0"; depends=[coda sp spacetime spTimer]; }; - spTest = derive2 { name="spTest"; version="0.2.4"; sha256="1pfyrim6m0pcwsxpin9z09569yzil49hsz5mndp723c9wkk8vn5h"; depends=[geoR sp]; }; + spTest = derive2 { name="spTest"; version="0.2.5"; sha256="11x2wq3031mqbj4n6hvb4l3sp4382qankdl1v1qh7ab2xa0h6xw8"; depends=[geoR sp]; }; spThin = derive2 { name="spThin"; version="0.1.0"; sha256="06qbk0qiaw7ly1ywbr4cnkmqfasymr7gbhvq8jjbljm0l69fgjpp"; depends=[fields knitr spam]; }; spTimer = derive2 { name="spTimer"; version="3.0-1"; sha256="1vl26d248642grca63kv1rsghqscchkhbybby0fgfg58v042qbs5"; depends=[coda sp spacetime]; }; spa = derive2 { name="spa"; version="2.0"; sha256="1np50qiiy3481xs8w0xfmyfl3aypikl1i1w8aa5n2qr16ksxrnq3"; depends=[cluster MASS]; }; - spaMM = derive2 { name="spaMM"; version="2.2.0"; sha256="1yrzcr6s2ajan5y2kb5c3llfvy0m26a3cgx149zbn51xivwjg5dn"; depends=[MASS Matrix nlme nloptr proxy Rcpp RcppEigen]; }; + spaMM = derive2 { name="spaMM"; version="2.3.0"; sha256="1625nplyxklviifhalfwylc0cr2qlhrr57zhm3dj3n2daxjhid87"; depends=[MASS Matrix nlme nloptr proxy Rcpp RcppEigen]; }; spaa = derive2 { name="spaa"; version="0.2.2"; sha256="163iipz1knxx1lzby9a3n1f014yqkf25z1wpwwy4gbx7sia499d5"; depends=[]; }; space = derive2 { name="space"; version="0.1-1"; sha256="1qigfz62xz47hqi43aii3yr4h7ddvaf11a5nil7rqprgkd0k6mv3"; depends=[]; }; spaceExt = derive2 { name="spaceExt"; version="1.0"; sha256="0lp8qmb7vcgxqqpsi89zjy7kxpibg3x2mq205pjmsrbbh7saqzr4"; depends=[glasso limSolve]; }; @@ -10766,12 +10981,13 @@ in with self; { spacetime = derive2 { name="spacetime"; version="1.2-1"; sha256="1i6yrmyr9vc5lr99w7qhr0jqdx97ckjqay5g0lqdrk98sygpfl4g"; depends=[intervals lattice sp xts zoo]; }; spacodiR = derive2 { name="spacodiR"; version="0.13.0115"; sha256="0c0grrvillpwjzv6fixviizq9l33y7486ypxniwg7i5j6k36nkpl"; depends=[colorspace picante Rcpp]; }; spacom = derive2 { name="spacom"; version="1.0-5"; sha256="0b6yh4q9f0ibwlwyckwaya9m645j22x6bdz9mz3chass8qza6bls"; depends=[foreach iterators lme4 Matrix nlme spdep]; }; - spacyr = derive2 { name="spacyr"; version="0.9.3"; sha256="1fbb7sdcq97jmhknv430awcsq0dqwzmpw7w7ackg0frdjcwv7rk0"; depends=[data_table reticulate]; }; + spacyr = derive2 { name="spacyr"; version="0.9.6"; sha256="0s4gn2nfd2bamvpzk68n4ym1nylzay8hrgkax6c9ghhvi3p7rch7"; depends=[data_table reticulate]; }; spaero = derive2 { name="spaero"; version="0.2.0"; sha256="0srkah89z23j30y2smlnyhf97mm123apma8vgmgfarbx188bkwpn"; depends=[]; }; - spam = derive2 { name="spam"; version="2.1-1"; sha256="1j6yppyf3sngpmq99w0d3j8wlrmjsfsixw902rl6339w985b1lxc"; depends=[dotCall64]; }; - spam64 = derive2 { name="spam64"; version="2.1-1"; sha256="0l34z630q749b27w033n504x6lspgz1d8jrw4cnzs6jkrlz6paw7"; depends=[]; }; + spam = derive2 { name="spam"; version="2.1-2"; sha256="06c2bal2hj4qjb65qagfq6icy52cjn8sn8yl0c0dbzcz4gmidvy2"; depends=[dotCall64]; }; + spam64 = derive2 { name="spam64"; version="2.1-2"; sha256="15cjdz71fh04hcqjn93lnnqbmyfgm67p1x5lyiiq3wz7k1fk5a0h"; depends=[]; }; spanel = derive2 { name="spanel"; version="0.1"; sha256="1riyvvfij277mclgik41gyi01qv0k466wyk2wbqqhlvrlj79yzsc"; depends=[]; }; - spant = derive2 { name="spant"; version="0.6.0"; sha256="16gpaga9zppc9jz9wy3jp8r944q477yx56mlyrb19ngiy2qsx0vw"; depends=[abind complexplus foreach matrixcalc minpack_lm nnls plyr pracma signal smoother stringr svd tkrplot]; }; + spanish = derive2 { name="spanish"; version="0.3.2"; sha256="1dg4wnvxhybhagag9xx27af6760dlclaivx27mfxywfha312xfpn"; depends=[magrittr xml2]; }; + spant = derive2 { name="spant"; version="0.7.0"; sha256="1lcv8lblc6arbmjxy6mskr2iprxij7b4sgn7xm9imvcqx5jibzjq"; depends=[abind complexplus foreach matrixcalc minpack_lm nnls plyr pracma signal smoother stringr svd tkrplot]; }; sparc = derive2 { name="sparc"; version="0.9.0"; sha256="0jsirrkmvrfxav9sphk8a4n52fg0d1vnk3i8m804i4xl0s7lrg8s"; depends=[]; }; sparcl = derive2 { name="sparcl"; version="1.0.3"; sha256="1348pi8akx1k6b7cf4bhpm4jqr5v8l5k086c7s6rbi5p6qlpsrvz"; depends=[]; }; spareserver = derive2 { name="spareserver"; version="1.0.1"; sha256="094q5i6v4v37hzfdyps8zni394z312r802hl04jw0xzzps922rq4"; depends=[assertthat httr pingr]; }; @@ -10780,11 +10996,12 @@ in with self; { sparkTable = derive2 { name="sparkTable"; version="1.3.0"; sha256="1fc2nihxfrjpmxm9g9296mz5czd3ydvi1v37g8qgb20j7b73c64h"; depends=[boot Cairo ggplot2 gridExtra pixmap Rglpk RGraphics shiny StatMatch xtable]; }; sparkavro = derive2 { name="sparkavro"; version="0.1.0"; sha256="0jihqvjs7dgyxhyzhsbki7khy7fjniwf9xwlangzqfi4rcan8g7x"; depends=[DBI dplyr sparklyr]; }; sparkline = derive2 { name="sparkline"; version="2.0"; sha256="0lrr1lm7603di7x3mf53cp13d9ssjh9gmb43wa6z9yqapis2djm2"; depends=[htmltools htmlwidgets]; }; - sparklyr = derive2 { name="sparklyr"; version="0.6.4"; sha256="1gsjr49dr70mhbx8znql85sp08m9cabik13gs8kg0hb0zm9hmr11"; depends=[assertthat base64enc broom config DBI dbplyr digest dplyr httr jsonlite lazyeval openssl rappdirs readr rlang rprojroot rstudioapi shiny withr xml2]; }; + sparklyr = derive2 { name="sparklyr"; version="0.7.0"; sha256="0lyn5xlz7a826dmlihn6jp2kq72abr3jy0ylsa4lvk9sj3acy988"; depends=[assertthat base64enc broom config DBI dbplyr digest dplyr httr jsonlite lazyeval openssl rappdirs readr rlang rprojroot rstudioapi shiny withr xml2]; }; sparktex = derive2 { name="sparktex"; version="0.1"; sha256="0r6jnn9fj166pdhnjbsaqmfmnkq0qr1cjprihlnln9jad05mrkjx"; depends=[]; }; sparkwarc = derive2 { name="sparkwarc"; version="0.1.1"; sha256="07b66f12fz19042kj7d9p32j9sy3103zvil36xkf21hm9iyg6xph"; depends=[DBI sparklyr]; }; sparr = derive2 { name="sparr"; version="2.1-14"; sha256="1zj94csfb59sk1klc6j34sfj5a9khm62qbpk33jwlkb9slvm5fcx"; depends=[doParallel foreach misc3d spatstat spatstat_utils]; }; sparseBC = derive2 { name="sparseBC"; version="1.1"; sha256="1w60n2875n809lbrn0hd4kdmsyfd64aikgzxchza8b59x77l0psy"; depends=[fields glasso]; }; + sparseEigen = derive2 { name="sparseEigen"; version="0.1.0"; sha256="0vqcy61rarmp3liz8fr3vs3y40hkb3wfw89b5xsj1byaiap4772s"; depends=[]; }; sparseFLMM = derive2 { name="sparseFLMM"; version="0.2.0"; sha256="0r7080d2s5vrcwi4h11iiapmdl0l59kd0j8r1avmw9x0d0qw6lh8"; depends=[data_table MASS Matrix mgcv refund]; }; sparseHessianFD = derive2 { name="sparseHessianFD"; version="0.3.3.2"; sha256="0475zyij6h19diaalnkj39j4n0lx6mgfq3sl479mlngf9fhr9zvx"; depends=[Matrix Rcpp RcppEigen]; }; sparseLDA = derive2 { name="sparseLDA"; version="0.1-9"; sha256="1k3sw9kc40yxnfss4vrsx34qxmv8ssddyhbfjhxrdldvblhbwchb"; depends=[elasticnet MASS mda]; }; @@ -10795,24 +11012,24 @@ in with self; { sparsebn = derive2 { name="sparsebn"; version="0.0.5"; sha256="19315nzj9pz98498amlhas6ii3vwvn3qxz5a6136nh2xfwfg2bhc"; depends=[ccdrAlgorithm discretecdAlgorithm sparsebnUtils]; }; sparsebnUtils = derive2 { name="sparsebnUtils"; version="0.0.5"; sha256="0hdzrp2wcjl849v7np7ybmyp15zjfqr8gkwhij2qjrpprf7z8s57"; depends=[Matrix nnet]; }; sparsediscrim = derive2 { name="sparsediscrim"; version="0.2.4"; sha256="1sa3yssncbpx8yid5wrnxdq7jl3hy5rskyh60v5x592ijcb2mif0"; depends=[bdsmatrix corpcor dplyr ggplot2 mvtnorm]; }; - sparsenet = derive2 { name="sparsenet"; version="1.2"; sha256="106a2q4syrcnmicrx92gnbsf2i5ml7pidwghrpl6926glj59j248"; depends=[glmnet shape]; }; + sparseinv = derive2 { name="sparseinv"; version="0.1.1"; sha256="1c0vkfq4kh78rs8x484jyi29rcswq9slljxvvc7km6qlz1mnrzlm"; depends=[Matrix spam]; }; sparsepp = derive2 { name="sparsepp"; version="0.2.0"; sha256="0ibadyv7lchxw3y1dspjnbhc4pin4dxwqj9rdrdxfbvlx0i3jgxr"; depends=[]; }; sparsereg = derive2 { name="sparsereg"; version="1.2"; sha256="1ipsang2fppmjx4h5ljgzx3c44z3lggc376ghrqqgmxb5ql8bcp3"; depends=[coda ggplot2 GIGrvg glmnet gridExtra MASS MCMCpack msm Rcpp RcppArmadillo VGAM]; }; sparsestep = derive2 { name="sparsestep"; version="1.0.0"; sha256="0f3wrwiyn990sn3x9r50zgs8cr76nmyisdc7qismgx1nn5yx5z0g"; depends=[Matrix]; }; - sparsesvd = derive2 { name="sparsesvd"; version="0.1-1"; sha256="09qpky8vxkpycj6c4vn3nqlidhblgksh3n6w8sww4yhn0pm3rzn5"; depends=[Matrix]; }; + sparsesvd = derive2 { name="sparsesvd"; version="0.1-4"; sha256="1yf373552wvdnd65r7hfcqa3v29dqn7jd4cn431mqd2acnqjrsam"; depends=[Matrix]; }; sparsevar = derive2 { name="sparsevar"; version="0.0.10"; sha256="069r0kbypmx7pw3z2v9l17qidw3d73rzf5zs6yn1adyvpsddjxi8"; depends=[doParallel flare ggplot2 glmnet Matrix mvtnorm ncvreg picasso reshape2]; }; sparsio = derive2 { name="sparsio"; version="1.0.0"; sha256="12nbydgzl3qlanlsfdy8bvg6rxa439lv0z0vbyqssqwky3mmg5c3"; depends=[Matrix Rcpp]; }; spartan = derive2 { name="spartan"; version="3.0.0"; sha256="1q78l04nbrllrsk14haln5s829rkkhkhmb34xzfgyd8glbi7z4ay"; depends=[e1071 ggplot2 gplots lhs mco mlegp neuralnet plotrix psych randomForest XML]; }; spass = derive2 { name="spass"; version="1.1"; sha256="1kr2ixyvsm82h2brdm51bzll69632mkj9f88a2ny0pcyqrbggg83"; depends=[geepack MASS multcomp mvtnorm Rcpp]; }; spatcounts = derive2 { name="spatcounts"; version="1.1"; sha256="0rp8054aiwc62r1m3l4v5dh3cavbs5h2yb01453bw9rwis1pj2qm"; depends=[]; }; spate = derive2 { name="spate"; version="1.5"; sha256="1hlh4iwx1lrl8r2gag33z2xdv6k4hg86ch4f0jlqnqkhm9hapshf"; depends=[mvtnorm truncnorm]; }; - spatgraphs = derive2 { name="spatgraphs"; version="3.1-3"; sha256="0lbxc4zj7yamcr8jak51a2alcjqlk7sca8p3z3ysp3a8f3srqwkj"; depends=[Matrix Rcpp]; }; + spatgraphs = derive2 { name="spatgraphs"; version="3.2-1"; sha256="0n7f3r4ahv1w5mwx5mnib3g4263kz73rh1fcfk5wb12y52x8n1iz"; depends=[Matrix Rcpp]; }; spatial = derive2 { name="spatial"; version="7.3-11"; sha256="04aw8j533sn63ybyrf4hyhrqm4058vfcb7yhjy07kq92mk94hi32"; depends=[]; }; spatial_gev_bma = derive2 { name="spatial.gev.bma"; version="1.0"; sha256="1rjn0gsbgiv69brhnm0zj25ya3nyfh4yf6jizng85mvss3viv3hj"; depends=[coda msm SpatialExtremes]; }; spatial_tools = derive2 { name="spatial.tools"; version="1.4.8"; sha256="0qnsjfx974na87p3n7sp711sc13v6dmpvb2kjpvscixs8rsy03y1"; depends=[abind doParallel foreach iterators mmap raster rgdal]; }; spatialClust = derive2 { name="spatialClust"; version="1.1.1"; sha256="042yrmh1rb0hxynxlbdpcissgy9zazs5aqx7vj388ibynzijck3r"; depends=[ggplot2 maptools rgeos sp]; }; spatialCovariance = derive2 { name="spatialCovariance"; version="0.6-9"; sha256="1m86s9a059spp97y37dcirrgjshcqzpdj11cq92vji624w4nrhlb"; depends=[]; }; - spatialEco = derive2 { name="spatialEco"; version="0.1-7"; sha256="0l8nshsapbgfzli1rpls3j3s8gyqy2nzsgqf2x4v1r699r419i5k"; depends=[cluster MASS RANN raster RCurl rgdal rgeos rms SDMTools sp SpatialPack spatstat spdep yaImpute]; }; + spatialEco = derive2 { name="spatialEco"; version="1.0-0"; sha256="0q65gcrbd62bbxlqr7338jm9ra6iq1b5gccb221w98860d2wjz9x"; depends=[cluster MASS RANN raster RCurl readr rgdal rgeos rms SDMTools sp SpatialPack spatstat spdep yaImpute]; }; spatialTailDep = derive2 { name="spatialTailDep"; version="1.0.2"; sha256="107yldc43pgbadxdisnc7vq8vyvcps1b1isyvxd0kyf59xldiq47"; depends=[cubature mvtnorm SpatialExtremes]; }; spatialfil = derive2 { name="spatialfil"; version="0.15"; sha256="01fbn9zblz7rjsgqy3ikdqpf0p0idvb6m96mf7m7qi2ps5f48vzj"; depends=[abind fields]; }; spatialkernel = derive2 { name="spatialkernel"; version="0.4-23"; sha256="0kvhirh7afk2gfy21pa6117yk6kzbaf2dxfkr1ax3b554rnrv4p0"; depends=[spatstat]; }; @@ -10820,16 +11037,16 @@ in with self; { spatialprobit = derive2 { name="spatialprobit"; version="0.9-11"; sha256="1cpxxylc0pm7h9m83m2cklrh4jni5x79r5m5gibxi6viahwxn9kc"; depends=[Matrix mvtnorm spdep tmvtnorm]; }; spatialsegregation = derive2 { name="spatialsegregation"; version="2.44"; sha256="02s75q6ylzm6xzr1q23fhps3svlb0ix86dzgr23wf42369gs7h0g"; depends=[spatstat]; }; spatialwarnings = derive2 { name="spatialwarnings"; version="1.0"; sha256="1j8zr9pv769ji9ynzrhah3nd56mjjap450c28g26ff00l3kr9l03"; depends=[ggplot2 moments plyr poweRlaw Rcpp RcppArmadillo reshape2 tidyr VGAM]; }; - spatstat = derive2 { name="spatstat"; version="1.54-0"; sha256="1v9zmi6z2x4yzxmnpn0nbxxfxmzp0d6fjyd3wbl3jzads5bq8q2l"; depends=[abind deldir goftest Matrix mgcv nlme polyclip rpart spatstat_data spatstat_utils tensor]; }; + spatstat = derive2 { name="spatstat"; version="1.55-0"; sha256="05mpw0zdw4mdlkcf8q9h0nmviq37ihwpgl472wyxqw69l93vk4k3"; depends=[abind deldir goftest Matrix mgcv nlme polyclip rpart spatstat_data spatstat_utils tensor]; }; spatstat_data = derive2 { name="spatstat.data"; version="1.2-0"; sha256="0nzw5y1in36mib5g4v076b9jii71jjidxajn3n8v67lvl48dmwgm"; depends=[spatstat_utils]; }; - spatstat_local = derive2 { name="spatstat.local"; version="3.5-6"; sha256="0yb3k2szk2z61h2scyj4h78y13qvbd9b1hvwp9n2983w77y0k5dz"; depends=[spatstat spatstat_utils tensor]; }; + spatstat_local = derive2 { name="spatstat.local"; version="3.5-7"; sha256="1sdcx4qxv0z5q97rljn34mssbs4w6qbqxhn71xmkns01xypl1wr2"; depends=[spatstat spatstat_utils tensor]; }; spatstat_utils = derive2 { name="spatstat.utils"; version="1.8-0"; sha256="053j67mrnjcw1mdbm3qjvf67hrfnhsma4770r7l67bs4xys2qhfg"; depends=[]; }; spatsurv = derive2 { name="spatsurv"; version="1.1"; sha256="0fakhz2qc5vb7ym2ik7hilv8g5fn3z7s16hzngq1n591xza5b74g"; depends=[fields geostatsp iterators lubridate Matrix OpenStreetMap RandomFields raster RColorBrewer rgeos rgl sp spatstat stringr survival]; }; spbabel = derive2 { name="spbabel"; version="0.4.8"; sha256="1f0lradf7a3fjkdhbviw24awpqj1pzw1wfvigrqhnmf0jjw3nng3"; depends=[dplyr sp tibble]; }; spc = derive2 { name="spc"; version="0.5.4"; sha256="1ii848jcpsg5jij1i17flhz4v5vgsb8j6iijgpha7sigmj7gynk3"; depends=[]; }; spc4sts = derive2 { name="spc4sts"; version="0.2.1"; sha256="1mwgqj9gph3fzvmqp03khi541g13ljx8xn09ji9qcjl6j032rk2p"; depends=[gridExtra rpart]; }; spcadjust = derive2 { name="spcadjust"; version="1.1"; sha256="016i3zaaq800x4niz4fixa57nfj1m10sz5xskff4vq4v9fjn2sl0"; depends=[]; }; - spcosa = derive2 { name="spcosa"; version="0.3-6"; sha256="0zj5yr0by1pbixs4z6w3c6yr1k55k5gqmvjkwiq2gsgq00vs7q94"; depends=[ggplot2 rJava sp]; }; + spcosa = derive2 { name="spcosa"; version="0.3-7"; sha256="11q6zr4y0hv1vnhl45g38f1906pq9a695ynn6yfkzlpz1kbf2jma"; depends=[ggplot2 rJava sp]; }; spcov = derive2 { name="spcov"; version="1.01"; sha256="1brmy64wbk56bwz9va7mc86a0ajbfy09qpjafyq2jv7gm7a35ph5"; depends=[]; }; spcr = derive2 { name="spcr"; version="2.0"; sha256="1n0lva9brpzxysw6p7l88cj8d46jng2zd7zvr5brqldzd3yl63l9"; depends=[]; }; spd = derive2 { name="spd"; version="2.0-1"; sha256="00zxh4ri47b61jkcjf5idl9hhlfld6rhczsnhmjsax59884f2i8m"; depends=[KernSmooth]; }; @@ -10844,16 +11061,17 @@ in with self; { speccalt = derive2 { name="speccalt"; version="0.1.1"; sha256="0j7rbidmmx78vgwsqvqjbjjh92fnkf2sdx0q79xlpjl2dph7d6l6"; depends=[]; }; speciesgeocodeR = derive2 { name="speciesgeocodeR"; version="1.0-4"; sha256="033877l9sxcvvzpyf9aw19sj8qfscim663j2y2az8bl9c79xw4ph"; depends=[maps raster sp]; }; specificity = derive2 { name="specificity"; version="0.1.1"; sha256="1gvlyx9crkzm3yyp1ln5j9czcg83k7grm6ijabhl919gjjr1p60n"; depends=[car]; }; - specmine = derive2 { name="specmine"; version="1.0"; sha256="1dd8ymyq3894br2fv54r1z93aifh2iiz94a3r4xj1qq07005hr29"; depends=[baseline caret ChemoSpec compare ellipse genefilter GGally ggdendro ggplot2 hyperSpec impute MAIT MASS Metrics pcaPP pls qdap RColorBrewer rgl scatterplot3d xcms]; }; + specklestar = derive2 { name="specklestar"; version="0.0.1.7"; sha256="04vm989yi31vqnf5rs6cdyikm4jzfd9njxh0ls3dvjrg19ipsnmn"; depends=[Rcpp]; }; + spectacles = derive2 { name="spectacles"; version="0.5-0"; sha256="0i1kzp0fpljcvkws15w3iwgpjig2llhlrfs5blk562kgb7vwshqm"; depends=[baseline epiR ggplot2 plyr reshape2 signal stringr]; }; spectral = derive2 { name="spectral"; version="1.0.1"; sha256="0mawgxz1gbzgb3lxm6gfbv3wan0ykziprqym8ajvdjsdq4fwkk2m"; depends=[rasterImage Rcpp]; }; spectral_methods = derive2 { name="spectral.methods"; version="0.7.2.133"; sha256="0k8kpk94d2qzqdk3fnf6h9jmwdyp8h3klr0ilm5siwq5wkcz339l"; depends=[abind DistributionUtils foreach JBTools ncdf_tools nnet raster RColorBrewer RNetCDF Rssa]; }; spectralGP = derive2 { name="spectralGP"; version="1.3.3"; sha256="1jf09nsil4r90vdj7n1k6ma9dzzx3bwv0fa7svil9pxrd2zlbkbs"; depends=[]; }; - spectrolab = derive2 { name="spectrolab"; version="0.0.3"; sha256="0ki6z6ns2q698if58xhhsa5zlvmrgiprzyn2ass06lpjwza1inj4"; depends=[devtools prospectr RColorBrewer shiny shinyjs]; }; + spectrolab = derive2 { name="spectrolab"; version="0.0.4"; sha256="1vmrpszjwl9iq8z6p8rhh560l79iya6rah7jld8ykvm9irwdf15h"; depends=[devtools prospectr RColorBrewer shiny shinyjs]; }; speedglm = derive2 { name="speedglm"; version="0.3-2"; sha256="1b25zimk0z7ad62yacqdg0zk0qs0jja4i918ym942xfw4j1z3jjz"; depends=[MASS Matrix]; }; - spef = derive2 { name="spef"; version="1.0-5"; sha256="0hbb2vmgx5x135kvb5c525q78m8ccpv4j6hv16v31zka2fjwcj8z"; depends=[BB ggplot2 nleqslv plyr sm SQUAREM survival]; }; + spef = derive2 { name="spef"; version="1.0-6"; sha256="1an9p914p457bm4wl82bpqa8jq9ibyrrc1jnm5ppr5ww5qp6yifq"; depends=[BB ggplot2 nleqslv plyr sm SQUAREM survival]; }; speff2trial = derive2 { name="speff2trial"; version="1.0.4"; sha256="0dj5mh2sdp6j4ijgv14hjr39rasab8g83lx1d9y50av11yhbf2pw"; depends=[leaps survival]; }; spellcheckr = derive2 { name="spellcheckr"; version="0.1.2"; sha256="09snc1ymzr4njnr3w502b84dqwjjd414higjxqi48jvh27br5k1l"; depends=[data_table dplyr stringr]; }; - spelling = derive2 { name="spelling"; version="1.0"; sha256="0r293l451b0fxs6yf5ygak6s9m3alsc1cnpwhzf091blhi76s2jr"; depends=[commonmark hunspell knitr xml2]; }; + spelling = derive2 { name="spelling"; version="1.1"; sha256="10zhzbpyjw5lkg4iyjwgs5xp2c8bgwyzjg146fcml6cjs6xhl8ni"; depends=[commonmark hunspell knitr xml2]; }; sperich = derive2 { name="sperich"; version="1.5-7"; sha256="1apgq5nsl6nw674dy7bc7r7z962wcmqsia5n67a8n6c5lcgcif3f"; depends=[foreach rgdal SDMTools sp]; }; sperrorest = derive2 { name="sperrorest"; version="2.1.1"; sha256="0rbfr6dg8dx6lm3npsrinr2vxxsq0f3xwprzl0fyzabdhd82na4y"; depends=[doFuture foreach future gdata magrittr pbapply pbmcapply purrr ROCR rpart stringr]; }; spew = derive2 { name="spew"; version="1.3.0"; sha256="09g8j5v5k455c3kqm1fn09ql3x34xy22igicakwl99s8gsln7v3p"; depends=[maptools plyr sp]; }; @@ -10866,16 +11084,17 @@ in with self; { sphereplot = derive2 { name="sphereplot"; version="1.5"; sha256="1i1p20h95cgw5wqp9bwfs9nygm4dxzsggz08ncjs1xrsvhhq9air"; depends=[rgl]; }; sphet = derive2 { name="sphet"; version="1.6"; sha256="0149wkak7lp2hj69d83rn05fzh9bsvyc1kyg0d3b69sx92kqlwr0"; depends=[Matrix nlme sp spdep]; }; spi = derive2 { name="spi"; version="1.1"; sha256="0gc504f7sji5x0kmsidnwfm7l5g4b1asl3jkn2jzsf2nvjnplx1z"; depends=[]; }; + spider = derive2 { name="spider"; version="1.5.0"; sha256="1y034v42jxjl3vj87iz5kaizq7fwppmn56z7yyvrrmk5ps4nqr1j"; depends=[ape pegas]; }; spiderbar = derive2 { name="spiderbar"; version="0.2.1"; sha256="1mm9g58riyjxpfwjj28shlw9zlycsgcxl6xw8im0gm815v2plyhv"; depends=[Rcpp]; }; spiders = derive2 { name="spiders"; version="1.2"; sha256="1qklm178bgkgpvrjf024jphsdh9can8300sf0702l4h0rk2daqbq"; depends=[plyr]; }; spikeSlabGAM = derive2 { name="spikeSlabGAM"; version="1.1-11"; sha256="1f16jvdj6kbiiypnbbj10nj7l88kkrxasrribqpjv7ai62dlximn"; depends=[akima cluster coda ggplot2 gridExtra MASS MCMCpack mvtnorm R2WinBUGS reshape scales]; }; spikes = derive2 { name="spikes"; version="1.1"; sha256="080sna0sgii61kai5sirs6cijnvk1012djwfw705di9y2lvk1hqk"; depends=[emdbook]; }; spikeslab = derive2 { name="spikeslab"; version="1.1.5"; sha256="0dzkipbrpwki6fyk4hqlql3yhadwmclgbrx00bxahrmlaz1vjzh2"; depends=[lars randomForest]; }; - spind = derive2 { name="spind"; version="2.1.1"; sha256="0d0pjjipnn1jkdi70npfqssz7m72h68dshg7gzpch8ycq8iqz9sz"; depends=[gee geepack ggplot2 lattice MASS RColorBrewer rje sp splancs stringr waveslim]; }; + spind = derive2 { name="spind"; version="2.1.2"; sha256="0z00fc9r6aycv5v9ms7v64xszfc58wvy6y7bd2z0xima1gpppq2r"; depends=[gee geepack ggplot2 lattice MASS RColorBrewer rje splancs stringr waveslim]; }; spinyReg = derive2 { name="spinyReg"; version="0.1-0"; sha256="0kbg7rncrrl5xdsaw9vj909x97mfp77mjnvghczplmnwmmanyn72"; depends=[]; }; splancs = derive2 { name="splancs"; version="2.01-40"; sha256="0qs3lwyllrkahnvqbm8bzrf03bm9zk4s7p1n19s638y4xf0l6x3r"; depends=[sp]; }; - splashr = derive2 { name="splashr"; version="0.4.0"; sha256="0k6ylq4vrs4ymr8cjvwm4id1kkng76hlg4bzxak4sd9sjk914xp2"; depends=[clipr curl docker formatR HARtools httr jsonlite lubridate magick openssl purrr scales stringi xml2]; }; - splines2 = derive2 { name="splines2"; version="0.2.6"; sha256="1a58pl1a0lc7ljs9q9p3licpzzfr75lcahfzc3hdzhg3zn6m56cx"; depends=[]; }; + splashr = derive2 { name="splashr"; version="0.4.1"; sha256="1gydnl6qdkqxvgzy3j6n8y4nan4wz6p7wybcgnm5p37n7q6m2rhk"; depends=[curl docker formatR HARtools httr jsonlite lubridate magick openssl purrr scales stringi xml2]; }; + splines2 = derive2 { name="splines2"; version="0.2.7"; sha256="1hh7zd2gqmfc5xx91kjwi465yvq6lwrhgjdim1b40g6canh0ixlb"; depends=[]; }; splitfngr = derive2 { name="splitfngr"; version="0.1.1"; sha256="0gz65acnkil9xjspl2kzpzyhj7lslga9g3p0k79xh25ia6qal5ws"; depends=[lbfgs]; }; splithalf = derive2 { name="splithalf"; version="0.2.0"; sha256="1bpw8mw88aryk4n0bdm4f356wsix6npdpl91qfbwayhdh0g5302f"; depends=[plyr]; }; splitstackshape = derive2 { name="splitstackshape"; version="1.4.2"; sha256="0m9karfh0pcy0jj3dzq87vybxv9gmcrq5m2k7byxpki95apbrsmg"; depends=[data_table]; }; @@ -10886,7 +11105,7 @@ in with self; { splusTimeDate = derive2 { name="splusTimeDate"; version="2.5.0-137"; sha256="0bpzv6a05hnqnnz2znnkb3f34r56krhc595zjnn82azxj4a53njh"; depends=[]; }; splusTimeSeries = derive2 { name="splusTimeSeries"; version="1.5.0-74"; sha256="0aikw6ckc0a7lrgjlcdmqspgrx0fc4iysd7jynd2lsf1hxy4pz35"; depends=[splusTimeDate]; }; spm = derive2 { name="spm"; version="1.0.0"; sha256="0q87sbp39axmlnj15srnsysm7d9rpm5q6zic0h6hc1xwp205v0sf"; depends=[gbm gstat psy randomForest sp]; }; - spm12r = derive2 { name="spm12r"; version="2.3.1"; sha256="1fkm961phkxy5rmv2vav0a7vy9j89i0gwgfi2rjg682xl473j3gk"; depends=[git2r matlabr neurobase oro_nifti R_utils]; }; + spm12r = derive2 { name="spm12r"; version="2.7.4"; sha256="0v0zmsbzk6446n1yipz3w99n0n4yya6idff3gfyj7fgq10pcalgz"; depends=[git2r matlabr neurobase oro_nifti R_utils]; }; spmoran = derive2 { name="spmoran"; version="0.1.2"; sha256="19rl14w0zry649c3kgvrmb7bsw3dxsprf52naiqfxxs7qy3pxcm2"; depends=[doParallel fields foreach ggplot2 Matrix vegan]; }; spnet = derive2 { name="spnet"; version="0.9.1-0"; sha256="1fy0fpgz2k985brfqyza1l49y0w2j9z308n542pgmkzqsnsdscpw"; depends=[shape sp]; }; spocc = derive2 { name="spocc"; version="0.7.0"; sha256="0ar107c7snbh1iaib3xddng88861h3gc56whicx5krl3zf2xgjqa"; depends=[crul data_table jsonlite lubridate rbison rebird rgbif ridigbio rvertnet tibble whisker wicket]; }; @@ -10896,7 +11115,6 @@ in with self; { sppmix = derive2 { name="sppmix"; version="1.0.2"; sha256="1924lrxjlijlbvjbkkwb3pfa4klg49ph6hz66b7kyy1371wa2b9y"; depends=[fields ggplot2 mvtnorm Rcpp RcppArmadillo rgl spatstat]; }; spray = derive2 { name="spray"; version="1.0-3"; sha256="0zy2dwzk33cwch0pdhhsyiy169z39iij3zvvjg81gxa29pq0h1ab"; depends=[magic partitions Rcpp]; }; sprex = derive2 { name="sprex"; version="1.4.1"; sha256="14idml4mipd4wyza7hqf49ww4dparmwaps35hxm8jg5h0w1pgh7j"; depends=[swfscMisc]; }; - sprint = derive2 { name="sprint"; version="1.0.7"; sha256="1yzx1qjpxx9yc0hbm1mmha5b7aq13iflq66af597b7yj6abm7zjp"; depends=[boot e1071 ff randomForest rlecuyer]; }; sprinter = derive2 { name="sprinter"; version="1.1.0"; sha256="12v4l4fxijh2d46yzs0w4235a8raip5rfbxskl0dw7701ryh7n8g"; depends=[CoxBoost GAMBoost LogicReg randomForestSRC survival]; }; sprm = derive2 { name="sprm"; version="1.2.2"; sha256="0iyijkjnyz4yx2cmazlnhkk0f5ls0c2q2aikwlzl13w6zbj040a8"; depends=[cvTools ggplot2 pcaPP reshape2 robustbase]; }; sprsmdl = derive2 { name="sprsmdl"; version="0.1-0"; sha256="09klwsjp5w6p7dkn5ddmqp7m9a3zcmpr9vhcf00ynwyp1w7d26gi"; depends=[]; }; @@ -10906,7 +11124,7 @@ in with self; { spsurvey = derive2 { name="spsurvey"; version="3.3"; sha256="1xpjimqkrwm77amqza4713psmg86bvz08gxdi35advq4w614f2w1"; depends=[deldir foreign Hmisc MASS rgeos sp]; }; spt = derive2 { name="spt"; version="1.13-8-8"; sha256="18s74pxfmsjaj92z2a34nq90caf61s84c616yv33a0xvfvp32qr5"; depends=[]; }; sptemExp = derive2 { name="sptemExp"; version="0.1.1"; sha256="0a4y355j24sll8jmm17lh4j13k21b3nlalsxzpzx2gp5xw1x7jr6"; depends=[automap BayesX BayesXsrc bcv deldir doParallel foreach limSolve ncdf4 plyr R2BayesX raster Rcpp RcppEigen rgdal rgeos sp SpatioTemporal]; }; - sptm = derive2 { name="sptm"; version="16.7-9"; sha256="0x8824zccrwdl38jbhq8skzcvxb7a3b1zggkd7gmyjd94xvxll9k"; depends=[kyotil survey survival]; }; + sptm = derive2 { name="sptm"; version="17.12-7"; sha256="1l5in0jkqg44rr2id3h25jrfbn7x855p31z338hnmdpfwkpm2b1a"; depends=[kyotil survey survival]; }; spuRs = derive2 { name="spuRs"; version="2.0.0"; sha256="0lbc3nny6idijdaxrxfkfrn40bxfyp9z3yl9mwb1k6cyd10v5mfj"; depends=[lattice MASS]; }; spup = derive2 { name="spup"; version="0.1-1"; sha256="0iwmydvd6bwpyr4q3hk2hlvgrvpzrdhnbq0frxadwcaaap75pfv0"; depends=[gstat magrittr mvtnorm purrr raster whisker]; }; sqldf = derive2 { name="sqldf"; version="0.4-11"; sha256="0q12vsb53p2wchgp8wfz5bk08wfnm0jxjrakclj4jyy6x3a7ksff"; depends=[chron DBI gsubfn proto RSQLite]; }; @@ -10916,7 +11134,8 @@ in with self; { squash = derive2 { name="squash"; version="1.0.8"; sha256="1x1rw0ny2kas0x8y5vv9czyqmwml7s5d2c8a33vqap0x8q52r4z6"; depends=[]; }; squid = derive2 { name="squid"; version="0.1.1"; sha256="0qv9lazgiqazhq096ybmllalm2l2h794ry4p1r93c10msxg37sdp"; depends=[arm data_table ggplot2 lme4 MASS shiny]; }; sra = derive2 { name="sra"; version="0.1.1"; sha256="03nqjcydl58ld0wq1f9f5p666qnvdfxb5vhd584sdilw1b730ykd"; depends=[]; }; - srvyr = derive2 { name="srvyr"; version="0.2.2"; sha256="0k8s96hldv9jya6v0l6xls3cxr7mzxk0nqjhwizsqbqb773x95j7"; depends=[dplyr lazyeval magrittr survey tibble]; }; + srp = derive2 { name="srp"; version="1.0.0"; sha256="10mpyy8q419dw0zd96l0z8lkxpcyn1l5fvnyvr3n0lyl6jmf91sy"; depends=[fda mgcv]; }; + srvyr = derive2 { name="srvyr"; version="0.3.0"; sha256="1xxkrr15ihybgr2kv93p1plf6g8bpc2d227bwskxqx9pg7ga3cxf"; depends=[dplyr magrittr rlang survey tibble]; }; ss3sim = derive2 { name="ss3sim"; version="0.9.5"; sha256="0rdb49bfxvyh0jrqycrv1hxvh7y4kvw81jccjg5ma734x44q0vm5"; depends=[bbmle dplyr foreach ggplot2 gtools lubridate magrittr plyr r4ss]; }; ssa = derive2 { name="ssa"; version="1.2.1"; sha256="10x58c57pa9x6svm4h4xrss72ikin9lpf3ihjwmnkgnaicvsd0bx"; depends=[iterators]; }; ssanv = derive2 { name="ssanv"; version="1.1"; sha256="17a4a5azxm5h2vxia16frcwdyd36phpfm7fi40q6mnnrwbpkzsjd"; depends=[]; }; @@ -10934,29 +11153,31 @@ in with self; { ssmsn = derive2 { name="ssmsn"; version="0.2.0"; sha256="0fzqdkqhj5hh8pzcwh7i0rglgdq22a5mriyis8r1vhlkdc7n5m39"; depends=[MCMCpack]; }; sspline = derive2 { name="sspline"; version="0.1-6"; sha256="0d6ms8szyn39c7v0397d5ar2hrl8v1l2b7m8hlj37hgp70b9s55h"; depends=[]; }; sspse = derive2 { name="sspse"; version="0.5-5"; sha256="07656miqrv9g5nn3ahyfj7wb010cwkr3qjhysbsih0p43dwczq0y"; depends=[coda]; }; + ssrm_logmer = derive2 { name="ssrm.logmer"; version="0.1"; sha256="1i9rrsixl3swd04w1gf9gf1r2wb9nkvwhc8ld4bx4zxzm1031f67"; depends=[sfsmisc statmod]; }; sss = derive2 { name="sss"; version="0.1-0"; sha256="1qg56g60h8c52l8lpxihxsdgnqkxiag1mzh3p388r9hhff7g3g0k"; depends=[assertthat xml2]; }; ssvd = derive2 { name="ssvd"; version="1.0"; sha256="1fdpr38qi59ijrz16jixn6ii1hvmxfjirjqfcp7dxrqz9nx8x0sk"; depends=[]; }; ssym = derive2 { name="ssym"; version="1.5.7"; sha256="0l5d921vlhd4qwddllrgcxpq3bhivvy5ikh3ixdy3s140rzpgwrv"; depends=[Formula GIGrvg normalp numDeriv sandwich survival]; }; st = derive2 { name="st"; version="1.2.5"; sha256="0dnyfjcz37gjjv87nrabb11gw2dlkqhq3mrxdpkzahx0w0g0q0pb"; depends=[corpcor fdrtool sda]; }; stR = derive2 { name="stR"; version="0.3"; sha256="0zad25s9wp4lapkww3rdbqsd4y7p8xhz9is7avq400srxakinx7n"; depends=[foreach forecast Matrix quantreg rgl SparseM]; }; staTools = derive2 { name="staTools"; version="0.1.0"; sha256="1ksr0sjkhlwh0fkwcxjcxzbyxs1g78m4spkhrmgdpfzmk5zskqf9"; depends=[magicaxis Rcpp VGAM]; }; + stability = derive2 { name="stability"; version="0.1.0"; sha256="1hknyxzl376pvjvmbbv5fszqq2xrg154c3y5j9hy31a9402yb8xi"; depends=[dplyr lme4 magrittr matrixStats reshape2]; }; stable = derive2 { name="stable"; version="1.1.2"; sha256="11irpn0qfblzskdr71991jlmdrbqqqpszppn5pii3lr5hflqqr1d"; depends=[rmutil]; }; stabledist = derive2 { name="stabledist"; version="0.7-1"; sha256="0scar396wiq6wkbkvwp4qrxqc1m075y56p37i6iry5rw796p1i86"; depends=[]; }; stablespec = derive2 { name="stablespec"; version="0.3.0"; sha256="0m143cq0baj2lyakhr31mqk2lg78jzpdlpv2bhwz6bzzip7mqi22"; depends=[foreach ggm graph matrixcalc nsga2R polycor Rgraphviz sem]; }; stabs = derive2 { name="stabs"; version="0.6-3"; sha256="17sa0sjxf6h7gx1ga1pxhv17yrz3qisaivbf5cbc3asvshhswqg9"; depends=[]; }; stackoverflow = derive2 { name="stackoverflow"; version="0.1.2"; sha256="1psw96iscgsx11drmcnh0yjg2jjcaa4akmywh337i6gbgam8kj61"; depends=[]; }; - stacomiR = derive2 { name="stacomiR"; version="0.5.3"; sha256="0jlpg2i304xzfg418x5x9kwm2iawp2jc0q5iahmmy0kiz7283zjr"; depends=[dplyr ggplot2 gWidgets gWidgetsRGtk2 Hmisc intervals lattice lubridate magrittr mgcv RColorBrewer reshape2 RGtk2 RODBC RPostgreSQL sqldf stacomirtools stringr xtable]; }; + stacomiR = derive2 { name="stacomiR"; version="0.5.3.1"; sha256="1d05k8s8239d615vqjs6r6rx7r3vqc5gmms8iqds6lhr59bxv83g"; depends=[dplyr ggplot2 gWidgets gWidgetsRGtk2 Hmisc intervals lattice lubridate magrittr mgcv RColorBrewer reshape2 RGtk2 RODBC RPostgreSQL sqldf stacomirtools stringr xtable]; }; stacomirtools = derive2 { name="stacomirtools"; version="0.5.2"; sha256="1a33yy594699b05lb32zwx6yhmvxzwly6vvf8xzqg6lac64p26r5"; depends=[RODBC xtable]; }; stagePop = derive2 { name="stagePop"; version="1.1-1"; sha256="0949r5ibl3sb10sr5xsswxap3wd824riglrylk7fx43ynsv5hzpy"; depends=[deSolve PBSddesolve]; }; stam = derive2 { name="stam"; version="0.0-1"; sha256="1x1j45fir64kffny0nssb2hwn4rcp8gd2cjv6fw4yy0l4d0xi5iv"; depends=[np sp]; }; stampr = derive2 { name="stampr"; version="0.1"; sha256="1w7zp5n41gzahv4psdgw5a5mylcxlf12931fnjz0q2cwqj9cwql5"; depends=[deldir maptools raster rgdal rgeos sp spdep]; }; standardize = derive2 { name="standardize"; version="0.2.1"; sha256="0ijyqy09fl478cvqnqwv7fpdmf2yvihw18abkkmgwdnm2v3xqphp"; depends=[lme4 MASS stringr]; }; - stapler = derive2 { name="stapler"; version="0.6.3"; sha256="003khr7kg4mzk7s64m29snybkfr9z717nar7905w0q7vm8z6c06x"; depends=[matrixStats RNifti]; }; - stargazer = derive2 { name="stargazer"; version="5.2"; sha256="0nikfkzjr44piv8hng5ak4f8d7q78f2znw2df0gy223kis8q2hsd"; depends=[]; }; + stapler = derive2 { name="stapler"; version="0.6.5"; sha256="0xhwlm3iyxxmaaf0smj8g5zdawb51d7dc636czbvk5g551g7wfdb"; depends=[matrixStats RNifti]; }; + stargazer = derive2 { name="stargazer"; version="5.2.1"; sha256="1nfmb8qka6qxhjagk1a9am43dgnp39fy4cjbygivzp2hlzy22f46"; depends=[]; }; starma = derive2 { name="starma"; version="1.3"; sha256="07r0kyabhgbm2v39fcrw0qhxcxj9a9cb45g9chzcnn9qmvramcwx"; depends=[ggplot2 Rcpp RcppArmadillo scales]; }; starmie = derive2 { name="starmie"; version="0.1.2"; sha256="06cvl8gk78c55kcf4rd27d4gfzh2lcg7ldynvx4hclvbw7ak9zdq"; depends=[combinat data_table ggdendro ggplot2 ggrepel gridExtra iterpc label_switching MCL MCMCpack proxy purrr readr stringr tidyr]; }; startR = derive2 { name="startR"; version="0.0.1"; sha256="12y57n3yip5rz4rln41896a15zv5b4c67k164282fh1p6ww9gr3r"; depends=[abind bigmemory future]; }; - startup = derive2 { name="startup"; version="0.8.0"; sha256="09xqypignny764n9yvgqm9zy1bqc0d088m1b0lcbdgnlrrr3h4xn"; depends=[]; }; + startup = derive2 { name="startup"; version="0.9.0"; sha256="0cr3lp5aq93d8mk55nhfpszjkr4iv5ysm7jj7igj7yy3ag93snm0"; depends=[]; }; startupmsg = derive2 { name="startupmsg"; version="0.9.4"; sha256="1r9dqrfznsrj7s11m56hkzgfnw3qcgzh07pqipl007zr2av9xwqw"; depends=[]; }; statGraph = derive2 { name="statGraph"; version="0.1.0"; sha256="13wfylb92lzw08fn3p000v87abs7ij2rb82np1rkgsl8w2kica73"; depends=[igraph MASS]; }; statar = derive2 { name="statar"; version="0.6.5"; sha256="0vmdrdq6db16vfl0rb39x8yfnbdzpcrvywfgp4lss6jby3nvjwd9"; depends=[data_table dplyr ggplot2 lazyeval matrixStats rlang stringr tidyr]; }; @@ -10966,7 +11187,6 @@ in with self; { statesRcontiguous = derive2 { name="statesRcontiguous"; version="0.1.0"; sha256="0yzi6ycfj4cc4q0zzzckdz65wp9m4yx6fi7kp9nssj9pj6a8xlrp"; depends=[dplyr magrittr sf]; }; stationaRy = derive2 { name="stationaRy"; version="0.4.1"; sha256="1iyzg40vi1l4s68kh50in1p97pcb28z6n932cgrx5k1rv3api13g"; depends=[downloader dplyr leaflet lubridate plyr progress readr stringr]; }; statip = derive2 { name="statip"; version="0.1.5"; sha256="1gyn86kg96yrs9drc23xabf4s8ii32hgjla310sy6pd7c97bwqgf"; depends=[bazar dplyr]; }; - statisticalModeling = derive2 { name="statisticalModeling"; version="0.3.0"; sha256="018ap1hbv4m6y0c71f807apbb9bhr64kcfrn4w8ahhb2520l4mf8"; depends=[ggplot2 lazyeval magrittr mosaic rpart]; }; statmod = derive2 { name="statmod"; version="1.4.30"; sha256="07v4x8af60alcw6vbiwf5fp25bhra61kvxz9kqx64lszm0i1fb4x"; depends=[]; }; statnet = derive2 { name="statnet"; version="2016.9"; sha256="1j5z7awvac3sb66ma1lrc9j23m6hmzqfnqxc0znsm36h324y3y6s"; depends=[ergm ergm_count network networkDynamic sna statnet_common tergm]; }; statnet_common = derive2 { name="statnet.common"; version="4.0.0"; sha256="0yw6l5b4qv0jqlg4zyczas7m12a5pyqghs6ydxy2f6v6vxkijvi0"; depends=[]; }; @@ -10982,7 +11202,7 @@ in with self; { steepness = derive2 { name="steepness"; version="0.2-2"; sha256="0bw7wm7n2xspkmj90qsjfssnig683s3qwg1ndkq2aw3f6clh4ilm"; depends=[]; }; stellaR = derive2 { name="stellaR"; version="0.3-3"; sha256="098sz6b8pl3fyca3g6myp97nna368xhxf8krmibadnnsr49q5zs9"; depends=[]; }; stepPenal = derive2 { name="stepPenal"; version="0.1"; sha256="09viapb4846g91jzf9364rdyd865b19v83pwcdm3p3xsjry9ffxk"; depends=[caret dfoptim glmnet mvtnorm pROC]; }; - stepPlr = derive2 { name="stepPlr"; version="0.92"; sha256="16j32sk7ri4jdgss7vw5zz7s42rxk7rs376iyxzzpy1zcc9b64rv"; depends=[]; }; + stepPlr = derive2 { name="stepPlr"; version="0.93"; sha256="1i54nyz8z5vq3mzfh6h2vd1q0hsdazc4mhrj9ad0zdvn0qnz61lv"; depends=[]; }; stepR = derive2 { name="stepR"; version="2.0-1"; sha256="1r45wxw9kvzyybkl4f1r9c2d7wmi0k4ji39w3nxqrf7n5kp2cnj4"; depends=[digest R_cache Rcpp]; }; stepp = derive2 { name="stepp"; version="3.0-11"; sha256="0jrwfvcgh3sjm3zag93kjyny2qqsyiw988vnx6jw7s31bv9g0d6s"; depends=[car survival]; }; stepwise = derive2 { name="stepwise"; version="0.3"; sha256="1lbx1bxwkf9dw6q46w40pp7h5nkxgghmx8rkpaymm6iybc7gyir2"; depends=[]; }; @@ -10991,8 +11211,7 @@ in with self; { stilt = derive2 { name="stilt"; version="1.2.0"; sha256="1b9z64g1v5764h3y75xk1zkcv3imskvd44nqjp5m2dzmsw33nzji"; depends=[fields]; }; stinepack = derive2 { name="stinepack"; version="1.3"; sha256="0kjpcjqkwndqs7cyc6w62z1nnkqmhkifz2w0bi341jh0ybmak4fq"; depends=[]; }; stlplus = derive2 { name="stlplus"; version="0.5.1"; sha256="14728xsm982z9sg4rbqg307pbwqlsiyzj8z3sr9wr6fi0dayf6z5"; depends=[lattice Rcpp yaImpute]; }; - stm = derive2 { name="stm"; version="1.3.0"; sha256="07q8kgw46rhj2lgfcxjz2z7b65z1syh5q94lfzp3zqd7lcbfp5yy"; depends=[data_table glmnet lda Matrix matrixStats quadprog quanteda Rcpp RcppArmadillo slam stringr]; }; - stmBrowser = derive2 { name="stmBrowser"; version="1.0"; sha256="0jfh0c835a2sxn2cqlmwdlzj2g2dmkfl2z3pkv4fc1ajggw2n7g2"; depends=[httr jsonlite rjson stm]; }; + stm = derive2 { name="stm"; version="1.3.3"; sha256="1b1i4r161i92f5q63zjfghzg39bw9d2rqdxx0y6zjd8n2p0ni3wv"; depends=[data_table glmnet lda Matrix matrixStats quadprog quanteda Rcpp RcppArmadillo slam stringr]; }; stmCorrViz = derive2 { name="stmCorrViz"; version="1.3"; sha256="1a4pckrbzsihyf1bqvw3cl0hxrc4yq1pnkgxgf4b8jday6zkxwcv"; depends=[jsonlite SnowballC stm tm]; }; stmgp = derive2 { name="stmgp"; version="1.0"; sha256="1v6ahg4icyrz8p0lfiyi2x90allhjvcq8rycinas5mffg7xgpv7d"; depends=[MASS]; }; stmgui = derive2 { name="stmgui"; version="0.1.6"; sha256="1fn2m5l7y3p1riw39g6r3hpjxdccygih7yipp7dvc4msl9fm4h5c"; depends=[markdown shiny shinyBS shinyjs shinythemes stm tm]; }; @@ -11002,14 +11221,16 @@ in with self; { stochvol = derive2 { name="stochvol"; version="1.3.3"; sha256="0cg61djjfw4jmq71g8kddrihdy9n2vlpzlf7kl2f3p8njc1f8kk2"; depends=[coda Rcpp RcppArmadillo]; }; stocks = derive2 { name="stocks"; version="1.1.1"; sha256="1qwd16bw40w2ns7b0n9wm8l344r4vyk27rmg0vr5512zsrcjkcfb"; depends=[rbenchmark Rcpp]; }; stoichcalc = derive2 { name="stoichcalc"; version="1.1-3"; sha256="0z9fnapibfp070jxg27k74fdxpgszl07xiqfj448dkydpg8ydkrb"; depends=[]; }; - stopwords = derive2 { name="stopwords"; version="0.1.0"; sha256="15y0wak2gys78zd73p0chzqfx3zh2i9x4nff95apvrmrh2cfav8a"; depends=[]; }; + stopwords = derive2 { name="stopwords"; version="0.9.0"; sha256="050v3hq1wd3w83zrp76nv6n67qsf5fss2cbihb6waijancm7zfzh"; depends=[ISOcodes]; }; stormwindmodel = derive2 { name="stormwindmodel"; version="0.1.0"; sha256="1pxkb0ijx04c4bk6szxhj8lxq6x76m8pyhxpf8xq63h4gh57fxh3"; depends=[dplyr ggplot2 lubridate maps plyr stringr tidyr weathermetrics]; }; - storr = derive2 { name="storr"; version="1.1.2"; sha256="1bv5qriqh1w8rishwxkm9xzz30ildrpcvnh4g3d8khh5r8dlz5lg"; depends=[digest R6]; }; + storr = derive2 { name="storr"; version="1.1.3"; sha256="0rmljnlnbi5jdxbh5mzxgkq9aa3mm46kl04jlasyng8pv3prxj1v"; depends=[digest R6]; }; stosim = derive2 { name="stosim"; version="0.0.12"; sha256="0c4sj5iirm542hx782izfdmy2m3kl5q28l10xjj0ib4xn5y6yx3c"; depends=[Rcpp tcltk2]; }; - stplanr = derive2 { name="stplanr"; version="0.2.1"; sha256="0bf5k6irq1gwxk5vdl68bii1f8qd2gprzl8vmbnk98lccmvwna8d"; depends=[curl dplyr geosphere httr igraph jsonlite lubridate maptools nabor openxlsx R_utils raster Rcpp RcppArmadillo readr rgdal rgeos rlang sf sp stringi stringr]; }; + stplanr = derive2 { name="stplanr"; version="0.2.2"; sha256="1yl2x73y39d4405qis22bhqb1afiwdra8h034k6y2jjgwi3l34yy"; depends=[curl dplyr geosphere httr igraph jsonlite lubridate maptools nabor openxlsx R_utils raster Rcpp RcppArmadillo readr rgdal rgeos rlang sf sp stringi stringr]; }; stpm = derive2 { name="stpm"; version="1.6.8"; sha256="0gifkrpp8n4r31i4dfvjfq7w0l6jfid43i94ygqwwv0ca583aw4y"; depends=[mice nloptr Rcpp RcppArmadillo sas7bdat survival]; }; - stpp = derive2 { name="stpp"; version="2.0-1"; sha256="0a4qpby9z8jcm3z7xcw71h4avqchjr867dwx1c0198hpjz8bm5kp"; depends=[ggplot2 gridExtra KernSmooth plot3D rgl rpanel spatstat splancs]; }; + stpp = derive2 { name="stpp"; version="2.0-3"; sha256="18icnfrlrcibrpw7vqkrhzfx880ak24xk6llwgiqw18r929mq1hw"; depends=[ggplot2 gridExtra KernSmooth plot3D rgl rpanel spatstat splancs]; }; stppResid = derive2 { name="stppResid"; version="1.1"; sha256="0hgzsyy5y0sqd4d2agdr7p2kq0w51vs8f63dvj6j49h8cvgiws2x"; depends=[cubature deldir splancs]; }; + strandCet = derive2 { name="strandCet"; version="1.0"; sha256="019cacj0g9f6i8v03rq7qyph7f14d8n0qw0axvczijvnk99q602a"; depends=[boot corpcor MASS minpack_lm mvtnorm numDeriv]; }; + stranger = derive2 { name="stranger"; version="0.3.2"; sha256="05s4dv9w8dxy2x63ai8vyh3rwphr4h59axjsh7lqa05ja06pai5z"; depends=[assertthat data_table dplyr ggplot2 tidyr]; }; strap = derive2 { name="strap"; version="1.4"; sha256="0gdvx02w0dv1cq9bb2yvap00lsssklfnqw0mwsgblcy2j6fln7b0"; depends=[ape geoscale]; }; strat = derive2 { name="strat"; version="0.1"; sha256="1axxrp750kjzcgxjdqfscjmryv1mkv4l23zk8k23z8l4ymhd2f5w"; depends=[Hmisc Rcpp RcppArmadillo]; }; strataG = derive2 { name="strataG"; version="2.0.2"; sha256="1rf1xf07yb0dzasgig9sfm4i9ggdkjgy5iiysqgdapk3sxs26c8r"; depends=[adegenet ape apex copula data_table DT ggplot2 gridExtra Hmisc pegas phangorn RColorBrewer Rcpp shiny shinyFiles survival swfscMisc]; }; @@ -11019,20 +11240,20 @@ in with self; { stratvns = derive2 { name="stratvns"; version="1.0"; sha256="1bw9l389lxiji4h7hrsshf24v135h6la9dg3xxjly53d4fi56ifh"; depends=[MultAlloc Rglpk sampling snowfall stratification]; }; straweib = derive2 { name="straweib"; version="1.0"; sha256="0bh2f4n4i7fiki52sa57v96757qw1gn1lcn7vgxmc5hk5rzp2mi8"; depends=[]; }; stream = derive2 { name="stream"; version="1.2-4"; sha256="1xk9lnvf9xld74z4sxbwpgxl7cbni88cjyxqzxr0r9pn9vcpwima"; depends=[animation clue cluster clusterGeneration dbscan fpc MASS mlbench proxy Rcpp]; }; - streamMOA = derive2 { name="streamMOA"; version="1.1-2"; sha256="0mg113v8zy6kh67hm91xfd9kd1x8vvvx03svhz70nz9npw00pvlz"; depends=[rJava stream]; }; + streamMOA = derive2 { name="streamMOA"; version="1.1-3"; sha256="0vgnd27xl7lgir0ps3zsz7ca2vvjg8yp28zbfvdgvm3agk7dpra7"; depends=[rJava stream]; }; streamR = derive2 { name="streamR"; version="0.2.1"; sha256="1ml33mj7zqlzfyyam23xk5d25jkm3qr7rfj2kc5j5vgsih6kr0gl"; depends=[RCurl rjson]; }; + streambugs = derive2 { name="streambugs"; version="1.0"; sha256="1dyh5rwi47dn584nyy7f7vg5j5nlpz7ygcl8lwkj7prahplmzg5d"; depends=[deSolve]; }; stremr = derive2 { name="stremr"; version="0.4"; sha256="0n8ickmzjqlxwrz8dsphh1nsbnsgp4mnwm52i5ji099ps5292f65"; depends=[assertthat data_table pander R6 Rcpp rmarkdown speedglm stringr zoo]; }; stressr = derive2 { name="stressr"; version="1.0.0"; sha256="00b93gfh1jd5r7i3dhsfqjidrczf693kyqlsa1krdndg8f0jkyj7"; depends=[lattice latticeExtra XML xts]; }; - strider = derive2 { name="strider"; version="1.0"; sha256="0qr2zgcnrxqmjqxxgd0kwby9ws8zhaw7iwdsspn1yznanr2g6b51"; depends=[BH Rcpp]; }; + strider = derive2 { name="strider"; version="1.1"; sha256="00r6gbvwmla5h27iyi7rdfd0kr4alxz19fd7g2ba0in3779za3sw"; depends=[BH Rcpp]; }; stringb = derive2 { name="stringb"; version="0.1.13"; sha256="004bp75yhrgr480v9774kfq7z5l9z0761cnrwj4yk7fxygk89a1x"; depends=[backports]; }; stringdist = derive2 { name="stringdist"; version="0.9.4.6"; sha256="0j5b7hr53nr9xq44famkpwzi4khix93ffani5pwldqkf8bpdvhci"; depends=[]; }; - stringformattr = derive2 { name="stringformattr"; version="0.1.1"; sha256="16kkmb933v8pzc4gwz4x2nm51sj82slwpxmmn6p6p8dq5nfzmx5q"; depends=[stringr]; }; - stringgaussnet = derive2 { name="stringgaussnet"; version="1.1"; sha256="161fi78cd7yddbcq71z3fgx1q2sacg1n1ggrkrqz17icwzviqrh5"; depends=[AnnotationDbi biomaRt GO_db httr igraph limma org_Hs_eg_db pspearman RCurl RJSONIO simone VennDiagram]; }; + stringformattr = derive2 { name="stringformattr"; version="0.1.2"; sha256="0x56k30clj5ajk0qg5sr8b9l0asz6ldivwr1ddy1vp1djliih1fx"; depends=[stringr]; }; stringi = derive2 { name="stringi"; version="1.1.6"; sha256="122im5m8x9bqpahc0hbxmvdq6hnsmgnxwwyjpvbihyv2jq5kd44m"; depends=[]; }; - stringr = derive2 { name="stringr"; version="1.2.0"; sha256="16hj2rmv8x03lp6cp2jk0k2plibvbggf444kp05przdvd03v7l31"; depends=[magrittr stringi]; }; + stringr = derive2 { name="stringr"; version="1.3.0"; sha256="07dvfbkhv8gk6l32j43jvxpmqlhqp0mdby406h5a3bsc6k94ic13"; depends=[glue magrittr stringi]; }; strip = derive2 { name="strip"; version="0.1.1"; sha256="18pz6ix6d661fvg1k1yyyiiwa1gdixynmpxl725ffd9lpykmfqbw"; depends=[rlist]; }; stripless = derive2 { name="stripless"; version="1.0-3"; sha256="08mdp7kq6r5bk77j09477d1dnn7iwa346pr24b5bqsxwnbknyrsr"; depends=[lattice]; }; - striprtf = derive2 { name="striprtf"; version="0.4.5"; sha256="002whpmzhqw8bhqbdilfmlz0q4hgh9yy4ad1kly6lngx2n3p7db0"; depends=[magrittr Rcpp stringr]; }; + striprtf = derive2 { name="striprtf"; version="0.5.1"; sha256="1pv67grm8fb1plsfxrfrmv0yk6cjnf44ssawddlcxy9mvg3ka5mm"; depends=[magrittr Rcpp stringr]; }; strucchange = derive2 { name="strucchange"; version="1.5-1"; sha256="0cdgvl6kphm2i59bmnppn1y3kv65ml111bk7yzpcx7vv8wh2w3kl"; depends=[sandwich zoo]; }; structSSI = derive2 { name="structSSI"; version="1.1.1"; sha256="06rwmrgqc4qy4x0bhlshjdsjxfmp5fr9d1wjglhlb1gbp72fmkdv"; depends=[ggplot2 igraph multtest reshape2 rjson]; }; structree = derive2 { name="structree"; version="1.1.5"; sha256="0m14jzhmkfn8dpxjzj8xh9zf6cggqj3awnfz7zh1xlkkka91jz8d"; depends=[lme4 mgcv penalized]; }; @@ -11040,7 +11261,8 @@ in with self; { strvalidator = derive2 { name="strvalidator"; version="2.0.0"; sha256="03f7clhs1hda3lkard7lbx4pfyqvhwm35r3d9sz2yksp5s78wbjk"; depends=[data_table ggplot2 gridExtra gtable gWidgets2 gWidgets2RGtk2 MASS plyr RGtk2 scales]; }; stsm = derive2 { name="stsm"; version="1.9"; sha256="18ypmkd7l7m7qkahb0nqf8f1m8g4irxlw48v2ms0dq1bsnhbzx7j"; depends=[KFKSDS]; }; stsm_class = derive2 { name="stsm.class"; version="1.3"; sha256="19jrja5ff31gh5k2zqhqsyd7w2ivr4s6bkliash6x8fmd22h5zs8"; depends=[]; }; - stubthat = derive2 { name="stubthat"; version="1.2.0"; sha256="0ib1jvrhxahlpaqai0zg49jr2iwn04c0iimfgvhvx3hyp9qhhbll"; depends=[testthat]; }; + stubthat = derive2 { name="stubthat"; version="1.2.1"; sha256="130naxzvswcyadwcgldvwnxxdxbfwx5vljac7901vn3ahjp75d8z"; depends=[testthat]; }; + styler = derive2 { name="styler"; version="1.0.0"; sha256="03wpxq3gxfid96n1q8rgpz4sfl4y2j7g7dbjvjxgj1nalsg9lav7"; depends=[backports cli enc magrittr purrr rematch2 rlang rprojroot tibble withr]; }; stylo = derive2 { name="stylo"; version="0.6.5"; sha256="15y7iwk1w9kkdhpbgbvi1cqzza4jgw8zxsp3xbqzhm4qaf4kymia"; depends=[ape class e1071 lattice pamr tcltk2 tsne]; }; suRtex = derive2 { name="suRtex"; version="0.9"; sha256="0xcy3x1079v10bn3n3y6lxignb9n3h57w4hhrvzi5y14x05jjyda"; depends=[]; }; subcopem2D = derive2 { name="subcopem2D"; version="1.2"; sha256="1yrjqg3y6i5m6k0zljq1p1pciicmc1vig3qd0wxaicz708rbp3yq"; depends=[]; }; @@ -11048,14 +11270,15 @@ in with self; { subgroup = derive2 { name="subgroup"; version="1.1"; sha256="1n3qw7vih1rngmp4fwjbs050ngby840frj28i8x7d7aa52ha2syf"; depends=[]; }; subgroup_discovery = derive2 { name="subgroup.discovery"; version="0.2.0"; sha256="17z49l26sfly3fln2z1x9vd6a6rsxn65z9lcb8kjylngm5s63rqj"; depends=[]; }; sublime = derive2 { name="sublime"; version="1.3"; sha256="0455fppc68azxknxjvxci4kjpcj6c1jkp9adbxqrn3qnnywaj5v2"; depends=[AnalyzeFMRI downloader oro_nifti]; }; + submax = derive2 { name="submax"; version="1.1.1"; sha256="0b9x55gqzw20smr3hx9izvyr0i8zv0h03hadn4c7ks7w8ga5i0kj"; depends=[mvtnorm sensitivityfull]; }; subniche = derive2 { name="subniche"; version="0.9.7"; sha256="1jsdcaf6d38j7c0ppjyilj0jd2dbpdldw6w4prmsbmx8mh7lplww"; depends=[ade4]; }; - subplex = derive2 { name="subplex"; version="1.4-1"; sha256="1imfdiw8r7kb2i0ir7z69cwz2ai7a3nr248m4pqacad2m9hvkdwl"; depends=[]; }; + subplex = derive2 { name="subplex"; version="1.5-2"; sha256="1v9xrnkapnq7v1jbhlg32ignklzf2vn8rqpayc8pzk8wvz53r33g"; depends=[]; }; subprocess = derive2 { name="subprocess"; version="0.8.2"; sha256="1qyl8726vq94vqd6iyh9kca6wwxi3g7yv4b784wn2ifrm4waixxd"; depends=[]; }; subrank = derive2 { name="subrank"; version="0.9.9"; sha256="1z6sp9rfmpy28gpw13bh0c7y98lbbgv1cciavg3gix01whqa49n3"; depends=[]; }; subsamp = derive2 { name="subsamp"; version="0.1.0"; sha256="1bfz2z2qy1war3id8qr1asygwvwxgf2hhlh075hr6bjdkxz0j0nd"; depends=[]; }; subscore = derive2 { name="subscore"; version="2.0"; sha256="1vscmzw6ama2kc7ic6b2rfbbczcpyhp0m4dd5khg9vkyihww5b5h"; depends=[CTT irtoys]; }; subscreen = derive2 { name="subscreen"; version="0.2.2"; sha256="08s8ys0ban80xbyfzjimbgld4622c5bn0qwjmsa7g0dn5ss3ccq9"; depends=[data_table plyr]; }; - subselect = derive2 { name="subselect"; version="0.13"; sha256="1zvvh6xcvbb05hxmyjwg80j2zhmqrlsjbj396k5s0kazkyvrwdyg"; depends=[corpcor ISwR MASS]; }; + subselect = derive2 { name="subselect"; version="0.14"; sha256="03sfnpj219a0ma92c2z953bh2y6s7w2c84lf2shnghmmxmg7jq9l"; depends=[corpcor ISwR MASS]; }; subsemble = derive2 { name="subsemble"; version="0.0.9"; sha256="0vzjmxpdwagqb9p2r4f2xyghmrprx3nk58bd6zfskdgj0ymfgz5z"; depends=[SuperLearner]; }; subspace = derive2 { name="subspace"; version="1.0.4"; sha256="0p2j0lnwj3ym1v4xla6r97zjikb8alnibdc690xn9c0z21hmv43v"; depends=[colorspace ggvis rJava stringr]; }; subspaceMOA = derive2 { name="subspaceMOA"; version="0.6.0"; sha256="1q2n4q87zaxwaak77b6rff97n9sx6nflshqf73r2q8hflfs3sxv3"; depends=[fields ggplot2 gridExtra magrittr rJava shiny stream streamMOA]; }; @@ -11063,9 +11286,10 @@ in with self; { sudoku = derive2 { name="sudoku"; version="2.6"; sha256="13j7m06m38s654wn75kbbrin5nqda4faiawlsharxgrljcibcbrk"; depends=[]; }; sudokuAlt = derive2 { name="sudokuAlt"; version="0.1-11"; sha256="1hv9d99ir1xz6p0arxr77dv5qb45sr8jhapm6wf755l7pxlqqklq"; depends=[magrittr]; }; sugrrants = derive2 { name="sugrrants"; version="0.1.1"; sha256="08f5xdgimdvpivzrlwvdyrmy21nbh379pgfdrx4lxqcxd55y2hil"; depends=[dplyr ggplot2 lubridate purrr readr rlang tidyr timeDate]; }; + sumFREGAT = derive2 { name="sumFREGAT"; version="1.0.0"; sha256="13g3px3c3dxacrvgwrvqdp8lm7k185npr0dlq3siq9x9mgjr7hsj"; depends=[Matrix]; }; summariser = derive2 { name="summariser"; version="0.1.0"; sha256="0a6wyb0r1i0cynld002q96ylr58jz76n5jqjz8gm6a3csjn9qss7"; depends=[dplyr ggplot2 lazyeval plotrix]; }; - summarytools = derive2 { name="summarytools"; version="0.6.5"; sha256="1ddvwn0rfyrlfar1kpwggxnpp9dpswdy8v5alcv3kanp540hnmb1"; depends=[Hmisc htmltools matrixStats pander pryr rapportools rstudioapi xtable]; }; - sunburstR = derive2 { name="sunburstR"; version="1.0.2"; sha256="16z2c6xaf1mss5qygwpacn1slqzlkb502d1rw40m48v5akfg93sx"; depends=[d3r dplyr htmltools htmlwidgets]; }; + summarytools = derive2 { name="summarytools"; version="0.8.2"; sha256="014hxyk0r87j5prqdckxy7h41agk2p1w1kxzl0a3pxwbj1j0r2fh"; depends=[htmltools matrixStats pander pryr rapportools RCurl]; }; + sunburstR = derive2 { name="sunburstR"; version="1.0.3"; sha256="0xxxi01klrm7kspi588n4h5zdzhph5vihs26n2x8fdm2k82jyjp9"; depends=[d3r dplyr htmltools htmlwidgets]; }; suncalc = derive2 { name="suncalc"; version="0.3"; sha256="1x7k4rpl6f1arq4z76zfx3nv0d0b4x3q6sk0jz5d4azq0i364nx9"; depends=[V8]; }; supc = derive2 { name="supc"; version="0.1"; sha256="1cq0lr04m409xr3i1hphww4ldr8z3kqq2gmp7hm3yp0iz2gy3m9a"; depends=[BH Rcpp]; }; supclust = derive2 { name="supclust"; version="1.0-7"; sha256="0437pccagvqv6ikdsgzpif9yyiv6p24lhn5frk6yqby2asj09727"; depends=[class rpart]; }; @@ -11076,7 +11300,7 @@ in with self; { superheat = derive2 { name="superheat"; version="0.1.0"; sha256="01v8s6px1k5fajlm6py3ksr1i853kwwlky1yryzhy3p1cxhwgg83"; depends=[dplyr ggdendro ggplot2 gtable magrittr plyr scales]; }; superpc = derive2 { name="superpc"; version="1.09"; sha256="1p3xlg2n7p57n54g2w4frfrng5vjh97kp6ax4mrgvj3pqmd1m69z"; depends=[survival]; }; supervisedPRIM = derive2 { name="supervisedPRIM"; version="2.0.0"; sha256="1j5gsy119pvrhkkg048lyk6hjvn9x1bhmfy5g824gj3k1w5slrib"; depends=[prim]; }; - support_BWS = derive2 { name="support.BWS"; version="0.1-4"; sha256="1zg0wgqhcnk3sx87k3l9z4zf3ck3gk75rn37am1rq6wbzbfm96i4"; depends=[]; }; + support_BWS = derive2 { name="support.BWS"; version="0.2-0"; sha256="1yfjpr9v9zsbkysm3r6zk9r0a072g038lmj9wk4014a3rk9kmm80"; depends=[]; }; support_BWS2 = derive2 { name="support.BWS2"; version="0.1-1"; sha256="1jay1ak8242vn9a0ippfdd48vdxqqz9j8frbgf5ncffdmzzn1n21"; depends=[]; }; support_CEs = derive2 { name="support.CEs"; version="0.4-1"; sha256="1rbyl7v6m07dsp08kkk9020bh39rhx89q7d05rc5kxb6f7y66jyz"; depends=[DoE_base MASS RCurl simex XML]; }; supportInt = derive2 { name="supportInt"; version="1.1"; sha256="14fh75sds05c06xkcfbijd8my3sa9kpnczzh96xx0gwj1193yya9"; depends=[ProfileLikelihood]; }; @@ -11097,9 +11321,9 @@ in with self; { survPresmooth = derive2 { name="survPresmooth"; version="1.1-10"; sha256="0m1037v857g140lypck5zq2zf52rkdxzaqlj9kjn7h7lp6gif6ia"; depends=[]; }; survRM2 = derive2 { name="survRM2"; version="1.0-2"; sha256="0pvp65c1kkbkcci4l3cvq4a5krmv58jwb9abz5225ql6jyawzlsw"; depends=[survival]; }; survSNP = derive2 { name="survSNP"; version="0.24"; sha256="0mzwcp8zfqvsiapa446si9qb6wyymnw5zj6acj6f2cfjpyi76k4w"; depends=[foreach lattice Rcpp survival xtable]; }; - surveillance = derive2 { name="surveillance"; version="1.15.0"; sha256="1s8gh0n0k7z1hd2l5rbqv9jbma9zgfsavkgfp148wzp67cyj5lkx"; depends=[MASS Matrix nlme polyCub Rcpp sp spatstat xtable]; }; + surveillance = derive2 { name="surveillance"; version="1.16.0"; sha256="1nbskhbs8qfwnchig4rckbgy296ifl1hx0w3v71knj693x54r9cj"; depends=[MASS Matrix nlme polyCub Rcpp sp spatstat xtable]; }; survexp_fr = derive2 { name="survexp.fr"; version="1.0"; sha256="12rjpnih0xld4dg5gl7gwxdxmrdmyzsymm7j05v98ynldd1jkjl8"; depends=[survival]; }; - survey = derive2 { name="survey"; version="3.32-1"; sha256="0law5dw2kprbkclrq0xj5vy6qcbx4i0rmasmsawyl35q4y1v01ny"; depends=[lattice Matrix survival]; }; + survey = derive2 { name="survey"; version="3.33"; sha256="11pmk26hirq5p7p4131crpb175hvgg4id5y5m14rskpx8nbp9l94"; depends=[lattice Matrix survival]; }; surveybootstrap = derive2 { name="surveybootstrap"; version="0.0.1"; sha256="13rp6gj1dgdzcjbi2403pldygp1dyqx8zj0r1nvyghpi06x5gpb7"; depends=[dplyr functional plyr Rcpp RcppArmadillo stringr]; }; surveydata = derive2 { name="surveydata"; version="0.2.0"; sha256="1iwhjhazfy38dbcj224kz3zbw2nvpq01ry54wmmkg9d0n6mb02h4"; depends=[dplyr magrittr plyr purrr stringr]; }; surveyeditor = derive2 { name="surveyeditor"; version="1.0"; sha256="073219bcn1hlxl9ql6gncfvgn0m37pz5sb7h94nq6lf35dymq5zq"; depends=[]; }; @@ -11108,14 +11332,13 @@ in with self; { survidm = derive2 { name="survidm"; version="1.0.0"; sha256="13iwl687g4qps6s3d8x0xr916b2ja6487dwnyqwc3nwr6gadqicw"; depends=[doParallel doRNG foreach KernSmooth np survival TPmsm]; }; survivALL = derive2 { name="survivALL"; version="0.9.1"; sha256="0l32p64a1izsrcplx09wlisca3daysl5cx2vhh4k08sxizyg90c1"; depends=[Biobase broom cowplot data_table desiR ggplot2 ggthemes magrittr pander png readr survcomp survival survsim testthat viridis]; }; survival = derive2 { name="survival"; version="2.41-3"; sha256="07cnr0hnki6ybbjll54l4s5lllhk19vni5f8m0mvsfp99ls7qygk"; depends=[Matrix]; }; - survivalMPL = derive2 { name="survivalMPL"; version="0.1.2"; sha256="19gp57c1cwcfvpvz5bxvcrg7l1nbdr1i42c80q51pyacq51ahxs5"; depends=[survival]; }; + survivalMPL = derive2 { name="survivalMPL"; version="0.2"; sha256="05bfa9fx841kh9g2jcs1dimsxkjnf4bxgamcnjpisx3a644c1gkn"; depends=[MASS survival]; }; survivalROC = derive2 { name="survivalROC"; version="1.0.3"; sha256="0wnd65ff5w679hxa1zrpfrx9qg47q21pjxppsga6m3h4iq1yfj8l"; depends=[]; }; - survivalsvm = derive2 { name="survivalsvm"; version="0.0.3"; sha256="10a5qjhwbk41g33aa2rsgp86l8pks5bmn83z3906q39yk0x7xqrv"; depends=[Hmisc kernlab Matrix pracma quadprog survival]; }; - survminer = derive2 { name="survminer"; version="0.4.1"; sha256="1ma1ajn2z57zfqdx5w330wagl3hrzzzj25fjpzrk8bkrcb4bxss9"; depends=[broom cmprsk dplyr ggplot2 ggpubr gridExtra magrittr maxstat purrr scales survival survMisc tibble tidyr]; }; - survrec = derive2 { name="survrec"; version="1.2-2"; sha256="0b77ncr1wg2xqqg1bv1bvb48kmd9h3ja2dysiggvprzjrj7hdlmx"; depends=[boot]; }; + survivalsvm = derive2 { name="survivalsvm"; version="0.0.5"; sha256="1b4hrdrqq1z0kfn8vpdwg54388m25df2s6w9i574x3mkxkmkjkga"; depends=[Hmisc kernlab Matrix pracma quadprog survival]; }; + survminer = derive2 { name="survminer"; version="0.4.2"; sha256="15npx3q7xf7sl7pbb1476khgfpqrvidqcb101iim3iym125sl54r"; depends=[broom cmprsk dplyr ggplot2 ggpubr gridExtra magrittr maxstat purrr scales survival survMisc tibble tidyr]; }; survsim = derive2 { name="survsim"; version="1.1.4"; sha256="16njbqlzmk34zrh485kc0a52yacdyj9z4z4a9zcq1z5psm87c58m"; depends=[eha statmod]; }; survtmle = derive2 { name="survtmle"; version="1.0.0"; sha256="1sdp88br1ry6yzzav67787n0clpq6vjffxqpkvld93dyvmlb6zb1"; depends=[ggplot2 Matrix plyr stringr SuperLearner tidyr]; }; - survutils = derive2 { name="survutils"; version="1.0.0"; sha256="1dha1i2k9dyc9m9awqiq2ypy617zmw9yflfzv182z5fpd491ghrv"; depends=[broom dplyr ggplot2 lazyeval magrittr purrr survC1 survival]; }; + survutils = derive2 { name="survutils"; version="1.0.1"; sha256="09844i5nfyn0fm5i8ca96xz8dza21shh2f89w41zh17xaxvidjsw"; depends=[broom dplyr ggplot2 glue lazyeval magrittr purrr survC1 survival]; }; sutteForecastR = derive2 { name="sutteForecastR"; version="0.1"; sha256="13dd0v3l3s7xb1wnpf6qvnvclzab87831z8bsxsq53vpb26xcw1b"; depends=[forecast forecastHybrid fracdiff robets]; }; svDialogs = derive2 { name="svDialogs"; version="0.9-57"; sha256="1qwnimzqz7jam3jnhpr90bgwp9zlsswy2jl17brdpsrpiwcg6jlr"; depends=[svGUI]; }; svDialogstcltk = derive2 { name="svDialogstcltk"; version="0.9-4"; sha256="16166f8i6nsg7palqmnlp5b9s91d6ja9n0zm6rcvd2fwnw2ljkr4"; depends=[svDialogs svGUI]; }; @@ -11123,36 +11346,37 @@ in with self; { svHttp = derive2 { name="svHttp"; version="0.9-55"; sha256="0qxsh6ifk3fszgzz497qwia4pxzplwraf2qnn5cqlv5l79nja5yq"; depends=[svMisc]; }; svIDE = derive2 { name="svIDE"; version="0.9-52"; sha256="19wsmi1i7nlnqdah1h2pxzsy8m50bnb282fdbj4219p86bb92a86"; depends=[svMisc XML]; }; svKomodo = derive2 { name="svKomodo"; version="0.9-63"; sha256="0x2774lhckhg8kw6plsn6dpks3b3fisb0psa03p7di7jx8vrkg5n"; depends=[svMisc]; }; - svMisc = derive2 { name="svMisc"; version="0.9-70"; sha256="1xprymz5hblbc929kmbaz0lj633xvgz6mm4snhhjib47cz5anl1w"; depends=[]; }; + svMisc = derive2 { name="svMisc"; version="1.0-1"; sha256="17prhh92zbibkkdqyqdg8bp4fvsmj6ziaii3fxq3z0vnl6gj9p86"; depends=[]; }; svSocket = derive2 { name="svSocket"; version="0.9-57"; sha256="0id93b500iybza6sbn60ybm91mkh5cjpvhypqs4f3dv13m6blb9j"; depends=[svMisc]; }; svSweave = derive2 { name="svSweave"; version="0.9-8"; sha256="0zkng8lwdpjdbic9f6jnk2ndxbch2kjyz71ds1bksvd3kmk03lks"; depends=[knitr]; }; svTools = derive2 { name="svTools"; version="0.9-4"; sha256="0szr5dcxjsh5p1nkszvmj0vmi9x70d656hfvhmqf0wyjwv63vp90"; depends=[codetools svMisc]; }; svUnit = derive2 { name="svUnit"; version="0.7-12"; sha256="16iiryj3v34zbnk1x05g30paza7al1frqx52fkw8ka61icizsrf5"; depends=[]; }; svWidgets = derive2 { name="svWidgets"; version="0.9-44"; sha256="18k06wldcg6xpyf8nz9rdbig5nhvghn7zgf1316413kq3v90vz7b"; depends=[svMisc]; }; svapls = derive2 { name="svapls"; version="1.4"; sha256="12gk8wrgp556phdv89jqza22zmsnachsydr5vlz38s664d2lplbg"; depends=[class pls]; }; - svars = derive2 { name="svars"; version="1.0.0"; sha256="0aa96g28yd1dymyqdr4gwlgvpb0diybwbximfjqjxicrzik69aaf"; depends=[clue copula DEoptim expm ggplot2 pbapply reshape2 steadyICA tsDyn vars]; }; + svars = derive2 { name="svars"; version="1.1.1"; sha256="1hd052xksciwqqviwr29ch8s85ci8j15c8dqrbdra803lllfkngf"; depends=[clue copula DEoptim expm ggplot2 pbapply reshape2 steadyICA tsDyn vars]; }; svcm = derive2 { name="svcm"; version="0.1.2"; sha256="1lkik65md8xdxzkmi990dvmbkc6zwkyxv8maypv2vbi2x534jkhl"; depends=[Matrix]; }; svd = derive2 { name="svd"; version="0.4.1"; sha256="00plnwrjnp3majssr3qbz2zp25z9cfivgpggyfvy4lnc4av5qn3g"; depends=[]; }; svdvis = derive2 { name="svdvis"; version="0.1"; sha256="1z3z86izl2gpxllpx56vn6kkdg9cjjikfd90hdjnfi4bmmpx50dn"; depends=[GGally ggplot2 gridExtra RColorBrewer reshape2 scales]; }; svdvisual = derive2 { name="svdvisual"; version="1.1"; sha256="02mzh2cy4jzb62fd4m1iyq499fzwar99p12pyanbdnmqlx206mc2"; depends=[lattice]; }; svenssonm = derive2 { name="svenssonm"; version="0.1.0"; sha256="0pvay9vfrcafaq270pq6glp2b74zdfgldksl13cwdb0wk7qx7731"; depends=[]; }; svgPanZoom = derive2 { name="svgPanZoom"; version="0.3.3"; sha256="09gfa2943bvmjpnhnc2nr85wddkv662k30pxsqvvvq1va64rzpkc"; depends=[htmlwidgets]; }; - svgViewR = derive2 { name="svgViewR"; version="1.2"; sha256="0h3smaplnkkvbl9c6lwl67jbk34m6sygkh2d82xz66hbyw2i6q7k"; depends=[]; }; + svgViewR = derive2 { name="svgViewR"; version="1.3"; sha256="0771k1v0aqlq8q9rvynb5dkwq0kmlsn8nh251lka98jwh36vhld0"; depends=[rjson Rook]; }; svglite = derive2 { name="svglite"; version="1.2.1"; sha256="1bws3lc4hlhln11zd7lalhiyc43yk6c6vrzy41fkxk1dkjazfx51"; depends=[BH gdtools Rcpp]; }; svmadmm = derive2 { name="svmadmm"; version="0.3"; sha256="15ccda1r9cc6v30j37i052rdwxgw0wg37hwyn2vp8c7bkr0ybgkm"; depends=[kernlab]; }; svmpath = derive2 { name="svmpath"; version="0.955"; sha256="02j5xs4gg8k16imnwk6aram168cv1dqdrky3bszyc98l7xd0nlrj"; depends=[]; }; svs = derive2 { name="svs"; version="1.1.0"; sha256="0575msaxg04ck76mbr815m29y895qvg8b9qg4y0ggv6b1lvwp5p6"; depends=[gtools]; }; svyPVpack = derive2 { name="svyPVpack"; version="0.1-1"; sha256="15k5ziy2ng853jxl66wjr27lzc90l6i5qr08q8xgcs359vn02pmp"; depends=[survey]; }; - swCRTdesign = derive2 { name="swCRTdesign"; version="2.1"; sha256="0c5pya5jgpj5ncrvpzahhrbhl7b39w19f3vl06r8q0nandbn7rwq"; depends=[]; }; + swCRTdesign = derive2 { name="swCRTdesign"; version="2.2"; sha256="0kggniy5p900cj074swh7g47zf8bhwjmqph9b5frw86nycxwyn3v"; depends=[]; }; swa = derive2 { name="swa"; version="0.8.1"; sha256="1zy1a6c17vmdkmkwp8vv3niww2zs1m0hylsa0b2cz68vfhnmpim4"; depends=[ggplot2 reshape ROCR]; }; swagger = derive2 { name="swagger"; version="3.4.0"; sha256="1590335n9l1s65li5018m0r3ss67ccgy10lnywxi2ypya71c58zs"; depends=[]; }; swamp = derive2 { name="swamp"; version="1.3.1"; sha256="1l4rk79hbggn31y5skslqsz9bv7lmya4q5ligki3x1677345hyhv"; depends=[amap gplots impute MASS]; }; swapClass = derive2 { name="swapClass"; version="1.0.1"; sha256="0wg6km261xdywakxi64dw4wwprbrkw217q4c6622z0mgm9sjgpym"; depends=[inline]; }; + swatches = derive2 { name="swatches"; version="0.5.0"; sha256="1kivscgka8gn44rjj0s5sjan1s04znnyn0nd37a74zaik0hm8zs0"; depends=[colorspace httr pack stringr xml2]; }; sweep = derive2 { name="sweep"; version="0.2.0"; sha256="11hyv48hldacdbi7avvgmrqk9andjkabdswf1blfb4qyc2z0199v"; depends=[broom devtools dplyr forecast lazyeval lubridate tibble tidyr timetk]; }; sweidnumbr = derive2 { name="sweidnumbr"; version="1.4.1"; sha256="014zbp6a66gv7b0f2gmzvifllz266zrc14ihawksvyp1mcxz2ipg"; depends=[lubridate stringr]; }; swfscMisc = derive2 { name="swfscMisc"; version="1.2"; sha256="08p2crsx8zi6qprs14mhdyq9x5sjlp3a46c1zzvp6741an4fy640"; depends=[ggplot2 mapdata maps reshape2 spatstat]; }; swirl = derive2 { name="swirl"; version="2.4.3"; sha256="1l7gwisk3sjslh6zh4cq3vxf5y84af2fr078cp4i86rw1w2j9d44"; depends=[digest httr RCurl stringr testthat yaml]; }; - swirlify = derive2 { name="swirlify"; version="0.5.1"; sha256="1hj0y4qrzwr41gk79mxzgawincw0v86bc5735i6kbl0khz1i76z1"; depends=[base64enc readr rmarkdown shiny shinyAce stringr swirl whisker yaml]; }; + swirlify = derive2 { name="swirlify"; version="0.5.2"; sha256="07r6rdj079ryafdgs0p8jhnk4h7iqm7agh9wjhvm12abbwjr9g1x"; depends=[base64enc readr rmarkdown shiny shinyAce stringr swirl whisker yaml]; }; switchnpreg = derive2 { name="switchnpreg"; version="0.8-0"; sha256="1vaanz01vd62ds2g2xv4kjlnvp13h59n8yqikwx07293ixd4qhpw"; depends=[expm fda HiddenMarkov MASS]; }; switchr = derive2 { name="switchr"; version="0.12.6"; sha256="0i5xcjhjnqk3qbmc8kr7q8khrjvqdp7yy8yydkz6pmjgzwkyw9hs"; depends=[RCurl RJSONIO]; }; switchrGist = derive2 { name="switchrGist"; version="0.2.2"; sha256="1mzlwnldapzmykfmz51dwr258iizmrrzi5bj84gdjbbg80r3s5ds"; depends=[gistr httpuv RJSONIO switchr]; }; @@ -11165,26 +11389,26 @@ in with self; { sybilcycleFreeFlux = derive2 { name="sybilcycleFreeFlux"; version="2.0.0"; sha256="0p3w7ipyrqrh7nf52h8qmr4fikyinm8an7npmcb7kwjd59rcy554"; depends=[MASS Matrix sybil]; }; sylcount = derive2 { name="sylcount"; version="0.1-0"; sha256="1dxbqbjyvkg7cx234icby9fjdjz1z4l4crqd7kv8m05fv69pg224"; depends=[]; }; syllable = derive2 { name="syllable"; version="0.1.3"; sha256="1ymnczwx58h720hsm0s9zq3ddwg6gn6bgg0m8zw24i0nlivx0yjg"; depends=[data_table stringi textclean textshape]; }; - sylly = derive2 { name="sylly"; version="0.1-3"; sha256="1zd3gwyzxnym232324zrn0696l47fmgvr2fdv91ssgr42pchsj60"; depends=[]; }; + sylly = derive2 { name="sylly"; version="0.1-4"; sha256="14lw5sxrdvidk0465a7x0jz74cvqjbqv0wlqdy78qzbq4ilcmcaa"; depends=[]; }; symDMatrix = derive2 { name="symDMatrix"; version="1.0.0"; sha256="0xss7f7hkrf2afchccfavymylfybnp9nxawqxd2vdjni95kbd595"; depends=[]; }; - symbolicDA = derive2 { name="symbolicDA"; version="0.4-2"; sha256="1vn7r7b7yyn2kp8j3ghw50z49yzvwhm0izc6wgc7a99300xrr77s"; depends=[ade4 cluster clusterSim e1071 rgl shapes XML]; }; + symbolicDA = derive2 { name="symbolicDA"; version="0.4-3"; sha256="012ha8m3137gns0q38lanpijdrqq6kcw934f2jgnxj6inl6drca0"; depends=[ade4 cluster clusterSim e1071 rgl shapes XML]; }; symbols = derive2 { name="symbols"; version="1.1"; sha256="1234rx3divhg60p0h0zn11viqn51fm6b8876m6rip2i6z8vrg319"; depends=[shape]; }; symmoments = derive2 { name="symmoments"; version="1.2"; sha256="074k0285c0yri39zags420kjls6kjlvlhymg3r7y24h42zdy82d4"; depends=[combinat cubature multipol mvtnorm]; }; synRNASeqNet = derive2 { name="synRNASeqNet"; version="1.0"; sha256="05ncwbv8kvvhqqrxa8qq7s0jc6krs5a56ph04z50iwgd91rzyi7x"; depends=[GenKern igraph KernSmooth parmigene]; }; synbreed = derive2 { name="synbreed"; version="0.12-6"; sha256="03h3j2g6ynnbmsc6yhbmmmrwj69jf3gjpp1wnsd02yc5kf4r1q57"; depends=[abind BGLR doBy doParallel foreach igraph lattice LDheatmap MASS qtl regress]; }; synbreedData = derive2 { name="synbreedData"; version="1.5"; sha256="16wv9r7p0n8726qv0jlizmkvnrqwjj1q4xaxvfmj9611rm47vckx"; depends=[]; }; - synchronicity = derive2 { name="synchronicity"; version="1.1.9.1"; sha256="0d9skpwmsnkn4xb3f2kgyyv8bhdi0r9p1kj3cvi0s92fjjnpi00c"; depends=[BH bigmemory_sri Rcpp]; }; + synchronicity = derive2 { name="synchronicity"; version="1.3.2"; sha256="1idrjzl7nkamf1ip55s6qcf64s63xs9j8z9jv3r89p6r5lw7k5mv"; depends=[BH bigmemory_sri Rcpp uuid]; }; synchrony = derive2 { name="synchrony"; version="0.2.3"; sha256="0fi9a3j8dfslf1nqx8d53fi635y3aq8isxw0dbjbpgk7rc71nzby"; depends=[]; }; synlik = derive2 { name="synlik"; version="0.1.1"; sha256="0g4n78amydihsq4jg2i9barjm9g40zczasb31fj10yn6wir1dhv7"; depends=[Matrix Rcpp RcppArmadillo]; }; synthACS = derive2 { name="synthACS"; version="1.0.1"; sha256="0jbhiadgc8f6h7ga685cm5i8y59lf76r8sgd629xfjj4jxn8ckdm"; depends=[acs data_table Rcpp]; }; - synthpop = derive2 { name="synthpop"; version="1.4-0"; sha256="00xihkk9ybr9fmsxrx47n76nw64l4zjnjymxm609fyigc4cvlgzj"; depends=[classInt foreign ggplot2 lattice MASS nnet party plyr polspline proto randomForest rpart]; }; + synthpop = derive2 { name="synthpop"; version="1.4-1"; sha256="0725gv7b7kj564rf0nz6djvk58i39d9vv4g12qmgnsipgjs9rsrw"; depends=[classInt foreign ggplot2 lattice MASS nnet party plyr polspline proto randomForest rpart]; }; sys = derive2 { name="sys"; version="1.5"; sha256="0yskm5mzps4435yvld9nfp6i5lqdy5ckpdwydvvbyjznz5yv01x2"; depends=[]; }; - sysfonts = derive2 { name="sysfonts"; version="0.7.1"; sha256="04kimfdp895c6839ss7lqahd77jx3lz2gd3i849c2vkwi89v6vs9"; depends=[]; }; + sysfonts = derive2 { name="sysfonts"; version="0.7.2"; sha256="1jl66pyw9khi117523zanjjzdpnpgqdqx190w829xc4ljxzi8n55"; depends=[]; }; sysid = derive2 { name="sysid"; version="1.0.4"; sha256="0fr9gf5yjin3zvz850z4r4pqc1r4mwx8d46sl64i4csdm9qnqagy"; depends=[bitops ggplot2 polynom reshape2 signal tframe zoo]; }; systemfit = derive2 { name="systemfit"; version="1.1-20"; sha256="1qzgx4hn6f71hnk70ccf6inajprrb6my5af8q2manz41577z0ka7"; depends=[car lmtest MASS Matrix sandwich]; }; systemicrisk = derive2 { name="systemicrisk"; version="0.4.1"; sha256="1zimkyj58lk3iq5x4g6a76dain65j36s8c8jhx25sqjr5z2zmfsr"; depends=[lpSolve Rcpp]; }; - syuzhet = derive2 { name="syuzhet"; version="1.0.1"; sha256="0b0w98mx0zf28c55qmv93hfcfcjplrfk68qk2691fas23q14jn56"; depends=[dtt NLP openNLP zoo]; }; - tRophicPosition = derive2 { name="tRophicPosition"; version="0.7.3"; sha256="1r7cn9cxncszykc6rajiv94a937qf4f0rmlhsjfgpshv2sn91cdx"; depends=[coda ggplot2 gridExtra hdrcde MCMCglmm plyr rjags SIBER]; }; + syuzhet = derive2 { name="syuzhet"; version="1.0.4"; sha256="0wf4rls7v7h7zkq2k550d16aqvaij27iim85cwif7dkbinajfngi"; depends=[dplyr dtt NLP textshape tidyr zoo]; }; + tRophicPosition = derive2 { name="tRophicPosition"; version="0.7.5"; sha256="0qmkdsl0b2aw485vpbdqxdlfwg5a3i5bj4l67xv6h51fnbyfqfiz"; depends=[ArgumentCheck coda data_table ggplot2 gridExtra hdrcde MCMCglmm plyr rjags]; }; taRifx = derive2 { name="taRifx"; version="1.0.6"; sha256="10kp06hkdx1qrzh2zs9mkrgcnn6d31cldjczmk5h9n98r34hmirx"; depends=[plyr reshape2]; }; tab = derive2 { name="tab"; version="3.1.2"; sha256="1vc5swfy9p3bsv5bqqgk4w81apzk6d0m1xz0cbhii7rpn7x6zh1h"; depends=[gee survey survival xtable]; }; taber = derive2 { name="taber"; version="0.1.0"; sha256="07a18kn65b4cxxf1z568n7adp6y3qx96nrff3a3714x241sd5p6i"; depends=[dplyr magrittr]; }; @@ -11192,45 +11416,47 @@ in with self; { table1xls = derive2 { name="table1xls"; version="0.4.0"; sha256="0ixbshbp9hkcg12hj32vgb5bp0pj4rbc3i6g1xdg2zhqp7zanics"; depends=[XLConnect]; }; tableHTML = derive2 { name="tableHTML"; version="1.1.0"; sha256="0j2dk11h0dvibppyxjix4pxr6i9ji9ipzaizsr1fadrpk5xzawd5"; depends=[htmltools magrittr shiny]; }; tableMatrix = derive2 { name="tableMatrix"; version="0.8"; sha256="00l03blrrkwdrihqnwz8afx6s3d7a19laj44584546yd3prqx5dy"; depends=[data_table]; }; - tableone = derive2 { name="tableone"; version="0.8.1"; sha256="1rzh59ij53wzhnsxib47pgqmcmk65h0s9i9ifmwcvgjmcx71mn86"; depends=[e1071 gmodels MASS nlme survey zoo]; }; + tableone = derive2 { name="tableone"; version="0.9.2"; sha256="12lyyhfirj768fws1j93qhc6n8b89hrlafixiilsg7fy14w89620"; depends=[e1071 gmodels labelled lmerTest MASS nlme survey zoo]; }; tableplot = derive2 { name="tableplot"; version="0.3-5"; sha256="1jkkl2jw7lwm5zkx2yaiwnq1s3li81vidjkyl393g1aqm9jf129l"; depends=[]; }; tables = derive2 { name="tables"; version="0.8.3"; sha256="1n0kqsvwx2vg7nwyz7hi708xpf2jc9bz3y84aflnzcmbspj1wvf3"; depends=[Hmisc]; }; tabplot = derive2 { name="tabplot"; version="1.3-1"; sha256="0yz3npn36q93gr0k9a4x5swap5fwxfc22b131kif3dfxkgklna06"; depends=[bit ff ffbase]; }; tabplotd3 = derive2 { name="tabplotd3"; version="0.3.3"; sha256="0mbj45vb17wlnndpkhvq7xaawsb814x7zxa4rqbfgidvbm1p3abv"; depends=[brew httpuv RJSONIO Rook tabplot]; }; tabuSearch = derive2 { name="tabuSearch"; version="1.1"; sha256="0bri03jksm314xy537dldbdvgyq6sywfmpmj2g2acdcli31kkpq0"; depends=[]; }; - tabularaster = derive2 { name="tabularaster"; version="0.3.0"; sha256="1wym0m3i8k3vil8ylzn23jlzpaxjh3zndjiq3lwlz9xj8v96ni6n"; depends=[dplyr raster sp spbabel spex tibble viridis]; }; + tabularaster = derive2 { name="tabularaster"; version="0.4.0"; sha256="1hgbynjp19xwpin31j0647ldbzxam2kmkqnvj6v8kd4svps0kr3g"; depends=[dplyr raster sp spbabel spex tibble viridis]; }; tactile = derive2 { name="tactile"; version="0.1.0"; sha256="0ygray05jlxrg7mxg412s04jrxjyskxlrl0xgxir8s6mzjg79iqy"; depends=[gridExtra lattice latticeExtra MASS RColorBrewer]; }; - tadaatoolbox = derive2 { name="tadaatoolbox"; version="0.14.0"; sha256="0rxkmzzmiz5q9chi13mn2l70z3kj8yjrj2hibq26vndxmpxchwz3"; depends=[broom car cowplot DescTools dplyr ggplot2 haven lazyeval lsr magrittr nortest pixiedust pwr ryouready sjlabelled sjmisc vcd viridis]; }; + tadaatoolbox = derive2 { name="tadaatoolbox"; version="0.16.0"; sha256="0i69zyiqq8mc5wfc9r43dpcjhwmq4iwj605n4a6h4hma37jjnc2g"; depends=[broom car DescTools ggplot2 magrittr nortest pixiedust pwr viridis]; }; tagcloud = derive2 { name="tagcloud"; version="0.6"; sha256="04zrh029n8pjlxlr6pdd7xhqqhavbrj3fhvhj6ygzlvi2jslxnwl"; depends=[RColorBrewer Rcpp]; }; tailDepFun = derive2 { name="tailDepFun"; version="1.0.0"; sha256="1z2jrzly1adiwi8y0pndyfggpr0li6sjv9rkrc5mi47s0qjvr5qj"; depends=[copula cubature mvtnorm SpatialExtremes]; }; tailloss = derive2 { name="tailloss"; version="1.0"; sha256="0lmjgjs6d94b70i10vx66fyvlxm5swwqbcjsnqa3lmldzz6m4jc1"; depends=[MASS]; }; tangram = derive2 { name="tangram"; version="0.3.2"; sha256="1dyfyl608k6a7vx9w0s2r6jr0y430qvkqkrrv24wav7snza4d5q2"; depends=[base64enc digest htmltools magrittr R6 stringi stringr]; }; - tatoo = derive2 { name="tatoo"; version="1.0.8"; sha256="1cvdjx0pvjcmhvsvh6c7xysx67bmzbyhr05w79jf0j9dngv3pndn"; depends=[assertthat colt crayon data_table magrittr openxlsx purrr rlang stringi]; }; + tatoo = derive2 { name="tatoo"; version="1.1.0"; sha256="1dsycdp3vln1m1w3nhhrr60x8raw6gbihjpav0d4ad8qla2fq8nh"; depends=[assertthat colt crayon data_table magrittr openxlsx purrr rlang stringi withr]; }; tau = derive2 { name="tau"; version="0.0-20"; sha256="1inpqc2cz1vvjkmp8h3jpjvnvj0y5cwbbj92jlq0322w5w45vip9"; depends=[]; }; tawny = derive2 { name="tawny"; version="2.1.6"; sha256="0s6p0nnz1rpcnn2yfj1vvl54g57d8rv5s4y09azwz1z5ls7vnnlv"; depends=[futile_logger futile_matrix lambda_r lambda_tools PerformanceAnalytics quantmod tawny_types xts zoo]; }; tawny_types = derive2 { name="tawny.types"; version="1.1.3"; sha256="1v0k6nn45rdczjn5ymsp2fqq0ijnlniyf3bc08ibd8yd1jcdyjnj"; depends=[futile_logger futile_options lambda_r lambda_tools quantmod xts zoo]; }; - taxa = derive2 { name="taxa"; version="0.1.0"; sha256="1pfdh68q1x2n6x3idh1c5mbygqhsf2bkbg5c5bri0zj2pxmrmv0g"; depends=[dplyr jsonlite knitr lazyeval magrittr R6 rlang stringr tibble]; }; + taxa = derive2 { name="taxa"; version="0.2.0"; sha256="16jif3s5xf4cawwkhpmjrwb0c4ycmwicrshd5m0arlkcfmq85623"; depends=[dplyr jsonlite knitr lazyeval magrittr R6 rlang stringr tibble]; }; taxize = derive2 { name="taxize"; version="0.9.0"; sha256="07r56nhwqm3rny9d4g7h2azrxad6mg8dpfx9pxmyz5acl5g5xd32"; depends=[ape bold data_table foreach httr jsonlite natserv plyr reshape2 ritis rotl rredlist stringr tibble wikitaxa worrms xml2]; }; taxizedb = derive2 { name="taxizedb"; version="0.1.4"; sha256="15gj9i18ysd83v9fidrrvw938dah04i10ahi3wh5dgjs5fd5ch2s"; depends=[curl DBI dbplyr dplyr hoardr magrittr RMySQL RPostgreSQL RSQLite]; }; - taxlist = derive2 { name="taxlist"; version="0.1.2"; sha256="1cl97f8g92549y177b6888hfrmfvvhzx9gsqv6pbix2a67k8zvcz"; depends=[foreign taxize vegdata]; }; + taxlist = derive2 { name="taxlist"; version="0.1.3"; sha256="0lsphap7brl67y458x29843wkxvvf2ppjn1crz4hby7wmn1psarx"; depends=[foreign taxize vegdata]; }; taxonomizr = derive2 { name="taxonomizr"; version="0.2.2"; sha256="0drzsbr23kr3da6bawjrz8rl976mai0vcz19fr5aypsliqz32b41"; depends=[data_table R_utils RSQLite]; }; tbart = derive2 { name="tbart"; version="1.0"; sha256="0m8l9ic7na70il6r9ha0pyrjwznbgjq7gk5xwa5k9px4ysws29k5"; depends=[Rcpp sp]; }; tbdiag = derive2 { name="tbdiag"; version="0.1"; sha256="1wr2whgdk84426hb2pf8iiyradh9c61gyazvcrnbkgx2injkz65q"; depends=[]; }; tbl2xts = derive2 { name="tbl2xts"; version="0.1.2"; sha256="1zz310253s6gz0hzzldil5r03mm7ngvvnba7hxm8fm9dhfmvkbj6"; depends=[dplyr lazyeval PerformanceAnalytics xts zoo]; }; tcR = derive2 { name="tcR"; version="2.2.1.11"; sha256="1wyxjwyba08m80g2c40sdg3d5brs3qmq8azb6vzwh2wmgqlb5400"; depends=[data_table dplyr ggplot2 gridExtra gtable igraph Rcpp reshape2 scales stringdist]; }; - tcgsaseq = derive2 { name="tcgsaseq"; version="1.6.3"; sha256="05dvbpfyrb3kl8shwr0rd433y0n6j94g5z9sraih2w43p58m01fn"; depends=[CompQuadForm ggplot2 GSA KernSmooth]; }; + tccox = derive2 { name="tccox"; version="0.1.0"; sha256="0b7f8kfsh97viplkjiiy8xm5b94ijnb0m748wqrnxgrvy8ikiy5k"; depends=[survival]; }; + tcgsaseq = derive2 { name="tcgsaseq"; version="1.6.6"; sha256="0sk8fydhfx1c3mrir3qx8bqcif220l6ggzmlw9yw8faha210ak2y"; depends=[CompQuadForm ggplot2 GSA KernSmooth]; }; tcltk2 = derive2 { name="tcltk2"; version="1.2-11"; sha256="1ibxld379600xx7kiqq3fck083s8psry12859980218rnzikl65d"; depends=[]; }; tclust = derive2 { name="tclust"; version="1.3-1"; sha256="1li62wynv81kb17fx7nk63a26qlb78l8fdf63in8yzcl7fkpji7y"; depends=[cluster mclust mvtnorm sn]; }; tcpl = derive2 { name="tcpl"; version="1.2.2"; sha256="1f32qq5816qkyx3n16vgf13g2piv2pqn2nki3c91vg51bwfap7z1"; depends=[data_table DBI numDeriv RColorBrewer RMySQL RSQLite]; }; tdROC = derive2 { name="tdROC"; version="1.0"; sha256="137j1m9pysjcz1gsfcym0438by3c7na21ccjlqf7xfccr1y8k2k6"; depends=[survival]; }; - tdr = derive2 { name="tdr"; version="0.11"; sha256="1ga1lczqj5pka2yz7igxfm83xmkx7lla8pz6ryij0ybn284agszs"; depends=[ggplot2 lattice RColorBrewer]; }; + tdr = derive2 { name="tdr"; version="0.13"; sha256="0i0hnb3fc4d1mbbxcpzmyfh1w2rahfjabg5iyxym3yjd6377al15"; depends=[ggplot2 lattice RColorBrewer]; }; tdthap = derive2 { name="tdthap"; version="1.1-7"; sha256="0lqcw4bzjd995pwn2yrmzay82gnkxnmxxsqplpbn5gg8p6sf5qqk"; depends=[]; }; tea = derive2 { name="tea"; version="1.0"; sha256="03wxhbgx17hl9bbzbfjmfa30q4fqszhs5y9imbp768fmzwbppn24"; depends=[eva]; }; teachingApps = derive2 { name="teachingApps"; version="1.0.2"; sha256="0rdgylcjwgbsasvd2mvi4qp74c3n4vg8yr59a82c2sidfkllci36"; depends=[actuar d3heatmap d3Network data_table devtools diagram DiagrammeR dplyr DT dygraphs ggplot2 knitr leaflet magrittr markdown metricsgraphics miniUI needs networkD3 plotly radarchart Rcpp rprojroot scales shiny shinyAce shinydashboard shinythemes threejs tidyr visNetwork yaml]; }; teamcolors = derive2 { name="teamcolors"; version="0.0.1"; sha256="07mqsbhrsy23qc4j1w1wji36cbh6dijkp6p7g3598nlzhw7ln3aj"; depends=[]; }; teda = derive2 { name="teda"; version="0.1.1"; sha256="0yx469jbkw9cgx73zi5mkykrdn16kn01zh524x9411314aa32avx"; depends=[]; }; - teigen = derive2 { name="teigen"; version="2.2.0"; sha256="0ljm8dz4hndnc37psr7mnl1gbxs1kghygz3cyqzld1xpjwsjc2cz"; depends=[]; }; + teigen = derive2 { name="teigen"; version="2.2.2"; sha256="1k5k3lj6av5pyx130w1j7avd0jdmm12ryc71mi5mq49sp95ndl4v"; depends=[]; }; telegram = derive2 { name="telegram"; version="0.6.0"; sha256="02wwa115f0vz2d9y4nf01397hjkpc3cv2gdl47snrajrm41gji7y"; depends=[curl httr jsonlite R6]; }; + telegram_bot = derive2 { name="telegram.bot"; version="1.0.0"; sha256="10i126wa5dbpzxvr8f9zysfwg53051sk9cjdpdrjva1p3yvyn143"; depends=[httr R6 telegram]; }; tempR = derive2 { name="tempR"; version="0.9.9.12"; sha256="1ipr9yb26f1mmyivbapbb83n1fxa4gpxqgb99p5nx6mzw71vyp4j"; depends=[]; }; tempcyclesdata = derive2 { name="tempcyclesdata"; version="1.0.1"; sha256="0hciachv59kjpjs119r4z24jskzgnassi1yjg3cgl2r0hyglxxc3"; depends=[]; }; tempdisagg = derive2 { name="tempdisagg"; version="0.25.0"; sha256="0zi11jqb3i5kd2z1bbkz8y7g16kmkcn3xpkwj2brv0s86wxwsny7"; depends=[]; }; @@ -11240,57 +11466,58 @@ in with self; { tensorA = derive2 { name="tensorA"; version="0.36"; sha256="1xpczn94a6vfkfibfvr71a7wccksg16pc22h0inpafna4qpygcwp"; depends=[]; }; tensorBF = derive2 { name="tensorBF"; version="1.0.1"; sha256="1rnsff1ypwhn5z0xsxyk2z7jl6igscma1a0w613i81qf37iy81ba"; depends=[tensor]; }; tensorBSS = derive2 { name="tensorBSS"; version="0.3.3"; sha256="1frda6k2jx6gjvnhkk7xjj8pbnc20jk0l8fzjsvgn40wf82xs3ff"; depends=[JADE Rcpp RcppArmadillo tensor tsBSS]; }; - tensorflow = derive2 { name="tensorflow"; version="1.4.1"; sha256="02cadbnihkqinzvm3hgp5jg0k81xkynqihwz16c14qh76fx6ha9l"; depends=[config jsonlite processx reticulate rstudioapi tfruns yaml]; }; + tensorflow = derive2 { name="tensorflow"; version="1.5"; sha256="00g5fdr0ij2ximmqgd7a1hz66462lkjf4q6pn0knkhxcgp7jv8nn"; depends=[config jsonlite processx reticulate rstudioapi tfruns yaml]; }; tensorr = derive2 { name="tensorr"; version="0.1.0"; sha256="00zqklz3hqjv20giwqnd1d62x5hdm620hfdkn1x75i87dv92qn8m"; depends=[assertive_base assertive_properties assertive_types Matrix purrr]; }; tensr = derive2 { name="tensr"; version="1.0.0"; sha256="05gclhljflkz98hgiq5bgbqjz8icxbdq6b84bn2995cx7v0x85ds"; depends=[]; }; tergm = derive2 { name="tergm"; version="3.4.1"; sha256="10sanqbnqdyqafjjcwm99zfnpgrv18z4y2rgaq5wqq7nni184hfm"; depends=[coda ergm MASS network networkDynamic nlme robustbase statnet_common]; }; termstrc = derive2 { name="termstrc"; version="1.3.7"; sha256="12bycwhjrhkadafcckc30jr0md0ssj21n4v75yjhy21yvqjx1d7a"; depends=[lmtest Rcpp rgl sandwich urca zoo]; }; ternvis = derive2 { name="ternvis"; version="1.1"; sha256="16q1a1ns7q0d46js2m1hr6zm8msg3ncgp8w7yrwch11xq0759sb4"; depends=[dichromat mapdata maps maptools quadprog]; }; - tesseract = derive2 { name="tesseract"; version="1.6"; sha256="1apcmbkrbyrcdjc39w46shbic404pnkmqqdr0bdp193svp5df8rb"; depends=[curl digest rappdirs Rcpp]; }; + tesseract = derive2 { name="tesseract"; version="1.9"; sha256="0lrqh8s8xnz8yz52fjn9h8jv0xpf3nmkk7ic3zvlq96msa089szi"; depends=[curl digest rappdirs Rcpp stringr xml2]; }; testassay = derive2 { name="testassay"; version="0.1.0"; sha256="06gks3k04m45kn946i525261v33ymwxpvgdy84kc7sp01xxx4rfv"; depends=[]; }; tester = derive2 { name="tester"; version="0.1.7"; sha256="1x5m43abk3x3fvb2yrb1xwa7rb4jxl8wjrnkyd899ii1kh8lbimr"; depends=[]; }; testforDEP = derive2 { name="testforDEP"; version="0.2.0"; sha256="1mgzhj8b35r5cm4bl0nnyxj0h7rwd28d17qvgvaky2kvm2r83cf9"; depends=[Hmisc minerva Rcpp]; }; testit = derive2 { name="testit"; version="0.7"; sha256="07qsnhghdgyxdknzq7ngpkf3qw9939m3lvk9dv9nk2zypy4jhcq3"; depends=[]; }; - testthat = derive2 { name="testthat"; version="1.0.2"; sha256="0pj1r01x4ny4capr83dfa19hi5i2sjjxky99schzip8zrq5dzxqf"; depends=[crayon digest magrittr praise R6]; }; - testthis = derive2 { name="testthis"; version="1.0.2"; sha256="0h182lz4gp7ziq760lg0f9c8vv79d3kmf06pk7ry5zhhq8mmcib3"; depends=[assertthat devtools magrittr rprojroot stringi testthat usethis]; }; + testthat = derive2 { name="testthat"; version="2.0.0"; sha256="155l53kb69jga5d8c5nvdwqlvlgfmk4vzyyl4d0108j53jnlgh1v"; depends=[cli crayon digest magrittr praise R6 rlang withr]; }; + testthis = derive2 { name="testthis"; version="1.0.3"; sha256="1q42nhp4nsazn31lxymb3zfj928ygbiv6jy7f0j4m3p02w2hqz5n"; depends=[assertthat devtools magrittr rprojroot stringi testthat usethis]; }; tetraclasse = derive2 { name="tetraclasse"; version="0.1.21"; sha256="1cl2cah0xi6x3rvvdy56iszai6rkbxc1w3x13v0l1z1nryff7c6a"; depends=[dplyr FactoMineR ggplot2 ggrepel magrittr reshape2 tibble tidyr]; }; texPreview = derive2 { name="texPreview"; version="1.1.0"; sha256="085aa9qgnmf3mqan2pff0gcdrz7kxd84r12lz780r1mr05ckk8zk"; depends=[magick rstudioapi svgPanZoom xml2]; }; texmex = derive2 { name="texmex"; version="2.4"; sha256="0s3x681f1qnbgmzi5iwqpmkfzpx9gsccd3q1vz1dppzq8fbid3c2"; depends=[ggplot2 mvtnorm]; }; - texmexseq = derive2 { name="texmexseq"; version="0.3"; sha256="08zjsb541xqqs3lj7avx5147g2d0bh3v036x615srjx2pbxzhsvg"; depends=[dplyr ggplot2 testthat]; }; texreg = derive2 { name="texreg"; version="1.36.23"; sha256="0yxaqimd7cyfrfpia6fnqm15lgs0bf5zyjzmnfm1v4qmf8kj8x6v"; depends=[]; }; - text2vec = derive2 { name="text2vec"; version="0.5.0"; sha256="00bimgj82fbbicvbki22m3xvs42jqml3w3fmpw5rz743z2p8y34p"; depends=[data_table digest foreach futile_logger irlba magrittr Matrix R6 Rcpp RcppParallel sparsepp uuid]; }; - textTinyR = derive2 { name="textTinyR"; version="1.0.8"; sha256="1z671yahpvw89gp23c5v0850672v4bd7yjg2z4lbsm7gj3lp87f4"; depends=[BH data_table Matrix R6 Rcpp RcppArmadillo]; }; + text2vec = derive2 { name="text2vec"; version="0.5.1"; sha256="0vcp50mgpgxbf534vd8l56m8006i3sh8a4v9nrf9vxkq2pv7xygc"; depends=[data_table digest foreach futile_logger irlba Matrix mlapi R6 Rcpp RcppParallel sparsepp stringi]; }; + textTinyR = derive2 { name="textTinyR"; version="1.0.9"; sha256="1spzmxywzx6xk9z8jwhyab1g96rjq979zkb4sabl0sp362ccalfy"; depends=[BH data_table Matrix R6 Rcpp RcppArmadillo]; }; textcat = derive2 { name="textcat"; version="1.0-5"; sha256="039bzyz4jvh1hl2a2pfp328kr2mpb1a07j79yqf5cbqk3d5a197b"; depends=[slam tau]; }; - textclean = derive2 { name="textclean"; version="0.3.1"; sha256="1k8wjzzh6nplrnyxq4cd7q4q0sn2fa5p5r2kaq2rd4j9sqrrypp0"; depends=[english qdapRegex stringi textshape]; }; + textclean = derive2 { name="textclean"; version="0.6.3"; sha256="0i6linb782257clkdpl7rv354myl9wc1417ad2glhh53lgcprfk2"; depends=[data_table english lexicon qdapRegex stringi textshape]; }; texteffect = derive2 { name="texteffect"; version="0.1"; sha256="0fwcbz7bpynvcivac16z77j8d398bf7vl4l8sppi9yvg72l0k94w"; depends=[boot ggplot2 MASS]; }; textgRid = derive2 { name="textgRid"; version="1.0.1"; sha256="1wi5vq5f7ixhz39l5hqi2jlmjjacx4lyrs4h8xfbd47pj6g16lc6"; depends=[]; }; textile = derive2 { name="textile"; version="0.1.2"; sha256="067zli6sl7bp9843spgx47hmw55aq61yinqw1lqifmrpk7b0ywk5"; depends=[]; }; - textir = derive2 { name="textir"; version="2.0-4"; sha256="1ky22xar980afyydddahppad9m263mxnrdqpj1fcbmdhg8flwjgz"; depends=[distrom gamlr Matrix]; }; - textmineR = derive2 { name="textmineR"; version="2.0.6"; sha256="1rmypjg4p1gazyi1jvxc145yha2dg2mkkm5hm6y37is2h62badx2"; depends=[lda Matrix Rcpp RcppArmadillo RcppProgress RSpectra SnowballC stringr text2vec tm topicmodels]; }; + textir = derive2 { name="textir"; version="2.0-5"; sha256="0ban5qiinlxizqpcgafv4b5gwxlil6jdfarjd6l1m48awxh3mlnb"; depends=[distrom gamlr Matrix]; }; + textmineR = derive2 { name="textmineR"; version="2.1"; sha256="1bnpnwpgnqcm22hhxmhqm445brry9cq3bzqkk51zj14q38sccx31"; depends=[lda Matrix Rcpp RcppArmadillo RcppProgress RSpectra SnowballC stringr text2vec tm topicmodels]; }; textmining = derive2 { name="textmining"; version="0.0.1"; sha256="16wiykhrjs4djwa7q2wm4g8b3mrhh6hq9d9876w1j7c2s6zx69gd"; depends=[caret dplyr koRpus mallet networkD3 NLP rJava slam SnowballC stylo tm topicmodels wordcloud]; }; textometry = derive2 { name="textometry"; version="0.1.4"; sha256="17k3v9r5d5yqgp25bz69pj6sw2j55dxdchq63wljxqkhcwxyy9lh"; depends=[]; }; - textrank = derive2 { name="textrank"; version="0.1.0"; sha256="1hs7k3sgqb4k1w9m87wxw3n4mf9hk5xw654x759chi7jprisnbyr"; depends=[data_table digest igraph]; }; - textreadr = derive2 { name="textreadr"; version="0.5.1"; sha256="03j69xn5ligqypkkhj4w0avl4nzn5c87hz3ycz7cwlm2symkwadw"; depends=[antiword curl pdftools readxl rvest textshape xml2]; }; + textrank = derive2 { name="textrank"; version="0.2.0"; sha256="0s2mnid3dha3nyyc9abhb36vlij4bg0024i9ay4pvvy4l1x947gr"; depends=[data_table digest igraph]; }; + textreadr = derive2 { name="textreadr"; version="0.7.0"; sha256="081lqqclx2dlrv341178dagd5zajndf27lbrkrv78668cdfk58xr"; depends=[antiword curl data_table pdftools readxl rvest striprtf textshape xml2]; }; textreg = derive2 { name="textreg"; version="0.1.4"; sha256="0k7hpvvhacz29d3mvnygg6rqmh9f3ghkcp7kjmvv9jnr2ipw2j21"; depends=[NLP Rcpp tm]; }; textreuse = derive2 { name="textreuse"; version="0.1.4"; sha256="0qfp7ffzb5p3k3wiw8i1zjskni8f38rzkjnss97j9f3vhhb8j4r7"; depends=[assertthat BH digest dplyr NLP Rcpp RcppProgress stringr tidyr]; }; textshape = derive2 { name="textshape"; version="1.5.0"; sha256="0hvp3mz7j2qkw38jg9cj92ikhyic1c9w8jk07z3vh3f5cm1klvbm"; depends=[data_table slam stringi]; }; textstem = derive2 { name="textstem"; version="0.1.2"; sha256="172y1hvxhb33syqj5y369aq7fvcyn659cx6abcz7i5na8q1v9v0l"; depends=[dplyr hunspell koRpus lexicon quanteda SnowballC stringi textclean textshape]; }; textutils = derive2 { name="textutils"; version="0.1-6"; sha256="0xvsd6pfg4kv40l14xcvmirqiq8rmky4s8v8diagzri3a7i45nqn"; depends=[]; }; + tfdatasets = derive2 { name="tfdatasets"; version="1.5"; sha256="1ik6rzfnjmm54m7s2rvp1bq5jk0k2vl631bz3db3dk639jndiz6a"; depends=[magrittr reticulate rlang tensorflow tidyselect]; }; tfer = derive2 { name="tfer"; version="1.1"; sha256="19d31hkxs6dc4hvj5495a3kmydm29mhp9b2wp65mmig5c82cl9ck"; depends=[]; }; + tfestimators = derive2 { name="tfestimators"; version="1.5"; sha256="069j6d5i19yc3nhxrrzwzassv4fv3bdhygxvqqc49nndyf5vwwbj"; depends=[magrittr progress purrr reticulate rlang tensorflow tfruns tibble tidyr tidyselect]; }; tfplot = derive2 { name="tfplot"; version="2015.12-1"; sha256="1x007j6ibbzfr0kncvsr4c7295jv3c4amg2dpyjvdir9h665nc23"; depends=[tframe]; }; tframe = derive2 { name="tframe"; version="2015.12-1"; sha256="0k0favda3z6zdg7ykc2nnl28gxz7sfzbyr5pcifiyi984pa2zgfx"; depends=[]; }; tframePlus = derive2 { name="tframePlus"; version="2016.7-1"; sha256="12xi2xw4pr78n3cppfknpxmjp2263pb4kqj9v412yxwp82rgb6yk"; depends=[tframe timeSeries]; }; - tfruns = derive2 { name="tfruns"; version="1.0"; sha256="1anizl9vricvhfi3mvr86v7ld8mnpiv9160ffa9cmh7p6g8crxsz"; depends=[base64enc config jsonlite magrittr reticulate rlang rstudioapi tibble tidyselect whisker yaml]; }; + tfruns = derive2 { name="tfruns"; version="1.3"; sha256="02ib3k3jsmskk5cdxl2nyvnvpn7nlkgjb353z7qlwal0fgrssaln"; depends=[base64enc config jsonlite magrittr reticulate rlang rstudioapi tidyselect whisker yaml]; }; tgcd = derive2 { name="tgcd"; version="2.0"; sha256="1553f464jpmngdj8fmbjn9cpmrcp4ysgsfx4w7q4pm4csslsqvlr"; depends=[]; }; tggd = derive2 { name="tggd"; version="0.1.1"; sha256="1izar1b3w148vp2r8gv3vpwfndib8ilxcjxgbfzbxn7q5mr73mwa"; depends=[gsl]; }; - tglm = derive2 { name="tglm"; version="1.0"; sha256="1gv33jq3bzd5wlrqjvcfb1ax258q9asawkdi64rbj18qp7fg2dbx"; depends=[BayesLogit coda mvtnorm truncnorm]; }; tgp = derive2 { name="tgp"; version="2.4-14"; sha256="1l3kssjkh5sbrh75qdpmynjfnidgz8vmzq1jml1qm1yfwval8ak1"; depends=[maptree]; }; tgram = derive2 { name="tgram"; version="0.2-3"; sha256="0vlnry8drq3fqfy8dk50pcwcx9dj657kx6s19fs2b6acigkr4g7w"; depends=[zoo]; }; thankr = derive2 { name="thankr"; version="1.0.0"; sha256="089ikp85d5ia6a1qzmw8dkgcmz628cibmwfzcpk7m3ii8acxq91w"; depends=[]; }; themetagenomics = derive2 { name="themetagenomics"; version="0.1.0"; sha256="1p8qyvll6a9yx2akny1087f73r6p5zi6cf1si7b8i786bcs9khwj"; depends=[ggplot2 lda lme4 Matrix plotly Rcpp rstan scales shiny stm]; }; thermocouple = derive2 { name="thermocouple"; version="1.0.2"; sha256="1rlvhw3i83iq1vibli84gj67d98whvgkxafwpmisva1m4s1bmij4"; depends=[]; }; + theseus = derive2 { name="theseus"; version="0.1.0"; sha256="1f6vl0m8fcchafn78vrfw610d0sp9rf8kd3q5n7b0zd2yby10dq0"; depends=[dplyr ggplot2 gridExtra magrittr phyloseq ShortRead splancs tidyr tidyverse vegan viridis]; }; thgenetics = derive2 { name="thgenetics"; version="0.3-4.1"; sha256="05g5rwdpnd1b4h1lay2l1s0ns2q6a7sav8d4zrxaqgzhaafnpxyv"; depends=[]; }; - thief = derive2 { name="thief"; version="0.2"; sha256="14xl5l7iw0nwbz5zzd00c8ihfclvhfcazvysr8rapsq1j2r5dfck"; depends=[forecast forecTheta ggplot2 hts]; }; + thief = derive2 { name="thief"; version="0.3"; sha256="12ymkkisg5p0g1gmvlczhp4dc7mirjg55fqqmz2d90673vlg6rfq"; depends=[forecast ggplot2 hts]; }; threeboost = derive2 { name="threeboost"; version="1.1"; sha256="033vwn42ys81w6z90w5ii41xfihjilk61vdnsgap269l9l0c8gmn"; depends=[Matrix]; }; threejs = derive2 { name="threejs"; version="0.3.1"; sha256="1s3rdlzy7man6177ycayg6xsh6k8y1r9rdj9yzn3b93j2rs0nxbi"; depends=[base64enc crosstalk htmlwidgets igraph]; }; threewords = derive2 { name="threewords"; version="0.1.0"; sha256="083y5i4qyl1wj017wy5ywl2yx9wvrpjl9g9k9clvnrbwzbycx2cg"; depends=[httr]; }; @@ -11298,23 +11525,28 @@ in with self; { thregI = derive2 { name="thregI"; version="1.0.4"; sha256="0zddd32fnfi98zwq08akkvhkg3c66sj3jii6ap8p1m9a0wg2k2k3"; depends=[Formula survival]; }; threshr = derive2 { name="threshr"; version="1.0.0"; sha256="1zrhmqpz3k2gyddrzg96yyyc1jffj3aic2dmbidxxc97b9g5hi53"; depends=[revdbayes rust]; }; thsls = derive2 { name="thsls"; version="0.1"; sha256="18z7apskydkg7iqrs2hgnzby578qsvyd73wx8v4z3aa338lssdi7"; depends=[Formula]; }; - tibble = derive2 { name="tibble"; version="1.3.4"; sha256="02vn6yqzcvmazy5jaqar3wwbrmh83a1bfgsqgk0hgz38i80zgvm7"; depends=[Rcpp rlang]; }; - tibbletime = derive2 { name="tibbletime"; version="0.0.2"; sha256="1wg0ysqm5ica34vq64dk496gnfwxcvn3pmfpynvrkykl4f6zx3ra"; depends=[assertthat dplyr lubridate magrittr purrr rlang stringr tibble tidyr]; }; + tibble = derive2 { name="tibble"; version="1.4.2"; sha256="05svbjkm1xqv56ybjgsqqg2pp8nn6hams1yxcr8aanbhzx9h6rqi"; depends=[cli crayon pillar rlang]; }; + tibbletime = derive2 { name="tibbletime"; version="0.1.1"; sha256="15rp66p4pgiv7fd0rx1pzqlpsg4i4j5j368cwqm1mf1m4xknz6yy"; depends=[assertthat dplyr glue hms lubridate purrr Rcpp rlang tibble zoo]; }; tibbrConnector = derive2 { name="tibbrConnector"; version="1.5.1"; sha256="1r58myi7x4hqqvyrphxy4ppa1lnad6x2ginfq2j52ax53zr07ajp"; depends=[RCurl rjson]; }; tictactoe = derive2 { name="tictactoe"; version="0.2.2"; sha256="1fx8plj5zr04xwk5hfj3zqhcknidxlzya2q14cf0m3y33a86lx42"; depends=[hash]; }; tictoc = derive2 { name="tictoc"; version="1.0"; sha256="1zp2n8k2ax2jjw89dsri268asmm5ry3ijf32wbca5ji231y0knj7"; depends=[]; }; - tidyRSS = derive2 { name="tidyRSS"; version="1.2.2"; sha256="1vyn6fr25b0216716sp26rg3gdklqz60m6hffd01m52pvwvhk9qx"; depends=[dplyr httr jsonlite lubridate magrittr purrr testthat tibble xml2]; }; + tidyLPA = derive2 { name="tidyLPA"; version="0.1.2"; sha256="11xc8lnhs63ykaq2g3jzrp4kz48zz03cvw5s935fvhsp05drf6g5"; depends=[dplyr forcats ggplot2 magrittr mclust purrr readr rlang stringr tibble tidyr]; }; + tidyRSS = derive2 { name="tidyRSS"; version="1.2.3"; sha256="1m21cwdbhial4h3084vqs0j6zwa267ia75gyjivprqjzcccjaqdp"; depends=[dplyr httr jsonlite lubridate magrittr purrr testthat tibble xml2]; }; tidyboot = derive2 { name="tidyboot"; version="0.1.0"; sha256="1h997hrwacm91myhy93jrinx0h715da76wm9kwz9nwwzisv62m6k"; depends=[dplyr modelr purrr rlang tidyr]; }; - tidycensus = derive2 { name="tidycensus"; version="0.3.1"; sha256="0y77g3zllv5am88ml2zk96slfg8lvmmp4jg6w96bp1xzmgkvwg6h"; depends=[dplyr httr jsonlite purrr rappdirs readr rvest sf stringr tidyr tigris units xml2]; }; + tidycensus = derive2 { name="tidycensus"; version="0.4.1"; sha256="1ay6qw25r809fpgs0fsvblgsrpi91ph82mm2w21vj59gba1bkr71"; depends=[dplyr httr jsonlite purrr rappdirs readr rvest sf stringr tidyr tigris units xml2]; }; tidygenomics = derive2 { name="tidygenomics"; version="0.1.0"; sha256="0n6km2zhdmbgacn6rzamrn506d9y3sl6yp2q6fd9x7kzgz09aq4n"; depends=[dplyr fuzzyjoin IRanges purrr Rcpp tidyr]; }; - tidygraph = derive2 { name="tidygraph"; version="1.0.0"; sha256="1z0jmhwj3m1xk9zmds2riyqmq189716j5qi6ijgf3xni3n25c0m0"; depends=[dplyr igraph magrittr R6 Rcpp rlang tibble tidyr]; }; + tidygraph = derive2 { name="tidygraph"; version="1.1.0"; sha256="1cqmii1pia5s8cj1hfm5jh4qgg9dn65dcb666bqfhq51nzgwy6b4"; depends=[dplyr igraph magrittr R6 Rcpp rlang tibble tidyr]; }; + tidyhydat = derive2 { name="tidyhydat"; version="0.3.2"; sha256="0an22qpxz5sjg4grh54swp62px5428rk553flz73h0islp6wqnq6"; depends=[cli crayon DBI dbplyr dplyr httr lubridate rappdirs readr RSQLite tibble tidyr]; }; + tidyinftheo = derive2 { name="tidyinftheo"; version="0.2.1"; sha256="1lh1smhnfg5x35ans3rlj6nvrqwkaiac3ycy7r8wz5h9fhlri3pg"; depends=[dplyr ggplot2 infotheo magrittr purrr rlang tibble tidyselect tidyverse]; }; tidyposterior = derive2 { name="tidyposterior"; version="0.0.1"; sha256="09q2j6kjwqphdzi60w26mlax9fnmndw7s3fsxfcj0pjjl8688w52"; depends=[broom dplyr ggplot2 purrr rlang rsample rstanarm tibble tidyr]; }; - tidyquant = derive2 { name="tidyquant"; version="0.5.3"; sha256="1vvmx0l5vd434gjsqd19vlnzk0hxgh82b1dsf2zwshc9hni1b75l"; depends=[broom curl devtools dplyr ggplot2 httr lazyeval lubridate magrittr PerformanceAnalytics purrr Quandl quantmod readr rvest scales stringr tibble tidyr tidyverse timeSeries timetk tseries TTR XLConnect xml2 xts zoo]; }; - tidyr = derive2 { name="tidyr"; version="0.7.2"; sha256="1700fry2b3d3ksj7x2f09xl6agjrdnx1rqsc1r8gvzsp5cpflb06"; depends=[dplyr glue magrittr purrr Rcpp rlang stringi tibble tidyselect]; }; + tidypredict = derive2 { name="tidypredict"; version="0.1.0"; sha256="1dvyzckndn3hjfylp38mi27lq4f9w87ra5rx5r177qni8ybifiyz"; depends=[dplyr purrr rlang tibble tidyr]; }; + tidyquant = derive2 { name="tidyquant"; version="0.5.4"; sha256="1ip3vivn6x0ip2y4izq4cz5lh31ygsymkvbb4jqvb8dj5wywr2hq"; depends=[alphavantager broom curl devtools dplyr ggplot2 httr lazyeval lubridate magrittr PerformanceAnalytics purrr Quandl quantmod readr rvest scales stringr tibble tidyr tidyverse timeSeries timetk tseries TTR xml2 xts zoo]; }; + tidyr = derive2 { name="tidyr"; version="0.8.0"; sha256="1qjpbj1a2vw6nw4hdb6fgassnrxrdpqwf9a8i6wqnv3wxvjb6zqb"; depends=[dplyr glue magrittr purrr Rcpp rlang stringi tibble tidyselect]; }; tidyselect = derive2 { name="tidyselect"; version="0.2.3"; sha256="0b0w30yq30c7bwpaghp3hp0nncqwcmvrra9j58fhx9jihay3l68c"; depends=[glue purrr Rcpp rlang]; }; tidystats = derive2 { name="tidystats"; version="0.1"; sha256="0dy4yqdc0y8pmix29100x80q828rapnq9y3qn2p6rs763c7canmr"; depends=[dplyr magrittr purrr readr tibble tidyr]; }; - tidystringdist = derive2 { name="tidystringdist"; version="0.1.0"; sha256="0244xasr2jld6acfgayqj9ks366gdd8mk0hws6rm9w380ihzw408"; depends=[rlang stringdist]; }; - tidytext = derive2 { name="tidytext"; version="0.1.5"; sha256="1973dawvjznn197hvf3malabp5gck6j4isbq0kzjajc3y0akfcvn"; depends=[broom dplyr hunspell janeaustenr Matrix purrr rlang stringr tokenizers]; }; + tidystringdist = derive2 { name="tidystringdist"; version="0.1.2"; sha256="1jk5yqkjf33arbbfgfzk7ym943gy95n3yncybmvwbjsff07qpmaw"; depends=[attempt dplyr magrittr purrr rlang stringdist]; }; + tidytext = derive2 { name="tidytext"; version="0.1.7"; sha256="1pvf46z1jiwi1j0z917mml1cg9527zkdckh8h3d1ks4wawz099a9"; depends=[broom dplyr hunspell janeaustenr Matrix purrr rlang stopwords stringr tokenizers]; }; + tidytree = derive2 { name="tidytree"; version="0.1.6"; sha256="0x9lwgnsz7iz1xdaiz7q9cff1v7888fi5yb6d65lqcgzlc2ipxbz"; depends=[ape dplyr lazyeval magrittr tibble]; }; tidyverse = derive2 { name="tidyverse"; version="1.2.1"; sha256="0yy3fkjksgcn6wkbgsb0pbnmsyqs4m01mziqafhig578nixs4rxd"; depends=[broom cli crayon dbplyr dplyr forcats ggplot2 haven hms httr jsonlite lubridate magrittr modelr purrr readr readxl reprex rlang rstudioapi rvest stringr tibble tidyr xml2]; }; tidyxl = derive2 { name="tidyxl"; version="1.0.0"; sha256="1bsvxsz24qbk9wca8kh4qrb4fi22i49vpciq1pm5c48jb11bjb6b"; depends=[piton Rcpp]; }; tiff = derive2 { name="tiff"; version="0.1-5"; sha256="0asf2bws3x3yd3g3ixvk0f86b0mdf882pl8xrqlxrkbgjalyc54m"; depends=[]; }; @@ -11324,8 +11556,8 @@ in with self; { tigger = derive2 { name="tigger"; version="0.2.11"; sha256="1kbqlfr3lsiiv0l7dzahna706zb4mx0gfx91220n2ckfc81pyrv5"; depends=[alakazam doParallel dplyr foreach ggplot2 iterators lazyeval tidyr]; }; tightClust = derive2 { name="tightClust"; version="1.0"; sha256="0psyzk6d33qkql8v6hzkp8mfwb678r95vfycz2gh6fky7m5k3yyz"; depends=[]; }; tigreBrowserWriter = derive2 { name="tigreBrowserWriter"; version="0.1.4"; sha256="0c733mb2fzskrfa4664w6psp80wdr5hc7f9rp516y59a8rr3xzr0"; depends=[DBI RSQLite]; }; - tigris = derive2 { name="tigris"; version="0.5.3"; sha256="0ic4l91dd97gmbqm6jgwkx34gsna6asaq14prmjq8y8n4bw7dkvf"; depends=[dplyr httr magrittr maptools rappdirs rgdal rgeos sf sp stringr uuid]; }; - tikzDevice = derive2 { name="tikzDevice"; version="0.10-1"; sha256="1fjxzmp9wrf9bigzb4hkp2cb64sd6x4yhrjd6gryw17cqrblhicg"; depends=[filehash png]; }; + tigris = derive2 { name="tigris"; version="0.6.2"; sha256="0m4zramm38111rzifh0lqyly2dgdfgg5y39sns2rp8x1n0b69bc2"; depends=[dplyr httr magrittr maptools rappdirs rgdal sf sp stringr uuid]; }; + tikzDevice = derive2 { name="tikzDevice"; version="0.10-1.2"; sha256="1rwxmjwmjr1dssg9dx7rc6nz11225pz2ac9rhp8581slwzw79icl"; depends=[filehash png]; }; tileHMM = derive2 { name="tileHMM"; version="1.0-7"; sha256="1ks4b6h15982jh3ls9fz8hq9ac1wf5hfjsvdqcmnba8n3m5zm651"; depends=[corpcor st]; }; tilegramsR = derive2 { name="tilegramsR"; version="0.2.0"; sha256="11cnyvlghg8z7lr9ahzsjpyjrqnxqs77wdcydqvavrsqj745xvi2"; depends=[sf sp]; }; tilting = derive2 { name="tilting"; version="1.1.1"; sha256="0srvxjv3sg35n7f8pam45ny1z1dxwqjkrz9d91hf67a3fi34f5gk"; depends=[mvtnorm]; }; @@ -11339,21 +11571,22 @@ in with self; { timelineR = derive2 { name="timelineR"; version="0.1.0"; sha256="1a2pdy5b9nca66khydrb50yzjglr78lxrgzisw6bp2simk5cix51"; depends=[dplyr futile_logger ggplot2 gtable lubridate mtconnectR stringr]; }; timelineS = derive2 { name="timelineS"; version="0.1.1"; sha256="076w8ckzzl59bc1gnwjgdwynnz86320hyfmzb0k26hl3k13jlmxs"; depends=[dplyr ggplot2 lubridate magrittr]; }; timeordered = derive2 { name="timeordered"; version="0.9.8"; sha256="1j0x2v22ybyl3l9r3aaz5a3bxh0zq81rbga9gh63zads2xy5axmf"; depends=[igraph plyr]; }; - timereg = derive2 { name="timereg"; version="1.9.1"; sha256="1rm3b8i3vrajd50rfm39hlyz1idxxwlj73zga2q8gm0md75034rv"; depends=[lava numDeriv survival]; }; + timereg = derive2 { name="timereg"; version="1.9.2"; sha256="0ddckk8vrfkk4kwlrjms6niry6g6c8dz0yf96z2kq03jgs06kfdh"; depends=[lava numDeriv survival]; }; timesboot = derive2 { name="timesboot"; version="1.0"; sha256="1ixmcigi1bf42np93md8d3w464papg9hp85v0c3hg3vl4nsm2bji"; depends=[boot]; }; timeseriesdb = derive2 { name="timeseriesdb"; version="0.2.1"; sha256="0150zs8c8184jzry33aki21prmpnxp3rclp84q6igwxi4grdhlr0"; depends=[DBI reshape2 RJSONIO RPostgreSQL shiny xts zoo]; }; timetk = derive2 { name="timetk"; version="0.1.0"; sha256="0z4zb00c4xbjn3ppz6ypcab2ahkr76mj6v68yfxkjb233cb18641"; depends=[devtools dplyr forecast lazyeval lubridate padr purrr readr stringi tibble tidyr xts zoo]; }; - timetools = derive2 { name="timetools"; version="1.12.3"; sha256="03zppxz9ck5va3bxrszd1wfpbwxhyilbs592kkxxm4q819xgib5m"; depends=[]; }; + timetools = derive2 { name="timetools"; version="1.14"; sha256="13jchgd9fc8hxj74wm1kg4rwcng4yxblkq04i33djsqghgb5f9mj"; depends=[]; }; timetree = derive2 { name="timetree"; version="1.0"; sha256="1fpdp6mkwm67svqvkfflvqxn52y2041zl09rxrms28ybbd5f84c0"; depends=[phangorn XML]; }; timevis = derive2 { name="timevis"; version="0.4"; sha256="08caa5gilh1c0z41lm3ghf6cpnlsdjfm1v7ha73jxv1655kznmpx"; depends=[htmltools htmlwidgets jsonlite magrittr rmarkdown shiny]; }; timma = derive2 { name="timma"; version="1.2.1"; sha256="1pypk0pwkhyilh1hsn8hasia1hf6hbskj0xw6vas03k19b6fjnli"; depends=[QCA Rcpp RcppArmadillo reshape2]; }; timsac = derive2 { name="timsac"; version="1.3.5"; sha256="1p2fwizq95fhbw0jk23sy0qgkkkab0iy37sw71krpm0dzrgi6lj0"; depends=[]; }; tinsel = derive2 { name="tinsel"; version="0.0.1"; sha256="0n1x0cf4x6cq1yks0444nxd9snga4m6inc5lfvb7k96fzjb3xgbp"; depends=[]; }; - tint = derive2 { name="tint"; version="0.0.4"; sha256="16648hqg5gqb57f6bz2yi0wicmw1cx5hk99ra17igjvf1bs77h7j"; depends=[htmltools knitr rmarkdown]; }; + tint = derive2 { name="tint"; version="0.0.5"; sha256="1283rik1ynnhy40lm1dipmwzihsy0pdn383k9m1yczl2fqf1qcfi"; depends=[htmltools knitr rmarkdown]; }; tinyProject = derive2 { name="tinyProject"; version="0.5"; sha256="10sllhjcla4pfgp5n1y5vi318q9bcy82j88rx3k1sgzmbq1nc1c2"; depends=[brew devtools]; }; + tinytex = derive2 { name="tinytex"; version="0.3"; sha256="0mhxlr4709mca9jshnah5i7yjyy6k12s933619p7p9c8nbqj39cn"; depends=[]; }; tipom = derive2 { name="tipom"; version="1.0.2-1"; sha256="1gdfv0g5dw742j6ycmi0baqh6xcchp3yf2n1g8vn7jmqgz5mlhdr"; depends=[]; }; tipr = derive2 { name="tipr"; version="0.1.1"; sha256="138xmkfad0xjrmr9v3ladbwsyknyad27wxcav03n6f72plhxmxb6"; depends=[broom purrr tibble]; }; - tis = derive2 { name="tis"; version="1.32"; sha256="1qiywhsqgshs5v7780wlyic9ykxdpf26rsywakmb4y6fc3pjrhi7"; depends=[]; }; + tis = derive2 { name="tis"; version="1.34"; sha256="01bpl8q2n49wpr2gghkcv1zf16b3375xa71mv0q7wwn0da3n7m0n"; depends=[]; }; titan = derive2 { name="titan"; version="1.0-16"; sha256="0x30a877vj99z3fh3cw9762j5ci56964j2466xfbwcywhn9njz5r"; depends=[boot lattice MASS]; }; titanic = derive2 { name="titanic"; version="0.1.0"; sha256="0mdmh0ciwfig00847bmvp50cyvj8pra6q4i4vdg7md19z5rjlx3j"; depends=[]; }; titrationCurves = derive2 { name="titrationCurves"; version="0.1.0"; sha256="0z127sihd262mdik46sq9vcf05s7jsqmkpm3p4d779viw74bl768"; depends=[]; }; @@ -11362,7 +11595,7 @@ in with self; { tlemix = derive2 { name="tlemix"; version="0.1.3"; sha256="0c4mvdxlhbmyxj070xyipx4c27hwxlb3c5ps65ipm6gi8v8r6spj"; depends=[]; }; tlm = derive2 { name="tlm"; version="0.1.5"; sha256="1iw08pa70nb25fnv64834s5c8vl456a2rcng7x6v9vs5q37610g6"; depends=[boot]; }; tlmec = derive2 { name="tlmec"; version="0.0-2"; sha256="1gak8vxmfjf05bhaj6lych7bm8hgav1x3h14k2ra7236v82rqbw7"; depends=[mvtnorm]; }; - tm = derive2 { name="tm"; version="0.7-2"; sha256="01j3k9hkd7w8iy1i5k59gnr69h49zv933c7vd59xckjsnh756nz2"; depends=[BH NLP Rcpp slam xml2]; }; + tm = derive2 { name="tm"; version="0.7-3"; sha256="048wrk1grd3r95a46aaxrwsgpj1l5afbzda8434b1zr1wr8y3hzk"; depends=[BH NLP Rcpp slam xml2]; }; tm_plugin_alceste = derive2 { name="tm.plugin.alceste"; version="1.1"; sha256="0wid51bbbx01mjfhnaiv50vfyxxmjxw8alb73c1hq9wlsh3x3vjf"; depends=[NLP tm]; }; tm_plugin_dc = derive2 { name="tm.plugin.dc"; version="0.2-8"; sha256="0z843i2wlmx75748p95jz3j45d9bzmlmqa3awgya24k7bdhpd6kd"; depends=[DSL NLP slam tm]; }; tm_plugin_europresse = derive2 { name="tm.plugin.europresse"; version="1.4"; sha256="03qi9rkfwgjvir4cjpi9imc8zaldvan42v9lqfr5d6zhr0ajy6wx"; depends=[NLP tm XML]; }; @@ -11370,11 +11603,12 @@ in with self; { tm_plugin_lexisnexis = derive2 { name="tm.plugin.lexisnexis"; version="1.3.1"; sha256="15k4bzx1p271yzskkijlf2pm6m7pb5dqxmfab9rhwynllszv96if"; depends=[ISOcodes NLP tm XML]; }; tm_plugin_mail = derive2 { name="tm.plugin.mail"; version="0.1"; sha256="0ca2w2p5zv3qr4zi0cj3lfz36g6xkgkbck8pdxq5k65kqi5ndzyp"; depends=[NLP tm]; }; tm_plugin_webmining = derive2 { name="tm.plugin.webmining"; version="1.3"; sha256="1694jidf01ilyk286q43bjchh1gg2fk33a2cwsf5jxv7jky3gl7h"; depends=[boilerpipeR NLP RCurl RJSONIO tm XML]; }; - tmap = derive2 { name="tmap"; version="1.11"; sha256="0z2nlhpn459srqpzchygc0sc9in5pr91v4l5x8ipyqd14y9ka1zw"; depends=[classInt htmltools htmlwidgets leaflet mapview raster RColorBrewer rgdal rgeos sp spdep tmaptools]; }; - tmaptools = derive2 { name="tmaptools"; version="1.2-2"; sha256="0kp4d1hv3rk96lw8c5nflvkjp9874slrbfmlqg6ks0zk3c8wi93r"; depends=[classInt dichromat geosphere KernSmooth magrittr osmar raster RColorBrewer rgdal rgeos rmapshaper sp spdep XML]; }; + tmap = derive2 { name="tmap"; version="1.11-1"; sha256="0day8hy210a2v2ps9pqcv4mnlx39h7dcj47hkyjsm76qlcdccv3l"; depends=[classInt htmltools htmlwidgets leaflet mapview raster RColorBrewer rgdal rgeos sp spdep tmaptools]; }; + tmaptools = derive2 { name="tmaptools"; version="1.2-3"; sha256="08m8dir5k7da72fp3hcsb055alwzpbxr2f9lxmhdbk991bmwacjr"; depends=[classInt dichromat geosphere KernSmooth magrittr osmar raster RColorBrewer rgdal rgeos rmapshaper sp spdep XML]; }; + tmbstan = derive2 { name="tmbstan"; version="1.0.0"; sha256="01x1nw0mlbpsldrd6hx2g040d9slrhk7hm2pm1v7pci3vxgbpgy9"; depends=[BH Rcpp RcppEigen rstan StanHeaders TMB]; }; tmcn = derive2 { name="tmcn"; version="0.2-8"; sha256="0msgjz32yizl7kfy33mzxjgfj7q3pd0wdly0xzvcmkc254q41bq7"; depends=[]; }; tmg = derive2 { name="tmg"; version="0.3"; sha256="0yqavibinzsdh85izzsx8b3bb9l36vzkp5a3bdwdbh410s62j68a"; depends=[Rcpp RcppEigen]; }; - tmle = derive2 { name="tmle"; version="1.2.0-5"; sha256="06pan7kf1ffs587kayrscqcp4d613ismpzxp8fhfzga02vzvc3a2"; depends=[SuperLearner]; }; + tmle = derive2 { name="tmle"; version="1.3.0"; sha256="0krnf2mzxmcb105gsx1b0gpc009lv27s0brh6sa1sm87a76p6dqd"; depends=[SuperLearner]; }; tmle_npvi = derive2 { name="tmle.npvi"; version="0.10.0"; sha256="00jav1ql3lv18wh9msxnjvz36z2ds44fdi6lrp1pfphh1in4vdcl"; depends=[geometry MASS Matrix R_methodsS3 R_oo R_utils]; }; tmlenet = derive2 { name="tmlenet"; version="0.1.0"; sha256="1pg9w7yci9j0m1cxi0nwdpp6jwap0b7ql4xkh25kjbq3w5r8w8pr"; depends=[assertthat data_table Matrix R6 Rcpp simcausal speedglm stringr]; }; tmod = derive2 { name="tmod"; version="0.31"; sha256="1qqzngqnj4vk170ild34fpzsnpb1125zisf6xx5hp8q899z88q81"; depends=[beeswarm pca3d plotwidgets tagcloud XML]; }; @@ -11386,19 +11620,21 @@ in with self; { tnet = derive2 { name="tnet"; version="3.0.14"; sha256="05cc6jrkjbwxzmgzq30h63xzhlgq8f0l3wx2q54vrv0wpvlvfphn"; depends=[igraph survival]; }; toOrdinal = derive2 { name="toOrdinal"; version="1.0-0.0"; sha256="1y46rcm6v2c5n71hdf5rgsgvy913wiazmml60mlxqb70dvz42649"; depends=[crayon testthat]; }; toaster = derive2 { name="toaster"; version="0.5.5"; sha256="0ga4l3zp422scrgvz701rjznn013vhsbp4gh7v1inqp7kpxafky9"; depends=[foreach GGally ggmap ggplot2 ggthemes memoise network plyr RColorBrewer reshape2 RODBC scales slam wordcloud]; }; + togglr = derive2 { name="togglr"; version="0.1.3"; sha256="033d4mcl2w7nbjmaa5bc28skd63x34k4k4ib94nf11iwdj7bipkw"; depends=[assertthat dplyr getPass glue httr jsonlite keyring lubridate magrittr prettyunits purrr rstudioapi]; }; tokenizers = derive2 { name="tokenizers"; version="0.1.4"; sha256="1qcsmcd74i39wql9p49g3pzc4flpi8jq9sxia5mcdx054viijgk9"; depends=[Rcpp SnowballC stringi]; }; tolBasis = derive2 { name="tolBasis"; version="1.0"; sha256="0g4jdwklx92dffrz38kpm1sjzmvhdqzv6mj6hslsjii6sawiyibh"; depends=[lubridate polynom]; }; tolerance = derive2 { name="tolerance"; version="1.3.0"; sha256="17qh4ad1f3fbcpwlxxqh8qr9bnwjcl4yxk0l3fkbr6b2l4rc5p86"; depends=[rgl]; }; + toolmaRk = derive2 { name="toolmaRk"; version="0.0.1"; sha256="0pdr8lq4c11ia03v68lbfq38p3qp770mbj0nsbjsgbqi0pv9i1vx"; depends=[dplyr ggplot2 plyr reshape2]; }; topicmodels = derive2 { name="topicmodels"; version="0.2-7"; sha256="16qa27pw19an6snqsqmgx439jqjjm8fx2lva3pnz5rd33xf701yc"; depends=[modeltools slam tm]; }; - topmodel = derive2 { name="topmodel"; version="0.7.2-2"; sha256="1nqa8fnpxcn373v6qcd9ma8qzcqwl2md347yql3c8bpqlm9ggz16"; depends=[]; }; + topmodel = derive2 { name="topmodel"; version="0.7.3"; sha256="15w9id90d6l0i0ji3ln3sxnpispb6pgabk4waysqn0nh6y4lfdgb"; depends=[]; }; topologyGSA = derive2 { name="topologyGSA"; version="1.4.6"; sha256="0vas7qab5a86jb277ql63qjvfvx7iqqbcrwky7iyr0s8p8p794ia"; depends=[fields graph gRbase qpgraph]; }; topsis = derive2 { name="topsis"; version="1.0"; sha256="056cgi684qy2chh1rvhgkxwhfv9nnfd7dfzc05m24gy2wyypgxj3"; depends=[]; }; tosls = derive2 { name="tosls"; version="1.0"; sha256="03nqwahap504yvcksvxdhykplbzmf5wdwgpzm7svn8bymdc472v2"; depends=[Formula]; }; + totalcensus = derive2 { name="totalcensus"; version="0.3.0"; sha256="0i7srsfhskfcq7fdc3sq2rq2p6x508pwgbig86l92zki3ljm7qgs"; depends=[data_table magrittr purrr stringr]; }; touch = derive2 { name="touch"; version="0.1-3"; sha256="1zzc4h6y0xmr3p7jl0vlvn4yswxz5akgvz8laxgmjgqzk926g9jl"; depends=[stringr]; }; tourr = derive2 { name="tourr"; version="0.5.5"; sha256="12293kp36kz056zd3fnsaf2gy4g8mcs79ws0vgbs7b0hx09sy9vp"; depends=[]; }; tourrGui = derive2 { name="tourrGui"; version="0.4"; sha256="1g9928q3x9rrd9k3k84r201wss3vjd2pngvbaflk5dqh9yf75jpq"; depends=[Cairo colorspace gWidgets RGtk2 tourr]; }; toxboot = derive2 { name="toxboot"; version="0.1.1"; sha256="0sw0mxhcq5k11swlhfpn6xk0nfsambh2yx1721zx75lya27wkmq1"; depends=[data_table tcpl]; }; - toxplot = derive2 { name="toxplot"; version="0.1.0"; sha256="0sl3ihagfxa7xl2l7xsrmvp6j1pxlrsqcljmwpwrn0sd5sdwyjm0"; depends=[dplyr ggplot2 ggthemes tcpl tidyr]; }; toxtestD = derive2 { name="toxtestD"; version="2.0"; sha256="0b7hmpfhwg626r8il12shni0kw94cqnbj49y4vfh8gn98x1s6m48"; depends=[]; }; tpAUC = derive2 { name="tpAUC"; version="2.1.1"; sha256="0wix9qwcidj7xfqhh7bmrpnadd9qlkvg3515gaamdxkjbz2kyydc"; depends=[pROC]; }; tpe = derive2 { name="tpe"; version="1.0.1"; sha256="0zsa8vb4qmln3sb4lplv43lh50yys9vfd3rxfp6qxqqjxivd0xsh"; depends=[]; }; @@ -11406,13 +11642,14 @@ in with self; { tracer = derive2 { name="tracer"; version="1.0.0"; sha256="1jdh4ljcz7d0w2y5miggqkvv397jdx7fn108hbjw93af2gnh698q"; depends=[clisymbols crayon prettycode]; }; tracheideR = derive2 { name="tracheideR"; version="0.1.1"; sha256="1x1jwzgs2aqb3k17mm9mhfhnbwcmilhkjaz9rl40rcg84xjqdrpl"; depends=[tgram]; }; track = derive2 { name="track"; version="1.1.9"; sha256="1d0hab7xyayyhyyrbv8nvpka1kzry4yx10fg8aqwkca3nm7n2q3c"; depends=[]; }; - trackdem = derive2 { name="trackdem"; version="0.2"; sha256="0gvra57bilx504lijp7gr7z6alkivsnpqi2lbbvcp1dchzaf4gwi"; depends=[MASS neuralnet png raster Rcpp RcppArmadillo SDMTools]; }; + trackdem = derive2 { name="trackdem"; version="0.3.1"; sha256="10qq9217mpd4abhkwsh4yjzpi06qpqa5rnwhxls6yzmymf9apngl"; depends=[MASS neuralnet png raster Rcpp RcppArmadillo SDMTools shiny]; }; trackeR = derive2 { name="trackeR"; version="1.0.0"; sha256="0z200jlkgcdxwss0ckbh3vqcfw56fi7pivr9vzf4rkwyf2n6v25s"; depends=[fda ggmap ggplot2 gridExtra gtable jsonlite leaflet raster RSQLite scam XML zoo]; }; tractor_base = derive2 { name="tractor.base"; version="3.1.0"; sha256="0d3hkxqygyh02v63wny32zdxpsn6m6q8i1630zl1mhrbvq3kmqr5"; depends=[ore reportr]; }; traitr = derive2 { name="traitr"; version="0.14"; sha256="1pkc8wcq55229wkwb54hg9ndbhlxziv51n8880z6yq73zac1hbmf"; depends=[digest gWidgets proto]; }; traits = derive2 { name="traits"; version="0.3.0"; sha256="155y8j69214xxi1bfk07k30zlpm3q6fmz7ydhnkvw0kv4l0i5pc5"; depends=[crul data_table hoardr httr jsonlite readr rvest taxize tibble xml2]; }; traj = derive2 { name="traj"; version="1.2"; sha256="0mq6xdbxjqjivxyy7cwaghwmnmb5pccrah44nmalssc6qfrgys4n"; depends=[cluster GPArotation NbClust pastecs psych]; }; trajectories = derive2 { name="trajectories"; version="0.1-4"; sha256="0vwfbx5s8ywasxwv8cld4s6r96vlyknxipp49rsfpqn94nawhwnx"; depends=[lattice sp spacetime]; }; + trajr = derive2 { name="trajr"; version="1.0.0"; sha256="1q17lgwgxn9j3ym1vikrnnyqf61ri3vl7jqq3f1fvy2280nac0s8"; depends=[plotrix signal]; }; tranSurv = derive2 { name="tranSurv"; version="1.1-4"; sha256="1vsp12x4h0s1lba1kf7n0v71kgm1dz6cjfp8lffm4ps80nahs63l"; depends=[rootSolve SQUAREM survival]; }; transcribeR = derive2 { name="transcribeR"; version="0.0.0"; sha256="0y2kxg2da71i962fhsjxsr2ic3b31fmffhj3gg97b0nykfpcviib"; depends=[httr]; }; translate = derive2 { name="translate"; version="0.1.2"; sha256="1w0xrg1xxwfdanlammmixf06hwq700ssbjlc3cfigl50p87dbc5x"; depends=[functional lisp RCurl RJSONIO]; }; @@ -11425,7 +11662,6 @@ in with self; { tree = derive2 { name="tree"; version="1.0-37"; sha256="091297qhvqhgjmnyr96jkwaghz8dkbf03rnhwfhks8bsgax6jl13"; depends=[]; }; treeClust = derive2 { name="treeClust"; version="1.1-6"; sha256="07cw8mnfrkw733ga3aq4am1pj50g8vk0rw6b3lflnb4wdhm2fgbi"; depends=[cluster rpart]; }; treeDA = derive2 { name="treeDA"; version="0.0.2"; sha256="0ldk7g0bfs8y0znivhj8db5si7glxawicc5zvapbf8d9djlaxxga"; depends=[ggplot2 gtable Matrix mvtnorm phyloseq reshape2 sparseLDA]; }; - treeHFM = derive2 { name="treeHFM"; version="1.0.3"; sha256="10pyvyyz9ia4dpj8zkil56ipbvbks5xh0n9hkdy0hcinsyq0ba29"; depends=[mclust]; }; treebase = derive2 { name="treebase"; version="0.1.4"; sha256="1bx31jahb0wy2g8wl1z71vy659lfi8fq1sbbaxvyixzcwymix1wq"; depends=[ape httr RCurl XML]; }; treeclim = derive2 { name="treeclim"; version="2.0.0"; sha256="0hiba5xc6rp5zzka31k5klmlllpgbnla4pm920zk12jxn796953l"; depends=[abind boot ggplot2 lmodel2 lmtest np plyr Rcpp RcppArmadillo]; }; treecm = derive2 { name="treecm"; version="1.2.2"; sha256="0vrawg4vvy270dn20gb2k99xi4q89l4mjz0mm7ikpz8wxqypzq2l"; depends=[plyr]; }; @@ -11435,15 +11671,14 @@ in with self; { treemapify = derive2 { name="treemapify"; version="2.4.0"; sha256="1cg8jwlls3r3kjlmmxcm9id2spsn5ggsjrw0826ih2khdlnjc0jy"; depends=[ggfittext ggplot2 plyr]; }; treeperm = derive2 { name="treeperm"; version="1.6"; sha256="0mz7p9khrsq4dbkijymfvlwr01y4fvs0x6si4x5xid16s2zsnmm4"; depends=[]; }; treeplyr = derive2 { name="treeplyr"; version="0.1.3"; sha256="00fkmmzivwy603grfbwdabsik1swkyba7sbwcjzxbgsmx3s472g6"; depends=[ape dplyr geiger lazyeval phytools Rcpp]; }; - treespace = derive2 { name="treespace"; version="1.0.0"; sha256="1dc98p5jf9qyr31xa7h7v2zrjmhd3jlzrh2cpmnmhbpfm1cviskj"; depends=[ade4 adegenet adegraphics adephylo ape combinat distory fields htmlwidgets MASS phangorn Rcpp RLumShiny scatterD3 shiny shinyBS]; }; + treespace = derive2 { name="treespace"; version="1.1.1"; sha256="112qic2wxvkcd533hs6bvzzbb7abpylgm9m2bqp1mirrngz3gxp8"; depends=[ade4 adegenet adegraphics adephylo ape combinat distory fields htmlwidgets MASS phangorn phytools Rcpp RLumShiny scatterD3 shiny shinyBS]; }; treethresh = derive2 { name="treethresh"; version="0.1-11"; sha256="1fksyn9mycr6dpw1yh5b3fa7fk7ndz7q39174daplm55jbrz1dr5"; depends=[EbayesThresh wavethresh]; }; trelliscope = derive2 { name="trelliscope"; version="0.9.8"; sha256="1581ss5c3f7mnv6s3p9f8kfwnks0l80kxwpxv9mq61w3lf9fksm2"; depends=[base64enc curl data_table datadr digest DistributionUtils ggplot2 hexbin htmltools htmlwidgets jpeg jsonlite lattice png rsconnect shiny]; }; trelloR = derive2 { name="trelloR"; version="0.1.0"; sha256="0d549yw9pfxs8a3q716z08fzg68bkm5l09cv5iqqkm4gyasrxsf4"; depends=[dplyr httr jsonlite]; }; - trend = derive2 { name="trend"; version="1.0.1"; sha256="1phxl3d7swasgbr1k8w57lsgvqbl8ap4d351x8an2y904ii6gya9"; depends=[extraDistr]; }; + trend = derive2 { name="trend"; version="1.1.0"; sha256="06yifqbsvxbmk5gld4z2nnyhf59v8ks5xjwacmb25mv9r6bn388b"; depends=[extraDistr]; }; trialr = derive2 { name="trialr"; version="0.0.1"; sha256="0v274a4w9pamlp9y7xs8hw783ib7z3p19gx94dciyvgm2wj9h7di"; depends=[BH gtools Rcpp RcppEigen rstan rstantools StanHeaders]; }; triangle = derive2 { name="triangle"; version="0.11"; sha256="0983bvywbyl0sms29j1hby2qy6p984vy4r0q1awh1f8gr01bbk5b"; depends=[]; }; triangulation = derive2 { name="triangulation"; version="0.5.0"; sha256="1zp09g0s0qpqgz2k6jx32pswh2zqyyd0b62lf1dx1p46m28dafkn"; depends=[]; }; - trib = derive2 { name="trib"; version="1.2.0"; sha256="0bvz1cvi2fx40b5rdv4gfama11dn20rz4506k4fjsny32yswpqyw"; depends=[zoo]; }; tribe = derive2 { name="tribe"; version="0.1.6"; sha256="0sx6hyfyg8x0vxq4l4gvv5kb8afrbjp3qk3s48l85vf5v1chwnhf"; depends=[bazar dplyr lazyeval magrittr rlist rstudioapi]; }; triebeard = derive2 { name="triebeard"; version="0.3.0"; sha256="1hqyz57gph02c9fdc07lxz113bbklif3g18sw8jan6pakhhdc7dz"; depends=[Rcpp]; }; trifield = derive2 { name="trifield"; version="1.1"; sha256="0xk48fkd5xa3mfn3pwdya0ihpkwnh20sgj3rc7fmzjil47kqscvy"; depends=[]; }; @@ -11455,9 +11690,10 @@ in with self; { tripEstimation = derive2 { name="tripEstimation"; version="0.0-44"; sha256="1ylpyzlqr6l5haxq4icnlxw6vgvc2lsfz5sm2wqqm4m6h3p0i6s6"; depends=[lattice mgcv rgdal sp zoo]; }; tripack = derive2 { name="tripack"; version="1.3-8"; sha256="0pf707z6xysxvcs508nadga3mglpvmfk6r061qda8acn58ll1cvb"; depends=[]; }; triversity = derive2 { name="triversity"; version="1.0"; sha256="1bar2bpy8jvj91jmzzdwy6rlvirsbxrzqnx4r825irqhc69gc53r"; depends=[data_tree Matrix]; }; - tropAlgebra = derive2 { name="tropAlgebra"; version="0.1.0"; sha256="1pimvcnmj9gg454vxgx0cp8lip89f704w5v6pmlpfj34s7h88474"; depends=[]; }; + tropAlgebra = derive2 { name="tropAlgebra"; version="0.1.1"; sha256="1idvhxhw2f6z8iq0nfdj6jmzy8913vid84rvln6rx2dkzw3s9wnl"; depends=[]; }; tropr = derive2 { name="tropr"; version="0.1.2"; sha256="1nm97sqmj4nfy7h8z58gmd9ipyrkw6skh2wx2g3ivm9pn3m50bwl"; depends=[digest httr magrittr rvest stringr xml2]; }; trotter = derive2 { name="trotter"; version="0.6"; sha256="0i8r2f2klkkfnjm7jhvga3gx6m7r97pd73d88004jzlm9ficspgy"; depends=[]; }; + trtf = derive2 { name="trtf"; version="0.3-0"; sha256="1fca08lkwaa9m7ac69i3k3d8dxn8fp231yh68gz3ym8ja9vhzd7w"; depends=[Formula libcoin mlt partykit sandwich variables]; }; trueskill = derive2 { name="trueskill"; version="0.1"; sha256="0mqvm64fcsxjlh789lqdk6l28q31yhh6jjirwjlgbpxxb90c5107"; depends=[]; }; truncSP = derive2 { name="truncSP"; version="1.2.2"; sha256="1hdi518j3sg9273g01l1jqlmqya3ppim82ma7zakwqpmsjmzw18q"; depends=[boot truncreg]; }; truncdist = derive2 { name="truncdist"; version="1.0-2"; sha256="02ihw4ixhadwr3sqm6r264i8vpcaz8pn69vkzabd8fwqvn5vcj5q"; depends=[evd]; }; @@ -11467,7 +11703,7 @@ in with self; { trust = derive2 { name="trust"; version="0.1-7"; sha256="013gmiqb6frzsl6fsb5pqfdapwdxas0llg954hlcvgki9al5mlg3"; depends=[]; }; trustOptim = derive2 { name="trustOptim"; version="0.8.6.1"; sha256="07xkif11s3mdp4fmhl6zks6p2kdy4fdys2wpa8ibqpc6gd50vhvn"; depends=[Matrix Rcpp RcppEigen]; }; tsBSS = derive2 { name="tsBSS"; version="0.4"; sha256="0mli9y63bp7n21wzz5gga8i0c8f3db6cdcc5jp4zm529svilzkxm"; depends=[forecast ICtest JADE Rcpp RcppArmadillo]; }; - tsDyn = derive2 { name="tsDyn"; version="0.9-44"; sha256="09vxp2zir0vidzfm57j4cgkigsiyqwvr6ssy15ydfjxha30523a7"; depends=[foreach forecast MASS Matrix mgcv mnormt nnet tseries tseriesChaos urca vars]; }; + tsDyn = derive2 { name="tsDyn"; version="0.9-46"; sha256="1cq36qxpimiwlzjnnjqj5rjb3l1h684day4kch99vza1v62h1lkv"; depends=[foreach forecast MASS Matrix mgcv mnormt nnet tseries tseriesChaos urca vars]; }; tsModel = derive2 { name="tsModel"; version="0.6"; sha256="0mkmhzj4g38ngzfcfx0zsiqpxs2qpw82kgmm1b8gl671s4rz00zs"; depends=[]; }; tsPI = derive2 { name="tsPI"; version="1.0.2"; sha256="0lw4s7gxn4xldsk5f3dz27bb9jywa14195703b5q1497h9j966gk"; depends=[KFAS]; }; tsSelect = derive2 { name="tsSelect"; version="0.1.8"; sha256="0ysijzhhwaj5n7h50jacshnla6d0h61q0f6lj19ic0lwvlz4yazy"; depends=[forecast]; }; @@ -11477,21 +11713,23 @@ in with self; { tsc = derive2 { name="tsc"; version="1.0-3"; sha256="1acsdkxizlkix1sskwqv2a80rshw6f14zvcsjhrmmdfd4bmwh36y"; depends=[]; }; tscount = derive2 { name="tscount"; version="1.4.1"; sha256="0bnzv06wxc1kzjlysljndsjimjsn3g8v6s1vbics1cwcs5jkjwr4"; depends=[ltsa]; }; tsdecomp = derive2 { name="tsdecomp"; version="0.2"; sha256="1wy37gjp49dr60s4zhwv19iv3mzr1fjz5yilqmqgy78j5d45ns15"; depends=[]; }; - tsdf = derive2 { name="tsdf"; version="1.1-2"; sha256="11yapq3ml9clj0sqwibraj3wd7pikh2qrhq4df4m45ib6fiaa3jc"; depends=[gsDesign]; }; + tsdf = derive2 { name="tsdf"; version="1.1-4"; sha256="0kjcfh7vrnyg2aqzr5kkzdccriy2h5x1byzhdhvyb68fi4fjf4dh"; depends=[gsDesign]; }; tsdisagg2 = derive2 { name="tsdisagg2"; version="0.1.0"; sha256="1vjypf9d4rdprpgxfsgpccn412kvar59v341ridq2hcdp7hfb70s"; depends=[]; }; tsensembler = derive2 { name="tsensembler"; version="0.0.2"; sha256="0yhm6vayh1yjrvki04f86xvxmrl9pcj92z0gzwyh0j1cqp48sh79"; depends=[Cubist earth gbm glmnet kernlab nnet pls ranger RcppRoll xts zoo]; }; - tseries = derive2 { name="tseries"; version="0.10-42"; sha256="1i26ankmbc96w6abqhxhbvhd12m87f2jfb5xrbl01iqmhy2pjzw2"; depends=[quadprog quantmod zoo]; }; + tseries = derive2 { name="tseries"; version="0.10-43"; sha256="1yjxhj7l1p2przczl6frggfcr5iwda9lbcsmh0y75gbbbps14yf2"; depends=[quadprog quantmod zoo]; }; tseriesChaos = derive2 { name="tseriesChaos"; version="0.1-13"; sha256="0f2hycxyvcaj3s1lmva1qy46xr6qi43k8fvnm4md5qj8jp2zkazg"; depends=[deSolve]; }; tseriesEntropy = derive2 { name="tseriesEntropy"; version="0.6-0"; sha256="04clfkpkiy5p5nxcq59c7f4v1llj1d95lvck23h1px50lvb993fv"; depends=[cubature ks]; }; tsfa = derive2 { name="tsfa"; version="2014.10-1"; sha256="0gkgl55v08dr288nf8r769f96qri7qbi5src7y6azrykb37nz6iz"; depends=[dse EvalEst GPArotation setRNG tfplot tframe]; }; tsgui = derive2 { name="tsgui"; version="0.0.3"; sha256="16cx68gq2f63wx7mhbv0aq6pr71wfbc035kjbjjsfrbagaq4ib13"; depends=[RandomFieldsUtils tcltk2 tkrplot]; }; tsiR = derive2 { name="tsiR"; version="0.3.0"; sha256="1brlwsbs4rac8z6cf1q3xm1apdi4ban5hj7p3qvz2yx810gbxp1d"; depends=[ggplot2 kernlab reshape2]; }; + tsibble = derive2 { name="tsibble"; version="0.1.2"; sha256="17khhah6vpb4ld3yvvbczx9vkdnilazgdifh0ldnbdw5131bsr34"; depends=[dplyr lubridate pillar purrr Rcpp rlang tibble tidyr tidyselect]; }; tsintermittent = derive2 { name="tsintermittent"; version="1.9"; sha256="1mrb6yrsjwj6j40n97sgg42ddvwhjnaiq9k7ka249bbq01gf2975"; depends=[MAPA]; }; tsna = derive2 { name="tsna"; version="0.2.0"; sha256="09q01jzj1rnv2f2jf7djnq5xrkp7lvykdbf4bfswsy0f95j0asx2"; depends=[network networkDynamic statnet_common]; }; tsne = derive2 { name="tsne"; version="0.1-3"; sha256="0s8cv2pndkddq62rzlgzgfdjp1vjv5hz5i5957sllnb97vbzbzb6"; depends=[]; }; tsoutliers = derive2 { name="tsoutliers"; version="0.6-6"; sha256="0q4lkqasnsps8lzpiyk074nfhv29sbma080729c8l3ba1sa9pmyn"; depends=[forecast KFKSDS stsm]; }; tspmeta = derive2 { name="tspmeta"; version="1.2"; sha256="028jbbd0pwpbjq4r6jcc1h0p7c4djcb9d2mvgzw1rmpphaxjvrkd"; depends=[BBmisc checkmate fpc ggplot2 MASS splancs stringr TSP vegan]; }; tsqn = derive2 { name="tsqn"; version="1.0.0"; sha256="1iv1wwa6a9824dbgfk5a609szppc3a8j250z74hb8csjvwwx9qq9"; depends=[fracdiff MASS robustbase]; }; + tstools = derive2 { name="tstools"; version="0.3.5.1"; sha256="11n56jd4hap8bl8dicdy1zvf916jc66nkg9v2i31n6n42v5dw699"; depends=[data_table jsonlite xts zoo]; }; tswge = derive2 { name="tswge"; version="1.0.0"; sha256="0wj0kyb1dcwfn8wjp7skgcflc48cr4va0i0jg8x970658if7z6fz"; depends=[astsa MASS PolynomF signal waveslim]; }; tsxtreme = derive2 { name="tsxtreme"; version="0.3.1"; sha256="0cfska93ws5x11pslcdhf5rrshxzh6ddlgmfkl9zlci2rqdbwz35"; depends=[evd MASS mvtnorm]; }; ttScreening = derive2 { name="ttScreening"; version="1.5"; sha256="0qn8lkvgvqpmm368fwpqkm09yaj9mw42mjlikyiwpv2wrgbpmg9n"; depends=[corpcor limma MASS matrixStats sva]; }; @@ -11500,10 +11738,10 @@ in with self; { tttplot = derive2 { name="tttplot"; version="1.1.1"; sha256="0rmgp1888y07w0h8kwq1azpr6bysjq4pyjf6ygpra75jj4563wx9"; depends=[]; }; ttutils = derive2 { name="ttutils"; version="1.0-1"; sha256="18mk30070mcplybg320vjbk9v5flxnbqi5gx0yyr1z6ymjmnrxbc"; depends=[]; }; ttwa = derive2 { name="ttwa"; version="0.8.5.1"; sha256="1lhypcwssq0dspizvln3w4dg16ad6mz8cj4w34c5vsrayqid7fyn"; depends=[data_table]; }; - tuber = derive2 { name="tuber"; version="0.9.2"; sha256="1a26p0iqdpklda7w94nfisv75kniq3k10n8pfhfxd8jc7y09xcv6"; depends=[httr plyr]; }; + tuber = derive2 { name="tuber"; version="0.9.4"; sha256="0fa4mpvm4mlscnhfbgrj6zxfjf26scv08nihnfi0k3f67jiwdlg5"; depends=[httr plyr]; }; tubern = derive2 { name="tubern"; version="0.1.0"; sha256="0wpn4aig6r1kpncrgrqra4kr0f07rdq7z4p2k0h28f7kww6l52vv"; depends=[httr jsonlite]; }; tuckerR_mmgg = derive2 { name="tuckerR.mmgg"; version="1.5.0"; sha256="0pxsnvzh5gy5dsdsqsmq8hkr597dnnv60b5dw7bqw493lavk2ccm"; depends=[]; }; - tufte = derive2 { name="tufte"; version="0.2"; sha256="0yh5xdxapqpf5hgdn8c2jkk63817l2w6bxavw8457r89rnj1022p"; depends=[htmltools knitr rmarkdown]; }; + tufte = derive2 { name="tufte"; version="0.3"; sha256="1fpv9ilf8ajynz38ny0abfnq20xzpgwbxaxj8ijwy8viki893bd0"; depends=[htmltools knitr rmarkdown xfun]; }; tufterhandout = derive2 { name="tufterhandout"; version="1.2.1"; sha256="04fvvbx69a28nk7i4wz5ynamz1yvsa2ibz542r1xaq1ikk0ywqbw"; depends=[knitr rmarkdown]; }; tukeytrend = derive2 { name="tukeytrend"; version="0.4"; sha256="14jyv8xb7ghbprn9gm5dlkry868i14ga63pfi78dhmq67i43s70x"; depends=[lme4 Matrix mgcv multcomp nlme pbkrtest]; }; tumblR = derive2 { name="tumblR"; version="1.1"; sha256="0gl6q6rff9bp21gvi3bz8kmwbhimxqrv1mmzwshl1ys9r7d4dvps"; depends=[httr RCurl RJSONIO stringr]; }; @@ -11514,12 +11752,12 @@ in with self; { turfR = derive2 { name="turfR"; version="0.8-7"; sha256="007jmkppfv1x4zzvvd65fhg5k15ybjhsya2zfjgwm77wm34y81ca"; depends=[dplyr]; }; turner = derive2 { name="turner"; version="0.1.7"; sha256="1xckb750hbfmzhvabj0lzrsscib7g187b44ag831z58zvawwh772"; depends=[tester]; }; tutorial = derive2 { name="tutorial"; version="0.4.3"; sha256="0sxdlpw0w4azlaxdlk36ycrric6pbj2zi4nyv26pgsp0cr1hrx6r"; depends=[base64enc knitr markdown rjson]; }; - tvR = derive2 { name="tvR"; version="0.1.0"; sha256="1r1mr7zbvv81rld43b1q8c7yaylqilny3fwsyykvcm1qjgg0myr2"; depends=[imager Matrix Rcpp RcppArmadillo]; }; + tvR = derive2 { name="tvR"; version="0.1.1"; sha256="1amcaala3lqzj4cv51hdqd7xydvx4fjs7hprc0n0b1b6xv7md1v3"; depends=[imager Matrix Rcpp RcppArmadillo Rdpack]; }; tvReg = derive2 { name="tvReg"; version="0.2.1"; sha256="10ad9475i6q1phrjc2hh1h9si14qv9z27yn0n31cnm9fqnprdqn8"; depends=[bvarsv MASS Matrix systemfit vars]; }; tvd = derive2 { name="tvd"; version="0.1.0"; sha256="07al7gpm81a16q5nppsyc5rhv6zzkcvw72isx955b1q189v073aw"; depends=[Rcpp]; }; tvm = derive2 { name="tvm"; version="0.3.0"; sha256="1iv0qrks1zdiq8jaqr1h46snq8wc3g3q017hxc8zc6fqnsz1whf6"; depends=[ggplot2 reshape2]; }; twang = derive2 { name="twang"; version="1.5"; sha256="1sp1vb6l0mwpy9b9my5d3spc0q0zs7xg4dkmi4cl7hy7m9xy1dbk"; depends=[gbm lattice latticeExtra survey xtable]; }; - tweedie = derive2 { name="tweedie"; version="2.3.1"; sha256="0jp2cm37xcclfy9b5h9qrz2g1636n1yb5flg89h6m6x2vamgx25a"; depends=[]; }; + tweedie = derive2 { name="tweedie"; version="2.3.2"; sha256="10fv998qjxsyx0h94fi0xbh6xbf24nwgh254n9zfnmix9vk2cqls"; depends=[]; }; tweenr = derive2 { name="tweenr"; version="0.1.5"; sha256="06h0vhxlljmvxg4a62sqrq53lpbvl5w19dqcpyw1jqvrb5agidnq"; depends=[Rcpp]; }; tweet2r = derive2 { name="tweet2r"; version="1.0"; sha256="0v7xshk389k3aws72ww9kqc2ycw6l6q9xmhps47g3bdl64jy8bay"; depends=[ggmap ggplot2 maptools plyr rgdal ROAuth RPostgreSQL RSQLite sp spacetime spatstat splancs streamR]; }; twfy = derive2 { name="twfy"; version="0.1.0"; sha256="14xxl9y8iagnn5jd06k6jyy4wk7crm64svz8h0zmzcvg47k8bwc7"; depends=[httr jsonlite]; }; @@ -11533,20 +11771,20 @@ in with self; { uGMAR = derive2 { name="uGMAR"; version="1.0.2"; sha256="09k3g0rnaf7gkczgak8biajnql5fjv32dv59y0ncd8zvv0d9i77q"; depends=[Brobdingnag]; }; uHMM = derive2 { name="uHMM"; version="1.0"; sha256="1516ipadxi7rc1dbinr5rva2fbcr5i2zg3rlli5wy7r6naf8fzzl"; depends=[chron class cluster clValid corrplot FactoMineR HMM tcltk2 tkrplot]; }; uaparserjs = derive2 { name="uaparserjs"; version="0.1.0"; sha256="1zhz39jrvi64sj0wvwkm4y8gakfp6kz1knw4wn08kk4fa9ymyjvq"; depends=[dplyr purrr V8]; }; - uavRmp = derive2 { name="uavRmp"; version="0.5.1"; sha256="16a1azgva231rkq45xrgs6afa0yaxd0grcqs95phdji6fppkgc3l"; depends=[data_table devtools gdalUtils geosphere htmltools htmlwidgets log4r maptools raster rgdal rgeos roxygen2 sf sp spatial_tools stringr zoo]; }; + uavRmp = derive2 { name="uavRmp"; version="0.5.3"; sha256="05annx1vzpssxf5ycrgk2dizgl83zbwvl2x3bj8r5d8w5lvlpwrb"; depends=[brew data_table devtools gdalUtils geosphere htmltools htmlwidgets log4r maptools raster rgdal rgeos roxygen2 sf sp spatial_tools stringr zoo]; }; ubeR = derive2 { name="ubeR"; version="0.1.4"; sha256="1ilclna04hd1ykcp2b3gcj0v4qznwx0d24yavxnf2yh5d91wr6z2"; depends=[dplyr ggmap ggplot2 ggthemes googleway httpuv httr jsonlite]; }; ucbthesis = derive2 { name="ucbthesis"; version="1.0"; sha256="0l855if3a7862lxlnkbx52qa617mby634sbb2gkprj21rwd7lcbp"; depends=[knitr stringr]; }; ucminf = derive2 { name="ucminf"; version="1.1-4"; sha256="01vggwg1w71k98qs6fhb0x1843vi322mf4g3hbclks94kcpkisx2"; depends=[]; }; udapi = derive2 { name="udapi"; version="0.1.0"; sha256="0hwnrx9qkazja288m6irmwwybiys9npk6sk60acjdczsfrn1hvl0"; depends=[curl httr]; }; - udpipe = derive2 { name="udpipe"; version="0.2"; sha256="0qa8451x6918ihwz2bqqygq9dznm3ax1wgg655xg2pcg62kja91i"; depends=[data_table Matrix Rcpp]; }; + udpipe = derive2 { name="udpipe"; version="0.4"; sha256="00n4779g7idc29m7j32plqc4cnhrhhh28zmhd3lp74sxzfhi2vkb"; depends=[data_table Matrix Rcpp]; }; udunits2 = derive2 { name="udunits2"; version="0.13"; sha256="0yav7rm2afcx67xqrknybxgz7x63w78zyxa0xifvc0k2gz0d6mfi"; depends=[]; }; - uiucthemes = derive2 { name="uiucthemes"; version="0.1.1"; sha256="0d1agg94z0qy6k4pbv01p1xb0zh42gkjl5i9kbqblplnk2swkzyi"; depends=[rmarkdown]; }; + uiucthemes = derive2 { name="uiucthemes"; version="0.2.0"; sha256="1z1wx89b2d7z1a2zc4ai05v9slfpidja8f561jcsrcdi9hz2yp81"; depends=[rmarkdown]; }; ukbabynames = derive2 { name="ukbabynames"; version="0.1.1"; sha256="0vrwcf3hixd40ag6kb289anq2ys2k6vdhhsrjbizvndkyn8sr0r0"; depends=[]; }; - ukbtools = derive2 { name="ukbtools"; version="0.10.0"; sha256="1vlkciq3jip00ycnjqmdkbhi1wawjn7nnb10apkp5lga6xqvldca"; depends=[dplyr ggplot2 magrittr plyr purrr readr scales tibble tidyr XML]; }; + ukbtools = derive2 { name="ukbtools"; version="0.10.1"; sha256="1q1pp15lmia1cadiyqpbk532yy8r8hfskglybpkrxrjq2i1sdm4j"; depends=[dplyr ggplot2 magrittr plyr purrr readr scales stringr tibble tidyr XML]; }; ukds = derive2 { name="ukds"; version="0.1.0"; sha256="00lgr9jy57bwa8p38mqcf4fk29g2w2wqk3pwf9av6f5lapzzgc94"; depends=[magrittr rio RSelenium stringr]; }; ukgasapi = derive2 { name="ukgasapi"; version="0.13"; sha256="0bnblha96ldbxj0nqhcj26d1dk2xm6nkjqqval1jlc2pki20mr9n"; depends=[RCurl XML]; }; ump = derive2 { name="ump"; version="0.5-8"; sha256="1sg226caq9y41cwl7wr5s9z3bpq2j5p6rj6fy2pasbzimgzw0byx"; depends=[]; }; - umx = derive2 { name="umx"; version="1.9.1"; sha256="0s1mma8y5h48lc1sg1iv0r667sf992nfcl88kv7ijmi5aqxgi2mm"; depends=[DiagrammeR knitr MASS Matrix mvtnorm nlme numDeriv OpenMx polycor R2HTML RCurl sfsmisc xtable]; }; + umx = derive2 { name="umx"; version="2.0.2"; sha256="1665h1yjs28zfpy7ziy0qnv8chm5nb5fcca1jj0cfbsspzndm24p"; depends=[cowplot DiagrammeR ggplot2 knitr MASS Matrix mvtnorm nlme numDeriv OpenMx polycor R2HTML RCurl sfsmisc xtable]; }; unbalanced = derive2 { name="unbalanced"; version="2.0"; sha256="18hy9nnq42s1viij0a5i9wzrrfmmbf7y3yzjzymz2wnrx4f2pqwv"; depends=[doParallel FNN foreach mlr RANN]; }; unbalhaar = derive2 { name="unbalhaar"; version="2.0"; sha256="0v6bkin1cakwl9lmv49s0jnccl9d6vdslbi1a7kfvmr5dgy760hs"; depends=[]; }; uncmbb = derive2 { name="uncmbb"; version="0.1.0"; sha256="0gkd475k4qbnfn3cgh8w4fq4g3i2fn3dlb8n89ih3xdk5ac4ns73"; depends=[]; }; @@ -11558,18 +11796,17 @@ in with self; { unifDAG = derive2 { name="unifDAG"; version="1.0.1"; sha256="1zf2pclddswrssil7ikq75449ks3070jxkzy2lmggq9gyipdypps"; depends=[gmp graph]; }; uniftest = derive2 { name="uniftest"; version="1.1"; sha256="0a37m7l3lc6rznx10w9h9krnn5paim2i2wvw47ckwag7bv0d4pm4"; depends=[orthopolynom]; }; uniqtag = derive2 { name="uniqtag"; version="1.0"; sha256="025q71mzdv3n1jw1fa37bbw8116msnfzcia01p1864si04ch5358"; depends=[]; }; - uniqueAtomMat = derive2 { name="uniqueAtomMat"; version="0.1-3-2"; sha256="1msk9wzxhqdq6737b5xay1nqyvppb2yjcpnff2l7c7jf4xrlw0pp"; depends=[]; }; - unitedR = derive2 { name="unitedR"; version="0.2"; sha256="0glcyji0cypb2687cvyra0zzlzbq0md7qb60abgi0199hf51q3dj"; depends=[plyr]; }; + unitedR = derive2 { name="unitedR"; version="0.3.1"; sha256="06plbhjbn1gflpxarn21knhiwfr02vxprak9qcghl30fkkymd02r"; depends=[plyr]; }; unitizer = derive2 { name="unitizer"; version="1.4.5"; sha256="1ml1x9jvwmh8mg2w2j2g8ffibw6a1ihj0aih11zzf4gjhs0w5p9d"; depends=[crayon diffobj]; }; - units = derive2 { name="units"; version="0.4-6"; sha256="1vx11yrmpk61gkhafbhhl97c8r4h9zvz9pd257daa8f2gsdkqf6v"; depends=[udunits2]; }; + units = derive2 { name="units"; version="0.5-1"; sha256="07hbhgk7vpfb94gyk028rrqy793aa8sgykkqm3k2fgb23nwcd6vl"; depends=[udunits2]; }; unittest = derive2 { name="unittest"; version="1.3-0"; sha256="0haf3s3pc5bhsm6y5njghr9w8ifsjxczm5r7g0ynylwzvd019n8b"; depends=[]; }; - univOutl = derive2 { name="univOutl"; version="0.1-3"; sha256="0p6x38szag3ngk48rz3vlsph5y6yd2vckpkqfd9h7yz2ziyyy5m6"; depends=[Hmisc robustbase]; }; + univOutl = derive2 { name="univOutl"; version="0.1-4"; sha256="041cc1jn95zababc4i84c378i204zkn865k2vd7mk1piwm3qkrj5"; depends=[Hmisc robustbase]; }; unix = derive2 { name="unix"; version="1.3"; sha256="1l5w22j0h3qzya13wx7y8lx2baw496vcmn39l2y8r1v38as9dybc"; depends=[]; }; unjoin = derive2 { name="unjoin"; version="0.0.3"; sha256="08vjgl4dnh9kycrvdq5ngf57fy61n0nc582bi4znv06pq696rkwp"; depends=[dplyr rlang tibble]; }; unmarked = derive2 { name="unmarked"; version="0.12-2"; sha256="1ql8l7kc8py7zand164w3yszqbmwyxvrkjvr10l4hx2mkcnvxzx0"; depends=[lattice plyr raster Rcpp RcppArmadillo reshape]; }; - unpivotr = derive2 { name="unpivotr"; version="0.2.1"; sha256="0gijbx2ziyfh9wl0a8dxnmm31961sdd9hi0i09frkqhxmcch45fx"; depends=[data_table dplyr dtplyr lazyeval magrittr purrr tibble tidyr xml2]; }; + unpivotr = derive2 { name="unpivotr"; version="0.3.1"; sha256="184xpnvcc8k0nxqad3q9qsj47g7icw98sm9bnx8fz4ga4zppxn4p"; depends=[data_table dplyr dtplyr magrittr purrr rlang tibble tidyr xml2]; }; unrepx = derive2 { name="unrepx"; version="1.0"; sha256="1dzvwpza60y9p7kz1f0bm20wid5jyxx9pma4w41az9shq5kkr0aj"; depends=[]; }; - unrtf = derive2 { name="unrtf"; version="1.1"; sha256="135ry73xdjwqibkj56j3js2pmjpdy8kk5xxs6ncs64yk733kz2jh"; depends=[sys]; }; + unrtf = derive2 { name="unrtf"; version="1.2"; sha256="11q2p6cnf1pqsh8sys45gb4xf713bh693lm59d8nw09kcbm23210"; depends=[sys]; }; unsystation = derive2 { name="unsystation"; version="0.1.1"; sha256="0w5llr2kyv7g5fx5yvlyqwj4da5k5fq1f2y70c9pjdzrny9lpz4q"; depends=[doParallel foreach iterators Rcpp RcppArmadillo]; }; untb = derive2 { name="untb"; version="1.7-2"; sha256="1ha0xj94sz1r325qb4sb5hla9hw1gbqr76703vk792x9696skhji"; depends=[Brobdingnag partitions polynom]; }; unvotes = derive2 { name="unvotes"; version="0.2.0"; sha256="0wanvivwm1nmqadq2vapg27kasnjnr0a4np2kw54wj9pg21izqic"; depends=[]; }; @@ -11578,21 +11815,22 @@ in with self; { upmfit = derive2 { name="upmfit"; version="0.1.0"; sha256="0f0rk606v17abgw3mwlwihl6fsxprp44h2xbhv1675i18i36vbgx"; depends=[mcmcplots R2jags]; }; uptasticsearch = derive2 { name="uptasticsearch"; version="0.1.0"; sha256="0kr9lmfp5fa3rcmk0s56pgr4h2pabic17m9yv2sljg7cvx50iss6"; depends=[data_table futile_logger httr jsonlite purrr stringr uuid]; }; uptimeRobot = derive2 { name="uptimeRobot"; version="1.0.0"; sha256="1sbr0vs6jqcyxjbs7q45bsfdnp3bc59phw0h3fwajqq1cxjgzdww"; depends=[plyr RCurl rjson]; }; + upwaver = derive2 { name="upwaver"; version="1.0.1"; sha256="0pl5r1rh91s8i74zrsrblp6mjn371a2lp01f5d37d1vnjxc3dn9n"; depends=[assertthat httr rjson XLConnect]; }; uqr = derive2 { name="uqr"; version="1.0.0"; sha256="0f7isjfb5almp1zypxzw3lfkygkcixmg0xdsw0zznf61r6qhbqyr"; depends=[gtools Hmisc]; }; urca = derive2 { name="urca"; version="1.3-0"; sha256="1akaqwf3fvvvx4sgfn641fd4sj51s0701pvfl6s5hnz2k0iwh732"; depends=[nlme]; }; urlshorteneR = derive2 { name="urlshorteneR"; version="0.9.2"; sha256="1y5n1rn2c7yj5ncxfnsrj9lvaam2j3vvx8ld1vqyjay1r8flzifd"; depends=[httr jsonlite stringr]; }; - urltools = derive2 { name="urltools"; version="1.6.0"; sha256="1vyv88x5l0hr4jhn7sics11g8j6817gn4yjpk58b40ynija42kkb"; depends=[Rcpp triebeard]; }; + urltools = derive2 { name="urltools"; version="1.7.0"; sha256="0kxv54j4rf8jwyfv3z3plyb9vycwi0m1jv7z2nxnm3729p72y9xl"; depends=[Rcpp triebeard]; }; uroot = derive2 { name="uroot"; version="2.0-9"; sha256="0nxc8d4v9v5z3wbnj325iq2yrh0mipqgg2rn8pp2jyyq9vb1cxlv"; depends=[]; }; usdm = derive2 { name="usdm"; version="1.1-18"; sha256="1sis47fri2lrbx2ll5ps7bvycjqhncnia800izf11szgayim5lrv"; depends=[raster sp]; }; usedist = derive2 { name="usedist"; version="0.1.0"; sha256="17mldp0888ig2xc8cp1nhldj5g3srwmbx3mfcnzz21n1fz31jkmg"; depends=[]; }; useful = derive2 { name="useful"; version="1.2.3"; sha256="016fwnjrnq44m71jmiy8cpzncja77pii2ag2ir85jdk4fzgckn7l"; depends=[dplyr ggplot2 magrittr Matrix plyr purrr scales]; }; userfriendlyscience = derive2 { name="userfriendlyscience"; version="0.7.0"; sha256="14wdy74mj9rzlpmrsy3b4fda5f2sx078w1k1lgahz0yra3bypl3k"; depends=[BiasedUrn car data_tree DiagrammeR digest diptest fBasics GGally ggplot2 ggrepel ggridges GPArotation gridExtra gtable knitr lavaan lme4 MASS MBESS minpack_lm pander plyr psych pwr RColorBrewer rio scales SCRT SuppDists viridis XML xtable]; }; - usethis = derive2 { name="usethis"; version="1.1.0"; sha256="1amx6qd8mksqr38y6j3aj1xck3kpq0fhc37w3ygyc19pasqfabpj"; depends=[clipr clisymbols crayon desc digest gh git2r rmarkdown rprojroot rstudioapi whisker withr]; }; + usethis = derive2 { name="usethis"; version="1.2.0"; sha256="0y8nw2kcwnygkwxbdshf9czlf6064fs4h54hvr3j1nbv4a479i68"; depends=[backports clipr clisymbols crayon curl desc gh git2r httr rematch2 rmarkdown rprojroot rstudioapi styler whisker]; }; uskewFactors = derive2 { name="uskewFactors"; version="2.0"; sha256="0ndi5987ak8sa7krgiglsibfg0k7z9j8fg47hg1m8ar0sq4r1yj6"; depends=[MASS MCMCpack mvtnorm tmvtnorm]; }; usl = derive2 { name="usl"; version="1.8.0"; sha256="04w7p9i08a51smgg11kh4hablic5rjmr5hndrnlg49j5h20i7w1v"; depends=[nlsr]; }; usmap = derive2 { name="usmap"; version="0.2.1"; sha256="0ilg8fzrxpljdly8xkniirqa3lw74kfark75pv071aa4l6xkiwlg"; depends=[]; }; ustyc = derive2 { name="ustyc"; version="1.0.0"; sha256="1267bng2dz3229cbbq47w22i2yq2ydpw26ngqa1nbi3ma6hwqsv4"; depends=[plyr XML]; }; - utf8 = derive2 { name="utf8"; version="1.1.0"; sha256="0kyw8irdjbhq7l7kd8cgvwszr215i5akm68jxz1h1645ab2f52ka"; depends=[]; }; + utf8 = derive2 { name="utf8"; version="1.1.3"; sha256="03s4j6059q0nly68vpk6wy3p3f5ypakw93fj35kzd82b4z1r9cs3"; depends=[]; }; utf8latex = derive2 { name="utf8latex"; version="1.0.4"; sha256="12isrl056h7y7nr7wk52dnvf3frcp66qqy7si869ark2aj81f959"; depends=[]; }; utility = derive2 { name="utility"; version="1.4.2"; sha256="0q08yc0sxbcjhsr0nkgc2pyxkd93zwlbf0jyq21cf535mj4036gq"; depends=[]; }; utilsIPEA = derive2 { name="utilsIPEA"; version="0.0.5"; sha256="1kllm94c23pb176nazcfgsv38aawbzdwqdhyxx1c1n1jlsls2zk6"; depends=[data_table dplyr RCurl stringdist stringr]; }; @@ -11603,7 +11841,7 @@ in with self; { vaersvax = derive2 { name="vaersvax"; version="1.0.4"; sha256="15znkwbhr624qgwlcrdhaxpdfl85ym845mr2sy8b016d3ngz7n94"; depends=[]; }; vagalumeR = derive2 { name="vagalumeR"; version="0.1.1"; sha256="1l1p63yhwqvkh8kgqii9n96vdm86jfc64nrinjp5l7jhx99sn013"; depends=[httr jsonlite plyr stringr]; }; valaddin = derive2 { name="valaddin"; version="0.1.2"; sha256="0j1c3g9gn2j0manz3jjh58cnl7b1rfwm9494xqrfqpia8948p9vq"; depends=[lazyeval purrr]; }; - validaRA = derive2 { name="validaRA"; version="0.1.1"; sha256="02dm62fiyvy52asmfp0qjjnbr5xhsy8yx37sly1wb5w1bvgqkd1n"; depends=[BH bit64 data_table Rcpp rmarkdown stringr]; }; + valection = derive2 { name="valection"; version="1.0.0"; sha256="0104zcg3cw57ksgmb321hnyv095mn3frxci9vikj1smwarpnrpzc"; depends=[testthat]; }; validann = derive2 { name="validann"; version="1.2.1"; sha256="00c0hkjiv8n7mksx6sknb4xkkivxr1ml31k697csv4imwrk09dy5"; depends=[moments]; }; validate = derive2 { name="validate"; version="0.2.0"; sha256="178paxywwiaa45pqhknpw2k6f08b35nlnhwvqv2d1d289fz4f6qh"; depends=[settings yaml]; }; validateRS = derive2 { name="validateRS"; version="1.0.0"; sha256="1ivw9ddr6z2wrsqvhbn87p5pikhkxlz8p45pb5nq13dvs359vkww"; depends=[data_table reshape2 triangle truncnorm]; }; @@ -11611,10 +11849,9 @@ in with self; { validatetools = derive2 { name="validatetools"; version="0.4.1"; sha256="1ivwgva37j26csvp4w3w7d10yq6myqdg6gcgxrl9z8j3gldnzv7p"; depends=[lpSolveAPI validate]; }; valorate = derive2 { name="valorate"; version="1.0-1"; sha256="06vczszpkipsxfs7h6ld33vvxb5ci62rwg3cglwy3lcfifhbnsfi"; depends=[survival]; }; valottery = derive2 { name="valottery"; version="0.0.1"; sha256="0rlv8agm9ng4jcb9ixqifh7kjczvkx7047brq8yf9kg7rb8mzgpz"; depends=[]; }; - valr = derive2 { name="valr"; version="0.3.1"; sha256="1f98qr204fv5dngm6qricx4mnrfds8nlpnszxidk4bnvhc23xq93"; depends=[BH broom dplyr ggplot2 Rcpp readr rlang stringr tibble]; }; - valuer = derive2 { name="valuer"; version="1.1.1"; sha256="1pvzhx5irxww6vb8j4nsanlzgwaa4z96vw4l97h6l27h1403gdkb"; depends=[ggplot2 orthopolynom R6 Rcpp RcppEigen timeDate yuima]; }; + valr = derive2 { name="valr"; version="0.4.0"; sha256="1km828lif5nh15fxc3kbk3xp14gmsd6f3n0g5ml9zbdimh9n990z"; depends=[BH bindrcpp broom dplyr ggplot2 plogr Rcpp readr rlang stringr tibble]; }; + valuer = derive2 { name="valuer"; version="1.1.2"; sha256="0mbwzsvy34ppngyxdzpd9w1r4f00cik4maqab9kpiflrrv9xdp78"; depends=[ggplot2 orthopolynom R6 Rcpp RcppEigen timeDate yuima]; }; vanddraabe = derive2 { name="vanddraabe"; version="1.0.0"; sha256="0hnfkwrrk50a5rica3lk2d52qi77xya3aspf13g0zygbyvv7ls72"; depends=[bio3d cowplot fastcluster ggplot2 openxlsx reshape2 scales]; }; - varComp = derive2 { name="varComp"; version="0.2-0"; sha256="05a8f4r16ryy81has6k68p6bybg8khbqlbfm5b12ba8fdfy9lj87"; depends=[CompQuadForm MASS Matrix mvtnorm nlme quadprog RLRsim SPA3G]; }; varSel = derive2 { name="varSel"; version="0.1"; sha256="0ddj3swfxzchs75kfi6h25h3c33hpapnd5kcwcijnqhlh902b1r0"; depends=[]; }; varSelRF = derive2 { name="varSelRF"; version="0.7-8"; sha256="0h49rl1j13yfh97rsfsyh9s2c4wajny4rzms2qw77d0cavxqg53i"; depends=[randomForest]; }; varband = derive2 { name="varband"; version="0.9.0"; sha256="16z66rx7xq5zan8pnw100c9r5syw1ml4hgzi9mch52aia23v21p9"; depends=[Rcpp RcppArmadillo]; }; @@ -11628,27 +11865,27 @@ in with self; { vars = derive2 { name="vars"; version="1.5-2"; sha256="1q45z5b07ww4nafrvjl48z0w1zpck3cd8fssgwgh4pw84id3dyjh"; depends=[lmtest MASS sandwich strucchange urca]; }; vbdm = derive2 { name="vbdm"; version="0.0.4"; sha256="1rbff0whhbfcf6q5wpr3ws1n4n2kcr79yifcni12vxg69a3v6dd3"; depends=[]; }; vbsr = derive2 { name="vbsr"; version="0.0.5"; sha256="1avskbxxyinjjdga4rnghcfvd4sypv4m39ysfaij5avvmi89bx3b"; depends=[]; }; - vcd = derive2 { name="vcd"; version="1.4-3"; sha256="05azric2w8mrsdk7y0484cjygcgcmbp96q2v500wvn91fj98kkhp"; depends=[colorspace lmtest MASS]; }; + vcd = derive2 { name="vcd"; version="1.4-4"; sha256="1lp99h0wvsc61l1dgcqjxdrcgpgw88ak430cdsv43kmm43qssqd5"; depends=[colorspace lmtest MASS]; }; vcdExtra = derive2 { name="vcdExtra"; version="0.7-1"; sha256="163x9hhvhgdmrqbcig7b120lk63svy0y652scbrcb11f85zrgb0c"; depends=[ca gnm MASS vcd]; }; - vcfR = derive2 { name="vcfR"; version="1.5.0"; sha256="08hsfk69j2xafmf98izhnimxcda12fsqdvy94xhwy811sx9d7mvw"; depends=[ape dplyr magrittr memuse pinfsc50 Rcpp stringr tidyr vegan viridisLite]; }; + vcfR = derive2 { name="vcfR"; version="1.7.0"; sha256="1vx4s5z8h8mk8gqra2a5mkapz5xv1im76klq8qkpvj6ic4wcwsxs"; depends=[ape dplyr magrittr memuse pinfsc50 Rcpp stringr tibble tidyr vegan viridisLite]; }; vcov = derive2 { name="vcov"; version="0.0.1"; sha256="1w89mr8dk6436bxap28rszajgm9k7sjfqsr1i4p68dlhw8zk4yq1"; depends=[]; }; - vcrpart = derive2 { name="vcrpart"; version="1.0-1"; sha256="0bmr17f6h3hnis7qvssfcwf1m5x3d7piv98s82l5jp83jfpy6z1v"; depends=[formula_tools nlme numDeriv partykit rpart sandwich strucchange ucminf zoo]; }; + vcrpart = derive2 { name="vcrpart"; version="1.0-2"; sha256="1xfvsxgyf39d2qxnm40nzkqp7q12y8nbpn9h154n876zxxfs7gh1"; depends=[formula_tools nlme numDeriv partykit rpart sandwich strucchange ucminf zoo]; }; vdg = derive2 { name="vdg"; version="1.2.0"; sha256="1hi5d14nh9q784sbdk018awrawh9f1aix0wl26x7n0xb4707rcmy"; depends=[ggplot2 gridExtra proxy quantreg]; }; - vdiffr = derive2 { name="vdiffr"; version="0.2.1"; sha256="0dkycszm61s2nqvxffsljykgwnvklj18kg8rp206v9gc0i3fd2wz"; depends=[devtools fontquiver gdtools glue htmlwidgets purrr R6 Rcpp rlang shiny svglite testthat xml2]; }; + vdiffr = derive2 { name="vdiffr"; version="0.2.2"; sha256="11annh6dl4xyky4c6jx0jhvwpfmqfha57666qzs225sj30xq84dc"; depends=[devtools fontquiver gdtools glue htmlwidgets purrr R6 Rcpp rlang shiny svglite testthat xml2]; }; vdmR = derive2 { name="vdmR"; version="0.2.5"; sha256="1v96khvg3k33kg3aavanl8g05n5mjkbqsbf8c4lya73f3rs4sfgb"; depends=[broom dplyr GGally ggplot2 gridSVG maptools plyr Rdpack rgdal rgeos rjson Rook sp]; }; vec2dtransf = derive2 { name="vec2dtransf"; version="1.1"; sha256="029xynay9f9rn0syphh2rhd3szv50ib4r0h0xfhhvbbb37h5dc9s"; depends=[sp]; }; veccompare = derive2 { name="veccompare"; version="0.1.0"; sha256="03nyyxvhhwfxxg5w6qflk7q234ipbhj9fd4abcp50sxz3diabch1"; depends=[corrplot gtools pander purrr qgraph reshape2 VennDiagram]; }; - vecsets = derive2 { name="vecsets"; version="1.1"; sha256="0k27g3frc9y9z2qlm19kfpls6wl0422dilhdlk6096f1fp3mc6ij"; depends=[]; }; + vecsets = derive2 { name="vecsets"; version="1.2.1"; sha256="086af6swjpbkd140yvb76affy5gn4p9xm41m3akm8axc3qk0hybg"; depends=[]; }; vegalite = derive2 { name="vegalite"; version="0.6.1"; sha256="0dlzhvrg3nj6knyycdgg3d1vzq3dn9vxb34fjin9hzilszqmarbk"; depends=[base64 clipr digest htmltools htmlwidgets jsonlite magrittr webshot]; }; - vegan = derive2 { name="vegan"; version="2.4-4"; sha256="1n57dzv2aid6iqd9fkqik401sidqanhzsawyak94qbiyh6dbd1x9"; depends=[cluster lattice MASS mgcv permute]; }; - vegan3d = derive2 { name="vegan3d"; version="1.1-0"; sha256="1rhqk9sj71mrb53r2pgdy87bdq3drx5j4a9ilwvw23dlvjry889l"; depends=[cluster rgl scatterplot3d vegan]; }; + vegan = derive2 { name="vegan"; version="2.4-6"; sha256="175mqr42mmxy98gpf3rky8alnkw3w1k90ggdw3cispl36841p76w"; depends=[cluster lattice MASS mgcv permute]; }; + vegan3d = derive2 { name="vegan3d"; version="1.1-1"; sha256="1jd9m2immkhgb1zr39gsgl746y7qpi5fhj8awmqq5lyr5j6jp6jh"; depends=[cluster rgl scatterplot3d vegan]; }; vegclust = derive2 { name="vegclust"; version="1.7.1"; sha256="1k1dcw424s19f8ngsksvdmsayahl1hkxd9v2irf8ljpp688l8idi"; depends=[Rcpp sp vegan]; }; vegdata = derive2 { name="vegdata"; version="0.9.1"; sha256="0w4dk7qcl89w04qgnlna5lk5hxnyrvwmgjjxmnvb6r5dspq7qyad"; depends=[foreign httr jsonlite XML]; }; vegetarian = derive2 { name="vegetarian"; version="1.2"; sha256="15ys1m8p3067dfsjwz6ds837n6rqd19my23yj8vw78xli3qmn445"; depends=[]; }; - vegtable = derive2 { name="vegtable"; version="0.1.0"; sha256="12nfw0263vw9x74siqdfmlyf7dxi0kyjrla5wiwn9gfq9xbz1hrj"; depends=[foreign plotKML qdapRegex sp taxlist vegdata]; }; - vein = derive2 { name="vein"; version="0.2.2-25"; sha256="048l32b47rqb1rjz5cay3izla4j5r8qpgyilym1m9dn7n6iay8ha"; depends=[raster rgdal rgeos sp units]; }; + vegtable = derive2 { name="vegtable"; version="0.1.1"; sha256="0vpkfagkvwkij4kn4zxxiddbnw1qxv6dajjlis4byl766606xi1v"; depends=[foreign plotKML qdapRegex sp taxlist vegdata]; }; + vein = derive2 { name="vein"; version="0.2.3"; sha256="0sidixipn8kc2i3n9qlgk76rqvxriz1z1ms2pmicv0qnj1a5pwgp"; depends=[raster rgdal rgeos sp units]; }; velociraptr = derive2 { name="velociraptr"; version="1.0"; sha256="1n7q08i37qbbh5cjq6jb4gmpzzip3wx2wx8xx5wpkln8n3nyiqki"; depends=[RCurl rgdal]; }; - velox = derive2 { name="velox"; version="0.1.0"; sha256="0jiza6myx4fj26agzbqjllr34f5kpmgcidrrv1r8jasljsbqf0n1"; depends=[raster Rcpp rgdal rgeos sp]; }; + velox = derive2 { name="velox"; version="0.2.0"; sha256="1jrarfsfflvpc0dqh5gnw92fk8zic222n7pr7hd0lhr5d389k6d0"; depends=[BH raster Rcpp rgdal rgeos sf sp]; }; vembedr = derive2 { name="vembedr"; version="0.1.3"; sha256="0zg6j0g9l7j36ifwabhxrin5z0dics66bqkc7x6rqijmizk1xpba"; depends=[htmltools httr magrittr stringr]; }; venn = derive2 { name="venn"; version="1.5"; sha256="0mb8864kmn98184q007jnn7cydh02sx8bh1mhsskycmi70c8w8ai"; depends=[]; }; vennLasso = derive2 { name="vennLasso"; version="0.1.1"; sha256="1xlf60xjvk0xq96mgzkj65q21mjk2k274xkcwsfmgir9xfdq60rd"; depends=[foreach igraph MASS Matrix Rcpp RcppEigen RcppNumerical survival VennDiagram visNetwork]; }; @@ -11668,16 +11905,17 @@ in with self; { vioplot = derive2 { name="vioplot"; version="0.2"; sha256="16wkb26kv6qr34hv5zgqmgq6zzgysg9i78pvy2c097lr60v087v0"; depends=[sm]; }; viopoints = derive2 { name="viopoints"; version="0.2-1"; sha256="0cpbkkzm1rxch8gnvlmmzy8g521f5ang3nhlcnin419gha0w6avf"; depends=[]; }; vipor = derive2 { name="vipor"; version="0.4.5"; sha256="112gc0d7f8iavgf56pnzfxb7hy75yhd0zlyjzshdcfbnqcd2a6bx"; depends=[]; }; - viridis = derive2 { name="viridis"; version="0.4.0"; sha256="03mha2935k1mw7mjjkq7mrx185hl0m3vq3967iiwbknpivbdxllk"; depends=[ggplot2 gridExtra viridisLite]; }; - viridisLite = derive2 { name="viridisLite"; version="0.2.0"; sha256="1546h44ng4dxs130jkh6lkh990hmp90m1w45sq5p47n546gr0k9d"; depends=[]; }; + viridis = derive2 { name="viridis"; version="0.5.0"; sha256="1ka6amybgzqkg3cbwfxwwqzzzpfn6q5jcia5am0bw48y5hbpg97y"; depends=[ggplot2 gridExtra viridisLite]; }; + viridisLite = derive2 { name="viridisLite"; version="0.3.0"; sha256="1by2l05f0yabwvv64lhnv7bbhx0w683s3wr9j2xda920ghpa23kq"; depends=[]; }; virtualspecies = derive2 { name="virtualspecies"; version="1.4-2"; sha256="19qw8vqf08x6fgm8w159qabpgr2wv2cxishpj6888ihcaa9ykp8f"; depends=[ade4 dismo raster rworldmap]; }; virustotal = derive2 { name="virustotal"; version="0.2.1"; sha256="0lky75al8zcvmfgx7a2s3bij8ya4avdsnv046lk7564zfd8rbymw"; depends=[httr plyr]; }; - visNetwork = derive2 { name="visNetwork"; version="2.0.1"; sha256="1dvnr7zw1azggmdvr281q2kyy6b7gj36vcjp2xc1zblwiz2r35sq"; depends=[htmltools htmlwidgets jsonlite magrittr]; }; + visNetwork = derive2 { name="visNetwork"; version="2.0.3"; sha256="0bs6war8m6vnzyhmzfmry5sfc5v1crq8i8r8nn70shf19k7pabmw"; depends=[htmltools htmlwidgets jsonlite magrittr]; }; visdat = derive2 { name="visdat"; version="0.1.0"; sha256="1r009jlg3wwg06j5066c09567q24986c74f0cd68kcbmihaxngbx"; depends=[dplyr ggplot2 magrittr purrr tidyr]; }; visreg = derive2 { name="visreg"; version="2.4-1"; sha256="1lkp668ni5p7k0vzcr75p1bsc1pyg0j0sghagdjb11abinmfzsm1"; depends=[lattice]; }; vistime = derive2 { name="vistime"; version="0.4.0"; sha256="0fahih28q7lyywnm4mri9macdx4c5b3c5djmg557f7dxlyhhjw0l"; depends=[plotly RColorBrewer]; }; visualFields = derive2 { name="visualFields"; version="0.4.3"; sha256="0ws3cz71hhhrf4xkdb644li04d31wf51xb2sq789bl2lf50q6a1a"; depends=[flip gridBase Hmisc matrixStats]; }; visualize = derive2 { name="visualize"; version="4.3.0"; sha256="1s49sx828f25d4n93mn28xdbc81zflk2sr3h8ffs2mkjr888qd8y"; depends=[]; }; + visvow = derive2 { name="visvow"; version="0.1.0"; sha256="0nb849m6dqfanqlaqcargw0rlf4ch9v09zmf0zqmxkwcil0w0dka"; depends=[Cairo DT ggplot2 plot3D plyr pracma psych Rdpack readxl shiny shinyBS svglite WriteXLS]; }; vita = derive2 { name="vita"; version="1.0.0"; sha256="114p2lzcr8rn68f0z4kmjdnragqlmi18axda9ma4sbqh8mrmjs9v"; depends=[randomForest Rcpp]; }; vitality = derive2 { name="vitality"; version="1.2"; sha256="0vjbf39i7qm3857gyidg2j5hfimpydav1sx2d07n12b8q1cs8k4p"; depends=[]; }; vkR = derive2 { name="vkR"; version="0.1"; sha256="0rb66am3y009wli8ykl58i02kzm6cdqz5v5d4vvzlbngz8crdkyy"; depends=[httr jsonlite XML]; }; @@ -11686,19 +11924,19 @@ in with self; { vocaldia = derive2 { name="vocaldia"; version="0.8.2"; sha256="15314sq2gbi1z47ppvy8y3ljjk12jq4k5a1dfyi56h2lpzrc76ny"; depends=[]; }; vortexR = derive2 { name="vortexR"; version="1.1.4"; sha256="1zjrywjh8nrzaqmrl2yym481j0y40126xz8lh52vc8pk041p3xdb"; depends=[betareg data_table GGally ggplot2 glmulti gtools irr plyr R_utils stringr vortexRdata]; }; vortexRdata = derive2 { name="vortexRdata"; version="1.0.3"; sha256="1pq910xaqk6d5amg8hj7xagb5wn2ahfrmqairf3vhwqx55lhjbg1"; depends=[]; }; - vote = derive2 { name="vote"; version="1.0-0"; sha256="1fx5x5248s48n86gdclv8pjnllly89rw0l6d2is263qqndn9fsk9"; depends=[formattable knitr]; }; + vote = derive2 { name="vote"; version="1.1-0"; sha256="1kxbv4062g4x9vn4gh74c6zwdshysw5n7vx9qljhq2wrdnqzjpyg"; depends=[formattable knitr]; }; voteogram = derive2 { name="voteogram"; version="0.2.0"; sha256="0m4j7iz7mc6z536vk0kmqfd8ank87ingv5vnjl7mn62r53c5fbsf"; depends=[dplyr ggplot2 jsonlite scales]; }; vottrans = derive2 { name="vottrans"; version="1.0"; sha256="1fp7jrw072ws39bqsg88bm2qndcv68aa2vdqwgnza58p1dfq3x9f"; depends=[quadprog]; }; vowels = derive2 { name="vowels"; version="1.2-1"; sha256="0177xysb5y8jzpxn9wdygq2f74gys67g29cd12zw77vlq3c3kkbr"; depends=[]; }; vows = derive2 { name="vows"; version="0.5"; sha256="06akjdbab9v7r47di7syvcm7gf4k81djizg8maszs5l1ksyhmv6b"; depends=[fda gamm4 mgcv oro_nifti RLRsim shape stringr]; }; voxel = derive2 { name="voxel"; version="1.3.2"; sha256="0sixcan3v5nczmrrxn56rw5dqjq8xx7z3cp18j23jq26mvq4nm34"; depends=[gamm4 ggplot2 lmerTest mgcv oro_nifti]; }; - vpc = derive2 { name="vpc"; version="1.0.0"; sha256="1d8k7d016qzd6njqraacdzb91j6drm5985aj6bxhcyz499pg3gbi"; depends=[classInt dplyr ggplot2 MASS readr reshape2 survival]; }; - vqtl = derive2 { name="vqtl"; version="1.2.0"; sha256="1l5b1bchl08z3bx5y6dbvbw4hnxzb6i5i6h7vv5kd8mbffkdspyb"; depends=[dglm doParallel dplyr evd foreach ggplot2 gtools iterators knitr lazyeval qtl stringr testthat tidyr]; }; + vpc = derive2 { name="vpc"; version="1.0.1"; sha256="0zxiakls7wi0278f6v74xdcaw500am8gfs8lp7cciaxnw2clvsbv"; depends=[classInt dplyr ggplot2 MASS readr reshape2 survival]; }; + vqtl = derive2 { name="vqtl"; version="2.0.0"; sha256="193jd5wcz8s3n2571jn5f6vz7kgf6l8a6w9anzd53pgc2644w3f9"; depends=[dglm doParallel dplyr evd foreach ggplot2 gtools hglm iterators knitr lazyeval purrr qtl stringr testthat tidyr]; }; vrcp = derive2 { name="vrcp"; version="0.1.1"; sha256="1wrch1dqy752gkj24h1dgi2x3kf1797xj4pf1s9mszf3x3ic905d"; depends=[ggplot2]; }; vrmlgen = derive2 { name="vrmlgen"; version="1.4.9"; sha256="0lifhhf41yml4k83wpkssl14jgn8jaw1lcknwbci1sd8s1c4478l"; depends=[]; }; vrtest = derive2 { name="vrtest"; version="0.97"; sha256="00hdgb0r18nwv3qay97b09kqqw9xqsbya06rrjyddqh9r6ggx1y0"; depends=[]; }; vscc = derive2 { name="vscc"; version="0.2"; sha256="1p14v8vd8kckd44g4dvzh51gdkd8jvsc4bkd2i4csx8vjiwrni5w"; depends=[mclust teigen]; }; - vtreat = derive2 { name="vtreat"; version="1.0.1"; sha256="1pqx8c1cd0rxdcchyzgjk3kjjvq4y6x0pysxs2gg192ap4svxlw2"; depends=[]; }; + vtreat = derive2 { name="vtreat"; version="1.0.2"; sha256="17w1iy0bypdyaci6yjfbqhdwvnbacn9kpb1i28k3664c96qm8gs7"; depends=[]; }; vudc = derive2 { name="vudc"; version="1.1"; sha256="0zxz6n3ixa3xjzcinky8ymqjx9w8y8z65mz8d84dl00mxzkmkz4h"; depends=[]; }; vwr = derive2 { name="vwr"; version="0.3.0"; sha256="1h790vjcdfngs1siwldvqz8jrxpkajl3266lzadfnmchfan1x7xv"; depends=[lattice latticeExtra stringdist]; }; wBoot = derive2 { name="wBoot"; version="1.0.3"; sha256="08qgkkv6jvqmxq5gvfp7jbrc3k8mxajfww7k8a3p8888aq411p7q"; depends=[boot simpleboot]; }; @@ -11706,53 +11944,55 @@ in with self; { wNNSel = derive2 { name="wNNSel"; version="0.1"; sha256="19j2yz6lvkxpmjr0vv6pjc7j1c02y0hb3gay5sy1y0xk706aggb5"; depends=[]; }; wPerm = derive2 { name="wPerm"; version="1.0.1"; sha256="0f3v0kba87wkwyii0pzvs6a8ja897aifpvwkvryl2hzxxxaml7z4"; depends=[]; }; wSVM = derive2 { name="wSVM"; version="0.1-7"; sha256="0c7rblzgagwfb8mmddkc0nd0f9rv6kapw8znpwapv3fv0j2qzq7h"; depends=[MASS quadprog]; }; - wTO = derive2 { name="wTO"; version="1.4.1"; sha256="0i1b82s05gh8vvh6dng37rgh35cq05v0hb3ip36svw5fyd9xpd4w"; depends=[data_table igraph magrittr plyr reshape2 som visNetwork]; }; + wTO = derive2 { name="wTO"; version="1.4.2"; sha256="05mbf6dpl9p1b583kl9gfjqh8xlzdkyagdalhkh6jahcmg9f1fcy"; depends=[data_table igraph magrittr plyr reshape2 som visNetwork]; }; waccR = derive2 { name="waccR"; version="0.1.0"; sha256="092p1bibyqx1gcrch68l9ilzilg5aqf46b6iagm562292cfi074l"; depends=[dplyr lubridate magrittr rvest tibble xml2]; }; waffect = derive2 { name="waffect"; version="1.2"; sha256="0r5dvm0ggyxyv81hxdr1an658wkqkhqq2xaqzqpnh4sh4wbak35a"; depends=[Rcpp]; }; waffle = derive2 { name="waffle"; version="0.7.0"; sha256="1qjmai33p96cyavi9lgi6k30h6fj7db5sr569v9jf4kwx92c61df"; depends=[extrafont ggplot2 gridExtra gtable RColorBrewer]; }; wahc = derive2 { name="wahc"; version="1.0"; sha256="1324xhajgmxq6dxzpnkcvxdpm2m3g47drhyb2b3h227cn3aakxyg"; depends=[]; }; wakefield = derive2 { name="wakefield"; version="0.3.0"; sha256="1f74503ar4hw48j13npgzybvwc631xndldidqnyfk72wb11fzi4z"; depends=[chron dplyr ggplot2 stringi]; }; - walker = derive2 { name="walker"; version="0.2.0"; sha256="0mr4ihai82w217kmg60b910jk9pjmzysws8b2j91w5528yv618kv"; depends=[bayesplot BH dplyr ggplot2 KFAS Rcpp RcppArmadillo RcppEigen rstan StanHeaders]; }; + walker = derive2 { name="walker"; version="0.2.1"; sha256="1q99nny7mdh7wc3yj4dz0s2454aqyxjcsp5hpjrha14h4p3fcirf"; depends=[bayesplot BH dplyr ggplot2 KFAS Rcpp RcppArmadillo RcppEigen rstan StanHeaders]; }; walkr = derive2 { name="walkr"; version="0.3.4"; sha256="01278hfa9mppwqmr54826gb65pswhqbh7ai8ij6m4ncc0fk6pvvd"; depends=[ggplot2 hitandrun limSolve MASS Rcpp RcppEigen shinystan]; }; walkscoreAPI = derive2 { name="walkscoreAPI"; version="1.2"; sha256="1c2gfkl5yl3mkviah8s8zjnqk6lnzma1yilxgfxckdh5wywi39fx"; depends=[]; }; - wallace = derive2 { name="wallace"; version="1.0"; sha256="0bdc41l83l7607vx25frr6snhd8pqp9cq0qqpzcxf6nvx5grjni2"; depends=[dismo dplyr DT ENMeval leaflet leaflet_extras magrittr maptools raster RColorBrewer rgdal rgeos shiny shinyjs shinythemes spocc spThin]; }; + wallace = derive2 { name="wallace"; version="1.0.4"; sha256="1adc070z94gwpfv4b1r0m2ylw9nzigzf412zlllbzlmn3pz42076"; depends=[dismo dplyr DT ENMeval leaflet leaflet_extras magrittr maptools raster RColorBrewer rgdal rgeos shiny shinyjs shinythemes spocc spThin]; }; wally = derive2 { name="wally"; version="1.0.9"; sha256="1g6dywny8s8fpdnfvrlbzsp9d9dhxdxrm1j4dd3b9r6rpiajf964"; depends=[data_table prodlim riskRegression]; }; + walmartAPI = derive2 { name="walmartAPI"; version="0.1.5"; sha256="1nng8izncj2nmmpywn1ggpzvjh8q7y3q6260qhy9kbmvrrl26spf"; depends=[dplyr glue httr magrittr purrr stringr tibble]; }; walrus = derive2 { name="walrus"; version="1.0.1"; sha256="032s2k122z5cqkcjvh9gva4vvmj5prn6z3rs8j5y16d98kgambpy"; depends=[ggplot2 jmvcore R6 WRS2]; }; wand = derive2 { name="wand"; version="0.2.0"; sha256="1p2r96nyr36jv418xi4j2ldarymb4xmpis6d2iz7mq9755kb4fnh"; depends=[dplyr purrr rappdirs Rcpp stringi tibble tidyr]; }; - warbleR = derive2 { name="warbleR"; version="1.1.9"; sha256="1ppp654n8kdrgg6swz460vrn8f3x829nlds51xqc2x2bk084v9cf"; depends=[bitops doParallel dtw fftw foreach iterators jpeg maps monitoR pbapply pbmcapply proxy RCurl rjson seewave signal tuneR]; }; + warbleR = derive2 { name="warbleR"; version="1.1.10"; sha256="0xwzrl08zvq4r280adz50rvr304i391l0g8m90dd5cdwxmfn071x"; depends=[bitops doParallel dtw fftw foreach iterators jpeg maps monitoR NatureSounds pbapply pbmcapply proxy RCurl rjson seewave signal tuneR]; }; warpMix = derive2 { name="warpMix"; version="0.1.0"; sha256="13zbl4aifhg7j5b3vpwgzgs09hr7yblz0rckmj5qh40s78j8cpfn"; depends=[fda fields lme4 MASS nlme reshape2]; }; + washdata = derive2 { name="washdata"; version="0.1.2"; sha256="01cnlhymh3qg9c7fda8s6lvm4j2vklmb72dfk17sn4p0kkikf9m8"; depends=[]; }; wasim = derive2 { name="wasim"; version="1.1.2"; sha256="1zydzw7cihhdwv0474fnc4lgaq5fwrv8jinz79vkbidbgcy7i2fd"; depends=[fast MASS qualV tiger]; }; water = derive2 { name="water"; version="0.7"; sha256="1rdwmld4xxaxx003cjj67jylgg507r2jjqvncbp539q7c2z5b201"; depends=[raster rgdal sp]; }; waterData = derive2 { name="waterData"; version="1.0.8"; sha256="0884agh876wf3qlbc75fbaa47x2iwvncz7r2l25qw34n8lxq1yr6"; depends=[dataRetrieval lattice latticeExtra lubridate xml2]; }; waterfall = derive2 { name="waterfall"; version="1.0.2"; sha256="0jy6l9mx0dixwnkychdl18sf4xh73pm0qd1jyxp9rlnv1vcragjp"; depends=[lattice]; }; - waterfalls = derive2 { name="waterfalls"; version="0.1.1"; sha256="0x3f6phlrismivbaf37vqnz30wvz8xzj33qwl2wyg6lijxbmg551"; depends=[ggplot2]; }; + waterfalls = derive2 { name="waterfalls"; version="0.1.2"; sha256="01gby1mlhrwcalizpywxcakkx2zifswb0188nrl6z9dkkd1866lm"; depends=[ggplot2]; }; waveband = derive2 { name="waveband"; version="4.6"; sha256="1y2qi2zb8l2ap6f8ihnpq2yavic464bl5mp5yv1dscbk0nmfn966"; depends=[wavethresh]; }; waved = derive2 { name="waved"; version="1.1-2"; sha256="17pr9qhz0dbbcr78vwm964d9zd7yrfrqvadr1lwf756bsrscmlg3"; depends=[]; }; + wavefunction = derive2 { name="wavefunction"; version="1.0.0"; sha256="1g0g9i0s93lcpcx7icqn15bvkmd79slkgimspvvwp2bxdsc5nnf2"; depends=[]; }; wavelets = derive2 { name="wavelets"; version="0.3-0"; sha256="141s7z7wxl5plxp7xp7wczswlcvb18a4h3n881l9qc4ny9p7gfpa"; depends=[]; }; wavemulcor = derive2 { name="wavemulcor"; version="2.1.0"; sha256="0z2vyb3rsxxh7k9fgaxi0xa6rwrw3pka1h4xkfrb9xydsacwbvx2"; depends=[waveslim]; }; - waver = derive2 { name="waver"; version="0.2.0"; sha256="0zxhnrxc68i5jvkc0k2gk11wf0hj92slhb40qiddryx3i7m2yrli"; depends=[geosphere rgdal rgeos sp]; }; + waver = derive2 { name="waver"; version="0.2.1"; sha256="1kl14cd96fwrqvk35sqbgi8bf31gc2ccxxy5d1v46scwyqkb0g5l"; depends=[geosphere rgdal rgeos sp]; }; waveslim = derive2 { name="waveslim"; version="1.7.5"; sha256="0lqslkihgrd7rbihqhhk57m9vkbnfsznkvk8430cvbcsn7vridii"; depends=[]; }; wavethresh = derive2 { name="wavethresh"; version="4.6.8"; sha256="1nz74bm7pgck1i9c28svxnic8wkwkm5dhc8bhrxiih5wxb36kcwk"; depends=[MASS]; }; wbs = derive2 { name="wbs"; version="1.3"; sha256="1fdf3dj23n63nfnzafq88sxqvi15cbrzsvc8wrljw1raq5z012yv"; depends=[]; }; - wbstats = derive2 { name="wbstats"; version="0.1.1"; sha256="18yws6zgvs773mhml5hn6aqyc2xyas10cg5jvnk4l50wir2qknxq"; depends=[httr jsonlite]; }; - wbsts = derive2 { name="wbsts"; version="0.3"; sha256="1h749j20q30lrn3b4ffcap3mvxjpih1gchvv8yag0gbzcs0wc1fm"; depends=[mvtnorm wmtsa]; }; + wbstats = derive2 { name="wbstats"; version="0.2"; sha256="0rfc9c6892jq7y17dwp6vsn62ggnac964xndmxq3mip6k2pk8yi0"; depends=[httr jsonlite tidyr]; }; wdman = derive2 { name="wdman"; version="0.2.2"; sha256="1a6zav82w0krk0ncm5b79ahy2hc0xakg9i1m2143ih5p6zvcm5m0"; depends=[assertthat binman semver subprocess yaml]; }; - weatherData = derive2 { name="weatherData"; version="0.5.0"; sha256="1l207m506wj0jk3skpwhwq66ci4v2jjaz7sbw30ywgpicw9mizs9"; depends=[curl plyr]; }; weathermetrics = derive2 { name="weathermetrics"; version="1.2.2"; sha256="1hjhgsy3v8328hv4czxxz7kp68sxc10sy10f3dv5j8f6pka6qlsp"; depends=[]; }; weatherr = derive2 { name="weatherr"; version="0.1.2"; sha256="11sb5bmqccqkvlabsw4siy9n6ivsrvxavywvaffgrs3blmnygql9"; depends=[ggmap lubridate RJSONIO XML]; }; webTRISr = derive2 { name="webTRISr"; version="0.1.0"; sha256="19xal5zg9mg25vzvkz55zm6gkd8b0y3sw3zbbrxn73a1jg8x5v0l"; depends=[dplyr httr jsonlite lubridate magrittr purrr readr stringr]; }; webchem = derive2 { name="webchem"; version="0.3.0"; sha256="11ryyniqcf6pa5avc5qks0hpksmapk3564bjva86626vml0mixby"; depends=[httr jsonlite RCurl rvest stringr xml2]; }; + webdriver = derive2 { name="webdriver"; version="1.0.4"; sha256="0k031f26iihk2dxypqvfi60bhpj78yhwvhbmxqv7yrpa8s6j5flm"; depends=[base64enc callr curl debugme httr jsonlite R6 showimage]; }; webglobe = derive2 { name="webglobe"; version="1.0.2"; sha256="1277d6fkgrgixlhikfwf0r6z8g5b7mah905xi219qsfycxmifgn9"; depends=[geojsonio httpuv jsonlite]; }; webmockr = derive2 { name="webmockr"; version="0.1.0"; sha256="0jfjn0y62rrwx88vhx4xfgsf36f147b3yzwvpyshxwvxn9khza5i"; depends=[curl jsonlite lazyeval magrittr R6 urltools]; }; webp = derive2 { name="webp"; version="0.4"; sha256="0jsyjynrsrqpbg93rn48xrjclkvwmz2c2lhcfli5djny122ymh6r"; depends=[]; }; webreadr = derive2 { name="webreadr"; version="0.4.0"; sha256="0l3l5g4zj5faxqi1kqwx9lq91gbj40z2q3csrsmpal08qnwkxs90"; depends=[Rcpp readr]; }; websearchr = derive2 { name="websearchr"; version="0.0.2"; sha256="1yf8ch86khg5syppcxs94mxgc3i5623qyhzh174nssw1wzyqb9ba"; depends=[]; }; - webshot = derive2 { name="webshot"; version="0.4.2"; sha256="1ljp2c7yj21smr8ihzvmcs29z5gjr9wwfqfp33zrqc8xd8599iq9"; depends=[jsonlite magrittr]; }; + webshot = derive2 { name="webshot"; version="0.5.0"; sha256="07r71zzmggp4jf92x4ws4wg6v1x98vaj01lsar85bnb30n5vx8gh"; depends=[jsonlite magrittr processx withr]; }; webuse = derive2 { name="webuse"; version="0.1.2"; sha256="0ks3pb9ir778j9x4l0s4ly2xa1jc9syddqm65wkck52q3lrarg3l"; depends=[haven]; }; webutils = derive2 { name="webutils"; version="0.6"; sha256="1basl7q2m8y9nw5ksi1kdz6an9pybvsmdd4snrm7a37041xymnps"; depends=[curl jsonlite]; }; webvis = derive2 { name="webvis"; version="0.0.2"; sha256="1cdn9jrpg2sbx4dsj0xf7m0daqr7fqiw3xy1lg0i0qn9cpvi348f"; depends=[]; }; wec = derive2 { name="wec"; version="0.4-1"; sha256="10lqh43536d44d6082rpp11q1323pmjbmgrgb8v9mrk9c1ysf50w"; depends=[dplyr]; }; - weco = derive2 { name="weco"; version="1.0"; sha256="1akn85igd6k5cfj9hzn3g8a77qzhlzwyc2p4l6y8wigyncg7wyqi"; depends=[]; }; + weco = derive2 { name="weco"; version="1.1"; sha256="1xnhbm499vypn8iwm33h1hv0wih1lj3bglm1rlgxaypbwj1acg53"; depends=[]; }; weightTAPSPACK = derive2 { name="weightTAPSPACK"; version="0.1"; sha256="0kpfw477qka5qrc6sh73had38xbrwrqp1yv0dj2qiihkiyrp67ks"; depends=[HotDeckImputation mice plyr survey]; }; weightedScores = derive2 { name="weightedScores"; version="0.9.5.1"; sha256="118hzwaarcb8pk2zz83m6zzzndlpbbzb7gz87vc7zggpa998k1gr"; depends=[mvtnorm rootSolve]; }; weightr = derive2 { name="weightr"; version="1.1.2"; sha256="13wy7ygx7khbmymg2r0rr6mrl4lbapf5bnnq1rq8izl38sjk7csx"; depends=[]; }; @@ -11767,18 +12007,19 @@ in with self; { wgaim = derive2 { name="wgaim"; version="1.4-11"; sha256="1jjyp100dcjjczp61xlvhmy48ynniqcys535vzbgswhr7fvijymg"; depends=[lattice qtl]; }; wgeesel = derive2 { name="wgeesel"; version="1.4"; sha256="0d49j24jmk6n7fzzdvhc9fxi8yb1shghf7fc7jvm3cahhjffxay2"; depends=[bindata geepack MASS PoisNor]; }; wgsea = derive2 { name="wgsea"; version="1.8"; sha256="1114wik011sm2n12bwm2bhqvdxagbhbscif45k4pgxdkahy2abpi"; depends=[snpStats]; }; + whereport = derive2 { name="whereport"; version="0.1"; sha256="1gdqzr2hrnpxbwl7cfps4m3xja8wkgwfs50i2nailybympvdnxm4"; depends=[dplyr]; }; whisker = derive2 { name="whisker"; version="0.3-2"; sha256="0z4cn115gxcl086d6bnqr8afi67b6a7xqg6ivmk3l4ng1x8kcj28"; depends=[]; }; whoami = derive2 { name="whoami"; version="1.1.2"; sha256="1wkgh8mxm2ci5ylwppbh38sx5fm5rsm06bimdpc07z35bz4825xg"; depends=[httr jsonlite]; }; whoapi = derive2 { name="whoapi"; version="0.1.2"; sha256="0ib0an08xsxan24q8mb5ai375njmkdc61lh4321rzgr25iqvi682"; depends=[httr]; }; wicket = derive2 { name="wicket"; version="0.4.0"; sha256="1lizzmj69bswzlk18fv2v4yxxc6dynvmkymdiafznzcyyz4a8xnf"; depends=[BH Rcpp]; }; widals = derive2 { name="widals"; version="0.5.4"; sha256="1bl59s1r4gkvq4nkf94fk7m0zvhbrszkgmig66lfxhyvk9r84fvb"; depends=[snowfall]; }; widenet = derive2 { name="widenet"; version="0.1-2"; sha256="1nimm8szbg82vg00f5c7b3f3sk0gplssbl4ggasjnh7dl621vfny"; depends=[glmnet relaxnet]; }; - widgetframe = derive2 { name="widgetframe"; version="0.3.0"; sha256="1yza8wylfrs3lfrc1hlhjga0j94m7ngq9ikkia1f87wmc3w59sjh"; depends=[htmltools htmlwidgets magrittr purrr]; }; + widgetframe = derive2 { name="widgetframe"; version="0.3.1"; sha256="0j0d73m72nzfc1wyrgsqr99ldx72adis6pd57mpim55hz0n9l224"; depends=[htmltools htmlwidgets magrittr purrr]; }; widyr = derive2 { name="widyr"; version="0.1.0"; sha256="0vy34phli9jynjdwss8cpadaaizh9bhc1h0amsblc0il6xanviqm"; depends=[broom dplyr Matrix purrr reshape2 tidyr tidytext]; }; wikibooks = derive2 { name="wikibooks"; version="0.2"; sha256="178lhri1b8if2j7y7l9kqgyvmkn4z0bxp5l4dmm97x3pav98c7ks"; depends=[]; }; wikilake = derive2 { name="wikilake"; version="0.3"; sha256="1y4vinm8gxyj6x36nb4xzhx1yf96x1nwlzzhvj4g36rbcix7dn6q"; depends=[maps rvest selectr sp stringi stringr WikipediR xml2]; }; wikipediatrend = derive2 { name="wikipediatrend"; version="1.1.14"; sha256="00i38py9n4l0iqkn3257a3jbiwh3hrmx1p9x6rfh9sgfcch8yyj5"; depends=[hellno httr jsonlite RColorBrewer rvest stringr xml2]; }; - wikitaxa = derive2 { name="wikitaxa"; version="0.1.4"; sha256="0d6ycn8j40lcc4plv7z34h14icaljywbl7b91gd803wxln4nhr6f"; depends=[crul curl data_table jsonlite tibble WikidataR xml2]; }; + wikitaxa = derive2 { name="wikitaxa"; version="0.2.0"; sha256="06ccb1ix5lsz3jgr3aq2ywq9bdnz020sa5dzlq1ayw95gdqj6icl"; depends=[crul curl data_table jsonlite tibble WikidataR xml2]; }; wildcard = derive2 { name="wildcard"; version="1.1.0"; sha256="0qkzab84z95g5f4fv3v4wisccgd7k9m3210pz4nvm1x8rfaqfjf1"; depends=[magrittr stringi]; }; wildlifeDI = derive2 { name="wildlifeDI"; version="0.2"; sha256="0z8zyrl3d73x2j32l6xqz5nwhygzy7c9sjfp6bql5acyfvn7ngjv"; depends=[adehabitatLT rgeos sp]; }; wildpoker = derive2 { name="wildpoker"; version="1.1"; sha256="1302ain55spz34irmq49sp9b1pvrn2nxmzmqs8m9wdk6g82h3s27"; depends=[]; }; @@ -11787,65 +12028,68 @@ in with self; { wingui = derive2 { name="wingui"; version="0.2"; sha256="0yf6k33qpcjzyb7ckwsxpdw3pcsja2wsf08vaca7qw27yxrbmaa3"; depends=[Rcpp]; }; wiod = derive2 { name="wiod"; version="0.3.0"; sha256="1f151xmc6bm5d28w5123nm0hv7j1v8hay4jk5fk8pwn6yljl1pah"; depends=[decompr gvc]; }; wiqid = derive2 { name="wiqid"; version="0.1.3"; sha256="06six8w77lf9rc49hnr42xgn2jvhb84wvqgi08ns22yn4z2iz9pz"; depends=[coda HDInterval MASS truncnorm]; }; - withr = derive2 { name="withr"; version="2.1.0"; sha256="12v263fj6l3ds9nrsj6q7h6zhbivp3w2jk7w9dpk1610d3nx9gf8"; depends=[lattice]; }; + withr = derive2 { name="withr"; version="2.1.1"; sha256="17pbllxv18gf1mli9mm5px4wzp364907a4wrl20r1y5q8qwawpxx"; depends=[]; }; wkb = derive2 { name="wkb"; version="0.3-0"; sha256="0s7libkg27jdmcw5qmk5j0cmz3nqq7ny4q8gy4vhbgsgj4gbbdn9"; depends=[sp]; }; wktmo = derive2 { name="wktmo"; version="1.0.5"; sha256="05pjyk0xsdazbi1x7xfmg097ybybd60zmzzm7sch1ikp05hzn0wb"; depends=[]; }; wle = derive2 { name="wle"; version="0.9-91"; sha256="18gqwrrw618f1xx93n0lk95gpi3lxvfkr6fmlb82v2wiibb7k7ak"; depends=[circular]; }; wmlf = derive2 { name="wmlf"; version="0.1.2"; sha256="0zxw84l5v12r15hpyd1kbajjz3cbkn5g884kmj72y7yi0yi1b6d6"; depends=[waveslim]; }; - wmtsa = derive2 { name="wmtsa"; version="2.0-2"; sha256="14znrylyazsj3d8nxgh3nvr94ifckan6gwy12b43zsyskzqp9zbg"; depends=[ifultools MASS splus2R]; }; - wnl = derive2 { name="wnl"; version="0.3.1"; sha256="1sk99w3qqswzvkh0nx8na2rc5v7c9rj4iigs606sywjqffisss9y"; depends=[numDeriv]; }; - wnominate = derive2 { name="wnominate"; version="1.2"; sha256="0kkdlhliihv45hc0fd25kairxd9r71hcx04ri9l0iy8cyhjs2n12"; depends=[pscl]; }; + wmtsa = derive2 { name="wmtsa"; version="2.0-3"; sha256="1q436krz5p1f4a7a7sya6a9rh9x9mi8zzcgq66gbk9w9w4hcqcj6"; depends=[ifultools MASS splus2R]; }; + wnl = derive2 { name="wnl"; version="0.3.2"; sha256="1gqp2rrfn4971f12fbf90habk2zqb0hw92nf5c6vvvyx1zad7m81"; depends=[numDeriv]; }; + wnominate = derive2 { name="wnominate"; version="1.2.5"; sha256="0pvw36jzx90z7ah4f7cyf95csdn5x7n9rh3ddsppa61y1dmjsn5k"; depends=[pscl]; }; woe = derive2 { name="woe"; version="0.2"; sha256="15mvcmwnrqxpzn054lq85vyzq5rgxkiwbd40gnn4s3ny1xdrwgsm"; depends=[]; }; - woeBinning = derive2 { name="woeBinning"; version="0.1.4"; sha256="0fjflnhyya93xns2mcklq8vw5zwwivw1ahz4smdmlcpxf35f9cz9"; depends=[]; }; - woeR = derive2 { name="woeR"; version="0.1.1"; sha256="1wnfcdvrakgbkvas3kb9rwhffj6gfmhi4wa5wamg43a7gribdnp0"; depends=[dplyr]; }; + woeBinning = derive2 { name="woeBinning"; version="0.1.5"; sha256="04pw32vng31v1n4r1g1fisvv8cacxmcx7m65vw4a2byamp2d25yq"; depends=[]; }; + woeR = derive2 { name="woeR"; version="0.1.3"; sha256="15bdhgjq39svzaqzmfykyaq4r543lq15jf0sz8m9bwjv2c6vlx5l"; depends=[dplyr]; }; womblR = derive2 { name="womblR"; version="1.0.2"; sha256="0cnggwi47pmyjqz78vcvdzv3kpss6v4h404w2d7dii0zfqjr7bpk"; depends=[msm mvtnorm Rcpp RcppArmadillo]; }; wooldridge = derive2 { name="wooldridge"; version="1.2.0"; sha256="1ib7qqmzybk7a171ny0zszh1lw2zgqyz35rb7g6y4ign2ng9ml9k"; depends=[]; }; - word_alignment = derive2 { name="word.alignment"; version="1.0.7"; sha256="0mpkqq4q8f4v3hwmb0yrwr4gq8ij59nhr8vqwqm4i5cxvqlsi7cr"; depends=[data_table openxlsx quanteda]; }; - wordbankr = derive2 { name="wordbankr"; version="0.2.0"; sha256="041d5v3gm7bihx85k7kxwlqgg6vs24wzs2h59zf3l3cs39mhrhs5"; depends=[assertthat dplyr magrittr RMySQL stringr tidyr]; }; + word_alignment = derive2 { name="word.alignment"; version="1.0.8"; sha256="0f8fxz7qhj618bz16mmwm3fhrd9p0idsx6pj0cdx72dkvfgkdwn0"; depends=[data_table openxlsx quanteda]; }; wordcloud = derive2 { name="wordcloud"; version="2.5"; sha256="1ajqdkm8h1wid3d41zd8v7xzf2swid998w31zrghd45a5lcp7qcm"; depends=[RColorBrewer Rcpp slam]; }; - wordcloud2 = derive2 { name="wordcloud2"; version="0.2.0"; sha256="0ylsmijrym61s1vhvf8csimznd1yg497xa3yign4bgi5jx4k64ny"; depends=[base64enc htmlwidgets]; }; + wordcloud2 = derive2 { name="wordcloud2"; version="0.2.1"; sha256="1a2q42bn65q4idxq0vxysyam16q6c18inxv4dqhfy0x52j8z9x6k"; depends=[base64enc htmlwidgets]; }; wordmatch = derive2 { name="wordmatch"; version="1.0"; sha256="0zscp361qf79y1zsliga18hc7wj36cnydshrqb9pv67b65njrznz"; depends=[plyr reshape2]; }; wordnet = derive2 { name="wordnet"; version="0.1-14"; sha256="12a21zlc7h973gi1632gngbk8b09vhp3sldh1mh9b5n6h18ga25p"; depends=[rJava]; }; wordspace = derive2 { name="wordspace"; version="0.2-0"; sha256="0rrnbimf68ax1qxsyn7g0kd76abijzxg5i11h93l0fnzi2g2a9xn"; depends=[cluster iotools MASS Matrix Rcpp sparsesvd]; }; - worldmet = derive2 { name="worldmet"; version="0.7.5"; sha256="08mj3m0r9rnljlsk3x25cp4da3bdv9qc1jgy1wrd1zg5908j6dis"; depends=[dplyr leaflet openair plyr RCurl readr zoo]; }; + worldmet = derive2 { name="worldmet"; version="0.8.3"; sha256="0pz4kh11y93gad4jhpyzqz66sma1ngvavmpy4ki4z1dcry452yvs"; depends=[doParallel dplyr foreach leaflet openair readr zoo]; }; worms = derive2 { name="worms"; version="0.2.1"; sha256="0qxij56wvhlz9pgc1wp5nr3yi2r0h0r7xvlhhvsflch60gprpi1s"; depends=[httr plyr]; }; worrms = derive2 { name="worrms"; version="0.2.0"; sha256="1mqv2j9235pqdwqnw11b0zdv763wf9wqjqpf3p6fxpmki24j7xk6"; depends=[crul data_table jsonlite tibble]; }; + wosr = derive2 { name="wosr"; version="0.1.0"; sha256="0j3srk8siiip192w6wdc2w9azbhpdxyrzgyinwmi1z58xqmi9c38"; depends=[httr jsonlite pbapply xml2]; }; wpp2008 = derive2 { name="wpp2008"; version="1.0-1"; sha256="0gd3vjw1fpzhp3qlf1jpc24f76i0pxsjs5pb1v3k2si6df7q4msd"; depends=[]; }; wpp2010 = derive2 { name="wpp2010"; version="1.2-0"; sha256="1h87r1cn4lnx80dprvawsyzfkriscqjgr27gvv7n19wvsx8qd57k"; depends=[]; }; wpp2012 = derive2 { name="wpp2012"; version="2.2-1"; sha256="00283s4r36zzwn67fydrl7ldg6jhn14qkf47h0ifmsky95bd1n5k"; depends=[]; }; wpp2015 = derive2 { name="wpp2015"; version="1.1-0"; sha256="01vsdma2fgh0vd96ly4f704hl200v0w8ksz60gjxhm44ih3qszh3"; depends=[]; }; - wpp2017 = derive2 { name="wpp2017"; version="1.1-1"; sha256="18g0jvhskqrx6aafhzcyzjhmm6rwpj6ig5vq11rxax423hdn6aq5"; depends=[]; }; + wpp2017 = derive2 { name="wpp2017"; version="1.1-2"; sha256="18hyygk928kp25n5iy5nwz2fdicgpk3ncpkp2pksnp0cxzw3585w"; depends=[]; }; wppExplorer = derive2 { name="wppExplorer"; version="2.1-1"; sha256="0n0ayn8bxkrabw2iyqv3hfkdchbk9bzv1lhkjpxnjb6z3zl1sggl"; depends=[DT ggplot2 googleVis Hmisc plyr reshape2 shiny shinyjs shinythemes wpp2017]; }; wql = derive2 { name="wql"; version="0.4.9"; sha256="0m16l807mhcjkbqhlzhc24pw4hl78fjyykiszlg337x3qs803fg2"; depends=[ggplot2 reshape2 zoo]; }; wqs = derive2 { name="wqs"; version="0.0.1"; sha256="14qaa9g9v4nqrv897laflib3wwhflyfaf9wpllmbi5xfv9223rcg"; depends=[glm2 Rsolnp]; }; wrangle = derive2 { name="wrangle"; version="0.4"; sha256="0d1xdcvgcv8bn20s90sn1dmzhcdz39yr1m2bkcjbvavm132p96bl"; depends=[dplyr lazyeval magrittr tidyr]; }; - wrapr = derive2 { name="wrapr"; version="1.0.1"; sha256="1n16rqgm0hc7qr8amrdy9q30pzk6s54b3wjl27vk0xaaxaq0042c"; depends=[]; }; - wrassp = derive2 { name="wrassp"; version="0.1.4"; sha256="0w1hzxwk00lk1hkdxxz6vqa6xzw5sf60y54xzfr510yd02x3r1gn"; depends=[]; }; + wrapr = derive2 { name="wrapr"; version="1.1.1"; sha256="01v41qcsdpdisvccagba3l67834r6k0lhlalwna7lrvwx008cd9s"; depends=[]; }; + wrassp = derive2 { name="wrassp"; version="0.1.6"; sha256="1f6yyw6mmwc267cd9v17k6n4fhymi0y201bm6ii56rcw86n4ix77"; depends=[]; }; write_snns = derive2 { name="write.snns"; version="0.0-4.2"; sha256="0sxg7z8rnh4lssbivkrfxldv4ivy37wkndzzndpbvq2gbvbjnp4l"; depends=[]; }; writexl = derive2 { name="writexl"; version="0.2"; sha256="0hclrbn21sc0ifd2c5xfww84jf47412wzs86a73swxxjzcbrkg5k"; depends=[]; }; wrspathrow = derive2 { name="wrspathrow"; version="0.1"; sha256="1xkh12aal85qhk8d0pdj2qbi6pp4jnr6zbxkhdw2zwav57ly3f4i"; depends=[raster rgdal rgeos sp wrspathrowData]; }; wrspathrowData = derive2 { name="wrspathrowData"; version="1.0"; sha256="0a1aggcll0fmkwfg4h7rs4j5h3v1bh95dkbriwrb0bx0cikg63x3"; depends=[]; }; - wrswoR = derive2 { name="wrswoR"; version="1.0-1"; sha256="1czw3g2j6as024wwvxiizvvxjmsxmxhz86jbw2lh95nh61znb7l8"; depends=[logging Rcpp]; }; + wrswoR = derive2 { name="wrswoR"; version="1.1"; sha256="0jnb818xz841bx2i03k3hhy4hxcwpxblskg9nrc8kgbc22rxx4lz"; depends=[logging Rcpp]; }; wrswoR_benchmark = derive2 { name="wrswoR.benchmark"; version="0.2"; sha256="0vzs2lqq48kzk63xz2k9b7qcy0ph5yyvih6z98jfz36kpdfhdps9"; depends=[curl lazyeval]; }; wru = derive2 { name="wru"; version="0.1-7"; sha256="1fvbl5i07f6kdwjhirjla4kc1rrmrm8blvn8aa79s87ljagg0ql9"; depends=[devtools]; }; wskm = derive2 { name="wskm"; version="1.4.28"; sha256="0d9hcriakg6fxzc8wjsahc4zkyjza31mb9dv2h4xcf8298xa96i4"; depends=[clv lattice latticeExtra]; }; wsrf = derive2 { name="wsrf"; version="1.7.17"; sha256="0gmlvfcy2iqa5sqhwps3hx0hl9fir8nf5xq62f25sn8i3llw752z"; depends=[Rcpp]; }; wtest = derive2 { name="wtest"; version="2.0"; sha256="16fprxy8lxvipzynxbbs2ras8wflc4g4p1x1439ym1xkg2vwys9a"; depends=[]; }; + wtss = derive2 { name="wtss"; version="1.0.0"; sha256="041686mnhqcljxm3ska35mslpq30ah47anvnmrgnkx5y05pwa8pj"; depends=[jsonlite lubridate RCurl roxygen2 zoo]; }; + wunderscraper = derive2 { name="wunderscraper"; version="0.1.0"; sha256="1h9nhxvs673n2ivw466qm77k20541cwgmmq35iv3dcb3hvw36p0r"; depends=[httr jsonlite sf tigris]; }; wux = derive2 { name="wux"; version="2.2-1"; sha256="0iw0kf0wfspnpc83v7gxhcakmp0z34cccnm0jn9c2za9ay9l2swv"; depends=[abind class corpcor fields gdata Hmisc ncdf4 reshape rgdal rgeos rworldmap sp stringr]; }; wvtool = derive2 { name="wvtool"; version="1.0"; sha256="0x9awj6g5lzqp2lhwgh9ib7jmfdzyhwazrjvw1vwacqqfhbz8qxv"; depends=[]; }; x_ent = derive2 { name="x.ent"; version="1.1.7"; sha256="15qra77dqhj27g3qx92gram4mq4n9fdidygdpvxfmcx7ww3vc6yh"; depends=[ggplot2 jsonlite statmod stringr xtable]; }; - x12 = derive2 { name="x12"; version="1.8.0"; sha256="1pw1dp9prdik6ffh89p3dfq4iciwyfha7sxpyildi726dr8gmkhm"; depends=[stringr x13binary]; }; + x12 = derive2 { name="x12"; version="1.9.0"; sha256="0hrcw1d52yp5rr4r120lcnfxw2rgs95njg37m28blcnfbq2flfc2"; depends=[stringr x13binary]; }; x12GUI = derive2 { name="x12GUI"; version="0.13.0"; sha256="1mga7g9gwb3nv2qs27lz4n9rp6j3svads28hql88sxaif6is3nk1"; depends=[cairoDevice Hmisc lattice RGtk2 stringr x12]; }; x13binary = derive2 { name="x13binary"; version="1.1.39-1"; sha256="1v6slh5136av3l7bk99a57gj6i6khx2j55qv4pyz1zmrzzgaayyc"; depends=[]; }; xLLiM = derive2 { name="xLLiM"; version="2.1"; sha256="1q6ryw9z5wi0amv5f4drz14p36zy8gc2a0s59q10jixhhyas7ycl"; depends=[abind capushe corpcor igraph MASS Matrix]; }; xSub = derive2 { name="xSub"; version="0.0.1"; sha256="0ccvkdylsia8qkfjlbbyggpy4l8z3r05cmvp4xb3j4628fa82jav"; depends=[countrycode haven RCurl]; }; xVA = derive2 { name="xVA"; version="0.8.1"; sha256="0wr4i37sya5gg6v63ka16g9077gxbhvjqyqfaahhban8skzl2adf"; depends=[SACCR Trading]; }; - xaringan = derive2 { name="xaringan"; version="0.4"; sha256="1yc6wgn3x25csl8sk0xl2v5ddw5hz1h0hqqxqxnz8f7hf5hkg9mg"; depends=[htmltools knitr rmarkdown servr]; }; + xaringan = derive2 { name="xaringan"; version="0.6"; sha256="0jgdixgbkwp9jnvjnrzdmlawz8f24z8in56cma3hn79glbvxfaw4"; depends=[htmltools knitr rmarkdown servr xfun]; }; xbreed = derive2 { name="xbreed"; version="1.0.1"; sha256="0grrfra9j0k3mqikmrif5qawh4260ayr40irskzpp9ywsixim63h"; depends=[BGLR]; }; xergm = derive2 { name="xergm"; version="1.8.2"; sha256="0rg8b0r27nzjnf0zkwfbkw96439h0b40k1l5lqi5igyr0bm7w0cc"; depends=[btergm GERGM rem tnam xergm_common]; }; xergm_common = derive2 { name="xergm.common"; version="1.7.7"; sha256="0nfls8a1knmnjjrrw0q93qsfrrb9p3yqsm5dxp13z0780vrzxvcj"; depends=[ergm network]; }; - xesreadR = derive2 { name="xesreadR"; version="0.2.1"; sha256="0q932zkrsg20nchbjf0yynq6c3j6jgslag5n77jc3fdzadk6yf6r"; depends=[bupaR data_table dplyr lubridate purrr stringr tidyr XML xml2]; }; - xgboost = derive2 { name="xgboost"; version="0.6-4"; sha256="1vfiz44prcjx2y442zc4x1b50k57qwd7sqbz6lq0kiqhp78ivicz"; depends=[data_table magrittr Matrix stringi]; }; + xesreadR = derive2 { name="xesreadR"; version="0.2.2"; sha256="1y7iilqdj9jv5snzylihs996hvpcj9s3yaiy7wr20m5yh1ngwkvj"; depends=[bupaR data_table dplyr lubridate purrr stringr tidyr XML xml2]; }; + xfun = derive2 { name="xfun"; version="0.1"; sha256="1sm51gmwgw876d6d1q8smxmfgfh6zsnykfx8qp8z6jmh0fvd89pj"; depends=[]; }; + xgboost = derive2 { name="xgboost"; version="0.6.4.1"; sha256="0n47xvsrk8f8gy2x33rf93yfpkk4ir4z06f09qhlnrnpq1dvwfzf"; depends=[data_table magrittr Matrix stringi]; }; xgobi = derive2 { name="xgobi"; version="1.2-15"; sha256="03ym5mm16rb1bdwrymr393r3xgprp0ign45ryym3g0x2zi8dy557"; depends=[]; }; xhmmScripts = derive2 { name="xhmmScripts"; version="1.1"; sha256="1qryyb34jx9c64l8bnwp40b08y81agdj5w0icj8dk052x50ip1hl"; depends=[gplots plotrix]; }; xkcd = derive2 { name="xkcd"; version="0.0.5"; sha256="1cq4n7w4adj24qq658z15jkqvrn4pd5abxpcsdkzb2cq98m69iis"; depends=[extrafont ggplot2 Hmisc]; }; @@ -11856,35 +12100,36 @@ in with self; { xltabr = derive2 { name="xltabr"; version="0.1.2"; sha256="0pwbpcdiqkhvzxsi6yxly4zza12bw7zc7ji8cvhldw4yl5sxkz1l"; depends=[magrittr openxlsx]; }; xlutils3 = derive2 { name="xlutils3"; version="0.1.0"; sha256="1cxishi62bd36zlsy5qhzix1p68akdf9kpjg9gfm9aqpcijzccb9"; depends=[magrittr readxl]; }; xmeta = derive2 { name="xmeta"; version="1.1-4"; sha256="1y9jldi8qn4jpr05g8fnvb23gig180hh36pc2v4y8n8289s9yvg2"; depends=[aod glmmML metafor mvmeta numDeriv]; }; - xml2 = derive2 { name="xml2"; version="1.1.1"; sha256="05iifrcgzx53w5ciw8bbm4vdwc3giv4xsvazv8chqxkndfvf7wq0"; depends=[BH Rcpp]; }; + xml2 = derive2 { name="xml2"; version="1.2.0"; sha256="154lmksfiwkhnlmryas25mjhfg6k4mmnnk7bbb29mnn5x5pr2yha"; depends=[Rcpp]; }; xmlparsedata = derive2 { name="xmlparsedata"; version="1.0.1"; sha256="0q9d4l3p4ypc0qswnjwrd3as9bx9f1niixsc19y1msva51sg5h39"; depends=[]; }; + xmrr = derive2 { name="xmrr"; version="1.0.1"; sha256="0h5861mym7k7xkby6zilcxq8i3yr06kcaam5pzi2y0q85iycb88f"; depends=[dplyr ggplot2 tidyr]; }; xoi = derive2 { name="xoi"; version="0.66-9"; sha256="1kd9s9afq5shsaqhrxai9yz60a9imyy5np76fjpkjgyz56kbk6nr"; depends=[qtl]; }; - xpose = derive2 { name="xpose"; version="0.4.0"; sha256="17h7wiz9h1fy7fgs90s9nd4idpqar2d1mpypagxwy3swwldppvqv"; depends=[dplyr ggforce ggplot2 gridExtra purrr readr rlang stringr tibble tidyr vpc]; }; + xpose = derive2 { name="xpose"; version="0.4.2"; sha256="11k07z76fpp4fvp3kfx1jc7bx1mwc1xfwyp46xwfhgfbazbvyfd7"; depends=[dplyr ggforce ggplot2 purrr readr rlang stringr tibble tidyr vpc]; }; xpose4 = derive2 { name="xpose4"; version="4.6.0"; sha256="1pyzpb6ddvpm3nx49brkam6afzhvf7jg8xnijg9jwd2qfijp8lav"; depends=[dplyr gam Hmisc lattice lazyeval readr survival]; }; - xray = derive2 { name="xray"; version="0.1"; sha256="1awhkj22wcchw8g6wlxmx0pdmgi01vgns6abnbjhk1dxzq5vcb7g"; depends=[dplyr foreach ggplot2 lubridate scales]; }; + xptr = derive2 { name="xptr"; version="1.1"; sha256="12yvgbwm311hap3kk24wdx5zz084h0lhkj9k10mjzqp4a6aayi88"; depends=[]; }; + xray = derive2 { name="xray"; version="0.2"; sha256="1ibj92ljlj8a5rmbrci691yhpd4kwrfyl944nzl2dcbf58l01dzq"; depends=[dplyr foreach ggplot2 lubridate scales]; }; xseq = derive2 { name="xseq"; version="0.2.1"; sha256="0bsakbfvkfv39q2ch2g21b17g84470sq4v73355cljlshsi6404i"; depends=[e1071 gptk impute preprocessCore RColorBrewer sfsmisc]; }; xslt = derive2 { name="xslt"; version="1.3"; sha256="0giqzmdby9ax8gwx9b7xqka28k3hgymv4289k8p8dvg26d683p3l"; depends=[Rcpp xml2]; }; xsp = derive2 { name="xsp"; version="0.1.2"; sha256="1jbmxa234v52qji8sz4bkg24c2n65b0zh9py1wyyfzw9n1wx5w0r"; depends=[ggplot2 reshape2]; }; xtable = derive2 { name="xtable"; version="1.8-2"; sha256="0398qkpvlw3dv0myz4mjcyqwpwc2m31l127r8vdzwc71wb6s28qn"; depends=[]; }; xtal = derive2 { name="xtal"; version="1.15"; sha256="1zq3vd5x3vw6acn47yd2x7kflr9sm3znmdkm68cs64ha54jbl3vs"; depends=[]; }; - xtensor = derive2 { name="xtensor"; version="0.3.0-0"; sha256="096bxq92wy3y3q2pqkfhbwrimsp7qhvfj8nmkmfyqy943lydzrzd"; depends=[Rcpp]; }; xtermStyle = derive2 { name="xtermStyle"; version="3.0.5"; sha256="1q4qq8w4sgxbbb1x0i4k5xndvwisvjszg830wspwb37wigxz8xvz"; depends=[]; }; - xtractomatic = derive2 { name="xtractomatic"; version="3.3.2"; sha256="10a1apsjqg0cpr267g5336cl6qr3ax03jcl234l9a8b2nh8sbwi5"; depends=[httr ncdf4 sp]; }; - xts = derive2 { name="xts"; version="0.10-0"; sha256="1w7lxy3hbf005fvpzbwiznj8jbxi07s4189vbgxisd35l9a4v6q4"; depends=[zoo]; }; - xwf = derive2 { name="xwf"; version="0.1-1"; sha256="0jvcccwyhvrmcg5aimn4y4kglkz7yvz49rivz6nzvfwaa5gvxqgw"; depends=[mgcv]; }; + xtractomatic = derive2 { name="xtractomatic"; version="3.4.1"; sha256="189lya8ijm8vxjki76gjdhv1nyp3860ydpzg5ij12ggd5qqn1zgy"; depends=[dplyr httr ncdf4 readr sp]; }; + xts = derive2 { name="xts"; version="0.10-1"; sha256="1j9ddh9v9081zrqlpylsk13fldilhjdyaw6r6pa726fhgnrsf8a2"; depends=[zoo]; }; + xwf = derive2 { name="xwf"; version="0.2-1"; sha256="1g94wbsq8flnkxxfxx6yg87siiwpyrx219an9a2cf1blnwjv9b68"; depends=[mgcv]; }; xxIRT = derive2 { name="xxIRT"; version="2.0.3"; sha256="10n9rrhp0v71gmn0s2l2qi6sfplwj7anydw6rxqk409wg5is3x93"; depends=[dplyr ggplot2 lpSolveAPI magrittr reshape2]; }; xyloplot = derive2 { name="xyloplot"; version="1.5"; sha256="0h90070m3xgcfky5q6vx6l2lfz0ihwbp2xg25mgmbijz4kg3n9d3"; depends=[]; }; xyz = derive2 { name="xyz"; version="0.2"; sha256="13w4sb4pvgciwr8wsz785dafj2k2kpx7znz46r5d32wx88vkycp4"; depends=[Rcpp]; }; yCrypticRNAs = derive2 { name="yCrypticRNAs"; version="0.99.2"; sha256="130zp8na3d50b49bcsqzsmjy2sif865h6vfpc5zmp1fhvkyykkfd"; depends=[biomaRt data_table IRanges mclust MESS Rcpp Rsamtools]; }; - yaImpute = derive2 { name="yaImpute"; version="1.0-26"; sha256="00w127wnwnhkfkrn4764l1ap3d3njlidglk9izcxm0n4kqj0zb49"; depends=[]; }; + yaImpute = derive2 { name="yaImpute"; version="1.0-29"; sha256="1zxl4l54y9f9lmi17hlhsbsc4f1qb0dnnl5dg9frhq6bhw2lqxqb"; depends=[]; }; yacca = derive2 { name="yacca"; version="1.1"; sha256="0wg2wgvh1najmccmgzyigj11mshrdb8w4r2pqq360dracpn0ak6x"; depends=[]; }; yakmoR = derive2 { name="yakmoR"; version="0.1.1"; sha256="09aklz79s0911p2wnpd7gc6vrbr9lmiskhkahsc63pdigggmq9f7"; depends=[BBmisc checkmate Rcpp]; }; - yaml = derive2 { name="yaml"; version="2.1.14"; sha256="0x88xicrf7vwp77xgan27mnpdljhpkn0pz5kphnwqi3ddy25k9a1"; depends=[]; }; + yaml = derive2 { name="yaml"; version="2.1.16"; sha256="1xlsmqal607w6c9rx86061y1fwpbyd5lqp9bad5n7cc9a0blpnkm"; depends=[]; }; yardstick = derive2 { name="yardstick"; version="0.0.1"; sha256="165czwi62nrhhci06fb0rfpk2gki94aiyl4wlflmgpzmspmgz7m8"; depends=[broom dplyr MLmetrics pROC rlang tibble tidyr tidyselect]; }; yarrr = derive2 { name="yarrr"; version="0.1.5"; sha256="1258bj7x4icaxfabnnd3fgwydnqbzxkih7zw0sdlwdax3q8fw5c5"; depends=[BayesFactor circlize jpeg]; }; yasp = derive2 { name="yasp"; version="0.1.0"; sha256="082w1l0892v0vrvfmc1ssgy9ccj30hcrg7m56x61spgcmckfshy4"; depends=[]; }; ycinterextra = derive2 { name="ycinterextra"; version="0.1"; sha256="0hr37izbbmxqkjy6a7q8vcn0vs8an1ck9y8xfjpl5z0rygi8xc1v"; depends=[mcGlobaloptim]; }; - yearn = derive2 { name="yearn"; version="0.1.1"; sha256="12dnf856sbsksmb83975nfpgkyv0yw8fny2c89pfgg6ivm0sxy6a"; depends=[BiocInstaller devtools githubinstall]; }; + yearn = derive2 { name="yearn"; version="0.1.3"; sha256="03aqbf3q0nhg73pqpwlqdhpbmfa0rvv78b84b4mqir43601vjx65"; depends=[BiocInstaller devtools githubinstall]; }; yesno = derive2 { name="yesno"; version="0.0.2"; sha256="0aa8kqcqlix9a9a2l4fnl2qv25dgdn4m7cfsh7m0kk76y8q5gbc9"; depends=[]; }; yhat = derive2 { name="yhat"; version="2.0-0"; sha256="0vdhkknmms7zy7iha894jn1hr1h5w67pr53r0q67m7p404w21iza"; depends=[boot miscTools plotrix yacca]; }; yhatr = derive2 { name="yhatr"; version="0.15.1"; sha256="18g2cr1kjxnfw6cwzl62ynppfv1zz732kbx18zq8918l85kx6wbw"; depends=[httr jsonlite stringr]; }; @@ -11896,28 +12141,29 @@ in with self; { zCompositions = derive2 { name="zCompositions"; version="1.1.1"; sha256="1j6v7mfxhn67mr3q6cvcjj9pqc8a02w114z8q74h3l6jw8ahjg6m"; depends=[MASS NADA truncnorm]; }; zFactor = derive2 { name="zFactor"; version="0.1.7"; sha256="0vsjafg65qydfz0j75rrw40si5v2hwbf09z6d58wzffrwzgrwpvd"; depends=[data_table dplyr ggplot2 rootSolve tibble tidyr]; }; zTree = derive2 { name="zTree"; version="1.0.4"; sha256="058vjvxn1lw07nxw8rs1b8vnw6ccxh3swrmvjicvr35xmakj8qa0"; depends=[plyr]; }; - zeallot = derive2 { name="zeallot"; version="0.0.6"; sha256="16kvi3j2pf39c0xsx6hhhwjm2ljr45hb357v8nvjvhsx8bk1vf9g"; depends=[]; }; + zeallot = derive2 { name="zeallot"; version="0.1.0"; sha256="1sd1igcfnv27pa3bqxlbyxchi562h7grnjg1l7wxx3bwr49i57s3"; depends=[]; }; zebu = derive2 { name="zebu"; version="0.1.2"; sha256="0f9fsb4z8s7k5jnz2ayd52dzri0z46kjbm0gi5rfqjlmk13bhgk4"; depends=[foreach ggplot2 iterators plyr reshape2]; }; zeligverse = derive2 { name="zeligverse"; version="0.1.1"; sha256="1hf3hbgzdlhhyy2gvg984dwp8d0qm0ziyn8i9h5x00gwf74vn9dr"; depends=[Amelia dplyr MatchIt purrr rstudioapi tibble WhatIf Zelig ZeligChoice ZeligEI]; }; zendeskR = derive2 { name="zendeskR"; version="0.4"; sha256="06cjwk08w3x6dx717123psinid5bx6c563jnfn890373jw6xnfrk"; depends=[RCurl rjson]; }; - zenplots = derive2 { name="zenplots"; version="0.0-1"; sha256="0agm81rrn4ip6sljrwm1a9i2q9rwdwamnxm0smz757kypgyll8c2"; depends=[graph MASS PairViz]; }; + zenplots = derive2 { name="zenplots"; version="0.0-2"; sha256="09dp2d89wnvvqkfz7w1fzs8gyq7ryyxsn2h5mgzbm1spd3dmychw"; depends=[graph loon MASS PairViz]; }; zetadiv = derive2 { name="zetadiv"; version="1.0.1"; sha256="0a50xj7bgb2w3yx2ghpwq2y2hkilxx0dchhscspzjalyw77jhxvp"; depends=[car glm2 Imap mgcv nnls scam vegan]; }; zfa = derive2 { name="zfa"; version="1.0"; sha256="0lddwpifkzggzvy56ans5pfknfr8laxcg264f3ph2z150gw1plsh"; depends=[SKAT]; }; zic = derive2 { name="zic"; version="0.9.1"; sha256="1vd64ljigf6iwgzlgdxgj65nlwir176h7ddznddpaz2abh6n6zwp"; depends=[coda Rcpp RcppArmadillo]; }; zip = derive2 { name="zip"; version="1.0.0"; sha256="0rgr9pcdhdq3k8n29h2ircp3ri1ibhrx81gja1y7331v15xyrabg"; depends=[]; }; zipcode = derive2 { name="zipcode"; version="1.0"; sha256="1lvlf1h5fv412idpdssjfh4fki933dm5nhr41ppl1mf45b9j7azn"; depends=[]; }; zipfR = derive2 { name="zipfR"; version="0.6-10"; sha256="16h5saj0b2qm3qwd7arzamn0n05hn31ybgzq4pb10ri0ajs1cvic"; depends=[]; }; - ziphsmm = derive2 { name="ziphsmm"; version="1.0.8"; sha256="1d206pg85q9fxc6wiaw0179g5gfcwckqwifx26xfxkv15rbhyp9s"; depends=[Rcpp RcppArmadillo]; }; - zoeppritz = derive2 { name="zoeppritz"; version="1.0-6"; sha256="0b16w8s26pi5h911jizwqapgwhdh60gcx0khn3kayf9fi40kyzp0"; depends=[]; }; + ziphsmm = derive2 { name="ziphsmm"; version="2.0.1"; sha256="1q1ack3b6ppyp946f56lhrad1839dzv36qsk58czym46pbpdid4l"; depends=[Rcpp RcppArmadillo]; }; + zoeppritz = derive2 { name="zoeppritz"; version="1.0-7"; sha256="14j9jl2g7gn94nzs96mwsgwlxnfbr1crjfmfwbi3rk367xi197jb"; depends=[]; }; zoib = derive2 { name="zoib"; version="1.4.2"; sha256="0gdbcnxlm9m88c2av4zy0k3yvm2cvg24804xnsi0mwfgwmnngdh5"; depends=[abind coda Formula matrixcalc rjags]; }; - zonator = derive2 { name="zonator"; version="0.5.8"; sha256="1slpyg8h5vb695gf31z66m4isibvckbk7b19vbl8s5svgh7ddl12"; depends=[ggplot2 raster RColorBrewer reshape2 rgdal]; }; - zoo = derive2 { name="zoo"; version="1.8-0"; sha256="0mqklbx92ifwa0awm7gpm4r9dvwa09p55zjxjnypiqsxy532r4h9"; depends=[lattice]; }; + zonator = derive2 { name="zonator"; version="0.5.9"; sha256="04gjrm9nxnxsigrc30zghmv37ijsx27134hfnrbm51smw2y60dm4"; depends=[ggplot2 raster RColorBrewer reshape2 rgdal]; }; + zoo = derive2 { name="zoo"; version="1.8-1"; sha256="16nc5jnpkf5j9vgq3pzssv7knj30mi055wj7q3sygz3l0d88hgfr"; depends=[lattice]; }; zooaRch = derive2 { name="zooaRch"; version="1.2"; sha256="0grc378xppv0303sf4flfqz5002vq5a23nzbq4bsff41rww7dihc"; depends=[ggplot2]; }; zooaRchGUI = derive2 { name="zooaRchGUI"; version="1.0.2"; sha256="0snggx0d69ajz6xxwnv03l12jpjrjkpy2dgf4lrpm2l8rspd27i4"; depends=[car coda foreign geomorph ggplot2 MASS pgirmess raster readxl rjags sp spdep splancs tcltk2 tkrplot vegan]; }; zoocat = derive2 { name="zoocat"; version="0.2.0"; sha256="1xqi90jnpqjdf3zr4pldh1a2gjppjwjrgkq71rvdhmcrf5s8jav0"; depends=[plyr reshape2 scales zoo]; }; zooimage = derive2 { name="zooimage"; version="3.0-5"; sha256="1r3slmyw0dyqfa40dr5xga814z09ibhmmby8p1cii5lh61xm4c39"; depends=[filehash jpeg mlearning png svDialogs svMisc]; }; zoom = derive2 { name="zoom"; version="2.0.4"; sha256="03f5rxfr6ncf1j6vpn7pip21q7ylj4bx0a5xphqb6x6i33lxf1g5"; depends=[]; }; - zoon = derive2 { name="zoon"; version="0.6"; sha256="0dyl8fnzjncxb9q322xsdmvbm0wwzl1w9750vmvndpd8c05qi1n0"; depends=[dismo plyr randomForest raster RCurl rfigshare rgdal roxygen2 SDMTools sp testthat]; }; + zoon = derive2 { name="zoon"; version="0.6.3"; sha256="11accyiv9n2zk7fq5bapbmv1ixadab19666i8w41bw642lafgivq"; depends=[dismo plyr randomForest raster RCurl rfigshare rgdal roxygen2 rworldmap SDMTools sp testthat]; }; + zscorer = derive2 { name="zscorer"; version="0.1.0"; sha256="1199d72v9hm7k5jnll2ngn3jlfsiaxrrpbqzrkl0fghm6wnxcc6h"; depends=[]; }; zstdr = derive2 { name="zstdr"; version="0.1.1"; sha256="1rigsdh0f68l6vvvxp277cp8hbxj10x4588s6az1njxfpxrc8ajj"; depends=[Rcpp]; }; ztable = derive2 { name="ztable"; version="0.1.5"; sha256="1jfqnqy9544gfvz3bsb48v4177nwp4b4n9l2743asq8sbq305b5r"; depends=[]; }; ztype = derive2 { name="ztype"; version="0.1.0"; sha256="0brbq2rgkl4mhjbb70kkfv47lzs66k9ppfs2klavcbripirxn5fx"; depends=[assertthat dplyr ggplot2 lubridate magrittr rvest stringr]; }; diff --git a/pkgs/development/r-modules/default.nix b/pkgs/development/r-modules/default.nix index ee1fb24b3098..e81ce35977e1 100644 --- a/pkgs/development/r-modules/default.nix +++ b/pkgs/development/r-modules/default.nix @@ -42,16 +42,17 @@ let # from the name, version, sha256, and optional per-package arguments above # deriveBioc = mkDerive { - mkHomepage = {name, rVersion}: "https://bioconductor.org/packages/${rVersion}/bioc/html/${name}.html"; - mkUrls = {name, version, rVersion}: [ "mirror://bioc/${rVersion}/bioc/src/contrib/${name}_${version}.tar.gz" ]; + mkHomepage = {name, biocVersion}: "https://bioconductor.org/packages/${biocVersion}/bioc/html/${name}.html"; + mkUrls = {name, version, biocVersion}: [ "mirror://bioc/${biocVersion}/bioc/src/contrib/${name}_${version}.tar.gz" + "mirror://bioc/${biocVersion}/bioc/src/contrib/Archive/${name}_${version}.tar.gz" ]; }; deriveBiocAnn = mkDerive { - mkHomepage = {name, rVersion}: "http://www.bioconductor.org/packages/${name}.html"; - mkUrls = {name, version, rVersion}: [ "mirror://bioc/${rVersion}/data/annotation/src/contrib/${name}_${version}.tar.gz" ]; + mkHomepage = {name, biocVersion}: "http://www.bioconductor.org/packages/${name}.html"; + mkUrls = {name, version, biocVersion}: [ "mirror://bioc/${biocVersion}/data/annotation/src/contrib/${name}_${version}.tar.gz" ]; }; deriveBiocExp = mkDerive { - mkHomepage = {name, rVersion}: "http://www.bioconductor.org/packages/${name}.html"; - mkUrls = {name, version, rVersion}: [ "mirror://bioc/${rVersion}/data/experiment/src/contrib/${name}_${version}.tar.gz" ]; + mkHomepage = {name, biocVersion}: "http://www.bioconductor.org/packages/${name}.html"; + mkUrls = {name, version, biocVersion}: [ "mirror://bioc/${biocVersion}/data/experiment/src/contrib/${name}_${version}.tar.gz" ]; }; deriveCran = mkDerive { mkHomepage = {name, snapshot}: "http://mran.revolutionanalytics.com/snapshot/${snapshot}/web/packages/${name}/"; @@ -230,6 +231,7 @@ let packagesWithNativeBuildInputs = { abn = [ pkgs.gsl_1 ]; adimpro = [ pkgs.imagemagick ]; + animation = [ pkgs.which ]; audio = [ pkgs.portaudio ]; BayesSAE = [ pkgs.gsl_1 ]; BayesVarSel = [ pkgs.gsl_1 ]; @@ -313,7 +315,7 @@ let RGtk2 = [ pkgs.gtk2.dev ]; rhdf5 = [ pkgs.zlib ]; Rhpc = [ pkgs.zlib pkgs.bzip2.dev pkgs.icu pkgs.lzma.dev pkgs.openmpi pkgs.pcre.dev ]; - Rhtslib = [ pkgs.zlib.dev ]; + Rhtslib = [ pkgs.zlib.dev pkgs.automake pkgs.autoconf ]; RJaCGH = [ pkgs.zlib.dev ]; rjags = [ pkgs.jags ]; rJava = [ pkgs.zlib pkgs.bzip2.dev pkgs.icu pkgs.lzma.dev pkgs.pcre.dev pkgs.jdk pkgs.libzip ]; @@ -350,7 +352,6 @@ let simplexreg = [ pkgs.gsl_1 ]; SOD = [ pkgs.opencl-headers ]; spate = [ pkgs.fftw.dev ]; - sprint = [ pkgs.openmpi ]; ssanv = [ pkgs.proj ]; stsm = [ pkgs.gsl_1 ]; stringi = [ pkgs.icu.dev ]; @@ -368,7 +369,7 @@ let VBmix = [ pkgs.gsl_1 pkgs.fftw pkgs.qt4 ]; WhopGenome = [ pkgs.zlib.dev ]; XBRL = [ pkgs.zlib pkgs.libxml2.dev ]; - xml2 = [ pkgs.libxml2.dev ]; + xml2 = [ pkgs.libxml2.dev ] ++ lib.optionals stdenv.isDarwin [ pkgs.perl ]; XML = [ pkgs.libtool pkgs.libxml2.dev pkgs.xmlsec pkgs.libxslt ]; affyPLM = [ pkgs.zlib.dev ]; bamsignals = [ pkgs.zlib.dev ]; @@ -384,7 +385,6 @@ let affyio = [ pkgs.zlib.dev ]; VariantAnnotation = [ pkgs.zlib.dev ]; snpStats = [ pkgs.zlib.dev ]; - gputools = [ pkgs.pcre.dev pkgs.lzma.dev pkgs.zlib.dev pkgs.bzip2.dev pkgs.icu.dev ]; }; packagesWithBuildInputs = { @@ -398,7 +398,6 @@ let RPushbullet = [ pkgs.which ]; qtpaint = [ pkgs.cmake ]; qtbase = [ pkgs.cmake pkgs.perl ]; - gmatrix = [ pkgs.cudatoolkit pkgs.which ]; RCurl = [ pkgs.curl.dev ]; R2SWF = [ pkgs.pkgconfig ]; rggobi = [ pkgs.pkgconfig ]; @@ -412,6 +411,7 @@ let fftw = [ pkgs.pkgconfig ]; geoCount = [ pkgs.pkgconfig ]; gdtools = [ pkgs.pkgconfig ]; + JuniperKernel = lib.optionals stdenv.isDarwin [ pkgs.binutils.bintools ]; kza = [ pkgs.pkgconfig ]; magick = [ pkgs.pkgconfig ]; mwaved = [ pkgs.pkgconfig ]; @@ -427,12 +427,10 @@ let tesseract = [ pkgs.pkgconfig ]; Cairo = [ pkgs.pkgconfig ]; Rsymphony = [ pkgs.pkgconfig pkgs.doxygen pkgs.graphviz pkgs.subversion ]; - qtutils = [ pkgs.qt4 ]; tcltk2 = [ pkgs.tcl pkgs.tk ]; tikzDevice = [ pkgs.which pkgs.texlive.combined.scheme-medium ]; rPython = [ pkgs.which ]; gridGraphics = [ pkgs.which ]; - gputools = [ pkgs.which pkgs.cudatoolkit ]; adimpro = [ pkgs.which pkgs.xorg.xdpyinfo ]; PET = [ pkgs.which pkgs.xorg.xdpyinfo pkgs.imagemagick ]; dti = [ pkgs.which pkgs.xorg.xdpyinfo pkgs.imagemagick ]; @@ -498,7 +496,6 @@ let "EnQuireR" "eVenn" "exactLoglinTest" - "FAiR" "fat2Lpoly" "fbati" "FD" @@ -519,7 +516,6 @@ let "geoR" "geoRglm" "georob" - "GeoXp" "GGEBiplotGUI" "gnm" "GPCSIV" @@ -535,7 +531,6 @@ let "HH" "HiveR" "HomoPolymer" - "iBUGS" "ic50" "iDynoR" "in2extRemes" @@ -591,10 +586,8 @@ let "prefmod" "PrevMap" "ProbForecastGOP" - "QCAGUI" "qtbase" "qtpaint" - "qtutils" "R2STATS" "r4ss" "RandomFields" @@ -700,16 +693,11 @@ let packagesToSkipCheck = [ "Rmpi" # tries to run MPI processes - "gmatrix" # requires CUDA runtime - "gputools" # requires CUDA runtime - "sprint" # tries to run MPI processes "pbdMPI" # tries to run MPI processes ]; # Packages which cannot be installed due to lack of dependencies or other reasons. brokenPackages = [ - "gputools" # depends on non-free cudatoolkit-8.0.61 - "gmatrix" # depends on non-free cudatoolkit-8.0.61 ]; otherOverrides = old: new: { @@ -773,6 +761,17 @@ let ''; }); + JuniperKernel = old.JuniperKernel.overrideDerivation (attrs: { + postPatch = '' + for file in {R,src}/*.R; do + sed -i 's#system("which \(otool\|install_name_tool\)"[^)]*)#"${pkgs.binutils.bintools}/bin/\1"#g' $file + done + ''; + preConfigure = '' + patchShebangs configure + ''; + }); + Mposterior = old.Mposterior.overrideDerivation (attrs: { PKG_LIBS = "-L${pkgs.openblasCompat}/lib -lopenblas"; }); @@ -840,15 +839,6 @@ let patches = [ ./patches/spMC.patch ]; }); - BayesLogit = old.BayesLogit.overrideDerivation (attrs: { - patches = [ ./patches/BayesLogit.patch ]; - buildInputs = (attrs.buildInputs or []) ++ [ pkgs.openblasCompat ]; - }); - - BayesBridge = old.BayesBridge.overrideDerivation (attrs: { - patches = [ ./patches/BayesBridge.patch ]; - }); - openssl = old.openssl.overrideDerivation (attrs: { PKGCONFIG_CFLAGS = "-I${pkgs.openssl.dev}/include"; PKGCONFIG_LIBS = "-Wl,-rpath,${pkgs.openssl.out}/lib -L${pkgs.openssl.out}/lib -lssl -lcrypto"; diff --git a/pkgs/development/r-modules/generate-r-packages.R b/pkgs/development/r-modules/generate-r-packages.R index 8dc3a50abec5..6614116a3bf6 100755 --- a/pkgs/development/r-modules/generate-r-packages.R +++ b/pkgs/development/r-modules/generate-r-packages.R @@ -3,12 +3,12 @@ library(data.table) library(parallel) cl <- makeCluster(10) -rVersion <- paste(R.Version()$major, strsplit(R.Version()$minor, ".", fixed=TRUE)[[1]][1], sep=".") +biocVersion <- 3.6 snapshotDate <- Sys.Date()-1 -mirrorUrls <- list( bioc=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", rVersion, "/bioc/src/contrib/") - , "bioc-annotation"=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", rVersion, "/data/annotation/src/contrib/") - , "bioc-experiment"=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", rVersion, "/data/experiment/src/contrib/") +mirrorUrls <- list( bioc=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", biocVersion, "/bioc/src/contrib/") + , "bioc-annotation"=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", biocVersion, "/data/annotation/src/contrib/") + , "bioc-experiment"=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", biocVersion, "/data/experiment/src/contrib/") , cran=paste0("http://mran.revolutionanalytics.com/snapshot/", snapshotDate, "/src/contrib/") ) @@ -81,7 +81,7 @@ cat("{ self, derive }:\n") cat("let derive2 = derive ") if (mirrorType == "cran") { cat("{ snapshot = \"", paste(snapshotDate), "\"; }", sep="") } else if (mirrorType == "irkernel") { cat("{}") -} else { cat("{ rVersion = \"", rVersion, "\"; }", sep="") } +} else { cat("{ biocVersion = \"", biocVersion, "\"; }", sep="") } cat(";\n") cat("in with self; {\n") cat(paste(nix, collapse="\n"), "\n", sep="") diff --git a/pkgs/development/r-modules/patches/BayesBridge.patch b/pkgs/development/r-modules/patches/BayesBridge.patch deleted file mode 100644 index 2fb0392bf3e9..000000000000 --- a/pkgs/development/r-modules/patches/BayesBridge.patch +++ /dev/null @@ -1,9 +0,0 @@ -diff -ru -x '*~' BayesBridge_orig/src/Makevars BayesBridge/src/Makevars ---- BayesBridge_orig/src/Makevars 2014-07-19 05:08:55.000000000 +0900 -+++ BayesBridge/src/Makevars 2014-10-25 18:35:01.398539305 +0900 -@@ -9,4 +9,4 @@ - # PKG_CPPFLAGS = -DUSE_R -DDISABLE_FIO -I../inst/include/ -DDISABLE_SINGLE -DNTHROW - PKG_CPPFLAGS = -DUSE_R -DDISABLE_FIO -DDISABLE_SINGLE -DNTHROW - # PKG_CPPFLAGS = -DUSE_R -DDISABLE_SINGLE -DNTHROW -Wall -pedantic -Wshadow -ansi -Wsequence-point --PKG_LIBS = $(BLAS_LIBS) $(FLIBS) $(LAPACK_LIBS) -+PKG_LIBS = $(LAPACK_LIBS) $(BLAS_LIBS) $(FLIBS) diff --git a/pkgs/development/r-modules/patches/BayesLogit.patch b/pkgs/development/r-modules/patches/BayesLogit.patch deleted file mode 100644 index 83c865e479c2..000000000000 --- a/pkgs/development/r-modules/patches/BayesLogit.patch +++ /dev/null @@ -1,12 +0,0 @@ -diff -ru -x '*~' BayesLogit_orig/src/Makevars BayesLogit/src/Makevars ---- BayesLogit_orig/src/Makevars 2014-04-24 23:31:13.000000000 +0900 -+++ BayesLogit/src/Makevars 2014-10-25 18:33:32.398572641 +0900 -@@ -6,7 +6,7 @@ - ## W/OUT Dynamic Stuff - OBJECTS = Matrix.o MatrixFrame.o RRNG.o RNG.o FSF_nmix.o LogitWrapper.o \ - PolyaGamma.o PolyaGammaAlt.o PolyaGammaSP.o InvertY.o --PKG_LIBS = $(BLAS_LIBS) $(FLIBS) $(LAPACK_LIBS) -+PKG_LIBS = $(LAPACK_LIBS) $(BLAS_LIBS) $(FLIBS) - # PKG_CPPFLAGS = -DUSE_R -DNDEBUG -DDISABLE_SINGLE -DNTHROW -Wall -pedantic -Wextra - PKG_CPPFLAGS = -DUSE_R -DNDEBUG -DDISABLE_SINGLE -DNTHROW - diff --git a/pkgs/development/tools/analysis/massif-visualizer/default.nix b/pkgs/development/tools/analysis/massif-visualizer/default.nix index 99958a416c39..a9793e048839 100644 --- a/pkgs/development/tools/analysis/massif-visualizer/default.nix +++ b/pkgs/development/tools/analysis/massif-visualizer/default.nix @@ -1,6 +1,6 @@ { mkDerivation, lib, fetchurl, - extra-cmake-modules, shared_mime_info, + extra-cmake-modules, shared-mime-info, qtsvg, qtxmlpatterns, karchive, kconfig, kcoreaddons, kparts, kio, ki18n, kdiagram, kgraphviewer }: @@ -14,7 +14,7 @@ mkDerivation rec { sha256 = "0v8z6r9gngzckvqyxjm9kp7hilwfqibyk2f9vag9l98ar0iwr97q"; }; - nativeBuildInputs = [ extra-cmake-modules shared_mime_info ]; + nativeBuildInputs = [ extra-cmake-modules shared-mime-info ]; buildInputs = [ qtsvg qtxmlpatterns karchive kconfig kcoreaddons kparts kio ki18n diff --git a/pkgs/development/tools/build-managers/buildbot/default.nix b/pkgs/development/tools/build-managers/buildbot/default.nix index d62ccd0c9fda..3e994227ef05 100644 --- a/pkgs/development/tools/build-managers/buildbot/default.nix +++ b/pkgs/development/tools/build-managers/buildbot/default.nix @@ -14,11 +14,11 @@ let package = pythonPackages.buildPythonApplication rec { name = "${pname}-${version}"; pname = "buildbot"; - version = "0.9.15.post1"; + version = "1.0.0"; src = pythonPackages.fetchPypi { inherit pname version; - sha256 = "01m5x4lpz90lqf8j0s2c26gqb5yzan6x9d1ffgmrklwf0bljkwni"; + sha256 = "0y7gpymxl09gd9dyqj7zqhaihpl9da1v8ppxi4r161ywd8jv9b1g"; }; buildInputs = with pythonPackages; [ diff --git a/pkgs/development/tools/build-managers/buildbot/pkg.nix b/pkgs/development/tools/build-managers/buildbot/pkg.nix index 8b23f8a24889..07480d15f211 100644 --- a/pkgs/development/tools/build-managers/buildbot/pkg.nix +++ b/pkgs/development/tools/build-managers/buildbot/pkg.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { name = "${pname}-${version}"; pname = "buildbot-pkg"; - version = "0.9.15.post1"; + version = "1.0.0"; src = fetchPypi { inherit pname version; - sha256 = "0gsa5fi1gkwnz8dsrl2s5kzcfawnj3nl8g8h6z1winz627l9n8sh"; + sha256 = "1rs2x0b2v92xfsfk0f2nr9x8lz5baawf768s58brj4jiab6mq312"; }; propagatedBuildInputs = [ setuptools ]; diff --git a/pkgs/development/tools/build-managers/buildbot/plugins.nix b/pkgs/development/tools/build-managers/buildbot/plugins.nix index 40aaad2efd25..1d1b963df993 100644 --- a/pkgs/development/tools/build-managers/buildbot/plugins.nix +++ b/pkgs/development/tools/build-managers/buildbot/plugins.nix @@ -11,7 +11,7 @@ src = pythonPackages.fetchPypi { inherit pname version format; - sha256 = "19cnzp5prima3jrk525xspw7vqc5pjln2nihj4kc3w90dhzllj8x"; + sha256 = "0nmrq50c5ib185rpb8ai1mm7gjq2mjvxik1kqrjfa62i1ia9ikyj"; }; meta = with stdenv.lib; { @@ -29,7 +29,7 @@ src = pythonPackages.fetchPypi { inherit pname version; - sha256 = "1j6aw2j2sl7ix8rb67pbs6nfvv8v3smgkvqzsjsyh5sdfr2663cg"; + sha256 = "1laz7l7cbbz0czb6skxw314bd2qk2f63qw3n2rs7m7v11gd9cdll"; }; propagatedBuildInputs = with pythonPackages; [ buildbot-pkg ]; @@ -49,7 +49,7 @@ src = pythonPackages.fetchPypi { inherit pname version; - sha256 = "0k0wd4rq034bij2flfjv60h8czkfn836bnaa7hwsrl58gxds39m4"; + sha256 = "0mmri8c4n1zwxc1dx2a11yllrmnwqqxjvvil9224lbs98mpchppi"; }; propagatedBuildInputs = with pythonPackages; [ buildbot-pkg ]; @@ -69,7 +69,7 @@ src = pythonPackages.fetchPypi { inherit pname version; - sha256 = "08ng56jmy50s3zyn6wxizji1zhgzhi65z7w3wljg02qrbd5688gj"; + sha256 = "0nwlw2m3qfifia6gy3d4lrnycra50k98ax071p2zjqknanh563vr"; }; propagatedBuildInputs = with pythonPackages; [ buildbot-pkg ]; @@ -89,7 +89,7 @@ src = pythonPackages.fetchPypi { inherit pname version; - sha256 = "15fm72yymv873n3vsw9kprypcf6jzln18v4lb062n8lqw9pykwb1"; + sha256 = "1zml9bd910zwcby4vr3lmzap2grinha2w5zgb2cmixmz7hfrqswp"; }; propagatedBuildInputs = with pythonPackages; [ buildbot-pkg ]; diff --git a/pkgs/development/tools/build-managers/buildbot/worker.nix b/pkgs/development/tools/build-managers/buildbot/worker.nix index 51d6a5b56952..75e6bb0404be 100644 --- a/pkgs/development/tools/build-managers/buildbot/worker.nix +++ b/pkgs/development/tools/build-managers/buildbot/worker.nix @@ -3,11 +3,11 @@ pythonPackages.buildPythonApplication (rec { name = "${pname}-${version}"; pname = "buildbot-worker"; - version = "0.9.15.post1"; + version = "1.0.0"; src = pythonPackages.fetchPypi { inherit pname version; - sha256 = "12zscqb218w88y9fd1jwfn4cr2sw35j998d0jlgd22bch020sy65"; + sha256 = "0ws31ypmksah1c83h4npwg560p8v7n9j6l94p79y5pispjsgzqzl"; }; buildInputs = with pythonPackages; [ setuptoolsTrial mock ]; diff --git a/pkgs/development/tools/build-managers/gradle/default.nix b/pkgs/development/tools/build-managers/gradle/default.nix index bdf446d4d12a..5e8f14c5f843 100644 --- a/pkgs/development/tools/build-managers/gradle/default.nix +++ b/pkgs/development/tools/build-managers/gradle/default.nix @@ -52,12 +52,12 @@ rec { }; gradle_latest = gradleGen rec { - name = "gradle-4.5"; + name = "gradle-4.6"; nativeVersion = "0.14"; src = fetchurl { url = "http://services.gradle.org/distributions/${name}-bin.zip"; - sha256 = "1qxmb4mki2gjhfwmy7lwak283l86iq3nivw57a2gpw2g64xa9wh3"; + sha256 = "05drn7a9d2blbmd3l0443bpf5qzf5frwnl9ww0bha1qfng95zgcq"; }; }; diff --git a/pkgs/development/tools/build-managers/sbt/default.nix b/pkgs/development/tools/build-managers/sbt/default.nix index 4ea85eca2138..01a112bcecce 100644 --- a/pkgs/development/tools/build-managers/sbt/default.nix +++ b/pkgs/development/tools/build-managers/sbt/default.nix @@ -2,7 +2,7 @@ stdenv.mkDerivation rec { name = "sbt-${version}"; - version = "1.1.0"; + version = "1.1.1"; src = fetchurl { urls = [ @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { "https://github.com/sbt/sbt/releases/download/v${version}/sbt-${version}.tgz" "https://cocl.us/sbt-${version}.tgz" ]; - sha256 = "1mz2aiwb3ha8dnx9fzbykz1y5ax01l2x6xml956fs1vm555v534x"; + sha256 = "0fy04mnnrbdm7kfnjh6sv1q3g6wqzvwyf1p43f36rw3qalap544a"; }; patchPhase = '' diff --git a/pkgs/development/tools/build-managers/waf/default.nix b/pkgs/development/tools/build-managers/waf/default.nix index 61184cb6ba1a..65501b2b9350 100644 --- a/pkgs/development/tools/build-managers/waf/default.nix +++ b/pkgs/development/tools/build-managers/waf/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "waf-${version}"; - version = "1.9.0"; + version = "2.0.4"; src = fetchurl { url = "https://waf.io/waf-${version}.tar.bz2"; - sha256 = "1sjpqzm2fzm8pxi3fwfinpsbw4z9040qkrzbg3lxik7ppsbjhn58"; + sha256 = "0zmnwgccq5j7ipfi2j0k5s40q27krp1m6v2bd650axgzdbpa7ain"; }; buildInputs = [ python2 ]; diff --git a/pkgs/development/tools/buildah/default.nix b/pkgs/development/tools/buildah/default.nix index 5fdbd7766cf8..c778b67a95f5 100644 --- a/pkgs/development/tools/buildah/default.nix +++ b/pkgs/development/tools/buildah/default.nix @@ -3,13 +3,13 @@ , go-md2man }: let - version = "0.11"; + version = "0.12"; src = fetchFromGitHub { rev = "v${version}"; owner = "projectatomic"; repo = "buildah"; - sha256 = "0rq3dw6p9rcqc99jk93j0qwg1p8fh4pwqvzylcqlcyqhv46426zf"; + sha256 = "0xyq7rv0lj6bxwh2rnf44w9gjcqbdkfcdff88023b9vlsc8h4k0m"; }; goPackagePath = "github.com/projectatomic/buildah"; diff --git a/pkgs/development/tools/continuous-integration/jenkins/default.nix b/pkgs/development/tools/continuous-integration/jenkins/default.nix index 18ca5d4d8972..2d534435b5f9 100644 --- a/pkgs/development/tools/continuous-integration/jenkins/default.nix +++ b/pkgs/development/tools/continuous-integration/jenkins/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "jenkins-${version}"; - version = "2.89.3"; + version = "2.89.4"; src = fetchurl { url = "http://mirrors.jenkins.io/war-stable/${version}/jenkins.war"; - sha256 = "0flqd3r1nip9wc8sy0kiqjivgx0zkpzlkbz6n3gb1plc73lpdwbr"; + sha256 = "0lwv3y12r36amkr70fap5g1zfd7vv92809lh9w7178s91sikm28x"; }; buildCommand = '' diff --git a/pkgs/development/tools/coursier/default.nix b/pkgs/development/tools/coursier/default.nix index 79a077f4a751..e3c8d7ed014d 100644 --- a/pkgs/development/tools/coursier/default.nix +++ b/pkgs/development/tools/coursier/default.nix @@ -2,21 +2,17 @@ stdenv.mkDerivation rec { name = "coursier-${version}"; - version = "1.0.0"; + version = "1.0.1"; src = fetchurl { url = "https://github.com/coursier/coursier/raw/v${version}/coursier"; - sha256 = "0167cgp3kqx336p8dmlxx57bi3lhzyp6ncly28v1s7r2sjxj9krj"; + sha256 = "1rn1vb33zfl9iy80fhqvi9ykdjxz029nah5yfr5xixcx9al0bai3"; }; nativeBuildInputs = [ makeWrapper ]; - unpackPhase = ":"; - - installPhase = '' - mkdir -p $out/bin - cp ${src} $out/bin/coursier - chmod +x $out/bin/coursier + buildCommand = '' + install -Dm555 $src $out/bin/coursier wrapProgram $out/bin/coursier --prefix PATH ":" ${jre}/bin ''; diff --git a/pkgs/development/tools/database/liquibase/default.nix b/pkgs/development/tools/database/liquibase/default.nix index a7b9976be43c..394169c9cc9d 100644 --- a/pkgs/development/tools/database/liquibase/default.nix +++ b/pkgs/development/tools/database/liquibase/default.nix @@ -12,11 +12,11 @@ in stdenv.mkDerivation rec { name = "${pname}-${version}"; pname = "liquibase"; - version = "3.5.3"; + version = "3.5.5"; src = fetchurl { url = "https://github.com/liquibase/liquibase/releases/download/${pname}-parent-${version}/${name}-bin.tar.gz"; - sha256 = "04cpnfycv0ms70d70w8ijqp2yacj2svs7v3lk99z1bpq3rzx51gv"; + sha256 = "1ipjbzdb32xigm0vg6zzjnbx9n248rrkr324n5igp53nxbvgf3fs"; }; buildInputs = [ jre makeWrapper ]; diff --git a/pkgs/development/tools/database/squirrel-sql/default.nix b/pkgs/development/tools/database/squirrel-sql/default.nix index afac17e121ad..7d4cf6ea5d5e 100644 --- a/pkgs/development/tools/database/squirrel-sql/default.nix +++ b/pkgs/development/tools/database/squirrel-sql/default.nix @@ -5,13 +5,13 @@ , drivers ? [] }: let - version = "3.7.1"; + version = "3.8.1"; in stdenv.mkDerivation rec { name = "squirrel-sql-${version}"; src = fetchurl { url = "mirror://sourceforge/project/squirrel-sql/1-stable/${version}-plainzip/squirrelsql-${version}-standard.zip"; - sha256 = "1v141ply57k5krwbnnmz4mbs9hs8rbys0bkjz69gvxlqjizyiq23"; + sha256 = "1vv38i4rwm8c8h0p9mmz21dyafd71pqprj7b8i5vx7f4q8xns2d2"; }; buildInputs = [ diff --git a/pkgs/development/tools/delve/default.nix b/pkgs/development/tools/delve/default.nix index 3671a3dcca9b..9a7a600d1343 100644 --- a/pkgs/development/tools/delve/default.nix +++ b/pkgs/development/tools/delve/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { name = "delve-${version}"; - version = "0.12.2"; + version = "1.0.0"; goPackagePath = "github.com/derekparker/delve"; excludedPackages = "\\(_fixtures\\|scripts\\|service/test\\)"; @@ -11,7 +11,7 @@ buildGoPackage rec { owner = "derekparker"; repo = "delve"; rev = "v${version}"; - sha256 = "1241zqyimgqil4qd72f0yiw935lkdmfr88kvqbkn9n05k7xhdg30"; + sha256 = "08hsairhrifh41d288jhc65zbhs9k0hs738dbdzsbcvlmycrhvgx"; }; meta = with stdenv.lib; { diff --git a/pkgs/development/tools/devpi-client/default.nix b/pkgs/development/tools/devpi-client/default.nix index 6a98befd346e..905314efe5a9 100644 --- a/pkgs/development/tools/devpi-client/default.nix +++ b/pkgs/development/tools/devpi-client/default.nix @@ -29,8 +29,9 @@ pythonPackages.buildPythonApplication rec { # setuptools do not get propagated into the tox call (cannot import setuptools) rm testing/test_test.py - # test tries to connect to upstream pypi - py.test -k 'not test_pypi_index_attributes' testing + # test_pypi_index_attributes tries to connect to upstream pypi + # test_download_release_error is fixed in the next release + py.test -k 'not test_pypi_index_attributes and not test_download_release_error' testing ''; LC_ALL = "en_US.UTF-8"; diff --git a/pkgs/development/tools/devpi-server/default.nix b/pkgs/development/tools/devpi-server/default.nix index 275e411fc8d7..6823ae3372cb 100644 --- a/pkgs/development/tools/devpi-server/default.nix +++ b/pkgs/development/tools/devpi-server/default.nix @@ -3,17 +3,24 @@ pythonPackages.buildPythonApplication rec { name = "${pname}-${version}"; pname = "devpi-server"; - version = "4.3.1"; + version = "4.4.0"; src = pythonPackages.fetchPypi { inherit pname version; - sha256 = "0x6ks2sbpknznxaqlh0gf5hcvhkmgixixq2zs91wgfqxk4vi4s6n"; + sha256 = "0y77kcnk26pfid8vsw07v2k61x9sdl6wbmxg5qxnz3vd7703xpkl"; }; propagatedBuildInputs = with pythonPackages; [ devpi-common execnet itsdangerous pluggy waitress pyramid passlib ]; - checkInputs = with pythonPackages; [ nginx webtest pytest beautifulsoup4 pytest-timeout pytest-catchlog mock pyyaml ]; + checkInputs = with pythonPackages; [ nginx webtest pytest beautifulsoup4 pytest-timeout mock pyyaml ]; + preCheck = '' + # These tests pass with pytest 3.3.2 but not with pytest 3.4.0. + sed -i 's/test_basic/noop/' test_devpi_server/test_log.py + sed -i 's/test_new/noop/' test_devpi_server/test_log.py + sed -i 's/test_thread_run_try_again/noop/' test_devpi_server/test_replica.py + ''; checkPhase = '' + runHook preCheck cd test_devpi_server/ PATH=$PATH:$out/bin pytest --slow -rfsxX ''; diff --git a/pkgs/development/tools/documentation/gtk-doc/default.nix b/pkgs/development/tools/documentation/gtk-doc/default.nix index b88b8e3c82a9..a176c5cb7645 100644 --- a/pkgs/development/tools/documentation/gtk-doc/default.nix +++ b/pkgs/development/tools/documentation/gtk-doc/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, autoreconfHook, pkgconfig, perl, python, libxml2Python, libxslt, which -, docbook_xml_dtd_43, docbook_xsl, gnome_doc_utils, dblatex, gettext, itstool }: +, docbook_xml_dtd_43, docbook_xsl, gnome-doc-utils, dblatex, gettext, itstool }: stdenv.mkDerivation rec { name = "gtk-doc-${version}"; @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ autoreconfHook ]; buildInputs = [ pkgconfig perl python libxml2Python libxslt docbook_xml_dtd_43 docbook_xsl - gnome_doc_utils dblatex gettext which itstool + gnome-doc-utils dblatex gettext which itstool ]; configureFlags = "--disable-scrollkeeper"; diff --git a/pkgs/development/tools/electron/default.nix b/pkgs/development/tools/electron/default.nix index 0df2decef2cb..f2b9348103ab 100644 --- a/pkgs/development/tools/electron/default.nix +++ b/pkgs/development/tools/electron/default.nix @@ -1,7 +1,7 @@ { stdenv, lib, libXScrnSaver, makeWrapper, fetchurl, unzip, atomEnv }: let - version = "1.7.11"; + version = "1.8.2"; name = "electron-${version}"; throwSystem = throw "Unsupported system: ${stdenv.system}"; @@ -10,8 +10,8 @@ let description = "Cross platform desktop application shell"; homepage = https://github.com/electron/electron; license = licenses.mit; - maintainers = [ maintainers.travisbhartwell ]; - platforms = [ "x86_64-darwin" "x86_64-linux" "i686-linux" "armv7l-linux" ]; + maintainers = with maintainers; [ travisbhartwell manveru ]; + platforms = [ "x86_64-darwin" "x86_64-linux" "i686-linux" "armv7l-linux" "aarch64-linux" ]; }; linux = { @@ -20,15 +20,19 @@ let src = { i686-linux = fetchurl { url = "https://github.com/electron/electron/releases/download/v${version}/electron-v${version}-linux-ia32.zip"; - sha256 = "0mxrayczs6fc2a53fzfbgs88l71wm7hadq9ir510kicakblmdbyx"; + sha256 = "12q5h6gh9zzhndg6yfka821rblq3l80d2qzqrq4nbq6rlsshjp9d"; }; x86_64-linux = fetchurl { url = "https://github.com/electron/electron/releases/download/v${version}/electron-v${version}-linux-x64.zip"; - sha256 = "0v22xhzbq9lcbc83laqs45pbx8gzv648qfkj01pxfsmv3lb4myrl"; + sha256 = "07ggq9wgfz3z5z0lwzzgs6im0qs83pz0pcfwr0r42zgmwg7j78b8"; }; armv7l-linux = fetchurl { url = "https://github.com/electron/electron/releases/download/v${version}/electron-v${version}-linux-armv7l.zip"; - sha256 = "02n2y69zwzacigqp6f4vg47cmjzf8gvbbispmzkg3pnzk4qc9473"; + sha256 = "1b0p5x9zigyd6d8gz2hxc4scllrpnbx1dzzwlsvw6ilqbj1ypc7i"; + }; + aarch64-linux = fetchurl { + url = "https://github.com/electron/electron/releases/download/v${version}/electron-v${version}-linux-arm64.zip"; + sha256 = "0k4np2d4y15x1qfay8y9m8v9y223vdpbq5fdxa3ywbbyf8j361zd"; }; }.${stdenv.system} or throwSystem; @@ -56,7 +60,7 @@ let src = fetchurl { url = "https://github.com/electron/electron/releases/download/v${version}/electron-v${version}-darwin-x64.zip"; - sha256 = "19kfb09ap780ayk7miqfr6gmba9rd10f9q9aphj35yk7cl22znbr"; + sha256 = "0pq587vr1i87jdwcpbf6n136i9dp6i39dp5s95kihnm9qglxr42b"; }; buildInputs = [ unzip ]; diff --git a/pkgs/development/tools/galen/default.nix b/pkgs/development/tools/galen/default.nix index d553a5745524..bbcdc0cd798e 100644 --- a/pkgs/development/tools/galen/default.nix +++ b/pkgs/development/tools/galen/default.nix @@ -2,14 +2,14 @@ stdenv.mkDerivation rec { pname = "galen"; - version = "2.3.0"; + version = "2.3.6"; name = "${pname}-${version}"; inherit jre8; src = fetchurl { url = "https://github.com/galenframework/galen/releases/download/galen-${version}/galen-bin-${version}.zip"; - sha256 = "10z7vh3jiq7kbzzp3j0354swkr4xxz9qimi5c5bddbiy671k6cra"; + sha256 = "0kndib3slj7mdvhd36fxin5q87cnsz4hs135yxgjx0nccxq4f2h5"; }; buildInputs = [ unzip ]; diff --git a/pkgs/development/tools/golint/default.nix b/pkgs/development/tools/golint/default.nix index c54a924a1a65..99f049314ae8 100644 --- a/pkgs/development/tools/golint/default.nix +++ b/pkgs/development/tools/golint/default.nix @@ -2,8 +2,8 @@ buildGoPackage rec { name = "lint-${version}"; - version = "20160428-${stdenv.lib.strings.substring 0 7 rev}"; - rev = "c7bacac2b21ca01afa1dee0acf64df3ce047c28f"; + version = "20180208-${stdenv.lib.strings.substring 0 7 rev}"; + rev = "e14d9b0f1d332b1420c1ffa32562ad2dc84d645d"; goPackagePath = "github.com/golang/lint"; excludedPackages = "testdata"; @@ -11,7 +11,7 @@ buildGoPackage rec { src = fetchgit { inherit rev; url = "https://github.com/golang/lint"; - sha256 = "024dllcmpg8lx78cqgq551i6f9w6qlykfcx8l7yazak9kjwhpwjg"; + sha256 = "15ynf78v39n71aplrhbqvzfblhndp8cd6lnknm586sdl81wama6p"; }; goDeps = ./deps.nix; diff --git a/pkgs/development/tools/golint/deps.nix b/pkgs/development/tools/golint/deps.nix index f03bf9b5b23b..caf3615c666b 100644 --- a/pkgs/development/tools/golint/deps.nix +++ b/pkgs/development/tools/golint/deps.nix @@ -4,8 +4,8 @@ fetch = { type = "git"; url = "https://go.googlesource.com/tools"; - rev = "9ae4729fba20b3533d829a9c6ba8195b068f2abc"; - sha256 = "1j51aaskfqc953p5s9naqimr04hzfijm4yczdsiway1xnnvvpfr1"; + rev = "66487607e2081c7c2af2281c62c14ee000d5024b"; + sha256 = "03wiraqkms4jb5gi7vmp52mpmp4av08yw4gr2nk31c2rnhyd3jv4"; }; } ] diff --git a/pkgs/development/tools/leaps/default.nix b/pkgs/development/tools/leaps/default.nix index 8032b256905b..9e41ef381318 100644 --- a/pkgs/development/tools/leaps/default.nix +++ b/pkgs/development/tools/leaps/default.nix @@ -2,14 +2,14 @@ buildGoPackage rec { name = "leaps-${version}"; - version = "0.5.1"; + version = "0.9.0"; - goPackagePath = "github.com/jeffail/leaps"; + goPackagePath = "github.com/Jeffail/leaps"; src = fetchFromGitHub { - owner = "jeffail"; + owner = "Jeffail"; repo = "leaps"; - sha256 = "0w63y777h5qc8fwnkrbawn3an9px0l1zz3649x0n8lhk125fvchj"; + sha256 = "1bzas7ixyfsfh81lnvplhx59yghkmnmy5p7jv9rnwp219dwbylpz"; rev = "v${version}"; }; diff --git a/pkgs/development/tools/leaps/deps.nix b/pkgs/development/tools/leaps/deps.nix index d611d9b49540..afaf42779b3e 100644 --- a/pkgs/development/tools/leaps/deps.nix +++ b/pkgs/development/tools/leaps/deps.nix @@ -1,94 +1,185 @@ -[ - { - goPackagePath = "github.com/amir/raidman"; - fetch = { - type = "git"; - url = "https://github.com/amir/raidman"; - rev = "91c20f3f475cab75bb40ad7951d9bbdde357ade7"; - sha256 = "0pkqy5hzjkk04wj1ljq8jsyla358ilxi4lkmvkk73b3dh2wcqvpp"; - }; - } - { - goPackagePath = "github.com/elazarl/go-bindata-assetfs"; - fetch = { - type = "git"; - url = "https://github.com/elazarl/go-bindata-assetfs"; - rev = "57eb5e1fc594ad4b0b1dbea7b286d299e0cb43c2"; - sha256 = "1za29pa15y2xsa1lza97jlkax9qj93ks4a2j58xzmay6rczfkb9i"; - }; - } - { - goPackagePath = "github.com/garyburd/redigo"; - fetch = { - type = "git"; - url = "https://github.com/garyburd/redigo"; - rev = "8873b2f1995f59d4bcdd2b0dc9858e2cb9bf0c13"; - sha256 = "1lzhb99pcwwf5ddcs0bw00fwf9m1d0k7b92fqz2a01jlij4pm5l2"; - }; - } - { - goPackagePath = "github.com/go-sql-driver/mysql"; - fetch = { - type = "git"; - url = "https://github.com/go-sql-driver/mysql"; - rev = "7ebe0a500653eeb1859664bed5e48dec1e164e73"; - sha256 = "1gyan3lyn2j00di9haq7zm3zcwckn922iigx3fvml6s2bsp6ljas"; - }; - } - { - goPackagePath = "github.com/golang/protobuf"; - fetch = { - type = "git"; - url = "https://github.com/golang/protobuf"; - rev = "bf531ff1a004f24ee53329dfd5ce0b41bfdc17df"; - sha256 = "10lnvmq28jp2wk1xc32mdk4745lal2bmdvbjirckb9wlv07zzzf0"; - }; - } - { - goPackagePath = "github.com/jeffail/gabs"; - fetch = { - type = "git"; - url = "https://github.com/jeffail/gabs"; - rev = "ee1575a53249b51d636e62464ca43a13030afdb5"; - sha256 = "0svv57193n8m86r7v7n0y9lny0p6nzr7xvz98va87h00mg146351"; - }; - } - { - goPackagePath = "github.com/jeffail/util"; - fetch = { - type = "git"; - url = "https://github.com/jeffail/util"; - rev = "48ada8ff9fcae546b5986f066720daa9033ad523"; - sha256 = "0k8zz7gdv4hb691fdyb5mhlixppcq8x4ny84fanflypnv258a3i0"; - }; - } - { - goPackagePath = "github.com/lib/pq"; - fetch = { - type = "git"; - url = "https://github.com/lib/pq"; - rev = "3cd0097429be7d611bb644ef85b42bfb102ceea4"; - sha256 = "1q7qfzyfgjk6rvid548r43fi4jhvsh4dhfvfjbp2pz4xqsvpsm7a"; - }; - } - { - goPackagePath = "github.com/satori/go.uuid"; - fetch = { - type = "git"; - url = "https://github.com/satori/go.uuid"; - rev = "f9ab0dce87d815821e221626b772e3475a0d2749"; - sha256 = "0z18j6zxq9kw4lgcpmhh3k7jrb9gy1lx252xz5qhs4ywi9w77xwi"; - }; - } - - { - goPackagePath = "golang.org/x/net"; - fetch = { - type = "git"; - url = "https://go.googlesource.com/net"; - rev = "07b51741c1d6423d4a6abab1c49940ec09cb1aaf"; - sha256 = "12lvdj0k2gww4hw5f79qb9yswqpy4i3bgv1likmf3mllgdxfm20w"; - }; - } -] + # file automatically generated from Gopkg.lock with https://github.com/nixcloud/dep2nix (golang dep) + [ + + { + goPackagePath = "github.com/Azure/go-autorest"; + fetch = { + type = "git"; + url = "https://github.com/Azure/go-autorest"; + rev = "fc3b03a2d2d1f43fad3007038bd16f044f870722"; + sha256 = "1j6aqbizlpiqcywdsj4dy4i76g8fbqc7d61c22ppc9knw0968h4r"; + }; + } + + { + goPackagePath = "github.com/Jeffail/gabs"; + fetch = { + type = "git"; + url = "https://github.com/Jeffail/gabs"; + rev = "2a3aa15961d5fee6047b8151b67ac2f08ba2c48c"; + sha256 = "1fx6fyl5x037viwlj319f3gsq749an17q5l6n2zvf3ny5wq0iqxr"; + }; + } + + { + goPackagePath = "github.com/amir/raidman"; + fetch = { + type = "git"; + url = "https://github.com/amir/raidman"; + rev = "1ccc43bfb9c93cb401a4025e49c64ba71e5e668b"; + sha256 = "074ckbyslrwn23q4x01hn3j7c3xngagn36lbli2g51n9j3x14jxr"; + }; + } + + { + goPackagePath = "github.com/azure/azure-sdk-for-go"; + fetch = { + type = "git"; + url = "https://github.com/azure/azure-sdk-for-go"; + rev = "21b68149ccf7c16b3f028bb4c7fd0ab458fe308f"; + sha256 = "0zlhrh3n9mc5w7r0sdaqmpqfm2d290b50an0k1bvrr892m4cnxaq"; + }; + } + + { + goPackagePath = "github.com/cenkalti/backoff"; + fetch = { + type = "git"; + url = "https://github.com/cenkalti/backoff"; + rev = "61153c768f31ee5f130071d08fc82b85208528de"; + sha256 = "08x77mgb9zsj047n74rx6c16jjx985lmy4s6fl58mdgxgxjv54y5"; + }; + } + + { + goPackagePath = "github.com/dgrijalva/jwt-go"; + fetch = { + type = "git"; + url = "https://github.com/dgrijalva/jwt-go"; + rev = "dbeaa9332f19a944acb5736b4456cfcc02140e29"; + sha256 = "0zk6l6kzsjdijfn7c4h0aywdjx5j2hjwi67vy1k6wr46hc8ks2hs"; + }; + } + + { + goPackagePath = "github.com/elazarl/go-bindata-assetfs"; + fetch = { + type = "git"; + url = "https://github.com/elazarl/go-bindata-assetfs"; + rev = "30f82fa23fd844bd5bb1e5f216db87fd77b5eb43"; + sha256 = "1swfb37g6sga3awvcmxf49ngbpvjv7ih5an9f8ixjqcfcwnb7nzp"; + }; + } + + { + goPackagePath = "github.com/garyburd/redigo"; + fetch = { + type = "git"; + url = "https://github.com/garyburd/redigo"; + rev = "d1ed5c67e5794de818ea85e6b522fda02623a484"; + sha256 = "0gw18k9kg93hvdks93hckrdqppg1bav82sp2c98q6z36dkvaih24"; + }; + } + + { + goPackagePath = "github.com/go-sql-driver/mysql"; + fetch = { + type = "git"; + url = "https://github.com/go-sql-driver/mysql"; + rev = "a0583e0143b1624142adab07e0e97fe106d99561"; + sha256 = "1rw1m91dpm23s6nn6jc4zi6rq2mgl7zx07gyadrdn0sh7cj8c89d"; + }; + } + + { + goPackagePath = "github.com/golang/protobuf"; + fetch = { + type = "git"; + url = "https://github.com/golang/protobuf"; + rev = "925541529c1fa6821df4e44ce2723319eb2be768"; + sha256 = "1d3zjvhl115l23xakj0014qpjchivlg098h10v5nfirkk1i9f9sa"; + }; + } + + { + goPackagePath = "github.com/gorilla/websocket"; + fetch = { + type = "git"; + url = "https://github.com/gorilla/websocket"; + rev = "ea4d1f681babbce9545c9c5f3d5194a789c89f5b"; + sha256 = "1bhgs2542qs49p1dafybqxfs2qc072xv41w5nswyrknwyjxxs2a1"; + }; + } + + { + goPackagePath = "github.com/kardianos/osext"; + fetch = { + type = "git"; + url = "https://github.com/kardianos/osext"; + rev = "ae77be60afb1dcacde03767a8c37337fad28ac14"; + sha256 = "056dkgxrqjj5r18bnc3knlpgdz5p3yvp12y4y978hnsfhwaqvbjz"; + }; + } + + { + goPackagePath = "github.com/lib/pq"; + fetch = { + type = "git"; + url = "https://github.com/lib/pq"; + rev = "88edab0803230a3898347e77b474f8c1820a1f20"; + sha256 = "02y7c8xy33x5q4167x2drzrys41nfi7wxxp9hy4vpazfws88al9p"; + }; + } + + { + goPackagePath = "github.com/marstr/guid"; + fetch = { + type = "git"; + url = "https://github.com/marstr/guid"; + rev = "8bdf7d1a087ccc975cf37dd6507da50698fd19ca"; + sha256 = "1mxcigzfc1bbh5b616hm89bp06allhwcsas9v9lks235h0acgn4x"; + }; + } + + { + goPackagePath = "github.com/satori/go.uuid"; + fetch = { + type = "git"; + url = "https://github.com/satori/go.uuid"; + rev = "f58768cc1a7a7e77a3bd49e98cdd21419399b6a3"; + sha256 = "1j4s5pfg2ldm35y8ls8jah4dya2grfnx2drb4jcbjsyrp4cm5yfb"; + }; + } + + { + goPackagePath = "golang.org/x/net"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/net"; + rev = "cbe0f9307d0156177f9dd5dc85da1a31abc5f2fb"; + sha256 = "1hmpqkxh97ayyy0xcdvf1bwirwja4wyin3sh0fzjlh93aqmqgylf"; + }; + } + + { + goPackagePath = "gopkg.in/alexcesaro/statsd.v2"; + fetch = { + type = "git"; + url = "https://gopkg.in/alexcesaro/statsd.v2"; + rev = "7fea3f0d2fab1ad973e641e51dba45443a311a90"; + sha256 = "02jdx68vicwsgabrnwgg1rvc45rinyh8ikinqgbqc56c5hkx3brj"; + }; + } + + { + goPackagePath = "gopkg.in/yaml.v2"; + fetch = { + type = "git"; + url = "https://gopkg.in/yaml.v2"; + rev = "d670f9405373e636a5a2765eea47fac0c9bc91a4"; + sha256 = "1w1xid51n8v1mydn2m3vgggw8qgpd5a5sr62snsc77d99fpjsrs0"; + }; + } + +] \ No newline at end of file diff --git a/pkgs/development/tools/minizinc/default.nix b/pkgs/development/tools/minizinc/default.nix index 00c2663e3a46..d569b8d30687 100644 --- a/pkgs/development/tools/minizinc/default.nix +++ b/pkgs/development/tools/minizinc/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchFromGitHub, cmake, flex, bison }: let - version = "2.0.14"; + version = "2.1.7"; in stdenv.mkDerivation { name = "minizinc-${version}"; @@ -11,7 +11,7 @@ stdenv.mkDerivation { rev = "${version}"; owner = "MiniZinc"; repo = "libminizinc"; - sha256 = "02wy91nv79lrvvhhimcxp7sqz5wd457n1n68zl7qcsm5vfn1hm4q"; + sha256 = "05rifsgzfaalv5ymv59sjcvhr6i1byzbmq5p36hj3hpi5f929kip"; }; # meta is all the information about the package.. diff --git a/pkgs/development/tools/misc/babeltrace/default.nix b/pkgs/development/tools/misc/babeltrace/default.nix index 2adc61ce6456..d4a8d483e2e5 100644 --- a/pkgs/development/tools/misc/babeltrace/default.nix +++ b/pkgs/development/tools/misc/babeltrace/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, pkgconfig, glib, libuuid, popt, elfutils }: stdenv.mkDerivation rec { - name = "babeltrace-1.5.3"; + name = "babeltrace-1.5.4"; src = fetchurl { url = "http://www.efficios.com/files/babeltrace/${name}.tar.bz2"; - sha256 = "0z0k4qvz4ypxs4dmgrzv9da7ylf6jr94ra6nylqpfrdspvjzwj92"; + sha256 = "1h8zi7afilbfx4jvdlhhgysj6x01w3799mdk4mdcgax04fch6hwn"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/tools/misc/doclifter/default.nix b/pkgs/development/tools/misc/doclifter/default.nix index 28b108c743f0..928f12602909 100644 --- a/pkgs/development/tools/misc/doclifter/default.nix +++ b/pkgs/development/tools/misc/doclifter/default.nix @@ -1,10 +1,10 @@ {stdenv, fetchurl, python}: stdenv.mkDerivation { - name = "doclifter-2.15"; + name = "doclifter-2.17"; src = fetchurl { - url = http://www.catb.org/~esr/doclifter/doclifter-2.15.tar.gz; - sha256 = "14k750bxp0kpnm130pp22vx3vmppfnzwisc042din1416ka07yv0"; + url = http://www.catb.org/~esr/doclifter/doclifter-2.17.tar.gz; + sha256 = "1m8yfjbl8wzcml9q4k7m1crwid0a14r07fqf33bmmgx1zpjk8kmv"; }; buildInputs = [ python ]; diff --git a/pkgs/development/tools/misc/eggdbus/default.nix b/pkgs/development/tools/misc/eggdbus/default.nix index 27dadd08e560..9f0ea147b585 100644 --- a/pkgs/development/tools/misc/eggdbus/default.nix +++ b/pkgs/development/tools/misc/eggdbus/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, glib, dbus, dbus_glib }: +{ stdenv, fetchurl, pkgconfig, glib, dbus, dbus-glib }: stdenv.mkDerivation rec { name = "eggdbus-0.6"; @@ -9,7 +9,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ glib dbus dbus_glib ]; + buildInputs = [ glib dbus dbus-glib ]; meta = { homepage = https://hal.freedesktop.org/releases/; diff --git a/pkgs/development/tools/misc/gdbgui/default.nix b/pkgs/development/tools/misc/gdbgui/default.nix index 6d5bfef2f80e..de66bf5da14e 100644 --- a/pkgs/development/tools/misc/gdbgui/default.nix +++ b/pkgs/development/tools/misc/gdbgui/default.nix @@ -5,14 +5,14 @@ in python27Packages.buildPythonApplication rec { name = "${pname}-${version}"; pname = "gdbgui"; - version = "0.11.0.0"; + version = "0.11.1.2"; buildInputs = [ gdb ]; propagatedBuildInputs = builtins.attrValues deps.packages; src = python27Packages.fetchPypi { inherit pname version; - sha256 = "09bfrln16ai5azpjan1q24xz700sxsaa3ndynq8c8qdan82bfi1g"; + sha256 = "15502fg90df183mcg6nic8fakf111pgrlp7f044g3136wpwgfln7"; }; postPatch = '' diff --git a/pkgs/development/tools/misc/gtkdialog/default.nix b/pkgs/development/tools/misc/gtkdialog/default.nix index 50f451ebae23..02b4d1557678 100644 --- a/pkgs/development/tools/misc/gtkdialog/default.nix +++ b/pkgs/development/tools/misc/gtkdialog/default.nix @@ -1,4 +1,4 @@ -{stdenv, fetchurl, gtk2, pkgconfig, hicolor_icon_theme }: +{stdenv, fetchurl, gtk2, pkgconfig, hicolor-icon-theme }: stdenv.mkDerivation { name = "gtkdialog-0.8.3"; @@ -9,7 +9,7 @@ stdenv.mkDerivation { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ gtk2 hicolor_icon_theme ]; + buildInputs = [ gtk2 hicolor-icon-theme ]; meta = { homepage = https://code.google.com/archive/p/gtkdialog/; diff --git a/pkgs/development/tools/misc/intel-gpu-tools/default.nix b/pkgs/development/tools/misc/intel-gpu-tools/default.nix index 9c131b72a316..3d8b29e4ebc2 100644 --- a/pkgs/development/tools/misc/intel-gpu-tools/default.nix +++ b/pkgs/development/tools/misc/intel-gpu-tools/default.nix @@ -1,22 +1,28 @@ { stdenv, fetchurl, pkgconfig, libdrm, libpciaccess, cairo, dri2proto, udev , libX11, libXext, libXv, libXrandr, glib, bison, libunwind, python3, kmod -, procps, autoreconfHook, utilmacros }: +, procps, autoreconfHook, utilmacros, gnome2 }: stdenv.mkDerivation rec { - name = "intel-gpu-tools-1.19"; + name = "intel-gpu-tools-1.21"; src = fetchurl { - url = "http://xorg.freedesktop.org/archive/individual/app/${name}.tar.bz2"; - sha256 = "1wdhwf3im6ids95qw5r9hjj9hvp0qhzgi4llrlriy723q3kqm754"; + url = "http://xorg.freedesktop.org/archive/individual/app/${name}.tar.xz"; + sha256 = "0gvh317dg5c7kvjxxkh8g70hh3r3dc73mc4dzyvfa8nb4ix6xbyr"; }; - nativeBuildInputs = [ pkgconfig autoreconfHook utilmacros ]; + nativeBuildInputs = [ pkgconfig utilmacros ]; buildInputs = [ libdrm libpciaccess cairo dri2proto udev libX11 kmod - libXext libXv libXrandr glib bison libunwind python3 procps ]; + libXext libXv libXrandr glib bison libunwind python3 procps + gnome2.gtkdoc ]; + + preConfigure = '' + ./autogen.sh + ''; preBuild = '' patchShebangs debugger/system_routine/pre_cpp.py substituteInPlace tools/Makefile.am --replace '$(CAIRO_CFLAGS)' '$(CAIRO_CFLAGS) $(GLIB_CFLAGS)' + substituteInPlace tests/Makefile.am --replace '$(CAIRO_CFLAGS)' '$(CAIRO_CFLAGS) $(GLIB_CFLAGS)' ''; meta = with stdenv.lib; { diff --git a/pkgs/development/tools/misc/ltrace/default.nix b/pkgs/development/tools/misc/ltrace/default.nix index e1602b0d24e7..66fbed514dc5 100644 --- a/pkgs/development/tools/misc/ltrace/default.nix +++ b/pkgs/development/tools/misc/ltrace/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, elfutils }: +{ stdenv, fetchurl, elfutils, libunwind }: stdenv.mkDerivation rec { name = "ltrace-0.7.3"; @@ -8,7 +8,7 @@ stdenv.mkDerivation rec { sha256 = "00wmbdghqbz6x95m1mcdd3wd46l6hgcr4wggdp049dbifh3qqvqf"; }; - buildInputs = [ elfutils ]; + buildInputs = [ elfutils libunwind ]; preConfigure = '' @@ -16,9 +16,9 @@ stdenv.mkDerivation rec { makeFlagsArray=(INSTALL="install -c") ''; - meta = { + meta = with stdenv.lib; { description = "Library call tracer"; - homepage = http://www.ltrace.org/; + homepage = https://www.ltrace.org/; platforms = stdenv.lib.platforms.linux; }; } diff --git a/pkgs/development/tools/misc/lttng-tools/default.nix b/pkgs/development/tools/misc/lttng-tools/default.nix index 3591cdc0f529..eea54dbdf8be 100644 --- a/pkgs/development/tools/misc/lttng-tools/default.nix +++ b/pkgs/development/tools/misc/lttng-tools/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "lttng-tools-${version}"; - version = "2.10.1"; + version = "2.10.2"; src = fetchurl { url = "https://lttng.org/files/lttng-tools/${name}.tar.bz2"; - sha256 = "005axllajfbxh73vh1cacbapdvbxjsi3pkzq40giih4ps9x4pg10"; + sha256 = "17wsdhkw8c8gb0d1bcgw4dfx2ljrq4rzgpi8sb9y9hs6pbwqy0xk"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/tools/misc/lttng-ust/default.nix b/pkgs/development/tools/misc/lttng-ust/default.nix index bfdebec154ad..edfc7dc30ca6 100644 --- a/pkgs/development/tools/misc/lttng-ust/default.nix +++ b/pkgs/development/tools/misc/lttng-ust/default.nix @@ -13,11 +13,11 @@ stdenv.mkDerivation rec { name = "lttng-ust-${version}"; - version = "2.10.0"; + version = "2.10.1"; src = fetchurl { url = "https://lttng.org/files/lttng-ust/${name}.tar.bz2"; - sha256 = "1avx4p71g9m3zvynhhhysxnpkqyhhlv42xiv9502bvp3nwfkgnqs"; + sha256 = "17gfi1dn6bgg59qn4ihf8hag96lalx0g7dym2ccpzdz7f45krk07"; }; buildInputs = [ python ]; diff --git a/pkgs/development/tools/misc/openocd/default.nix b/pkgs/development/tools/misc/openocd/default.nix index 2ab0dbd1b5f5..73c5b7623184 100644 --- a/pkgs/development/tools/misc/openocd/default.nix +++ b/pkgs/development/tools/misc/openocd/default.nix @@ -25,6 +25,12 @@ stdenv.mkDerivation rec { "--enable-remote-bitbang" ]; + NIX_CFLAGS_COMPILE = [ + "-Wno-implicit-fallthrough" + "-Wno-format-truncation" + "-Wno-format-overflow" + ]; + postInstall = '' mkdir -p "$out/etc/udev/rules.d" rules="$out/share/openocd/contrib/60-openocd.rules" diff --git a/pkgs/development/tools/misc/pkgconfig/default.nix b/pkgs/development/tools/misc/pkgconfig/default.nix index 7cfd78a39a28..15d00b0a2a52 100644 --- a/pkgs/development/tools/misc/pkgconfig/default.nix +++ b/pkgs/development/tools/misc/pkgconfig/default.nix @@ -19,8 +19,7 @@ stdenv.mkDerivation rec { patches = optional (!vanilla) ./requires-private.patch ++ optional stdenv.isCygwin ./2.36.3-not-win32.patch; - preConfigure = optionalString (stdenv.system == "mips64el-linux") - ''cp -v ${automake}/share/automake*/config.{sub,guess} .''; + preConfigure = ""; # TODO(@Ericson2314): Remove next mass rebuild buildInputs = optional (stdenv.isCygwin || stdenv.isDarwin || stdenv.isSunOS) libiconv; configureFlags = [ "--with-internal-glib" ] diff --git a/pkgs/development/tools/misc/strace/default.nix b/pkgs/development/tools/misc/strace/default.nix index e5f298a1cabc..80d1a75e801d 100644 --- a/pkgs/development/tools/misc/strace/default.nix +++ b/pkgs/development/tools/misc/strace/default.nix @@ -5,8 +5,8 @@ stdenv.mkDerivation rec { version = "4.21"; src = fetchurl { - url = "mirror://sourceforge/strace/${name}.tar.xz"; - sha256 = "1dvrwi6v9j6b9j6852zzlc61hxgiciadi1xsl89wzbzqlkxnahbd"; + url = "https://strace.io/files/${version}/${name}.tar.xz"; + sha256 = "0dsw6xcfrmygidp1dj2ch8cl8icrar7789snkb2r8gh78kdqhxjw"; }; nativeBuildInputs = [ perl ]; @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { configureFlags = stdenv.lib.optional stdenv.hostPlatform.isAarch64 "--enable-mpers=check"; meta = with stdenv.lib; { - homepage = http://strace.sourceforge.net/; + homepage = http://strace.io/; description = "A system call tracer for Linux"; license = licenses.bsd3; platforms = platforms.linux; diff --git a/pkgs/development/tools/misc/sysbench/default.nix b/pkgs/development/tools/misc/sysbench/default.nix index 612df55471ba..d72fc86d7ee5 100644 --- a/pkgs/development/tools/misc/sysbench/default.nix +++ b/pkgs/development/tools/misc/sysbench/default.nix @@ -2,7 +2,7 @@ , libaio }: stdenv.mkDerivation rec { - name = "sysbench-1.0.6"; + name = "sysbench-1.0.13"; nativeBuildInputs = [ autoreconfHook pkgconfig ]; buildInputs = [ vim mysql.connector-c libaio ]; @@ -10,8 +10,8 @@ stdenv.mkDerivation rec { src = fetchFromGitHub { owner = "akopytov"; repo = "sysbench"; - rev = "1.0.6"; - sha256 = "0y3hlhzrggyyxwf378n006zlg2kwhmhh6vq6il0qn9agjmjmhl5l"; + rev = "1.0.13"; + sha256 = "1inxyjpcyv2ag3k5riwlaq91362y16yks75vs2crmhjxlxdspy8c"; }; meta = { diff --git a/pkgs/development/tools/misc/uncrustify/default.nix b/pkgs/development/tools/misc/uncrustify/default.nix index 6c27ad408603..3cf707c6bebb 100644 --- a/pkgs/development/tools/misc/uncrustify/default.nix +++ b/pkgs/development/tools/misc/uncrustify/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { name = "${product}-${version}"; product = "uncrustify"; - version = "0.66"; + version = "0.66.1"; src = fetchFromGitHub { owner = product; repo = product; rev = name; - sha256 = "156y71yf2xxskvikbn6yjfv8xgnsrrjij08irv21z0n7nx35jgmm"; + sha256 = "1y69b0g07ksynf1fwfh5qqwmscxfbvs1yi3n3lbdd4vplb9zakyx"; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/development/tools/misc/usb-modeswitch/default.nix b/pkgs/development/tools/misc/usb-modeswitch/default.nix index 8a1ce7c08868..d34a94e04670 100644 --- a/pkgs/development/tools/misc/usb-modeswitch/default.nix +++ b/pkgs/development/tools/misc/usb-modeswitch/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "usb-modeswitch-${version}"; - version = "2.5.0"; + version = "2.5.2"; src = fetchurl { url = "http://www.draisberghof.de/usb_modeswitch/${name}.tar.bz2"; - sha256 = "0cvnd16n2sp3w46fy507nl29q39jxxdk5qqbvk1rxaa91llbxh1i"; + sha256 = "19ifi80g9ns5dmspchjvfj4ykxssq9yrci8m227dgb3yr04srzxb"; }; makeFlags = [ diff --git a/pkgs/development/tools/ocaml/camlp5/default.nix b/pkgs/development/tools/ocaml/camlp5/default.nix index 0acd70b424a8..31cd7ccfd2c0 100644 --- a/pkgs/development/tools/ocaml/camlp5/default.nix +++ b/pkgs/development/tools/ocaml/camlp5/default.nix @@ -6,15 +6,22 @@ in stdenv.mkDerivation { - name = "camlp5${if transitional then "_transitional" else ""}-7.03"; + name = "camlp5${if transitional then "_transitional" else ""}-7.05"; src = fetchzip { - url = https://github.com/camlp5/camlp5/archive/rel703.tar.gz; - sha256 = "0bwzhp4qjypfa0x8drp8w434dfixm1nzrm6pcy9s5akpmqvb50a8"; + url = https://github.com/camlp5/camlp5/archive/rel705.tar.gz; + sha256 = "16igfyjl2jja4f1mibjfzk0c2jr09nxsz6lb63x1jkccmy6430q2"; }; buildInputs = [ ocaml ]; + postPatch = '' + for p in compile/compile.sh config/Makefile.tpl test/Makefile test/check_ocaml_versions.sh + do + substituteInPlace $p --replace '/bin/rm' rm + done + ''; + prefixKey = "-prefix "; preConfigure = "configureFlagsArray=(" + (if transitional then "--transitional" else "--strict") + diff --git a/pkgs/development/tools/ocaml/jbuilder/default.nix b/pkgs/development/tools/ocaml/jbuilder/default.nix index bef994f30b7c..2bfc832a0f0a 100644 --- a/pkgs/development/tools/ocaml/jbuilder/default.nix +++ b/pkgs/development/tools/ocaml/jbuilder/default.nix @@ -1,10 +1,13 @@ -{ stdenv, fetchzip, ocaml, opam }: +{ stdenv, fetchFromGitHub, ocaml, opam }: -stdenv.mkDerivation { - name = "jbuilder-1.0+beta14"; - src = fetchzip { - url = http://github.com/janestreet/jbuilder/archive/1.0+beta14.tar.gz; - sha256 = "0vq4chqp7bm3rd5n6ry1j1ia6xqlz463059ljd1jmawa4dcyilvl"; +stdenv.mkDerivation rec { + name = "jbuilder-${version}"; + version = "1.0+beta18"; + src = fetchFromGitHub { + owner = "ocaml"; + repo = "dune"; + rev = "${version}"; + sha256 = "1xw4i5qd2ndnddzb8b14fb52qxnjpr3lr9wx3mprv4f294kdg0l6"; }; buildInputs = [ ocaml ]; diff --git a/pkgs/development/tools/omniorb/default.nix b/pkgs/development/tools/omniorb/default.nix index 821401d578c7..cdd599c451f8 100644 --- a/pkgs/development/tools/omniorb/default.nix +++ b/pkgs/development/tools/omniorb/default.nix @@ -3,11 +3,11 @@ stdenv.mkDerivation rec { name = "omniorb-${version}"; - version = "4.2.0"; + version = "4.2.2"; src = fetchurl rec { url = "mirror://sourceforge/project/omniorb/omniORB/omniORB-${version}/omniORB-${version}.tar.bz2"; - sha256 = "1g58xcw4641wyisp9wscrkzaqrz0vf123dgy52qq2a3wk7y77hkl"; + sha256 = "1klf6ivhsisdnqxcbf161jxva0xzmfgmwypnxfzf4jq16770knfx"; }; buildInputs = [ python2 ]; diff --git a/pkgs/development/tools/packer/default.nix b/pkgs/development/tools/packer/default.nix index d97d67c9851a..b7757b474716 100644 --- a/pkgs/development/tools/packer/default.nix +++ b/pkgs/development/tools/packer/default.nix @@ -1,7 +1,7 @@ { stdenv, buildGoPackage, fetchFromGitHub }: buildGoPackage rec { name = "packer-${version}"; - version = "1.1.3"; + version = "1.2.0"; goPackagePath = "github.com/hashicorp/packer"; @@ -11,7 +11,7 @@ buildGoPackage rec { owner = "hashicorp"; repo = "packer"; rev = "v${version}"; - sha256 = "0bfjv4sqci10jzy11qg6q1xyik36v98vd6ck91sarawvgbaprsp2"; + sha256 = "05qsyh6d4qsvabr543ggd4b09fipxzr270cawsx0glmkgw82nkzi"; }; meta = with stdenv.lib; { diff --git a/pkgs/development/tools/pew/default.nix b/pkgs/development/tools/pew/default.nix index 16fc48174175..6eb3e88a0d13 100644 --- a/pkgs/development/tools/pew/default.nix +++ b/pkgs/development/tools/pew/default.nix @@ -2,11 +2,11 @@ with python3Packages; buildPythonApplication rec { name = "${pname}-${version}"; pname = "pew"; - version = "1.1.0"; + version = "1.1.2"; src = fetchPypi { inherit pname version; - sha256 = "0b8z1vjsll1kgnh3mmdjps5rr9gayy091rapp2dra71jrwkx3yfh"; + sha256 = "04anak82p4v9w0lgfs55s7diywxil6amq8c8bhli143ca8l2fcdq"; }; propagatedBuildInputs = [ virtualenv virtualenv-clone setuptools ]; diff --git a/pkgs/development/tools/pipenv/default.nix b/pkgs/development/tools/pipenv/default.nix index b017b1dc24b5..de2e6eb96a81 100644 --- a/pkgs/development/tools/pipenv/default.nix +++ b/pkgs/development/tools/pipenv/default.nix @@ -2,11 +2,11 @@ with python3Packages; buildPythonApplication rec { name = "${pname}-${version}"; pname = "pipenv"; - version = "9.0.1"; + version = "10.1.0"; src = fetchPypi { inherit pname version; - sha256 = "16k77iy1apbc1s5j78aimhjrcw89vbkq5irs80dmm70wayi0myz1"; + sha256 = "3732350e3cd8cc033d66748c418bab4b018dc0a4fcf1687f17a103ac44eac0c6"; }; LC_ALL = "en_US.UTF-8"; diff --git a/pkgs/development/tools/sassc/default.nix b/pkgs/development/tools/sassc/default.nix index eb82cf849660..326fa84f472a 100644 --- a/pkgs/development/tools/sassc/default.nix +++ b/pkgs/development/tools/sassc/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "sassc-${version}"; - version = "3.4.5"; + version = "3.4.8"; src = fetchurl { url = "https://github.com/sass/sassc/archive/${version}.tar.gz"; - sha256 = "1xk4kmmvziz9sal3swpqa10q0s289xjpcz8aggmly8mvxvmngsi9"; + sha256 = "02lnibrl6zgczkhvz01bdp0d2b0rbl69dfv5mdnbr4l8km7sa7b1"; }; patchPhase = '' diff --git a/pkgs/development/tools/sslmate/default.nix b/pkgs/development/tools/sslmate/default.nix index deb5c8106282..279bce20d142 100644 --- a/pkgs/development/tools/sslmate/default.nix +++ b/pkgs/development/tools/sslmate/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, perlPackages, perl, makeWrapper, openssl }: stdenv.mkDerivation rec { - name = "sslmate-1.5.0"; + name = "sslmate-1.6.0"; src = fetchurl { url = "https://packages.sslmate.com/other/${name}.tar.gz"; - sha256 = "1vxdkydwww4awi6ishvq68jvlj6vkbfw7pin1cdqpl84vs9q7ycg"; + sha256 = "1ypabdk0nlqjzpmn3m1szjyw7yq20svgbm92sqd5wqmsapyn3a6s"; }; makeFlags = "PREFIX=$(out)"; diff --git a/pkgs/development/tools/vagrant/default.nix b/pkgs/development/tools/vagrant/default.nix index 5d967ba81271..7f62102621ea 100644 --- a/pkgs/development/tools/vagrant/default.nix +++ b/pkgs/development/tools/vagrant/default.nix @@ -1,9 +1,9 @@ { lib, fetchurl, buildRubyGem, bundlerEnv, ruby, libarchive }: let - version = "2.0.1"; + version = "2.0.2"; url = "https://github.com/hashicorp/vagrant/archive/v${version}.tar.gz"; - sha256 = "1fjfl00n4rsq6khypm56g0vq6l153q128r35zky2ba30bz292ar1"; + sha256 = "1sjfwgy2y6q5s1drd8h8xgz2a0sv1l3kx9jilgc02hlcdz070iir"; deps = bundlerEnv rec { name = "${pname}-${version}"; diff --git a/pkgs/development/tools/vim-vint/default.nix b/pkgs/development/tools/vim-vint/default.nix index f8134a88643c..96307c8d134c 100644 --- a/pkgs/development/tools/vim-vint/default.nix +++ b/pkgs/development/tools/vim-vint/default.nix @@ -4,13 +4,13 @@ with python3Packages; buildPythonApplication rec { name = "vim-vint-${version}"; - version = "0.3.11"; + version = "0.3.18"; src = fetchFromGitHub { owner = "kuniwak"; repo = "vint"; rev = "v${version}"; - sha256 = "0xl166xs7sm404f1qz2s0xcry7fr1hgyvhqhyj1qj0dql9i3xx8v"; + sha256 = "0qrlimg385sxq4y6vqbanby31inaa1q47w9qcw5knwffbz96whrs"; }; # For python 3.5 > version > 2.7 , a nested dependency (pythonPackages.hypothesis) fails. diff --git a/pkgs/development/tools/wiggle/default.nix b/pkgs/development/tools/wiggle/default.nix index ffa6d4aac0ca..df32d68767fb 100644 --- a/pkgs/development/tools/wiggle/default.nix +++ b/pkgs/development/tools/wiggle/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation { - name = "wiggle-1.0"; + name = "wiggle-1.1"; src = fetchurl { - url = "https://github.com/neilbrown/wiggle/archive/v1.0.tar.gz"; - sha256 = "0552dkdvl001b2jasj0jwb69s7zy6wbc8gcysqj69b4qgl9c54cs"; + url = "https://github.com/neilbrown/wiggle/archive/v1.1.tar.gz"; + sha256 = "0gg1c0zcrd5fgawvjccmdscm3fka8h1qz4v807kvy1b2y1cf9c4w"; }; buildInputs = [ ncurses groff ]; diff --git a/pkgs/development/tools/yarn/default.nix b/pkgs/development/tools/yarn/default.nix index 72b0fe2adaf7..bd7dd5924c06 100644 --- a/pkgs/development/tools/yarn/default.nix +++ b/pkgs/development/tools/yarn/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "yarn-${version}"; - version = "1.3.2"; + version = "1.5.1"; src = fetchzip { url = "https://github.com/yarnpkg/yarn/releases/download/v${version}/yarn-v${version}.tar.gz"; - sha256 = "0lyh24ais8xqfmzbb4sszd2002xl6qbsg9sdjnpwh6aysrwp56r8"; + sha256 = "13m1y1c2h1fvq8fw1vlmnmnh3jx3l2cx7mz3x55sbgwcinzhkz9m"; }; buildInputs = [makeWrapper nodejs]; diff --git a/pkgs/development/web/nodejs/nodejs.nix b/pkgs/development/web/nodejs/nodejs.nix index eafaf956ee02..22eb772da1f9 100644 --- a/pkgs/development/web/nodejs/nodejs.nix +++ b/pkgs/development/web/nodejs/nodejs.nix @@ -26,6 +26,11 @@ let */ ]) (builtins.attrNames sharedLibDeps); + copyLibHeaders = + map + (name: "${getDev sharedLibDeps.${name}}/include/*") + (builtins.attrNames sharedLibDeps); + extraConfigFlags = optionals (!enableNpm) [ "--without-npm" ]; in @@ -74,13 +79,16 @@ in mkdir -p $out/share/bash-completion/completions/ $out/bin/npm completion > $out/share/bash-completion/completions/npm ''} + + # install the missing headers for node-gyp + cp -r ${concatStringsSep " " copyLibHeaders} $out/include/node ''; meta = { description = "Event-driven I/O framework for the V8 JavaScript engine"; homepage = https://nodejs.org; license = licenses.mit; - maintainers = with maintainers; [ goibhniu havvy gilligan cko ]; + maintainers = with maintainers; [ goibhniu gilligan cko ]; platforms = platforms.linux ++ platforms.darwin; }; diff --git a/pkgs/development/web/nodejs/v4.nix b/pkgs/development/web/nodejs/v4.nix deleted file mode 100644 index 64674066b295..000000000000 --- a/pkgs/development/web/nodejs/v4.nix +++ /dev/null @@ -1,11 +0,0 @@ -{ stdenv, callPackage, lib, enableNpm ? true }: - -let - buildNodejs = callPackage ./nodejs.nix {}; -in - buildNodejs { - inherit enableNpm; - version = "4.8.7"; - sha256 = "1y21wq092d3gmccm2zldbflbbbx7a71wi9l0bpkxvzmgws69liq3"; - patches = lib.optionals stdenv.isDarwin [ ./no-xcode.patch ]; - } diff --git a/pkgs/development/web/nodejs/v9.nix b/pkgs/development/web/nodejs/v9.nix index 79f364be2000..af3a8b4d22fd 100644 --- a/pkgs/development/web/nodejs/v9.nix +++ b/pkgs/development/web/nodejs/v9.nix @@ -5,7 +5,7 @@ let in buildNodejs { inherit enableNpm; - version = "9.5.0"; - sha256 = "0v8lspfca820mf45dj9hb56q00syhrqw5wmqmy1vnrcb6wx4csv6"; + version = "9.6.1"; + sha256 = "04hi7lwdizwqqbyi77f4z12gnsh673h92brmbssrmw5kjx6h4k5q"; patches = lib.optionals stdenv.isDarwin [ ./no-xcode-v7.patch ]; } diff --git a/pkgs/development/web/remarkjs/nodepkgs.nix b/pkgs/development/web/remarkjs/nodepkgs.nix index 751638e02da8..dde8ada0db93 100644 --- a/pkgs/development/web/remarkjs/nodepkgs.nix +++ b/pkgs/development/web/remarkjs/nodepkgs.nix @@ -2,7 +2,7 @@ {pkgs ? import { inherit system; - }, system ? builtins.currentSystem, nodejs ? pkgs."nodejs-4_x"}: + }, system ? builtins.currentSystem, nodejs ? pkgs."nodejs-6_x"}: let nodeEnv = import ../../node-packages/node-env.nix { @@ -13,4 +13,4 @@ in import ./node-packages.nix { inherit (pkgs) fetchurl fetchgit; inherit nodeEnv; -} \ No newline at end of file +} diff --git a/pkgs/games/angband/default.nix b/pkgs/games/angband/default.nix index 34b31cdf7ec8..317550059b45 100644 --- a/pkgs/games/angband/default.nix +++ b/pkgs/games/angband/default.nix @@ -1,14 +1,14 @@ { stdenv, fetchFromGitHub, autoreconfHook, ncurses5 }: stdenv.mkDerivation rec { - version = "4.0.5"; + version = "4.1.2"; name = "angband-${version}"; src = fetchFromGitHub { owner = "angband"; repo = "angband"; rev = version; - sha256 = "1l7ybqmsxpsijm7iqiqjpa7lhjafxml743q4crxn8wnwrbjzbi86"; + sha256 = "1n18i8ni154ym3d32zlbxcw0zz62h66iifr0h1yvvv2kp13p5zix"; }; nativeBuildInputs = [ autoreconfHook ]; diff --git a/pkgs/games/crawl/default.nix b/pkgs/games/crawl/default.nix index 430da66c21c5..39d98f4f8b56 100644 --- a/pkgs/games/crawl/default.nix +++ b/pkgs/games/crawl/default.nix @@ -5,13 +5,13 @@ stdenv.mkDerivation rec { name = "crawl-${version}${lib.optionalString tileMode "-tiles"}"; - version = "0.20.1"; + version = "0.21.1"; src = fetchFromGitHub { owner = "crawl-ref"; repo = "crawl-ref"; rev = version; - sha256 = "1ic3prvydmw753lasrvzgndcw0k4329pnafpphfpxwvdfsmhbi26"; + sha256 = "191pmd7vpp9qni5l13fb5s8g1axniah8a6hhi31gp0848c8n7hlh"; }; patches = [ ./crawl_purify.patch ]; @@ -34,7 +34,7 @@ stdenv.mkDerivation rec { fontsPath = lib.optionalString tileMode dejavu_fonts; - makeFlags = [ "prefix=$(out)" "FORCE_CC=gcc" "FORCE_CXX=g++" "HOSTCXX=g++" + makeFlags = [ "prefix=$(out)" "FORCE_CC=cc" "FORCE_CXX=c++" "HOSTCXX=c++" "SAVEDIR=~/.crawl" "sqlite=${sqlite.dev}" ] ++ lib.optional tileMode "TILES=y"; diff --git a/pkgs/games/dwarf-fortress/dfhack/default.nix b/pkgs/games/dwarf-fortress/dfhack/default.nix index 71938874057a..ca64045b185b 100644 --- a/pkgs/games/dwarf-fortress/dfhack/default.nix +++ b/pkgs/games/dwarf-fortress/dfhack/default.nix @@ -5,12 +5,12 @@ let dfVersion = "0.44.05"; - version = "${dfVersion}-alpha1"; + version = "${dfVersion}-r2"; rev = "refs/tags/${version}"; sha256 = "1hr3qsx7rd36syw7dfp4lh8kpmz1pvva757za2yn34hj1jm4nh52"; # revision of library/xml submodule - xmlRev = "3a9f401d196ee8ebc53edb9e15a13bfcb0879b4e"; + xmlRev = "2794f8a6d7405d4858bac486a0bb17b94740c142"; arch = if stdenv.system == "x86_64-linux" then "64" diff --git a/pkgs/games/dwarf-fortress/dwarf-therapist/default.nix b/pkgs/games/dwarf-fortress/dwarf-therapist/default.nix index 20f7502f27dd..8cdfc426d830 100644 --- a/pkgs/games/dwarf-fortress/dwarf-therapist/default.nix +++ b/pkgs/games/dwarf-fortress/dwarf-therapist/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "dwarf-therapist-original-${version}"; - version = "39.2.0"; + version = "39.2.1"; src = fetchFromGitHub { owner = "Dwarf-Therapist"; repo = "Dwarf-Therapist"; rev = "v${version}"; - sha256 = "1ddy9b9ly1231pnjs43gj7pvc77wjvs4j2rlympal81vyabaphmy"; + sha256 = "1dgcn1a4sz649kj94ldqy4ms7zhwpaj3q4r86b0yfh6dda8jzlgp"; }; outputs = [ "out" "layouts" ]; diff --git a/pkgs/games/instead/default.nix b/pkgs/games/instead/default.nix index ffa414cac3a1..343b2948d5ea 100644 --- a/pkgs/games/instead/default.nix +++ b/pkgs/games/instead/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, SDL, SDL_ttf, SDL_image, SDL_mixer, pkgconfig, lua, zlib, unzip }: let - version = "3.0.1"; + version = "3.2.0"; # I took several games at random from http://instead.syscall.ru/games/ games = [ @@ -33,7 +33,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "mirror://sourceforge/project/instead/instead/${version}/instead_${version}.tar.gz"; - sha256 = "0ynqzmr35zd1vbbv8n3vk93zj0njhs45w9z33wwkphg2zlniwnzb"; + sha256 = "0l57qdngxv9nbfj4ixr4fyanlazmdib2kr1nzv3g578308xzjv6a"; }; NIX_LDFLAGS = "-llua -lgcc_s"; diff --git a/pkgs/games/lgogdownloader/default.nix b/pkgs/games/lgogdownloader/default.nix index c857ccc47a85..ba273cfb6b97 100644 --- a/pkgs/games/lgogdownloader/default.nix +++ b/pkgs/games/lgogdownloader/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { name = "lgogdownloader-${version}"; - version = "3.2"; + version = "3.3"; src = fetchFromGitHub { owner = "Sude-"; repo = "lgogdownloader"; rev = "v${version}"; - sha256 = "0p1zh2l8g4y2z02xj0fndbfhcxgcpwhf5d9izwsdi3yljvqv23np"; + sha256 = "056idwwxjcp2zjqk5h7l3py1h45sax4vbsm93bz9shnfx1s1h3gc"; }; nativeBuildInputs = [ cmake pkgconfig help2man ]; diff --git a/pkgs/games/openclonk/default.nix b/pkgs/games/openclonk/default.nix index 0b0561afd24d..d3fb8c7bc58e 100644 --- a/pkgs/games/openclonk/default.nix +++ b/pkgs/games/openclonk/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, cmake, gnome3, pcre, freetype, glew, gtk3, libjpeg, libpng, SDL, SDL_mixer, libupnp, xorg, pkgconfig, gtest, tinyxml, gmock, readline, - libxkbcommon, epoxy, at_spi2_core, dbus, libxml2, + libxkbcommon, epoxy, at-spi2-core, dbus, libxml2, enableSoundtrack ? false # Enable the "Open Clonk Soundtrack - Explorers Journey" by David Oerther }: @@ -29,7 +29,7 @@ in stdenv.mkDerivation rec { buildInputs = [ cmake gnome3.gtksourceview pcre freetype glew gtk3 libjpeg libpng SDL SDL_mixer libupnp tinyxml xorg.libpthreadstubs libxkbcommon xorg.libXdmcp - pkgconfig gtest gmock readline epoxy at_spi2_core dbus libxml2 + pkgconfig gtest gmock readline epoxy at-spi2-core dbus libxml2 ]; meta = with stdenv.lib; { diff --git a/pkgs/games/openmw/default.nix b/pkgs/games/openmw/default.nix index 53c2cc5d073a..f64bbe4c1255 100644 --- a/pkgs/games/openmw/default.nix +++ b/pkgs/games/openmw/default.nix @@ -6,12 +6,12 @@ let src = fetchFromGitHub { owner = "OpenMW"; repo = "osg"; - rev = "35f1a459a4ab6da9d70427e6539bdf4faae4cc91"; - sha256 = "1s3a9dpbcc6v8d05pqin4xfv36i2031xpdja1vl8x11cw05fln91"; + rev = "2b4c8e37268e595b82da4b9aadd5507852569b87"; + sha256 = "0admnllxic6dcpic0h100927yw766ab55dix002vvdx36i6994jb"; }; }); in stdenv.mkDerivation rec { - version = "0.42.0"; + version = "0.43.0"; name = "openmw-${version}"; src = fetchFromGitHub { diff --git a/pkgs/games/quake3/ioquake/default.nix b/pkgs/games/quake3/ioquake/default.nix index d94a1f9a8d4d..bae26dfbad8c 100644 --- a/pkgs/games/quake3/ioquake/default.nix +++ b/pkgs/games/quake3/ioquake/default.nix @@ -1,20 +1,23 @@ -{ lib, stdenv, fetchFromGitHub, which, pkgconfig, xlibsWrapper, SDL2, mesa, openalSoft -, curl, speex, opusfile, libogg, libopus, libjpeg, mumble, freetype +{ stdenv, fetchFromGitHub, which, pkgconfig, SDL2, mesa, openalSoft +, curl, speex, opusfile, libogg, libvorbis, libopus, libjpeg, mumble, freetype }: stdenv.mkDerivation rec { name = "ioquake3-git-${version}"; - version = "2017-07-25"; + version = "2018-02-23"; src = fetchFromGitHub { owner = "ioquake"; repo = "ioq3"; - rev = "356ae10ef65d4401958d50f03288dcb22d957c96"; - sha256 = "0dz4zqlb9n3skaicj0vfvq4nr3ig80s8nwj9m87b39wc9wq34c5j"; + rev = "0d6edd227a13f1447938da1d1b020303c2545eb2"; + sha256 = "1nsagyzrai8cxhabcv2my8bbwmwckvri288j6x4qi5bmp78xl4hx"; }; nativeBuildInputs = [ which pkgconfig ]; - buildInputs = [ xlibsWrapper SDL2 mesa openalSoft curl speex opusfile libogg libopus libjpeg freetype mumble ]; + buildInputs = [ + SDL2 mesa openalSoft curl speex opusfile libogg libvorbis libopus libjpeg + freetype mumble + ]; enableParallelBuilding = true; @@ -28,11 +31,11 @@ stdenv.mkDerivation rec { mkdir -p $out/baseq3 ''; - meta = { + meta = with stdenv.lib; { homepage = https://ioquake3.org/; description = "First person shooter engine based on the Quake 3: Arena and Quake 3: Team Arena"; - license = lib.licenses.gpl2; - platforms = lib.platforms.linux; - maintainers = [ lib.maintainers.eelco lib.maintainers.abbradar ]; + license = licenses.gpl2; + platforms = platforms.linux; + maintainers = with maintainers; [ eelco abbradar ]; }; } diff --git a/pkgs/games/rogue/default.nix b/pkgs/games/rogue/default.nix index 05fd9ab523b6..40f0b1754941 100644 --- a/pkgs/games/rogue/default.nix +++ b/pkgs/games/rogue/default.nix @@ -14,6 +14,9 @@ stdenv.mkDerivation { buildInputs = [ ncurses ]; + # Fix build for recent ncurses versions + NIX_CFLAGS_COMPILE = [ "-DNCURSES_INTERNALS=1" ]; + meta = { homepage = http://rogue.rogueforge.net/rogue-5-4/; description = "The final version of the original Rogue game developed for the UNIX operating system"; diff --git a/pkgs/games/sil/default.nix b/pkgs/games/sil/default.nix new file mode 100644 index 000000000000..de91f26d95de --- /dev/null +++ b/pkgs/games/sil/default.nix @@ -0,0 +1,63 @@ +{ stdenv, fetchzip, ncurses, libX11, libXaw, libXt, libXext, libXmu, makeWrapper, writeScript, ... }: +let + setup = writeScript "setup" '' + mkdir -p "$ANGBAND_PATH" + # Copy all the data files into place + cp -ar $1/* "$ANGBAND_PATH" + # The copied files are not writable, make them so + chmod +w -R "$ANGBAND_PATH" + ''; +in +stdenv.mkDerivation rec { + name = "Sil-${version}"; + version = "1.3.0"; + + src = fetchzip { + url = "http://www.amirrorclear.net/flowers/game/sil/Sil-130-src.zip"; + sha256 = "1amp2mr3fxascra0k76sdsvikjh8g76nqh46kka9379zd35lfq8w"; + stripRoot=false; + }; + + buildInputs = [ makeWrapper ncurses libX11 libXaw libXt libXext libXmu ]; + + sourceRoot = "source/Sil/src"; + + makefile = "Makefile.std"; + + prePatch = '' + # Allow usage of ANGBAND_PATH + substituteInPlace config.h --replace "#define FIXED_PATHS" "" + ''; + + preConfigure = '' + buildFlagsArray+=("LIBS=-lXaw -lXext -lSM -lICE -lXmu -lXt -lX11 -lncurses") + ''; + + installPhase = '' + # the makefile doesn't have a sensible install target, so we hav to do it ourselves + mkdir -p $out/bin + cp sil $out/bin/sil + # Wrap the program to set a user-local ANGBAND_PATH, and run the setup script to copy files into place + # We could just use the options for a user-local save and scores dir, but it tried to write to the + # lib directory anyway, so we might as well give everyone a copy + wrapProgram $out/bin/sil \ + --run "set -u" \ + --run "export ANGBAND_PATH=\$HOME/.sil" \ + --run "${setup} ${src}/Sil/lib" + ''; + + meta = { + description = "A rouge-like game set in the first age of Middle-earth"; + longDescription = '' + A game of adventure set in the first age of Middle-earth, when the world still + rang with elven song and gleamed with dwarven mail. + + Walk the dark halls of Angband. Slay creatures black and fell. Wrest a shining + Silmaril from Morgoth’s iron crown. + ''; + homepage = http://www.amirrorclear.net/flowers/game/sil/index.html; + license = stdenv.lib.licenses.gpl2; + maintainers = [ stdenv.lib.maintainers.michaelpj ]; + platforms = stdenv.lib.platforms.linux; + }; +} diff --git a/pkgs/games/steam/runtime-wrapped.nix b/pkgs/games/steam/runtime-wrapped.nix index c5e5e525f365..c5633bedf39f 100644 --- a/pkgs/games/steam/runtime-wrapped.nix +++ b/pkgs/games/steam/runtime-wrapped.nix @@ -38,7 +38,7 @@ let libcap SDL2 libusb1 - dbus_glib + dbus-glib libav atk # Only libraries are needed from those two diff --git a/pkgs/games/the-powder-toy/default.nix b/pkgs/games/the-powder-toy/default.nix index ffbcd595cc35..c70feca0860f 100644 --- a/pkgs/games/the-powder-toy/default.nix +++ b/pkgs/games/the-powder-toy/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "the-powder-toy-${version}"; - version = "92.0.331"; + version = "92.5"; src = fetchFromGitHub { owner = "simtr"; repo = "The-Powder-Toy"; rev = "v${version}"; - sha256 = "185zlg20qk6ic9llyf4xka923snqrpdazg568raz0jiafzzsirax"; + sha256 = "1n15kgl4qnz55b32ddgmhrv64cl3awbds8arycn7mkf7akwdg1g6"; }; patches = [ ./fix-env.patch ]; diff --git a/pkgs/games/tintin/default.nix b/pkgs/games/tintin/default.nix index 4514735bb709..286e408e2555 100644 --- a/pkgs/games/tintin/default.nix +++ b/pkgs/games/tintin/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, zlib, pcre }: stdenv.mkDerivation rec { - name = "tintin-2.01.1"; + name = "tintin-2.01.4"; src = fetchurl { url = "mirror://sourceforge/tintin/${name}.tar.gz"; - sha256 = "195wrfcys8yy953gdrl1gxryhjnx9lg1vqgxm3dyzm8bi18aa2yc"; + sha256 = "1g7bh8xs1ml0iyraps3a3dzaycci922y7fk5j0wyr4ssyjzsy8nx"; }; buildInputs = [ zlib pcre ]; diff --git a/pkgs/games/tome4/default.nix b/pkgs/games/tome4/default.nix index f07fd88fbaf3..1e529fb15817 100644 --- a/pkgs/games/tome4/default.nix +++ b/pkgs/games/tome4/default.nix @@ -1,43 +1,86 @@ -{stdenv, fetchurl, openal, libpng, libvorbis, mesa_glu, premake4, SDL2, SDL2_image, SDL2_ttf }: +{ stdenv, fetchurl, makeDesktopItem, makeWrapper, premake4, unzip +, openal, libpng, libvorbis, mesa_glu, SDL2, SDL2_image, SDL2_ttf }: + +let + pname = "tome4"; + + desktop = makeDesktopItem { + desktopName = pname; + name = pname; + exec = "@out@/bin/${pname}"; + icon = "${pname}"; + terminal = "False"; + comment = "An open-source, single-player, role-playing roguelike game set in the world of Eyal."; + type = "Application"; + categories = "Game;RolePlaying;"; + genericName = pname; + }; + +in stdenv.mkDerivation rec { + name = "${pname}-${version}"; + version = "1.5.5"; -stdenv.mkDerivation rec { - version = "1.4.9"; - name = "tome4-${version}"; src = fetchurl { url = "https://te4.org/dl/t-engine/t-engine4-src-${version}.tar.bz2"; - sha256 = "0c82m0g1ps64zghgdrp78m6bvfngcb75whhknqiailld7kz1g9xl"; + sha256 = "0v2qgdfpvdzd1bcbp9v8pfahj1bgczsq2d4xfhh5wg11jgjcwz03"; }; - nativeBuildInputs = [ premake4 ]; + + nativeBuildInputs = [ premake4 makeWrapper unzip ]; + + # tome4 vendors quite a few libraries so someone might want to look into avoiding that... buildInputs = [ mesa_glu openal libpng libvorbis SDL2 SDL2_ttf SDL2_image ]; + + enableParallelBuilding = true; + NIX_CFLAGS_COMPILE = [ "-I${SDL2_image}/include/SDL2" "-I${SDL2_ttf}/include/SDL2" ]; - preConfigure = '' + + postPatch = '' substituteInPlace premake4.lua \ --replace "/opt/SDL-2.0/include/SDL2" "${SDL2.dev}/include/SDL2" \ --replace "/usr/include/GL" "/run/opengl-driver/include" + ''; + + preConfigure = '' premake4 gmake ''; + makeFlags = [ "config=release" ]; + + # The wrapper needs to cd into the correct directory as tome4's detection of + # the game asset root directory is faulty. + installPhase = '' - install -Dm755 t-engine $out/opt/tome4/t-engine - cat > tome4 < -Forwarded: Yes -Applied-Upstream: 2.3.1 -Last-Update: 2016-08-11 -Description: Fix FTBFS with gcc6 - -Index: b/src/ffadotypes.h -=================================================================== ---- a/src/ffadotypes.h -+++ b/src/ffadotypes.h -@@ -51,6 +51,8 @@ struct ffado_handle { - }; - - -+#include -+#include - #include - #include - diff --git a/pkgs/os-specific/linux/ffado/glibc226.patch b/pkgs/os-specific/linux/ffado/glibc226.patch deleted file mode 100644 index e147ee9aa76a..000000000000 --- a/pkgs/os-specific/linux/ffado/glibc226.patch +++ /dev/null @@ -1,10 +0,0 @@ ---- libffado/src/libutil/PosixMessageQueue.cpp (revision 2705) -+++ libffado/src/libutil/PosixMessageQueue.cpp (revision 2706) -@@ -30,6 +30,7 @@ - #include - #include - #include -+#include - - #define MQ_INVALID_ID ((mqd_t) -1) - // one second diff --git a/pkgs/os-specific/linux/firmware/fwupd/default.nix b/pkgs/os-specific/linux/firmware/fwupd/default.nix index 858f1448dfac..646c18860c5d 100644 --- a/pkgs/os-specific/linux/firmware/fwupd/default.nix +++ b/pkgs/os-specific/linux/firmware/fwupd/default.nix @@ -1,50 +1,40 @@ -{ stdenv, fetchurl, fetchpatch, gtk_doc, pkgconfig, gobjectIntrospection, intltool -, libgudev, polkit, appstream-glib, gusb, sqlite, libarchive, glib_networking +{ stdenv, fetchurl, fetchpatch, gtk-doc, pkgconfig, gobjectIntrospection, intltool +, libgudev, polkit, appstream-glib, gusb, sqlite, libarchive, glib-networking , libsoup, help2man, gpgme, libxslt, elfutils, libsmbios, efivar, glibcLocales , fwupdate, libyaml, valgrind, meson, libuuid, colord, docbook_xml_dtd_43, docbook_xsl -, ninja, gcab, gnutls, python3, wrapGAppsHook, json_glib -, shared_mime_info, umockdev +, ninja, gcab, gnutls, python3, wrapGAppsHook, json-glib +, shared-mime-info, umockdev }: let - version = "1.0.4"; + # Updating? Keep $out/etc synchronized with passthru.filesInstalledToEtc + version = "1.0.5"; python = python3.withPackages (p: with p; [ pygobject3 pycairo pillow ]); installedTestsPython = python3.withPackages (p: with p; [ pygobject3 requests ]); in stdenv.mkDerivation { name = "fwupd-${version}"; src = fetchurl { url = "https://people.freedesktop.org/~hughsient/releases/fwupd-${version}.tar.xz"; - sha256 = "1n4d6fw3ffg051072hbxn106s52x2wlh5dh2kxwdfjsb5kh03ra3"; + sha256 = "0wm195vkf6x1kg1dz0sbfwpdcn9f6638l7vyzplcfrb3v07pqxpq"; }; outputs = [ "out" "devdoc" "man" "installedTests" ]; nativeBuildInputs = [ - meson ninja gtk_doc pkgconfig gobjectIntrospection intltool glibcLocales shared_mime_info + meson ninja gtk-doc pkgconfig gobjectIntrospection intltool glibcLocales shared-mime-info valgrind gcab docbook_xml_dtd_43 docbook_xsl help2man libxslt python wrapGAppsHook ]; buildInputs = [ polkit appstream-glib gusb sqlite libarchive libsoup elfutils libsmbios fwupdate libyaml - libgudev colord gpgme libuuid gnutls glib_networking efivar json_glib umockdev + libgudev colord gpgme libuuid gnutls glib-networking efivar json-glib umockdev ]; LC_ALL = "en_US.UTF-8"; # For po/make-images patches = [ ./fix-missing-deps.patch - # https://github.com/hughsie/fwupd/issues/403 (fetchpatch { - url = https://github.com/hughsie/fwupd/commit/bd6082574989e4f48b66c7270bb408d439b77a06.patch; - sha256 = "17pixyizkmn6wlsjmr1wwya17ivn770hdv9mp769vifxinya8w9y"; - }) - # drop docbook2man - (fetchpatch { - url = https://github.com/hughsie/fwupd/commit/2c43d3e6e65868b66a9a64a76123697e259ec7c2.patch; - sha256 = "0vjv7jnai0g96frlipk2sc59pj3mhq9di01hajycjv7y5v6qqrmc"; - }) - # https://github.com/hughsie/fwupd/issues/405 - (fetchpatch { - url = https://github.com/hughsie/fwupd/pull/407.patch; - sha256 = "1dxhqps12x7bz0s974xk5hfpk4nwn1gs29vl0dfi9j54wy18f688"; + url = https://github.com/hughsie/fwupd/commit/767210e4b1401d5d5bb7ac1e7c052a60b6529d88.patch; + sha256 = "00adfabxpgdg74jx7i6jihhh8njjk2r7v3fxqs4scj3vn06k5fmw"; }) ]; @@ -60,7 +50,7 @@ in stdenv.mkDerivation { doCheck = true; preFixup = '' - gappsWrapperArgs+=(--prefix XDG_DATA_DIRS : "${shared_mime_info}/share") + gappsWrapperArgs+=(--prefix XDG_DATA_DIRS : "${shared-mime-info}/share") ''; mesonFlags = [ @@ -77,7 +67,20 @@ in stdenv.mkDerivation { --prefix GI_TYPELIB_PATH : "$out/lib/girepository-1.0:${libsoup}/lib/girepository-1.0" ''; - enableParallelBuilding = true; + passthru = { + filesInstalledToEtc = [ + "fwupd/remotes.d/fwupd.conf" + "fwupd/remotes.d/lvfs-testing.conf" + "fwupd/remotes.d/lvfs.conf" + "fwupd/remotes.d/vendor.conf" + "pki/fwupd/GPG-KEY-Hughski-Limited" + "pki/fwupd/GPG-KEY-Linux-Vendor-Firmware-Service" + "pki/fwupd/LVFS-CA.pem" + "pki/fwupd-metadata/GPG-KEY-Linux-Vendor-Firmware-Service" + "pki/fwupd-metadata/LVFS-CA.pem" + ]; + }; + meta = with stdenv.lib; { homepage = https://fwupd.org/; maintainers = with maintainers; []; diff --git a/pkgs/os-specific/linux/firmware/fwupdate/default.nix b/pkgs/os-specific/linux/firmware/fwupdate/default.nix index f2bb9bddd578..fd0d222eaac8 100644 --- a/pkgs/os-specific/linux/firmware/fwupdate/default.nix +++ b/pkgs/os-specific/linux/firmware/fwupdate/default.nix @@ -1,37 +1,62 @@ -{ stdenv, fetchurl, gnu-efi, efivar, libsmbios, popt, pkgconfig -, gettext }: -let version = "8"; in - stdenv.mkDerivation - { name = "fwupdate-${version}"; - src = fetchurl - { url = "https://github.com/rhinstaller/fwupdate/releases/download/${version}/fwupdate-${version}.tar.bz2"; - sha256 = "10q8k1kghvbcb5fwcl2smzp8vqdfzimx9dkk0c3hz39py1phy4n8"; - }; - makeFlags = - [ "EFIDIR=nixos" - "LIBDIR=$(out)/lib" - "GNUEFIDIR=${gnu-efi}/lib" - "TARGETDIR=$(out)/boot/efi/nixos/" - "prefix=$(out)/" - ]; - nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ gnu-efi libsmbios popt gettext ]; - propagatedBuildInputs = [ efivar ]; - # TODO: Just apply the disable to the efi subdir - hardeningDisable = [ "all" ]; - patchPhase = '' - sed -i 's|/usr/include/smbios_c/token.h|smbios_c/token.h|' \ - linux/libfwup.c - sed -i 's|/usr/share|$(prefix)share|' linux/Makefile - sed -i "s|/usr/include|$out/include|" linux/fwup.pc.in - find . -type f -print0 | xargs -0 sed -i -e 's|/boot/efi|/boot|g' -e 's|/boot/efi/EFI|/boot/EFI|g' - ''; - configurePhase = '' - arch=$(cc -dumpmachine | cut -f1 -d- | sed 's,i[3456789]86,ia32,' ) - export NIX_CFLAGS_COMPILE="$NIX_CFLAGS_COMPILE -I${gnu-efi}/include/efi -I${efivar}/include/efivar -I${gnu-efi}/include/efi/$arch" - ''; - meta = - { license = [ stdenv.lib.licenses.gpl2 ]; - platforms = stdenv.lib.platforms.linux; - }; - } +{ efivar, fetchurl, gettext, gnu-efi, libsmbios, pkgconfig, popt, stdenv }: +let + version = "10"; +in stdenv.mkDerivation { + name = "fwupdate-${version}"; + src = fetchurl { + url = "https://github.com/rhinstaller/fwupdate/releases/download/${version}/fwupdate-${version}.tar.bz2"; + sha256 = "0fpk3q0msq2l0bs2mvk0cqp8jbwnmi17ggc81r4v96h4jxh2rx3k"; + }; + + patches = [ + # https://github.com/rhboot/fwupdate/pull/99 + ./fix-paths.patch + ./do-not-create-sharedstatedir.patch + ]; + + NIX_CFLAGS_COMPILE = [ "-I${gnu-efi}/include/efi" ]; + + # TODO: Just apply the disable to the efi subdir + hardeningDisable = [ "stackprotector" ]; + + makeFlags = [ + "EFIDIR=nixos" + "prefix=$(out)" + "LIBDIR=$(out)/lib" + "GNUEFIDIR=${gnu-efi}/lib" + "ESPMOUNTPOINT=$(out)/boot" + ]; + + nativeBuildInputs = [ + pkgconfig + gettext + ]; + + buildInputs = [ + gnu-efi + libsmbios + popt + ]; + + propagatedBuildInputs = [ + efivar + ]; + + # TODO: fix wrt cross-compilation + preConfigure = '' + arch=$(cc -dumpmachine | cut -f1 -d- | sed 's,i[3456789]86,ia32,' ) + export NIX_CFLAGS_COMPILE="$NIX_CFLAGS_COMPILE -I${gnu-efi}/include/efi/$arch" + ''; + + postInstall = '' + rm -rf $out/src + rm -rf $out/lib/debug + ''; + + meta = with stdenv.lib; { + description = "Tools for using the ESRT and UpdateCapsule() to apply firmware updates"; + maintainers = with maintainers; [ ]; + license = licenses.gpl2; + platforms = platforms.linux; + }; +} diff --git a/pkgs/os-specific/linux/firmware/fwupdate/do-not-create-sharedstatedir.patch b/pkgs/os-specific/linux/firmware/fwupdate/do-not-create-sharedstatedir.patch new file mode 100644 index 000000000000..b8588ef2b11a --- /dev/null +++ b/pkgs/os-specific/linux/firmware/fwupdate/do-not-create-sharedstatedir.patch @@ -0,0 +1,10 @@ +--- a/linux/Makefile ++++ b/linux/Makefile +@@ -131,7 +131,6 @@ + ln -fs $(x) $(patsubst %.so.1.$(VERSION),%.so.1,$(DESTDIR)$(libdir)/$(x)) ;\ + ln -fs $(x) $(patsubst %.so.1.$(VERSION),%.so,$(DESTDIR)$(libdir)/$(x)) ;\ + ) +- $(INSTALL) -d -m 755 $(DESTDIR)$(sharedstatedir)/fwupdate/ + $(INSTALL) -d -m 755 $(DESTDIR)$(libexecdir)/fwupdate/ + $(INSTALL) -m 755 cleanup $(DESTDIR)$(libexecdir)/fwupdate/cleanup + $(INSTALL) -d -m 755 $(DESTDIR)$(libdatadir)/systemd/system diff --git a/pkgs/os-specific/linux/firmware/fwupdate/fix-paths.patch b/pkgs/os-specific/linux/firmware/fwupdate/fix-paths.patch new file mode 100644 index 000000000000..b01dfa355ef7 --- /dev/null +++ b/pkgs/os-specific/linux/firmware/fwupdate/fix-paths.patch @@ -0,0 +1,116 @@ +--- a/Make.defaults ++++ b/Make.defaults +@@ -18,19 +18,20 @@ + ABIDIFF := abidiff + ABIDW := abidw + prefix ?= /usr/ +-prefix := $(abspath $(prefix))/ ++prefix := $(abspath $(prefix)) ++exec_prefix ?= $(prefix) + ARCH = $(shell $(CC) -dumpmachine | cut -f1 -d- | sed s,i[3456789]86,ia32,) + ifeq ($(ARCH),x86_64) +- LIBDIR ?= $(prefix)lib64 ++ LIBDIR ?= $(exec_prefix)/lib64 + endif + ifeq ($(ARCH),ia32) +- LIBDIR ?= $(prefix)lib ++ LIBDIR ?= $(exec_prefix)/lib + endif + ifeq ($(ARCH),aarch64) +- LIBDIR ?= $(prefix)lib64 ++ LIBDIR ?= $(exec_prefix)/lib64 + endif + ifeq ($(ARCH),arm) +- LIBDIR ?= $(prefix)lib ++ LIBDIR ?= $(exec_prefix)/lib + endif + LIBDIR ?= unknown + ifeq ($(LIBDIR),unknown) +@@ -45,13 +46,13 @@ + GNUEFIDIR ?= $(LIBDIR)/gnuefi + libdir ?= $(LIBDIR) + pcdir ?= $(libdir)/pkgconfig +-mandir ?= $(prefix)share/man +-includedir ?= $(prefix)include +-bindir ?= $(prefix)bin +-datadir ?= $(prefix)share ++mandir ?= $(prefix)/share/man ++includedir ?= $(prefix)/include ++bindir ?= $(exec_prefix)/bin ++datadir ?= $(prefix)/share + localedir ?= $(datadir)/locale +-libexecdir ?= $(prefix)libexec +-libdatadir ?= $(prefix)lib ++libexecdir ?= $(exec_prefix)/libexec ++libdatadir ?= $(exec_prefix)/lib + sharedstatedir ?= /var/lib + + EFIDIR ?= $(shell x=$$(which --skip-alias --skip-functions git 2>/dev/null) ; [ -n "$$x" ] && git config --get fwupdate.efidir) +@@ -63,8 +64,8 @@ + ESPMOUNTPOINT = "/boot/efi" + endif + +-DEBUGINFO ?= $(prefix)lib/debug +-DEBUGSOURCE ?= $(prefix)src/debug ++DEBUGINFO ?= $(exec_prefix)/lib/debug ++DEBUGSOURCE ?= $(prefix)/src/debug + TARGETDIR ?= $(ESPMOUNTPOINT)/EFI/$(EFIDIR) + + .PHONY: check_efidir_error +--- a/linux/Makefile ++++ b/linux/Makefile +@@ -93,16 +93,19 @@ + sed -e "s,@@VERSION@@,$(VERSION),g" \ + -e "s,@@FWUP_MAJOR_VERSION@@,$(MAJOR_VERSION),g" \ + -e "s,@@FWUP_MINOR_VERSION@@,$(MINOR_VERSION),g" \ ++ -e "s,@@PREFIX@@,$(prefix),g" \ ++ -e "s,@@EXEC_PREFIX@@,$(exec_prefix),g" \ + -e "s,@@SHAREDSTATEDIR@@,$(sharedstatedir),g" \ + -e "s,@@ESPMOUNTPOINT@@,$(ESPMOUNTPOINT),g" \ + -e "s,@@EFIDIR@@,$(EFIDIR),g" \ + -e "s,@@LIBDIR@@,$(libdir),g" \ + -e "s,@@LIBEXECDIR@@,$(libexecdir),g" \ ++ -e "s,@@INCLUDEDIR@@,$(includedir),g" \ + $< > $@ + + tester : tester.c +- $(CC) -Wall -Werror -ggdb -L. -I./include -I/usr/include/efivar \ +- -lefivar -lfwup -o $@ $^ ++ $(CC) -Wall -Werror -ggdb -L. -I./include $(shell $(PKG_CONFIG) --cflags efivar) \ ++ $(shell $(PKG_CONFIG) --libs efivar) -lfwup -o $@ $^ + + test : tester + LD_LIBRARY_PATH=$(shell pwd) ./tester +@@ -134,6 +137,6 @@ + $(INSTALL) -d -m 755 $(DESTDIR)$(libdatadir)/systemd/system + $(INSTALL) -m 644 cleanup.service \ + $(DESTDIR)$(libdatadir)/systemd/system/fwupdate-cleanup.service +- $(INSTALL) -d -m 755 $(DESTDIR)/usr/share/bash-completion/completions/ ++ $(INSTALL) -d -m 755 $(DESTDIR)$(datadir)/bash-completion/completions/ + $(INSTALL) -m 755 $(VPATH)/bash-completion \ +- $(DESTDIR)/usr/share/bash-completion/completions/fwupdate ++ $(DESTDIR)$(datadir)/bash-completion/completions/fwupdate +--- a/linux/fwup.pc.in ++++ b/linux/fwup.pc.in +@@ -1,7 +1,7 @@ +-prefix=/usr +-exec_prefix=/usr ++prefix=@@PREFIX@@ ++exec_prefix=@@EXEC_PREFIX@@ + libdir=@@LIBDIR@@ +-includedir=/usr/include ++includedir=@@INCLUDEDIR@@ + + Name: fwup + Description: Library for deployment of UEFI firmware updates. +--- a/linux/libfwup.c ++++ b/linux/libfwup.c +@@ -35,7 +35,7 @@ + + #include + #ifdef FWUPDATE_HAVE_LIBSMBIOS__ +-#include ++#include + #include + #endif + diff --git a/pkgs/os-specific/linux/hal-flash/default.nix b/pkgs/os-specific/linux/hal-flash/default.nix index a299fd0f4338..27b85fbfc89a 100644 --- a/pkgs/os-specific/linux/hal-flash/default.nix +++ b/pkgs/os-specific/linux/hal-flash/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, autoconf, automake, dbus, glib, libtool, pkgconfig, udisks2 }: stdenv.mkDerivation { - name = "hal-flash-0.3.0"; + name = "hal-flash-0.3.3"; src = fetchurl { - url = "https://github.com/cshorler/hal-flash/archive/v0.3.0.tar.gz"; - sha256 = "163pqy39cca8cnf8rm8zr63ndsnr7rki9pf9j7dl9gyxmi7sx88s"; + url = "https://github.com/cshorler/hal-flash/archive/v0.3.3.tar.gz"; + sha256 = "0dw9bx190mrh0dycw4rfvfmwwvh2sgypffr99nfnr36b38jrd6y6"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/os-specific/linux/hwdata/default.nix b/pkgs/os-specific/linux/hwdata/default.nix index 8ebce1965301..6f2dc807fbab 100644 --- a/pkgs/os-specific/linux/hwdata/default.nix +++ b/pkgs/os-specific/linux/hwdata/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "hwdata-${version}"; - version = "0.308"; + version = "0.309"; src = fetchurl { - url = "https://github.com/vcrhonek/hwdata/archive/v0.308.tar.gz"; - sha256 = "17zcwplw41dfwb2l9jfgvm65rjzlsbv30f56d6vgiix042f92vcq"; + url = "https://github.com/vcrhonek/hwdata/archive/v0.309.tar.gz"; + sha256 = "1njx4lhg7a0cawz82x535vk4mslmnfj7nmf8dbq8kgqxiqh6h2c7"; }; preConfigure = "patchShebangs ./configure"; diff --git a/pkgs/os-specific/linux/iio-sensor-proxy/default.nix b/pkgs/os-specific/linux/iio-sensor-proxy/default.nix index cdcae22a18e9..0ccc8acfdca9 100644 --- a/pkgs/os-specific/linux/iio-sensor-proxy/default.nix +++ b/pkgs/os-specific/linux/iio-sensor-proxy/default.nix @@ -1,15 +1,15 @@ { stdenv, fetchFromGitHub, autoconf-archive, gettext, libtool, intltool, autoconf, automake -, glib, gtk3, gtk_doc, libgudev, pkgconfig, systemd }: +, glib, gtk3, gtk-doc, libgudev, pkgconfig, systemd }: stdenv.mkDerivation rec { name = "iio-sensor-proxy-${version}"; - version = "2.2"; + version = "2.4"; src = fetchFromGitHub { owner = "hadess"; repo = "iio-sensor-proxy"; rev = version; - sha256 = "1x0whwm2r9g50hq5px0bgsrigy8naihqgi6qm0x5q87jz5lkhrnv"; + sha256 = "1c8izq73c00gvv0jc6zby5hcircs4cb16a1d3ivp1i1iflknj46n"; }; configurePhase = '' @@ -21,7 +21,7 @@ stdenv.mkDerivation rec { buildInputs = [ glib gtk3 - gtk_doc + gtk-doc libgudev systemd ]; diff --git a/pkgs/os-specific/linux/ipset/default.nix b/pkgs/os-specific/linux/ipset/default.nix index 6039ada44e24..c78a4eadfa4e 100644 --- a/pkgs/os-specific/linux/ipset/default.nix +++ b/pkgs/os-specific/linux/ipset/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, pkgconfig, libmnl }: stdenv.mkDerivation rec { - name = "ipset-6.34"; + name = "ipset-6.35"; src = fetchurl { url = "http://ipset.netfilter.org/${name}.tar.bz2"; - sha256 = "106nv1ngcvap0mqmb6jm07lc1q3w796rkzc1vrfs4yhbcwdq63np"; + sha256 = "1p7l1fj3lbv6rr24zxjiwq7jk1yvazk8db6yyni0qbprw49i01rp"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/os-specific/linux/kbd/default.nix b/pkgs/os-specific/linux/kbd/default.nix index b97f48af414a..d1e40371e370 100644 --- a/pkgs/os-specific/linux/kbd/default.nix +++ b/pkgs/os-specific/linux/kbd/default.nix @@ -32,7 +32,7 @@ stdenv.mkDerivation rec { # We get a warning in armv5tel-linux and the fuloong2f, so we # disable -Werror in it. - ${stdenv.lib.optionalString (stdenv.isArm || stdenv.system == "mips64el-linux") '' + ${stdenv.lib.optionalString (stdenv.isArm || stdenv.hostPlatform.isMips) '' sed -i s/-Werror// src/Makefile.am ''} ''; diff --git a/pkgs/os-specific/linux/kernel-headers/default.nix b/pkgs/os-specific/linux/kernel-headers/default.nix index b95013ab26dc..8107f7d96575 100644 --- a/pkgs/os-specific/linux/kernel-headers/default.nix +++ b/pkgs/os-specific/linux/kernel-headers/default.nix @@ -55,12 +55,7 @@ let }; in { - linuxHeaders_4_4 = common { - version = "4.4.10"; - sha256 = "1kpjvvd9q9wwr3314q5ymvxii4dv2d27295bzly225wlc552xhja"; - }; - - linuxHeaders_4_15 = common { + linuxHeaders = common { version = "4.15"; sha256 = "0sd7l9n9h7vf9c6gd6ciji28hawda60yj0llh17my06m0s4lf9js"; }; diff --git a/pkgs/os-specific/linux/kernel/common-config.nix b/pkgs/os-specific/linux/kernel/common-config.nix index 968fb195d2a2..5fbd9955c2a3 100644 --- a/pkgs/os-specific/linux/kernel/common-config.nix +++ b/pkgs/os-specific/linux/kernel/common-config.nix @@ -134,6 +134,7 @@ with stdenv.lib; ''} NETFILTER y NETFILTER_ADVANCED y + CGROUP_BPF? y # Required by systemd per-cgroup firewalling IP_ROUTE_VERBOSE y IP_MROUTE_MULTIPLE_TABLES y IP_VS_PROTO_TCP y @@ -450,6 +451,7 @@ with stdenv.lib; RC_DEVICES? y # Enable IR devices RT2800USB_RT55XX y SCHED_AUTOGROUP y + CFS_BANDWIDTH y SCSI_LOGGING y # SCSI logging facility SERIAL_8250 y # 8250/16550 and compatible serial support SLIP_COMPRESSED y # CSLIP compressed headers diff --git a/pkgs/os-specific/linux/kernel/generic.nix b/pkgs/os-specific/linux/kernel/generic.nix index 8aa813cb195a..f69865cdc4df 100644 --- a/pkgs/os-specific/linux/kernel/generic.nix +++ b/pkgs/os-specific/linux/kernel/generic.nix @@ -4,15 +4,10 @@ , utillinux , writeTextFile, ubootTools , callPackage -, overrideCC, gcc7 }: { stdenv, buildPackages, perl, buildLinux -, # Allow really overriding even our gcc7 default. - # We want gcc >= 7.3 to enable the "retpoline" mitigation of security problems. - stdenvNoOverride ? overrideCC stdenv buildPackages.gcc7 - , # The kernel source tarball. src @@ -37,14 +32,12 @@ # optionally be compressed with gzip or bzip2. kernelPatches ? [] , ignoreConfigErrors ? hostPlatform.platform.name != "pc" || - hostPlatform != stdenvNoOverride.buildPlatform + hostPlatform != stdenv.buildPlatform , extraMeta ? {} , hostPlatform , ... } @ args: -let stdenv = stdenvNoOverride; in # finish the rename - assert stdenv.isLinux; let diff --git a/pkgs/os-specific/linux/kernel/linux-4.13.nix b/pkgs/os-specific/linux/kernel/linux-4.13.nix deleted file mode 100644 index e89222b2c629..000000000000 --- a/pkgs/os-specific/linux/kernel/linux-4.13.nix +++ /dev/null @@ -1,17 +0,0 @@ -{ stdenv, buildPackages, hostPlatform, fetchurl, perl, buildLinux, ... } @ args: - -buildLinux (args // rec { - version = "4.13.16"; - extraMeta.branch = "4.13"; - - # TODO: perhaps try being more concrete (ideally CVE numbers). - extraMeta.knownVulnerabilities = [ - "ALSA: usb-audio: Fix potential out-of-bound access at parsing SU" - "eCryptfs: use after free in ecryptfs_release_messaging()" - ]; - - src = fetchurl { - url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "0cf7prqzl1ajbgl98w0symdyn0k5wl5xaf1l5ldgy6l083yg69dh"; - }; -} // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-4.14.nix b/pkgs/os-specific/linux/kernel/linux-4.14.nix index b5fd5168cf82..ab2201953864 100644 --- a/pkgs/os-specific/linux/kernel/linux-4.14.nix +++ b/pkgs/os-specific/linux/kernel/linux-4.14.nix @@ -3,13 +3,13 @@ with stdenv.lib; buildLinux (args // rec { - version = "4.14.20"; + version = "4.14.23"; # branchVersion needs to be x.y extraMeta.branch = concatStrings (intersperse "." (take 2 (splitString "." version))); src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "14njnspxmyzpapjzm8macrv411ss63xb39nb00xix75glqmg9dsa"; + sha256 = "1jhjazzaw5m92jl7cbchzfg5fyci7fp285bilydfvaibb9avb5ws"; }; } // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-4.15.nix b/pkgs/os-specific/linux/kernel/linux-4.15.nix index 4bdcfba5db73..1c4889892439 100644 --- a/pkgs/os-specific/linux/kernel/linux-4.15.nix +++ b/pkgs/os-specific/linux/kernel/linux-4.15.nix @@ -3,7 +3,7 @@ with stdenv.lib; buildLinux (args // rec { - version = "4.15.4"; + version = "4.15.7"; # modDirVersion needs to be x.y.z, will automatically add .0 if needed modDirVersion = concatStrings (intersperse "." (take 3 (splitString "." "${version}.0"))); @@ -13,6 +13,6 @@ buildLinux (args // rec { src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "0fla9k90y6vaqvyjk81f59smcifcwickx4yr662m4whzkhd7wgd2"; + sha256 = "1in8gy82ccpri7xhbgim3jrh15lbfrfzjgg69g0yvq534d5xyi6d"; }; } // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-4.4.nix b/pkgs/os-specific/linux/kernel/linux-4.4.nix index 94425f4d1e47..5d7f2fbfe74d 100644 --- a/pkgs/os-specific/linux/kernel/linux-4.4.nix +++ b/pkgs/os-specific/linux/kernel/linux-4.4.nix @@ -1,11 +1,11 @@ { stdenv, buildPackages, hostPlatform, fetchurl, perl, buildLinux, ... } @ args: buildLinux (args // rec { - version = "4.4.116"; + version = "4.4.119"; extraMeta.branch = "4.4"; src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "18sz68gbms5rvjiy51b1dg1jlr7pwazw9fg6q5ffczk22icflvsn"; + sha256 = "1rj3hk31bx9nvpx0dmwiijyixiv0dcxvp2cx4fbkbs9fddxrn7sg"; }; } // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-4.9.nix b/pkgs/os-specific/linux/kernel/linux-4.9.nix index 80db885170e4..5c5363ccded7 100644 --- a/pkgs/os-specific/linux/kernel/linux-4.9.nix +++ b/pkgs/os-specific/linux/kernel/linux-4.9.nix @@ -1,11 +1,11 @@ { stdenv, buildPackages, hostPlatform, fetchurl, perl, buildLinux, ... } @ args: buildLinux (args // rec { - version = "4.9.82"; + version = "4.9.85"; extraMeta.branch = "4.9"; src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "105im51ax2cwfqkljfi1sqh6sap6sc76zh5l9n7fpbys04khnwab"; + sha256 = "1hb5v5ycgg5wbv28s8vxw804blfshpf82chrwspdbl2vwkp17zl0"; }; } // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-copperhead-hardened.nix b/pkgs/os-specific/linux/kernel/linux-copperhead-hardened.nix index 0e39bc421c95..85d31048ffc2 100644 --- a/pkgs/os-specific/linux/kernel/linux-copperhead-hardened.nix +++ b/pkgs/os-specific/linux/kernel/linux-copperhead-hardened.nix @@ -3,9 +3,9 @@ with stdenv.lib; let - version = "4.15.4"; + version = "4.15.7"; revision = "a"; - sha256 = "0j7nla8vjrxr82nfx8dl34qk8b56piwqbndqch9rv7plgl30hkj7"; + sha256 = "19kgy1fa4flnqm3a50hilgjczqkscay10183cvkzy3vxrnf8fl0f"; # modVersion needs to be x.y.z, will automatically add .0 if needed modVersion = concatStrings (intersperse "." (take 3 (splitString "." "${version}.0"))); diff --git a/pkgs/os-specific/linux/kernel/linux-riscv.nix b/pkgs/os-specific/linux/kernel/linux-riscv.nix index b2eb0a69a8ec..45795e24c542 100644 --- a/pkgs/os-specific/linux/kernel/linux-riscv.nix +++ b/pkgs/os-specific/linux/kernel/linux-riscv.nix @@ -1,15 +1,15 @@ { stdenv, buildPackages, hostPlatform, fetchFromGitHub, perl, buildLinux, libelf, utillinux, ... } @ args: buildLinux (args // rec { - version = "4.16-rc1"; - modDirVersion = "4.16.0-rc1"; + version = "4.16-rc2"; + modDirVersion = "4.16.0-rc2"; extraMeta.branch = "4.16"; src = fetchFromGitHub { - owner = "riscv"; + owner = "shlevy"; repo ="riscv-linux"; - rev = "a31991a9c6ce2c86fd676cf458a0ec10edc20d37"; - sha256 = "0n97wfbi3pnp5c70xfj7s0fk8zjjkjz6ldxh7n54kbf64l4in01f"; + rev = "f0c42cff9292c0a8e6ca702a54aafa04b35758a6"; + sha256 = "050mdciyz1595z81zsss0v9vqsaysppyzqaqpfs5figackifv3iv"; }; # Should the testing kernels ever be built on Hydra? diff --git a/pkgs/os-specific/linux/kernel/patches.nix b/pkgs/os-specific/linux/kernel/patches.nix index 42e14ad7c40b..e163459d7f4f 100644 --- a/pkgs/os-specific/linux/kernel/patches.nix +++ b/pkgs/os-specific/linux/kernel/patches.nix @@ -73,33 +73,4 @@ rec { }; }; - riscv_modules = { - name = "riscv-modules"; - patch = ./riscv-modules.patch; - }; - - # http://lists.infradead.org/pipermail/linux-riscv/2018-February/000054.html - riscv_irq_busy = { - name = "riscv-irq-busy"; - patch = ./riscv-irq-busy.patch; - }; - - # http://lists.infradead.org/pipermail/linux-riscv/2018-February/000059.html - riscv_install = { - name = "riscv-install"; - patch = ./riscv-install.patch; - }; - - # http://lists.infradead.org/pipermail/linux-riscv/2018-February/000056.html - riscv_initrd = { - name = "riscv-initrd"; - patch = ./riscv-initrd.patch; - }; - - # http://lists.infradead.org/pipermail/linux-riscv/2018-February/000058.html - riscv_initrd_free = { - name = "riscv-initrd-free"; - patch = ./riscv-initrd-free.patch; - }; - } diff --git a/pkgs/os-specific/linux/kernel/riscv-initrd-free.patch b/pkgs/os-specific/linux/kernel/riscv-initrd-free.patch deleted file mode 100644 index 680448385246..000000000000 --- a/pkgs/os-specific/linux/kernel/riscv-initrd-free.patch +++ /dev/null @@ -1,21 +0,0 @@ -commit b1fbec8b74ace263ce1371e6bcfdd1dd71b52070 -Author: Shea Levy -Date: Tue Feb 20 08:48:12 2018 -0500 - - riscv: Implement free_initrd_mem. - - v2: Remove incorrect page alignment. - - Signed-off-by: Shea Levy - -diff --git a/arch/riscv/mm/init.c b/arch/riscv/mm/init.c -index c77df8142be2..1b6daa5184e0 100644 ---- a/arch/riscv/mm/init.c -+++ b/arch/riscv/mm/init.c -@@ -66,5 +66,6 @@ void free_initmem(void) - #ifdef CONFIG_BLK_DEV_INITRD - void free_initrd_mem(unsigned long start, unsigned long end) - { -+ free_reserved_area((void *)start, (void *)end, -1, "initrd"); - } - #endif /* CONFIG_BLK_DEV_INITRD */ diff --git a/pkgs/os-specific/linux/kernel/riscv-initrd.patch b/pkgs/os-specific/linux/kernel/riscv-initrd.patch deleted file mode 100644 index 2313e7645843..000000000000 --- a/pkgs/os-specific/linux/kernel/riscv-initrd.patch +++ /dev/null @@ -1,48 +0,0 @@ -commit 1e5f6473492f41355289d022003a049ebf8995fa -Author: Shea Levy -Date: Tue Feb 20 07:52:14 2018 -0500 - - riscv: Respect the initrd found in the dt, if any. - - Signed-off-by: Shea Levy - -diff --git a/arch/riscv/kernel/setup.c b/arch/riscv/kernel/setup.c -index 41d34008faf6..c4ebc907af34 100644 ---- a/arch/riscv/kernel/setup.c -+++ b/arch/riscv/kernel/setup.c -@@ -88,15 +88,20 @@ static void __init setup_initrd(void) - extern unsigned long __initramfs_size; - unsigned long size; - -+ if (initrd_start) -+ goto found; -+ - if (__initramfs_size > 0) { - initrd_start = (unsigned long)(&__initramfs_start); - initrd_end = initrd_start + __initramfs_size; - } - -+ initrd_below_start_ok = 1; - if (initrd_start >= initrd_end) { - printk(KERN_INFO "initrd not found or empty"); - goto disable; - } -+found: - if (__pa(initrd_end) > PFN_PHYS(max_low_pfn)) { - printk(KERN_ERR "initrd extends beyond end of memory"); - goto disable; -@@ -104,13 +109,13 @@ static void __init setup_initrd(void) - - size = initrd_end - initrd_start; - memblock_reserve(__pa(initrd_start), size); -- initrd_below_start_ok = 1; - - printk(KERN_INFO "Initial ramdisk at: 0x%p (%lu bytes)\n", - (void *)(initrd_start), size); - return; - disable: - pr_cont(" - disabling initrd\n"); -+ initrd_below_start_ok = 0; - initrd_start = 0; - initrd_end = 0; - } diff --git a/pkgs/os-specific/linux/kernel/riscv-install.patch b/pkgs/os-specific/linux/kernel/riscv-install.patch deleted file mode 100644 index 707230e9a336..000000000000 --- a/pkgs/os-specific/linux/kernel/riscv-install.patch +++ /dev/null @@ -1,65 +0,0 @@ -commit 365fc1312f4911bfae25c5914c398f9aca21948f -Author: Shea Levy -Date: Mon Feb 19 10:50:58 2018 -0500 - - riscv: Add install target to Makefile. - - Signed-off-by: Shea Levy - -diff --git a/arch/riscv/Makefile b/arch/riscv/Makefile -index 6719dd30ec5b..26892daefa05 100644 ---- a/arch/riscv/Makefile -+++ b/arch/riscv/Makefile -@@ -70,3 +70,7 @@ core-y += arch/riscv/kernel/ arch/riscv/mm/ - libs-y += arch/riscv/lib/ - - all: vmlinux -+ -+PHONY += install -+install: vmlinux -+ sh $(srctree)/arch/riscv/install.sh $(KERNELRELEASE) $< System.map "$(INSTALL_PATH)" -diff --git a/arch/riscv/install.sh b/arch/riscv/install.sh -new file mode 100644 -index 000000000000..8b3155a11a4a ---- /dev/null -+++ b/arch/riscv/install.sh -@@ -0,0 +1,39 @@ -+#!/bin/sh -+# -+# arch/riscv/install.sh -+# -+# This file is subject to the terms and conditions of the GNU General Public -+# License. See the file "COPYING" in the main directory of this archive -+# for more details. -+# -+# Copyright (C) 1995 by Linus Torvalds -+# -+# Adapted from code in arch/ia64/Makefile by Shea Levy -+# -+# "make install" script for riscv architecture -+# -+# Arguments: -+# $1 - kernel version -+# $2 - kernel image file -+# $3 - kernel map file -+# $4 - default install path (blank if root directory) -+# -+ -+# User may have a custom install script -+ -+if [ -x ~/bin/${INSTALLKERNEL} ]; then exec ~/bin/${INSTALLKERNEL} "$@"; fi -+if [ -x /sbin/${INSTALLKERNEL} ]; then exec /sbin/${INSTALLKERNEL} "$@"; fi -+ -+# Default install - no bootloader configuration (yet?) -+base=$(basename $2) -+ -+if [ -f $4/$base ]; then -+ mv $4/$base $4/$base.old -+fi -+ -+if [ -f $4/System.map ]; then -+ mv $4/System.map $4/System.old -+fi -+ -+cat $2 > $4/$base -+cp $3 $4/System.map diff --git a/pkgs/os-specific/linux/kernel/riscv-irq-busy.patch b/pkgs/os-specific/linux/kernel/riscv-irq-busy.patch deleted file mode 100644 index 5f5e8f0c8b7b..000000000000 --- a/pkgs/os-specific/linux/kernel/riscv-irq-busy.patch +++ /dev/null @@ -1,42 +0,0 @@ -commit 2603e6087b26e9428b806b267aee6bcb919abcea -Author: Shea Levy -Date: Sun Feb 18 20:08:30 2018 -0500 - - set_handle_irq: Return EBUSY if the handler has already been registered. - - This is what's expected by the comments and at least by irq-riscv-intc.c - - Signed-off-by: Shea Levy - -diff --git a/include/linux/irq.h b/include/linux/irq.h -index 2930fd2572e4..77e97872a13e 100644 ---- a/include/linux/irq.h -+++ b/include/linux/irq.h -@@ -1179,7 +1179,7 @@ int ipi_send_mask(unsigned int virq, const struct cpumask *dest); - * Returns 0 on success, or -EBUSY if an IRQ handler has already been - * registered. - */ --void __init set_handle_irq(void (*handle_irq)(struct pt_regs *)); -+int __init set_handle_irq(void (*handle_irq)(struct pt_regs *)); - - /* - * Allows interrupt handlers to find the irqchip that's been registered as the -diff --git a/kernel/irq/handle.c b/kernel/irq/handle.c -index dee4f9a172ca..3570c715c3e7 100644 ---- a/kernel/irq/handle.c -+++ b/kernel/irq/handle.c -@@ -213,11 +213,12 @@ irqreturn_t handle_irq_event(struct irq_desc *desc) - } - - #ifdef CONFIG_GENERIC_IRQ_MULTI_HANDLER --void __init set_handle_irq(void (*handle_irq)(struct pt_regs *)) -+int __init set_handle_irq(void (*handle_irq)(struct pt_regs *)) - { - if (handle_arch_irq) -- return; -+ return -EBUSY; - - handle_arch_irq = handle_irq; -+ return 0; - } - #endif diff --git a/pkgs/os-specific/linux/kernel/riscv-modules.patch b/pkgs/os-specific/linux/kernel/riscv-modules.patch deleted file mode 100644 index 6d5356e0e46f..000000000000 --- a/pkgs/os-specific/linux/kernel/riscv-modules.patch +++ /dev/null @@ -1,11 +0,0 @@ -diff -Naur linux-4.15.4-orig/arch/riscv/configs/defconfig linux-4.15.4/arch/riscv/configs/defconfig ---- linux-4.15.4-orig/arch/riscv/configs/defconfig 2018-02-16 14:07:01.000000000 -0500 -+++ linux-4.15.4/arch/riscv/configs/defconfig 2018-02-18 18:33:09.488431900 -0500 -@@ -12,6 +12,7 @@ - CONFIG_NAMESPACES=y - CONFIG_USER_NS=y - CONFIG_BLK_DEV_INITRD=y -+CONFIG_MODULES=y - CONFIG_EXPERT=y - CONFIG_CHECKPOINT_RESTORE=y - CONFIG_BPF_SYSCALL=y diff --git a/pkgs/os-specific/linux/libsepol/default.nix b/pkgs/os-specific/linux/libsepol/default.nix index 0417bf59cfa3..f7f393afb39d 100644 --- a/pkgs/os-specific/linux/libsepol/default.nix +++ b/pkgs/os-specific/linux/libsepol/default.nix @@ -18,6 +18,8 @@ stdenv.mkDerivation rec { makeFlagsArray+=("DESTDIR=$out") ''; + NIX_CFLAGS_COMPILE = [ "-Wno-error=implicit-fallthrough" ]; + passthru = { inherit se_release se_url; }; meta = with stdenv.lib; { diff --git a/pkgs/os-specific/linux/libsmbios/default.nix b/pkgs/os-specific/linux/libsmbios/default.nix index 5d3e0dc8c975..62898675f2be 100644 --- a/pkgs/os-specific/linux/libsmbios/default.nix +++ b/pkgs/os-specific/linux/libsmbios/default.nix @@ -1,38 +1,37 @@ -{ stdenv, fetchFromGitHub, pkgconfig, autoreconfHook, libtool, gettext +{ stdenv, fetchFromGitHub, pkgconfig, autoreconfHook, help2man, gettext , libxml2, perl, doxygen }: stdenv.mkDerivation rec { name = "libsmbios-${version}"; - version = "2.3.3"; + version = "2.4.1"; src = fetchFromGitHub { owner = "dell"; repo = "libsmbios"; rev = "v${version}"; - sha256 = "1cl5nb6qk8ki87hwqf9n1dd9nlhkjnlpdxlhzvm82za16gs7apkl"; + sha256 = "158w5fz777is7nr5yhpr69b17nn6i1pavycxq1q9899frrpkzbsc"; }; - nativeBuildInputs = [ autoreconfHook doxygen gettext libtool perl pkgconfig ]; - buildInputs = [ libxml2 ]; + nativeBuildInputs = [ autoreconfHook doxygen gettext libxml2 help2man perl pkgconfig ]; configureFlags = [ "--disable-python" "--disable-graphviz" ]; enableParallelBuilding = true; - postInstall = - '' - mkdir -p $out/include - cp -a src/include/smbios_c $out/include/ - cp -a out/public-include/smbios_c $out/include/ - ''; + postInstall = '' + mkdir -p $out/include + cp -a src/include/smbios_c $out/include/ + cp -a out/public-include/smbios_c $out/include/ + ''; preFixup = ''rm -rf "$(pwd)" ''; # Hack to avoid TMPDIR in RPATHs - meta = { + meta = with stdenv.lib; { homepage = https://github.com/dell/libsmbios; description = "A library to obtain BIOS information"; - license = with stdenv.lib.licenses; [ osl21 gpl2Plus ]; + license = with licenses; [ osl21 gpl2Plus ]; + maintainers = with maintainers; [ ]; platforms = [ "i686-linux" "x86_64-linux" ]; }; } diff --git a/pkgs/os-specific/linux/mbpfan/default.nix b/pkgs/os-specific/linux/mbpfan/default.nix index 200654909c28..a825314683ea 100644 --- a/pkgs/os-specific/linux/mbpfan/default.nix +++ b/pkgs/os-specific/linux/mbpfan/default.nix @@ -2,12 +2,12 @@ stdenv.mkDerivation rec { name = "mbpfan-${version}"; - version = "2.0.1"; + version = "2.0.2"; src = fetchFromGitHub { owner = "dgraziotin"; repo = "mbpfan"; rev = "v${version}"; - sha256 = "1iri1py9ym0zz7fcacbf0d9y3i3ay77jmajckchagamkfha16zyp"; + sha256 = "1l8fj92jxfp0sldvznsdsm3pn675b35clq3371h6d5wk4jx67fvg"; }; installPhase = '' mkdir -p $out/bin $out/etc diff --git a/pkgs/os-specific/linux/mcelog/default.nix b/pkgs/os-specific/linux/mcelog/default.nix index a65f983bb36d..ac176c7d3b36 100644 --- a/pkgs/os-specific/linux/mcelog/default.nix +++ b/pkgs/os-specific/linux/mcelog/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "mcelog-${version}"; - version = "153"; + version = "154"; src = fetchFromGitHub { owner = "andikleen"; repo = "mcelog"; rev = "v${version}"; - sha256 = "1wz55dzqdiam511d6p1958al6vzlhrhs73s7gly0mzm6kpji0gxa"; + sha256 = "0vq7r3zknr62rmi9g0zd7mmxframm79vmrdw029pc7z6wrlv40cy"; }; postPatch = '' diff --git a/pkgs/os-specific/linux/musl/default.nix b/pkgs/os-specific/linux/musl/default.nix index f74ac9c41eee..0f8f088945aa 100644 --- a/pkgs/os-specific/linux/musl/default.nix +++ b/pkgs/os-specific/linux/musl/default.nix @@ -20,11 +20,11 @@ let in stdenv.mkDerivation rec { name = "musl-${version}"; - version = "1.1.18"; + version = "1.1.19"; src = fetchurl { url = "http://www.musl-libc.org/releases/musl-${version}.tar.gz"; - sha256 = "0651lnj5spckqjf83nz116s8qhhydgqdy3rkl4icbh5f05fyw5yh"; + sha256 = "1nf1wh44bhm8gdcfr75ayib29b99vpq62zmjymrq7f96h9bshnfv"; }; enableParallelBuilding = true; @@ -47,8 +47,6 @@ stdenv.mkDerivation rec { outputs = [ "out" "dev" ]; - patches = [ ./few-more-uapi-fixes.patch ]; - dontDisableStatic = true; dontStrip = true; diff --git a/pkgs/os-specific/linux/musl/few-more-uapi-fixes.patch b/pkgs/os-specific/linux/musl/few-more-uapi-fixes.patch deleted file mode 100644 index f84ca2c5aec8..000000000000 --- a/pkgs/os-specific/linux/musl/few-more-uapi-fixes.patch +++ /dev/null @@ -1,71 +0,0 @@ -http://www.openwall.com/lists/musl/2018/01/06/3 - -Date: Sat, 6 Jan 2018 23:32:52 +0100 -From: Hauke Mehrtens -To: musl@...ts.openwall.com -Cc: felix.janda@...teo.de, - Hauke Mehrtens -Subject: [PATCH v2] Add additional uapi guards for Linux kernel header files - -With Linux kernel 4.16 it will be possible to guard more parts of the -Linux header files from a libc. Make use of this in musl to guard all -the structures and other definitions from the Linux header files which -are also defined by the header files provided by musl. This will make -musl compile with the unmodified Linux kernel user space headers. - -This extends the definitions done in commit 04983f227238 ("make -netinet/in.h suppress clashing definitions from kernel headers") - -The needed patches were recently accepted into the netdev tree and will be integrated in Linux 4.16: -https://patchwork.ozlabs.org/patch/854342/ -https://patchwork.ozlabs.org/patch/855293/ ---- - include/net/if.h | 7 +++++++ - include/netinet/if_ether.h | 1 + - include/sys/xattr.h | 2 ++ - 3 files changed, 10 insertions(+) - -diff --git a/include/net/if.h b/include/net/if.h -index 2f2fcc10..0ee48cd7 100644 ---- a/include/net/if.h -+++ b/include/net/if.h -@@ -125,6 +125,13 @@ struct ifconf { - #define ifc_req ifc_ifcu.ifcu_req - #define _IOT_ifconf _IOT(_IOTS(struct ifconf),1,0,0,0,0) - -+#define __UAPI_DEF_IF_IFCONF 0 -+#define __UAPI_DEF_IF_IFMAP 0 -+#define __UAPI_DEF_IF_IFNAMSIZ 0 -+#define __UAPI_DEF_IF_IFREQ 0 -+#define __UAPI_DEF_IF_NET_DEVICE_FLAGS 0 -+#define __UAPI_DEF_IF_NET_DEVICE_FLAGS_LOWER_UP_DORMANT_ECHO 0 -+ - #endif - - #ifdef __cplusplus -diff --git a/include/netinet/if_ether.h b/include/netinet/if_ether.h -index d9a131aa..c2c6e944 100644 ---- a/include/netinet/if_ether.h -+++ b/include/netinet/if_ether.h -@@ -133,5 +133,6 @@ do { \ - (enaddr)[5] = ((uint8_t *)ipaddr)[3]; \ - } while(0) - -+#define __UAPI_DEF_ETHHDR 0 - - #endif -diff --git a/include/sys/xattr.h b/include/sys/xattr.h -index 6479fcc6..52e3dd89 100644 ---- a/include/sys/xattr.h -+++ b/include/sys/xattr.h -@@ -24,6 +24,8 @@ int removexattr(const char *, const char *); - int lremovexattr(const char *, const char *); - int fremovexattr(int, const char *); - -+#define __UAPI_DEF_XATTR 0 -+ - #ifdef __cplusplus - } - #endif --- -2.11.0 diff --git a/pkgs/os-specific/linux/nftables/default.nix b/pkgs/os-specific/linux/nftables/default.nix index 9d645fb1d848..7edc7b58c6c3 100644 --- a/pkgs/os-specific/linux/nftables/default.nix +++ b/pkgs/os-specific/linux/nftables/default.nix @@ -2,11 +2,11 @@ , flex, bison, libmnl, libnftnl, gmp, readline }: stdenv.mkDerivation rec { - name = "nftables-0.8"; + name = "nftables-0.8.2"; src = fetchurl { url = "http://netfilter.org/projects/nftables/files/${name}.tar.bz2"; - sha256 = "16iq9x0qxikdhp1nan500rk33ycqddl1k57876m4dfv3n7kqhnrz"; + sha256 = "1v370wzh3fzby0cdb9iykkhdj1yjcp5qkp33xyn7w7pii2phlpv7"; }; configureFlags = [ diff --git a/pkgs/os-specific/linux/pagemon/default.nix b/pkgs/os-specific/linux/pagemon/default.nix index aec6e57e9144..99caa813b2ea 100644 --- a/pkgs/os-specific/linux/pagemon/default.nix +++ b/pkgs/os-specific/linux/pagemon/default.nix @@ -2,10 +2,10 @@ stdenv.mkDerivation rec { name = "pagemon-${version}"; - version = "0.01.10"; + version = "0.01.12"; src = fetchFromGitHub { - sha256 = "04dbcr7bzgp4kvhw1rsn084cz4qbfhf7ifyh3ikgdka9w98057h1"; + sha256 = "0bddn22daf33dbghwfjxxgsn4gmr5knr6h9sbqhs7g7p85dla6wa"; rev = "V${version}"; repo = "pagemon"; owner = "ColinIanKing"; diff --git a/pkgs/os-specific/linux/pam_mount/default.nix b/pkgs/os-specific/linux/pam_mount/default.nix index dfcd53ec7786..c38990bdf8fd 100644 --- a/pkgs/os-specific/linux/pam_mount/default.nix +++ b/pkgs/os-specific/linux/pam_mount/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, autoconf, automake, pkgconfig, libtool, pam, libHX, libxml2, pcre, perl, openssl, cryptsetup, utillinux }: stdenv.mkDerivation rec { - name = "pam_mount-2.15"; + name = "pam_mount-2.16"; src = fetchurl { - url = "mirror://sourceforge/pam-mount/pam_mount/2.15/${name}.tar.xz"; - sha256 = "091aq5zyc60wh21m1ryanjwknwxlaj9nvlswn5vjrmcdir5gnkm5"; + url = "mirror://sourceforge/pam-mount/pam_mount/2.16/${name}.tar.xz"; + sha256 = "1rvi4irb7ylsbhvx1cr6islm2xxw1a4b19q6z4a9864ndkm0f0mf"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/os-specific/linux/pipework/default.nix b/pkgs/os-specific/linux/pipework/default.nix index 57ef22083fe4..523f7382a2cf 100644 --- a/pkgs/os-specific/linux/pipework/default.nix +++ b/pkgs/os-specific/linux/pipework/default.nix @@ -4,17 +4,16 @@ stdenv.mkDerivation rec { name = "pipework-${version}"; - version = "2015-07-30"; + version = "2017-08-22"; src = fetchFromGitHub { owner = "jpetazzo"; repo = "pipework"; - rev = "5a46ecb5f8f933fd268ef315f58a1eb1c46bd93d"; - sha256 = "02znyg5ir37s8xqjcqqz6xnwyqxapn7c4scyqkcapxr932hf1frh"; + rev = "ae42f1b5fef82b3bc23fe93c95c345e7af65fef3"; + sha256 = "0c342m0bpq6ranr7dsxk9qi5mg3j5aw9wv85ql8gprdb2pz59qy8"; }; buildInputs = [ makeWrapper ]; installPhase = '' - mkdir -p $out/bin - cp pipework $out/bin + install -D pipework $out/bin/pipework wrapProgram $out/bin/pipework --prefix PATH : \ ${lib.makeBinPath [ bridge-utils iproute lxc openvswitch docker busybox dhcpcd dhcp ]}; ''; diff --git a/pkgs/os-specific/linux/pmount/default.nix b/pkgs/os-specific/linux/pmount/default.nix index c1049d78f42a..63d159e18842 100644 --- a/pkgs/os-specific/linux/pmount/default.nix +++ b/pkgs/os-specific/linux/pmount/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, cryptsetup, dbus, dbus_glib, intltool, ntfs3g, utillinux +{ stdenv, fetchurl, cryptsetup, dbus, dbus-glib, intltool, ntfs3g, utillinux , mediaDir ? "/media/" , lockDir ? "/var/lock/pmount" , whiteList ? "/etc/pmount.allow" diff --git a/pkgs/os-specific/linux/pommed/default.nix b/pkgs/os-specific/linux/pommed/default.nix index 1cdf9044b8ff..3698b2b281f9 100644 --- a/pkgs/os-specific/linux/pommed/default.nix +++ b/pkgs/os-specific/linux/pommed/default.nix @@ -3,7 +3,7 @@ , fetchurl , pciutils , confuse -, dbus, dbus_glib +, dbus, dbus-glib , alsaLib , audiofile , pkgconfig @@ -37,7 +37,7 @@ stdenv.mkDerivation rec { dbus alsaLib audiofile - dbus_glib + dbus-glib pkgconfig gtk2 gettext diff --git a/pkgs/os-specific/linux/prl-tools/default.nix b/pkgs/os-specific/linux/prl-tools/default.nix index 12b361e953ea..b120062295ad 100644 --- a/pkgs/os-specific/linux/prl-tools/default.nix +++ b/pkgs/os-specific/linux/prl-tools/default.nix @@ -1,5 +1,5 @@ { stdenv, lib, requireFile, makeWrapper, substituteAll, p7zip -, gawk, utillinux, xorg, glib, dbus_glib, zlib +, gawk, utillinux, xorg, glib, dbus-glib, zlib , kernel ? null, libsOnly ? false , undmg, fetchurl }: @@ -65,7 +65,7 @@ stdenv.mkDerivation rec { libPath = with xorg; stdenv.lib.makeLibraryPath ([ stdenv.cc.cc libXrandr libXext libX11 libXcomposite libXinerama ] - ++ lib.optionals (!libsOnly) [ libXi glib dbus_glib zlib ]); + ++ lib.optionals (!libsOnly) [ libXi glib dbus-glib zlib ]); installPhase = '' diff --git a/pkgs/os-specific/linux/rdma-core/default.nix b/pkgs/os-specific/linux/rdma-core/default.nix index 77f94e544a07..b25ed85ce4b3 100644 --- a/pkgs/os-specific/linux/rdma-core/default.nix +++ b/pkgs/os-specific/linux/rdma-core/default.nix @@ -3,7 +3,7 @@ } : let - version = "16.1"; + version = "17"; in stdenv.mkDerivation { name = "rdma-core-${version}"; @@ -12,7 +12,7 @@ in stdenv.mkDerivation { owner = "linux-rdma"; repo = "rdma-core"; rev = "v${version}"; - sha256 = "1fixw6hpf732vzlpczx0b2y84jrhgfjr3cljqxky7makzgh2s7ng"; + sha256 = "1xql46favv8i4ni4zqkk9ra2kcqq2dyn7jyi940c869lndmjw9ni"; }; nativeBuildInputs = [ cmake pkgconfig ]; diff --git a/pkgs/os-specific/linux/reptyr/default.nix b/pkgs/os-specific/linux/reptyr/default.nix index 779337e85f86..4b83e478dd1c 100644 --- a/pkgs/os-specific/linux/reptyr/default.nix +++ b/pkgs/os-specific/linux/reptyr/default.nix @@ -13,6 +13,9 @@ stdenv.mkDerivation rec { sed 1i'#include ' -i platform/linux/linux.c ''; + # Needed with GCC 7 + NIX_CFLAGS_COMPILE = "-Wno-error=format-truncation"; + makeFlags = ["PREFIX=$(out)"]; meta = { platforms = [ "i686-linux" "x86_64-linux" ]; diff --git a/pkgs/os-specific/linux/rtl8192eu/default.nix b/pkgs/os-specific/linux/rtl8192eu/default.nix new file mode 100644 index 000000000000..52542aabfded --- /dev/null +++ b/pkgs/os-specific/linux/rtl8192eu/default.nix @@ -0,0 +1,39 @@ +{ stdenv, lib, fetchFromGitHub, kernel }: + +with lib; + +let modDestDir = "$out/lib/modules/${kernel.modDirVersion}/kernel/drivers/net/wireless/realtek/rtl8192eu"; + +in stdenv.mkDerivation rec { + name = "rtl8192eu-${kernel.version}-${version}"; + version = "4.4.1"; + + src = fetchFromGitHub { + owner = "Mange"; + repo = "rtl8192eu-linux-driver"; + rev = "4094004"; + sha256 = "0rgcsp8bd5i5ik9b35qipdhq0xd8pva8kdijixxfaxm4vw6kbrvr"; + }; + + hardeningDisable = [ "pic" ]; + + nativeBuildInputs = kernel.moduleBuildDependencies; + + makeFlags = "KSRC=${kernel.dev}/lib/modules/${kernel.modDirVersion}/build"; + + enableParallelBuilding = true; + + installPhase = '' + mkdir -p ${modDestDir} + find . -name '*.ko' -exec cp --parents {} ${modDestDir} \; + find ${modDestDir} -name '*.ko' -exec xz -f {} \; + ''; + + meta = { + description = "Realtek rtl8192eu driver"; + homepage = https://github.com/Mange/rtl8192eu-linux-driver; + license = stdenv.lib.licenses.gpl2; + platforms = stdenv.lib.platforms.linux; + maintainers = with maintainers; [ troydm ]; + }; +} diff --git a/pkgs/os-specific/linux/rtl8814au/default.nix b/pkgs/os-specific/linux/rtl8814au/default.nix new file mode 100644 index 000000000000..99b42fc74007 --- /dev/null +++ b/pkgs/os-specific/linux/rtl8814au/default.nix @@ -0,0 +1,39 @@ +{ stdenv, fetchFromGitHub, fetchpatch, kernel }: + +stdenv.mkDerivation rec { + name = "rtl8814au-${kernel.version}-${version}"; + version = "4.3.21"; + + src = fetchFromGitHub { + owner = "zebulon2"; + repo = "rtl8814au"; + rev = "a58c56a5a6cb99ffb872f07cb67b68197911854f"; + sha256 = "1ffm67da183nz009gm5v9w1bab081hrm113kk8knl9s5qbqnn13q"; + }; + + buildInputs = kernel.moduleBuildDependencies; + + hardeningDisable = [ "pic" ]; + + NIX_CFLAGS_COMPILE="-Wno-error=incompatible-pointer-types"; + + prePatch = '' + substituteInPlace ./Makefile \ + --replace /lib/modules/ "${kernel.dev}/lib/modules/" \ + --replace '$(shell uname -r)' "${kernel.modDirVersion}" \ + --replace /sbin/depmod \# \ + --replace '$(MODDESTDIR)' "$out/lib/modules/${kernel.modDirVersion}/kernel/net/wireless/" + ''; + + preInstall = '' + mkdir -p "$out/lib/modules/${kernel.modDirVersion}/kernel/net/wireless/" + ''; + + meta = with stdenv.lib; { + description = "Realtek 8814AU USB WiFi driver"; + homepage = https://github.com/zebulon2/rtl8814au; + license = licenses.gpl2; + maintainers = [ maintainers.lassulus ]; + platforms = [ "x86_64-linux" "i686-linux" ]; + }; +} diff --git a/pkgs/os-specific/linux/rtlwifi_new/default.nix b/pkgs/os-specific/linux/rtlwifi_new/default.nix index 4bf3ef82978e..b29b1f639cf7 100644 --- a/pkgs/os-specific/linux/rtlwifi_new/default.nix +++ b/pkgs/os-specific/linux/rtlwifi_new/default.nix @@ -6,13 +6,13 @@ let modDestDir = "$out/lib/modules/${kernel.modDirVersion}/kernel/drivers/net/wi in stdenv.mkDerivation rec { name = "rtlwifi_new-${version}"; - version = "2017-07-18"; + version = "2018-02-17"; src = fetchFromGitHub { owner = "lwfinger"; repo = "rtlwifi_new"; - rev = "a24cb561b4d23187ea103255336daa7ca88791a7"; - sha256 = "1w9rx5wafcp1vc4yh7lj332bv78szl6gmx3ckr8yl6c39alqcv0d"; + rev = "0588ac0cc5f530e7764705416370b70d3c2afedc"; + sha256 = "1vs8rfw19lcs04bapa97zlnl5x0kf02sdw5ik0hdm27wgk0z969m"; }; hardeningDisable = [ "pic" "format" ]; diff --git a/pkgs/os-specific/linux/shadow/default.nix b/pkgs/os-specific/linux/shadow/default.nix index 8875d7ec4b3e..ca15571d1ede 100644 --- a/pkgs/os-specific/linux/shadow/default.nix +++ b/pkgs/os-specific/linux/shadow/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchpatch, fetchFromGitHub, autoreconfHook, libxslt, libxml2 -, docbook_xml_dtd_412, docbook_xsl, gnome_doc_utils, flex, bison +, docbook_xml_dtd_412, docbook_xsl, gnome-doc-utils, flex, bison , pam ? null, glibcCross ? null , buildPlatform, hostPlatform }: @@ -31,7 +31,7 @@ stdenv.mkDerivation rec { buildInputs = stdenv.lib.optional (pam != null && stdenv.isLinux) pam; nativeBuildInputs = [autoreconfHook libxslt libxml2 - docbook_xml_dtd_412 docbook_xsl gnome_doc_utils flex bison + docbook_xml_dtd_412 docbook_xsl gnome-doc-utils flex bison ]; patches = diff --git a/pkgs/os-specific/linux/sysstat/default.nix b/pkgs/os-specific/linux/sysstat/default.nix index adfcc76c31c1..d8e95ff74c43 100644 --- a/pkgs/os-specific/linux/sysstat/default.nix +++ b/pkgs/os-specific/linux/sysstat/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, gettext, bzip2 }: stdenv.mkDerivation rec { - name = "sysstat-11.2.5"; + name = "sysstat-11.7.2"; src = fetchurl { url = "http://perso.orange.fr/sebastien.godard/${name}.tar.xz"; - sha256 = "1r7869pnylamjry5f5l5m1jn68v61js9wdkz8yn37a9a2bcrqp2d"; + sha256 = "169yh9d0ags9xrn5g0k42wd1c895117zbzs257cjxqnb2vk0a38v"; }; buildInputs = [ gettext ]; diff --git a/pkgs/os-specific/linux/systemd/default.nix b/pkgs/os-specific/linux/systemd/default.nix index 9085b1703c0a..383e3c340e64 100644 --- a/pkgs/os-specific/linux/systemd/default.nix +++ b/pkgs/os-specific/linux/systemd/default.nix @@ -8,6 +8,7 @@ , ninja, meson, python3Packages, glibcLocales , patchelf , getent +, hostPlatform }: assert stdenv.isLinux; @@ -71,10 +72,10 @@ in "-Dsystem-gid-max=499" # "-Dtime-epoch=1" - (if stdenv.isArm then "-Dgnu-efi=false" else "-Dgnu-efi=true") - "-Defi-libdir=${gnu-efi}/lib" - "-Defi-includedir=${gnu-efi}/include/efi" - "-Defi-ldsdir=${gnu-efi}/lib" + (if stdenv.isArm || !hostPlatform.isEfi then "-Dgnu-efi=false" else "-Dgnu-efi=true") + "-Defi-libdir=${toString gnu-efi}/lib" + "-Defi-includedir=${toString gnu-efi}/include/efi" + "-Defi-ldsdir=${toString gnu-efi}/lib" "-Dsysvinit-path=" "-Dsysvrcnd-path=" diff --git a/pkgs/os-specific/linux/tp_smapi/default.nix b/pkgs/os-specific/linux/tp_smapi/default.nix index 9c8bf5597514..25eeb889cc28 100644 --- a/pkgs/os-specific/linux/tp_smapi/default.nix +++ b/pkgs/os-specific/linux/tp_smapi/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { name = "tp_smapi-${version}-${kernel.version}"; - version = "unstable-2017-12-04"; + version = "0.43"; src = fetchFromGitHub { owner = "evgeni"; repo = "tp_smapi"; - rev = "76c5120f7be4880cf2c6801f872327e4e70c449f"; - sha256 = "0g8l7rmylspl17qnqpa2h4yj7h3zvy6xlmj5nlnixds9avnbz2vy"; + rev = "tp-smapi/${version}"; + sha256 = "1rjb0njckczc2mj05cagvj0lkyvmyk6bw7wkiinv81lw8m90g77g"; name = "tp-smapi-${version}"; }; diff --git a/pkgs/os-specific/linux/trinity/default.nix b/pkgs/os-specific/linux/trinity/default.nix index 48f6ce4be765..b69bd576ed23 100644 --- a/pkgs/os-specific/linux/trinity/default.nix +++ b/pkgs/os-specific/linux/trinity/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "trinity-${version}"; - version = "1.8"; + version = "1.8-git-2017-02-13"; src = fetchFromGitHub { owner = "kernelslacker"; repo = "trinity"; - rev = "v${version}"; - sha256 = "1ss6ir3ki2hnj4c8068v5bz8bpa43xqg9zlmzhgagi94g9l05qlf"; + rev = "2989c11ce77bc7bec23da62987e2c3a0dd8a83c9"; + sha256 = "19asyrypjhx2cgjdmwfvmgc0hk3xg00zvgkl89vwxngdb40bkwfq"; }; postPatch = '' diff --git a/pkgs/os-specific/linux/udisks-glue/default.nix b/pkgs/os-specific/linux/udisks-glue/default.nix index 8b3ebd46c325..56e237a9fad0 100644 --- a/pkgs/os-specific/linux/udisks-glue/default.nix +++ b/pkgs/os-specific/linux/udisks-glue/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, automake, autoconf, udisks, dbus_glib, glib, confuse }: +{ stdenv, fetchurl, pkgconfig, automake, autoconf, udisks1, dbus-glib, glib, confuse }: stdenv.mkDerivation { name = "udisks-glue-1.3.5"; @@ -8,8 +8,8 @@ stdenv.mkDerivation { sha256 = "317d25bf249278dc8f6a5dcf18f760512427c772b9afe3cfe34e6e1baa258176"; }; - nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ automake autoconf udisks dbus_glib glib confuse ]; + nativeBuildInputs = [ pkgconfig automake autoconf ]; + buildInputs = [ udisks1 dbus-glib glib confuse ]; preConfigure = "sh autogen.sh"; diff --git a/pkgs/os-specific/linux/udisks/1-default.nix b/pkgs/os-specific/linux/udisks/1-default.nix index 98cb616e2d5c..aeb9deac89d2 100644 --- a/pkgs/os-specific/linux/udisks/1-default.nix +++ b/pkgs/os-specific/linux/udisks/1-default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, sg3_utils, udev, glib, dbus, dbus_glib +{ stdenv, fetchurl, pkgconfig, sg3_utils, udev, glib, dbus, dbus-glib , polkit, parted, lvm2, libatasmart, intltool, libuuid, mdadm , libxslt, docbook_xsl, utillinux, libgudev }: @@ -27,7 +27,7 @@ stdenv.mkDerivation rec { ''; buildInputs = - [ sg3_utils udev glib dbus dbus_glib polkit parted libgudev + [ sg3_utils udev glib dbus dbus-glib polkit parted libgudev lvm2 libatasmart intltool libuuid libxslt docbook_xsl ]; diff --git a/pkgs/os-specific/linux/udisks/2-default.nix b/pkgs/os-specific/linux/udisks/2-default.nix index a265395f96e5..725b1cd25643 100644 --- a/pkgs/os-specific/linux/udisks/2-default.nix +++ b/pkgs/os-specific/linux/udisks/2-default.nix @@ -1,6 +1,7 @@ { stdenv, fetchurl, pkgconfig, intltool, gnused , expat, acl, systemd, glib, libatasmart, polkit , libxslt, docbook_xsl, utillinux, mdadm, libgudev +, gobjectIntrospection }: stdenv.mkDerivation rec { @@ -11,7 +12,7 @@ stdenv.mkDerivation rec { sha256 = "0spl155k0g2l2hvqf8xyjv08i68gfyhzpjva6cwlzxx0bz4gbify"; }; - outputs = [ "out" "man" ]; + outputs = [ "out" "man" "dev" ]; patches = [ ./force-path.patch ]; @@ -28,7 +29,7 @@ stdenv.mkDerivation rec { --replace " sed " " ${gnused}/bin/sed " ''; - nativeBuildInputs = [ pkgconfig intltool ]; + nativeBuildInputs = [ pkgconfig intltool gobjectIntrospection ]; buildInputs = [ libxslt docbook_xsl libgudev expat acl systemd glib libatasmart polkit ]; @@ -38,6 +39,11 @@ stdenv.mkDerivation rec { "--with-udevdir=$(out)/lib/udev" ]; + makeFlags = [ + "INTROSPECTION_GIRDIR=$(dev)/share/gir-1.0" + "INTROSPECTION_TYPELIBDIR=$(out)/lib/girepository-1.0" + ]; + meta = { homepage = http://www.freedesktop.org/wiki/Software/udisks; description = "A daemon and command-line utility for querying and manipulating storage devices"; diff --git a/pkgs/os-specific/linux/upower/default.nix b/pkgs/os-specific/linux/upower/default.nix index c46ed2d0c015..713ef974f9fb 100644 --- a/pkgs/os-specific/linux/upower/default.nix +++ b/pkgs/os-specific/linux/upower/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, glib, dbus_glib +{ stdenv, fetchurl, pkgconfig, glib, dbus-glib , intltool, libxslt, docbook_xsl, udev, libgudev, libusb1 , useSystemd ? true, systemd, gobjectIntrospection }: @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { }; buildInputs = - [ dbus_glib intltool libxslt docbook_xsl udev libgudev libusb1 gobjectIntrospection ] + [ dbus-glib intltool libxslt docbook_xsl udev libgudev libusb1 gobjectIntrospection ] ++ stdenv.lib.optional useSystemd systemd; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/os-specific/linux/usbguard/daemon_read_only_config.patch b/pkgs/os-specific/linux/usbguard/daemon_read_only_config.patch deleted file mode 100644 index eb4d5df698ac..000000000000 --- a/pkgs/os-specific/linux/usbguard/daemon_read_only_config.patch +++ /dev/null @@ -1,13 +0,0 @@ -diff --git a/src/Library/ConfigFilePrivate.cpp b/src/Library/ConfigFilePrivate.cpp -index 8aefa65..40914f7 100644 ---- a/src/Library/ConfigFilePrivate.cpp -+++ b/src/Library/ConfigFilePrivate.cpp -@@ -51,7 +51,7 @@ namespace usbguard - - void ConfigFilePrivate::open(const std::string& path) - { -- _stream.open(path, std::ios::in|std::ios::out); -+ _stream.open(path, std::ios::in); - if (!_stream.is_open()) { - throw std::runtime_error("Can't open " + path); - } diff --git a/pkgs/os-specific/linux/usbguard/default.nix b/pkgs/os-specific/linux/usbguard/default.nix index b88d96e02a44..2ca825a27d71 100644 --- a/pkgs/os-specific/linux/usbguard/default.nix +++ b/pkgs/os-specific/linux/usbguard/default.nix @@ -1,7 +1,8 @@ { stdenv, fetchurl, lib, - libxslt, pandoc, pkgconfig, - dbus_glib, libcap_ng, libqb, libseccomp, polkit, protobuf, qtbase, qttools, qtsvg, + libxslt, pandoc, asciidoctor, pkgconfig, + dbus-glib, libcap_ng, libqb, libseccomp, polkit, protobuf, qtbase, qttools, qtsvg, + audit, libgcrypt ? null, libsodium ? null }: @@ -11,34 +12,31 @@ with stdenv.lib; assert libgcrypt != null -> libsodium == null; stdenv.mkDerivation rec { - version = "0.7.0"; + version = "0.7.2"; name = "usbguard-${version}"; - repo = "https://github.com/dkopecek/usbguard"; + repo = "https://github.com/USBGuard/usbguard"; src = fetchurl { url = "${repo}/releases/download/${name}/${name}.tar.gz"; - sha256 = "1e1485a2b47ba3bde9de2851b371d2552a807047a21e0b81553cf80d7f722709"; + sha256 = "5bd3e5219c590c3ae27b21315bd10b60e823cef64e5deff3305ff5b4087fc2d6"; }; - patches = [ - ./daemon_read_only_config.patch - ./documentation.patch - ]; - nativeBuildInputs = [ libxslt + asciidoctor pandoc # for rendering documentation pkgconfig ]; buildInputs = [ - dbus_glib + dbus-glib libcap_ng libqb libseccomp polkit protobuf + audit qtbase qtsvg @@ -61,7 +59,7 @@ stdenv.mkDerivation rec { meta = { description = "The USBGuard software framework helps to protect your computer against BadUSB."; - homepage = "https://dkopecek.github.io/usbguard/"; + homepage = "https://usbguard.github.io/"; license = licenses.gpl2; maintainers = [ maintainers.tnias ]; }; diff --git a/pkgs/os-specific/linux/usbguard/documentation.patch b/pkgs/os-specific/linux/usbguard/documentation.patch deleted file mode 100644 index 89de627131f5..000000000000 --- a/pkgs/os-specific/linux/usbguard/documentation.patch +++ /dev/null @@ -1,32 +0,0 @@ -diff --git a/doc/usbguard-daemon.conf.5.md b/doc/usbguard-daemon.conf.5.md -index ea86ad1..63aec70 100644 ---- a/doc/usbguard-daemon.conf.5.md -+++ b/doc/usbguard-daemon.conf.5.md -@@ -30,21 +30,21 @@ The **usbguard-daemon.conf** file is loaded by the USBGuard daemon after it pars - **RestoreControllerDeviceState**=<*boolean*> - : The USBGuard daemon modifies some attributes of controller devices like the default authorization state of new child device instances. Using this setting, you can control whether the daemon will try to restore the attribute values to the state before modification on shutdown. - -+**DeviceManagerBackend**=<*backend*> -+: Which device manager backend implementation to use. Backend should be one of `uevent` (default) or `dummy`. -+ - **IPCAllowedUsers**=<*username*> [<*username*> ...] - : A space delimited list of usernames that the daemon will accept IPC connections from. - - **IPCAllowedGroups**=<*groupname*> [<*groupname*> ...] - : A space delimited list of groupnames that the daemon will accept IPC connections from. - --**IPCAccessControlFiles**=<*path*> --: Path to a directory holding the IPC access control files. -- --**DeviceManagerBackend**=<*backend*> --: Which device manager backend implementation to use. Backend should be one of `uevent` (default) or `dummy`. -- - **IPCAccessControlFiles**=<*path*> - : The files at this location will be interpreted by the daemon as IPC access control definition files. See the **IPC ACCESS CONTROL** section for more details. - -+**DeviceRulesWithPort**=<*boolean*> -+: Generate device specific rules including the "via-port" attribute. -+ - **AuditFilePath**=<*filepath*> - : USBGuard audit events log file path. - diff --git a/pkgs/os-specific/linux/wireguard/default.nix b/pkgs/os-specific/linux/wireguard/default.nix index c5461c06e830..0029353ba20c 100644 --- a/pkgs/os-specific/linux/wireguard/default.nix +++ b/pkgs/os-specific/linux/wireguard/default.nix @@ -6,11 +6,11 @@ assert kernel != null -> stdenv.lib.versionAtLeast kernel.version "3.10"; let name = "wireguard-${version}"; - version = "0.0.20180202"; + version = "0.0.20180218"; src = fetchurl { url = "https://git.zx2c4.com/WireGuard/snapshot/WireGuard-${version}.tar.xz"; - sha256 = "ee3415b482265ad9e8721aa746aaffdf311058a2d1a4d80e7b6d11bbbf71c722"; + sha256 = "4ac4c4e4ad4dc2cf9dcb831b0cf347567ccea675ca524528cf5a4d9dccb2fe52"; }; meta = with stdenv.lib; { diff --git a/pkgs/servers/amqp/rabbitmq-server/default.nix b/pkgs/servers/amqp/rabbitmq-server/default.nix index 889ec4d3745f..3d4a8902c918 100644 --- a/pkgs/servers/amqp/rabbitmq-server/default.nix +++ b/pkgs/servers/amqp/rabbitmq-server/default.nix @@ -1,40 +1,73 @@ -{ stdenv, fetchurl, erlang, python, libxml2, libxslt, xmlto +{ stdenv, fetchurl, runCommand +, erlang, python, libxml2, libxslt, xmlto , docbook_xml_dtd_45, docbook_xsl, zip, unzip, rsync , AppKit, Carbon, Cocoa }: -stdenv.mkDerivation rec { - name = "rabbitmq-server-${version}"; +let + # we only need that one glibc binary (28k instead of 2.7M) + getconf = runCommand "getconf" {} '' + install -D ${stdenv.lib.getBin stdenv.cc.libc}/bin/getconf $out/bin/getconf + ''; - version = "3.6.10"; +in stdenv.mkDerivation rec { + name = "rabbitmq-server-${version}"; + version = "3.6.15"; src = fetchurl { url = "https://www.rabbitmq.com/releases/rabbitmq-server/v${version}/${name}.tar.xz"; - sha256 = "0k1rhg1a51201b1hp6vaf4fk48hqz7m9hw55b8xnnyz2ld88jiqg"; + sha256 = "1zdmil657mhjmd20jv47s5dfpj2liqwvyg0zv2ky3akanfpgj98y"; }; buildInputs = [ erlang python libxml2 libxslt xmlto docbook_xml_dtd_45 docbook_xsl zip unzip rsync ] ++ stdenv.lib.optionals stdenv.isDarwin [ AppKit Carbon Cocoa ]; - preBuild = - '' - # Fix the "/usr/bin/env" in "calculate-relative". - patchShebangs . - ''; + outputs = [ "out" "man" "doc" ]; + + postPatch = with stdenv.lib; '' + # patch the path to getconf + substituteInPlace deps/rabbit_common/src/vm_memory_monitor.erl \ + --replace "getconf PAGESIZE" "${getconf}/bin/getconf PAGESIZE" + ''; + + preBuild = '' + # Fix the "/usr/bin/env" in "calculate-relative". + patchShebangs . + ''; installFlags = "PREFIX=$(out) RMQ_ERLAPP_DIR=$(out)"; installTargets = "install install-man"; - postInstall = - '' - echo 'PATH=${erlang}/bin:''${PATH:+:}$PATH' >> $out/sbin/rabbitmq-env + postInstall = '' + echo 'PATH=${erlang}/bin:''${PATH:+:}$PATH' >> $out/sbin/rabbitmq-env + + # we know exactly where rabbitmq is gonna be, + # so we patch that into the env-script + substituteInPlace $out/sbin/rabbitmq-env \ + --replace 'RABBITMQ_SCRIPTS_DIR=`dirname $SCRIPT_PATH`' \ + "RABBITMQ_SCRIPTS_DIR=$out/sbin" + + # there’s a few stray files that belong into share + mkdir -p $doc/share/doc/rabbitmq-server + mv $out/LICENSE* $doc/share/doc/rabbitmq-server + + # and an unecessarily copied INSTALL file + rm $out/INSTALL + + # patched into a source file above; + # needs to be explicitely passed to not be stripped by fixup + mkdir -p $out/nix-support + echo "${getconf}" > $out/nix-support/dont-strip-getconf + ''; meta = { homepage = http://www.rabbitmq.com/; description = "An implementation of the AMQP messaging protocol"; + license = stdenv.lib.licenses.mpl11; platforms = stdenv.lib.platforms.unix; + maintainers = with stdenv.lib.maintainers; [ Profpatsch ]; }; } diff --git a/pkgs/servers/caddy/default.nix b/pkgs/servers/caddy/default.nix index c24780095dbe..ad8aeadeff06 100644 --- a/pkgs/servers/caddy/default.nix +++ b/pkgs/servers/caddy/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { name = "caddy-${version}"; - version = "0.10.10"; + version = "0.10.11"; goPackagePath = "github.com/mholt/caddy"; @@ -12,7 +12,7 @@ buildGoPackage rec { owner = "mholt"; repo = "caddy"; rev = "v${version}"; - sha256 = "1x7f1yz5vnsy9n50ak0vjrm4w8fqc1qvhv8fmqnsc8cgbp7f3p8w"; + sha256 = "04ls0s79dsyxnrpra55qvl0dk9nyvps59l034326r3bzk4jhb3q6"; }; buildFlagsArray = '' diff --git a/pkgs/servers/computing/slurm/default.nix b/pkgs/servers/computing/slurm/default.nix index 59d627901131..fe028cf812e7 100644 --- a/pkgs/servers/computing/slurm/default.nix +++ b/pkgs/servers/computing/slurm/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { name = "slurm-${version}"; - version = "17.02.9"; + version = "17.11.3"; src = fetchurl { url = "https://download.schedmd.com/slurm/${name}.tar.bz2"; - sha256 = "0w8v7fzbn7b3f9kg6lcj2jpkzln3vcv9s2cz37xbdifz0m2p1x7s"; + sha256 = "1x3i6z03d9m46fvj1cslrapm1drvgyqch9pn4xf23kvbz4gkhaps"; }; outputs = [ "out" "dev" ]; diff --git a/pkgs/servers/corosync/default.nix b/pkgs/servers/corosync/default.nix index dc2f0f6fd709..145052ff8c3a 100644 --- a/pkgs/servers/corosync/default.nix +++ b/pkgs/servers/corosync/default.nix @@ -9,11 +9,11 @@ with stdenv.lib; stdenv.mkDerivation rec { - name = "corosync-2.4.2"; + name = "corosync-2.4.3"; src = fetchurl { url = "http://build.clusterlabs.org/corosync/releases/${name}.tar.gz"; - sha256 = "1aab380mv4ivy5icmwvk7941jbs6ikm21p5ijk7brr4z608k0vpj"; + sha256 = "15y5la04qn2lh1gabyifygzpa4dx3ndk5yhmaf7azxyjx0if9rxi"; }; nativeBuildInputs = [ makeWrapper pkgconfig ]; diff --git a/pkgs/servers/coturn/default.nix b/pkgs/servers/coturn/default.nix index 8df584435a2f..f83ef4cef388 100644 --- a/pkgs/servers/coturn/default.nix +++ b/pkgs/servers/coturn/default.nix @@ -4,13 +4,13 @@ let inherit (stdenv.lib) optional; in stdenv.mkDerivation rec { name = "coturn-${version}"; - version = "4.5.0.6"; + version = "4.5.0.7"; src = fetchFromGitHub { owner = "coturn"; repo = "coturn"; rev = "${version}"; - sha256 = "084c3zgwmmz4s6211i5jbkzsn13703lsg7vhc2cpacazq4sgsrhb"; + sha256 = "1781fx8lqgc54j973xzgq9d7k3g2j03va82jb4217gd3a93pa65l"; }; buildInputs = [ openssl libevent ]; diff --git a/pkgs/servers/dante/default.nix b/pkgs/servers/dante/default.nix index 044d4fa50ab2..ee139ea2652c 100644 --- a/pkgs/servers/dante/default.nix +++ b/pkgs/servers/dante/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation (rec { name = "dante-${version}"; - version = "1.4.1"; + version = "1.4.2"; src = fetchurl { url = "https://www.inet.no/dante/files/${name}.tar.gz"; - sha256 = "0lsg3hk8zd2h9f08s13bn4l4pvyyzkj4gr4ppwa7vj7gdyyk5lmn"; + sha256 = "1bfafnm445afrmyxvvcl8ckq0p59yzykmr3y8qvryzrscd85g8ms"; }; configureFlags = [ diff --git a/pkgs/servers/dico/default.nix b/pkgs/servers/dico/default.nix index c530929f79e4..8958daa1a70a 100644 --- a/pkgs/servers/dico/default.nix +++ b/pkgs/servers/dico/default.nix @@ -2,11 +2,11 @@ , guile, python, pcre, libffi, groff }: stdenv.mkDerivation rec { - name = "dico-2.4"; + name = "dico-2.5"; src = fetchurl { url = "mirror://gnu/dico/${name}.tar.xz"; - sha256 = "13m7vahfbdj7hb38bjgd4cmfswavvxrcpppj9n4m4rar3wyzg52g"; + sha256 = "0szm3z4xvq0pjj8kxl4paq63byamf281kzn1la0cdm5ngavypxxq"; }; hardeningDisable = [ "format" ]; diff --git a/pkgs/servers/diod/default.nix b/pkgs/servers/diod/default.nix index dcda4e8c0bb4..a233b6ba4cf8 100644 --- a/pkgs/servers/diod/default.nix +++ b/pkgs/servers/diod/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "diod-${version}"; - version = "1.0.23"; + version = "1.0.24"; src = fetchurl { url = "https://github.com/chaos/diod/releases/download/${version}/${name}.tar.gz"; - sha256 = "002vxc9fwdwshda4jydxagr63xd6nnhbc6fh73974gi2pvp6gid3"; + sha256 = "17wckwfsqj61yixz53nwkc35z66arb1x3napahpi64m7q68jn7gl"; }; buildInputs = [ munge lua libcap perl ncurses ]; diff --git a/pkgs/servers/dns/bind/darwin-openssl-linking-fix.patch b/pkgs/servers/dns/bind/darwin-openssl-linking-fix.patch index b7e7bfc73bf9..8276c28c3f4b 100644 --- a/pkgs/servers/dns/bind/darwin-openssl-linking-fix.patch +++ b/pkgs/servers/dns/bind/darwin-openssl-linking-fix.patch @@ -1,8 +1,8 @@ diff --git a/configure b/configure -index 6779cc3..4275520 100755 +index b9ad66b..a2a7382 100755 --- a/configure +++ b/configure -@@ -15707,21 +15707,6 @@ $as_echo "not found" >&6; } +@@ -16033,21 +16033,6 @@ $as_echo "not found" >&6; } *-hp-hpux*) DST_OPENSSL_LIBS="-L$use_openssl/lib -Wl,+b: -lcrypto" ;; diff --git a/pkgs/servers/dns/bind/default.nix b/pkgs/servers/dns/bind/default.nix index ea4d4f387d8f..c0176db15769 100644 --- a/pkgs/servers/dns/bind/default.nix +++ b/pkgs/servers/dns/bind/default.nix @@ -3,14 +3,14 @@ assert enableSeccomp -> libseccomp != null; -let version = "9.11.2-P1"; in +let version = "9.12.0"; in stdenv.mkDerivation rec { name = "bind-${version}"; src = fetchurl { url = "http://ftp.isc.org/isc/bind9/${version}/${name}.tar.gz"; - sha256 = "04hjvwvs7ssgj69lqparx0wj0w3xkc0x8y2iv62kzjighd41bhyf"; + sha256 = "10iwkghl5g50b7wc17bsb9wa0dh2gd57bjlk6ynixhywz6dhx1r9"; }; outputs = [ "out" "lib" "dev" "man" "dnsutils" "host" ]; diff --git a/pkgs/servers/dns/bind/dont-keep-configure-flags.patch b/pkgs/servers/dns/bind/dont-keep-configure-flags.patch index 91cae62b1715..5a934056d13d 100644 --- a/pkgs/servers/dns/bind/dont-keep-configure-flags.patch +++ b/pkgs/servers/dns/bind/dont-keep-configure-flags.patch @@ -1,40 +1,41 @@ diff --git a/bin/named/include/named/globals.h b/bin/named/include/named/globals.h -index f354cfb..2aa0cc5 100644 +index 388dc97..3c6135c 100644 --- a/bin/named/include/named/globals.h +++ b/bin/named/include/named/globals.h -@@ -71,7 +71,9 @@ EXTERN const char * ns_g_version INIT(VERSION); - EXTERN const char * ns_g_product INIT(PRODUCT); - EXTERN const char * ns_g_description INIT(DESCRIPTION); - EXTERN const char * ns_g_srcid INIT(SRCID); +@@ -65,7 +65,9 @@ EXTERN const char * named_g_version INIT(VERSION); + EXTERN const char * named_g_product INIT(PRODUCT); + EXTERN const char * named_g_description INIT(DESCRIPTION); + EXTERN const char * named_g_srcid INIT(SRCID); +#if 0 - EXTERN const char * ns_g_configargs INIT(CONFIGARGS); + EXTERN const char * named_g_configargs INIT(CONFIGARGS); +#endif - EXTERN const char * ns_g_builder INIT(BUILDER); - EXTERN in_port_t ns_g_port INIT(0); - EXTERN isc_dscp_t ns_g_dscp INIT(-1); + EXTERN const char * named_g_builder INIT(BUILDER); + EXTERN in_port_t named_g_port INIT(0); + EXTERN isc_dscp_t named_g_dscp INIT(-1); diff --git a/bin/named/main.c b/bin/named/main.c -index 556db54..edab41d 100644 +index 4fb0566..60d56cd 100644 --- a/bin/named/main.c +++ b/bin/named/main.c -@@ -636,8 +636,10 @@ parse_command_line(int argc, char *argv[]) { - (*ns_g_description != '\0') ? " " : "", - ns_g_description, ns_g_srcid); - printf("running on %s\n", ns_os_uname()); -+#if 0 +@@ -672,8 +672,10 @@ parse_command_line(int argc, char *argv[]) { + (*named_g_description != '\0') ? " " : "", + named_g_description, named_g_srcid); + printf("running on %s\n", named_os_uname()); ++ #if 0 printf("built by %s with %s\n", - ns_g_builder, ns_g_configargs); -+#endif + named_g_builder, named_g_configargs); ++ #endif #ifdef __clang__ printf("compiled by CLANG %s\n", __VERSION__); #else -@@ -998,8 +1000,10 @@ setup(void) { - isc_log_write(ns_g_lctx, NS_LOGCATEGORY_GENERAL, NS_LOGMODULE_MAIN, - ISC_LOG_NOTICE, "running on %s", ns_os_uname()); +@@ -1075,9 +1077,11 @@ setup(void) { + NAMED_LOGMODULE_MAIN, ISC_LOG_NOTICE, + "running on %s", named_os_uname()); +#if 0 - isc_log_write(ns_g_lctx, NS_LOGCATEGORY_GENERAL, NS_LOGMODULE_MAIN, - ISC_LOG_NOTICE, "built with %s", ns_g_configargs); + isc_log_write(named_g_lctx, NAMED_LOGCATEGORY_GENERAL, + NAMED_LOGMODULE_MAIN, ISC_LOG_NOTICE, + "built with %s", named_g_configargs); +#endif - isc_log_write(ns_g_lctx, NS_LOGCATEGORY_GENERAL, NS_LOGMODULE_MAIN, - ISC_LOG_NOTICE, + isc_log_write(named_g_lctx, NAMED_LOGCATEGORY_GENERAL, + NAMED_LOGMODULE_MAIN, ISC_LOG_NOTICE, diff --git a/pkgs/servers/dns/knot-resolver/default.nix b/pkgs/servers/dns/knot-resolver/default.nix index 56b4a1552fe6..a222805fc459 100644 --- a/pkgs/servers/dns/knot-resolver/default.nix +++ b/pkgs/servers/dns/knot-resolver/default.nix @@ -12,11 +12,11 @@ inherit (stdenv.lib) optional optionals optionalString concatStringsSep; unwrapped = stdenv.mkDerivation rec { name = "knot-resolver-${version}"; - version = "2.1.0"; + version = "2.1.1"; src = fetchurl { url = "http://secure.nic.cz/files/knot-resolver/${name}.tar.xz"; - sha256 = "0e90ac37965839705bc2154cb07587cb31dd5816e37a14f3552d65676638fc6a"; + sha256 = "0b9caee03d7cd30e1dc8fa0ce5fafade31fc1785314986bbf77cad446522a1b3"; }; outputs = [ "out" "dev" ]; diff --git a/pkgs/servers/dns/nsd/default.nix b/pkgs/servers/dns/nsd/default.nix index d14233016d86..b4bd6175f3e7 100644 --- a/pkgs/servers/dns/nsd/default.nix +++ b/pkgs/servers/dns/nsd/default.nix @@ -15,11 +15,11 @@ }: stdenv.mkDerivation rec { - name = "nsd-4.1.19"; + name = "nsd-4.1.20"; src = fetchurl { url = "http://www.nlnetlabs.nl/downloads/nsd/${name}.tar.gz"; - sha256 = "1i82kvgxv4vz79dqd0ckz6syr1fdf6q60r4b926qh5klnnwjqy5h"; + sha256 = "04zph9zli3a0zx1sfphwbxx6f8whdxcjai6w0k7a565vgcfzd5wa"; }; prePatch = '' diff --git a/pkgs/servers/emby/default.nix b/pkgs/servers/emby/default.nix index 05d53d444627..12c475bfc280 100644 --- a/pkgs/servers/emby/default.nix +++ b/pkgs/servers/emby/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "emby-${version}"; - version = "3.2.60.0"; + version = "3.2.70.0"; src = fetchurl { url = "https://github.com/MediaBrowser/Emby/releases/download/${version}/Emby.Mono.zip"; - sha256 = "0yrbwq5dzzq5047vdpar4vkwzcgd9dj2v9basaw413hzncf2q8gj"; + sha256 = "051mbzh1igcbda43n14aijbvhhh98rqw8i13f06xqsm67afrjjcv"; }; buildInputs = with pkgs; [ diff --git a/pkgs/servers/etcd/default.nix b/pkgs/servers/etcd/default.nix index 15ea30aa16cb..29cb8c2223c0 100644 --- a/pkgs/servers/etcd/default.nix +++ b/pkgs/servers/etcd/default.nix @@ -4,7 +4,7 @@ with lib; buildGoPackage rec { name = "etcd-${version}"; - version = "3.1.6"; # After updating check that nixos tests pass + version = "3.3.1"; # After updating check that nixos tests pass rev = "v${version}"; goPackagePath = "github.com/coreos/etcd"; @@ -13,7 +13,7 @@ buildGoPackage rec { inherit rev; owner = "coreos"; repo = "etcd"; - sha256 = "1qgi6zxnijzr644w2da2gbn3gw2qwk6a3z3qmdln0r2rjnm70sx0"; + sha256 = "11gzmi05y4kpnzgqc737l0wk5svxai4z17nl92jazqga6zhyavyl"; }; subPackages = [ diff --git a/pkgs/servers/fleet/default.nix b/pkgs/servers/fleet/default.nix index 3f600b5a1221..98daab253b3c 100644 --- a/pkgs/servers/fleet/default.nix +++ b/pkgs/servers/fleet/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "fleet-${version}"; - version = "0.11.8"; + version = "1.0.0"; src = fetchFromGitHub { owner = "coreos"; repo = "fleet"; rev = "v${version}"; - sha256 = "13kwaa4hkiic602wnvnk13pflrxqhk2vxwpk1bn52ilwxkjyvkig"; + sha256 = "0j48ajz19aqfzv9iyznnn39aw51y1nqcl270grmvi5cbqycmrfm0"; }; buildInputs = [ go ]; diff --git a/pkgs/servers/ftp/pure-ftpd/default.nix b/pkgs/servers/ftp/pure-ftpd/default.nix index 4e39b78b89ec..3728ee6c2a8f 100644 --- a/pkgs/servers/ftp/pure-ftpd/default.nix +++ b/pkgs/servers/ftp/pure-ftpd/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, openssl }: stdenv.mkDerivation rec { - name = "pure-ftpd-1.0.46"; + name = "pure-ftpd-1.0.47"; src = fetchurl { url = "https://download.pureftpd.org/pub/pure-ftpd/releases/${name}.tar.gz"; - sha256 = "0p0arcaz63fbb03fkavbc8z6m1f90p5vbnxb8mqlvpma6mrq0286"; + sha256 = "1b97ixva8m10vln8xrfwwwzi344bkgxqji26d0nrm1yzylbc6h27"; }; buildInputs = [ openssl ]; diff --git a/pkgs/servers/gpsd/default.nix b/pkgs/servers/gpsd/default.nix index 7670c89f0c6a..b01e94187898 100644 --- a/pkgs/servers/gpsd/default.nix +++ b/pkgs/servers/gpsd/default.nix @@ -1,4 +1,4 @@ -{ fetchurl, stdenv, scons, pkgconfig, dbus, dbus_glib +{ fetchurl, stdenv, scons, pkgconfig, dbus, dbus-glib , ncurses, libX11, libXt, libXpm, libXaw, libXext , libusb1, docbook_xml_dtd_412, docbook_xsl, bc , libxslt, xmlto, gpsdUser ? "gpsd", gpsdGroup ? "dialout" @@ -22,7 +22,7 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - python2Packages.python dbus dbus_glib ncurses libX11 libXt libXpm libXaw libXext + python2Packages.python dbus dbus-glib ncurses libX11 libXt libXpm libXaw libXext libxslt libusb1 ]; diff --git a/pkgs/servers/home-assistant/component-packages.nix b/pkgs/servers/home-assistant/component-packages.nix index 43b2418db771..2b031f33555d 100644 --- a/pkgs/servers/home-assistant/component-packages.nix +++ b/pkgs/servers/home-assistant/component-packages.nix @@ -4,435 +4,435 @@ { version = "0.63.3"; components = { - "nuimo_controller" = ps: with ps; [ ]; - "bbb_gpio" = ps: with ps; [ ]; - "doorbird" = ps: with ps; [ ]; - "isy994" = ps: with ps; [ ]; - "notify.html5" = ps: with ps; [ pyjwt ]; - "sensor.mvglive" = ps: with ps; [ ]; - "arduino" = ps: with ps; [ ]; - "xiaomi_aqara" = ps: with ps; [ ]; - "rpi_gpio" = ps: with ps; [ ]; - "remember_the_milk" = ps: with ps; [ httplib2 ]; - "media_player.sonos" = ps: with ps; [ ]; - "sensor.travisci" = ps: with ps; [ ]; - "notify.twitter" = ps: with ps; [ ]; - "notify.yessssms" = ps: with ps; [ ]; "abode" = ps: with ps; [ ]; - "device_tracker.automatic" = ps: with ps; [ ]; - "sensor.dnsip" = ps: with ps; [ aiodns ]; - "emulated_hue" = ps: with ps; [ aiohttp-cors ]; - "http" = ps: with ps; [ aiohttp-cors ]; - "sensor.imap" = ps: with ps; [ aioimaplib ]; - "light.lifx" = ps: with ps; [ ]; - "scene.hunterdouglas_powerview" = ps: with ps; [ ]; + "ads" = ps: with ps; [ ]; + "alarm_control_panel.alarmdotcom" = ps: with ps; [ ]; + "alarm_control_panel.concord232" = ps: with ps; [ ]; + "alarm_control_panel.egardia" = ps: with ps; [ ]; + "alarm_control_panel.ialarm" = ps: with ps; [ ]; + "alarm_control_panel.nx584" = ps: with ps; [ ]; + "alarm_control_panel.simplisafe" = ps: with ps; [ ]; + "alarm_control_panel.totalconnect" = ps: with ps; [ ]; "alarmdecoder" = ps: with ps; [ ]; - "sensor.alpha_vantage" = ps: with ps; [ ]; "amcrest" = ps: with ps; [ ]; - "media_player.anthemav" = ps: with ps; [ ]; + "android_ip_webcam" = ps: with ps; [ ]; "apcupsd" = ps: with ps; [ ]; - "notify.apns" = ps: with ps; [ ]; + "apple_tv" = ps: with ps; [ ]; + "arduino" = ps: with ps; [ ]; + "arlo" = ps: with ps; [ ]; "asterisk_mbox" = ps: with ps; [ ]; - "light.avion" = ps: with ps; [ ]; "axis" = ps: with ps; [ ]; - "tts.baidu" = ps: with ps; [ ]; - "sensor.modem_callerid" = ps: with ps; [ ]; - "sensor.linux_battery" = ps: with ps; [ batinfo ]; - "sensor.eddystone_temperature" = ps: with ps; [ ]; - "device_tracker.linksys_ap" = ps: with ps; [ beautifulsoup4 ]; - "sensor.geizhals" = ps: with ps; [ beautifulsoup4 ]; - "sensor.scrape" = ps: with ps; [ beautifulsoup4 ]; - "sensor.sytadin" = ps: with ps; [ beautifulsoup4 ]; - "zha" = ps: with ps; [ ]; + "bbb_gpio" = ps: with ps; [ ]; + "binary_sensor.concord232" = ps: with ps; [ ]; + "binary_sensor.flic" = ps: with ps; [ ]; + "binary_sensor.hikvision" = ps: with ps; [ ]; + "binary_sensor.iss" = ps: with ps; [ ]; + "binary_sensor.nx584" = ps: with ps; [ ]; + "binary_sensor.tapsaff" = ps: with ps; [ ]; + "binary_sensor.trend" = ps: with ps; [ numpy ]; + "binary_sensor.workday" = ps: with ps; [ ]; "blink" = ps: with ps; [ ]; + "calendar.caldav" = ps: with ps; [ ]; + "calendar.todoist" = ps: with ps; [ todoist ]; + "camera.foscam" = ps: with ps; [ ]; + "camera.onvif" = ps: with ps; [ ]; + "camera.synology" = ps: with ps; [ ]; + "camera.uvc" = ps: with ps; [ ]; + "camera.xeoma" = ps: with ps; [ ]; + "canary" = ps: with ps; [ ]; + "climate.daikin" = ps: with ps; [ ]; + "climate.econet" = ps: with ps; [ ]; + "climate.ephember" = ps: with ps; [ ]; + "climate.eq3btsmart" = ps: with ps; [ ]; + "climate.flexit" = ps: with ps; [ ]; + "climate.heatmiser" = ps: with ps; [ ]; + "climate.honeywell" = ps: with ps; [ ]; + "climate.oem" = ps: with ps; [ ]; + "climate.proliphix" = ps: with ps; [ ]; + "climate.radiotherm" = ps: with ps; [ ]; + "climate.sensibo" = ps: with ps; [ ]; + "climate.touchline" = ps: with ps; [ ]; + "climate.venstar" = ps: with ps; [ ]; + "cloud" = ps: with ps; [ ]; + "coinbase" = ps: with ps; [ ]; + "comfoconnect" = ps: with ps; [ ]; + "conversation" = ps: with ps; [ ]; + "cover.myq" = ps: with ps; [ ]; + "daikin" = ps: with ps; [ ]; + "datadog" = ps: with ps; [ datadog ]; + "deconz" = ps: with ps; [ ]; + "device_tracker.aruba" = ps: with ps; [ pexpect ]; + "device_tracker.asuswrt" = ps: with ps; [ pexpect ]; + "device_tracker.automatic" = ps: with ps; [ ]; + "device_tracker.bbox" = ps: with ps; [ ]; + "device_tracker.bluetooth_le_tracker" = ps: with ps; [ ]; + "device_tracker.bluetooth_tracker" = ps: with ps; [ ]; + "device_tracker.cisco_ios" = ps: with ps; [ pexpect ]; + "device_tracker.fritz" = ps: with ps; [ ]; + "device_tracker.icloud" = ps: with ps; [ ]; + "device_tracker.linksys_ap" = ps: with ps; [ beautifulsoup4 ]; + "device_tracker.mikrotik" = ps: with ps; [ ]; + "device_tracker.netgear" = ps: with ps; [ ]; + "device_tracker.nmap_tracker" = ps: with ps; [ ]; + "device_tracker.owntracks" = ps: with ps; [ libnacl ]; + "device_tracker.owntracks_http" = ps: with ps; [ libnacl ]; + "device_tracker.snmp" = ps: with ps; [ pysnmp ]; + "device_tracker.tile" = ps: with ps; [ ]; + "device_tracker.trackr" = ps: with ps; [ ]; + "device_tracker.unifi" = ps: with ps; [ pyunifi ]; + "device_tracker.unifi_direct" = ps: with ps; [ pexpect ]; + "device_tracker.upc_connect" = ps: with ps; [ defusedxml ]; + "digital_ocean" = ps: with ps; [ digital-ocean ]; + "discovery" = ps: with ps; [ netdisco ]; + "dominos" = ps: with ps; [ ]; + "doorbird" = ps: with ps; [ ]; + "dweet" = ps: with ps; [ ]; + "dyson" = ps: with ps; [ ]; + "ecobee" = ps: with ps; [ ]; + "eight_sleep" = ps: with ps; [ ]; + "emulated_hue" = ps: with ps; [ aiohttp-cors ]; + "enocean" = ps: with ps; [ ]; + "envisalink" = ps: with ps; [ ]; + "fan.xiaomi_miio" = ps: with ps; [ ]; + "feedreader" = ps: with ps; [ feedparser ]; + "ffmpeg" = ps: with ps; [ ]; + "frontend" = ps: with ps; [ user-agents ]; + "gc100" = ps: with ps; [ ]; + "goalfeed" = ps: with ps; [ ]; + "google" = ps: with ps; [ google_api_python_client oauth2client ]; + "hdmi_cec" = ps: with ps; [ ]; + "hive" = ps: with ps; [ ]; + "homematic" = ps: with ps; [ pyhomematic ]; + "http" = ps: with ps; [ aiohttp-cors ]; + "hue" = ps: with ps; [ ]; + "ifttt" = ps: with ps; [ ]; + "ihc" = ps: with ps; [ ]; + "image_processing.dlib_face_detect" = ps: with ps; [ ]; + "image_processing.dlib_face_identify" = ps: with ps; [ ]; + "image_processing.opencv" = ps: with ps; [ numpy ]; + "influxdb" = ps: with ps; [ influxdb ]; + "insteon_local" = ps: with ps; [ ]; + "insteon_plm" = ps: with ps; [ ]; + "iota" = ps: with ps; [ ]; + "isy994" = ps: with ps; [ ]; + "joaoapps_join" = ps: with ps; [ ]; + "juicenet" = ps: with ps; [ ]; + "keyboard" = ps: with ps; [ ]; + "keyboard_remote" = ps: with ps; [ ]; + "kira" = ps: with ps; [ ]; + "knx" = ps: with ps; [ ]; + "lametric" = ps: with ps; [ ]; + "light.avion" = ps: with ps; [ ]; "light.blinksticklight" = ps: with ps; [ BlinkStick ]; "light.blinkt" = ps: with ps; [ ]; - "sensor.bitcoin" = ps: with ps; [ ]; "light.decora" = ps: with ps; [ ]; - "sensor.bme680" = ps: with ps; [ ]; + "light.decora_wifi" = ps: with ps; [ ]; + "light.flux_led" = ps: with ps; [ ]; + "light.greenwave" = ps: with ps; [ ]; + "light.iglo" = ps: with ps; [ ]; + "light.lifx" = ps: with ps; [ ]; + "light.lifx_legacy" = ps: with ps; [ ]; + "light.limitlessled" = ps: with ps; [ ]; + "light.mystrom" = ps: with ps; [ ]; + "light.osramlightify" = ps: with ps; [ ]; + "light.piglow" = ps: with ps; [ ]; + "light.rpi_gpio_pwm" = ps: with ps; [ ]; + "light.sensehat" = ps: with ps; [ ]; + "light.tikteck" = ps: with ps; [ ]; + "light.tplink" = ps: with ps; [ ]; + "light.xiaomi_miio" = ps: with ps; [ ]; + "light.yeelight" = ps: with ps; [ ]; + "light.yeelightsunflower" = ps: with ps; [ ]; + "light.zengge" = ps: with ps; [ ]; + "linode" = ps: with ps; [ linode-api ]; + "lirc" = ps: with ps; [ ]; + "litejet" = ps: with ps; [ ]; + "lock.nello" = ps: with ps; [ ]; + "lock.nuki" = ps: with ps; [ ]; + "lock.sesame" = ps: with ps; [ ]; + "lutron" = ps: with ps; [ ]; + "lutron_caseta" = ps: with ps; [ ]; + "maxcube" = ps: with ps; [ ]; + "media_extractor" = ps: with ps; [ ]; + "media_player.anthemav" = ps: with ps; [ ]; + "media_player.aquostv" = ps: with ps; [ ]; + "media_player.bluesound" = ps: with ps; [ xmltodict ]; + "media_player.braviatv" = ps: with ps; [ ]; + "media_player.cast" = ps: with ps; [ PyChromecast ]; + "media_player.clementine" = ps: with ps; [ ]; + "media_player.cmus" = ps: with ps; [ ]; + "media_player.denonavr" = ps: with ps; [ ]; + "media_player.directv" = ps: with ps; [ ]; + "media_player.dunehd" = ps: with ps; [ ]; + "media_player.emby" = ps: with ps; [ ]; + "media_player.frontier_silicon" = ps: with ps; [ ]; + "media_player.gpmdp" = ps: with ps; [ ]; + "media_player.gstreamer" = ps: with ps; [ ]; + "media_player.kodi" = ps: with ps; [ jsonrpc-async jsonrpc-websocket ]; + "media_player.lg_netcast" = ps: with ps; [ ]; + "media_player.liveboxplaytv" = ps: with ps; [ ]; + "media_player.mediaroom" = ps: with ps; [ ]; + "media_player.monoprice" = ps: with ps; [ ]; + "media_player.mpd" = ps: with ps; [ mpd2 ]; + "media_player.nad" = ps: with ps; [ ]; + "media_player.nadtcp" = ps: with ps; [ ]; + "media_player.onkyo" = ps: with ps; [ onkyo-eiscp ]; + "media_player.openhome" = ps: with ps; [ ]; + "media_player.panasonic_viera" = ps: with ps; [ wakeonlan ]; + "media_player.pandora" = ps: with ps; [ pexpect ]; + "media_player.philips_js" = ps: with ps; [ ]; + "media_player.plex" = ps: with ps; [ ]; + "media_player.roku" = ps: with ps; [ ]; + "media_player.russound_rio" = ps: with ps; [ ]; + "media_player.russound_rnet" = ps: with ps; [ ]; + "media_player.samsungtv" = ps: with ps; [ wakeonlan ]; + "media_player.snapcast" = ps: with ps; [ ]; + "media_player.sonos" = ps: with ps; [ ]; + "media_player.soundtouch" = ps: with ps; [ libsoundtouch ]; + "media_player.spotify" = ps: with ps; [ ]; + "media_player.vizio" = ps: with ps; [ ]; + "media_player.vlc" = ps: with ps; [ ]; + "media_player.webostv" = ps: with ps; [ websockets ]; + "media_player.yamaha" = ps: with ps; [ ]; + "media_player.yamaha_musiccast" = ps: with ps; [ ]; + "media_player.ziggo_mediabox_xl" = ps: with ps; [ ]; + "melissa" = ps: with ps; [ ]; + "mercedesme" = ps: with ps; [ ]; + "mochad" = ps: with ps; [ ]; + "modbus" = ps: with ps; [ ]; + "mqtt" = ps: with ps; [ paho-mqtt ]; + "mqtt.server" = ps: with ps; [ hbmqtt ]; + "mychevy" = ps: with ps; [ ]; + "mycroft" = ps: with ps; [ ]; + "mysensors" = ps: with ps; [ ]; + "neato" = ps: with ps; [ ]; + "nest" = ps: with ps; [ ]; + "netatmo" = ps: with ps; [ ]; + "notify.apns" = ps: with ps; [ ]; "notify.aws_lambda" = ps: with ps; [ boto3 ]; "notify.aws_sns" = ps: with ps; [ boto3 ]; "notify.aws_sqs" = ps: with ps; [ boto3 ]; - "tts.amazon_polly" = ps: with ps; [ boto3 ]; - "sensor.broadlink" = ps: with ps; [ ]; - "switch.broadlink" = ps: with ps; [ ]; - "sensor.buienradar" = ps: with ps; [ ]; - "weather.buienradar" = ps: with ps; [ ]; - "calendar.caldav" = ps: with ps; [ ]; "notify.ciscospark" = ps: with ps; [ ]; - "coinbase" = ps: with ps; [ ]; - "sensor.coinmarketcap" = ps: with ps; [ ]; - "alarm_control_panel.concord232" = ps: with ps; [ ]; - "binary_sensor.concord232" = ps: with ps; [ ]; - "sensor.crimereports" = ps: with ps; [ ]; - "datadog" = ps: with ps; [ datadog ]; - "sensor.metoffice" = ps: with ps; [ ]; - "weather.metoffice" = ps: with ps; [ ]; - "light.decora_wifi" = ps: with ps; [ ]; - "device_tracker.upc_connect" = ps: with ps; [ defusedxml ]; - "sensor.deluge" = ps: with ps; [ ]; - "switch.deluge" = ps: with ps; [ ]; - "media_player.denonavr" = ps: with ps; [ ]; - "media_player.directv" = ps: with ps; [ ]; - "sensor.discogs" = ps: with ps; [ discogs_client ]; "notify.discord" = ps: with ps; [ ]; - "updater" = ps: with ps; [ distro ]; - "switch.digitalloggers" = ps: with ps; [ ]; + "notify.free_mobile" = ps: with ps; [ ]; + "notify.gntp" = ps: with ps; [ ]; + "notify.hipchat" = ps: with ps; [ ]; + "notify.html5" = ps: with ps; [ pyjwt ]; + "notify.joaoapps_join" = ps: with ps; [ ]; + "notify.kodi" = ps: with ps; [ jsonrpc-async ]; + "notify.lametric" = ps: with ps; [ ]; + "notify.mailgun" = ps: with ps; [ ]; + "notify.matrix" = ps: with ps; [ matrix-client ]; + "notify.message_bird" = ps: with ps; [ ]; + "notify.pushbullet" = ps: with ps; [ pushbullet ]; + "notify.pushetta" = ps: with ps; [ ]; + "notify.pushover" = ps: with ps; [ ]; + "notify.rocketchat" = ps: with ps; [ ]; + "notify.sendgrid" = ps: with ps; [ ]; + "notify.simplepush" = ps: with ps; [ ]; + "notify.slack" = ps: with ps; [ ]; + "notify.twitter" = ps: with ps; [ ]; + "notify.webostv" = ps: with ps; [ ]; "notify.xmpp" = ps: with ps; [ pyasn1-modules pyasn1 sleekxmpp ]; + "notify.yessssms" = ps: with ps; [ ]; + "nuheat" = ps: with ps; [ ]; + "nuimo_controller" = ps: with ps; [ ]; + "pilight" = ps: with ps; [ ]; + "prometheus" = ps: with ps; [ ]; + "python_script" = ps: with ps; [ ]; + "qwikswitch" = ps: with ps; [ ]; + "rainbird" = ps: with ps; [ ]; + "raincloud" = ps: with ps; [ ]; + "raspihats" = ps: with ps; [ ]; + "recorder" = ps: with ps; [ sqlalchemy ]; + "remember_the_milk" = ps: with ps; [ httplib2 ]; + "remote.harmony" = ps: with ps; [ ]; + "remote.itach" = ps: with ps; [ ]; + "remote.xiaomi_miio" = ps: with ps; [ ]; + "rflink" = ps: with ps; [ ]; + "rfxtrx" = ps: with ps; [ ]; + "ring" = ps: with ps; [ ]; + "rpi_gpio" = ps: with ps; [ ]; + "rpi_pfio" = ps: with ps; [ ]; + "satel_integra" = ps: with ps; [ ]; + "scene.hunterdouglas_powerview" = ps: with ps; [ ]; + "scsgate" = ps: with ps; [ ]; + "sensor.airvisual" = ps: with ps; [ ]; + "sensor.alpha_vantage" = ps: with ps; [ ]; + "sensor.bbox" = ps: with ps; [ ]; + "sensor.bh1750" = ps: with ps; [ ]; + "sensor.bitcoin" = ps: with ps; [ ]; + "sensor.blockchain" = ps: with ps; [ ]; + "sensor.bme280" = ps: with ps; [ ]; + "sensor.bme680" = ps: with ps; [ ]; + "sensor.broadlink" = ps: with ps; [ ]; + "sensor.buienradar" = ps: with ps; [ ]; + "sensor.coinmarketcap" = ps: with ps; [ ]; + "sensor.cpuspeed" = ps: with ps; [ ]; + "sensor.crimereports" = ps: with ps; [ ]; + "sensor.cups" = ps: with ps; [ ]; + "sensor.darksky" = ps: with ps; [ ]; + "sensor.deluge" = ps: with ps; [ ]; + "sensor.deutsche_bahn" = ps: with ps; [ ]; + "sensor.dht" = ps: with ps; [ ]; + "sensor.discogs" = ps: with ps; [ discogs_client ]; + "sensor.dnsip" = ps: with ps; [ aiodns ]; "sensor.dovado" = ps: with ps; [ ]; "sensor.dsmr" = ps: with ps; [ ]; - "dweet" = ps: with ps; [ ]; "sensor.dweet" = ps: with ps; [ ]; + "sensor.ebox" = ps: with ps; [ ]; + "sensor.eddystone_temperature" = ps: with ps; [ ]; "sensor.eliqonline" = ps: with ps; [ ]; - "enocean" = ps: with ps; [ ]; "sensor.envirophat" = ps: with ps; [ ]; - "sensor.season" = ps: with ps; [ ephem ]; - "keyboard_remote" = ps: with ps; [ ]; - "climate.honeywell" = ps: with ps; [ ]; - "image_processing.dlib_face_detect" = ps: with ps; [ ]; - "image_processing.dlib_face_identify" = ps: with ps; [ ]; + "sensor.etherscan" = ps: with ps; [ ]; "sensor.fastdotcom" = ps: with ps; [ ]; "sensor.fedex" = ps: with ps; [ ]; - "feedreader" = ps: with ps; [ feedparser ]; - "sensor.geo_rss_events" = ps: with ps; [ feedparser ]; + "sensor.fido" = ps: with ps; [ ]; "sensor.fitbit" = ps: with ps; [ ]; "sensor.fixer" = ps: with ps; [ ]; - "light.flux_led" = ps: with ps; [ ]; - "notify.free_mobile" = ps: with ps; [ ]; - "device_tracker.fritz" = ps: with ps; [ ]; "sensor.fritzbox_callmonitor" = ps: with ps; [ ]; "sensor.fritzbox_netmonitor" = ps: with ps; [ ]; - "switch.fritzdect" = ps: with ps; [ ]; - "media_player.frontier_silicon" = ps: with ps; [ ]; - "conversation" = ps: with ps; [ ]; - "tts.google" = ps: with ps; [ ]; - "device_tracker.bluetooth_le_tracker" = ps: with ps; [ ]; "sensor.gearbest" = ps: with ps; [ ]; + "sensor.geizhals" = ps: with ps; [ beautifulsoup4 ]; + "sensor.geo_rss_events" = ps: with ps; [ feedparser ]; "sensor.gitter" = ps: with ps; [ ]; - "notify.gntp" = ps: with ps; [ ]; - "google" = ps: with ps; [ google_api_python_client oauth2client ]; "sensor.google_travel_time" = ps: with ps; [ ]; "sensor.gpsd" = ps: with ps; [ ]; - "light.greenwave" = ps: with ps; [ ]; - "media_player.gstreamer" = ps: with ps; [ ]; - "ffmpeg" = ps: with ps; [ ]; - "media_player.philips_js" = ps: with ps; [ ]; - "mqtt.server" = ps: with ps; [ hbmqtt ]; - "climate.heatmiser" = ps: with ps; [ ]; - "switch.hikvisioncam" = ps: with ps; [ ]; - "notify.hipchat" = ps: with ps; [ ]; - "binary_sensor.workday" = ps: with ps; [ ]; - "frontend" = ps: with ps; [ user-agents ]; - "camera.onvif" = ps: with ps; [ ]; - "sensor.dht" = ps: with ps; [ ]; - "media_player.braviatv" = ps: with ps; [ ]; - "media_player.spotify" = ps: with ps; [ ]; - "netatmo" = ps: with ps; [ ]; - "neato" = ps: with ps; [ ]; - "sensor.sabnzbd" = ps: with ps; [ ]; - "switch.anel_pwrctrl" = ps: with ps; [ ]; - "switch.edimax" = ps: with ps; [ ]; "sensor.gtfs" = ps: with ps; [ ]; - "binary_sensor.flic" = ps: with ps; [ ]; - "media_player.lg_netcast" = ps: with ps; [ ]; - "sensor.bh1750" = ps: with ps; [ ]; - "sensor.bme280" = ps: with ps; [ ]; + "sensor.hp_ilo" = ps: with ps; [ ]; "sensor.htu21d" = ps: with ps; [ ]; - "light.iglo" = ps: with ps; [ ]; - "ihc" = ps: with ps; [ ]; - "influxdb" = ps: with ps; [ influxdb ]; - "sensor.influxdb" = ps: with ps; [ influxdb ]; - "insteon_local" = ps: with ps; [ ]; - "insteon_plm" = ps: with ps; [ ]; - "verisure" = ps: with ps; [ ]; - "media_player.kodi" = ps: with ps; [ ]; - "notify.kodi" = ps: with ps; [ ]; - "device_tracker.owntracks" = ps: with ps; [ libnacl ]; - "device_tracker.owntracks_http" = ps: with ps; [ libnacl ]; - "dyson" = ps: with ps; [ ]; - "camera.foscam" = ps: with ps; [ ]; - "device_tracker.mikrotik" = ps: with ps; [ ]; - "media_player.soundtouch" = ps: with ps; [ libsoundtouch ]; - "light.lifx_legacy" = ps: with ps; [ ]; - "light.osramlightify" = ps: with ps; [ ]; - "light.limitlessled" = ps: with ps; [ ]; - "linode" = ps: with ps; [ linode-api ]; - "media_player.liveboxplaytv" = ps: with ps; [ ]; - "lametric" = ps: with ps; [ ]; - "notify.lametric" = ps: with ps; [ ]; - "sensor.luftdaten" = ps: with ps; [ luftdaten ]; - "sensor.lyft" = ps: with ps; [ ]; - "notify.matrix" = ps: with ps; [ matrix-client ]; - "maxcube" = ps: with ps; [ ]; - "mercedesme" = ps: with ps; [ ]; - "notify.message_bird" = ps: with ps; [ ]; - "sensor.mfi" = ps: with ps; [ ]; - "switch.mfi" = ps: with ps; [ ]; - "sensor.miflora" = ps: with ps; [ ]; - "upnp" = ps: with ps; [ ]; - "sensor.mopar" = ps: with ps; [ ]; - "tts" = ps: with ps; [ mutagen ]; - "mychevy" = ps: with ps; [ ]; - "mycroft" = ps: with ps; [ ]; - "usps" = ps: with ps; [ ]; - "media_player.nad" = ps: with ps; [ ]; - "media_player.nadtcp" = ps: with ps; [ ]; - "discovery" = ps: with ps; [ netdisco ]; - "sensor.neurio_energy" = ps: with ps; [ ]; - "sensor.nederlandse_spoorwegen" = ps: with ps; [ ]; - "nuheat" = ps: with ps; [ ]; - "binary_sensor.trend" = ps: with ps; [ numpy ]; - "image_processing.opencv" = ps: with ps; [ numpy ]; - "climate.oem" = ps: with ps; [ ]; - "media_player.onkyo" = ps: with ps; [ ]; - "sensor.openevse" = ps: with ps; [ ]; - "media_player.openhome" = ps: with ps; [ ]; - "switch.orvibo" = ps: with ps; [ ]; - "mqtt" = ps: with ps; [ paho-mqtt ]; - "shiftr" = ps: with ps; [ paho-mqtt ]; - "media_player.panasonic_viera" = ps: with ps; [ ]; - "media_player.dunehd" = ps: with ps; [ ]; - "device_tracker.aruba" = ps: with ps; [ pexpect ]; - "device_tracker.asuswrt" = ps: with ps; [ pexpect ]; - "device_tracker.cisco_ios" = ps: with ps; [ pexpect ]; - "device_tracker.unifi_direct" = ps: with ps; [ pexpect ]; - "media_player.pandora" = ps: with ps; [ pexpect ]; - "hue" = ps: with ps; [ ]; - "rpi_pfio" = ps: with ps; [ ]; - "light.piglow" = ps: with ps; [ ]; - "pilight" = ps: with ps; [ ]; - "dominos" = ps: with ps; [ ]; - "media_player.plex" = ps: with ps; [ ]; - "sensor.plex" = ps: with ps; [ ]; - "sensor.mhz19" = ps: with ps; [ ]; - "sensor.serial_pm" = ps: with ps; [ ]; - "sensor.pocketcasts" = ps: with ps; [ ]; - "climate.proliphix" = ps: with ps; [ ]; - "prometheus" = ps: with ps; [ ]; - "sensor.systemmonitor" = ps: with ps; [ psutil ]; - "wink" = ps: with ps; [ ]; - "notify.pushbullet" = ps: with ps; [ pushbullet ]; - "sensor.pushbullet" = ps: with ps; [ pushbullet ]; - "notify.pushetta" = ps: with ps; [ ]; - "light.rpi_gpio_pwm" = ps: with ps; [ ]; - "canary" = ps: with ps; [ ]; - "sensor.cpuspeed" = ps: with ps; [ ]; - "melissa" = ps: with ps; [ ]; - "camera.synology" = ps: with ps; [ ]; - "hdmi_cec" = ps: with ps; [ ]; - "light.tplink" = ps: with ps; [ ]; - "switch.tplink" = ps: with ps; [ ]; - "rfxtrx" = ps: with ps; [ ]; - "sensor.tibber" = ps: with ps; [ ]; - "switch.dlink" = ps: with ps; [ ]; - "ads" = ps: with ps; [ ]; - "sensor.airvisual" = ps: with ps; [ ]; - "alarm_control_panel.alarmdotcom" = ps: with ps; [ ]; - "arlo" = ps: with ps; [ ]; - "apple_tv" = ps: with ps; [ ]; - "device_tracker.bbox" = ps: with ps; [ ]; - "sensor.bbox" = ps: with ps; [ ]; - "device_tracker.bluetooth_tracker" = ps: with ps; [ ]; - "media_player.cast" = ps: with ps; [ PyChromecast ]; - "media_player.cmus" = ps: with ps; [ ]; - "comfoconnect" = ps: with ps; [ ]; - "tts.microsoft" = ps: with ps; [ ]; - "sensor.cups" = ps: with ps; [ ]; - "daikin" = ps: with ps; [ ]; - "climate.daikin" = ps: with ps; [ ]; - "deconz" = ps: with ps; [ ]; - "zwave" = ps: with ps; [ pydispatcher ]; - "android_ip_webcam" = ps: with ps; [ ]; - "sensor.ebox" = ps: with ps; [ ]; - "climate.econet" = ps: with ps; [ ]; - "eight_sleep" = ps: with ps; [ ]; - "media_player.emby" = ps: with ps; [ ]; - "envisalink" = ps: with ps; [ ]; - "climate.ephember" = ps: with ps; [ ]; - "sensor.fido" = ps: with ps; [ ]; - "climate.flexit" = ps: with ps; [ ]; - "ifttt" = ps: with ps; [ ]; - "remote.harmony" = ps: with ps; [ ]; - "binary_sensor.hikvision" = ps: with ps; [ ]; - "hive" = ps: with ps; [ ]; - "homematic" = ps: with ps; [ pyhomematic ]; "sensor.hydroquebec" = ps: with ps; [ ]; - "alarm_control_panel.ialarm" = ps: with ps; [ ]; - "device_tracker.icloud" = ps: with ps; [ ]; + "sensor.imap" = ps: with ps; [ aioimaplib ]; + "sensor.influxdb" = ps: with ps; [ influxdb ]; "sensor.irish_rail_transport" = ps: with ps; [ ]; - "binary_sensor.iss" = ps: with ps; [ ]; - "remote.itach" = ps: with ps; [ ]; - "kira" = ps: with ps; [ ]; "sensor.kwb" = ps: with ps; [ ]; "sensor.lacrosse" = ps: with ps; [ ]; "sensor.lastfm" = ps: with ps; [ pylast ]; - "media_player.webostv" = ps: with ps; [ websockets ]; - "notify.webostv" = ps: with ps; [ ]; - "litejet" = ps: with ps; [ ]; + "sensor.linux_battery" = ps: with ps; [ batinfo ]; "sensor.loopenergy" = ps: with ps; [ ]; - "lutron_caseta" = ps: with ps; [ ]; - "lutron" = ps: with ps; [ ]; - "notify.mailgun" = ps: with ps; [ ]; - "media_player.mediaroom" = ps: with ps; [ ]; - "mochad" = ps: with ps; [ ]; - "modbus" = ps: with ps; [ ]; - "media_player.monoprice" = ps: with ps; [ ]; - "media_player.yamaha_musiccast" = ps: with ps; [ ]; - "cover.myq" = ps: with ps; [ ]; - "mysensors" = ps: with ps; [ ]; - "lock.nello" = ps: with ps; [ ]; - "device_tracker.netgear" = ps: with ps; [ ]; - "switch.netio" = ps: with ps; [ ]; - "lock.nuki" = ps: with ps; [ ]; + "sensor.luftdaten" = ps: with ps; [ luftdaten ]; + "sensor.lyft" = ps: with ps; [ ]; + "sensor.metoffice" = ps: with ps; [ ]; + "sensor.mfi" = ps: with ps; [ ]; + "sensor.mhz19" = ps: with ps; [ ]; + "sensor.miflora" = ps: with ps; [ ]; + "sensor.modem_callerid" = ps: with ps; [ ]; + "sensor.mopar" = ps: with ps; [ ]; + "sensor.mvglive" = ps: with ps; [ ]; + "sensor.nederlandse_spoorwegen" = ps: with ps; [ ]; + "sensor.neurio_energy" = ps: with ps; [ ]; "sensor.nut" = ps: with ps; [ ]; - "alarm_control_panel.nx584" = ps: with ps; [ ]; - "binary_sensor.nx584" = ps: with ps; [ ]; - "iota" = ps: with ps; [ ]; - "sensor.otp" = ps: with ps; [ ]; + "sensor.openevse" = ps: with ps; [ ]; "sensor.openweathermap" = ps: with ps; [ ]; - "weather.openweathermap" = ps: with ps; [ ]; + "sensor.otp" = ps: with ps; [ ]; + "sensor.plex" = ps: with ps; [ ]; + "sensor.pocketcasts" = ps: with ps; [ ]; "sensor.pollen" = ps: with ps; [ ]; - "qwikswitch" = ps: with ps; [ ]; - "rainbird" = ps: with ps; [ ]; - "climate.sensibo" = ps: with ps; [ ]; - "sensor.serial" = ps: with ps; [ ]; - "switch.acer_projector" = ps: with ps; [ pyserial ]; - "lock.sesame" = ps: with ps; [ ]; - "goalfeed" = ps: with ps; [ ]; - "sensor.sma" = ps: with ps; [ ]; - "device_tracker.snmp" = ps: with ps; [ pysnmp ]; - "sensor.snmp" = ps: with ps; [ pysnmp ]; - "switch.snmp" = ps: with ps; [ pysnmp ]; - "sensor.thinkingcleaner" = ps: with ps; [ ]; - "switch.thinkingcleaner" = ps: with ps; [ ]; - "sensor.blockchain" = ps: with ps; [ ]; - "media_player.clementine" = ps: with ps; [ ]; - "digital_ocean" = ps: with ps; [ digital-ocean ]; - "ecobee" = ps: with ps; [ ]; - "climate.eq3btsmart" = ps: with ps; [ ]; - "sensor.etherscan" = ps: with ps; [ ]; - "sensor.darksky" = ps: with ps; [ ]; - "weather.darksky" = ps: with ps; [ ]; - "gc100" = ps: with ps; [ ]; - "sensor.hp_ilo" = ps: with ps; [ ]; - "joaoapps_join" = ps: with ps; [ ]; - "notify.joaoapps_join" = ps: with ps; [ ]; - "juicenet" = ps: with ps; [ ]; - "lirc" = ps: with ps; [ ]; - "fan.xiaomi_miio" = ps: with ps; [ ]; - "light.xiaomi_miio" = ps: with ps; [ ]; - "remote.xiaomi_miio" = ps: with ps; [ ]; - "switch.xiaomi_miio" = ps: with ps; [ ]; - "vacuum.xiaomi_miio" = ps: with ps; [ ]; - "media_player.mpd" = ps: with ps; [ mpd2 ]; - "light.mystrom" = ps: with ps; [ ]; - "switch.mystrom" = ps: with ps; [ ]; - "nest" = ps: with ps; [ ]; - "device_tracker.nmap_tracker" = ps: with ps; [ ]; - "notify.pushover" = ps: with ps; [ ]; - "sensor.ripple" = ps: with ps; [ ]; - "media_player.roku" = ps: with ps; [ ]; - "sensor.sochain" = ps: with ps; [ ]; - "sensor.synologydsm" = ps: with ps; [ ]; - "tado" = ps: with ps; [ ]; - "telegram_bot" = ps: with ps; [ python-telegram-bot ]; - "sensor.twitch" = ps: with ps; [ ]; - "velbus" = ps: with ps; [ ]; - "media_player.vlc" = ps: with ps; [ ]; - "sensor.swiss_public_transport" = ps: with ps; [ ]; - "alarm_control_panel.egardia" = ps: with ps; [ ]; - "sensor.whois" = ps: with ps; [ ]; - "device_tracker.tile" = ps: with ps; [ ]; - "climate.touchline" = ps: with ps; [ ]; - "device_tracker.trackr" = ps: with ps; [ ]; - "tradfri" = ps: with ps; [ ]; - "device_tracker.unifi" = ps: with ps; [ ]; - "keyboard" = ps: with ps; [ ]; - "vera" = ps: with ps; [ ]; - "media_player.vizio" = ps: with ps; [ ]; - "velux" = ps: with ps; [ ]; - "wemo" = ps: with ps; [ ]; - "camera.xeoma" = ps: with ps; [ ]; - "zabbix" = ps: with ps; [ ]; + "sensor.pushbullet" = ps: with ps; [ pushbullet ]; "sensor.qnap" = ps: with ps; [ ]; - "switch.rachio" = ps: with ps; [ ]; - "climate.radiotherm" = ps: with ps; [ ]; - "raincloud" = ps: with ps; [ ]; - "raspihats" = ps: with ps; [ ]; - "switch.rainmachine" = ps: with ps; [ ]; - "python_script" = ps: with ps; [ ]; - "rflink" = ps: with ps; [ ]; - "ring" = ps: with ps; [ ]; - "notify.rocketchat" = ps: with ps; [ ]; - "vacuum.roomba" = ps: with ps; [ ]; - "switch.rpi_rf" = ps: with ps; [ ]; - "media_player.russound_rnet" = ps: with ps; [ ]; - "media_player.russound_rio" = ps: with ps; [ ]; - "media_player.yamaha" = ps: with ps; [ ]; - "media_player.samsungtv" = ps: with ps; [ ]; - "satel_integra" = ps: with ps; [ ]; - "sensor.deutsche_bahn" = ps: with ps; [ ]; - "scsgate" = ps: with ps; [ ]; - "notify.sendgrid" = ps: with ps; [ ]; - "light.sensehat" = ps: with ps; [ ]; + "sensor.ripple" = ps: with ps; [ ]; + "sensor.sabnzbd" = ps: with ps; [ ]; + "sensor.scrape" = ps: with ps; [ beautifulsoup4 ]; + "sensor.season" = ps: with ps; [ ephem ]; "sensor.sensehat" = ps: with ps; [ ]; - "media_player.aquostv" = ps: with ps; [ ]; + "sensor.serial" = ps: with ps; [ ]; + "sensor.serial_pm" = ps: with ps; [ ]; "sensor.shodan" = ps: with ps; [ ]; - "notify.simplepush" = ps: with ps; [ ]; - "alarm_control_panel.simplisafe" = ps: with ps; [ ]; - "skybell" = ps: with ps; [ ]; - "notify.slack" = ps: with ps; [ ]; - "sleepiq" = ps: with ps; [ ]; - "media_player.snapcast" = ps: with ps; [ ]; + "sensor.sma" = ps: with ps; [ ]; + "sensor.snmp" = ps: with ps; [ pysnmp ]; + "sensor.sochain" = ps: with ps; [ ]; "sensor.speedtest" = ps: with ps; [ ]; - "recorder" = ps: with ps; [ sqlalchemy ]; "sensor.sql" = ps: with ps; [ sqlalchemy ]; - "statsd" = ps: with ps; [ statsd ]; "sensor.steam_online" = ps: with ps; [ ]; - "tahoma" = ps: with ps; [ ]; + "sensor.swiss_hydrological_data" = ps: with ps; [ xmltodict ]; + "sensor.swiss_public_transport" = ps: with ps; [ ]; + "sensor.synologydsm" = ps: with ps; [ ]; + "sensor.systemmonitor" = ps: with ps; [ psutil ]; + "sensor.sytadin" = ps: with ps; [ beautifulsoup4 ]; "sensor.tank_utility" = ps: with ps; [ ]; - "binary_sensor.tapsaff" = ps: with ps; [ ]; - "tellstick" = ps: with ps; [ ]; - "tellduslive" = ps: with ps; [ ]; + "sensor.ted5000" = ps: with ps; [ xmltodict ]; "sensor.temper" = ps: with ps; [ ]; - "tesla" = ps: with ps; [ ]; - "thingspeak" = ps: with ps; [ ]; - "light.tikteck" = ps: with ps; [ ]; - "calendar.todoist" = ps: with ps; [ todoist ]; - "toon" = ps: with ps; [ ]; - "alarm_control_panel.totalconnect" = ps: with ps; [ ]; + "sensor.thinkingcleaner" = ps: with ps; [ ]; + "sensor.tibber" = ps: with ps; [ ]; "sensor.transmission" = ps: with ps; [ transmissionrpc ]; - "switch.transmission" = ps: with ps; [ transmissionrpc ]; - "twilio" = ps: with ps; [ twilio ]; + "sensor.travisci" = ps: with ps; [ ]; + "sensor.twitch" = ps: with ps; [ ]; "sensor.uber" = ps: with ps; [ ]; "sensor.ups" = ps: with ps; [ ]; - "camera.uvc" = ps: with ps; [ ]; - "climate.venstar" = ps: with ps; [ ]; - "volvooncall" = ps: with ps; [ ]; "sensor.vasttrafik" = ps: with ps; [ ]; - "vultr" = ps: with ps; [ vultr ]; - "wake_on_lan" = ps: with ps; [ ]; - "switch.wake_on_lan" = ps: with ps; [ ]; "sensor.waqi" = ps: with ps; [ ]; - "cloud" = ps: with ps; [ ]; - "waterfurnace" = ps: with ps; [ ]; - "media_player.gpmdp" = ps: with ps; [ ]; - "spc" = ps: with ps; [ websockets ]; - "zigbee" = ps: with ps; [ ]; + "sensor.whois" = ps: with ps; [ ]; "sensor.xbox_live" = ps: with ps; [ ]; - "knx" = ps: with ps; [ ]; - "media_player.bluesound" = ps: with ps; [ xmltodict ]; - "sensor.swiss_hydrological_data" = ps: with ps; [ xmltodict ]; - "sensor.ted5000" = ps: with ps; [ xmltodict ]; - "sensor.yr" = ps: with ps; [ xmltodict ]; "sensor.yahoo_finance" = ps: with ps; [ ]; + "sensor.yr" = ps: with ps; [ xmltodict ]; "sensor.yweather" = ps: with ps; [ ]; + "shiftr" = ps: with ps; [ paho-mqtt ]; + "skybell" = ps: with ps; [ ]; + "sleepiq" = ps: with ps; [ ]; + "spc" = ps: with ps; [ websockets ]; + "statsd" = ps: with ps; [ statsd ]; + "switch.acer_projector" = ps: with ps; [ pyserial ]; + "switch.anel_pwrctrl" = ps: with ps; [ ]; + "switch.broadlink" = ps: with ps; [ ]; + "switch.deluge" = ps: with ps; [ ]; + "switch.digitalloggers" = ps: with ps; [ ]; + "switch.dlink" = ps: with ps; [ ]; + "switch.edimax" = ps: with ps; [ ]; + "switch.fritzdect" = ps: with ps; [ ]; + "switch.hikvisioncam" = ps: with ps; [ ]; + "switch.mfi" = ps: with ps; [ ]; + "switch.mystrom" = ps: with ps; [ ]; + "switch.netio" = ps: with ps; [ ]; + "switch.orvibo" = ps: with ps; [ ]; + "switch.rachio" = ps: with ps; [ ]; + "switch.rainmachine" = ps: with ps; [ ]; + "switch.rpi_rf" = ps: with ps; [ ]; + "switch.snmp" = ps: with ps; [ pysnmp ]; + "switch.thinkingcleaner" = ps: with ps; [ ]; + "switch.tplink" = ps: with ps; [ ]; + "switch.transmission" = ps: with ps; [ transmissionrpc ]; + "switch.wake_on_lan" = ps: with ps; [ wakeonlan ]; + "switch.xiaomi_miio" = ps: with ps; [ ]; + "tado" = ps: with ps; [ ]; + "tahoma" = ps: with ps; [ ]; + "telegram_bot" = ps: with ps; [ python-telegram-bot ]; + "tellduslive" = ps: with ps; [ ]; + "tellstick" = ps: with ps; [ ]; + "tesla" = ps: with ps; [ ]; + "thingspeak" = ps: with ps; [ ]; + "toon" = ps: with ps; [ ]; + "tradfri" = ps: with ps; [ ]; + "tts" = ps: with ps; [ mutagen ]; + "tts.amazon_polly" = ps: with ps; [ boto3 ]; + "tts.baidu" = ps: with ps; [ ]; + "tts.google" = ps: with ps; [ ]; + "tts.microsoft" = ps: with ps; [ ]; + "twilio" = ps: with ps; [ twilio ]; + "updater" = ps: with ps; [ distro ]; + "upnp" = ps: with ps; [ ]; + "usps" = ps: with ps; [ ]; + "vacuum.roomba" = ps: with ps; [ ]; + "vacuum.xiaomi_miio" = ps: with ps; [ ]; + "velbus" = ps: with ps; [ ]; + "velux" = ps: with ps; [ ]; + "vera" = ps: with ps; [ ]; + "verisure" = ps: with ps; [ ]; + "volvooncall" = ps: with ps; [ ]; + "vultr" = ps: with ps; [ vultr ]; + "wake_on_lan" = ps: with ps; [ wakeonlan ]; + "waterfurnace" = ps: with ps; [ ]; + "weather.buienradar" = ps: with ps; [ ]; + "weather.darksky" = ps: with ps; [ ]; + "weather.metoffice" = ps: with ps; [ ]; + "weather.openweathermap" = ps: with ps; [ ]; "weather.yweather" = ps: with ps; [ ]; - "light.yeelight" = ps: with ps; [ ]; - "light.yeelightsunflower" = ps: with ps; [ ]; - "media_extractor" = ps: with ps; [ ]; - "light.zengge" = ps: with ps; [ ]; + "wemo" = ps: with ps; [ ]; + "wink" = ps: with ps; [ ]; + "xiaomi_aqara" = ps: with ps; [ ]; + "zabbix" = ps: with ps; [ ]; "zeroconf" = ps: with ps; [ zeroconf ]; - "media_player.ziggo_mediabox_xl" = ps: with ps; [ ]; + "zha" = ps: with ps; [ ]; + "zigbee" = ps: with ps; [ ]; + "zwave" = ps: with ps; [ pydispatcher ]; }; } diff --git a/pkgs/servers/home-assistant/default.nix b/pkgs/servers/home-assistant/default.nix index edc3539b0bdf..cb9424ad5cfc 100644 --- a/pkgs/servers/home-assistant/default.nix +++ b/pkgs/servers/home-assistant/default.nix @@ -28,6 +28,13 @@ let sha256 = "14zbnbn53yvrpv79ch6n02myq9b4winjkaykzi356sfqb7f3d16g"; }; }); + voluptuous = super.voluptuous.overridePythonAttrs (oldAttrs: rec { + version = "0.10.5"; + src = oldAttrs.src.override { + inherit version; + sha256 = "15i3gaap8ilhpbah1ffc6q415wkvliqxilc6s69a4rinvkw6cx3s"; + }; + }); hass-frontend = super.callPackage ./frontend.nix { }; }; }; diff --git a/pkgs/servers/home-assistant/parse-requirements.py b/pkgs/servers/home-assistant/parse-requirements.py index 5af794e75fa4..3aa9823dbe8b 100755 --- a/pkgs/servers/home-assistant/parse-requirements.py +++ b/pkgs/servers/home-assistant/parse-requirements.py @@ -14,6 +14,7 @@ # Then, a Nix attribute set mapping component name to dependencies is created. from urllib.request import urlopen +from collections import OrderedDict import subprocess import os import sys @@ -73,7 +74,7 @@ version = get_version() print('Generating component-packages.nix for version {}'.format(version)) requirements = fetch_reqs(version=version) build_inputs = {} -for component, reqs in requirements.items(): +for component, reqs in OrderedDict(sorted(requirements.items())).items(): attr_paths = [] for req in reqs: try: diff --git a/pkgs/servers/http/hiawatha/default.nix b/pkgs/servers/http/hiawatha/default.nix index 2267c07e6f98..99900bbdb3ea 100644 --- a/pkgs/servers/http/hiawatha/default.nix +++ b/pkgs/servers/http/hiawatha/default.nix @@ -12,11 +12,11 @@ assert enableSSL -> openssl !=null; stdenv.mkDerivation rec { name = "hiawatha-${version}"; - version = "10.5"; + version = "10.7"; src = fetchurl { url = "https://github.com/hsleisink/hiawatha/archive/v${version}.tar.gz"; - sha256 = "11nqdmmhq1glgsiza8pfh69wmpgwl51vb3xijmpcxv63a7ywp4fj"; + sha256 = "1k0vgpfkmdxmkimq4ab70cqwhj5qwr4pzq7nnv957ah8cw2ijy1z"; }; buildInputs = [ cmake libxslt zlib libxml2 ] ++ stdenv.lib.optional enableSSL openssl ; diff --git a/pkgs/servers/http/pshs/default.nix b/pkgs/servers/http/pshs/default.nix index 4eb74c8cb534..c244b3a1000a 100644 --- a/pkgs/servers/http/pshs/default.nix +++ b/pkgs/servers/http/pshs/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "pshs-${version}"; - version = "0.3.1"; + version = "0.3.2"; src = fetchFromGitHub { owner = "mgorny"; repo = "pshs"; rev = "v${version}"; - sha256 = "18mhxdjlyr21gghzkrrlp0imicb6bqf741p0a21c2rkvs4bv8c1w"; + sha256 = "1ffdyv5qiqdg3jq8y91fsml046g88d7fyy2k81yii11jw3yx2js0"; }; nativeBuildInputs = [ autoreconfHook pkgconfig ]; diff --git a/pkgs/servers/http/thttpd/default.nix b/pkgs/servers/http/thttpd/default.nix index 08e682aa7169..c234a1ae1ee7 100644 --- a/pkgs/servers/http/thttpd/default.nix +++ b/pkgs/servers/http/thttpd/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "thttpd-${version}"; - version = "2.27"; + version = "2.28"; src = fetchurl { url = "http://acme.com/software/thttpd/${name}.tar.gz"; - sha256 = "0ykda5k1zzzag59zbd4bkzj1psavq0xnpy7vpk19rhx7mlvvri5i"; + sha256 = "0a03w7wg994dizdb37pf4kd9s5lf2q414721jfqnrqpdshlzjll5"; }; prePatch = '' diff --git a/pkgs/servers/http/yaws/default.nix b/pkgs/servers/http/yaws/default.nix index 67172edfd36e..ed7765b15403 100644 --- a/pkgs/servers/http/yaws/default.nix +++ b/pkgs/servers/http/yaws/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "yaws-${version}"; - version = "2.0"; + version = "2.0.4"; src = fetchurl { url = "http://yaws.hyber.org/download/${name}.tar.gz"; - sha256 = "1gwk44a07n7yvg900yrlfc6qpvjl64k2h2hddd1jaaay8lgpcch6"; + sha256 = "1ig6q4waqlb6h1hhrly7hslfnqczlbm79vvhr5j7rp5a2p1pfrns"; }; # The tarball includes a symlink yaws -> yaws-1.95, which seems to be diff --git a/pkgs/servers/mail/postgrey/default.nix b/pkgs/servers/mail/postgrey/default.nix index b221bfa0dd4c..1836d0e5cf36 100644 --- a/pkgs/servers/mail/postgrey/default.nix +++ b/pkgs/servers/mail/postgrey/default.nix @@ -8,12 +8,12 @@ let policy-test-flags = mk-perl-flags (with perlPackages; [ ParseSyslog ]); - version = "1.36"; + version = "1.37"; name = "postgrey-${version}"; in runCommand name { src = fetchurl { url = "http://postgrey.schweikert.ch/pub/${name}.tar.gz"; - sha256 = "09jzb246ki988389r9gryigriv9sravk40q75fih5n0q4p2ghax2"; + sha256 = "1xx51xih4711vrvc6d57il9ccallbljj5zhgqdb07jzmz11rakgz"; }; meta = with stdenv.lib; { description = "A postfix policy server to provide greylisting"; diff --git a/pkgs/servers/mail/pypolicyd-spf/default.nix b/pkgs/servers/mail/pypolicyd-spf/default.nix new file mode 100644 index 000000000000..d5e410a86c1f --- /dev/null +++ b/pkgs/servers/mail/pypolicyd-spf/default.nix @@ -0,0 +1,26 @@ +{ lib, buildPythonApplication, fetchurl, pyspf }: + +buildPythonApplication rec { + name = "pypolicyd-spf-${version}"; + majorVersion = "2.0"; + version = "${majorVersion}.2"; + + src = fetchurl { + url = "https://launchpad.net/pypolicyd-spf/${majorVersion}/${version}/+download/${name}.tar.gz"; + sha256 = "1nm8y1jjgx6mxrbcxrbdnmkf8vglwp0wiw6jipzh641wb24gi76z"; + }; + + propagatedBuildInputs = [ pyspf ]; + + preBuild = '' + substituteInPlace setup.py --replace "'/etc'" "'$out/etc'" + ''; + + meta = with lib; { + homepage = https://launchpad.net/pypolicyd-spf/; + description = "Postfix policy engine for Sender Policy Framework (SPF) checking"; + maintainers = with maintainers; [ abbradar ]; + license = licenses.asl20; + platforms = platforms.all; + }; +} diff --git a/pkgs/servers/mail/rspamd/default.nix b/pkgs/servers/mail/rspamd/default.nix index 2b81edf48ba3..3e3132798068 100644 --- a/pkgs/servers/mail/rspamd/default.nix +++ b/pkgs/servers/mail/rspamd/default.nix @@ -6,13 +6,13 @@ in stdenv.mkDerivation rec { name = "rspamd-${version}"; - version = "1.6.5"; + version = "1.6.6"; src = fetchFromGitHub { owner = "vstakhov"; repo = "rspamd"; rev = version; - sha256 = "1idy81absr5w677d4jlzic33hsrn0zjzbfhhdn6viym9vr8dvjx9"; + sha256 = "04jqrki7rlxywdig264kavy1h5882rspi2drkbdzrk35jjq8rh3h"; }; nativeBuildInputs = [ cmake pkgconfig perl ]; diff --git a/pkgs/servers/mattermost/default.nix b/pkgs/servers/mattermost/default.nix index 4890ed5babf6..f0c1a0fcec55 100644 --- a/pkgs/servers/mattermost/default.nix +++ b/pkgs/servers/mattermost/default.nix @@ -1,27 +1,32 @@ { stdenv, fetchurl, fetchFromGitHub, buildGoPackage }: +let + version = "4.7.2"; + goPackagePath = "github.com/mattermost/mattermost-server"; + buildFlags = "-ldflags \"-X '${goPackagePath}/model.BuildNumber=nixpkgs-${version}'\""; +in + buildGoPackage rec { name = "mattermost-${version}"; - version = "4.7.0"; src = fetchFromGitHub { owner = "mattermost"; repo = "mattermost-server"; rev = "v${version}"; - sha256 = "11rw2m26mf4x6xbxkf37c1j16kyxx059jv3cdajkpv31xn82s7iv"; + sha256 = "129rvmwf9c19jbdpiclysb870svs2fbhdybcal0jbmzgx2zr8qma"; }; webApp = fetchurl { url = "https://releases.mattermost.com/${version}/mattermost-team-${version}-linux-amd64.tar.gz"; - sha256 = "09dzkvrwj4ynk8yqrcbnhmv9hm3z3r3vyjrbzpvmznfrwcccc7lr"; + sha256 = "14gr7zzx77q862qccjcdwrzd6n8g2z8yngw8aa4g3q6hypsqi4v3"; }; - goPackagePath = "github.com/mattermost/mattermost-server"; + inherit goPackagePath; buildPhase = '' runHook preBuild cd go/src/${goPackagePath}/cmd/platform - go install + go install ${buildFlags} runHook postBuild ''; @@ -35,7 +40,7 @@ buildGoPackage rec { ''; meta = with stdenv.lib; { - description = "Open-Source, self-hosted Slack-alternative"; + description = "Open-source, self-hosted Slack-alternative"; homepage = https://www.mattermost.org; license = with licenses; [ agpl3 asl20 ]; maintainers = with maintainers; [ fpletz ryantm ]; diff --git a/pkgs/servers/memcached/default.nix b/pkgs/servers/memcached/default.nix index c625ce575f2e..66e586a69d94 100644 --- a/pkgs/servers/memcached/default.nix +++ b/pkgs/servers/memcached/default.nix @@ -1,12 +1,12 @@ {stdenv, fetchurl, cyrus_sasl, libevent}: stdenv.mkDerivation rec { - version = "1.5.4"; + version = "1.5.5"; name = "memcached-${version}"; src = fetchurl { url = "http://memcached.org/files/${name}.tar.gz"; - sha256 = "1m03fhzq1f9byk2agccsr0x458niqqjpips5mbcgzhm4kylczhz0"; + sha256 = "1v87gvhxih5jav20cp9zdddna31s968xdm2iskc9mqzb5li6di72"; }; buildInputs = [cyrus_sasl libevent]; diff --git a/pkgs/servers/misc/subsonic/default.nix b/pkgs/servers/misc/subsonic/default.nix index b84dd21c3571..f546b0b075e5 100644 --- a/pkgs/servers/misc/subsonic/default.nix +++ b/pkgs/servers/misc/subsonic/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, jre }: -let version = "6.0"; in +let version = "6.1.3"; in stdenv.mkDerivation rec { name = "subsonic-${version}"; @@ -8,7 +8,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "mirror://sourceforge/subsonic/subsonic-${version}-standalone.tar.gz"; - sha256 = "0aw7lz7bkhqvjj3lkk68n2aqr5l84s91cgifg2379w2j7dgd056z"; + sha256 = "1v21gfymaqcx6n6d88hvha60q9hgj5z1wsac5gcwq7cjah1893jx"; }; inherit jre; diff --git a/pkgs/servers/monitoring/grafana/default.nix b/pkgs/servers/monitoring/grafana/default.nix index 2f9a141024b0..65304541c8d6 100644 --- a/pkgs/servers/monitoring/grafana/default.nix +++ b/pkgs/servers/monitoring/grafana/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { version = "4.6.3"; - name = "grafana-v${version}"; + name = "grafana-${version}"; goPackagePath = "github.com/grafana/grafana"; src = fetchFromGitHub { diff --git a/pkgs/servers/monitoring/kapacitor/default.nix b/pkgs/servers/monitoring/kapacitor/default.nix index 804826941f21..409801e8b7dc 100644 --- a/pkgs/servers/monitoring/kapacitor/default.nix +++ b/pkgs/servers/monitoring/kapacitor/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { name = "kapacitor-${version}"; - version = "1.0.0"; + version = "1.4.0"; goPackagePath = "github.com/influxdata/kapacitor"; @@ -10,7 +10,7 @@ buildGoPackage rec { owner = "influxdata"; repo = "kapacitor"; rev = "v${version}"; - sha256 = "14l9bhj6qdif79s4dyqqbnjgj3m4iarvw0ckld1wdhpdgvl8w9qh"; + sha256 = "1qanf7qljzqqkyw2cdazg0ll13q8a3fs3sqydcgfbgpdmf707sj2"; }; meta = with lib; { diff --git a/pkgs/servers/monitoring/nagios/default.nix b/pkgs/servers/monitoring/nagios/default.nix index b0e2f29a3b48..47bc6d58da90 100644 --- a/pkgs/servers/monitoring/nagios/default.nix +++ b/pkgs/servers/monitoring/nagios/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "nagios-${version}"; - version = "4.2.4"; + version = "4.3.4"; src = fetchurl { url = "mirror://sourceforge/nagios/nagios-4.x/${name}/${name}.tar.gz"; - sha256 = "0w0blbwiw0ps04b7gkyyk89qkgwsxh6gydhmggbm1kl3ar3mq1dh"; + sha256 = "1wa4m952sb23dqi5w759adimsp21bkhp598rpq9dnhz3v497h2y9"; }; patches = [ ./nagios.patch ]; diff --git a/pkgs/servers/nextcloud/default.nix b/pkgs/servers/nextcloud/default.nix index 70c252d395f8..2e423246c515 100644 --- a/pkgs/servers/nextcloud/default.nix +++ b/pkgs/servers/nextcloud/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name= "nextcloud-${version}"; - version = "12.0.5"; + version = "13.0.0"; src = fetchurl { url = "https://download.nextcloud.com/server/releases/${name}.tar.bz2"; - sha256 = "0hya524d8wqia5v2wz8cmasi526j97z6d0l1h7l7j442wsn2kgn8"; + sha256 = "38e6064432a2d1a044f219028d3fd46cb7a943a47e11eef346810bd289705aec"; }; installPhase = '' diff --git a/pkgs/servers/pulseaudio/default.nix b/pkgs/servers/pulseaudio/default.nix index 2f102b58f141..6a65e8d03201 100644 --- a/pkgs/servers/pulseaudio/default.nix +++ b/pkgs/servers/pulseaudio/default.nix @@ -36,11 +36,11 @@ stdenv.mkDerivation rec { name = "${if libOnly then "lib" else ""}pulseaudio-${version}"; - version = "11.0"; + version = "11.1"; src = fetchurl { url = "http://freedesktop.org/software/pulseaudio/releases/pulseaudio-${version}.tar.xz"; - sha256 = "0sf92knqkvqmfhrbz4vlsagzqlps72wycpmln5dygicg07a0a8q7"; + sha256 = "17ndr6kc7hpv4ih4gygwlcpviqifbkvnk4fbwf4n25kpb991qlpj"; }; patches = [ ./caps-fix.patch ] diff --git a/pkgs/servers/quagga/default.nix b/pkgs/servers/quagga/default.nix index 68c9b7a59362..c6f150938ac6 100644 --- a/pkgs/servers/quagga/default.nix +++ b/pkgs/servers/quagga/default.nix @@ -3,11 +3,11 @@ stdenv.mkDerivation rec { name = "quagga-${version}"; - version = "1.2.2"; + version = "1.2.4"; src = fetchurl { url = "mirror://savannah/quagga/${name}.tar.gz"; - sha256 = "0c99rjjc62xl5kwvx2pwyvs0709vbwax1qydqbqf6r7fpvr24bjj"; + sha256 = "1lsksqxij5f1llqn86pkygrf5672kvrqn1kvxghi169hqf1c0r73"; }; buildInputs = diff --git a/pkgs/servers/rt/default.nix b/pkgs/servers/rt/default.nix index 82818037072a..dcbfc40d7ddd 100644 --- a/pkgs/servers/rt/default.nix +++ b/pkgs/servers/rt/default.nix @@ -33,11 +33,11 @@ stdenv.mkDerivation rec { name = "rt-${version}"; - version = "4.4.0"; + version = "4.4.2"; src = fetchurl { url = "https://download.bestpractical.com/pub/rt/release/${name}.tar.gz"; - sha256 = "1hgz50fxv9zdcngww083aqh8vzyk148lm7mcivxflpnsqfw3696x"; + sha256 = "0s5ykc5imcii66zkzcb8lf8adkr8zlbc2ikcpkaxzcccikhndqxj"; }; patches = [ ./override-generated.patch ]; diff --git a/pkgs/servers/search/groonga/default.nix b/pkgs/servers/search/groonga/default.nix index 25cd46aa98b2..e3555d0076f6 100644 --- a/pkgs/servers/search/groonga/default.nix +++ b/pkgs/servers/search/groonga/default.nix @@ -7,11 +7,11 @@ stdenv.mkDerivation rec { name = "groonga-${version}"; - version = "7.1.0"; + version = "8.0.0"; src = fetchurl { url = "http://packages.groonga.org/source/groonga/${name}.tar.gz"; - sha256 = "1v0dyahlq7801bgcyvawj8waw6z84r0sr90x2b8nnrisrac3b8m7"; + sha256 = "14il1biqpx5qs5dkmsrikw33pc8gj8scmr90y639wap87z5i3dcz"; }; buildInputs = with stdenv.lib; diff --git a/pkgs/servers/search/sphinxsearch/default.nix b/pkgs/servers/search/sphinxsearch/default.nix index ead0c095d5c9..7ba23f61fedb 100644 --- a/pkgs/servers/search/sphinxsearch/default.nix +++ b/pkgs/servers/search/sphinxsearch/default.nix @@ -1,8 +1,8 @@ { stdenv, fetchurl, pkgconfig, - version ? "2.2.8", + version ? "2.2.11", mainSrc ? fetchurl { url = "http://sphinxsearch.com/files/sphinx-${version}-release.tar.gz"; - sha256 = "1q6jdw5g81k7ciw9fhwklb5ifgb8zna39795m0x0lbvwjbk3ampv"; + sha256 = "1aa1mh32y019j8s3sjzn4vwi0xn83dwgl685jnbgh51k16gh6qk6"; } }: diff --git a/pkgs/servers/smcroute/default.nix b/pkgs/servers/smcroute/default.nix index d9a4f4733f73..b1d614bc5cf0 100644 --- a/pkgs/servers/smcroute/default.nix +++ b/pkgs/servers/smcroute/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "smcroute-${version}"; - version = "2.3.1"; + version = "2.4.0"; src = fetchFromGitHub { owner = "troglobit"; repo = "smcroute"; rev = version; - sha256 = "0a1sgf9p39gbfrh7bhfg1hjqa6y18i7cig7bffmv7spqnvb50zx5"; + sha256 = "12xwdwvl9h269armwak7grm4g944j2c89srha4lqx2zndx1ycg1r"; }; nativeBuildInputs = [ autoreconfHook ]; diff --git a/pkgs/servers/softether/4.18.nix b/pkgs/servers/softether/4.18.nix index 69c6cbe2c864..5b0d15136f89 100644 --- a/pkgs/servers/softether/4.18.nix +++ b/pkgs/servers/softether/4.18.nix @@ -1,5 +1,6 @@ { stdenv, fetchurl -, openssl, readline, ncurses, zlib }: +, openssl, readline, ncurses, zlib +, dataDir ? "/var/lib/softether" }: let os = if stdenv.isLinux then "1" @@ -17,7 +18,6 @@ stdenv.mkDerivation rec { version = "4.18"; build = "9570"; compiledDate = "2015.07.26"; - dataDir = "/var/lib/softether"; src = fetchurl { url = "http://www.softether-download.com/files/softether/v${version}-${build}-rtm-${compiledDate}-tree/Source_Code/softether-src-v${version}-${build}-rtm.tar.gz"; @@ -48,6 +48,6 @@ stdenv.mkDerivation rec { homepage = https://www.softether.org/; license = licenses.gpl2; maintainers = [ maintainers.rick68 ]; - platforms = platforms.linux; + platforms = filter (p: p != "aarch64-linux") platforms.linux; }; } diff --git a/pkgs/servers/softether/4.20.nix b/pkgs/servers/softether/4.20.nix index c6ef5a3a4df2..91dd0d0411f8 100644 --- a/pkgs/servers/softether/4.20.nix +++ b/pkgs/servers/softether/4.20.nix @@ -1,5 +1,6 @@ { stdenv, fetchurl -, openssl, readline, ncurses, zlib }: +, openssl, readline, ncurses, zlib +, dataDir ? "/var/lib/softether" }: let os = if stdenv.isLinux then "1" @@ -17,7 +18,6 @@ stdenv.mkDerivation rec { version = "4.20"; build = "9608"; compiledDate = "2016.04.17"; - dataDir = "/var/lib/softether"; src = fetchurl { url = "http://www.softether-download.com/files/softether/v${version}-${build}-rtm-${compiledDate}-tree/Source_Code/softether-src-v${version}-${build}-rtm.tar.gz"; @@ -48,6 +48,6 @@ stdenv.mkDerivation rec { homepage = https://www.softether.org/; license = licenses.gpl2; maintainers = [ maintainers.rick68 ]; - platforms = platforms.linux; + platforms = filter (p: p != "aarch64-linux") platforms.linux; }; } diff --git a/pkgs/servers/softether/4.25.nix b/pkgs/servers/softether/4.25.nix index b1e9c5c1a455..04053174f4e4 100644 --- a/pkgs/servers/softether/4.25.nix +++ b/pkgs/servers/softether/4.25.nix @@ -1,5 +1,6 @@ { stdenv, fetchurl -, openssl, readline, ncurses, zlib }: +, openssl, readline, ncurses, zlib +, dataDir ? "/var/lib/softether" }: let os = if stdenv.isLinux then "1" @@ -17,7 +18,6 @@ stdenv.mkDerivation rec { version = "4.25"; build = "9656"; compiledDate = "2018.01.15"; - dataDir = "/var/lib/softether"; src = fetchurl { url = "http://www.softether-download.com/files/softether/v${version}-${build}-rtm-${compiledDate}-tree/Source_Code/softether-src-v${version}-${build}-rtm.tar.gz"; @@ -48,6 +48,6 @@ stdenv.mkDerivation rec { homepage = https://www.softether.org/; license = licenses.gpl2; maintainers = [ maintainers.rick68 ]; - platforms = platforms.linux; + platforms = filter (p: p != "aarch64-linux") platforms.linux; }; } diff --git a/pkgs/servers/sql/cockroachdb/default.nix b/pkgs/servers/sql/cockroachdb/default.nix index e97b483fa062..f40a5df0f5c0 100644 --- a/pkgs/servers/sql/cockroachdb/default.nix +++ b/pkgs/servers/sql/cockroachdb/default.nix @@ -2,13 +2,13 @@ buildGoPackage rec { name = "cockroach-${version}"; - version = "1.1.2"; + version = "1.1.5"; goPackagePath = "github.com/cockroachdb/cockroach"; src = fetchurl { url = "https://binaries.cockroachdb.com/cockroach-v${version}.src.tgz"; - sha256 = "0h1fijzihp85a18flq4brdc3b38gj867kfkp31gncnmff0xb8kam"; + sha256 = "0i2lg60424i1yg9dhapfsy3majnlbad2wlf93d9l161jf5lp9a2d"; }; nativeBuildInputs = [ cmake xz which autoconf ]; diff --git a/pkgs/servers/sql/mysql/jdbc/default.nix b/pkgs/servers/sql/mysql/jdbc/default.nix index 046eb6cfca98..7125f9ef8e96 100644 --- a/pkgs/servers/sql/mysql/jdbc/default.nix +++ b/pkgs/servers/sql/mysql/jdbc/default.nix @@ -1,12 +1,12 @@ {stdenv, fetchurl, ant, unzip}: stdenv.mkDerivation rec { - name = "mysql-connector-java-5.1.39"; + name = "mysql-connector-java-5.1.45"; builder = ./builder.sh; src = fetchurl { url = "http://dev.mysql.com/get/Downloads/Connector-J/${name}.zip"; - sha256 = "0d0g51hfx7a2r6nbni8yramg4vpqk0sql0aaib6q576a0nnrq78r"; + sha256 = "1x3dygygj15p7zk825mqr0g80wlm3rfsqgbqnb11l133rk4s1ylw"; }; buildInputs = [ unzip ant ]; diff --git a/pkgs/servers/teleport/default.nix b/pkgs/servers/teleport/default.nix index 0c6a197b1da5..0f08d94a052f 100644 --- a/pkgs/servers/teleport/default.nix +++ b/pkgs/servers/teleport/default.nix @@ -3,14 +3,14 @@ buildGoPackage rec { name = "teleport-${version}"; - version = "2.4.0"; + version = "2.4.1"; # This repo has a private submodule "e" which fetchgit cannot handle without failing. src = fetchFromGitHub { owner = "gravitational"; repo = "teleport"; rev = "v${version}"; - sha256 = "1x4xnqjyb87pzmn2c59fwmzfx1f2k0xhqn2xgki3722qmj2ss846"; + sha256 = "09kmlihv4aqc39f9cyv2vm0kqgdf9vmdrgds5krnzqdgy3svyg7y"; }; goPackagePath = "github.com/gravitational/teleport"; diff --git a/pkgs/servers/traefik/default.nix b/pkgs/servers/traefik/default.nix index 72f5d3aa9d87..d38405688fc5 100644 --- a/pkgs/servers/traefik/default.nix +++ b/pkgs/servers/traefik/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { name = "traefik-${version}"; - version = "1.5.0"; + version = "1.5.2"; goPackagePath = "github.com/containous/traefik"; @@ -10,7 +10,7 @@ buildGoPackage rec { owner = "containous"; repo = "traefik"; rev = "v${version}"; - sha256 = "0yvmw99knjdfgaa3snk4fmrbf3bqnj78ix5hr0mcqj5pwjx1dihb"; + sha256 = "0cv05nm7jj1g2630l5zmzpmsrjx712ba3l7klh8nqs02mzykzsha"; }; buildInputs = [ go-bindata bash ]; diff --git a/pkgs/servers/tvheadend/default.nix b/pkgs/servers/tvheadend/default.nix index d8cfadbfab2f..c5e2b45fe96d 100644 --- a/pkgs/servers/tvheadend/default.nix +++ b/pkgs/servers/tvheadend/default.nix @@ -3,7 +3,7 @@ , which, zlib }: let - version = "4.2.4"; + version = "4.2.5"; in stdenv.mkDerivation rec { name = "tvheadend-${version}"; @@ -12,7 +12,7 @@ in stdenv.mkDerivation rec { owner = "tvheadend"; repo = "tvheadend"; rev = "v${version}"; - sha256 = "1kydjmgv0nrllgi2s6aczq4x9ag01c8qm8w962qb52fzdfw7fs6k"; + sha256 = "199b0xm4lfdspmrirvzzg511yh358awciz23zmccvlvq86b548pz"; }; buildInputs = [ diff --git a/pkgs/servers/uftp/default.nix b/pkgs/servers/uftp/default.nix index 102868c0d46c..40bcbc50f0ca 100644 --- a/pkgs/servers/uftp/default.nix +++ b/pkgs/servers/uftp/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "uftp-${version}"; - version = "4.9.4"; + version = "4.9.5"; src = fetchurl { url = "mirror://sourceforge/uftp-multicast/source-tar/uftp-${version}.tar.gz"; - sha256 = "1npfl7n1w2l0j6c6iizw1szzq0lz9wy6jb55qmwhfkzwj0zd7mqp"; + sha256 = "1alsha0mhscp0jha2wlb5mqqkx2967s7rpm0x8c2v7jws1d0m1w3"; }; buildInputs = [ openssl ]; diff --git a/pkgs/servers/uwsgi/default.nix b/pkgs/servers/uwsgi/default.nix index 4614a9768b05..b420c673850b 100644 --- a/pkgs/servers/uwsgi/default.nix +++ b/pkgs/servers/uwsgi/default.nix @@ -49,11 +49,11 @@ in stdenv.mkDerivation rec { name = "uwsgi-${version}"; - version = "2.0.15"; + version = "2.0.16"; src = fetchurl { url = "http://projects.unbit.it/downloads/${name}.tar.gz"; - sha256 = "1zvj28wp3c1hacpd4c6ra5ilwvvfq3l8y6gn8i7mnncpddlzjbjp"; + sha256 = "1x61vipgzhzb6flbbgl0hq96j9d330gh0kmwv8pwh6n57j7z84d9"; }; nativeBuildInputs = [ python3 pkgconfig ]; diff --git a/pkgs/servers/varnish/modules.nix b/pkgs/servers/varnish/modules.nix index 8327b2ca5166..8fdcf63e5b9a 100644 --- a/pkgs/servers/varnish/modules.nix +++ b/pkgs/servers/varnish/modules.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, pkgconfig, varnish, python, docutils, removeReferencesTo }: stdenv.mkDerivation rec { - version = "0.10.2"; + version = "0.13.0"; name = "varnish-modules-${version}"; src = fetchurl { url = "https://download.varnish-software.com/varnish-modules/varnish-modules-${version}.tar.gz"; - sha256 = "0inw76pm8kcidh0lq7gm3c3bh8v6yps0z7j6ar617b8wf730w1im"; + sha256 = "1nj52va7cp0swcv87zd3si80knpaa4a7na37cy9wkvgyvhf9k8mh"; }; nativeBuildInputs = [ pkgconfig docutils removeReferencesTo ]; diff --git a/pkgs/servers/web-apps/piwik/bootstrap.php b/pkgs/servers/web-apps/matomo/bootstrap.php similarity index 100% rename from pkgs/servers/web-apps/piwik/bootstrap.php rename to pkgs/servers/web-apps/matomo/bootstrap.php diff --git a/pkgs/servers/web-apps/matomo/default.nix b/pkgs/servers/web-apps/matomo/default.nix new file mode 100644 index 000000000000..c99b20a46bd5 --- /dev/null +++ b/pkgs/servers/web-apps/matomo/default.nix @@ -0,0 +1,59 @@ +{ stdenv, fetchurl, makeWrapper, php }: + +stdenv.mkDerivation rec { + name = "matomo-${version}"; + version = "3.3.0"; + + src = fetchurl { + # TODO: As soon as the tarballs are renamed as well on future releases, this should be enabled again + # url = "https://builds.matomo.org/${name}.tar.gz"; + url = "https://builds.matomo.org/piwik-${version}.tar.gz"; + sha256 = "1ybzj3kk0x29nv8c6xnhir5d9dr0q0fl1vnm4i7zvhml73ryqk0f"; + }; + + nativeBuildInputs = [ makeWrapper ]; + + # make-localhost-default-database-server.patch: + # This changes the default value of the database server field + # from 127.0.0.1 to localhost. + # unix socket authentication only works with localhost, + # but password-based SQL authentication works with both. + # TODO: is upstream interested in this? + patches = [ ./make-localhost-default-database-host.patch ]; + + # this bootstrap.php adds support for getting PIWIK_USER_PATH + # from an environment variable. Point it to a mutable location + # to be able to use matomo read-only from the nix store + postPatch = '' + cp ${./bootstrap.php} bootstrap.php + ''; + + # TODO: future versions might rename the PIWIK_… variables to MATOMO_… + # TODO: Move more unnecessary files from share/, especially using PIWIK_INCLUDE_PATH. + # See https://forum.matomo.org/t/bootstrap-php/5926/10 and + # https://github.com/matomo-org/matomo/issues/11654#issuecomment-297730843 + installPhase = '' + runHook preInstall + + # copy evertything to share/, used as webroot folder, and then remove what's known to be not needed + mkdir -p $out/share + cp -ra * $out/share/ + # tmp/ is created by matomo in PIWIK_USER_PATH + rmdir $out/share/tmp + # config/ needs to be copied to PIWIK_USER_PATH anyway + mv $out/share/config $out/ + + makeWrapper ${php}/bin/php $out/bin/matomo-console \ + --add-flags "$out/share/console" + + runHook postInstall + ''; + + meta = with stdenv.lib; { + description = "A real-time web analytics application"; + license = licenses.gpl3Plus; + homepage = https://matomo.org/; + platforms = platforms.all; + maintainers = [ maintainers.florianjacob ]; + }; +} diff --git a/pkgs/servers/web-apps/matomo/make-localhost-default-database-host.patch b/pkgs/servers/web-apps/matomo/make-localhost-default-database-host.patch new file mode 100644 index 000000000000..48808ac2ccca --- /dev/null +++ b/pkgs/servers/web-apps/matomo/make-localhost-default-database-host.patch @@ -0,0 +1,13 @@ +diff --git a/plugins/Installation/FormDatabaseSetup.php b/plugins/Installation/FormDatabaseSetup.php +index 9364f49870..2625cbb91b 100644 +--- a/plugins/Installation/FormDatabaseSetup.php ++++ b/plugins/Installation/FormDatabaseSetup.php +@@ -82,7 +82,7 @@ class FormDatabaseSetup extends QuickForm2 + + // default values + $this->addDataSource(new HTML_QuickForm2_DataSource_Array(array( +- 'host' => '127.0.0.1', ++ 'host' => 'localhost', + 'type' => $defaultDatabaseType, + 'tables_prefix' => 'matomo_', + ))); diff --git a/pkgs/servers/web-apps/piwik/default.nix b/pkgs/servers/web-apps/piwik/default.nix deleted file mode 100644 index 697240e81c75..000000000000 --- a/pkgs/servers/web-apps/piwik/default.nix +++ /dev/null @@ -1,51 +0,0 @@ -{ stdenv, fetchurl, makeWrapper, php }: - -stdenv.mkDerivation rec { - name = "piwik-${version}"; - version = "3.2.1"; - - src = fetchurl { - url = "https://builds.piwik.org/${name}.tar.gz"; - sha512 = "1yisgywz7dm6kygh9mc207xnqpvdxbw4pa2l9gjh495a6979x3chi7z5rf410z4dmrg0kbj8wqm8mmmslfn276xvw37l2d4h73ij1h2"; - }; - - nativeBuildInputs = [ makeWrapper ]; - - # regarding the 127.0.0.1 substitute: - # This replaces the default value of the database server field. - # unix socket authentication only works with localhost, - # but password-based SQL authentication works with both. - postPatch = '' - substituteInPlace plugins/Installation/FormDatabaseSetup.php \ - --replace "=> '127.0.0.1'," "=> 'localhost'," - cp ${./bootstrap.php} bootstrap.php - ''; - - # TODO: Move more unnecessary files from share/, especially using PIWIK_INCLUDE_PATH. - # See https://forum.piwik.org/t/bootstrap-php/5926/10 and - # https://github.com/piwik/piwik/issues/11654#issuecomment-297730843 - installPhase = '' - runHook preInstall - - # copy evertything to share/, used as webroot folder, and then remove what's known to be not needed - mkdir -p $out/share - cp -ra * $out/share/ - # tmp/ is created by piwik in PIWIK_USER_PATH - rmdir $out/share/tmp - # config/ needs to be copied to PIWIK_USER_PATH anyway - mv $out/share/config $out/ - - makeWrapper ${php}/bin/php $out/bin/piwik-console \ - --add-flags "$out/share/console" - - runHook postInstall - ''; - - meta = with stdenv.lib; { - description = "A real-time web analytics application"; - license = licenses.gpl3Plus; - homepage = https://piwik.org/; - platforms = platforms.all; - maintainers = [ maintainers.florianjacob ]; - }; -} diff --git a/pkgs/servers/web-apps/pump.io/composition.nix b/pkgs/servers/web-apps/pump.io/composition.nix index ee4dab5ad64a..da8cc0e73b13 100644 --- a/pkgs/servers/web-apps/pump.io/composition.nix +++ b/pkgs/servers/web-apps/pump.io/composition.nix @@ -2,7 +2,7 @@ {pkgs ? import { inherit system; - }, system ? builtins.currentSystem, nodejs ? pkgs."nodejs-4_x"}: + }, system ? builtins.currentSystem, nodejs ? pkgs."nodejs-6_x"}: let nodeEnv = import ../../../development/node-packages/node-env.nix { @@ -13,4 +13,4 @@ in import ./node-packages.nix { inherit (pkgs) fetchurl fetchgit; inherit nodeEnv; -} \ No newline at end of file +} diff --git a/pkgs/servers/web-apps/shaarli/default.nix b/pkgs/servers/web-apps/shaarli/default.nix index a74221cfbd33..4c4cd21cddf4 100644 --- a/pkgs/servers/web-apps/shaarli/default.nix +++ b/pkgs/servers/web-apps/shaarli/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "shaarli-${version}"; - version = "0.9.2"; + version = "0.9.5"; src = fetchurl { url = "https://github.com/shaarli/Shaarli/releases/download/v${version}/shaarli-v${version}-full.tar.gz"; - sha256 = "07wn5pg7pkya8d4k2khp2jyvkdkmm5431fj1k0m1i5k65yyvfqzr"; + sha256 = "133ffxyw9bf61rky01d3rkkm34np5z4kwmgwx6ygshl83y0ylnwf"; }; outputs = [ "out" "doc" ]; diff --git a/pkgs/servers/web-apps/wallabag/default.nix b/pkgs/servers/web-apps/wallabag/default.nix index 07b530f4ef72..c0d5876a3a2d 100644 --- a/pkgs/servers/web-apps/wallabag/default.nix +++ b/pkgs/servers/web-apps/wallabag/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "wallabag-${version}"; - version = "2.3.1"; + version = "2.3.2"; # remember to rm -r var/cache/* after a rebuild or unexpected errors will occur src = fetchurl { url = "https://static.wallabag.org/releases/wallabag-release-${version}.tar.gz"; - sha256 = "1qk7jicni5g8acpjybrwnwf7zknk3b0mxiv5876lrsajcxdxwnf4"; + sha256 = "17yczdvgl43j6wa7hksxi2b51afvyd56vdya6hbbv68iiba4jyh4"; }; outputs = [ "out" ]; diff --git a/pkgs/servers/x11/xorg/default.nix b/pkgs/servers/x11/xorg/default.nix index cc2cade8ba13..d22565ae8db9 100644 --- a/pkgs/servers/x11/xorg/default.nix +++ b/pkgs/servers/x11/xorg/default.nix @@ -1,6 +1,6 @@ # THIS IS A GENERATED FILE. DO NOT EDIT! args @ { clangStdenv, fetchurl, fetchgit, fetchpatch, stdenv, pkgconfig, intltool, freetype, fontconfig -, libxslt, expat, libpng, zlib, perl, mesa_drivers, spice_protocol +, libxslt, expat, libpng, zlib, perl, mesa_drivers, spice-protocol , dbus, libuuid, openssl, gperf, m4, libevdev, tradcpp, libinput, mcpp, makeWrapper, autoreconfHook , autoconf, automake, libtool, xmlto, asciidoc, flex, bison, python, mtdev, pixman, ... }: with args; diff --git a/pkgs/servers/x11/xorg/generate-expr-from-tarballs.pl b/pkgs/servers/x11/xorg/generate-expr-from-tarballs.pl index 1f3557dff66e..acf234a1683e 100755 --- a/pkgs/servers/x11/xorg/generate-expr-from-tarballs.pl +++ b/pkgs/servers/x11/xorg/generate-expr-from-tarballs.pl @@ -230,7 +230,7 @@ print OUT ""; print OUT <rocksdb_perf) { + rocksdb::SetPerfLevel(rocksdb::PerfLevel::kEnableTimeExceptForMutex); +- rocksdb::perf_context.Reset(); ++ rocksdb::get_perf_context()->Reset(); + } + + RocksDBTransactionImpl * _t = +@@ -532,13 +532,13 @@ + utime_t write_wal_time; + utime_t write_pre_and_post_process_time; + write_wal_time.set_from_double( +- static_cast(rocksdb::perf_context.write_wal_time)/1000000000); ++ static_cast(rocksdb::get_perf_context()->write_wal_time)/1000000000); + write_memtable_time.set_from_double( +- static_cast(rocksdb::perf_context.write_memtable_time)/1000000000); ++ static_cast(rocksdb::get_perf_context()->write_memtable_time)/1000000000); + write_delay_time.set_from_double( +- static_cast(rocksdb::perf_context.write_delay_time)/1000000000); ++ static_cast(rocksdb::get_perf_context()->write_delay_time)/1000000000); + write_pre_and_post_process_time.set_from_double( +- static_cast(rocksdb::perf_context.write_pre_and_post_process_time)/1000000000); ++ static_cast(rocksdb::get_perf_context()->write_pre_and_post_process_time)/1000000000); + logger->tinc(l_rocksdb_write_memtable_time, write_memtable_time); + logger->tinc(l_rocksdb_write_delay_time, write_delay_time); + logger->tinc(l_rocksdb_write_wal_time, write_wal_time); +@@ -558,7 +558,7 @@ + // considering performance overhead, default is disabled + if (g_conf->rocksdb_perf) { + rocksdb::SetPerfLevel(rocksdb::PerfLevel::kEnableTimeExceptForMutex); +- rocksdb::perf_context.Reset(); ++ rocksdb::get_perf_context()->Reset(); + } + + RocksDBTransactionImpl * _t = +@@ -586,13 +586,13 @@ + utime_t write_wal_time; + utime_t write_pre_and_post_process_time; + write_wal_time.set_from_double( +- static_cast(rocksdb::perf_context.write_wal_time)/1000000000); ++ static_cast(rocksdb::get_perf_context()->write_wal_time)/1000000000); + write_memtable_time.set_from_double( +- static_cast(rocksdb::perf_context.write_memtable_time)/1000000000); ++ static_cast(rocksdb::get_perf_context()->write_memtable_time)/1000000000); + write_delay_time.set_from_double( +- static_cast(rocksdb::perf_context.write_delay_time)/1000000000); ++ static_cast(rocksdb::get_perf_context()->write_delay_time)/1000000000); + write_pre_and_post_process_time.set_from_double( +- static_cast(rocksdb::perf_context.write_pre_and_post_process_time)/1000000000); ++ static_cast(rocksdb::get_perf_context()->write_pre_and_post_process_time)/1000000000); + logger->tinc(l_rocksdb_write_memtable_time, write_memtable_time); + logger->tinc(l_rocksdb_write_delay_time, write_delay_time); + logger->tinc(l_rocksdb_write_wal_time, write_wal_time); diff --git a/pkgs/tools/filesystems/ceph/0002-fix-absolute-include-path.patch b/pkgs/tools/filesystems/ceph/0002-fix-absolute-include-path.patch new file mode 100644 index 000000000000..01aa194dddf2 --- /dev/null +++ b/pkgs/tools/filesystems/ceph/0002-fix-absolute-include-path.patch @@ -0,0 +1,19 @@ +diff -ru ceph/src/key_value_store/kv_flat_btree_async.cc ceph-copy/src/key_value_store/kv_flat_btree_async.cc +--- ceph/src/key_value_store/kv_flat_btree_async.cc 1980-01-02 00:00:00.000000000 +0100 ++++ ceph-copy/src/key_value_store/kv_flat_btree_async.cc 2018-02-13 21:49:59.232860487 +0100 +@@ -15,13 +15,13 @@ + #include "key_value_store/kv_flat_btree_async.h" + #include "key_value_store/kvs_arg_types.h" + #include "include/rados/librados.hpp" +-#include "/usr/include/asm-generic/errno.h" +-#include "/usr/include/asm-generic/errno-base.h" + #include "common/ceph_context.h" + #include "common/Clock.h" + #include "include/types.h" + + ++#include ++#include + #include + #include + #include diff --git a/pkgs/tools/filesystems/ceph/default.nix b/pkgs/tools/filesystems/ceph/default.nix index 334525e79026..0f712853f24a 100644 --- a/pkgs/tools/filesystems/ceph/default.nix +++ b/pkgs/tools/filesystems/ceph/default.nix @@ -1,20 +1,12 @@ { callPackage, fetchgit, fetchpatch, ... } @ args: callPackage ./generic.nix (args // rec { - version = "9.2.0"; + version = "12.2.2"; src = fetchgit { url = "https://github.com/ceph/ceph.git"; rev = "refs/tags/v${version}"; - sha256 = "0a2v3bgkrbkzardcw7ymlhhyjlwi08qmcm7g34y2sjsxk9bd78an"; + sha256 = "01anqxyffa8l2lzgyb0dj6fjicfjdx2cq9y1klh24x69gxwkdh00"; }; - patches = [ - ./fix-pythonpath.patch - # For building with xfsprogs 4.5.0: - (fetchpatch { - url = "https://github.com/ceph/ceph/commit/602425abd5cef741fc1b5d4d1dd70c68e153fc8d.patch"; - sha256 = "1iyf0ml2n50ki800vjich8lvzmcdviwqwkbs6cdj0vqv2nc5ii1g"; - }) - ]; }) diff --git a/pkgs/tools/filesystems/ceph/generic.nix b/pkgs/tools/filesystems/ceph/generic.nix index ffcf20d1651b..32b85eaa6815 100644 --- a/pkgs/tools/filesystems/ceph/generic.nix +++ b/pkgs/tools/filesystems/ceph/generic.nix @@ -1,12 +1,17 @@ -{ stdenv, ensureNewerSourcesHook, autoconf, automake, makeWrapper, pkgconfig -, libtool, which, git -, boost, python2Packages, libxml2, zlib +{ stdenv, ensureNewerSourcesHook, cmake, pkgconfig +, which, git +, boost, python2Packages +, libxml2, zlib +, openldap, lttngUst +, babeltrace, gperf +, cunit, snappy +, rocksdb # Optional Dependencies -, snappy ? null, leveldb ? null, yasm ? null, fcgi ? null, expat ? null +, yasm ? null, fcgi ? null, expat ? null , curl ? null, fuse ? null, libibverbs ? null, librdmacm ? null , libedit ? null, libatomic_ops ? null, kinetic-cpp-client ? null -, rocksdb ? null, libs3 ? null +, libs3 ? null # Mallocs , jemalloc ? null, gperftools ? null @@ -30,21 +35,11 @@ assert cryptopp != null || (nss != null && nspr != null); with stdenv; with stdenv.lib; let - inherit (python2Packages) python; - mkFlag = trueStr: falseStr: cond: name: val: "--" - + (if cond then trueStr else falseStr) - + name - + optionalString (val != null && cond != false) "=${val}"; - mkEnable = mkFlag "enable-" "disable-"; - mkWith = mkFlag "with-" "without-"; - mkOther = mkFlag "" "" true; shouldUsePkg = pkg_: let pkg = (builtins.tryEval pkg_).value; in if lib.any (x: x == system) (pkg.meta.platforms or []) then pkg else null; - optSnappy = shouldUsePkg snappy; - optLeveldb = shouldUsePkg leveldb; optYasm = shouldUsePkg yasm; optFcgi = shouldUsePkg fcgi; optExpat = shouldUsePkg expat; @@ -55,7 +50,6 @@ let optLibedit = shouldUsePkg libedit; optLibatomic_ops = shouldUsePkg libatomic_ops; optKinetic-cpp-client = shouldUsePkg kinetic-cpp-client; - optRocksdb = shouldUsePkg rocksdb; optLibs3 = if versionAtLeast version "10.0.0" then null else shouldUsePkg libs3; optJemalloc = shouldUsePkg jemalloc; @@ -69,13 +63,11 @@ let optLibxfs = shouldUsePkg libxfs; optZfs = shouldUsePkg zfs; - hasServer = optSnappy != null && optLeveldb != null; - hasMon = hasServer; - hasMds = hasServer; - hasOsd = hasServer; + hasMon = true; + hasMds = true; + hasOsd = true; hasRadosgw = optFcgi != null && optExpat != null && optCurl != null && optLibedit != null; - hasRocksdb = versionAtLeast version "9.0.0" && optRocksdb != null; # TODO: Reenable when kinetic support is fixed #hasKinetic = versionAtLeast version "9.0.0" && optKinetic-cpp-client != null; @@ -93,192 +85,92 @@ let none = [ ]; }; - wrapArgs = "--set PYTHONPATH \"$(toPythonPath $lib)\"" - + " --prefix PYTHONPATH : \"$(toPythonPath ${python2Packages.flask})\"" - + " --set PATH \"$out/bin\""; + ceph-python-env = python2Packages.python.withPackages (ps: [ + ps.sphinx + ps.flask + ps.argparse + ps.cython + ps.setuptools + ps.pip + # Libraries needed by the python tools + ps.Mako + ps.pecan + ps.prettytable + ps.webob + ]); + in stdenv.mkDerivation { name="ceph-${version}"; inherit src; - patches = patches ++ [ - ./0001-Makefile-env-Don-t-force-sbin.patch + patches = [ + # ./ceph-patch-cmake-path.patch + ./0001-kv-RocksDBStore-API-break-additional.patch + ] ++ optionals stdenv.isLinux [ + ./0002-fix-absolute-include-path.patch ]; nativeBuildInputs = [ - autoconf automake makeWrapper pkgconfig libtool which git + cmake + pkgconfig which git python2Packages.wrapPython (ensureNewerSourcesHook { year = "1980"; }) - ] - ++ optionals (versionAtLeast version "9.0.2") [ - python2Packages.setuptools python2Packages.argparse - ]; + ]; + buildInputs = buildInputs ++ cryptoLibsMap.${cryptoStr} ++ [ - boost python libxml2 optYasm optLibatomic_ops optLibs3 malloc python2Packages.flask zlib - ] ++ optionals (versionAtLeast version "9.0.0") [ - python2Packages.sphinx # Used for docs + boost ceph-python-env libxml2 optYasm optLibatomic_ops optLibs3 + malloc zlib openldap lttngUst babeltrace gperf cunit + snappy rocksdb ] ++ optionals stdenv.isLinux [ linuxHeaders libuuid udev keyutils optLibaio optLibxfs optZfs - ] ++ optionals hasServer [ - optSnappy optLeveldb ] ++ optionals hasRadosgw [ optFcgi optExpat optCurl optFuse optLibedit - ] ++ optionals hasRocksdb [ - optRocksdb ] ++ optionals hasKinetic [ optKinetic-cpp-client ]; - postPatch = '' - # Fix zfs pkgconfig detection - sed -i 's,\[zfs\],\[libzfs\],g' configure.ac - - # Fix seagate kinetic linking - sed -i 's,libcrypto.a,-lcrypto,g' src/os/Makefile.am - '' + optionalString (versionAtLeast version "9.0.0") '' - # Fix gmock - patchShebangs src/gmock + + preConfigure ='' + # rip off submodule that interfer with system libs + rm -rf src/boost + rm -rf src/rocksdb + + # require LD_LIBRARY_PATH for cython to find internal dep + export LD_LIBRARY_PATH="$PWD/build/lib:$LD_LIBRARY_PATH" + + # requires setuptools due to embedded in-cmake setup.py usage + export PYTHONPATH="${python2Packages.setuptools}/lib/python2.7/site-packages/:$PYTHONPATH" ''; - preConfigure = '' - # Ceph expects the arch command to be usable during configure - # for detecting the assembly type - mkdir -p mybin - echo "#${stdenv.shell} -e" >> mybin/arch - echo "uname -m" >> mybin/arch - chmod +x mybin/arch - PATH="$PATH:$(pwd)/mybin" - - ./autogen.sh - - # Fix the python site-packages install directory - sed -i "s,\(PYTHON\(\|_EXEC\)_PREFIX=\).*,\1'$lib',g" configure - - # Fix the PYTHONPATH for installing ceph-detect-init to $out - mkdir -p "$(toPythonPath $out)" - export PYTHONPATH="$(toPythonPath $out):$PYTHONPATH" - ''; - - configureFlags = [ - (mkOther "exec_prefix" "\${out}") - (mkOther "sysconfdir" "/etc") - (mkOther "localstatedir" "/var") - (mkOther "libdir" "\${lib}/lib") - (mkOther "includedir" "\${lib}/include") - (mkWith true "rbd" null) - (mkWith true "cephfs" null) - (mkWith hasRadosgw "radosgw" null) - (mkWith true "radosstriper" null) - (mkWith hasServer "mon" null) - (mkWith hasServer "osd" null) - (mkWith hasServer "mds" null) - (mkEnable true "client" null) - (mkEnable hasServer "server" null) - (mkWith (cryptoStr == "cryptopp") "cryptopp" null) - (mkWith (cryptoStr == "nss") "nss" null) - (mkEnable false "root-make-check" null) - (mkWith false "profiler" null) - (mkWith false "debug" null) - (mkEnable false "coverage" null) - (mkWith (optFuse != null) "fuse" null) - (mkWith (malloc == optJemalloc) "jemalloc" null) - (mkWith (malloc == optGperftools) "tcmalloc" null) - (mkEnable false "pgrefdebugging" null) - (mkEnable false "cephfs-java" null) - (mkWith (optLibatomic_ops != null) "libatomic-ops" null) - (mkWith true "ocf" null) - (mkWith hasKinetic "kinetic" null) - (mkWith hasRocksdb "librocksdb" null) - (mkWith false "librocksdb-static" null) - ] ++ optional stdenv.isLinux [ - (mkWith (optLibaio != null) "libaio" null) - (mkWith (optLibxfs != null) "libxfs" null) - (mkWith (optZfs != null) "libzfs" null) - ] ++ optional (versionAtLeast version "0.94.3") [ - (mkWith false "tcmalloc-minimal" null) - ] ++ optional (versionAtLeast version "9.0.1") [ - (mkWith false "valgrind" null) - ] ++ optional (versionAtLeast version "9.0.2") [ - (mkWith true "man-pages" null) - (mkWith true "systemd-libexec-dir" "\${out}/libexec") - ] ++ optional (versionOlder version "9.1.0") [ - (mkWith (optLibs3 != null) "system-libs3" null) - (mkWith true "rest-bench" null) - ] ++ optional (versionAtLeast version "9.1.0") [ - (mkWith true "rgw-user" "rgw") - (mkWith true "rgw-group" "rgw") - (mkWith true "systemd-unit-dir" "\${out}/etc/systemd/system") - (mkWith false "selinux" null) # TODO: Implement + cmakeFlags = [ + "-DENABLE_GIT_VERSION=OFF" + "-DWITH_SYSTEM_BOOST=ON" + "-DWITH_SYSTEM_ROCKSDB=ON" + "-DWITH_LEVELDB=OFF" + + # enforce shared lib + "-DBUILD_SHARED_LIBS=ON" + + # disable cephfs, cmake build broken for now + "-DWITH_CEPHFS=OFF" + "-DWITH_LIBCEPHFS=OFF" ]; - preBuild = optionalString (versionAtLeast version "9.0.0") '' - (cd src/gmock; make -j $NIX_BUILD_CORES) - ''; - - installFlags = [ "sysconfdir=\${out}/etc" ]; - - outputs = [ "out" "lib" ]; - - postInstall = '' - # Wrap all of the python scripts - wrapProgram $out/bin/ceph ${wrapArgs} - wrapProgram $out/bin/ceph-brag ${wrapArgs} - wrapProgram $out/bin/ceph-rest-api ${wrapArgs} - wrapProgram $out/sbin/ceph-create-keys ${wrapArgs} - wrapProgram $out/sbin/ceph-disk ${wrapArgs} - - # Bring in lib as a run-time dependency - mkdir -p $out/nix-support - echo "$lib" > $out/nix-support/propagated-build-inputs - - # Fix the python library loading - find $lib/lib -name \*.pyc -or -name \*.pyd -exec rm {} \; - for PY in $(find $lib/lib -name \*.py); do - LIBS="$(sed -n "s/.*find_library('\([^)]*\)').*/\1/p" "$PY")" - - # Delete any calls to find_library - sed -i '/find_library/d' "$PY" - - # Fix each find_library call - for LIB in $LIBS; do - REALLIB="$lib/lib/lib$LIB.so" - sed -i "s,\(lib$LIB = CDLL(\).*,\1'$REALLIB'),g" "$PY" - done - - # Reapply compilation optimizations - NAME=$(basename -s .py "$PY") - rm -f "$PY"{c,o} - pushd "$(dirname $PY)" - python -c "import $NAME" - python -O -c "import $NAME" - popd - test -f "$PY"c - test -f "$PY"o - done - - # Fix .la file link dependencies - find "$lib/lib" -name \*.la | xargs sed -i \ - -e 's,-lboost_[a-z]*,-L${boost.out}/lib \0,g' \ - '' + optionalString (cryptoStr == "cryptopp") '' - -e 's,-lcryptopp,-L${optCryptopp}/lib \0,g' \ - '' + optionalString (cryptoStr == "nss") '' - -e 's,-l\(plds4\|plc4\|nspr4\),-L${optNss}/lib \0,g' \ - -e 's,-l\(ssl3\|smime3\|nss3\|nssutil3\),-L${optNspr}/lib \0,g' \ - '' + '' - + postFixup = '' + wrapPythonPrograms ''; enableParallelBuilding = true; + + outputs = [ "dev" "lib" "out" "doc" ]; meta = { homepage = http://ceph.com/; description = "Distributed storage system"; license = licenses.lgpl21; - maintainers = with maintainers; [ ak wkennington ]; + maintainers = with maintainers; [ adev ak wkennington ]; platforms = platforms.unix; - # Broken because of https://lwn.net/Vulnerabilities/709844/ - # and our version is quite out of date. - broken = true; }; passthru.version = version; diff --git a/pkgs/tools/filesystems/encfs/default.nix b/pkgs/tools/filesystems/encfs/default.nix index e415f57e707e..03da84f7c733 100644 --- a/pkgs/tools/filesystems/encfs/default.nix +++ b/pkgs/tools/filesystems/encfs/default.nix @@ -5,10 +5,10 @@ stdenv.mkDerivation rec { name = "encfs-${version}"; - version = "1.9.2"; + version = "1.9.4"; src = fetchFromGitHub { - sha256 = "0isx7n4r8znk02464s0wvlzk6ry5mlnq3kgnd0rapnhjwdvwqr5y"; + sha256 = "1hp2l4yk7fsimlrrd6a675vigmyikd323l1n3mybcdng58skj2ag"; rev = "v${version}"; repo = "encfs"; owner = "vgough"; diff --git a/pkgs/tools/filesystems/hubicfuse/default.nix b/pkgs/tools/filesystems/hubicfuse/default.nix index e9d3df026b08..4594aa9370ca 100644 --- a/pkgs/tools/filesystems/hubicfuse/default.nix +++ b/pkgs/tools/filesystems/hubicfuse/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "hubicfuse-${version}"; - version = "3.0.0"; + version = "3.0.1"; src = fetchFromGitHub { owner = "TurboGit"; repo = "hubicfuse"; rev = "v${version}"; - sha256 = "1y4n63bk9vd6n1l5psjb9xm9h042kw4yh2ni33z7agixkanajv1s"; + sha256 = "1x988hfffxgvqxh083pv3lj5031fz03sbgiiwrjpaiywfbhm8ffr"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/tools/filesystems/securefs/default.nix b/pkgs/tools/filesystems/securefs/default.nix index 233034792e15..6fc7ba6499ea 100644 --- a/pkgs/tools/filesystems/securefs/default.nix +++ b/pkgs/tools/filesystems/securefs/default.nix @@ -4,10 +4,10 @@ stdenv.mkDerivation rec { name = "securefs-${version}"; - version = "0.3.2"; + version = "0.8.1"; src = fetchFromGitHub { - sha256 = "1drksvwfgfpgcn2mzb65ljqlg2kgn6nald9fnz60hliw8f1wiqvh"; + sha256 = "065n3mskv0b2dlk9w4b3pa70h5ymrnanydbanwyx74mf7n8c80r2"; rev = version; repo = "securefs"; owner = "netheril96"; diff --git a/pkgs/tools/filesystems/zerofree/default.nix b/pkgs/tools/filesystems/zerofree/default.nix index 593715b2068d..3283d6789f73 100644 --- a/pkgs/tools/filesystems/zerofree/default.nix +++ b/pkgs/tools/filesystems/zerofree/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "zerofree-${version}"; - version = "1.1.0"; + version = "1.1.1"; src = fetchurl { url = "http://frippery.org/uml/${name}.tgz"; - sha256 = "059g29x5r1xj6wcj4xj85l8w6qrxyl86yqbybjqqz6nxz4falxzf"; + sha256 = "0rrqfa5z103ws89vi8kfvbks1cfs74ix6n1wb6vs582vnmhwhswm"; }; buildInputs = [ e2fsprogs ]; diff --git a/pkgs/tools/graphics/cfdg/default.nix b/pkgs/tools/graphics/cfdg/default.nix index 8c53882ff1b2..a4d49edcb447 100644 --- a/pkgs/tools/graphics/cfdg/default.nix +++ b/pkgs/tools/graphics/cfdg/default.nix @@ -2,9 +2,9 @@ stdenv.mkDerivation rec { name = "cfdg-${version}"; - version = "3.0.2"; + version = "3.0.9"; src = fetchurl { - sha256 = "1pd1hjippbhad8l4s4lsglykh22i24qfrgmnxrsx71bvcqbr356p"; + sha256 = "1jqpinz6ri4a2l04mf2z1ljalkdk1m07hj47lqkh8gbf2slfs0jl"; url = "http://www.contextfreeart.org/download/ContextFreeSource${version}.tgz"; }; diff --git a/pkgs/tools/graphics/gromit-mpx/default.nix b/pkgs/tools/graphics/gromit-mpx/default.nix index 7261326633a1..dc703cf02f75 100644 --- a/pkgs/tools/graphics/gromit-mpx/default.nix +++ b/pkgs/tools/graphics/gromit-mpx/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchFromGitHub, autoreconfHook, autoconf, automake, pkgconfig , gtk, glib, pcre, libappindicator, libpthreadstubs, libXdmcp -, libxkbcommon, epoxy, at_spi2_core, dbus, libdbusmenu-glib +, libxkbcommon, epoxy, at-spi2-core, dbus, libdbusmenu-glib }: stdenv.mkDerivation rec { @@ -18,7 +18,7 @@ stdenv.mkDerivation rec { buildInputs = [ autoconf automake autoreconfHook gtk glib pcre libappindicator libpthreadstubs - libXdmcp libxkbcommon epoxy at_spi2_core + libXdmcp libxkbcommon epoxy at-spi2-core dbus libdbusmenu-glib ]; diff --git a/pkgs/tools/graphics/imgur-screenshot/default.nix b/pkgs/tools/graphics/imgur-screenshot/default.nix index 69ae03d67503..e9f1ad5dacd7 100644 --- a/pkgs/tools/graphics/imgur-screenshot/default.nix +++ b/pkgs/tools/graphics/imgur-screenshot/default.nix @@ -2,14 +2,14 @@ let deps = stdenv.lib.makeBinPath [ curl gnugrep libnotify scrot which xclip ]; in stdenv.mkDerivation rec { - version = "1.7.1"; + version = "1.7.4"; name = "imgur-screenshot-${version}"; src = fetchFromGitHub { owner = "jomo"; repo = "imgur-screenshot"; rev = "v${version}"; - sha256 = "01wiqrc7xxvk7kzgw756jahwa0szb200l8030iwfcgxb679k3v0j"; + sha256 = "1bhi9sk8v7szh2fj13qwvdwzy5dw2w4kml86sy1ns1rn0xin0cgr"; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/pkgs/tools/graphics/logstalgia/default.nix b/pkgs/tools/graphics/logstalgia/default.nix index 2f18857b2a16..5887c82af130 100644 --- a/pkgs/tools/graphics/logstalgia/default.nix +++ b/pkgs/tools/graphics/logstalgia/default.nix @@ -3,11 +3,11 @@ stdenv.mkDerivation rec { name = "logstalgia-${version}"; - version = "1.0.7"; + version = "1.1.1"; src = fetchurl { url = "https://github.com/acaudwell/Logstalgia/releases/download/${name}/${name}.tar.gz"; - sha256 = "1qghz1j3jmfj093br2hfyibayg3fmhg8fvp5ix9n9rbvzc1zslsm"; + sha256 = "0nvnk8q9m2ignzwxak0vch88blywbx4znk70xf9fg38xa4rf94yn"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/tools/graphics/oxipng/default.nix b/pkgs/tools/graphics/oxipng/default.nix index 1a2b5b19e37a..21d86f4c44b6 100644 --- a/pkgs/tools/graphics/oxipng/default.nix +++ b/pkgs/tools/graphics/oxipng/default.nix @@ -1,17 +1,17 @@ { stdenv, fetchFromGitHub, rustPlatform }: rustPlatform.buildRustPackage rec { - version = "1.0.0"; + version = "1.0.1"; name = "oxipng-${version}"; src = fetchFromGitHub { owner = "shssoichiro"; repo = "oxipng"; rev = "v${version}"; - sha256 = "1w3y9qy72sfz6zv1iizp843fd39rf1qfh7b9mllbn5w8w4hd658w"; + sha256 = "0w39f0dhq9cxk25vy0wh8vicxyckvj1vmglx5va4550i3q0hsrws"; }; - cargoSha256 = "0mj45svb0nly3cl5d1fmm7nh2zswxpgb56g9xnb4cks5186sn5fi"; + cargoSha256 = "00nbx6n73yl4ax05pqkmim1vhy0pymgz5la1cc4y18gjbjjj9w4h"; meta = with stdenv.lib; { homepage = https://github.com/shssoichiro/oxipng; diff --git a/pkgs/tools/graphics/povray/default.nix b/pkgs/tools/graphics/povray/default.nix index 42ca4cf2e270..5dfed3722e09 100644 --- a/pkgs/tools/graphics/povray/default.nix +++ b/pkgs/tools/graphics/povray/default.nix @@ -4,13 +4,13 @@ stdenv.mkDerivation rec { name = "povray-${version}"; - version = "3.7.0.4"; + version = "3.7.0.7"; src = fetchFromGitHub { owner = "POV-Ray"; repo = "povray"; rev = "v${version}"; - sha256 = "1wkwb43w5r9pa79yazy4w4s8n6g280igag97hgl7dyi289q39n0q"; + sha256 = "0gqbc4ycjfqpnixzzqxlygmargk6sm77b0k3xzff9dxdrak3xng7"; }; diff --git a/pkgs/tools/inputmethods/fcitx-engines/fcitx-rime/default.nix b/pkgs/tools/inputmethods/fcitx-engines/fcitx-rime/default.nix index e9e2e29f7fad..2bd4bf1c878c 100644 --- a/pkgs/tools/inputmethods/fcitx-engines/fcitx-rime/default.nix +++ b/pkgs/tools/inputmethods/fcitx-engines/fcitx-rime/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, cmake, pkgconfig, fcitx, librime, brise, hicolor_icon_theme }: +{ stdenv, fetchurl, cmake, pkgconfig, fcitx, librime, brise, hicolor-icon-theme }: stdenv.mkDerivation rec { name = "fcitx-rime-${version}"; @@ -9,7 +9,7 @@ stdenv.mkDerivation rec { sha256 = "0bd8snfa6jr8dhnm0s0z021iryh5pbaf7p15rhkgbigw2pssczpr"; }; - buildInputs = [ cmake pkgconfig fcitx librime brise hicolor_icon_theme ]; + buildInputs = [ cmake pkgconfig fcitx librime brise hicolor-icon-theme ]; # cmake cannont automatically find our nonstandard brise install location cmakeFlags = [ "-DRIME_DATA_DIR=${brise}/share/rime-data" ]; diff --git a/pkgs/tools/inputmethods/fcitx-engines/fcitx-table-other/default.nix b/pkgs/tools/inputmethods/fcitx-engines/fcitx-table-other/default.nix index 227e17347c1f..929cdb30b919 100644 --- a/pkgs/tools/inputmethods/fcitx-engines/fcitx-table-other/default.nix +++ b/pkgs/tools/inputmethods/fcitx-engines/fcitx-table-other/default.nix @@ -1,22 +1,16 @@ -{ stdenv, fetchurl, fetchpatch, cmake, fcitx, gettext }: +{ stdenv, fetchurl, cmake, fcitx, gettext }: stdenv.mkDerivation rec { name = "fcitx-table-other-${version}"; - version = "0.2.3"; + version = "0.2.4"; src = fetchurl { url = "http://download.fcitx-im.org/fcitx-table-other/${name}.tar.xz"; - sha256 = "12fqbsjrpx5pndx2jf7fksrlp01a4yxz62h2vpxrbkpk73ljly4v"; + sha256 = "1di60lr6l5k2sdwi3yrc0hl89j2k0yipayrsn803vd040w1fgfhq"; }; buildInputs = [ cmake fcitx gettext ]; - patches = [ - (fetchpatch { url = https://sources.debian.net/data/main/f/fcitx-table-other/0.2.3-3/debian/patches/0001-table-other-fix-build.patch; - sha256 = "06n1df9szfgfjm5al8r1mvp4cib5h0cm601kwngl6k1vqyyjzg1j"; - }) - ]; - preInstall = '' substituteInPlace tables/cmake_install.cmake \ --replace ${fcitx} $out diff --git a/pkgs/tools/inputmethods/ibus/default.nix b/pkgs/tools/inputmethods/ibus/default.nix index f71a21b914f3..59ddab7294f5 100644 --- a/pkgs/tools/inputmethods/ibus/default.nix +++ b/pkgs/tools/inputmethods/ibus/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, fetchFromGitHub, autoreconfHook, gconf, intltool, makeWrapper, pkgconfig , vala, wrapGAppsHook, atk, dbus, dconf ? null, glib, gdk_pixbuf, gobjectIntrospection, gtk2 -, gtk3, gtk_doc, isocodes, python3, json_glib, libnotify ? null, enablePythonLibrary ? true +, gtk3, gtk-doc, isocodes, python3, json-glib, libnotify ? null, enablePythonLibrary ? true , enableUI ? true, withWayland ? false, libxkbcommon ? null, wayland ? null }: assert withWayland -> wayland != null && libxkbcommon != null; @@ -76,7 +76,7 @@ stdenv.mkDerivation rec { substituteInPlace data/dconf/Makefile.am --replace "dconf update" true substituteInPlace configure.ac --replace '$python2dir/ibus' $out/${python3.sitePackages}/ibus echo \#!${stdenv.shell} > data/dconf/make-dconf-override-db.sh - cp ${gtk_doc}/share/gtk-doc/data/gtk-doc.make . + cp ${gtk-doc}/share/gtk-doc/data/gtk-doc.make . ''; preAutoreconf = "touch ChangeLog"; @@ -97,7 +97,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ autoreconfHook gconf - gtk_doc + gtk-doc intltool makeWrapper pkgconfig @@ -116,7 +116,7 @@ stdenv.mkDerivation rec { gtk2 gtk3 isocodes - json_glib + json-glib libnotify ] ++ optionals withWayland [ libxkbcommon diff --git a/pkgs/tools/inputmethods/ibus/wrapper.nix b/pkgs/tools/inputmethods/ibus/wrapper.nix index d41ba1e791f9..2b93274b79a2 100644 --- a/pkgs/tools/inputmethods/ibus/wrapper.nix +++ b/pkgs/tools/inputmethods/ibus/wrapper.nix @@ -1,5 +1,5 @@ { stdenv, runCommand, makeWrapper, lndir -, dconf, hicolor_icon_theme, ibus, librsvg, plugins +, dconf, hicolor-icon-theme, ibus, librsvg, plugins }: let @@ -7,7 +7,7 @@ let env = { buildInputs = [ ibus ] ++ plugins; nativeBuildInputs = [ lndir makeWrapper ]; - propagatedUserEnvPackages = [ hicolor_icon_theme ]; + propagatedUserEnvPackages = [ hicolor-icon-theme ]; paths = [ ibus ] ++ plugins; inherit (ibus) meta; }; @@ -37,7 +37,7 @@ let --set IBUS_TABLE_LOCATION "$out/share/ibus-table" \ --prefix PYTHONPATH : "$PYTHONPATH" \ --prefix XDG_DATA_DIRS : "$out/share:$GSETTINGS_SCHEMAS_PATH" \ - --suffix XDG_DATA_DIRS : "${hicolor_icon_theme}/share" + --suffix XDG_DATA_DIRS : "${hicolor-icon-theme}/share" done for prog in ibus-daemon; do @@ -56,7 +56,7 @@ let --set IBUS_TABLE_LOCATION "$out/share/ibus-table" \ --prefix PYTHONPATH : "$PYTHONPATH" \ --prefix XDG_DATA_DIRS : "$out/share:$GSETTINGS_SCHEMAS_PATH" \ - --suffix XDG_DATA_DIRS : "${hicolor_icon_theme}/share" \ + --suffix XDG_DATA_DIRS : "${hicolor-icon-theme}/share" \ --add-flags "--cache=refresh" done ''; diff --git a/pkgs/tools/inputmethods/libinput-gestures/0001-hardcode-name.patch b/pkgs/tools/inputmethods/libinput-gestures/0001-hardcode-name.patch new file mode 100644 index 000000000000..b694fcabbd0d --- /dev/null +++ b/pkgs/tools/inputmethods/libinput-gestures/0001-hardcode-name.patch @@ -0,0 +1,13 @@ +diff --git a/libinput-gestures b/libinput-gestures +index f337ba3..fe56d66 100755 +--- a/libinput-gestures ++++ b/libinput-gestures +@@ -6,7 +6,7 @@ from collections import OrderedDict + from pathlib import Path + from distutils.version import LooseVersion as Version + +-PROG = Path(sys.argv[0]).stem ++PROG = "libinput-gestures" + + # Conf file containing gesture commands. + # Search first for user file then system file. diff --git a/pkgs/tools/inputmethods/libinput-gestures/0002-paths.patch b/pkgs/tools/inputmethods/libinput-gestures/0002-paths.patch new file mode 100644 index 000000000000..c6ee123db8b6 --- /dev/null +++ b/pkgs/tools/inputmethods/libinput-gestures/0002-paths.patch @@ -0,0 +1,43 @@ +diff --git a/libinput-gestures b/libinput-gestures +index f337ba3..5f5b05d 100755 +--- a/libinput-gestures ++++ b/libinput-gestures +@@ -75,17 +75,13 @@ def get_libinput_vers(): + 'Return the libinput installed version number string' + # Try to use newer libinput interface then fall back to old + # (depreciated) interface. +- res = run(('libinput', '--version'), check=False) ++ res = run(('@libinput@', '--version'), check=False) + return res.strip() if res else run(('libinput-list-devices', '--version')) + + # Libinput changed the way in which it's utilities are called + libvers = get_libinput_vers() +-if Version(libvers) >= Version('1.8'): +- cmd_debug_events = 'libinput debug-events' +- cmd_list_devices = 'libinput list-devices' +-else: +- cmd_debug_events = 'libinput-debug-events' +- cmd_list_devices = 'libinput-list-devices' ++cmd_debug_events = '@libinput@ debug-events' ++cmd_list_devices = '@libinput@ list-devices' + + def get_devices_list(): + 'Get list of devices and their attributes (as a dict) from libinput' +@@ -187,7 +183,7 @@ class COMMAND_internal(COMMAND): + + def run(self): + 'Get list of current workspaces and select next one' +- stdout = run(('wmctrl', '-d'), check=False) ++ stdout = run(('@wmctrl@', '-d'), check=False) + if not stdout: + # This command can fail on GNOME when you have only a single + # dynamic workspace using Xorg (probably a GNOME bug) so let's +@@ -220,7 +216,7 @@ class COMMAND_internal(COMMAND): + + # Switch to desired workspace + if index >= minindex and index < maxindex: +- run(('wmctrl', '-s', str(index))) ++ run(('@wmctrl@', '-s', str(index))) + + # Table of gesture handlers + handlers = OrderedDict() diff --git a/pkgs/tools/inputmethods/libinput-gestures/default.nix b/pkgs/tools/inputmethods/libinput-gestures/default.nix new file mode 100644 index 000000000000..e58cabc6791a --- /dev/null +++ b/pkgs/tools/inputmethods/libinput-gestures/default.nix @@ -0,0 +1,54 @@ +{ lib, stdenv, fetchFromGitHub, makeWrapper, + libinput, wmctrl, + xdotool ? null, + extraUtilsPath ? lib.optional (xdotool != null) xdotool +}: +stdenv.mkDerivation rec { + pname = "libinput-gestures"; + version = "2.32"; + name = "${pname}-${version}"; + + src = fetchFromGitHub { + owner = "bulletmark"; + repo = "libinput-gestures"; + rev = version; + sha256 = "1by6sabx0s8sd9w5675gc26q7yccxnxxsjg4dqlb6nbs0vcg81s7"; + }; + patches = [ + ./0001-hardcode-name.patch + ./0002-paths.patch + ]; + + nativeBuildInputs = [ makeWrapper ]; + + postPatch = + '' + substituteInPlace libinput-gestures-setup --replace /usr/ / + + substituteInPlace libinput-gestures \ + --replace /etc "$out/etc" \ + --subst-var-by libinput "${libinput}/bin/libinput" \ + --subst-var-by wmctrl "${wmctrl}/bin/wmctrl" + ''; + installPhase = + '' + runHook preInstall + ${stdenv.shell} libinput-gestures-setup -d "$out" install + runHook postInstall + ''; + postFixup = + '' + rm "$out/bin/libinput-gestures-setup" + substituteInPlace "$out/share/applications/libinput-gestures.desktop" --replace "/usr" "$out" + chmod +x "$out/share/applications/libinput-gestures.desktop" + wrapProgram "$out/bin/libinput-gestures" --prefix PATH : "${lib.makeBinPath extraUtilsPath}" + ''; + + meta = with stdenv.lib; { + homepage = https://github.com/bulletmark/libinput-gestures; + description = "Gesture mapper for libinput"; + license = licenses.gpl3Plus; + platforms = platforms.linux; + maintainers = with maintainers; [ teozkr ]; + }; +} diff --git a/pkgs/tools/misc/aptly/default.nix b/pkgs/tools/misc/aptly/default.nix index 6214bc216f8b..168a3f887728 100644 --- a/pkgs/tools/misc/aptly/default.nix +++ b/pkgs/tools/misc/aptly/default.nix @@ -2,14 +2,14 @@ let - version = "1.1.1"; + version = "1.2.0"; rev = "v${version}"; aptlySrc = fetchFromGitHub { inherit rev; owner = "smira"; repo = "aptly"; - sha256 = "197a7nh8li20slqxgn8s8xm13x5b8ansmabk8rx32sngb73hp4av"; + sha256 = "1acnkmgarz9rp0skkh7zzwkhisjlmbl74jqjmqd3mn42y528c34b"; }; aptlyCompletionSrc = fetchFromGitHub { diff --git a/pkgs/tools/misc/asciinema/default.nix b/pkgs/tools/misc/asciinema/default.nix index 4d6e90a347e7..0808704ecb78 100644 --- a/pkgs/tools/misc/asciinema/default.nix +++ b/pkgs/tools/misc/asciinema/default.nix @@ -4,7 +4,7 @@ let pythonPackages = python3Packages; in pythonPackages.buildPythonApplication rec { name = "asciinema-${version}"; - version = "1.4.0"; + version = "2.0.0"; buildInputs = with pythonPackages; [ nose ]; propagatedBuildInputs = with pythonPackages; [ requests ]; @@ -13,7 +13,7 @@ in pythonPackages.buildPythonApplication rec { owner = "asciinema"; repo = "asciinema"; rev = "v${version}"; - sha256 = "1m2gjqxb5gqyz19lvp7jmwp7cxjc6nb0b2rrlsg3z2bl6vmi1xn2"; + sha256 = "1f92hv9w58jf1f7igspjxvrxqn3n21kgya2zb56spqyydr4jzwdk"; }; patchPhase = '' diff --git a/pkgs/tools/misc/aspcud/default.nix b/pkgs/tools/misc/aspcud/default.nix index 974b7691cb93..859112d29bc2 100644 --- a/pkgs/tools/misc/aspcud/default.nix +++ b/pkgs/tools/misc/aspcud/default.nix @@ -1,42 +1,27 @@ -{ stdenv, fetchurl, - boost, clasp, cmake, gringo, re2c +{ stdenv, fetchzip +, boost, clasp, cmake, gringo, re2c }: -let - version = "1.9.1"; -in - stdenv.mkDerivation rec { + version = "1.9.4"; name = "aspcud-${version}"; - src = fetchurl { - url = "mirror://sourceforge/project/potassco/aspcud/${version}/aspcud-${version}-source.tar.gz"; - sha256 = "09sqbshwrqz2fvlkz73mns5i3m70fh8mvwhz8450izy5lsligsg0"; + src = fetchzip { + url = "https://github.com/potassco/aspcud/archive/v${version}.tar.gz"; + sha256 = "0vrf7h7g99vw1mybqfrpxamsnf89p18czlzgjmxl1zkiwc7vjpzw"; }; buildInputs = [ boost clasp cmake gringo re2c ]; - buildPhase = '' - cmake -DCMAKE_BUILD_TYPE=Release \ - -DGRINGO_LOC=${gringo}/bin/gringo \ - -DCLASP_LOC=${clasp}/bin/clasp \ - -DENCODING_LOC=$out/share/aspcud/specification.lp \ - . - - make - ''; - - installPhase = '' - mkdir -p $out/bin - cp bin/{aspcud,cudf2lp,lemon} $out/bin - - mkdir -p $out/share/aspcud - cp ../share/aspcud/specification.lp $out/share/aspcud - ''; + cmakeFlags = [ + "-DCMAKE_BUILD_TYPE=Release" + "-DASPCUD_GRINGO_PATH=${gringo}/bin/gringo" + "-DASPCUD_CLASP_PATH=${clasp}/bin/clasp" + ]; meta = with stdenv.lib; { description = "Solver for package problems in CUDF format using ASP"; - homepage = http://potasssco.sourceforge.net/; + homepage = "https://potassco.org/aspcud/"; platforms = platforms.all; maintainers = [ maintainers.hakuch ]; license = licenses.gpl3Plus; diff --git a/pkgs/tools/misc/autojump/default.nix b/pkgs/tools/misc/autojump/default.nix index ba38a55dda02..4d3376108b7e 100644 --- a/pkgs/tools/misc/autojump/default.nix +++ b/pkgs/tools/misc/autojump/default.nix @@ -1,7 +1,7 @@ { fetchurl, stdenv, python, bash }: let - version = "22.5.0"; + version = "22.5.1"; in stdenv.mkDerivation rec { name = "autojump-${version}"; @@ -9,7 +9,7 @@ in src = fetchurl { url = "http://github.com/joelthelion/autojump/archive/release-v${version}.tar.gz"; name = "autojump-${version}.tar.gz"; - sha256 = "00ai0j37ka3557a8m7ig44dby7v01pckwi8gl479vz5b5pw1z8cd"; + sha256 = "17z9j9936x0nizwrzf664bngh60x5qbvrrf1s5qdzd0f2gdanpvn"; }; buildInputs = [ python bash ]; diff --git a/pkgs/tools/misc/autorandr/default.nix b/pkgs/tools/misc/autorandr/default.nix index b744e70a4e2f..db2e1fc622fa 100644 --- a/pkgs/tools/misc/autorandr/default.nix +++ b/pkgs/tools/misc/autorandr/default.nix @@ -2,19 +2,23 @@ , python3Packages , fetchFromGitHub , systemd -, xrandr -, makeWrapper }: +, xrandr }: let python = python3Packages.python; - wrapPython = python3Packages.wrapPython; version = "1.4"; in stdenv.mkDerivation { name = "autorandr-${version}"; buildInputs = [ python ]; - nativeBuildInputs = [ makeWrapper ]; + + # no wrapper, as autorandr --batch does os.environ.clear() + buildPhase = '' + substituteInPlace autorandr.py \ + --replace 'os.popen("xrandr' 'os.popen("${xrandr}/bin/xrandr' \ + --replace '["xrandr"]' '["${xrandr}/bin/xrandr"]' + ''; installPhase = '' runHook preInstall @@ -40,11 +44,6 @@ in runHook postInstall ''; - postFixup = '' - wrapProgram $out/bin/autorandr \ - --prefix PATH : ${xrandr}/bin - ''; - src = fetchFromGitHub { owner = "phillipberndt"; repo = "autorandr"; diff --git a/pkgs/tools/misc/autorevision/default.nix b/pkgs/tools/misc/autorevision/default.nix index 02caf6e33f99..75c7b258a449 100644 --- a/pkgs/tools/misc/autorevision/default.nix +++ b/pkgs/tools/misc/autorevision/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { name = "autorevision-${version}"; - version = "1.20"; + version = "1.21"; src = fetchurl { url = "https://github.com/Autorevision/autorevision/releases/download/v%2F${version}/autorevision-${version}.tgz"; - sha256 = "1xlp7wn2vv17rp848ai272sifi6fmwdr6dg4im53hrf32j3gzlhy"; + sha256 = "07ssirjy2mgbqxr792n3rqa408hm7qnhwfjzd73rqfwvjcahy1q8"; }; buildInputs = [ diff --git a/pkgs/tools/misc/bandwidth/default.nix b/pkgs/tools/misc/bandwidth/default.nix index 899fb5f643ab..a8b6d5f3c252 100644 --- a/pkgs/tools/misc/bandwidth/default.nix +++ b/pkgs/tools/misc/bandwidth/default.nix @@ -11,11 +11,11 @@ let in stdenv.mkDerivation rec { name = "bandwidth-${version}"; - version = "1.4.2"; + version = "1.5.1"; src = fetchurl { url = "http://zsmith.co/archives/${name}.tar.gz"; - sha256 = "1p1kp5s3fdgy667q7mc9ywnps0sbj4lpr42561yhi59m69n8c3kd"; + sha256 = "1v9k1a2ilkbhc3viyacgq88c9if60kwsd1fy6rn84317qap4i7ib"; }; buildInputs = [ nasm ]; diff --git a/pkgs/tools/misc/bdf2psf/default.nix b/pkgs/tools/misc/bdf2psf/default.nix index 7ea3b1fd279c..e06c2dee000d 100644 --- a/pkgs/tools/misc/bdf2psf/default.nix +++ b/pkgs/tools/misc/bdf2psf/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "bdf2psf-${version}"; - version = "1.175"; + version = "1.178"; src = fetchurl { url = "mirror://debian/pool/main/c/console-setup/bdf2psf_${version}_all.deb"; - sha256 = "1bbj6wxdpjhy7n2614z0qx2310vhaxlvism6v6lxancb5bwwgdnf"; + sha256 = "1ngxa7hzfhvfhkvyc2qib3qyql5zz8rjg559wpi2jsi4hibj84vc"; }; buildInputs = [ dpkg ]; diff --git a/pkgs/tools/misc/brltty/default.nix b/pkgs/tools/misc/brltty/default.nix index 8dbcd08fba6e..6635f2931955 100644 --- a/pkgs/tools/misc/brltty/default.nix +++ b/pkgs/tools/misc/brltty/default.nix @@ -4,11 +4,11 @@ assert alsaSupport -> alsaLib != null; assert systemdSupport -> systemd != null; stdenv.mkDerivation rec { - name = "brltty-5.5"; + name = "brltty-5.6"; src = fetchurl { url = "http://brltty.com/archive/${name}.tar.gz"; - sha256 = "0slrqanwj9cm7ql0rpb296xq676zrc1sjyr13lh5lygp4b8qfpci"; + sha256 = "06by51n35w0jq14w1vimxk3ssrlmiiw49wpxw29rasc106mpysfn"; }; nativeBuildInputs = [ pkgconfig python3.pkgs.cython ]; diff --git a/pkgs/tools/misc/convmv/default.nix b/pkgs/tools/misc/convmv/default.nix index 6a76906a805f..e6ff7e99353b 100644 --- a/pkgs/tools/misc/convmv/default.nix +++ b/pkgs/tools/misc/convmv/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, perl }: stdenv.mkDerivation rec { - name = "convmv-1.15"; + name = "convmv-2.04"; src = fetchurl { url = "http://www.j3e.de/linux/convmv/${name}.tar.gz"; - sha256 = "0daiiapsrca8zlbmlz2kw2fn4vmkh48cblb70h08idchhk3sw5f3"; + sha256 = "075xn1ill26hbhg4nl54sp75b55db3ikl7lvhqb9ijvkpi67j6yy"; }; preBuild='' diff --git a/pkgs/tools/misc/ddcutil/default.nix b/pkgs/tools/misc/ddcutil/default.nix index ec9ca37c082e..052f52e2ebd4 100644 --- a/pkgs/tools/misc/ddcutil/default.nix +++ b/pkgs/tools/misc/ddcutil/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { name = "ddcutil-${version}"; - version = "0.8.5"; + version = "0.8.6"; src = fetchFromGitHub { owner = "rockowitz"; repo = "ddcutil"; rev = "v${version}"; - sha256 = "127a5v545gvfgxqqjxqafsg1p8i4qd5wnpdwccr38jbsphl6yzl4"; + sha256 = "1c4cl9cac90xf9rap6ss2d4yshcmhdq8pdfjz3g4cns789fs1vcf"; }; nativeBuildInputs = [ autoreconfHook pkgconfig ]; diff --git a/pkgs/tools/misc/direnv/default.nix b/pkgs/tools/misc/direnv/default.nix index b0c0de996e74..15d8647ff823 100644 --- a/pkgs/tools/misc/direnv/default.nix +++ b/pkgs/tools/misc/direnv/default.nix @@ -2,14 +2,14 @@ buildGoPackage rec { name = "direnv-${version}"; - version = "2.14.0"; + version = "2.15.1"; goPackagePath = "github.com/direnv/direnv"; src = fetchFromGitHub { owner = "direnv"; repo = "direnv"; rev = "v${version}"; - sha256 = "0xgb895dda7q7qyl5lg1jfjfb82daaf133dx0vw8lp7d67xqv9r8"; + sha256 = "07kzfkv5ssys788j0f1bp73gd7b53vwv2jsxkd85zwb3kby1145v"; }; postConfigure = '' diff --git a/pkgs/tools/misc/diskscan/default.nix b/pkgs/tools/misc/diskscan/default.nix index e1024d70bce9..9449b7759a8c 100644 --- a/pkgs/tools/misc/diskscan/default.nix +++ b/pkgs/tools/misc/diskscan/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "diskscan-${version}"; - version = "0.19"; + version = "0.20"; src = fetchFromGitHub { owner = "baruch"; repo = "diskscan"; rev = "${version}"; - sha256 = "0yqpaxfahbjr8hr9xw7nngncwigy7yncdwnyp5wy9s9wdp8mrjra"; + sha256 = "1s2df082yrnr3gqnapdsqz0yd0ld75bin37g0rms83ymzkh4ysgv"; }; buildInputs = [ ncurses zlib ]; diff --git a/pkgs/tools/misc/entr/default.nix b/pkgs/tools/misc/entr/default.nix index d37655134c55..b8791f5f32a2 100644 --- a/pkgs/tools/misc/entr/default.nix +++ b/pkgs/tools/misc/entr/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "entr-${version}"; - version = "3.9"; + version = "4.0"; src = fetchurl { url = "http://entrproject.org/code/${name}.tar.gz"; - sha256 = "0xk8y8asy0wxi5jx03c521p9919gjr8053lxpfzn83jkmqc8zmq2"; + sha256 = "12vc3xp0z0abmsy5kbix0wmn0sca39c8miyga6cijydi128zxm2a"; }; postPatch = '' diff --git a/pkgs/tools/misc/expect/default.nix b/pkgs/tools/misc/expect/default.nix index 0d1c81c00a65..ed210783db19 100644 --- a/pkgs/tools/misc/expect/default.nix +++ b/pkgs/tools/misc/expect/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, tcl, makeWrapper }: stdenv.mkDerivation rec { - version = "5.45"; + version = "5.45.4"; name = "expect-${version}"; src = fetchurl { url = "mirror://sourceforge/expect/Expect/${version}/expect${version}.tar.gz"; - sha256 = "0h60bifxj876afz4im35rmnbnxjx4lbdqp2ja3k30fwa8a8cm3dj"; + sha256 = "0d1cp5hggjl93xwc8h1y6adbnrvpkk0ywkd00inz9ndxn21xm9s9"; }; buildInputs = [ tcl ]; diff --git a/pkgs/tools/misc/fpart/default.nix b/pkgs/tools/misc/fpart/default.nix index b29e76413104..394310e572dd 100644 --- a/pkgs/tools/misc/fpart/default.nix +++ b/pkgs/tools/misc/fpart/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "fpart-${version}"; - version = "0.9.3"; + version = "1.0.0"; src = fetchurl { url = "http://contribs.martymac.org/fpart/${name}.tar.gz"; - sha256 = "0f1vm7c7v9nrd0mnz6qivpnngni6y53b11kvniclqfd25hhw6ggq"; + sha256 = "1p0ajmry18lcg82znfp8nxs4w3izic775l7df08hywlq4vfa66pg"; }; postInstall = '' diff --git a/pkgs/tools/misc/gparted/default.nix b/pkgs/tools/misc/gparted/default.nix index 71cfedcaec72..99c54b6d3964 100644 --- a/pkgs/tools/misc/gparted/default.nix +++ b/pkgs/tools/misc/gparted/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, intltool, gettext, makeWrapper -, parted, glib, libuuid, pkgconfig, gtkmm2, libxml2, hicolor_icon_theme +, parted, glib, libuuid, pkgconfig, gtkmm2, libxml2, hicolor-icon-theme , gpart, hdparm, procps, utillinux }: @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { configureFlags = [ "--disable-doc" ]; - buildInputs = [ parted glib libuuid gtkmm2 libxml2 hicolor_icon_theme ]; + buildInputs = [ parted glib libuuid gtkmm2 libxml2 hicolor-icon-theme ]; nativeBuildInputs = [ intltool gettext makeWrapper pkgconfig ]; postInstall = '' diff --git a/pkgs/tools/misc/grub4dos/default.nix b/pkgs/tools/misc/grub4dos/default.nix index 40d122242ffc..9719ea6fe554 100644 --- a/pkgs/tools/misc/grub4dos/default.nix +++ b/pkgs/tools/misc/grub4dos/default.nix @@ -6,13 +6,13 @@ let arch = else throw "Unknown architecture"; in stdenv.mkDerivation rec { name = "grub4dos-${version}"; - version = "0.4.6a-2016-12-24"; + version = "0.4.6a-2018-02-20"; src = fetchFromGitHub { owner = "chenall"; repo = "grub4dos"; - rev = "ca0371bb1e2365bfe4e44031a3b8b59e8c58ce0d"; - sha256 = "0a9m7n5la3dmbfx6n5iqlfbm607r1mww0wkimn29mlsc30d8aamr"; + rev = "74f6c862c73a4d21e61832174f4ab2f1d7f8b12a"; + sha256 = "0p85y5adnlcs4cdi9dg6f5fzzc1y12bmfhx13qs0576izx2rma3q"; }; nativeBuildInputs = [ nasm ]; diff --git a/pkgs/tools/misc/homesick/Gemfile.lock b/pkgs/tools/misc/homesick/Gemfile.lock index cac0e8d083ef..42ab916db3e3 100644 --- a/pkgs/tools/misc/homesick/Gemfile.lock +++ b/pkgs/tools/misc/homesick/Gemfile.lock @@ -1,9 +1,9 @@ GEM remote: https://rubygems.org/ specs: - homesick (1.1.3) + homesick (1.1.6) thor (>= 0.14.0) - thor (0.19.1) + thor (0.20.0) PLATFORMS ruby @@ -12,4 +12,4 @@ DEPENDENCIES homesick BUNDLED WITH - 1.10.6 + 1.14.6 diff --git a/pkgs/tools/misc/homesick/default.nix b/pkgs/tools/misc/homesick/default.nix index 0997b2268029..d35267fae27e 100644 --- a/pkgs/tools/misc/homesick/default.nix +++ b/pkgs/tools/misc/homesick/default.nix @@ -1,6 +1,6 @@ { lib, bundlerEnv, git}: bundlerEnv { - name = "homesick-1.1.3"; + name = "homesick-1.1.6"; gemdir = ./.; diff --git a/pkgs/tools/misc/homesick/gemset.nix b/pkgs/tools/misc/homesick/gemset.nix index b4a3b608bcb1..f51448276802 100644 --- a/pkgs/tools/misc/homesick/gemset.nix +++ b/pkgs/tools/misc/homesick/gemset.nix @@ -1,16 +1,19 @@ { homesick = { - version = "1.1.3"; + dependencies = ["thor"]; source = { - type = "gem"; - sha256 = "1pqsnbykisc6qamkz1gcbgis4az95sggxfdkq9v5hjr1a46q0s91"; + remotes = ["https://rubygems.org"]; + sha256 = "0lxvnp4ncbx0irlblfxbd1f8h4hl11hgmyiy35q79w137r3prxml"; + type = "gem"; }; + version = "1.1.6"; }; thor = { - version = "0.19.1"; - source = { - type = "gem"; - sha256 = "08p5gx18yrbnwc6xc0mxvsfaxzgy2y9i78xq7ds0qmdm67q39y4z"; - }; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0nmqpyj642sk4g16nkbq6pj856adpv91lp4krwhqkh2iw63aszdl"; + type = "gem"; + }; + version = "0.20.0"; }; -} +} \ No newline at end of file diff --git a/pkgs/tools/misc/keychain/default.nix b/pkgs/tools/misc/keychain/default.nix index b8b7666934b8..7fd9897a71bb 100644 --- a/pkgs/tools/misc/keychain/default.nix +++ b/pkgs/tools/misc/keychain/default.nix @@ -4,13 +4,13 @@ stdenv.mkDerivation rec { name = "keychain-${version}"; - version = "2.8.3"; + version = "2.8.5"; src = fetchFromGitHub { owner = "funtoo"; repo = "keychain"; rev = "${version}"; - sha256 = "0za2fi4g7ixzj3izgwlv71b3cviz3qhz43y4bhdkglg16x5cnzcb"; + sha256 = "1bkjlg0a2bbdjhwp37ci1rwikvrl4s3xlbf2jq2z4azc96dr83mj"; }; buildInputs = [ makeWrapper perl ]; diff --git a/pkgs/tools/misc/kronometer/default.nix b/pkgs/tools/misc/kronometer/default.nix index d74e2b4e12a7..f511e013f368 100644 --- a/pkgs/tools/misc/kronometer/default.nix +++ b/pkgs/tools/misc/kronometer/default.nix @@ -6,14 +6,14 @@ let pname = "kronometer"; - version = "2.1.3"; + version = "2.2.1"; in mkDerivation rec { name = "${pname}-${version}"; src = fetchurl { url = "mirror://kde/stable/${pname}/${version}/src/${name}.tar.xz"; - sha256 = "1z06gvaacm3d3a9smlmgg2vf0jdab5kqxx24r6v7iprqzgdpsn4i"; + sha256 = "18b2qi5b9hn8jy3yhav72n14z5l9w3p5fv5kslhbxc7rfvjr4h3x"; }; meta = with lib; { diff --git a/pkgs/tools/misc/latex2html/default.nix b/pkgs/tools/misc/latex2html/default.nix index 57d29437a211..b7963c3ed817 100644 --- a/pkgs/tools/misc/latex2html/default.nix +++ b/pkgs/tools/misc/latex2html/default.nix @@ -7,11 +7,11 @@ stdenv.mkDerivation rec { name = "latex2html-${version}"; - version = "2016"; + version = "2018"; src = fetchurl { url = "http://mirrors.ctan.org/support/latex2html/latex2html-${version}.tar.gz"; - sha256 = "028k0ypbq94mlhydf1sbqlphlfl2fhmlzhgqq5jjzihfmccbq7db"; + sha256 = "1qnlg8ajh0amy9gy8rh8sp1l224ak54264i3dhk7rrv9s4k7bqq9"; }; buildInputs = [ ghostscript netpbm perl ]; diff --git a/pkgs/tools/misc/lnav/default.nix b/pkgs/tools/misc/lnav/default.nix index 5ab05c92135a..4d7c27a39445 100644 --- a/pkgs/tools/misc/lnav/default.nix +++ b/pkgs/tools/misc/lnav/default.nix @@ -9,7 +9,7 @@ stdenv.mkDerivation rec { owner = "tstack"; repo = "lnav"; rev = "v${meta.version}"; - sha256 = "1jdjn64cxgbhhyg73cisrfrk7vjg1hr9nvkmfdk8gxc4g82y3xxc"; + sha256 = "0hq9ri6a18z682gihxlbh1rndka0v6brkdqsyfsgh4c2fgib4fb7"; inherit name; }; @@ -43,7 +43,7 @@ stdenv.mkDerivation rec { ''; downloadPage = "https://github.com/tstack/lnav/releases"; license = licenses.bsd2; - version = "0.8.2"; + version = "0.8.3"; maintainers = [ maintainers.dochang ]; platforms = platforms.unix; }; diff --git a/pkgs/tools/misc/mc/default.nix b/pkgs/tools/misc/mc/default.nix index fb4093d89b86..f9983cc0a7f6 100644 --- a/pkgs/tools/misc/mc/default.nix +++ b/pkgs/tools/misc/mc/default.nix @@ -3,11 +3,11 @@ stdenv.mkDerivation rec { name = "mc-${version}"; - version = "4.8.19"; + version = "4.8.20"; src = fetchurl { url = "http://www.midnight-commander.org/downloads/${name}.tar.xz"; - sha256 = "1pzjq4nfxl2aakxipdjs5hq9n14374ly1l00s40kd2djnnxmd7pb"; + sha256 = "072h7n9b3j79fqn48xaw0xhlcjavpsmfpz6nyh20lhmfz3sffzh1"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/tools/misc/mdbtools/git.nix b/pkgs/tools/misc/mdbtools/git.nix index 6289c35f35a7..2116815ed0c3 100644 --- a/pkgs/tools/misc/mdbtools/git.nix +++ b/pkgs/tools/misc/mdbtools/git.nix @@ -1,5 +1,5 @@ { stdenv, fetchgit, glib, readline, bison, flex, pkgconfig, - libiconv, autoreconfHook, which, txt2man, gnome_doc_utils, scrollkeeper }: + libiconv, autoreconfHook, which, txt2man, gnome-doc-utils, scrollkeeper }: stdenv.mkDerivation { name = "mdbtools-git-2014-07-25"; @@ -13,7 +13,7 @@ stdenv.mkDerivation { nativeBuildInputs = [ pkgconfig ]; buildInputs = [ glib readline bison flex autoreconfHook which txt2man - gnome_doc_utils scrollkeeper libiconv + gnome-doc-utils scrollkeeper libiconv ]; preAutoreconf = '' diff --git a/pkgs/tools/misc/mimeo/default.nix b/pkgs/tools/misc/mimeo/default.nix index 81d6d29b2bf2..52f685b22ca6 100644 --- a/pkgs/tools/misc/mimeo/default.nix +++ b/pkgs/tools/misc/mimeo/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, desktop_file_utils, file, python3Packages }: +{ stdenv, fetchurl, desktop-file-utils, file, python3Packages }: python3Packages.buildPythonApplication rec { name = "mimeo-${version}"; @@ -9,14 +9,14 @@ python3Packages.buildPythonApplication rec { sha256 = "126g3frks6zn6yc1r005qpmxg1pvvvf06ivpyvd9xribn2mwki2z"; }; - buildInputs = [ file desktop_file_utils ]; + buildInputs = [ file desktop-file-utils ]; propagatedBuildInputs = [ python3Packages.pyxdg ]; preConfigure = '' substituteInPlace Mimeo.py \ --replace "EXE_UPDATE_DESKTOP_DATABASE = 'update-desktop-database'" \ - "EXE_UPDATE_DESKTOP_DATABASE = '${desktop_file_utils}/bin/update-desktop-database'" \ + "EXE_UPDATE_DESKTOP_DATABASE = '${desktop-file-utils}/bin/update-desktop-database'" \ --replace "EXE_FILE = 'file'" \ "EXE_FILE = '${file}/bin/file'" ''; diff --git a/pkgs/tools/misc/mongodb-tools/default.nix b/pkgs/tools/misc/mongodb-tools/default.nix index 7e24c955a806..a728450d76e5 100644 --- a/pkgs/tools/misc/mongodb-tools/default.nix +++ b/pkgs/tools/misc/mongodb-tools/default.nix @@ -3,7 +3,7 @@ let tools = [ "bsondump" "mongodump" "mongoexport" "mongofiles" "mongoimport" - "mongooplog" "mongorestore" "mongostat" "mongotop" + "mongoreplay" "mongorestore" "mongostat" "mongotop" ]; in @@ -11,7 +11,7 @@ with stdenv.lib; buildGoPackage rec { name = "mongo-tools-${version}"; - version = "3.5.13"; + version = "3.7.2"; rev = "r${version}"; goPackagePath = "github.com/mongodb/mongo-tools"; @@ -21,17 +21,18 @@ buildGoPackage rec { inherit rev; owner = "mongodb"; repo = "mongo-tools"; - sha256 = "00klm4pyx5k39nn4pmfrpnkqxdhbzm7lprgwxszpirzrarh2g164"; + sha256 = "1y5hd4qw7422sqkj8vmy4agscvin3ck54r515bjrzn69iw73nhfl"; }; - goDeps = ./deps.nix; - nativeBuildInputs = [ pkgconfig ]; buildInputs = [ openssl_1_0_2 libpcap ]; # Mongodb incorrectly names all of their binaries main # Let's work around this with our own installer buildPhase = '' + # move vendored codes so nixpkgs go builder could find it + mv go/src/github.com/mongodb/mongo-tools/vendor/src/* go/src/github.com/mongodb/mongo-tools/vendor/ + runHook preBuild ${stdenv.lib.concatMapStrings (t: '' go build -o "$bin/bin/${t}" -tags ssl -ldflags "-s -w" $goPackagePath/${t}/main diff --git a/pkgs/tools/misc/mongodb-tools/deps.nix b/pkgs/tools/misc/mongodb-tools/deps.nix deleted file mode 100644 index 30de006db6f7..000000000000 --- a/pkgs/tools/misc/mongodb-tools/deps.nix +++ /dev/null @@ -1,182 +0,0 @@ -[ - { - goPackagePath = "golang.org/x/sys"; - fetch = { - type = "git"; - url = "https://go.googlesource.com/sys"; - rev = "314a259e304ff91bd6985da2a7149bbf91237993"; - sha256 = "0vya62c3kmhmqx6awlxx8hc84987xkym9rhs0q28vlhwk9kczdaa"; - }; - } - { - goPackagePath = "golang.org/x/crypto"; - fetch = { - type = "git"; - url = "https://github.com/golang/crypto"; - rev = "1f22c0103821b9390939b6776727195525381532"; - sha256 = "1acy12f396sr3lrnbcnym5q72qnlign5bagving41qijzjnc219m"; - }; - } - { - goPackagePath = "github.com/howeyc/gopass"; - fetch = { - type = "git"; - url = "https://github.com/howeyc/gopass"; - rev = "bf9dde6d0d2c004a008c27aaee91170c786f6db8"; - sha256 = "1jxzyfnqi0h1fzlsvlkn10bncic803bfhslyijcxk55mgh297g45"; - }; - } - { - goPackagePath = "gopkg.in/mgo.v2"; - fetch = { - type = "git"; - url = "https://github.com/10gen/mgo"; - rev = "39b4000d99037e917f3a3b9d2dcab667a9ef284a"; - sha256 = "1m0xgd3y32g15fhl204g2caarfi5rn41m8pyym0i2gl3jnv5zw99"; - }; - } - { - goPackagePath = "github.com/google/gopacket"; - fetch = { - type = "git"; - url = "https://github.com/google/gopacket"; - rev = "93b782132903d1846aab74cb1f62e6138564949f"; - sha256 = "0l5m5a8dnqbkhphyfq7anj5zv59s74q2l7i6w9r7xwysfiqyq335"; - }; - } - { - goPackagePath = "github.com/patrickmn/go-cache"; - fetch = { - type = "git"; - url = "https://github.com/patrickmn/go-cache"; - rev = "1881a9bccb818787f68c52bfba648c6cf34c34fa"; - sha256 = "1nd0kqijx6mrxb8wlh20bx73mwj0fqzla2sr68y6j6lz3fsy1fw2"; - }; - } - { - goPackagePath = "github.com/spacemonkeygo/openssl"; - fetch = { - type = "git"; - url = "https://github.com/10gen/openssl"; - rev = "2692b9f6fa95e72c75f8d9ba76e49c5dfd2cf8e4"; - sha256 = "16x2mx51977jrqw8d9hqhqmx892v2qf1k5xb01hhfklh58f527k2"; - }; - } - { - goPackagePath = "github.com/jtolds/gls"; - fetch = { - type = "git"; - url = "https://github.com/jtolds/gls"; - rev = "8ddce2a84170772b95dd5d576c48d517b22cac63"; - sha256 = "11rp9wbzkd71640rq0nwmgsddskx3qac8wzqz71ksdb7ixjj5fmj"; - }; - } - { - goPackagePath = "github.com/spacemonkeygo/spacelog"; - fetch = { - type = "git"; - url = "https://github.com/spacemonkeygo/spacelog"; - rev = "f936fb050dc6b5fe4a96b485a6f069e8bdc59aeb"; - sha256 = "00an6zlhjk5l0vk1zjzshhswsd0h4syi48n50hv0fcnbmpxc5hv2"; - }; - } - { - goPackagePath = "gopkg.in/tomb.v2"; - fetch = { - type = "git"; - url = "https://gopkg.in/tomb.v2"; - rev = "14b3d72120e8d10ea6e6b7f87f7175734b1faab8"; - sha256 = "1nza31jvkpka5431c4bdbirvjdy36b1b55sbzljqhqih25jrcjx5"; - }; - } - { - goPackagePath = "github.com/jtolds/gls"; - fetch = { - type = "git"; - url = "https://github.com/jtolds/gls"; - rev = "8ddce2a84170772b95dd5d576c48d517b22cac63"; - sha256 = "11rp9wbzkd71640rq0nwmgsddskx3qac8wzqz71ksdb7ixjj5fmj"; - }; - } - { - goPackagePath = "github.com/smartystreets/assertions"; - fetch = { - type = "git"; - url = "https://github.com/smartystreets/assertions"; - rev = "287b4346dc4e71a038c346375a9d572453bc469b"; - sha256 = "1nw9j9aircra68lbkp5bq4l8ayq4g3fvbb2x8qd2hg0vwgn5yaij"; - }; - } - { - goPackagePath = "github.com/smartystreets/goconvey"; - fetch = { - type = "git"; - url = "https://github.com/smartystreets/goconvey"; - rev = "bf58a9a1291224109919756b4dcc469c670cc7e4"; - sha256 = "1k8k6vvlpl5a19dbrywxjmcia36macjbajx2hb6ci64rdfyf5kz5"; - }; - } - { - goPackagePath = "github.com/jacobsa/oglematchers"; - fetch = { - type = "git"; - url = "https://github.com/jacobsa/oglematchers"; - rev = "3ecefc49db07722beca986d9bb71ddd026b133f0"; - sha256 = "0vrk5sfs1ymkg0gv5n5dn9x0kqiaw8gaapljj8q75mgrr1p5149y"; - }; - } - { - goPackagePath = "github.com/3rf/mongo-lint"; - fetch = { - type = "git"; - url = "https://github.com/3rf/mongo-lint"; - rev = "3550fdcf1f43b89aaeabaa4559eaae6dc4407e42"; - sha256 = "19b60a3i6kzssd15dg57y4bg49sw41idrsjdi8vr4j5lr5d7gviv"; - }; - } - { - goPackagePath = "github.com/mattn/go-runewidth"; - fetch = { - type = "git"; - url = "https://github.com/mattn/go-runewidth"; - rev = "d6bea18f789704b5f83375793155289da36a3c7f"; - sha256 = "1hnigpn7rjbwd1ircxkyx9hvi0xmxr32b2jdy2jzw6b3jmcnz1fs"; - }; - } - { - goPackagePath = "github.com/10gen/escaper"; - fetch = { - type = "git"; - url = "https://github.com/10gen/escaper"; - rev = "17fe61c658dcbdcbf246c783f4f7dc97efde3a8b"; - sha256 = "1iw86lg8ad5gdm46ryf4v431ix834l52lrjvcahq3c4dw1ylnbvl"; - }; - } - { - goPackagePath = "github.com/golang/snappy"; - fetch = { - type = "git"; - url = "https://github.com/golang/snappy"; - rev = "d9eb7a3d35ec988b8585d4a0068e462c27d28380"; - sha256 = "0wynarlr1y8sm9y9l29pm9dgflxriiialpwn01066snzjxnpmbyn"; - }; - } - { - goPackagePath = "github.com/nsf/termbox-go"; - fetch = { - type = "git"; - url = "https://github.com/nsf/termbox-go"; - rev = "0723e7c3d0a317dea811f0fbe4d6edd81908c971"; - sha256 = "1ak35nhlgjpbpnh7v9qvjyfsq52liz3niqfqva76p7a68pblwbr7"; - }; - } - { - goPackagePath = "github.com/jessevdk/go-flags"; - fetch = { - type = "git"; - url = "https://github.com/jessevdk/go-flags"; - rev = "97448c91aac742cbca3d020b3e769013a420a06f"; - sha256 = "0fv3yxvq8m3639a279hq4pf0c52ngqfl5n1vklcfympndrb7zjzj"; - }; - } -] diff --git a/pkgs/tools/misc/ostree/default.nix b/pkgs/tools/misc/ostree/default.nix index a8332ad494da..3b220153f173 100644 --- a/pkgs/tools/misc/ostree/default.nix +++ b/pkgs/tools/misc/ostree/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, autoreconfHook, pkgconfig, gtk_doc, gobjectIntrospection +{ stdenv, fetchFromGitHub, autoreconfHook, pkgconfig, gtk-doc, gobjectIntrospection , libgsystem, xz, e2fsprogs, libsoup, gpgme, which, autoconf, automake, libtool, fuse , libarchive, libcap, bzip2, yacc, libxslt, docbook_xsl, docbook_xml_dtd_42 }: @@ -30,7 +30,7 @@ in stdenv.mkDerivation { }; nativeBuildInputs = [ - autoconf automake libtool pkgconfig gtk_doc gobjectIntrospection which yacc + autoconf automake libtool pkgconfig gtk-doc gobjectIntrospection which yacc libxslt docbook_xsl docbook_xml_dtd_42 ]; diff --git a/pkgs/tools/misc/papis/default.nix b/pkgs/tools/misc/papis/default.nix index de69712eb5ee..49c57ab8dc90 100644 --- a/pkgs/tools/misc/papis/default.nix +++ b/pkgs/tools/misc/papis/default.nix @@ -1,39 +1,52 @@ -{ buildPythonApplication, lib, fetchFromGitHub +{ buildPythonApplication, lib, fetchFromGitHub, bashInteractive , argcomplete, arxiv2bib, beautifulsoup4, bibtexparser -, configparser, habanero, papis-python-rofi, pylibgen -, prompt_toolkit, pyparser, python_magic, pyyaml -, requests, unidecode, urwid, vobject, tkinter +, configparser, dmenu-python, habanero, papis-python-rofi +, pylibgen, prompt_toolkit, pyparser, pytest, python_magic +, pyyaml, requests, unidecode, urwid, vobject, tkinter , vim }: buildPythonApplication rec { pname = "papis"; - version = "0.5.2"; + version = "0.5.3"; # Missing tests on Pypi src = fetchFromGitHub { - owner = "alejandrogallo"; + owner = "papis"; repo = pname; rev = "v${version}"; - sha256 = "0cw6ajdaknijka3j2bkkkn0bcxqifk825kq0a0rdbbmc6661pgxb"; + sha256 = "1yc4ilb7bw099pi2vwawyf8mi0n1kp87wgwgwcwc841ibq62q8ic"; }; - postPatch = "sed -i 's/configparser>=3.0.0/# configparser>=3.0.0/' setup.py"; + postPatch = '' + sed -i 's/configparser>=3.0.0/# configparser>=3.0.0/' setup.py + patchShebangs tests + ''; propagatedBuildInputs = [ argcomplete arxiv2bib beautifulsoup4 bibtexparser - configparser habanero papis-python-rofi pylibgen - prompt_toolkit pyparser python_magic pyyaml + configparser dmenu-python habanero papis-python-rofi + pylibgen prompt_toolkit pyparser python_magic pyyaml requests unidecode urwid vobject tkinter vim ]; - # Papis tries to create the config folder under $HOME during the tests - preCheck = '' - mkdir -p check-phase - export HOME=$(pwd)/check-phase - ''; + checkInputs = [ pytest ]; + # Papis tries to create the config folder under $HOME during the tests + checkPhase = '' + mkdir -p check-phase + export PATH=$out/bin:$PATH + # Still don't know why this fails + sed -i 's/--set dir=hello //' tests/bash/test_default.sh + + # This test has been disabled since it requires a network connaction + sed -i 's/test_downloader_getter(self):/disabled_test_downloader_getter(self):/' papis/downloaders/tests/test_main.py + + export HOME=$(pwd)/check-phase + make test + SH=${bashInteractive}/bin/bash make test-non-pythonic + ''; meta = { description = "Powerful command-line document and bibliography manager"; diff --git a/pkgs/tools/misc/parcellite/default.nix b/pkgs/tools/misc/parcellite/default.nix index cb55226109b4..37073daa699d 100644 --- a/pkgs/tools/misc/parcellite/default.nix +++ b/pkgs/tools/misc/parcellite/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub, autoreconfHook -, gtk2, hicolor_icon_theme, intltool, pkgconfig +, gtk2, hicolor-icon-theme, intltool, pkgconfig , which, wrapGAppsHook, xdotool }: stdenv.mkDerivation rec { @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ autoreconfHook intltool pkgconfig wrapGAppsHook ]; - buildInputs = [ gtk2 hicolor_icon_theme ]; + buildInputs = [ gtk2 hicolor-icon-theme ]; preFixup = '' # Need which and xdotool on path to fix auto-pasting. diff --git a/pkgs/tools/misc/ponysay/default.nix b/pkgs/tools/misc/ponysay/default.nix index 0f5c15241439..e366a03a7f42 100644 --- a/pkgs/tools/misc/ponysay/default.nix +++ b/pkgs/tools/misc/ponysay/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, python3, texinfo, makeWrapper }: stdenv.mkDerivation rec { - name = "ponysay-3.0.2"; + name = "ponysay-3.0.3"; src = fetchurl { - url = "https://github.com/erkin/ponysay/archive/3.0.2.tar.gz"; - sha256 = "03avcbl96rv718lgg6yyrq5mvg3xxzccrnnb6brf4g9mcrwqmsb9"; + url = "https://github.com/erkin/ponysay/archive/3.0.3.tar.gz"; + sha256 = "12mjabf5cpp5dgg63s19rlyq3dhhpzzy2sa439yncqzsk7rdg0n3"; }; buildInputs = [ python3 texinfo makeWrapper ]; diff --git a/pkgs/tools/misc/quota/default.nix b/pkgs/tools/misc/quota/default.nix index a13f7160aa69..dfcefe092008 100644 --- a/pkgs/tools/misc/quota/default.nix +++ b/pkgs/tools/misc/quota/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, e2fsprogs, openldap, pkgconfig }: stdenv.mkDerivation rec { - version = "4.03"; + version = "4.04"; name = "quota-${version}"; src = fetchurl { url = "mirror://sourceforge/linuxquota/quota-${version}.tar.gz"; - sha256 = "0jv7vhxhjp3gc4hwgmrhg448sbzzqib80gdas9nm0c5zwyd4sv4w"; + sha256 = "1pwfxza923j75z5lx0w89pj09745zi1swy77cm0zalbzgs4f2nvk"; }; outputs = [ "out" "dev" "doc" "man" ]; diff --git a/pkgs/tools/misc/rmlint/default.nix b/pkgs/tools/misc/rmlint/default.nix index 2ff86f5cbdf6..640e641dd477 100644 --- a/pkgs/tools/misc/rmlint/default.nix +++ b/pkgs/tools/misc/rmlint/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub, - gettext, glib, json_glib, libelf, pkgconfig, scons, sphinx, utillinux }: + gettext, glib, json-glib, libelf, pkgconfig, scons, sphinx, utillinux }: with stdenv.lib; stdenv.mkDerivation rec { @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { configurePhase = "scons config"; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ gettext glib json_glib libelf scons sphinx utillinux ]; + buildInputs = [ gettext glib json-glib libelf scons sphinx utillinux ]; buildPhase = "scons"; diff --git a/pkgs/tools/misc/rpm-ostree/default.nix b/pkgs/tools/misc/rpm-ostree/default.nix index d6cad51ce753..8c2845dc8ebd 100644 --- a/pkgs/tools/misc/rpm-ostree/default.nix +++ b/pkgs/tools/misc/rpm-ostree/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub, ostree, rpm, which, autoconf, automake, libtool, pkgconfig, - libcap, glib, libgsystem, json_glib, libarchive, libsolv, librepo, gtk_doc, elfutils, + libcap, glib, libgsystem, json-glib, libarchive, libsolv, librepo, gtk-doc, elfutils, gperf, cmake, pcre, check, python, libxslt, docbook_xsl, docbook_xml_dtd_42, acl }: let @@ -31,7 +31,7 @@ in stdenv.mkDerivation { nativeBuildInputs = [ pkgconfig ]; buildInputs = [ which autoconf automake libtool libcap ostree rpm glib libgsystem gperf - json_glib libarchive libsolv librepo gtk_doc libxslt docbook_xsl docbook_xml_dtd_42 + json-glib libarchive libsolv librepo gtk-doc libxslt docbook_xsl docbook_xml_dtd_42 cmake pcre check python # FIXME: get rid of this once libarchive properly propagates this acl diff --git a/pkgs/tools/misc/scfbuild/default.nix b/pkgs/tools/misc/scfbuild/default.nix new file mode 100644 index 000000000000..a310135727db --- /dev/null +++ b/pkgs/tools/misc/scfbuild/default.nix @@ -0,0 +1,30 @@ +{ lib, buildPythonApplication, fetchFromGitHub, python, pyyaml, fonttools, fontforge }: + +buildPythonApplication rec { + name = "scfbuild-${version}"; + version = "1.0.3"; + + src = fetchFromGitHub { + owner = "eosrei"; + repo = "scfbuild"; + rev = "c179c8d279b7cc0a9a3536a713ac880ac6010318"; + sha256 = "1bsi7k4kkj914pycp1g92050hjxscyvc9qflqb3cv5yz3c93cs46"; + }; + + phases = [ "unpackPhase" "installPhase" "fixupPhase" ]; + + propagatedBuildInputs = [ pyyaml fonttools fontforge ]; + + installPhase = '' + mkdir -p $out/${python.sitePackages} + cp -r scfbuild $out/${python.sitePackages} + cp -r bin $out + ''; + + meta = with lib; { + description = "SVGinOT color font builder"; + homepage = https://github.com/eosrei/scfbuild; + license = licenses.gpl3; + maintainers = with maintainers; [ abbradar ]; + }; +} diff --git a/pkgs/tools/misc/system-config-printer/default.nix b/pkgs/tools/misc/system-config-printer/default.nix index 11d61cfe30f3..90a17bdff704 100644 --- a/pkgs/tools/misc/system-config-printer/default.nix +++ b/pkgs/tools/misc/system-config-printer/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, udev, intltool, pkgconfig, glib, xmlto, wrapGAppsHook , makeWrapper, gtk3, docbook_xml_dtd_412, docbook_xsl -, libxml2, desktop_file_utils, libusb1, cups, gdk_pixbuf, pango, atk, libnotify -, gobjectIntrospection, libgnome_keyring3 +, libxml2, desktop-file-utils, libusb1, cups, gdk_pixbuf, pango, atk, libnotify +, gobjectIntrospection, libgnome-keyring3 , cups-filters , pythonPackages , withGUI ? true @@ -20,10 +20,10 @@ stdenv.mkDerivation rec { buildInputs = [ intltool pkgconfig glib udev libusb1 cups xmlto - libxml2 docbook_xml_dtd_412 docbook_xsl desktop_file_utils + libxml2 docbook_xml_dtd_412 docbook_xsl desktop-file-utils pythonPackages.python pythonPackages.wrapPython libnotify gobjectIntrospection gdk_pixbuf pango atk - libgnome_keyring3 + libgnome-keyring3 ]; nativeBuildInputs = [ wrapGAppsHook ]; diff --git a/pkgs/tools/misc/ttylog/default.nix b/pkgs/tools/misc/ttylog/default.nix index fa45b0f8bd26..3baafa29677b 100644 --- a/pkgs/tools/misc/ttylog/default.nix +++ b/pkgs/tools/misc/ttylog/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "ttylog-${version}"; - version = "0.29"; + version = "0.31"; src = fetchFromGitHub { owner = "rocasa"; repo = "ttylog"; rev = version; - sha256 = "035i9slmdgds5azwxqwp6skxykvaq3mq4jckvm49fng8jq09z7zr"; + sha256 = "0c746bpjpa77vsr88fxk8h1803p5np1di1mpjf4jy5bv5x3zwm07"; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/tools/misc/unclutter-xfixes/default.nix b/pkgs/tools/misc/unclutter-xfixes/default.nix index dd13a0d9adce..9f43a7bd699f 100644 --- a/pkgs/tools/misc/unclutter-xfixes/default.nix +++ b/pkgs/tools/misc/unclutter-xfixes/default.nix @@ -2,7 +2,7 @@ xlibsWrapper, libev, libXi, libXfixes, pkgconfig, asciidoc, libxslt, docbook_xsl }: -let version = "1.2"; in +let version = "1.3"; in stdenv.mkDerivation { name = "unclutter-xfixes-${version}"; @@ -12,7 +12,7 @@ stdenv.mkDerivation { owner = "Airblader"; repo = "unclutter-xfixes"; rev = "v${version}"; - sha256 = "1pw567mj7mq5kr8mqnyrvy7jj62qfg6zgqfyzz21nncslddnjzg8"; + sha256 = "1iikrz0023wygv29ny20xj1hlv9ry7hghlwjii6rj4jm59vl0mlz"; }; nativeBuildInputs = [pkgconfig]; diff --git a/pkgs/tools/misc/uutils-coreutils/default.nix b/pkgs/tools/misc/uutils-coreutils/default.nix new file mode 100644 index 000000000000..7f6e4f760b3b --- /dev/null +++ b/pkgs/tools/misc/uutils-coreutils/default.nix @@ -0,0 +1,39 @@ +{ stdenv, fetchFromGitHub, rustPlatform, cargo, cmake, sphinx, lib, prefix ? "uutils-" }: + +rustPlatform.buildRustPackage { + name = "uutils-coreutils-2018-02-09"; + src = fetchFromGitHub { + owner = "uutils"; + repo = "coreutils"; + rev = "f333ab26b03294a32a10c1c203a03c6b5cf8a89a"; + sha256 = "0nkggs5nqvc1mxzzgcsqm1ahchh4ll11xh0xqmcljrr5yg1rhhzf"; + }; + + # too many impure/platform-dependent tests + doCheck = false; + + cargoSha256 = "0qv2wz1bxhm5xhzbic7cqmn8jj8fyap0s18ylia4fbwpmv89nkc5"; + + makeFlags = + [ "CARGO=${cargo}/bin/cargo" "PREFIX=$(out)" "PROFILE=release" "INSTALLDIR_MAN=$(out)/share/man/man1" ] + ++ lib.optional (prefix != null) [ "PROG_PREFIX=${prefix}" ]; + + nativeBuildInputs = [ cmake ]; + buildInputs = [ cargo sphinx ]; + + # empty {build,install}Phase to use defaults of `stdenv.mkDerivation` rather than rust defaults + buildPhase = ""; + installPhase = ""; + + meta = with stdenv.lib; { + description = "Cross-platform Rust rewrite of the GNU coreutils"; + longDescription = '' + uutils is an attempt at writing universal (as in cross-platform) + CLI utils in Rust. This repo is to aggregate the GNU coreutils rewrites. + ''; + homepage = https://github.com/uutils/coreutils; + maintainers = with maintainers; [ ma27 ]; + license = licenses.mit; + platforms = platforms.unix; + }; +} diff --git a/pkgs/tools/misc/vmtouch/default.nix b/pkgs/tools/misc/vmtouch/default.nix index 820c5a65c740..e5bb23016ae9 100644 --- a/pkgs/tools/misc/vmtouch/default.nix +++ b/pkgs/tools/misc/vmtouch/default.nix @@ -2,14 +2,14 @@ stdenv.mkDerivation rec { pname = "vmtouch"; - version = "1.1.0"; + version = "1.3.0"; name = "${pname}-git-${version}"; src = fetchFromGitHub { owner = "hoytech"; repo = "vmtouch"; rev = "v${version}"; - sha256 = "1cr8bw3favdvc3kc05n1r7f5fibqqv54bn3z2jwj70br8s5g0qx0"; + sha256 = "0xpigfpwidk25k605y2m2g1952nzl5fgp0wn65hhn7hbra7srglf"; }; buildInputs = [perl]; diff --git a/pkgs/tools/misc/xdo/default.nix b/pkgs/tools/misc/xdo/default.nix index b3c97207b1d6..c33e01fa0e71 100644 --- a/pkgs/tools/misc/xdo/default.nix +++ b/pkgs/tools/misc/xdo/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "xdo-${version}"; - version = "0.5.6"; + version = "0.5.7"; src = fetchFromGitHub { owner = "baskerville"; repo = "xdo"; rev = version; - sha256 = "1i8xlsp36ji7cvyh66ajqsf59hxpwm0xvnn9laq7nbajcx3qqlnh"; + sha256 = "1h3jrygcjjbavdbkpx2hscsf0yf97gk487lzjdlvymd7dxdv9hy9"; }; makeFlags = "PREFIX=$(out)"; diff --git a/pkgs/tools/misc/xtitle/default.nix b/pkgs/tools/misc/xtitle/default.nix index 4be863993901..708675fb651c 100644 --- a/pkgs/tools/misc/xtitle/default.nix +++ b/pkgs/tools/misc/xtitle/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, libxcb, xcbutil, xcbutilwm, git }: stdenv.mkDerivation rec { - name = "xtitle-0.3"; + name = "xtitle-0.4.3"; src = fetchurl { - url = "https://github.com/baskerville/xtitle/archive/0.3.tar.gz"; - sha256 = "07r36f4ad1q0dpkx3ykd49xlmi24d8mjqwh40j228k81wsvzayl1"; + url = "https://github.com/baskerville/xtitle/archive/0.4.3.tar.gz"; + sha256 = "0bk4mxx0vky37f66b2y34nggi1f7fnrmsprkxyc8mskj6qcrbm5h"; }; diff --git a/pkgs/tools/misc/yad/default.nix b/pkgs/tools/misc/yad/default.nix index 8dfd73ef20cb..31b8d673a988 100644 --- a/pkgs/tools/misc/yad/default.nix +++ b/pkgs/tools/misc/yad/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, intltool, gtk2, hicolor_icon_theme +{ stdenv, fetchurl, pkgconfig, intltool, gtk2, hicolor-icon-theme , wrapGAppsHook }: stdenv.mkDerivation rec { @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { # for gcc5: c11 inline semantics breaks the build NIX_CFLAGS_COMPILE = "-fgnu89-inline"; - buildInputs = [ gtk2 hicolor_icon_theme ]; + buildInputs = [ gtk2 hicolor-icon-theme ]; nativeBuildInputs = [ pkgconfig intltool wrapGAppsHook ]; diff --git a/pkgs/tools/misc/yank/default.nix b/pkgs/tools/misc/yank/default.nix index 3d0338febcd5..36aa4ab09c46 100644 --- a/pkgs/tools/misc/yank/default.nix +++ b/pkgs/tools/misc/yank/default.nix @@ -8,7 +8,7 @@ stdenv.mkDerivation rec { owner = "mptre"; repo = "yank"; rev = "v${meta.version}"; - sha256 = "0nf9y3jsvfjxa3mgigywnyirznn1m4zjm1glnwndrjsjrkcpnzb5"; + sha256 = "0v5aynrilm4fj7gz03q0yz6806ssjxhlv4bsa0213bgkin5iiws7"; inherit name; }; @@ -27,7 +27,7 @@ stdenv.mkDerivation rec { ''; downloadPage = "https://github.com/mptre/yank/releases"; license = licenses.mit; - version = "0.8.2"; + version = "0.8.3"; maintainers = [ maintainers.dochang ]; platforms = platforms.unix; }; diff --git a/pkgs/tools/misc/you-get/default.nix b/pkgs/tools/misc/you-get/default.nix index 3a917040863e..5ae99d239391 100644 --- a/pkgs/tools/misc/you-get/default.nix +++ b/pkgs/tools/misc/you-get/default.nix @@ -2,7 +2,7 @@ buildPythonApplication rec { pname = "you-get"; - version = "0.4.1011"; + version = "0.4.1025"; # Tests aren't packaged, but they all hit the real network so # probably aren't suitable for a build environment anyway. @@ -10,7 +10,7 @@ buildPythonApplication rec { src = fetchPypi { inherit pname version; - sha256 = "0h6aspnfic30s89xsv6qss1jfka9px4ll60bqrjbds4y0k3h818g"; + sha256 = "1dbalpwhzn39kgswjy84720wfjssa087adavbwig53krsjdvhj6k"; }; meta = with stdenv.lib; { diff --git a/pkgs/tools/misc/youtube-dl/default.nix b/pkgs/tools/misc/youtube-dl/default.nix index 0386896d97f8..4f082f28a7d4 100644 --- a/pkgs/tools/misc/youtube-dl/default.nix +++ b/pkgs/tools/misc/youtube-dl/default.nix @@ -16,11 +16,11 @@ with stdenv.lib; buildPythonApplication rec { name = "youtube-dl-${version}"; - version = "2018.02.08"; + version = "2018.02.22"; src = fetchurl { url = "https://yt-dl.org/downloads/${version}/${name}.tar.gz"; - sha256 = "0iq5mav782gz0gm00rry3v7gdxkkx4y1k0p20pvz32ga4id5k1mg"; + sha256 = "112qmwrkd0cpyx2h20k6y07lw7iixvj8yya7r97h3k1y1py9vbz8"; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/pkgs/tools/misc/yubikey-personalization-gui/default.nix b/pkgs/tools/misc/yubikey-personalization-gui/default.nix index 31f39b887c56..e6a1c93d2bb6 100644 --- a/pkgs/tools/misc/yubikey-personalization-gui/default.nix +++ b/pkgs/tools/misc/yubikey-personalization-gui/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, pkgconfig, yubikey-personalization, qt4, qmake4Hook, libyubikey }: stdenv.mkDerivation rec { - name = "yubikey-personalization-gui-3.1.24"; + name = "yubikey-personalization-gui-3.1.25"; src = fetchurl { url = "https://developers.yubico.com/yubikey-personalization-gui/Releases/${name}.tar.gz"; - sha256 = "0aj8cvajswkwzig0py0mjnfw0m8xsilisdcnixpjx9xxsxz5yacq"; + sha256 = "1knyv5yss8lhzaff6jpfqv12fjf1b8b21mfxzx3qi0hw4nl8n2v8"; }; nativeBuildInputs = [ pkgconfig qmake4Hook ]; diff --git a/pkgs/tools/networking/arpoison/default.nix b/pkgs/tools/networking/arpoison/default.nix new file mode 100644 index 000000000000..cedd8597870b --- /dev/null +++ b/pkgs/tools/networking/arpoison/default.nix @@ -0,0 +1,29 @@ +{ stdenv, fetchzip, libnet }: + +stdenv.mkDerivation rec { + name = "arpoison-0.7"; + + buildInputs = [ libnet ]; + + src = fetchzip { + url = "http://www.arpoison.net/${name}.tar.gz"; + sha256 = "0krhszx3s0qwfg4rma5a51ak71nnd9xfs2ibggc3hwiz506s2x37"; + }; + + postPatch = "substituteInPlace Makefile --replace gcc cc"; + + installPhase = '' + mkdir -p $out/bin $out/share/man/man8 + gzip arpoison.8 + cp arpoison $out/bin + cp arpoison.8.gz $out/share/man/man8 + ''; + + meta = with stdenv.lib; { + description = "UNIX arp cache update utility"; + homepage = http://www.arpoison.net/; + license = with licenses; [ gpl2 ]; + maintainers = [ maintainers.michalrus ]; + platforms = platforms.unix; + }; +} diff --git a/pkgs/tools/networking/assh/default.nix b/pkgs/tools/networking/assh/default.nix index e3a147b20b17..7af7a8f551d1 100644 --- a/pkgs/tools/networking/assh/default.nix +++ b/pkgs/tools/networking/assh/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { name = "assh-${version}"; - version = "2.6.0"; + version = "2.7.0"; goPackagePath = "github.com/moul/advanced-ssh-config"; subPackages = [ "cmd/assh" ]; @@ -18,7 +18,7 @@ buildGoPackage rec { repo = "advanced-ssh-config"; owner = "moul"; rev = "v${version}"; - sha256 = "1vv98dz5822k51xklnmky0lwfjw8nc6ryvn8lmv9n63ppwh9s2s6"; + sha256 = "0jfpcr8990lb7kacadbishdkz5l8spw24ksdlb79x34sdbbp3fm6"; }; meta = with stdenv.lib; { diff --git a/pkgs/tools/networking/bwm-ng/default.nix b/pkgs/tools/networking/bwm-ng/default.nix index cfcd051f2816..128ebc155b56 100644 --- a/pkgs/tools/networking/bwm-ng/default.nix +++ b/pkgs/tools/networking/bwm-ng/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, ncurses }: +{ writeText, stdenv, fetchurl, ncurses }: let version = "0.6.1"; @@ -13,6 +13,32 @@ stdenv.mkDerivation rec { buildInputs = [ ncurses ]; + # gcc7 has some issues with inline functions + patches = [ + (writeText "gcc7.patch" + '' + --- a/src/bwm-ng.c + +++ b/src/bwm-ng.c + @@ -27,5 +27,5 @@ + /* handle interrupt signal */ + void sigint(int sig) FUNCATTR_NORETURN; + -inline void init(void); + +static inline void init(void); + + /* clear stuff and exit */ + --- a/src/options.c + +++ b/src/options.c + @@ -35,5 +35,5 @@ + inline int str2output_type(char *optarg); + #endif + -inline int str2out_method(char *optarg); + +static inline int str2out_method(char *optarg); + inline int str2in_method(char *optarg); + + '') + ]; + + # This code uses inline in the gnu89 sense: see http://clang.llvm.org/compatibility.html#inline NIX_CFLAGS_COMPILE = if stdenv.cc.isClang then "-std=gnu89" else null; diff --git a/pkgs/tools/networking/connman/default.nix b/pkgs/tools/networking/connman/default.nix index f40b1ce6f4c9..45fabeee1393 100644 --- a/pkgs/tools/networking/connman/default.nix +++ b/pkgs/tools/networking/connman/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, openconnect, file, gawk, +{ stdenv, fetchurl, fetchpatch, pkgconfig, openconnect, file, gawk, openvpn, vpnc, glib, dbus, iptables, gnutls, polkit, wpa_supplicant, readline6, pptp, ppp }: @@ -16,6 +16,14 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig file gawk ]; + patches = [ + (fetchpatch { + name = "header-include.patch"; + url = "https://git.kernel.org/pub/scm/network/connman/connman.git/patch/?id=bdfb3526466f8fb8f13d9259037d8f42c782ce24"; + sha256 = "0q6ysy2xvvcmkcbw1y29x90g7g7kih7v95k1xbxdcxkras5yl8nf"; + }) + ]; + preConfigure = '' export WPASUPPLICANT=${wpa_supplicant}/sbin/wpa_supplicant export PPPD=${ppp}/sbin/pppd diff --git a/pkgs/tools/networking/dhcp/default.nix b/pkgs/tools/networking/dhcp/default.nix index e7a593ff830c..1812e95dcbb7 100644 --- a/pkgs/tools/networking/dhcp/default.nix +++ b/pkgs/tools/networking/dhcp/default.nix @@ -37,6 +37,8 @@ stdenv.mkDerivation rec { "--localstatedir=/var" ] ++ stdenv.lib.optionals (openldap != null) [ "--with-ldap" "--with-ldapcrypto" ]; + NIX_CFLAGS_COMPILE = [ "-Wno-error=pointer-compare" ]; + installFlags = [ "DESTDIR=\${out}" ]; postInstall = diff --git a/pkgs/tools/networking/dhcpcd/default.nix b/pkgs/tools/networking/dhcpcd/default.nix index d8316c66203d..5b7befb3bf64 100644 --- a/pkgs/tools/networking/dhcpcd/default.nix +++ b/pkgs/tools/networking/dhcpcd/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, pkgconfig, udev }: stdenv.mkDerivation rec { - name = "dhcpcd-6.11.5"; + name = "dhcpcd-7.0.1"; src = fetchurl { url = "mirror://roy/dhcpcd/${name}.tar.xz"; - sha256 = "17nnhxmbdcc7k2mh6sgvxisqcqbic5540xbig363ds97gvf795kg"; + sha256 = "1j7kyg9gm5d1k6qjdscjz2rjgpqia0dxgk69lswp21y0pizm6dlb"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/tools/networking/dnscrypt-wrapper/default.nix b/pkgs/tools/networking/dnscrypt-wrapper/default.nix index 1282c72452f4..cb12300d51ea 100644 --- a/pkgs/tools/networking/dnscrypt-wrapper/default.nix +++ b/pkgs/tools/networking/dnscrypt-wrapper/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "dnscrypt-wrapper-${version}"; - version = "0.3"; + version = "0.4.0"; src = fetchFromGitHub { owner = "Cofyc"; repo = "dnscrypt-wrapper"; rev = "v${version}"; - sha256 = "0wnkgn0ajx1qmfyb264jvpqxlbravdcq4m485iaa3wjp82g8xlca"; + sha256 = "121y93sb06qc50fj7vv47r6dpzv77hh7ywl7sgrfp8i4jf4kaspa"; }; enableParallelBuilding = true; diff --git a/pkgs/tools/networking/dnsmasq/default.nix b/pkgs/tools/networking/dnsmasq/default.nix index badf33074465..6205934084e8 100644 --- a/pkgs/tools/networking/dnsmasq/default.nix +++ b/pkgs/tools/networking/dnsmasq/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, dbus_libs, nettle, libidn, libnetfilter_conntrack }: +{ stdenv, fetchurl, pkgconfig, dbus_libs, nettle, libidn, libnetfilter_conntrack, fetchpatch }: with stdenv.lib; let @@ -18,6 +18,16 @@ stdenv.mkDerivation rec { sha256 = "0ar5h5v3kas2qx2wgy5iqin15gc4jhqrqs067xacgc3lii1rz549"; }; + patches = [ + (fetchpatch { + name = "CVE-2017-15107.patch"; + url = "http://thekelleys.org.uk/gitweb/?p=dnsmasq.git;a=patch;h=4fe6744a220eddd3f1749b40cac3dfc510787de6"; + sha256 = "0r8grhh1q46z8v6manx1vvfpf2vmchfzsg7l1djh63b1fy1mbjkk"; + # changelog does not apply cleanly but its safe to skip + excludes = [ "CHANGELOG" ]; + }) + ]; + preBuild = '' makeFlagsArray=("COPTS=${copts}") ''; diff --git a/pkgs/tools/networking/dnsperf/default.nix b/pkgs/tools/networking/dnsperf/default.nix index b021201a4d46..97aad141239e 100644 --- a/pkgs/tools/networking/dnsperf/default.nix +++ b/pkgs/tools/networking/dnsperf/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, bind, libseccomp, zlib }: +{ stdenv, fetchurl, bind, libseccomp, zlib, openssl }: stdenv.mkDerivation rec { name = "dnsperf-${version}"; @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { outputs = [ "out" "man" "doc" ]; - buildInputs = [ bind libseccomp zlib ]; + buildInputs = [ bind libseccomp zlib openssl ]; postInstall = '' mkdir -p "$out/share/doc/" diff --git a/pkgs/tools/networking/dropbear/default.nix b/pkgs/tools/networking/dropbear/default.nix index 709fb9540d16..b7ef3b8fa75b 100644 --- a/pkgs/tools/networking/dropbear/default.nix +++ b/pkgs/tools/networking/dropbear/default.nix @@ -4,11 +4,11 @@ }: stdenv.mkDerivation rec { - name = "dropbear-2017.75"; + name = "dropbear-2018.76"; src = fetchurl { url = "http://matt.ucc.asn.au/dropbear/releases/${name}.tar.bz2"; - sha256 = "1309cm2aw62n9m3h38prvgsqr8bj85hfasgnvwkd42cp3k5ivg3c"; + sha256 = "0rgavbzw7jrs5wslxm0dnwx2m409yzxd9hazd92r7kx8xikr3yzj"; }; dontDisableStatic = enableStatic; diff --git a/pkgs/tools/networking/getmail/default.nix b/pkgs/tools/networking/getmail/default.nix index ff5a6c1eaeea..4a358255b10c 100644 --- a/pkgs/tools/networking/getmail/default.nix +++ b/pkgs/tools/networking/getmail/default.nix @@ -1,13 +1,13 @@ { stdenv, fetchurl, python2Packages }: python2Packages.buildPythonApplication rec { - version = "5.4"; + version = "5.5"; name = "getmail-${version}"; namePrefix = ""; src = fetchurl { url = "http://pyropus.ca/software/getmail/old-versions/${name}.tar.gz"; - sha256 = "1iwss9z94p165gxr2yw7s9q12a0bn71fcdbikzkykr5s7xxnz2ds"; + sha256 = "0l43lbnrnyyrq8mlnw37saq6v0mh3nkirdq1dwnsrihykzjjwf70"; }; doCheck = false; diff --git a/pkgs/tools/networking/gupnp-tools/default.nix b/pkgs/tools/networking/gupnp-tools/default.nix index fcbf5a4e1b2a..e008c9183c98 100644 --- a/pkgs/tools/networking/gupnp-tools/default.nix +++ b/pkgs/tools/networking/gupnp-tools/default.nix @@ -1,4 +1,4 @@ -{fetchurl, stdenv, gupnp, gssdp, pkgconfig, gtk3, libuuid, intltool, gupnp_av, gnome3, gnome2, makeWrapper}: +{fetchurl, stdenv, gupnp, gssdp, pkgconfig, gtk3, libuuid, intltool, gupnp-av, gnome3, gnome2, makeWrapper}: stdenv.mkDerivation rec { name = "gupnp-tools-${version}"; @@ -10,13 +10,13 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [gupnp libuuid gssdp gtk3 intltool gupnp_av + buildInputs = [gupnp libuuid gssdp gtk3 intltool gupnp-av gnome2.gnome_icon_theme makeWrapper]; postInstall = '' for program in gupnp-av-cp gupnp-universal-cp; do wrapProgram "$out/bin/$program" \ - --prefix XDG_DATA_DIRS : "${gtk3.out}/share:${gnome3.gnome_themes_standard}/share:${gnome2.gnome_icon_theme}/share:$out/share" + --prefix XDG_DATA_DIRS : "${gtk3.out}/share:${gnome3.gnome-themes-standard}/share:${gnome2.gnome_icon_theme}/share:$out/share" done ''; diff --git a/pkgs/tools/networking/httplab/default.nix b/pkgs/tools/networking/httplab/default.nix index fb50ddc9eb4e..8ec0ce2847dd 100644 --- a/pkgs/tools/networking/httplab/default.nix +++ b/pkgs/tools/networking/httplab/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { name = "httplab-${version}"; - version = "0.1.0"; + version = "0.3.0"; rev = "v${version}"; goPackagePath = "github.com/gchaincl/httplab"; @@ -11,7 +11,7 @@ buildGoPackage rec { owner = "gchaincl"; repo = "httplab"; inherit rev; - sha256 = "19d0aasaxayvw25m9n2gahyq590dwym7k0fng8pqvrgc2mpl0ncw"; + sha256 = "1q9rp43z59nryfm79gci5a1gmqw552rqd4cki81rymbj3f6xvrf9"; }; meta = with stdenv.lib; { diff --git a/pkgs/tools/networking/iperf/3.nix b/pkgs/tools/networking/iperf/3.nix index 8b7187f07c76..28b53a8c2477 100644 --- a/pkgs/tools/networking/iperf/3.nix +++ b/pkgs/tools/networking/iperf/3.nix @@ -10,22 +10,13 @@ stdenv.mkDerivation rec { buildInputs = [ openssl ]; - preConfigure = stdenv.lib.optionalString stdenv.hostPlatform.isMusl '' - NIX_CFLAGS_COMPILE+=" -D_GNU_SOURCE" - ''; - patches = stdenv.lib.optionals stdenv.hostPlatform.isMusl [ - (fetchpatch { - url = "http://git.alpinelinux.org/cgit/aports/plain/main/iperf3/build-fixes.patch"; - name = "fix-musl-build.patch"; - sha256 = "0zvfjnqdldh6rc6qggyb310swdnl9qk0m3z1kklnqzgjsh8dskvl"; - }) (fetchpatch { url = "http://git.alpinelinux.org/cgit/aports/plain/main/iperf3/remove-pg-flags.patch"; name = "remove-pg-flags.patch"; sha256 = "0lnczhass24kgq59drgdipnhjnw4l1cy6gqza7f2ah1qr4q104rm"; }) -]; + ]; postInstall = '' ln -s iperf3 $out/bin/iperf diff --git a/pkgs/tools/networking/keepalived/default.nix b/pkgs/tools/networking/keepalived/default.nix index 140ea6860fc3..185e86366815 100644 --- a/pkgs/tools/networking/keepalived/default.nix +++ b/pkgs/tools/networking/keepalived/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "keepalived-${version}"; - version = "1.4.1"; + version = "1.4.2"; src = fetchFromGitHub { owner = "acassen"; repo = "keepalived"; rev = "v${version}"; - sha256 = "1d3jnfhj9mpnc27wvgsiz2vr4lnvvccw3v128z16jpyibyv20ph0"; + sha256 = "154yxs6kwpi9yc4pa45ba3z3bfwzgmmmja5nk3d9mxq6w6s1swcy"; }; buildInputs = [ diff --git a/pkgs/tools/networking/megatools/default.nix b/pkgs/tools/networking/megatools/default.nix index a59aee83b939..f6a750112870 100644 --- a/pkgs/tools/networking/megatools/default.nix +++ b/pkgs/tools/networking/megatools/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, glib, fuse, curl, glib_networking +{ stdenv, fetchurl, pkgconfig, glib, fuse, curl, glib-networking , asciidoc, wrapGAppsHook }: stdenv.mkDerivation rec { @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig wrapGAppsHook asciidoc ]; - buildInputs = [ glib glib_networking fuse curl ]; + buildInputs = [ glib glib-networking fuse curl ]; meta = with stdenv.lib; { description = "Command line client for Mega.co.nz"; diff --git a/pkgs/tools/networking/minissdpd/default.nix b/pkgs/tools/networking/minissdpd/default.nix index e81297e6dd82..a451750503ab 100644 --- a/pkgs/tools/networking/minissdpd/default.nix +++ b/pkgs/tools/networking/minissdpd/default.nix @@ -2,10 +2,10 @@ stdenv.mkDerivation rec { name = "minissdpd-${version}"; - version = "1.5.20160301"; + version = "1.5.20180203"; src = fetchurl { - sha256 = "053icnb25jg2vvjxirkznks3ipbbdjxac278y19rk2w9cirgi9lv"; + sha256 = "1yiri887s8wxh4zrjc5dw19gyypqg63962aimcgd19blvpbwnfcv"; url = "http://miniupnp.free.fr/files/download.php?file=${name}.tar.gz"; name = "${name}.tar.gz"; }; diff --git a/pkgs/tools/networking/miniupnpd/default.nix b/pkgs/tools/networking/miniupnpd/default.nix index a623b9fbfe9d..1e0200794305 100644 --- a/pkgs/tools/networking/miniupnpd/default.nix +++ b/pkgs/tools/networking/miniupnpd/default.nix @@ -3,11 +3,11 @@ assert stdenv.isLinux; stdenv.mkDerivation rec { - name = "miniupnpd-2.0.20171212"; + name = "miniupnpd-2.0.20180203"; src = fetchurl { url = "http://miniupnp.free.fr/files/download.php?file=${name}.tar.gz"; - sha256 = "0jdcll1nd8jf356fpl0n2yw8sww58nfz6hkx052d77l34afq6sn7"; + sha256 = "1djb0w76yd5jyqm5mzmxlxikxzzwqzjgy75h8saxc3rlz3r1a346"; name = "${name}.tar.gz"; }; diff --git a/pkgs/tools/networking/mitmproxy/default.nix b/pkgs/tools/networking/mitmproxy/default.nix index 131021704a22..c969119e1d76 100644 --- a/pkgs/tools/networking/mitmproxy/default.nix +++ b/pkgs/tools/networking/mitmproxy/default.nix @@ -1,60 +1,47 @@ -{ stdenv, fetchpatch, fetchFromGitHub, fetchurl, python3, glibcLocales }: +{ stdenv, fetchFromGitHub, python3Packages, glibcLocales }: -let - # When overrides are not needed, then only remove the contents of this set. - packageOverrides = self: super: { - ldap3 = super.ldap3.overridePythonAttrs (oldAttrs: rec { - version = "2.3"; - src = oldAttrs.src.override { - inherit version; - sha256 = "c056b3756076e15aa71c963c7c5a44d5d9bbd430263ee49598d4454223a766ac"; - }; - }); - pyasn1 = super.pyasn1.overridePythonAttrs (oldAttrs: rec { - version = "0.3.7"; - src = oldAttrs.src.override { - inherit version; - sha256 = "187f2a66d617683f8e82d5c00033b7c8a0287e1da88a9d577aebec321cad4965"; - }; - }); - }; - - pythonPackages = (python3.override {inherit packageOverrides; }).pkgs; -in with pythonPackages; +with python3Packages; buildPythonPackage rec { - baseName = "mitmproxy"; - name = "${baseName}-unstable-2017-10-31"; + pname = "mitmproxy"; + version = "3.0.2"; src = fetchFromGitHub { - owner = baseName; - repo = baseName; - rev = "80a8eaa708ea31dd9c5e7e1ab6b02c69079039c0"; + owner = pname; + repo = pname; + rev = "v${version}"; sha256 = "0rvwm11yryzlp3c1i42rk2iv1m38yn6r83k41jb51hwg6wzbwzvw"; }; + postPatch = '' + # remove dependency constraints + sed 's/>=\([0-9]\.\?\)\+\( \?, \?<\([0-9]\.\?\)\+\)\?//' -i setup.py + ''; + checkPhase = '' export HOME=$(mktemp -d) + export LC_CTYPE=en_US.UTF-8 # test_echo resolves hostnames - LC_CTYPE=en_US.UTF-8 pytest -k 'not test_echo and not test_find_unclaimed_URLs ' + pytest -k 'not test_echo and not test_find_unclaimed_URLs ' ''; propagatedBuildInputs = [ blinker click certifi cryptography - h2 hyperframe - kaitaistruct passlib pyasn1 pyopenssl - pyparsing pyperclip requests ruamel_yaml tornado - urwid brotlipy sortedcontainers ldap3 + h2 hyperframe kaitaistruct passlib + pyasn1 pyopenssl pyparsing pyperclip + requests ruamel_yaml tornado urwid + brotlipy sortedcontainers ldap3 ]; buildInputs = [ - beautifulsoup4 flask pytest pytestrunner glibcLocales + beautifulsoup4 flask pytest + pytestrunner glibcLocales ]; meta = with stdenv.lib; { description = "Man-in-the-middle proxy"; - homepage = https://mitmproxy.org/; - license = licenses.mit; + homepage = https://mitmproxy.org/; + license = licenses.mit; maintainers = with maintainers; [ fpletz kamilchm ]; }; } diff --git a/pkgs/tools/networking/mitmproxy/tornado-4.6.patch b/pkgs/tools/networking/mitmproxy/tornado-4.6.patch deleted file mode 100644 index 879b8a4c3794..000000000000 --- a/pkgs/tools/networking/mitmproxy/tornado-4.6.patch +++ /dev/null @@ -1,11 +0,0 @@ ---- mitmproxy-v2.0.2-src.org/setup.py 2017-08-28 07:31:51.727424688 +0100 -+++ mitmproxy-v2.0.2-src/setup.py 2017-08-28 07:35:55.608919302 +0100 -@@ -78,7 +78,7 @@ - "pyperclip>=1.5.22, <1.6", - "requests>=2.9.1, <3", - "ruamel.yaml>=0.13.2, <0.14", -- "tornado>=4.3, <4.5", -+ "tornado>=4.3, <4.6", - "urwid>=1.3.1, <1.4", - "watchdog>=0.8.3, <0.9", - "brotlipy>=0.5.1, <0.7", diff --git a/pkgs/tools/networking/modemmanager/default.nix b/pkgs/tools/networking/modemmanager/default.nix index 36c56ac98477..f4631d39b010 100644 --- a/pkgs/tools/networking/modemmanager/default.nix +++ b/pkgs/tools/networking/modemmanager/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, udev, libgudev, polkit, dbus_glib, ppp, intltool, pkgconfig +{ stdenv, fetchurl, udev, libgudev, polkit, dbus-glib, ppp, intltool, pkgconfig , libmbim, libqmi, systemd }: stdenv.mkDerivation rec { @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ intltool pkgconfig ]; - buildInputs = [ udev libgudev polkit dbus_glib ppp libmbim libqmi systemd ]; + buildInputs = [ udev libgudev polkit dbus-glib ppp libmbim libqmi systemd ]; configureFlags = [ "--with-polkit" diff --git a/pkgs/tools/networking/netsniff-ng/default.nix b/pkgs/tools/networking/netsniff-ng/default.nix index aca7643e7ac3..60f7b647eea5 100644 --- a/pkgs/tools/networking/netsniff-ng/default.nix +++ b/pkgs/tools/networking/netsniff-ng/default.nix @@ -4,14 +4,14 @@ stdenv.mkDerivation rec { name = "netsniff-ng-${version}"; - version = "0.6.3"; + version = "0.6.4"; # Upstream recommends and supports git src = fetchFromGitHub rec { repo = "netsniff-ng"; owner = repo; rev = "v${version}"; - sha256 = "0g3105c5ha897bpwsnrp72gx4n61gspxmld594i37g8k7vwzny4l"; + sha256 = "0nip1gmzxq5kak41n0y0qzbhk2876fypk83q14ssy32fk49lxjly"; }; patches = [ ./glibc-2.26.patch ]; diff --git a/pkgs/tools/networking/network-manager-applet/default.nix b/pkgs/tools/networking/network-manager-applet/default.nix index f2c0bb13afe8..20bab09c2a76 100644 --- a/pkgs/tools/networking/network-manager-applet/default.nix +++ b/pkgs/tools/networking/network-manager-applet/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, intltool, pkgconfig, libglade, networkmanager, gnome3 , libnotify, libsecret, polkit, isocodes, modemmanager -, mobile_broadband_provider_info, glib_networking, gsettings_desktop_schemas -, udev, libgudev, hicolor_icon_theme, jansson, wrapGAppsHook, webkitgtk +, mobile-broadband-provider-info, glib-networking, gsettings-desktop-schemas +, udev, libgudev, hicolor-icon-theme, jansson, wrapGAppsHook, webkitgtk , libindicator-gtk3, libappindicator-gtk3, withGnome ? false }: stdenv.mkDerivation rec { @@ -24,18 +24,18 @@ stdenv.mkDerivation rec { outputs = [ "out" "dev" ]; buildInputs = [ - gnome3.gtk libglade networkmanager libnotify libsecret gsettings_desktop_schemas - polkit isocodes udev libgudev gnome3.libgnome_keyring - modemmanager jansson glib_networking + gnome3.gtk libglade networkmanager libnotify libsecret gsettings-desktop-schemas + polkit isocodes udev libgudev gnome3.libgnome-keyring + modemmanager jansson glib-networking libindicator-gtk3 libappindicator-gtk3 ] ++ stdenv.lib.optional withGnome webkitgtk; nativeBuildInputs = [ intltool pkgconfig wrapGAppsHook ]; - propagatedUserEnvPkgs = [ gnome3.gnome_keyring hicolor_icon_theme ]; + propagatedUserEnvPkgs = [ gnome3.gnome-keyring hicolor-icon-theme ]; makeFlags = [ - ''CFLAGS=-DMOBILE_BROADBAND_PROVIDER_INFO=\"${mobile_broadband_provider_info}/share/mobile-broadband-provider-info/serviceproviders.xml\"'' + ''CFLAGS=-DMOBILE_BROADBAND_PROVIDER_INFO=\"${mobile-broadband-provider-info}/share/mobile-broadband-provider-info/serviceproviders.xml\"'' ]; preInstall = '' diff --git a/pkgs/tools/networking/network-manager/0.9.8/default.nix b/pkgs/tools/networking/network-manager/0.9.8/default.nix index 0c791631daa4..c5613341aab1 100644 --- a/pkgs/tools/networking/network-manager/0.9.8/default.nix +++ b/pkgs/tools/networking/network-manager/0.9.8/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, intltool, pkgconfig, dbus_glib +{ stdenv, fetchurl, intltool, pkgconfig, dbus-glib , udev, libnl, libuuid, gnutls, dhcp , libgcrypt, perl, libgudev, avahi, ppp, kmod }: @@ -41,7 +41,7 @@ stdenv.mkDerivation rec { buildInputs = [ udev libnl libuuid gnutls libgcrypt libgudev ]; - propagatedBuildInputs = [ dbus_glib ]; + propagatedBuildInputs = [ dbus-glib ]; nativeBuildInputs = [ intltool pkgconfig ]; diff --git a/pkgs/tools/networking/network-manager/default.nix b/pkgs/tools/networking/network-manager/default.nix index b6201e308d9a..c04716019175 100644 --- a/pkgs/tools/networking/network-manager/default.nix +++ b/pkgs/tools/networking/network-manager/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, intltool, pkgconfig, dbus_glib +{ stdenv, fetchurl, intltool, pkgconfig, dbus-glib , systemd, libgudev, libnl, libuuid, polkit, gnutls, ppp, dhcp, iptables , libgcrypt, dnsmasq, bluez5, readline , gobjectIntrospection, modemmanager, openresolv, libndp, newt, libsoup @@ -81,7 +81,7 @@ stdenv.mkDerivation rec { buildInputs = [ systemd libgudev libnl libuuid polkit ppp libndp curl bluez5 dnsmasq gobjectIntrospection modemmanager readline newt libsoup jansson ]; - propagatedBuildInputs = [ dbus_glib gnutls libgcrypt python3Packages.pygobject3 ]; + propagatedBuildInputs = [ dbus-glib gnutls libgcrypt python3Packages.pygobject3 ]; nativeBuildInputs = [ autoreconfHook intltool pkgconfig libxslt docbook_xsl ]; diff --git a/pkgs/tools/networking/network-manager/fortisslvpn.nix b/pkgs/tools/networking/network-manager/fortisslvpn.nix index 864af033a399..5f1e0790b0b6 100644 --- a/pkgs/tools/networking/network-manager/fortisslvpn.nix +++ b/pkgs/tools/networking/network-manager/fortisslvpn.nix @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { }; buildInputs = [ openfortivpn networkmanager ppp libtool libsecret ] - ++ stdenv.lib.optionals withGnome [ gnome3.gtk gnome3.libgnome_keyring gnome3.gconf gnome3.networkmanagerapplet ]; + ++ stdenv.lib.optionals withGnome [ gnome3.gtk gnome3.libgnome-keyring gnome3.gconf gnome3.networkmanagerapplet ]; nativeBuildInputs = [ automake autoconf intltool pkgconfig ]; diff --git a/pkgs/tools/networking/network-manager/iodine.nix b/pkgs/tools/networking/network-manager/iodine.nix index 0cfc8bbba7db..9e6ba581a946 100644 --- a/pkgs/tools/networking/network-manager/iodine.nix +++ b/pkgs/tools/networking/network-manager/iodine.nix @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { }; buildInputs = [ iodine networkmanager libsecret ] - ++ stdenv.lib.optionals withGnome [ gnome3.gtk gnome3.libgnome_keyring + ++ stdenv.lib.optionals withGnome [ gnome3.gtk gnome3.libgnome-keyring gnome3.networkmanagerapplet ]; nativeBuildInputs = [ intltool pkgconfig ]; diff --git a/pkgs/tools/networking/network-manager/l2tp.nix b/pkgs/tools/networking/network-manager/l2tp.nix index b40afa605e3b..e5626dee1d4d 100644 --- a/pkgs/tools/networking/network-manager/l2tp.nix +++ b/pkgs/tools/networking/network-manager/l2tp.nix @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { }; buildInputs = [ networkmanager ppp libsecret ] - ++ stdenv.lib.optionals withGnome [ gnome3.gtk gnome3.libgnome_keyring networkmanagerapplet ]; + ++ stdenv.lib.optionals withGnome [ gnome3.gtk gnome3.libgnome-keyring networkmanagerapplet ]; nativeBuildInputs = [ autoreconfHook libtool intltool pkgconfig ]; diff --git a/pkgs/tools/networking/network-manager/openconnect.nix b/pkgs/tools/networking/network-manager/openconnect.nix index e1a5f954986f..5a215529d831 100644 --- a/pkgs/tools/networking/network-manager/openconnect.nix +++ b/pkgs/tools/networking/network-manager/openconnect.nix @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { }; buildInputs = [ openconnect networkmanager libsecret ] - ++ stdenv.lib.optionals withGnome [ gnome3.gtk gnome3.libgnome_keyring gnome3.gconf ]; + ++ stdenv.lib.optionals withGnome [ gnome3.gtk gnome3.libgnome-keyring gnome3.gconf ]; nativeBuildInputs = [ intltool pkgconfig ]; diff --git a/pkgs/tools/networking/network-manager/openvpn.nix b/pkgs/tools/networking/network-manager/openvpn.nix index 47dca561d6cb..49411f778456 100644 --- a/pkgs/tools/networking/network-manager/openvpn.nix +++ b/pkgs/tools/networking/network-manager/openvpn.nix @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { }; buildInputs = [ openvpn networkmanager libsecret ] - ++ stdenv.lib.optionals withGnome [ gnome3.gtk gnome3.libgnome_keyring + ++ stdenv.lib.optionals withGnome [ gnome3.gtk gnome3.libgnome-keyring gnome3.networkmanagerapplet ]; nativeBuildInputs = [ intltool pkgconfig ]; diff --git a/pkgs/tools/networking/network-manager/pptp.nix b/pkgs/tools/networking/network-manager/pptp.nix index 6cc8107f2c89..08f591b117e3 100644 --- a/pkgs/tools/networking/network-manager/pptp.nix +++ b/pkgs/tools/networking/network-manager/pptp.nix @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { }; buildInputs = [ networkmanager pptp ppp libsecret ] - ++ stdenv.lib.optionals withGnome [ gnome3.gtk gnome3.libgnome_keyring + ++ stdenv.lib.optionals withGnome [ gnome3.gtk gnome3.libgnome-keyring gnome3.networkmanagerapplet ]; nativeBuildInputs = [ intltool pkgconfig ]; diff --git a/pkgs/tools/networking/network-manager/strongswan.nix b/pkgs/tools/networking/network-manager/strongswan.nix index 365aec88a7d6..4fc9c904f5f9 100644 --- a/pkgs/tools/networking/network-manager/strongswan.nix +++ b/pkgs/tools/networking/network-manager/strongswan.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, intltool, pkgconfig, networkmanager, strongswanNM, procps -, gnome3, libgnome_keyring, libsecret }: +, gnome3, libgnome-keyring, libsecret }: stdenv.mkDerivation rec { name = "${pname}-${version}"; @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { ''; buildInputs = [ networkmanager strongswanNM libsecret ] - ++ (with gnome3; [ gtk libgnome_keyring networkmanagerapplet ]); + ++ (with gnome3; [ gtk libgnome-keyring networkmanagerapplet ]); nativeBuildInputs = [ intltool pkgconfig ]; diff --git a/pkgs/tools/networking/network-manager/vpnc.nix b/pkgs/tools/networking/network-manager/vpnc.nix index 44233b351290..8d69415313d9 100644 --- a/pkgs/tools/networking/network-manager/vpnc.nix +++ b/pkgs/tools/networking/network-manager/vpnc.nix @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { }; buildInputs = [ vpnc networkmanager libsecret ] - ++ stdenv.lib.optionals withGnome [ gnome3.gtk gnome3.libgnome_keyring + ++ stdenv.lib.optionals withGnome [ gnome3.gtk gnome3.libgnome-keyring gnome3.networkmanagerapplet ]; nativeBuildInputs = [ intltool pkgconfig ]; diff --git a/pkgs/tools/networking/nfdump/default.nix b/pkgs/tools/networking/nfdump/default.nix index f7a04eff0461..7af852095124 100644 --- a/pkgs/tools/networking/nfdump/default.nix +++ b/pkgs/tools/networking/nfdump/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchFromGitHub, bzip2, yacc, flex }: -let version = "1.6.15"; in +let version = "1.6.16"; in stdenv.mkDerivation rec { name = "nfdump-${version}"; @@ -9,7 +9,7 @@ stdenv.mkDerivation rec { owner = "phaag"; repo = "nfdump"; rev = "v${version}"; - sha256 = "07grsfkfjy05yfqfcmgp5xpavpck9ps6q7x8x8j79fym5d8gwak5"; + sha256 = "0dgrzf9m4rg5ygibjw21gjdm9am3570wys7wdh5k16nsnyai1gqm"; }; nativeBuildInputs = [yacc flex]; diff --git a/pkgs/tools/networking/ntopng/default.nix b/pkgs/tools/networking/ntopng/default.nix index d1a90d9d1aad..b307a8f6f131 100644 --- a/pkgs/tools/networking/ntopng/default.nix +++ b/pkgs/tools/networking/ntopng/default.nix @@ -53,6 +53,8 @@ stdenv.mkDerivation rec { sed 's|LIBS += -lstdc++.6||' -i Makefile ''; + NIX_CFLAGS_COMPILE = [ "-fpermissive" ]; + meta = with stdenv.lib; { description = "High-speed web-based traffic analysis and flow collection tool"; homepage = http://www.ntop.org/products/ntop/; diff --git a/pkgs/tools/networking/openntpd/default.nix b/pkgs/tools/networking/openntpd/default.nix index d63df830d0e6..a540120de2f9 100644 --- a/pkgs/tools/networking/openntpd/default.nix +++ b/pkgs/tools/networking/openntpd/default.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { name = "openntpd-${version}"; - version = "6.2p1"; + version = "6.2p3"; src = fetchurl { url = "mirror://openbsd/OpenNTPD/${name}.tar.gz"; - sha256 = "1g6hi03ylhv47sbar3xxgsrar8schqfwn4glckh6m6lni67ndq85"; + sha256 = "0fn12i4kzsi0zkr4qp3dp9bycmirnfapajqvdfx02zhr4hanj0kv"; }; prePatch = '' diff --git a/pkgs/tools/networking/opensm/default.nix b/pkgs/tools/networking/opensm/default.nix new file mode 100644 index 000000000000..a053c82a8264 --- /dev/null +++ b/pkgs/tools/networking/opensm/default.nix @@ -0,0 +1,26 @@ +{ stdenv, fetchgit, autoconf, automake, libtool, bison, flex, rdma-core }: + +stdenv.mkDerivation rec { + name = "opensm-${version}"; + version = "3.3.20"; + + src = fetchgit { + url = git://git.openfabrics.org/~halr/opensm.git; + rev = name; + sha256 = "1hlrn5z32yd4w8bj4z6bsfv84pk178s4rnppbabyjqv1rg3c58wl"; + }; + + nativeBuildInputs = [ autoconf automake libtool bison flex ]; + + buildInputs = [ rdma-core ]; + + preConfigure = "bash ./autogen.sh"; + + meta = with stdenv.lib; { + description = "Infiniband subnet manager"; + homepage = https://www.openfabrics.org/; + license = licenses.gpl2; # dual licensed as 2-clause BSD + maintainers = [ maintainers.aij ]; + platforms = [ "x86_64-linux" ]; + }; +} diff --git a/pkgs/tools/networking/pcapfix/default.nix b/pkgs/tools/networking/pcapfix/default.nix index ee47a6cb2ea1..98113551c0cc 100644 --- a/pkgs/tools/networking/pcapfix/default.nix +++ b/pkgs/tools/networking/pcapfix/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl }: stdenv.mkDerivation rec { - name = "pcapfix-1.1.0"; + name = "pcapfix-1.1.1"; src = fetchurl { url = "https://f00l.de/pcapfix/${name}.tar.gz"; - sha256 = "025jpsqav9wg9lql7jfpd67z1113j8gzmjc5nqf5q07b01nnpfgj"; + sha256 = "07dfgl99iv88mgpnpfcb9y7h0zjq9fcf4sp5s7d0d3d5a5sshjay"; }; postPatch = ''sed -i "s|/usr|$out|" Makefile''; diff --git a/pkgs/tools/networking/ripmime/default.nix b/pkgs/tools/networking/ripmime/default.nix index 2a72a530cab9..37f542319dad 100644 --- a/pkgs/tools/networking/ripmime/default.nix +++ b/pkgs/tools/networking/ripmime/default.nix @@ -14,6 +14,8 @@ stdenv.mkDerivation rec { mkdir -p "$out/bin" "$out/share/man/man1" ''; + NIX_CFLAGS_COMPILE=" -Wno-error "; + meta = with stdenv.lib; { description = "Attachment extractor for MIME messages"; maintainers = with maintainers; [ raskin ]; diff --git a/pkgs/tools/networking/speedtest-cli/default.nix b/pkgs/tools/networking/speedtest-cli/default.nix index 592a173df7e8..ad3c3a806b33 100644 --- a/pkgs/tools/networking/speedtest-cli/default.nix +++ b/pkgs/tools/networking/speedtest-cli/default.nix @@ -2,13 +2,13 @@ pythonPackages.buildPythonApplication rec { name = "speedtest-cli-${version}"; - version = "1.0.6"; + version = "2.0.0"; src = fetchFromGitHub { owner = "sivel"; repo = "speedtest-cli"; rev = "v${version}"; - sha256 = "008a0wymn06h93gdkxwlgxg8039ybdni96i4blhpayj52jkbflnv"; + sha256 = "06fini7bqf5paphp8dpck1zpmb33cdxlf4hg6xg2g9k4bdm2k26d"; }; meta = with stdenv.lib; { diff --git a/pkgs/tools/networking/srelay/default.nix b/pkgs/tools/networking/srelay/default.nix index 8c413174cfb2..a3f08cb5a077 100644 --- a/pkgs/tools/networking/srelay/default.nix +++ b/pkgs/tools/networking/srelay/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, openssl }: stdenv.mkDerivation rec { - name = "srelay-0.4.8b6"; + name = "srelay-0.4.8"; src = fetchurl { - url = "mirror://sourceforge/project/socks-relay/socks-relay/srelay-0.4.8/srelay-0.4.8b6.tar.gz"; - sha256 = "1az9ds10hpmpw6bqk7fcd1w70001kz0mm48v3vgg2z6vrbmgn0qj"; + url = "mirror://sourceforge/project/socks-relay/socks-relay/srelay-0.4.8/srelay-0.4.8.tar.gz"; + sha256 = "1sn6005aqyfvrlkm5445cyyaj6h6wfyskfncfmds55x34hfyxpvl"; }; patches = [ ./arm.patch ]; diff --git a/pkgs/tools/networking/strongswan/default.nix b/pkgs/tools/networking/strongswan/default.nix index eff498a174eb..3cbff4f25ae8 100644 --- a/pkgs/tools/networking/strongswan/default.nix +++ b/pkgs/tools/networking/strongswan/default.nix @@ -12,11 +12,11 @@ with stdenv.lib; stdenv.mkDerivation rec { name = "strongswan-${version}"; - version = "5.6.1"; + version = "5.6.2"; src = fetchurl { url = "http://download.strongswan.org/${name}.tar.bz2"; - sha256 = "0lxbyiary8iapx3ysw40czrmxf983fhfzs5mvz2hk1j1mpc85hp0"; + sha256 = "14ifqay54brw2b2hbmm517bxw8bs9631d7jm4g139igkxcq0m9p0"; }; dontPatchELF = true; diff --git a/pkgs/tools/networking/surfraw/default.nix b/pkgs/tools/networking/surfraw/default.nix index 8624efeb3f77..b23616c57e92 100644 --- a/pkgs/tools/networking/surfraw/default.nix +++ b/pkgs/tools/networking/surfraw/default.nix @@ -1,11 +1,11 @@ {stdenv, fetchurl, perl}: stdenv.mkDerivation rec { - name = "surfraw-2.2.9"; + name = "surfraw-2.3.0"; src = fetchurl { - url = "http://surfraw.alioth.debian.org/dist/surfraw-2.2.9.tar.gz"; - sha256 = "1fy4ph5h9kp0jzj1m6pfylxnnmgdk0mmdppw76z9jhna4jndk5xa"; + url = "http://surfraw.alioth.debian.org/dist/surfraw-2.3.0.tar.gz"; + sha256 = "099nbif0x5cbcf18snc58nx1a3q7z0v9br9p2jiq9pcc7ic2015d"; }; configureFlags = [ diff --git a/pkgs/tools/networking/swagger-codegen/default.nix b/pkgs/tools/networking/swagger-codegen/default.nix index 0c3af79628e1..4fc456523f7d 100644 --- a/pkgs/tools/networking/swagger-codegen/default.nix +++ b/pkgs/tools/networking/swagger-codegen/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, jre, makeWrapper }: stdenv.mkDerivation rec { - version = "2.2.1"; + version = "2.3.1"; pname = "swagger-codegen"; name = "${pname}-${version}"; @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "https://oss.sonatype.org/content/repositories/releases/io/swagger/${pname}-cli/${version}/${jarfilename}"; - sha256 = "1pwxkl3r93c8hsif9xm0h1hmbjrxz1q7hr5qn5n0sni1x3c3k0d1"; + sha256 = "171qr0zx7i6cykv54vqjf3mplrf7w4a1fpq47wsj861lbf8xm322"; }; phases = [ "installPhase" ]; diff --git a/pkgs/tools/networking/tcpreplay/default.nix b/pkgs/tools/networking/tcpreplay/default.nix index 236faa067ade..11500a51d92a 100644 --- a/pkgs/tools/networking/tcpreplay/default.nix +++ b/pkgs/tools/networking/tcpreplay/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "tcpreplay-${version}"; - version = "4.2.5"; + version = "4.2.6"; src = fetchurl { url = "https://github.com/appneta/tcpreplay/releases/download/v${version}/tcpreplay-${version}.tar.gz"; - sha256 = "1mw9r97blczm70rjf7p83sd1fxpzdzfvsbnjsc0m3nz16jz2c44l"; + sha256 = "07aklkc1s13hwrd098bqj8izfh8kdgs7wl9swcmkxffs6b2mcdq4"; }; buildInputs = [ libpcap ]; diff --git a/pkgs/tools/networking/telepresence/default.nix b/pkgs/tools/networking/telepresence/default.nix index 1f94702e8308..fe728dbbd0ab 100644 --- a/pkgs/tools/networking/telepresence/default.nix +++ b/pkgs/tools/networking/telepresence/default.nix @@ -16,14 +16,14 @@ let }); in stdenv.mkDerivation rec { pname = "telepresence"; - version = "0.65"; + version = "0.67"; name = "${pname}-${version}"; src = fetchFromGitHub { owner = "datawire"; repo = "telepresence"; rev = version; - sha256 = "01hwaybhdmfzmyzvwdx19nc5px2grf4k1vbbj9jdmsh5pmzfrby4"; + sha256 = "1bpyzgvrf43yvhwp5bzkp2qf3z9dhjma165w8ssca9g00v4b5vg9"; }; buildInputs = [ makeWrapper ]; diff --git a/pkgs/tools/networking/tgt/default.nix b/pkgs/tools/networking/tgt/default.nix index 2a6de71a0072..ce9ed7ef53a1 100644 --- a/pkgs/tools/networking/tgt/default.nix +++ b/pkgs/tools/networking/tgt/default.nix @@ -2,7 +2,7 @@ , docbook_xsl }: let - version = "1.0.63"; + version = "1.0.73"; in stdenv.mkDerivation rec { name = "tgt-${version}"; @@ -10,7 +10,7 @@ in stdenv.mkDerivation rec { owner = "fujita"; repo = "tgt"; rev = "v${version}"; - sha256 = "1x3irnbfikdqhlikhwqazg0g0hc1df5r2bp001f13sr0nvw28y1n"; + sha256 = "0alrdrklh5wq8x4xbp30zwnxkp0brx1mjkbp70dhaz0zbzvyydr0"; }; buildInputs = [ libxslt systemd libaio docbook_xsl ]; diff --git a/pkgs/tools/networking/tinc/default.nix b/pkgs/tools/networking/tinc/default.nix index 508816dbfa81..4f6bec9c0084 100644 --- a/pkgs/tools/networking/tinc/default.nix +++ b/pkgs/tools/networking/tinc/default.nix @@ -1,12 +1,12 @@ {stdenv, fetchurl, lzo, openssl, zlib}: stdenv.mkDerivation rec { - version = "1.0.32"; + version = "1.0.33"; name = "tinc-${version}"; src = fetchurl { url = "http://www.tinc-vpn.org/packages/tinc-${version}.tar.gz"; - sha256 = "11smq1h6jyp6x2cwrv2zxck9phzdz3svi95pxnvvpd4dzzm4zcjd"; + sha256 = "1x0hpfz13vn4pl6dcpnls6xq3rfcbdsg90awcfn53ijb8k35svvz"; }; buildInputs = [ lzo openssl zlib ]; diff --git a/pkgs/tools/networking/tlspool/default.nix b/pkgs/tools/networking/tlspool/default.nix index 80bac726457b..02d3f2c29488 100644 --- a/pkgs/tools/networking/tlspool/default.nix +++ b/pkgs/tools/networking/tlspool/default.nix @@ -1,4 +1,4 @@ -{ pkgs, stdenv, fetchFromGitHub, unzip, libtool, pkgconfig, git, p11_kit, +{ pkgs, stdenv, fetchFromGitHub, unzip, libtool, pkgconfig, git, p11-kit, libtasn1, db, openldap, libmemcached, cyrus_sasl, openssl, softhsm, bash, python, libkrb5, quickder, unbound, ldns, gnupg, gnutls-kdh, useSystemd ? true, systemd, swig @@ -18,7 +18,7 @@ stdenv.mkDerivation rec { sha256 = "1qyq6da5bsgb8y9f3jhfrnhbvjns4k80lpkrydkvfx83bg494370"; }; - propagatedBuildInputs = [ python softhsm openldap p11_kit.dev p11_kit.out gnupg ]; + propagatedBuildInputs = [ python softhsm openldap p11-kit.dev p11-kit.out gnupg ]; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ unbound unzip git libtasn1 db libmemcached cyrus_sasl openssl bash quickder libkrb5 ldns libtool swig pkgs.pythonPackages.pip gnutls-kdh ] diff --git a/pkgs/tools/networking/wavemon/default.nix b/pkgs/tools/networking/wavemon/default.nix index 0457c1ce6233..a4c707442345 100644 --- a/pkgs/tools/networking/wavemon/default.nix +++ b/pkgs/tools/networking/wavemon/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchFromGitHub, ncurses, libnl, pkgconfig }: stdenv.mkDerivation rec { - version = "0.8.1"; + version = "0.8.2"; baseName = "wavemon"; name = "${baseName}-${version}"; @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { owner = "uoaerg"; repo = "wavemon"; rev = "v${version}"; - sha256 = "0mx61rzl8a66pmigv2fh75zgdalxx75a5s1b7ydbviz18ihhjyls"; + sha256 = "0rqpp7rhl9rlwnihsapaiy62v33h45fm3d0ia2nhdjw7fwkwcqvs"; }; meta = with stdenv.lib; { diff --git a/pkgs/tools/networking/wrk/default.nix b/pkgs/tools/networking/wrk/default.nix index 05dcf6dc594c..5dd2f3b74fdc 100644 --- a/pkgs/tools/networking/wrk/default.nix +++ b/pkgs/tools/networking/wrk/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "wrk-${version}"; - version = "4.0.2"; + version = "4.1.0"; src = fetchFromGitHub { owner = "wg"; repo = "wrk"; rev = version; - sha256 = "1qg6w8xz4pr227h1gxrbm6ylhqvspk95hvq2f9iakni7s56pkh1w"; + sha256 = "0dblb3qdg8mbgb8iiks0g420pza13npbr33b2xkc5dgv7kcwmvqj"; }; buildInputs = [ luajit openssl perl ]; diff --git a/pkgs/tools/networking/xl2tpd/default.nix b/pkgs/tools/networking/xl2tpd/default.nix index e50f208e95fe..f34b01fb484a 100644 --- a/pkgs/tools/networking/xl2tpd/default.nix +++ b/pkgs/tools/networking/xl2tpd/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "xl2tpd-${version}"; - version = "1.3.10"; + version = "1.3.10.1"; src = fetchFromGitHub { owner = "xelerance"; repo = "xl2tpd"; rev = "v${version}"; - sha256 = "1z8a33hz82nla1342lfxdihssbhw9lzkgavdhl275im5byj8qgkg"; + sha256 = "0rz31bcjl7na89abn9bj5p3dbgqd6q6xsympzki15axxhyy57qan"; }; buildInputs = [ libpcap ]; diff --git a/pkgs/tools/networking/zap/default.nix b/pkgs/tools/networking/zap/default.nix index 6ee463cac136..263a44615305 100644 --- a/pkgs/tools/networking/zap/default.nix +++ b/pkgs/tools/networking/zap/default.nix @@ -2,12 +2,12 @@ stdenv.mkDerivation rec { name = "zap-${version}"; - version = "2.5.0"; + version = "2.7.0"; src = fetchFromGitHub { owner = "zaproxy"; repo = "zaproxy"; rev ="${version}"; - sha256 = "12bd0f2zrs7cvcyy2xj31m3szxrr2ifdjyd24z047qm465z3hj33"; + sha256 = "1bz4pgq66v6kxmgj99llacm1d85vj8z78jlgc2z9hv0ha5i57y32"; }; buildInputs = [ jdk ant ]; diff --git a/pkgs/tools/package-management/disnix/DisnixWebService/default.nix b/pkgs/tools/package-management/disnix/DisnixWebService/default.nix index 152dc7dcc040..f75bf6bf1625 100644 --- a/pkgs/tools/package-management/disnix/DisnixWebService/default.nix +++ b/pkgs/tools/package-management/disnix/DisnixWebService/default.nix @@ -1,10 +1,10 @@ {stdenv, fetchurl, apacheAnt, jdk, axis2, dbus_java}: stdenv.mkDerivation { - name = "DisnixWebService-0.7"; + name = "DisnixWebService-0.8"; src = fetchurl { - url = https://github.com/svanderburg/DisnixWebService/files/842861/DisnixWebService-0.7.tar.gz; - sha256 = "1zqy0badqqw8pzp9ky2aayi27v6znd64zafacvywjrn185fjz17g"; + url = https://github.com/svanderburg/DisnixWebService/files/1756703/DisnixWebService-0.8.tar.gz; + sha256 = "05hmyz17rmqlph0i321kmhabnpw84kqz32lgc5cd4shxyzsal9hz"; }; buildInputs = [ apacheAnt jdk ]; PREFIX = ''''${env.out}''; diff --git a/pkgs/tools/package-management/disnix/default.nix b/pkgs/tools/package-management/disnix/default.nix index 830c576c4062..03831f9b8b87 100644 --- a/pkgs/tools/package-management/disnix/default.nix +++ b/pkgs/tools/package-management/disnix/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, pkgconfig, glib, libxml2, libxslt, getopt, nixUnstable, dysnomia, libintlOrEmpty, libiconv }: stdenv.mkDerivation { - name = "disnix-0.7.2"; + name = "disnix-0.8"; src = fetchurl { - url = https://github.com/svanderburg/disnix/releases/download/disnix-0.7.2/disnix-0.7.2.tar.gz; - sha256 = "1cgf7hgqrwsqgyc77sis0hr7cwgk3vx8cd4msgq11qbwywi3b6id"; + url = https://github.com/svanderburg/disnix/files/1756701/disnix-0.8.tar.gz; + sha256 = "02cmj1jqk5i90szjsn5csr7qb7n42v04rvl9syx0zi9sx9ldnb0w"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/tools/package-management/disnix/disnixos/default.nix b/pkgs/tools/package-management/disnix/disnixos/default.nix index 98d1802f881a..3604d011dec5 100644 --- a/pkgs/tools/package-management/disnix/disnixos/default.nix +++ b/pkgs/tools/package-management/disnix/disnixos/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, dysnomia, disnix, socat, pkgconfig, getopt }: stdenv.mkDerivation { - name = "disnixos-0.6.1"; + name = "disnixos-0.7"; src = fetchurl { - url = https://github.com/svanderburg/disnixos/releases/download/disnixos-0.6.1/disnixos-0.6.1.tar.gz; - sha256 = "0pqv8n9942vjwmb32m1af29fi0vjlsbwkj2c7h1xs28z6wahr7wa"; + url = https://github.com/svanderburg/disnixos/files/1756702/disnixos-0.7.tar.gz; + sha256 = "1qf9h3q1r27vg1ry55lj01knq6i0c213f6vlg7wj958mml7fk37b"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/tools/package-management/disnix/dysnomia/default.nix b/pkgs/tools/package-management/disnix/dysnomia/default.nix index 042d2c314b19..ab0ce5d75216 100644 --- a/pkgs/tools/package-management/disnix/dysnomia/default.nix +++ b/pkgs/tools/package-management/disnix/dysnomia/default.nix @@ -20,10 +20,10 @@ assert enableEjabberdDump -> ejabberd != null; assert enableMongoDatabase -> (mongodb != null && mongodb-tools != null); stdenv.mkDerivation { - name = "dysnomia-0.7.1"; + name = "dysnomia-0.8"; src = fetchurl { - url = https://github.com/svanderburg/dysnomia/files/1576949/dysnomia-0.7.1.tar.gz; - sha256 = "0fyyn6654p10mrm2rlgv017d74wjb8z9h2xzv8gwdly34kifj9dh"; + url = https://github.com/svanderburg/dysnomia/files/1756700/dysnomia-0.8.tar.gz; + sha256 = "0pc4zwmmlsz02a6a4srpwdwhqrfvn3wkn22sz3fg7lwxbdbd5k0z"; }; preConfigure = if enableEjabberdDump then "export PATH=$PATH:${ejabberd}/sbin" else ""; diff --git a/pkgs/tools/package-management/mynewt-newt/default.nix b/pkgs/tools/package-management/mynewt-newt/default.nix index 1b8c1b2f6402..74c2fd59d4e3 100644 --- a/pkgs/tools/package-management/mynewt-newt/default.nix +++ b/pkgs/tools/package-management/mynewt-newt/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { name = "mynewt-newt-${version}"; - version = "1.0.0"; + version = "1.3.0"; goPackagePath = "mynewt.apache.org/newt"; goDeps = ./deps.nix; @@ -11,7 +11,7 @@ buildGoPackage rec { owner = "apache"; repo = "incubator-mynewt-newt"; rev = "mynewt_${builtins.replaceStrings ["."] ["_"] version}_tag"; - sha256 = "1ixqxqizd957prd4j2nijgnkv84rffj8cx5f7aqyjq9nkawjksf6"; + sha256 = "0ia6q1wf3ki2yw8ngw5gnbdrb7268qwi078j05f8gs1sppb3g563"; }; meta = with stdenv.lib; { diff --git a/pkgs/tools/package-management/nix/default.nix b/pkgs/tools/package-management/nix/default.nix index e8eb3050c6d3..06696a41324c 100644 --- a/pkgs/tools/package-management/nix/default.nix +++ b/pkgs/tools/package-management/nix/default.nix @@ -30,7 +30,7 @@ let buildInputs = [ curl openssl sqlite xz bzip2 ] ++ lib.optional (stdenv.isLinux || stdenv.isDarwin) libsodium ++ lib.optionals fromGit [ brotli ] # Since 1.12 - ++ lib.optional (stdenv.isLinux && !hostPlatform.isRiscV) libseccomp + ++ lib.optional (hostPlatform.isSeccomputable) libseccomp ++ lib.optional ((stdenv.isLinux || stdenv.isDarwin) && is20) (aws-sdk-cpp.override { apis = ["s3"]; @@ -57,7 +57,7 @@ let hostPlatform != buildPlatform && hostPlatform ? nix && hostPlatform.nix ? system ) ''--with-system=${hostPlatform.nix.system}'' # RISC-V support in progress https://github.com/seccomp/libseccomp/pull/50 - ++ lib.optional hostPlatform.isRiscV "--disable-seccomp-sandboxing"; + ++ lib.optional (!hostPlatform.isSeccomputable) "--disable-seccomp-sandboxing"; makeFlags = "profiledir=$(out)/etc/profile.d"; diff --git a/pkgs/tools/package-management/nixui/generate.sh b/pkgs/tools/package-management/nixui/generate.sh index e3a7d9f69e4f..c7a93a716731 100755 --- a/pkgs/tools/package-management/nixui/generate.sh +++ b/pkgs/tools/package-management/nixui/generate.sh @@ -1,3 +1,4 @@ -#!/bin/sh -e +#!/usr/bin/env nix-shell +#! nix-shell -i bash -p nodePackages.node2nix -node2nix -i pkg.json -c nixui.nix -e ../../../development/node-packages/node-env.nix --no-copy-node-env +exec node2nix -6 -i pkg.json -c nixui.nix -e ../../../development/node-packages/node-env.nix --no-copy-node-env diff --git a/pkgs/tools/package-management/nixui/nixui.nix b/pkgs/tools/package-management/nixui/nixui.nix index ee4dab5ad64a..ade19b521626 100644 --- a/pkgs/tools/package-management/nixui/nixui.nix +++ b/pkgs/tools/package-management/nixui/nixui.nix @@ -1,8 +1,8 @@ -# This file has been generated by node2nix 1.2.0. Do not edit! +# This file has been generated by node2nix 1.5.1. Do not edit! {pkgs ? import { inherit system; - }, system ? builtins.currentSystem, nodejs ? pkgs."nodejs-4_x"}: + }, system ? builtins.currentSystem, nodejs ? pkgs."nodejs-6_x"}: let nodeEnv = import ../../../development/node-packages/node-env.nix { diff --git a/pkgs/tools/package-management/nixui/node-packages.nix b/pkgs/tools/package-management/nixui/node-packages.nix index cdb2df808041..4973223c0ac3 100644 --- a/pkgs/tools/package-management/nixui/node-packages.nix +++ b/pkgs/tools/package-management/nixui/node-packages.nix @@ -1,36 +1,9 @@ -# This file has been generated by node2nix 1.2.0. Do not edit! +# This file has been generated by node2nix 1.5.1. Do not edit! {nodeEnv, fetchurl, fetchgit, globalBuildInputs ? []}: let sources = { - "isnumber-1.0.0" = { - name = "isnumber"; - packageName = "isnumber"; - version = "1.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/isnumber/-/isnumber-1.0.0.tgz"; - sha1 = "0e3f9759b581d99dd85086f0ec2a74909cfadd01"; - }; - }; - "nedb-1.0.2" = { - name = "nedb"; - packageName = "nedb"; - version = "1.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/nedb/-/nedb-1.0.2.tgz"; - sha1 = "309f10ba29f2002f74a92fb870b8a53ba2131593"; - }; - }; - "underscore-1.8.3" = { - name = "underscore"; - packageName = "underscore"; - version = "1.8.3"; - src = fetchurl { - url = "https://registry.npmjs.org/underscore/-/underscore-1.8.3.tgz"; - sha1 = "4f3fb53b106e6097fcf9cb4109f2a5e9bdfa5022"; - }; - }; "async-0.2.10" = { name = "async"; packageName = "async"; @@ -40,15 +13,6 @@ let sha1 = "b6bbe0b0674b9d719708ca38de8c237cb526c3d1"; }; }; - "underscore-1.4.4" = { - name = "underscore"; - packageName = "underscore"; - version = "1.4.4"; - src = fetchurl { - url = "https://registry.npmjs.org/underscore/-/underscore-1.4.4.tgz"; - sha1 = "61a6a32010622afa07963bf325203cf12239d604"; - }; - }; "binary-search-tree-0.2.4" = { name = "binary-search-tree"; packageName = "binary-search-tree"; @@ -58,6 +22,15 @@ let sha1 = "14fe106366a59ca8efb68c0ae30c36aaff0cd510"; }; }; + "isnumber-1.0.0" = { + name = "isnumber"; + packageName = "isnumber"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/isnumber/-/isnumber-1.0.0.tgz"; + sha1 = "0e3f9759b581d99dd85086f0ec2a74909cfadd01"; + }; + }; "mkdirp-0.3.5" = { name = "mkdirp"; packageName = "mkdirp"; @@ -67,6 +40,33 @@ let sha1 = "de3e5f8961c88c787ee1368df849ac4413eca8d7"; }; }; + "nedb-1.0.2" = { + name = "nedb"; + packageName = "nedb"; + version = "1.0.2"; + src = fetchurl { + url = "https://registry.npmjs.org/nedb/-/nedb-1.0.2.tgz"; + sha1 = "309f10ba29f2002f74a92fb870b8a53ba2131593"; + }; + }; + "underscore-1.4.4" = { + name = "underscore"; + packageName = "underscore"; + version = "1.4.4"; + src = fetchurl { + url = "https://registry.npmjs.org/underscore/-/underscore-1.4.4.tgz"; + sha1 = "61a6a32010622afa07963bf325203cf12239d604"; + }; + }; + "underscore-1.8.3" = { + name = "underscore"; + packageName = "underscore"; + version = "1.8.3"; + src = fetchurl { + url = "https://registry.npmjs.org/underscore/-/underscore-1.8.3.tgz"; + sha1 = "4f3fb53b106e6097fcf9cb4109f2a5e9bdfa5022"; + }; + }; }; in { @@ -80,13 +80,13 @@ in sha256 = "2a2b1dcd9201e306242688c6c86f520ac47ef5de841ae0d7ea6ae8ff2889c3ab"; }; dependencies = [ + sources."async-0.2.10" + sources."binary-search-tree-0.2.4" sources."isnumber-1.0.0" + sources."mkdirp-0.3.5" (sources."nedb-1.0.2" // { dependencies = [ - sources."async-0.2.10" sources."underscore-1.4.4" - sources."binary-search-tree-0.2.4" - sources."mkdirp-0.3.5" ]; }) sources."underscore-1.8.3" @@ -98,5 +98,6 @@ in license = "Apache-2.0"; }; production = true; + bypassCache = false; }; } \ No newline at end of file diff --git a/pkgs/tools/package-management/packagekit/default.nix b/pkgs/tools/package-management/packagekit/default.nix index 78ef19706d18..cdc035072daf 100644 --- a/pkgs/tools/package-management/packagekit/default.nix +++ b/pkgs/tools/package-management/packagekit/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchFromGitHub, lib , intltool, glib, pkgconfig, polkit, python, sqlite, systemd -, gobjectIntrospection, vala_0_38, gtk_doc, autoreconfHook, autoconf-archive +, gobjectIntrospection, vala_0_38, gtk-doc, autoreconfHook, autoconf-archive # TODO: set enableNixBackend to true, as soon as it builds , nix, enableNixBackend ? false, boost , enableCommandNotFound ? false @@ -8,19 +8,19 @@ stdenv.mkDerivation rec { name = "packagekit-${version}"; - version = "1.1.7"; + version = "1.1.8"; src = fetchFromGitHub { owner = "hughsie"; repo = "PackageKit"; rev = "PACKAGEKIT_${lib.replaceStrings ["."] ["_"] version}"; - sha256 = "076rrczmyhapj87pxqldsar5pbz4mid6cm9l1n91zh2q403chdkb"; + sha256 = "0bn9flsjbzlwmlbv2gphqwgzy9sx8ahch28z6dzgak4csbz5wcws"; }; buildInputs = [ glib polkit systemd python gobjectIntrospection vala_0_38 ] ++ lib.optional enableBashCompletion bash-completion; propagatedBuildInputs = [ sqlite nix boost ]; - nativeBuildInputs = [ intltool pkgconfig autoreconfHook autoconf-archive gtk_doc ]; + nativeBuildInputs = [ intltool pkgconfig autoreconfHook autoconf-archive gtk-doc ]; preAutoreconf = '' gtkdocize diff --git a/pkgs/tools/package-management/packagekit/qt.nix b/pkgs/tools/package-management/packagekit/qt.nix new file mode 100644 index 000000000000..c38ef25f3548 --- /dev/null +++ b/pkgs/tools/package-management/packagekit/qt.nix @@ -0,0 +1,24 @@ +{ stdenv, lib, fetchFromGitHub, cmake, pkgconfig +, qtbase, qttools, packagekit }: + +stdenv.mkDerivation rec { + name = "packagekit-qt-${version}"; + version = "1.0.1"; + + src = fetchFromGitHub { + owner = "hughsie"; + repo = "PackageKit-Qt"; + rev = "v${version}"; + sha256 = "1ls6mn9abpwzw5wjgmslc5h9happj3516y1q67imppczk8g9h2yk"; + }; + + buildInputs = [ packagekit ]; + + nativeBuildInputs = [ cmake pkgconfig qttools ]; + + enableParallelBuilding = true; + + meta = packagekit.meta // { + description = "System to facilitate installing and updating packages - Qt"; + }; +} diff --git a/pkgs/tools/package-management/pacman/default.nix b/pkgs/tools/package-management/pacman/default.nix new file mode 100644 index 000000000000..cdee8c15d8b5 --- /dev/null +++ b/pkgs/tools/package-management/pacman/default.nix @@ -0,0 +1,26 @@ +{ stdenv, lib, fetchurl, autoreconfHook, pkgconfig, perl, libarchive, openssl, +zlib, bzip2, lzma }: + +stdenv.mkDerivation rec { + name = "pacman-${version}"; + version = "5.0.2"; + + src = fetchurl { + url = "https://git.archlinux.org/pacman.git/snapshot/pacman-${version}.tar.gz"; + sha256 = "1lk54k7d281v55fryqsajl4xav7rhpk8x8pxcms2v6dapp959hgi"; + }; + + # trying to build docs fails with a2x errors, unable to fix through asciidoc + configureFlags = [ "--disable-doc" ]; + + nativeBuildInputs = [ autoreconfHook pkgconfig ]; + buildInputs = [ perl libarchive openssl zlib bzip2 lzma ]; + + meta = with lib; { + description = "A simple library-based package manager"; + homepage = https://www.archlinux.org/pacman/; + license = licenses.gpl2; + platforms = platforms.linux; + maintainers = with maintainers; [ mt-caret ]; + }; +} diff --git a/pkgs/tools/security/browserpass/default.nix b/pkgs/tools/security/browserpass/default.nix index edebd95303a9..af1bb14d02a1 100644 --- a/pkgs/tools/security/browserpass/default.nix +++ b/pkgs/tools/security/browserpass/default.nix @@ -3,7 +3,7 @@ buildGoPackage rec { name = "browserpass-${version}"; - version = "2.0.10"; + version = "2.0.11"; goPackagePath = "github.com/dannyvankooten/browserpass"; @@ -13,7 +13,7 @@ buildGoPackage rec { repo = "browserpass"; owner = "dannyvankooten"; rev = version; - sha256 = "0clkalw2wz2zs0p5hsq57iqp2bdp7y17zf5l2d0y7xfddff9sd82"; + sha256 = "0d6rpkka27a57nv69yiw71jj3m6axdj5hygsz36dznnn8w76vvyv"; }; postInstall = '' diff --git a/pkgs/tools/security/diceware/default.nix b/pkgs/tools/security/diceware/default.nix new file mode 100644 index 000000000000..ce7f1d0e1b4b --- /dev/null +++ b/pkgs/tools/security/diceware/default.nix @@ -0,0 +1,32 @@ +{ lib +, pythonPackages +, fetchpatch +}: + +with pythonPackages; + +buildPythonApplication rec { + pname = "diceware"; + version = "0.9.4"; + + src = fetchPypi { + inherit pname version; + sha256 = "0855n4dh16ws1dhw1ixxwk3wx7qr45xff7pn32pjg58p4z4cx168"; + }; + + nativeBuildInputs = [ pytestrunner ]; + + checkInputs = [ coverage pytest ]; + + # see https://github.com/ulif/diceware/commit/a7d844df76cd4b95a717f21ef5aa6167477b6733 + checkPhase = '' + py.test -m 'not packaging' + ''; + + meta = with lib; { + description = "Generates passphrases by concatenating words randomly picked from wordlists"; + homepage = https://github.com/ulif/diceware; + license = licenses.gpl3; + maintainers = with maintainers; [ asymmetric ]; + }; +} diff --git a/pkgs/tools/security/fprintd/default.nix b/pkgs/tools/security/fprintd/default.nix index 727fc1ccb8ee..effdaaecb18a 100644 --- a/pkgs/tools/security/fprintd/default.nix +++ b/pkgs/tools/security/fprintd/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, intltool -, libfprint, glib, dbus_glib, polkit, nss, pam, systemd }: +, libfprint, glib, dbus-glib, polkit, nss, pam, systemd }: stdenv.mkDerivation rec { name = "fprintd-${version}"; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { sha256 = "05915i0bv7q62fqrs5diqwr8dz3pwqa1c1ivcgggkjyw0xk4ldp5"; }; - buildInputs = [ libfprint glib dbus_glib polkit nss pam systemd ]; + buildInputs = [ libfprint glib dbus-glib polkit nss pam systemd ]; nativeBuildInputs = [ pkgconfig intltool ]; configureFlags = [ "--with-systemdsystemunitdir=$(out)/lib/systemd/system" ]; diff --git a/pkgs/tools/security/gencfsm/default.nix b/pkgs/tools/security/gencfsm/default.nix index 51fff4c59ec1..7f6f28593d20 100644 --- a/pkgs/tools/security/gencfsm/default.nix +++ b/pkgs/tools/security/gencfsm/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, autoconf, automake, intltool, libtool, pkgconfig, encfs -, glib , gnome3, gtk3, libgnome_keyring, vala, wrapGAppsHook, xorg +, glib , gnome3, gtk3, libgnome-keyring, vala, wrapGAppsHook, xorg }: stdenv.mkDerivation rec { @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig ]; buildInputs = [ autoconf automake intltool libtool vala glib encfs - gtk3 libgnome_keyring gnome3.libgee xorg.libSM xorg.libICE + gtk3 libgnome-keyring gnome3.libgee xorg.libSM xorg.libICE wrapGAppsHook ]; patches = [ ./makefile-mkdir.patch ]; diff --git a/pkgs/tools/security/gopass/default.nix b/pkgs/tools/security/gopass/default.nix index abe7aa1fc7cf..db58c6011f07 100644 --- a/pkgs/tools/security/gopass/default.nix +++ b/pkgs/tools/security/gopass/default.nix @@ -1,7 +1,7 @@ { stdenv, buildGoPackage, fetchFromGitHub, git, gnupg, makeWrapper }: buildGoPackage rec { - version = "1.6.7"; + version = "1.6.11"; name = "gopass-${version}"; goPackagePath = "github.com/justwatchcom/gopass"; @@ -12,7 +12,7 @@ buildGoPackage rec { owner = "justwatchcom"; repo = "gopass"; rev = "v${version}"; - sha256 = "0al2avdvmnnz7h21hnvlacr20k50my5l67plgf4cphy52p9461vp"; + sha256 = "12pih414232bsdj1qqc04vck2p9254wjy044n5kbbdqbmfgap7sj"; }; wrapperPath = with stdenv.lib; makeBinPath ([ diff --git a/pkgs/tools/security/keybase/default.nix b/pkgs/tools/security/keybase/default.nix index c221a46d5f96..ee62ef3782ae 100644 --- a/pkgs/tools/security/keybase/default.nix +++ b/pkgs/tools/security/keybase/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { name = "keybase-${version}"; - version = "1.0.40"; + version = "1.0.42"; goPackagePath = "github.com/keybase/client"; subPackages = [ "go/keybase" ]; @@ -13,7 +13,7 @@ buildGoPackage rec { owner = "keybase"; repo = "client"; rev = "v${version}"; - sha256 = "05x0h87dinl8zaqikr1sx38bv1n6ymxqp440b384d8y76w66rphi"; + sha256 = "0vjwyg542hiswcs89csh2vbkfyixlzk3zswjn7x7d1pifrckys0r"; }; buildFlags = [ "-tags production" ]; diff --git a/pkgs/tools/security/kpcli/default.nix b/pkgs/tools/security/kpcli/default.nix index 3776c883ac71..2a81b85482e7 100644 --- a/pkgs/tools/security/kpcli/default.nix +++ b/pkgs/tools/security/kpcli/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, makeWrapper, perl, perlPackages }: stdenv.mkDerivation rec { - version = "3.1"; + version = "3.2"; name = "kpcli-${version}"; src = fetchurl { url = "mirror://sourceforge/kpcli/${name}.pl"; - sha256 = "06m276if13w6gd54wi8nqd1yvk2csbhdmm8pcw9aw3hdlc27gw7i"; + sha256 = "11z6zbnsmqgjw73ai4nrq4idr83flrib22d8fqh1637d36p1nnk1"; }; buildInputs = [ makeWrapper perl ]; diff --git a/pkgs/tools/security/kwalletcli/default.nix b/pkgs/tools/security/kwalletcli/default.nix index c655e9aecf8b..2831ffd31414 100644 --- a/pkgs/tools/security/kwalletcli/default.nix +++ b/pkgs/tools/security/kwalletcli/default.nix @@ -7,14 +7,14 @@ let pname = "kwalletcli"; - version = "3.00"; + version = "3.01"; in mkDerivation rec { name = "${pname}-${version}"; src = fetchurl { url = "https://www.mirbsd.org/MirOS/dist/hosted/kwalletcli/${name}.tar.gz"; - sha256 = "1q87nm7pkmgvkrml6hgbmv0ddx3871w7x86gn90sjc3vw59qfh98"; + sha256 = "03jd7m868dc5dkmm7wbr6dj1h1kp4cb2x8ay8jwvlcbnf7srjzcs"; }; postPatch = '' diff --git a/pkgs/tools/security/lynis/default.nix b/pkgs/tools/security/lynis/default.nix index 5e13674bb77a..cbbb9b4dd3c2 100644 --- a/pkgs/tools/security/lynis/default.nix +++ b/pkgs/tools/security/lynis/default.nix @@ -2,14 +2,14 @@ stdenv.mkDerivation rec { pname = "lynis"; - version = "2.5.7"; + version = "2.6.2"; name = "${pname}-${version}"; src = fetchFromGitHub { owner = "CISOfy"; repo = "${pname}"; rev = "${version}"; - sha256 = "19rfkiri73bi43i4yxpqrxjzpqn5rfrkq2picja5filjv14hbyly"; + sha256 = "0jymp44dmc22cdrsd5hfyv9wc8a5sq92yh9p9c0rg22g53733910"; }; nativeBuildInputs = [ makeWrapper perl ]; diff --git a/pkgs/tools/security/minisign/default.nix b/pkgs/tools/security/minisign/default.nix index 6a8f6d79fe1c..f5bc7a60839e 100644 --- a/pkgs/tools/security/minisign/default.nix +++ b/pkgs/tools/security/minisign/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "minisign-${version}"; - version = "0.7"; + version = "0.8"; src = fetchFromGitHub { repo = "minisign"; owner = "jedisct1"; rev = version; - sha256 = "15w8fgplkxiw9757qahwmgnl4bwx9mm0rnwp1izs2jcy1wy35vp8"; + sha256 = "0rgg9jb5108hd5psivlrfd8cxnjylawm0glcry8ba6zlmkv949r8"; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/tools/security/munge/default.nix b/pkgs/tools/security/munge/default.nix index f04f67c7a434..2e83c691dc7f 100644 --- a/pkgs/tools/security/munge/default.nix +++ b/pkgs/tools/security/munge/default.nix @@ -1,13 +1,13 @@ { stdenv, fetchFromGitHub, autoreconfHook, gawk, gnused, libgcrypt, zlib, bzip2 }: stdenv.mkDerivation rec { - name = "munge-0.5.12"; + name = "munge-0.5.13"; src = fetchFromGitHub { owner = "dun"; repo = "munge"; rev = "${name}"; - sha256 = "1wvkc63bqclpm5xmp3rn199x3jqd99255yicyydgz83cixp7wdbh"; + sha256 = "1c4ff3d8ad3inbliszr4slym3b4cn19bn6mxm13mzy20jyi2rm70"; }; nativeBuildInputs = [ autoreconfHook gawk gnused ]; diff --git a/pkgs/tools/security/oath-toolkit/default.nix b/pkgs/tools/security/oath-toolkit/default.nix index 965ecda164be..9bd3f3726729 100644 --- a/pkgs/tools/security/oath-toolkit/default.nix +++ b/pkgs/tools/security/oath-toolkit/default.nix @@ -1,24 +1,39 @@ -{ stdenv, fetchurl, pam, xmlsec }: +{ stdenv, fetchFromGitLab, pam, xmlsec, autoreconfHook, pkgconfig, libxml2, gtkdoc, perl, gengetopt, bison, help2man }: let securityDependency = if stdenv.isDarwin then xmlsec else pam; -in -stdenv.mkDerivation rec { + +in stdenv.mkDerivation rec { name = "oath-toolkit-2.6.2"; - src = fetchurl { - url = "mirror://savannah/oath-toolkit/${name}.tar.gz"; - sha256 = "182ah8vfbg0yhv6mh1b6ap944d0na6x7lpfkwkmzb6jl9gx4cd5h"; + src = fetchFromGitLab { + owner = "oath-toolkit"; + repo = "oath-toolkit"; + rev = "0dffdec9c5af5c89a5af43add29d8275eefe7414"; + sha256 = "0n2sl444723f1k0sjmc0mzdwslx51yxac39c2cx2bl3ykacgfv74"; }; + buildInputs = [ securityDependency libxml2 perl gengetopt bison ]; - buildInputs = [ securityDependency ]; + nativeBuildInputs = [ autoreconfHook gtkdoc help2man pkgconfig ]; - meta = { - homepage = http://www.nongnu.org/oath-toolkit/; + # man file generation fails when true + enableParallelBuilding = false; + + configureFlags = [ "--disable-pskc" ]; + + # Replicate the steps from cfg.mk + preAutoreconf = '' + printf "gdoc_MANS =\ngdoc_TEXINFOS =\n" > liboath/man/Makefile.gdoc + printf "gdoc_MANS =\ngdoc_TEXINFOS =\n" > libpskc/man/Makefile.gdoc + touch ChangeLog + ''; + + meta = with stdenv.lib; { description = "Components for building one-time password authentication systems"; - platforms = with stdenv.lib.platforms; linux ++ darwin; + homepage = http://www.nongnu.org/oath-toolkit/; + platforms = with platforms; linux ++ darwin; }; } diff --git a/pkgs/tools/security/opencryptoki/default.nix b/pkgs/tools/security/opencryptoki/default.nix index f2929f3e22b4..eff2211a71c5 100644 --- a/pkgs/tools/security/opencryptoki/default.nix +++ b/pkgs/tools/security/opencryptoki/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "opencryptoki-${version}"; - version = "3.8.1"; + version = "3.8.2"; src = fetchFromGitHub { owner = "opencryptoki"; repo = "opencryptoki"; rev = "v${version}"; - sha256 = "1m618pjfzw18irmh6i4pfq1gvcxgyfh9ikjn33nrdj55v2l27g31"; + sha256 = "1rf7cmibmx636vzv7p54g212478a8wim2lfjf2861hfd0m96nv4l"; }; nativeBuildInputs = [ autoreconfHook libtool bison flex ]; diff --git a/pkgs/tools/security/pinentry/default.nix b/pkgs/tools/security/pinentry/default.nix index c551a8161aa2..ac00c1fd5443 100644 --- a/pkgs/tools/security/pinentry/default.nix +++ b/pkgs/tools/security/pinentry/default.nix @@ -24,7 +24,7 @@ stdenv.mkDerivation rec { patches = lib.optionals (gtk2 != null) [ (fetchpatch { url = https://anonscm.debian.org/cgit/pkg-gnupg/pinentry.git/plain/debian/patches/0007-gtk2-When-X11-input-grabbing-fails-try-again-over-0..patch; - sha256 = "046jy7k0n7fj74s5w1h6sq1ljg8y77i0xwi301kv53bhsp0xsirx"; + sha256 = "15r1axby3fdlzz9wg5zx7miv7gqx2jy4immaw4xmmw5skiifnhfd"; }) ]; diff --git a/pkgs/tools/security/qdigidoc/default.nix b/pkgs/tools/security/qdigidoc/default.nix index 87c9fc59a5bd..8d520f90c652 100644 --- a/pkgs/tools/security/qdigidoc/default.nix +++ b/pkgs/tools/security/qdigidoc/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, cmake, ccid, qttools, qttranslations, pkgconfig, pcsclite -, hicolor_icon_theme, libdigidocpp, opensc, shared_mime_info, openldap -, gettext, desktop_file_utils, makeWrapper }: +, hicolor-icon-theme, libdigidocpp, opensc, shared-mime-info, openldap +, gettext, desktop-file-utils, makeWrapper }: stdenv.mkDerivation rec { @@ -27,8 +27,8 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig ]; buildInputs = [ cmake ccid qttools pcsclite qttranslations - hicolor_icon_theme libdigidocpp opensc shared_mime_info - openldap gettext desktop_file_utils makeWrapper + hicolor-icon-theme libdigidocpp opensc shared-mime-info + openldap gettext desktop-file-utils makeWrapper ]; enableParallelBuilding = true; diff --git a/pkgs/tools/security/qesteidutil/default.nix b/pkgs/tools/security/qesteidutil/default.nix index f99a9b6e5565..0c6d15e7d776 100644 --- a/pkgs/tools/security/qesteidutil/default.nix +++ b/pkgs/tools/security/qesteidutil/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchFromGitHub, fetchpatch , cmake, ccid, qttools, qttranslations -, pkgconfig, pcsclite, hicolor_icon_theme +, pkgconfig, pcsclite, hicolor-icon-theme }: stdenv.mkDerivation rec { @@ -21,7 +21,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig ]; buildInputs = [ cmake ccid qttools pcsclite qttranslations - hicolor_icon_theme + hicolor-icon-theme ]; meta = with stdenv.lib; { diff --git a/pkgs/tools/security/shc/default.nix b/pkgs/tools/security/shc/default.nix index 5348ecce6479..9c7b24be69c9 100644 --- a/pkgs/tools/security/shc/default.nix +++ b/pkgs/tools/security/shc/default.nix @@ -2,14 +2,14 @@ stdenv.mkDerivation rec { name = "shc-${version}"; - version = "3.9.3"; + version = "3.9.6"; rev = "${version}"; src = fetchFromGitHub { inherit rev; owner = "neurobin"; repo = "shc"; - sha256 = "00fqzg4a0f4kp4wr8swhi5zqds3gh3gf7cgi1cipn16av0818xsa"; + sha256 = "07l6m24ivjnvbglxkx9mvarpzc453qrlq5ybkyz7jdilh481aj33"; }; meta = with stdenv.lib; { diff --git a/pkgs/tools/security/sops/default.nix b/pkgs/tools/security/sops/default.nix index 79753305c592..26faf2c730c6 100644 --- a/pkgs/tools/security/sops/default.nix +++ b/pkgs/tools/security/sops/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { name = "sops-${version}"; - version = "2.0.8"; + version = "3.0.2"; goPackagePath = "go.mozilla.org/sops"; @@ -10,7 +10,7 @@ buildGoPackage rec { rev = version; owner = "mozilla"; repo = "sops"; - sha256 = "0kawnp24i3r981hz6apfwhgp71002vjq7ir54arq0zkssmykms1c"; + sha256 = "0zszlb35cmw9j9dg1bpcbwxwh094wcfxhas4ns58jp5n79rqwv9i"; }; meta = with stdenv.lib; { diff --git a/pkgs/tools/security/tpm-quote-tools/default.nix b/pkgs/tools/security/tpm-quote-tools/default.nix index 7ffe8e51eacd..1541575aed74 100644 --- a/pkgs/tools/security/tpm-quote-tools/default.nix +++ b/pkgs/tools/security/tpm-quote-tools/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "tpm-quote-tools-${version}"; - version = "1.0.3"; + version = "1.0.4"; src = fetchurl { url = "mirror://sourceforge/project/tpmquotetools/${version}/${name}.tar.gz"; - sha256 = "1d6ry2c78sgv0z4phfrwrbvgag83xnnfri2cdzrd86w4yfgnfwdf"; + sha256 = "1qjs83xb4np4yn1bhbjfhvkiika410v8icwnjix5ad96w2nlxp0h"; }; buildInputs = [ trousers openssl ]; diff --git a/pkgs/tools/security/vault/default.nix b/pkgs/tools/security/vault/default.nix index 002400e2c94b..8118e8306751 100644 --- a/pkgs/tools/security/vault/default.nix +++ b/pkgs/tools/security/vault/default.nix @@ -9,13 +9,13 @@ let }; in stdenv.mkDerivation rec { name = "vault-${version}"; - version = "0.9.0"; + version = "0.9.4"; src = fetchFromGitHub { owner = "hashicorp"; repo = "vault"; rev = "v${version}"; - sha256 = "1c3jaajf3wpjczbncvdpyy5vaa62gb9287bj2zi2khvqzvii36b0"; + sha256 = "1a12pfzln6qdff08j9l1807anrsgn3ggnaqda020p6y9zg1p8xzd"; }; nativeBuildInputs = [ go gox removeReferencesTo ]; diff --git a/pkgs/tools/system/consul-template/default.nix b/pkgs/tools/system/consul-template/default.nix index dee99586c318..e664c0ef8e2c 100644 --- a/pkgs/tools/system/consul-template/default.nix +++ b/pkgs/tools/system/consul-template/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { name = "consul-template-${version}"; - version = "0.18.1"; + version = "0.19.4"; rev = "v${version}"; goPackagePath = "github.com/hashicorp/consul-template"; @@ -11,7 +11,7 @@ buildGoPackage rec { inherit rev; owner = "hashicorp"; repo = "consul-template"; - sha256 = "0swyhc5smjbp5wql43qhpxrcbg47v89l5icb1s60gszhxizlkk7d"; + sha256 = "06agjzpax45gw7s9b69cz9w523nx7ksikqcg0z0vipwrp7pwrydd"; }; meta = with stdenv.lib; { diff --git a/pkgs/tools/system/daemonize/default.nix b/pkgs/tools/system/daemonize/default.nix index f6b9863d1bec..1067e524788b 100644 --- a/pkgs/tools/system/daemonize/default.nix +++ b/pkgs/tools/system/daemonize/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "daemonize-${version}"; - version = "1.7.7"; + version = "1.7.8"; src = fetchurl { url = "https://github.com/bmc/daemonize/archive/release-${version}.tar.gz"; - sha256 = "01gabcc8m4jkymd31p6v5883ii3g7126cici6rd03maf4jizxjmk"; + sha256 = "0q2c3i3si3k7wfhl6fyckkmkc81yp67pz52p3ggis79p4nczri10"; }; meta = with stdenv.lib; { diff --git a/pkgs/tools/system/efibootmgr/default.nix b/pkgs/tools/system/efibootmgr/default.nix index 31be8ab63f41..08cdec72c5b9 100644 --- a/pkgs/tools/system/efibootmgr/default.nix +++ b/pkgs/tools/system/efibootmgr/default.nix @@ -5,26 +5,25 @@ stdenv.mkDerivation rec { version = "15"; nativeBuildInputs = [ pkgconfig ]; - + buildInputs = [ efivar popt ]; src = fetchFromGitHub { - owner = "rhinstaller"; + owner = "rhboot"; repo = "efibootmgr"; rev = version; sha256 = "0z7h1dirp8za6lbbf4f3dzn7l1px891rdymhkbqc10yj6gi1jpqp"; }; - NIX_CFLAGS_COMPILE = "-I${efivar}/include/efivar"; - makeFlags = [ "EFIDIR=nixos" ]; installFlags = [ "prefix=$(out)" ]; meta = with stdenv.lib; { description = "A Linux user-space application to modify the Intel Extensible Firmware Interface (EFI) Boot Manager"; - homepage = https://github.com/rhinstaller/efibootmgr; + homepage = https://github.com/rhboot/efibootmgr; license = licenses.gpl2; + maintainers = with maintainers; [ ]; platforms = platforms.linux; }; } diff --git a/pkgs/tools/system/envconsul/default.nix b/pkgs/tools/system/envconsul/default.nix index fcc3f217d64b..5f013157e32b 100644 --- a/pkgs/tools/system/envconsul/default.nix +++ b/pkgs/tools/system/envconsul/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { name = "envconsul-${version}"; - version = "0.6.2"; + version = "0.7.3"; rev = "v${version}"; goPackagePath = "github.com/hashicorp/envconsul"; @@ -11,7 +11,7 @@ buildGoPackage rec { inherit rev; owner = "hashicorp"; repo = "envconsul"; - sha256 = "176jbicyg7vwd0kgawz859gq7ldrxyw1gx55wig7azakiidkl731"; + sha256 = "03cgxkyyynr067dg5b0lhvaxn60318fj9fh55p1n43vj5nrzgnbc"; }; meta = with stdenv.lib; { diff --git a/pkgs/tools/system/fakeroot/default.nix b/pkgs/tools/system/fakeroot/default.nix index eca3977f459f..8ffa85a5084a 100644 --- a/pkgs/tools/system/fakeroot/default.nix +++ b/pkgs/tools/system/fakeroot/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, fetchpatch, getopt, libcap }: stdenv.mkDerivation rec { - version = "1.20.2"; + version = "1.22"; name = "fakeroot-${version}"; src = fetchurl { url = "http://http.debian.net/debian/pool/main/f/fakeroot/fakeroot_${version}.orig.tar.bz2"; - sha256 = "0313xb2j6a4wihrw9gfd4rnyqw7zzv6wf3rfh2gglgnv356ic2kw"; + sha256 = "1zn67sp066q63vx95r671v0ki878i40a2wa57pmh64k43r56m05x"; }; patches = stdenv.lib.optional stdenv.isLinux ./einval.patch diff --git a/pkgs/tools/system/fcron/default.nix b/pkgs/tools/system/fcron/default.nix index 5de03199fa51..2bcab1c36b27 100644 --- a/pkgs/tools/system/fcron/default.nix +++ b/pkgs/tools/system/fcron/default.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { name = "fcron-${version}"; - version = "3.2.1"; + version = "3.3.0"; src = fetchurl { url = "http://fcron.free.fr/archives/${name}.src.tar.gz"; - sha256 = "0sjz7r050myj6zgixzx3pk5ff819v6b0zfn0q1lkd19jkaix0531"; + sha256 = "0q5b1fdq1rpsd4lj7v717x47pmn62hhm13394g0yxqi614xd7sls"; }; buildInputs = [ perl ]; diff --git a/pkgs/tools/system/fio/default.nix b/pkgs/tools/system/fio/default.nix index 1c98f7126937..9e2bd1a2e2c4 100644 --- a/pkgs/tools/system/fio/default.nix +++ b/pkgs/tools/system/fio/default.nix @@ -1,8 +1,8 @@ { stdenv, fetchFromGitHub, libaio, python, zlib }: let - version = "3.4"; - sha256 = "0img4288ygil36bsgpr4yh06zfbp3mdkf7zbyqjcrjgpr4mai9zf"; + version = "3.5"; + sha256 = "1h6qwvn0h3xz98420a19v8isfjkfnac9vvx8hsw8q4ycb35r8n3h"; in stdenv.mkDerivation rec { diff --git a/pkgs/tools/system/gptfdisk/cross-makefile.patch b/pkgs/tools/system/gptfdisk/cross-makefile.patch new file mode 100644 index 000000000000..0b87de0a17a0 --- /dev/null +++ b/pkgs/tools/system/gptfdisk/cross-makefile.patch @@ -0,0 +1,20 @@ +commit a5381e8aaa67647a4ba0fb41b951125ae309b078 +Author: Shea Levy +Date: Sat Feb 24 08:35:54 2018 -0500 + + Makefile: Don't hard-code CC and CXX. + + These variables should be provided by the Make implementation and the + build environment. In particular, this fixes cross-compilation of + gptfdisk. + +diff --git a/Makefile b/Makefile +index a3576b3..d76fab4 100644 +--- a/Makefile ++++ b/Makefile +@@ -1,5 +1,3 @@ +-CC=gcc +-CXX=g++ + CFLAGS+=-D_FILE_OFFSET_BITS=64 + #CXXFLAGS+=-Wall -D_FILE_OFFSET_BITS=64 -D USE_UTF16 + CXXFLAGS+=-Wall -D_FILE_OFFSET_BITS=64 diff --git a/pkgs/tools/system/gptfdisk/default.nix b/pkgs/tools/system/gptfdisk/default.nix index f9fba2dde91d..4d7bcc365660 100644 --- a/pkgs/tools/system/gptfdisk/default.nix +++ b/pkgs/tools/system/gptfdisk/default.nix @@ -10,8 +10,10 @@ stdenv.mkDerivation rec { url = "mirror://sourceforge/gptfdisk/${name}.tar.gz"; sha256 = "0p0vr67lnqdsgdv2y144xmjqa1a2nijrrd3clc8dc2f46pn5mzc9"; }; + # https://sourceforge.net/p/gptfdisk/code/merge-requests/9/ + patches = [ ./cross-makefile.patch ]; - patchPhase = stdenv.lib.optionalString stdenv.isDarwin '' + postPatch = stdenv.lib.optionalString stdenv.isDarwin '' substituteInPlace Makefile.mac --replace \ "-mmacosx-version-min=10.4" "-mmacosx-version-min=10.6" substituteInPlace Makefile.mac --replace \ diff --git a/pkgs/tools/system/hwinfo/default.nix b/pkgs/tools/system/hwinfo/default.nix index 08b6b480ef82..67258399d8bc 100644 --- a/pkgs/tools/system/hwinfo/default.nix +++ b/pkgs/tools/system/hwinfo/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "hwinfo-${version}"; - version = "21.50"; + version = "21.52"; src = fetchFromGitHub { owner = "opensuse"; repo = "hwinfo"; rev = "${version}"; - sha256 = "1kkq979qqdalxdm6f0gyl3l9nk5rm6i6rbms43rmy52jfda5f5bv"; + sha256 = "1kva5bhylxbxgp2lv48av8mzcyybigj45rbwl9736l1kiv58i21r"; }; patchPhase = '' diff --git a/pkgs/tools/system/ipmiutil/default.nix b/pkgs/tools/system/ipmiutil/default.nix index ae8a1b449374..fdefb508fe51 100644 --- a/pkgs/tools/system/ipmiutil/default.nix +++ b/pkgs/tools/system/ipmiutil/default.nix @@ -2,12 +2,12 @@ stdenv.mkDerivation rec { baseName = "ipmiutil"; - version = "3.0.7"; + version = "3.0.8"; name = "${baseName}-${version}"; src = fetchurl { url = "mirror://sourceforge/project/${baseName}/${name}.tar.gz"; - sha256 = "0bsl4czbwmz1f42b15y0fabys50bbfll4z73nm9xk161i2njzz6y"; + sha256 = "0pqi63v9l95px1k0dh68gmbd4pbbpwy0pcg6nr5bi0zy898if135"; }; buildInputs = [ openssl ]; diff --git a/pkgs/tools/system/logrotate/default.nix b/pkgs/tools/system/logrotate/default.nix index 1c8b386fc8c6..fa5df06dae37 100644 --- a/pkgs/tools/system/logrotate/default.nix +++ b/pkgs/tools/system/logrotate/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "logrotate-${version}"; - version = "3.12.3"; + version = "3.13.0"; src = fetchFromGitHub { owner = "logrotate"; repo = "logrotate"; rev = version; - sha256 = "04ygb709fj4ai8m2f1c6imzcmkdvr3ib5zf5qw2lif4fsb30jvyi"; + sha256 = "0b7dnch74pddml3ysavizq26jgwdv0rjmwc8lf6zfvn9fjz19vvs"; }; # Logrotate wants to access the 'mail' program; to be done. diff --git a/pkgs/tools/system/monit/default.nix b/pkgs/tools/system/monit/default.nix index 71a4db63c84f..9057e5bc9c50 100644 --- a/pkgs/tools/system/monit/default.nix +++ b/pkgs/tools/system/monit/default.nix @@ -1,11 +1,11 @@ {stdenv, fetchurl, openssl, bison, flex, pam, zlib, usePAM ? stdenv.isLinux }: stdenv.mkDerivation rec { - name = "monit-5.23.0"; + name = "monit-5.25.1"; src = fetchurl { url = "${meta.homepage}dist/${name}.tar.gz"; - sha256 = "04v7sp2vc1q6h8c5j8h4izffn9d97cdj0k64m4ml00lw6wxgwffx"; + sha256 = "1g417cf6j0v6z233a3625fw1cxsh45xql7ag83jz2988n772ap2b"; }; nativeBuildInputs = [ bison flex ]; diff --git a/pkgs/tools/system/sleuthkit/default.nix b/pkgs/tools/system/sleuthkit/default.nix index c4347da44607..616498593972 100644 --- a/pkgs/tools/system/sleuthkit/default.nix +++ b/pkgs/tools/system/sleuthkit/default.nix @@ -1,14 +1,14 @@ { stdenv, fetchFromGitHub, autoreconfHook, libewf, afflib, openssl, zlib }: stdenv.mkDerivation rec { - version = "4.5.0"; + version = "4.6.0"; name = "sleuthkit-${version}"; src = fetchFromGitHub { owner = "sleuthkit"; repo = "sleuthkit"; rev = name; - sha256 = "0h9l9yl5ibbgriq12gizg8k0r6jw6bnii3iljjp4p963wc0ms9b9"; + sha256 = "0m5ll5sx0pxkn58y582b3v90rsfdrh8dm02kmv61psd0k6q0p91x"; }; postPatch = '' diff --git a/pkgs/tools/system/syslog-ng-incubator/default.nix b/pkgs/tools/system/syslog-ng-incubator/default.nix index ef92bdfe47e0..c90c67c77372 100644 --- a/pkgs/tools/system/syslog-ng-incubator/default.nix +++ b/pkgs/tools/system/syslog-ng-incubator/default.nix @@ -4,13 +4,13 @@ stdenv.mkDerivation rec { name = "syslog-ng-incubator-${version}"; - version = "0.6.0"; + version = "0.6.2"; src = fetchFromGitHub { owner = "balabit"; repo = "syslog-ng-incubator"; rev = name; - sha256 = "1wiv289lc5kxsd3ydyn1zvvgjrj1mv2jghv0cm425wsdsfr7fjb0"; + sha256 = "17y85cqcyfbp882gaii731cvz5bg1s8rgda271jh6kgnrz5rbd4s"; }; nativeBuildInputs = [ pkgconfig autoreconfHook yacc ]; diff --git a/pkgs/tools/system/syslog-ng/default.nix b/pkgs/tools/system/syslog-ng/default.nix index 397ba053841d..a629e493c929 100644 --- a/pkgs/tools/system/syslog-ng/default.nix +++ b/pkgs/tools/system/syslog-ng/default.nix @@ -9,11 +9,11 @@ in stdenv.mkDerivation rec { name = "${pname}-${version}"; - version = "3.11.1"; + version = "3.13.2"; src = fetchurl { url = "https://github.com/balabit/${pname}/releases/download/${name}/${name}.tar.gz"; - sha256 = "1sa51bh3rs4gq4zpgkyv94lqcx3qvxa41d2dsa7hyxidkp1rs2b4"; + sha256 = "1s6kg91sb8h2w4n60v22zis6pl2rggarpjjp00c81039jggk2gcs"; }; nativeBuildInputs = [ pkgconfig which ]; diff --git a/pkgs/tools/system/thermald/default.nix b/pkgs/tools/system/thermald/default.nix index 67dd3588b007..1300a6a87655 100644 --- a/pkgs/tools/system/thermald/default.nix +++ b/pkgs/tools/system/thermald/default.nix @@ -1,18 +1,18 @@ -{ stdenv, fetchFromGitHub, autoconf, automake, libtool, pkgconfig, dbus_libs, dbus_glib, libxml2 }: +{ stdenv, fetchFromGitHub, autoconf, automake, libtool, pkgconfig, dbus_libs, dbus-glib, libxml2 }: stdenv.mkDerivation rec { name = "thermald-${version}"; - version = "1.6"; + version = "1.7.1"; src = fetchFromGitHub { owner = "01org"; repo = "thermal_daemon"; rev = "v${version}"; - sha256 = "1qzvmzkzdrmwrzfbxb2rz1i39j5zskjxiiv1w9m0xyg08p2wr7h3"; + sha256 = "0y0r8zcaxcnim3axc7kh5pm4py33pgv5mwh002cbrw6h90l2qzq1"; }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ autoconf automake libtool dbus_libs dbus_glib libxml2 ]; + buildInputs = [ autoconf automake libtool dbus_libs dbus-glib libxml2 ]; patchPhase = ''sed -e 's/upstartconfdir = \/etc\/init/upstartconfdir = $(out)\/etc\/init/' -i data/Makefile.am''; diff --git a/pkgs/tools/system/ts/default.nix b/pkgs/tools/system/ts/default.nix index 0e51b0610910..79ba7d893040 100644 --- a/pkgs/tools/system/ts/default.nix +++ b/pkgs/tools/system/ts/default.nix @@ -4,7 +4,7 @@ stdenv.mkDerivation rec { - name = "ts-0.7.6"; + name = "ts-1.0"; installPhase=''make install "PREFIX=$out"''; @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "http://viric.name/~viric/soft/ts/${name}.tar.gz"; - sha256 = "07b61sx3hqpdxlg5a1xrz9sxww9yqdix3bmr0sm917r3rzk87lwk"; + sha256 = "15dkzczx10fhl0zs9bmcgkxfbwq2znc7bpscljm4rchbzx7y6lsg"; }; meta = with stdenv.lib; { diff --git a/pkgs/tools/text/mairix/default.nix b/pkgs/tools/text/mairix/default.nix index d8db034f151e..e72824db6273 100644 --- a/pkgs/tools/text/mairix/default.nix +++ b/pkgs/tools/text/mairix/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, zlib, bzip2, bison, flex }: stdenv.mkDerivation rec { - name = "mairix-0.23"; + name = "mairix-0.24"; src = fetchurl { url = "mirror://sourceforge/mairix/${name}.tar.gz"; - sha256 = "1yzjpmsih6c60ks0d0ia153z9g35nj7dmk98383m0crw31dj6kl0"; + sha256 = "0msaxz5c5hf7k1ci16i67m4ynrbrpsxbqzk84nz6z2vnkh3jww50"; }; buildInputs = [ zlib bzip2 bison flex ]; diff --git a/pkgs/tools/text/mdbook/default.nix b/pkgs/tools/text/mdbook/default.nix new file mode 100644 index 000000000000..5bbe8cfd0943 --- /dev/null +++ b/pkgs/tools/text/mdbook/default.nix @@ -0,0 +1,30 @@ +{ stdenv, fetchFromGitHub, rustPlatform, CoreServices }: + +rustPlatform.buildRustPackage rec { + name = "mdbook-${version}"; + version = "0.1.3"; + + src = fetchFromGitHub { + owner = "rust-lang-nursery"; + repo = "mdBook"; + rev = "v${version}"; + sha256 = "0m0vprjpd02z4nr3vd4qha2jka7l36k4liw8jcbf4xs09c584sjv"; + }; + + cargoSha256 = "19hpr78p9rzgirq6fjw8v11d5mgcglms6vbqgjyvg49xmkklsqzr"; + depsSha256 = "0q68qyl2h6i0qsz82z840myxlnjay8p1w5z7hfyr8fqp7wgwa9cx"; + + buildInputs = stdenv.lib.optionals stdenv.isDarwin [ CoreServices ]; + + meta = with stdenv.lib; { + description = "Create books from MarkDown"; + homepage = https://github.com/rust-lang-nursery/mdbook; + license = [ licenses.asl20 licenses.mit ]; + maintainers = [ maintainers.havvy ]; + platforms = platforms.all; + + # Because CoreServices needs to be updated, + # but Apple won't release the source. + broken = stdenv.isDarwin; + }; +} diff --git a/pkgs/tools/text/peco/default.nix b/pkgs/tools/text/peco/default.nix index 9f181094ea00..7b87fd1e492c 100644 --- a/pkgs/tools/text/peco/default.nix +++ b/pkgs/tools/text/peco/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { name = "peco-${version}"; - version = "0.5.1"; + version = "0.5.2"; goPackagePath = "github.com/peco/peco"; subPackages = [ "cmd/peco" ]; @@ -11,7 +11,7 @@ buildGoPackage rec { owner = "peco"; repo = "peco"; rev = "v${version}"; - sha256 = "0jnlpr3nxx8xmjb6w4jlwshzz0p9hlww9919qbkm66afv16k0vm8"; + sha256 = "0cgfwbnz4jp2nvmqf2i03xf69by8g0xgd3k5k9aj46y9hps1ka92"; }; goDeps = ./deps.nix; diff --git a/pkgs/tools/text/ripgrep/default.nix b/pkgs/tools/text/ripgrep/default.nix index a93ec8e4e4c9..11355bb6df1d 100644 --- a/pkgs/tools/text/ripgrep/default.nix +++ b/pkgs/tools/text/ripgrep/default.nix @@ -2,16 +2,16 @@ rustPlatform.buildRustPackage rec { name = "ripgrep-${version}"; - version = "0.8.0"; + version = "0.8.1"; src = fetchFromGitHub { owner = "BurntSushi"; repo = "ripgrep"; rev = "${version}"; - sha256 = "0ha46vhma2diqxfgasdc9gwlkcrlhc4l65nayvdy4m2ah5bm4qp6"; + sha256 = "1h7k9ik723qzplwl0a5i0anzdr115wwklfgp0n11p4k2ckh7nygn"; }; - cargoSha256 = "0q44qa9myrzg42q0lvclpk5nypmf0q7v3xy5nnsb28j3imvcrs4p"; + cargoSha256 = "1gld93dxfm4vyiz1b43smbdhxmyzdk2236ksp8vw1zb1yyzn83nf"; nativeBuildInputs = [ asciidoc docbook_xsl libxslt ]; diff --git a/pkgs/tools/text/sift/default.nix b/pkgs/tools/text/sift/default.nix index fd4cef27ba17..efa5e539bd14 100644 --- a/pkgs/tools/text/sift/default.nix +++ b/pkgs/tools/text/sift/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { name = "sift-${version}"; - version = "0.8.0"; + version = "0.9.0"; rev = "v${version}"; goPackagePath = "github.com/svent/sift"; @@ -11,7 +11,7 @@ buildGoPackage rec { inherit rev; owner = "svent"; repo = "sift"; - sha256 = "1nb042k420xr6000ipwhqn41vg8jfp6ghq4z7y1sjnndkrhclzm1"; + sha256 = "0bgy0jf84z1c3msvb60ffj4axayfchdkf0xjnsbx9kad1v10g7i1"; }; goDeps = ./deps.nix; diff --git a/pkgs/tools/text/xidel/default.nix b/pkgs/tools/text/xidel/default.nix index 91cecce61225..e1a0a5abf965 100644 --- a/pkgs/tools/text/xidel/default.nix +++ b/pkgs/tools/text/xidel/default.nix @@ -2,7 +2,7 @@ stdenv.mkDerivation rec { name = "xidel-${version}"; - version = "0.8.4"; + version = "0.9.6"; ## Source archive lacks file (manageUtils.sh), using pre-built package for now. #src = fetchurl { @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { if stdenv.system == "x86_64-linux" then fetchurl { url = "mirror://sourceforge/videlibri/Xidel/Xidel%20${version}/xidel_${version}-1_amd64.deb"; - sha256 = "0gq95ag2661hsw8b7ii6z07ian832cz8g21lvq2cvps4a80ql1gi"; + sha256 = "0hskc74y7p4j1x33yx0w4fvr610p2yimas8pxhr6bs7mb9b300h7"; } else if stdenv.system == "i686-linux" then fetchurl { diff --git a/pkgs/tools/text/xml/html-xml-utils/default.nix b/pkgs/tools/text/xml/html-xml-utils/default.nix index e2445e39e3cb..987d192bafcd 100644 --- a/pkgs/tools/text/xml/html-xml-utils/default.nix +++ b/pkgs/tools/text/xml/html-xml-utils/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "html-xml-utils-${version}"; - version = "7.1"; + version = "7.6"; src = fetchurl { url = "http://www.w3.org/Tools/HTML-XML-utils/${name}.tar.gz"; - sha256 = "0vnmcrbnc7irrszx5h71s3mqlp9wqh19zig519zbnr5qccigs3pc"; + sha256 = "0l97ps089byy62838wf2jwvvc465iw29z9r5kwmwcq7f3bn11y3m"; }; buildInputs = [curl libiconv]; diff --git a/pkgs/tools/typesetting/tectonic/default.nix b/pkgs/tools/typesetting/tectonic/default.nix index 3fdebd19f3cb..ad612fa18af6 100644 --- a/pkgs/tools/typesetting/tectonic/default.nix +++ b/pkgs/tools/typesetting/tectonic/default.nix @@ -1,20 +1,18 @@ { stdenv, fetchFromGitHub, rustPlatform, makeWrapper , fontconfig, harfbuzz-icu, openssl, pkgconfig }: -with rustPlatform; - -buildRustPackage rec { +rustPlatform.buildRustPackage rec { name = "tectonic-${version}"; - version = "0.1.6"; + version = "0.1.7"; src = fetchFromGitHub { owner = "tectonic-typesetting"; repo = "tectonic"; rev = "v${version}"; - sha256 = "0k5vkn112bjwh4wnxryzqz79dlja64k7s105mf3yaik136hqnmqv"; + sha256 = "007l0l9xnyayiqiap22zlsp8l9afdw803064cj8inr3q7ckzfcpb"; }; - cargoSha256 = "03bqhgz8c4ipdkd3g448bcrr6d188h87vskcfcc3mqlcxg77b8q5"; + cargoSha256 = "0kjy9zrjlrlkr2il62nz35hm1nndyym9dbnas43hzz7y8hdf859k"; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/tools/typesetting/tex/auctex/default.nix b/pkgs/tools/typesetting/tex/auctex/default.nix index a0c6a66634b0..1ab009458405 100644 --- a/pkgs/tools/typesetting/tex/auctex/default.nix +++ b/pkgs/tools/typesetting/tex/auctex/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, emacs, texlive, ghostscript }: let auctex = stdenv.mkDerivation ( rec { - version = "11.90"; + version = "12.1"; name = "${pname}-${version}"; # Make this a valid tex(live-new) package; @@ -14,7 +14,7 @@ let auctex = stdenv.mkDerivation ( rec { src = fetchurl { url = "mirror://gnu/${pname}/${name}.tar.gz"; - sha256 = "13zimbyar3159arrcklmnmjxjvibrjpkac6d53mfv03pwpc2y8rw"; + sha256 = "1d2x59jw42hr81fma195bniqyhvp5ig5q0xmywbkcy59f16wlp69"; }; buildInputs = [ emacs texlive.combined.scheme-basic ghostscript ]; diff --git a/pkgs/tools/typesetting/tex/texlive/bin.nix b/pkgs/tools/typesetting/tex/texlive/bin.nix index 44c2dc163178..f022ccb829ab 100644 --- a/pkgs/tools/typesetting/tex/texlive/bin.nix +++ b/pkgs/tools/typesetting/tex/texlive/bin.nix @@ -168,6 +168,8 @@ core-big = stdenv.mkDerivation { #TODO: upmendex # http://tex.stackexchange.com/questions/97999/when-to-use-luajittex-in-favour-of-luatex ]; + patches = [ ./luatex-gcc7.patch ]; + configureScript = ":"; # we use static libtexlua, because it's only used by a single binary diff --git a/pkgs/tools/typesetting/tex/texlive/luatex-gcc7.patch b/pkgs/tools/typesetting/tex/texlive/luatex-gcc7.patch new file mode 100644 index 000000000000..cdaa968bd421 --- /dev/null +++ b/pkgs/tools/typesetting/tex/texlive/luatex-gcc7.patch @@ -0,0 +1,30 @@ +https://www.tug.org/pipermail/tex-live/2017-June/040192.html +--- + texk/web2c/luatexdir/luaffi/ctype.c | 4 ++++ + texk/web2c/luatexdir/luaffi/ffi.h | 2 +- + 2 files changed, 5 insertions(+), 1 deletion(-) + +--- a/texk/web2c/luatexdir/luaffi/ctype.c ++++ b/texk/web2c/luatexdir/luaffi/ctype.c 2017-05-31 13:08:25.421741873 +0000 +@@ -245,6 +245,10 @@ void* to_cdata(lua_State* L, int idx, st + + lua_pop(L, 1); /* mt */ + cd = (struct cdata*) lua_touserdata(L, idx); ++ if (!cd) { ++ lua_pushnil(L); ++ return NULL; ++ } + *ct = cd->type; + lua_getuservalue(L, idx); + +--- a/texk/web2c/luatexdir/luaffi/ffi.h ++++ b/texk/web2c/luatexdir/luaffi/ffi.h 2017-06-01 09:12:45.128442092 +0000 +@@ -370,7 +370,7 @@ __declspec(align(16)) + #endif + struct cdata { + const struct ctype type +-#ifdef __GNUC__ ++#if 0 /* def __GNUC__ */ + __attribute__ ((aligned(16))) + #endif + ; diff --git a/pkgs/tools/virtualization/awsebcli/default.nix b/pkgs/tools/virtualization/awsebcli/default.nix index 5e5f76975bae..3b3bda0f22dc 100644 --- a/pkgs/tools/virtualization/awsebcli/default.nix +++ b/pkgs/tools/virtualization/awsebcli/default.nix @@ -2,12 +2,10 @@ let localPython = python.override { - packageOverrides = self: super: rec { + packageOverrides = self: super: { cement = super.cement.overridePythonAttrs (oldAttrs: rec { version = "2.8.2"; - - src = super.fetchPypi { - inherit (oldAttrs) pname; + src = oldAttrs.src.override { inherit version; sha256 = "1li2whjzfhbpg6fjb6r1r92fb3967p1xv6hqs3j787865h2ysrc7"; }; @@ -15,30 +13,15 @@ let colorama = super.colorama.overridePythonAttrs (oldAttrs: rec { version = "0.3.7"; - - src = super.fetchPypi { - inherit (oldAttrs) pname; + src = oldAttrs.src.override { inherit version; sha256 = "0avqkn6362v7k2kg3afb35g4sfdvixjgy890clip4q174p9whhz0"; }; }); - docker = super.docker.overridePythonAttrs (oldAttrs: rec { - pname = "docker-py"; - version = "1.7.2"; - name = "${pname}-${version}"; - - src = super.fetchPypi { - inherit pname version; - sha256 = "0k6hm3vmqh1d3wr9rryyif5n4rzvcffdlb1k4jvzp7g4996d3ccm"; - }; - }); - requests = super.requests.overridePythonAttrs (oldAttrs: rec { version = "2.9.1"; - - src = super.fetchPypi { - inherit (oldAttrs) pname; + src = oldAttrs.src.override { inherit version; sha256 = "0zsqrzlybf25xscgi7ja4s48y2abf9wvjkn47wh984qgs1fq2xy5"; }; @@ -46,18 +29,15 @@ let semantic-version = super.semantic-version.overridePythonAttrs (oldAttrs: rec { version = "2.5.0"; - - src = super.fetchPypi { - inherit (oldAttrs) pname; inherit version; + src = oldAttrs.src.override { + inherit version; sha256 = "0p5n3d6blgkncxdz00yxqav0cis87fisdkirjm0ljjh7rdfx7aiv"; }; }); tabulate = super.tabulate.overridePythonAttrs (oldAttrs: rec { version = "0.7.5"; - - src = super.fetchPypi { - inherit (oldAttrs) pname; + src = oldAttrs.src.override { inherit version; sha256 = "03l1r7ddd1a0j2snv1yd0hlnghjad3fg1an1jr8936ksv75slwch"; }; @@ -65,13 +45,12 @@ let }; }; in with localPython.pkgs; buildPythonApplication rec { - name = "${pname}-${version}"; pname = "awsebcli"; - version = "3.12.2"; + version = "3.12.3"; src = fetchPypi { inherit pname version; - sha256 = "19sgx43fyq35rqp0q8zbqavgg0k0n46iy1fqsxvw9lf0g0v62pjh"; + sha256 = "0jj6xhvsrgvc5pm05zbd95zvx36ssywq70j6q1kzcdv1flfzzyp9"; }; checkInputs = [ @@ -81,7 +60,10 @@ in with localPython.pkgs; buildPythonApplication rec { doCheck = false; propagatedBuildInputs = [ - blessed botocore cement colorama docker dockerpty docopt pathspec pyyaml + # FIXME: Add optional docker dependency, which requires requests >= 2.14.2. + # Otherwise, awsebcli will try to install it using pip when using some + # commands (like "eb local run"). + blessed botocore cement colorama dockerpty docopt pathspec pyyaml requests semantic-version setuptools tabulate termcolor websocket_client ]; @@ -92,7 +74,7 @@ in with localPython.pkgs; buildPythonApplication rec { meta = with stdenv.lib; { homepage = https://aws.amazon.com/elasticbeanstalk/; - description = "A command line interface for Elastic Beanstalk."; + description = "A command line interface for Elastic Beanstalk"; maintainers = with maintainers; [ eqyiel ]; license = licenses.asl20; }; diff --git a/pkgs/top-level/aliases.nix b/pkgs/top-level/aliases.nix index 8da6bcef4957..06da21813ae3 100644 --- a/pkgs/top-level/aliases.nix +++ b/pkgs/top-level/aliases.nix @@ -34,6 +34,8 @@ mapAliases (rec { ammonite-repl = ammonite; # added 2017-05-02 arduino_core = arduino-core; # added 2015-02-04 asciidocFull = asciidoc-full; # added 2014-06-22 + at_spi2_atk = at-spi2-atk; # added 2018-02-25 + at_spi2_core = at-spi2-core; # added 2018-02-25 bar = lemonbar; # added 2015-01-16 bar-xft = lemonbar-xft; # added 2015-01-16 bashCompletion = bash-completion; # Added 2016-09-28 @@ -44,47 +46,63 @@ mapAliases (rec { cifs_utils = cifs-utils; # added 2016-08 clangAnalyzer = clang-analyzer; # added 2015-02-20 clawsMail = claws-mail; # added 2016-04-29 + clutter_gtk = clutter-gtk; # added 2018-02-25 conkerorWrapper = conkeror; # added 2015-01 cool-old-term = cool-retro-term; # added 2015-01-31 cupsBjnp = cups-bjnp; # added 2016-01-02 cups_filters = cups-filters; # added 2016-08 cv = progress; # added 2015-09-06 + dbus_glib = dbus-glib; # added 2018-02-25 + deadbeef-mpris2-plugin = deadbeefPlugins.mpris2; # added 2018-02-23 debian_devscripts = debian-devscripts; # added 2016-03-23 + desktop_file_utils = desktop-file-utils; # added 2018-02-25 digikam5 = digikam; # added 2017-02-18 double_conversion = double-conversion; # 2017-11-22 dwarf_fortress = dwarf-fortress; # added 2016-01-23 dwbWrapper = dwb; # added 2015-01 enblendenfuse = enblend-enfuse; # 2015-09-30 + evolution_data_server = evolution-data-server; # added 2018-02-25 exfat-utils = exfat; # 2015-09-11 firefox-esr-wrapper = firefox-esr; # 2016-01 firefox-wrapper = firefox; # 2016-01 firefoxWrapper = firefox; # 2015-09 + font-awesome-ttf = font-awesome_4; # 2018-02-25 foomatic_filters = foomatic-filters; # 2016-08 fuse_exfat = exfat; # 2015-09-11 gettextWithExpat = gettext; # 2016-02-19 gdb-multitarget = gdb; # added 2017-11-13 git-hub = gitAndTools.git-hub; # added 2016-04-29 + glib_networking = glib-networking; # added 2018-02-25 go-pup = pup; # added 2017-12-19 googleAuthenticator = google-authenticator; # added 2016-10-16 + gnome_doc_utils = gnome-doc-utils; # added 2018-02-25 + gnome_themes_standard = gnome-themes-standard; # added 2018-02-25 grantlee5 = libsForQt5.grantlee; # added 2015-12-19 + gsettings_desktop_schemas = gsettings-desktop-schemas; # added 2018-02-25 gst_ffmpeg = gst-ffmpeg; # added 2017-02 gst_plugins_base = gst-plugins-base; # added 2017-02 gst_plugins_good = gst-plugins-good; # added 2017-02 gst_plugins_bad = gst-plugins-bad; # added 2017-02 gst_plugins_ugly = gst-plugins-ugly; # added 2017-02 gst_python = gst-python; # added 2017-02 + gtk_doc = gtk-doc; # added 2018-02-25 guileCairo = guile-cairo; # added 2017-09-24 guileGnome = guile-gnome; # added 2017-09-24 guile_lib = guile-lib; # added 2017-09-24 guileLint = guile-lint; # added 2017-09-27 guile_ncurses = guile-ncurses; # added 2017-09-24 + gupnp_av = gupnp-av; # added 2018-02-25 + gupnp_dlna = gupnp-dlna; # added 2018-02-25 + gupnp_igd = gupnp-igd; # added 2018-02-25 gupnptools = gupnp-tools; # added 2015-12-19 gnustep-make = gnustep.make; # added 2016-7-6 + hicolor_icon_theme = hicolor-icon-theme; # added 2018-02-25 htmlTidy = html-tidy; # added 2014-12-06 iana_etc = iana-etc; # added 2017-03-08 idea = jetbrains; # added 2017-04-03 inotifyTools = inotify-tools; joseki = apache-jena-fuseki; # added 2016-02-28 + json_glib = json-glib; # added 2018-02-25 jquery_ui = jquery-ui; # added 2014-09-07 kdiff3-qt5 = kdiff3; # added 2017-02-18 keepassx2-http = keepassx-reboot; # added 2016-10-17 @@ -94,9 +112,13 @@ mapAliases (rec { krename-qt5 = krename; # added 2017-02-18 letsencrypt = certbot; # added 2016-05-16 libdbusmenu_qt5 = libsForQt5.libdbusmenu; # added 2015-12-19 + libcanberra_gtk2 = libcanberra-gtk2; # added 2018-02-25 + libcanberra_gtk3 = libcanberra-gtk3; # added 2018-02-25 libcap_manpages = libcap.doc; # added 2016-04-29 libcap_pam = if stdenv.isLinux then libcap.pam else null; # added 2016-04-29 libcap_progs = libcap.out; # added 2016-04-29 + libgnome_keyring = libgnome-keyring; # added 2018-02-25 + libgnome_keyring3 = libgnome-keyring3; # added 2018-02-25 libgumbo = gumbo; # added 2018-01-21 libjson_rpc_cpp = libjson-rpc-cpp; # added 2017-02-28 libmysql = mysql.connector-c; # added # 2017-12-28, this was a misnomer refering to libmysqlclient @@ -110,20 +132,30 @@ mapAliases (rec { m3d-linux = m33-linux; # added 2016-08-13 manpages = man-pages; # added 2015-12-06 man_db = man-db; # added 2016-05 + piwik = matomo; # added 2018-01-16 midoriWrapper = midori; # added 2015-01 minc_tools = minc-tools; # 2017-12 mlt-qt5 = libsForQt5.mlt; # added 2015-12-19 + mobile_broadband_provider_info = mobile-broadband-provider-info; # added 2018-02-25 module_init_tools = kmod; # added 2016-04-22 mssys = ms-sys; # added 2015-12-13 multipath_tools = multipath-tools; # added 2016-01-21 mupen64plus1_5 = mupen64plus; # added 2016-02-12 mysqlWorkbench = mysql-workbench; # added 2017-01-19 ncat = nmap; # added 2016-01-26 + networkmanager_fortisslvpn = networkmanager-fortisslvpn; # added 2018-02-25 + networkmanager_iodine = networkmanager-iodine; # added 2018-02-25 + networkmanager_l2tp = networkmanager-l2tp; # added 2018-02-25 + networkmanager_openconnect = networkmanager-openconnect; # added 2018-02-25 + networkmanager_openvpn = networkmanager-openvpn; # added 2018-02-25 + networkmanager_pptp = networkmanager-pptp; # added 2018-02-25 + networkmanager_vpnc = networkmanager-vpnc; # added 2018-02-25 nmap_graphical = nmap-graphical; # added 2017-01-19 nfsUtils = nfs-utils; # added 2014-12-06 opencl-icd = ocl-icd; # added 2017-01-20 openssh_with_kerberos = openssh; # added 2018-01-28 owncloudclient = owncloud-client; # added 2016-08 + p11_kit = p11-kit; # added 2018-02-25 pgp-tools = signing-party; # added 2017-03-26 pidgin-with-plugins = pidgin; # added 2016-06 pidginlatexSF = pidgin-latex; # added 2014-11-02 @@ -160,16 +192,28 @@ mapAliases (rec { saneBackendsGit = sane-backends-git; # added 2016-01-02 saneFrontends = sane-frontends; # added 2016-01-02 scim = sc-im; # added 2016-01-22 + shared_mime_info = shared-mime-info; # added 2018-02-25 skrooge2 = skrooge; # added 2017-02-18 skype = skypeforlinux; # added 2017-07-27 spaceOrbit = space-orbit; # addewd 2016-05-23 speedtest_cli = speedtest-cli; # added 2015-02-17 + spice_gtk = spice-gtk; # added 2018-02-25 + spice_protocol = spice-protocol; # added 2018-02-25 sqliteInteractive = sqlite-interactive; # added 2014-12-06 sshfs = sshfs-fuse; # added 2017-08-14 sshfsFuse = sshfs-fuse; # added 2016-09 surf-webkit2 = surf; # added 2017-04-02 system_config_printer = system-config-printer; # added 2016-01-03 + telepathy_farstream = telepathy-farstream; # added 2018-02-25 + telepathy_gabble = telepathy-gabble; # added 2018-02-25 + telepathy_glib = telepathy-glib; # added 2018-02-25 + telepathy_haze = telepathy-haze; # added 2018-02-25 + telepathy_idle = telepathy-idle; # added 2018-02-25 + telepathy_logger = telepathy-logger; # added 2018-02-25 + telepathy_mission_control = telepathy-mission-control; # added 2018-02-25 + telepathy_qt = telepathy-qt; # added 2018-02-25 telepathy_qt5 = libsForQt5.telepathy; # added 2015-12-19 + telepathy_salut = telepathy-salut; # added 2018-02-25 tftp_hpa = tftp-hpa; # added 2015-04-03 transmission_gtk = transmission-gtk; # added 2018-01-06 transmission_remote_gtk = transmission-remote-gtk; # added 2018-01-06 diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index c2c6fd1122fa..e92cac440e93 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -121,7 +121,10 @@ with pkgs; dieHook = makeSetupHook {} ../build-support/setup-hooks/die.sh; - dockerTools = callPackage ../build-support/docker { }; + digitalbitbox = libsForQt5.callPackage ../applications/misc/digitalbitbox { }; + + # go 1.9 pin until https://github.com/moby/moby/pull/35739 + dockerTools = callPackage ../build-support/docker { go = go_1_9; }; docker_compose = pythonPackages.docker_compose; @@ -644,6 +647,8 @@ with pkgs; glyr = callPackage ../tools/audio/glyr { }; + imgpatchtools = callPackage ../development/mobile/imgpatchtools { }; + lastpass-cli = callPackage ../tools/security/lastpass-cli { }; pass = callPackage ../tools/security/pass { }; @@ -723,6 +728,8 @@ with pkgs; qt4Support = config.avahi.qt4Support or false; }; + avro-c = callPackage ../development/libraries/avro-c { }; + avro-cpp = callPackage ../development/libraries/avro-c++ { boost = boost160; }; aws = callPackage ../tools/virtualization/aws { }; @@ -1056,7 +1063,7 @@ with pkgs; devmem2 = callPackage ../os-specific/linux/devmem2 { }; - dbus-broker = callPackage ../os-specific/linux/dbus-broker {}; + dbus-broker = callPackage ../os-specific/linux/dbus-broker { }; ioport = callPackage ../os-specific/linux/ioport {}; @@ -1381,6 +1388,8 @@ with pkgs; arping = callPackage ../tools/networking/arping { }; + arpoison = callPackage ../tools/networking/arpoison { }; + asciidoc = callPackage ../tools/typesetting/asciidoc { inherit (python2Packages) matplotlib numpy aafigure recursivePthLoader; w3m = w3m-batch; @@ -1522,9 +1531,8 @@ with pkgs; nrg2iso = callPackage ../tools/cd-dvd/nrg2iso { }; libceph = ceph.lib; - ceph = callPackage ../tools/filesystems/ceph { boost = boost159; }; + ceph = callPackage ../tools/filesystems/ceph { boost = boost165; }; ceph-dev = ceph; - #ceph-dev = lowPrio (callPackage ../tools/filesystems/ceph/dev.nix { }); cfdg = callPackage ../tools/graphics/cfdg { ffmpeg = ffmpeg_2; @@ -1626,7 +1634,7 @@ with pkgs; libpinyin = callPackage ../development/libraries/libpinyin { }; libskk = callPackage ../development/libraries/libskk { - inherit (gnome3) gnome_common libgee; + inherit (gnome3) gnome-common libgee; }; m17n_db = callPackage ../tools/inputmethods/m17n-db { }; @@ -1851,7 +1859,7 @@ with pkgs; pythonPackages = python2Packages; }; - desktop_file_utils = callPackage ../tools/misc/desktop-file-utils { }; + desktop-file-utils = callPackage ../tools/misc/desktop-file-utils { }; dfc = callPackage ../tools/system/dfc { }; @@ -2027,6 +2035,10 @@ with pkgs; uudeview = callPackage ../tools/misc/uudeview { }; + uutils-coreutils = callPackage ../tools/misc/uutils-coreutils { + inherit (pythonPackages) sphinx; + }; + zabbix-cli = callPackage ../tools/misc/zabbix-cli { }; ### DEVELOPMENT / EMSCRIPTEN @@ -2666,11 +2678,11 @@ with pkgs; inherit (gnome2) libsoup; }; - gupnp_av = callPackage ../development/libraries/gupnp-av {}; + gupnp-av = callPackage ../development/libraries/gupnp-av {}; - gupnp_dlna = callPackage ../development/libraries/gupnp-dlna {}; + gupnp-dlna = callPackage ../development/libraries/gupnp-dlna {}; - gupnp_igd = callPackage ../development/libraries/gupnp-igd {}; + gupnp-igd = callPackage ../development/libraries/gupnp-igd {}; gupnp-tools = callPackage ../tools/networking/gupnp-tools {}; @@ -3062,7 +3074,9 @@ with pkgs; keepalived = callPackage ../tools/networking/keepalived { }; - kexectools = callPackage ../os-specific/linux/kexectools { }; + kexectools = if hostPlatform.isKexecable + then callPackage ../os-specific/linux/kexectools { } + else null; keybase = callPackage ../tools/security/keybase { }; @@ -3171,6 +3185,10 @@ with pkgs; matrix-synapse = callPackage ../servers/matrix-synapse { }; + mdbook = callPackage ../tools/text/mdbook { + inherit (darwin.apple_sdk.frameworks) CoreServices; + }; + memtester = callPackage ../tools/system/memtester { }; minidlna = callPackage ../tools/networking/minidlna { }; @@ -3247,13 +3265,12 @@ with pkgs; ninka = callPackage ../development/tools/misc/ninka { }; + nixnote2 = libsForQt5.callPackage ../applications/misc/nixnote2 { }; + nodejs = hiPrio nodejs-6_x; nodejs-slim = nodejs-slim-6_x; - nodejs-4_x = callPackage ../development/web/nodejs/v4.nix {}; - nodejs-slim-4_x = callPackage ../development/web/nodejs/v4.nix { enableNpm = false; }; - nodejs-6_x = callPackage ../development/web/nodejs/v6.nix {}; nodejs-slim-6_x = callPackage ../development/web/nodejs/v6.nix { enableNpm = false; }; @@ -3271,10 +3288,6 @@ with pkgs; nodejs = pkgs.nodejs-6_x; }; - nodePackages_4_x = callPackage ../development/node-packages/default-v4.nix { - nodejs = pkgs.nodejs-4_x; - }; - nodePackages = nodePackages_6_x; # Can be used as a user shell @@ -3693,9 +3706,11 @@ with pkgs; nbd = callPackage ../tools/networking/nbd { }; - nccl = callPackage ../development/libraries/science/math/nccl { - cudatoolkit = cudatoolkit8; - }; + inherit (callPackages ../development/libraries/science/math/nccl { }) + nccl_cudatoolkit8 + nccl_cudatoolkit9; + + nccl = nccl_cudatoolkit9; ndjbdns = callPackage ../tools/networking/ndjbdns { }; @@ -3752,19 +3767,19 @@ with pkgs; networkmanager = callPackage ../tools/networking/network-manager { }; - networkmanager_iodine = callPackage ../tools/networking/network-manager/iodine.nix { }; + networkmanager-iodine = callPackage ../tools/networking/network-manager/iodine.nix { }; - networkmanager_openvpn = callPackage ../tools/networking/network-manager/openvpn.nix { }; + networkmanager-openvpn = callPackage ../tools/networking/network-manager/openvpn.nix { }; - networkmanager_pptp = callPackage ../tools/networking/network-manager/pptp.nix { }; + networkmanager-pptp = callPackage ../tools/networking/network-manager/pptp.nix { }; - networkmanager_l2tp = callPackage ../tools/networking/network-manager/l2tp.nix { }; + networkmanager-l2tp = callPackage ../tools/networking/network-manager/l2tp.nix { }; - networkmanager_vpnc = callPackage ../tools/networking/network-manager/vpnc.nix { }; + networkmanager-vpnc = callPackage ../tools/networking/network-manager/vpnc.nix { }; - networkmanager_openconnect = callPackage ../tools/networking/network-manager/openconnect.nix { }; + networkmanager-openconnect = callPackage ../tools/networking/network-manager/openconnect.nix { }; - networkmanager_fortisslvpn = callPackage ../tools/networking/network-manager/fortisslvpn.nix { }; + networkmanager-fortisslvpn = callPackage ../tools/networking/network-manager/fortisslvpn.nix { }; networkmanager_strongswan = callPackage ../tools/networking/network-manager/strongswan.nix { }; @@ -3888,7 +3903,7 @@ with pkgs; nzbget = callPackage ../tools/networking/nzbget { }; - oathToolkit = callPackage ../tools/security/oath-toolkit { }; + oathToolkit = callPackage ../tools/security/oath-toolkit { inherit (gnome2) gtkdoc; }; obex_data_server = callPackage ../tools/bluetooth/obex-data-server { }; @@ -3961,6 +3976,8 @@ with pkgs; inherit (darwin.apple_sdk.frameworks) Carbon; }; + opensm = callPackage ../tools/networking/opensm { }; + openssh = callPackage ../tools/networking/openssh { hpnSupport = false; @@ -4028,8 +4045,12 @@ with pkgs; nix = nixUnstable; }; + packagekit-qt = libsForQt5.callPackage ../tools/package-management/packagekit/qt.nix { }; + packetdrill = callPackage ../tools/networking/packetdrill { }; + pacman = callPackage ../tools/package-management/pacman { }; + padthv1 = callPackage ../applications/audio/padthv1 { }; pakcs = callPackage ../development/compilers/pakcs {}; @@ -4463,7 +4484,7 @@ with pkgs; remmina = callPackage ../applications/networking/remote/remmina { adwaita-icon-theme = gnome3.adwaita-icon-theme; - gsettings_desktop_schemas = gnome3.gsettings_desktop_schemas; + gsettings-desktop-schemas = gnome3.gsettings-desktop-schemas; }; rename = callPackage ../tools/misc/rename { @@ -4607,10 +4628,16 @@ with pkgs; quazip = quazip_qt4; }; + screenkey = python2Packages.callPackage ../applications/video/screenkey { + inherit (gnome3) defaultIconTheme; + }; + quazip_qt4 = libsForQt5.quazip.override { qtbase = qt4; qmake = qmake4Hook; }; + scfbuild = python2.pkgs.callPackage ../tools/misc/scfbuild { }; + scrot = callPackage ../tools/graphics/scrot { }; scrypt = callPackage ../tools/security/scrypt { }; @@ -4689,6 +4716,8 @@ with pkgs; sisco.lv2 = callPackage ../applications/audio/sisco.lv2 { }; + sit = callPackage ../applications/version-management/sit { }; + skippy-xd = callPackage ../tools/X11/skippy-xd {}; sks = callPackage ../servers/sks { inherit (ocamlPackages_4_02) ocaml camlp4; }; @@ -5459,7 +5488,7 @@ with pkgs; xbursttools = assert stdenv ? glibc; callPackage ../tools/misc/xburst-tools rec { # It needs a cross compiler for mipsel to build the firmware it will # load into the Ben Nanonote - crossPrefix = "mips64el-unknown-linux-gnu"; + crossPrefix = "mipsel-unknown-linux-gnu"; gccCross = let pkgsCross = nixpkgsFun { @@ -5807,12 +5836,8 @@ with pkgs; gambit = callPackage ../development/compilers/gambit { }; gerbil = callPackage ../development/compilers/gerbil { }; - # !!! When updating to gcc7 everywhere we can get rid of the - # isRiscV overrides here and in gccCrossStageStatic - gccFun6 = callPackage ../development/compilers/gcc/6; - gccFun7 = callPackage ../development/compilers/gcc/7; - gccFun = if targetPlatform.isRiscV then gccFun7 else gccFun6; - gcc = if targetPlatform.isRiscV then gcc7 else gcc6; + gccFun = callPackage ../development/compilers/gcc/7; + gcc = gcc7; gcc-unwrapped = gcc.cc; gccStdenv = if stdenv.cc.isGNU then stdenv else stdenv.override { @@ -5823,6 +5848,8 @@ with pkgs; extraBuildInputs = lib.optional hostPlatform.isDarwin clang.cc; }; + gcc7Stdenv = overrideCC gccStdenv gcc7; + wrapCCMulti = cc: if system == "x86_64-linux" then let # Binutils with glibc multi @@ -5892,7 +5919,6 @@ with pkgs; bintools = binutils-unwrapped; libc = libcCross1; }; - isl = if targetPlatform.isRiscV then isl_0_17 else isl_0_14; in wrapCCWith { name = "gcc-cross-wrapper"; cc = gccFun { @@ -5900,7 +5926,7 @@ with pkgs; inherit noSysDirs; # PGO seems to speed up compilation by gcc by ~10%, see #445 discussion profiledCompiler = with stdenv; (!isDarwin && (isi686 || isx86_64)); - isl = if !stdenv.isDarwin then isl else null; + isl = if !stdenv.isDarwin then isl_0_17 else null; # just for stage static crossStageStatic = true; @@ -6005,7 +6031,7 @@ with pkgs; isl = isl_0_17; })); - gfortran = gfortran6; + gfortran = gfortran7; gfortran48 = wrapCC (gcc48.cc.override { name = "gfortran"; @@ -6202,23 +6228,15 @@ with pkgs; inherit (darwin.apple_sdk.frameworks) Security; }; - go_1_6 = callPackage ../development/compilers/go/1.6.nix { - inherit (darwin.apple_sdk.frameworks) Security Foundation; - }; - - go_1_7 = callPackage ../development/compilers/go/1.7.nix { - inherit (darwin.apple_sdk.frameworks) Security Foundation; - }; - - go_1_8 = callPackage ../development/compilers/go/1.8.nix { - inherit (darwin.apple_sdk.frameworks) Security Foundation; - }; - go_1_9 = callPackage ../development/compilers/go/1.9.nix { inherit (darwin.apple_sdk.frameworks) Security Foundation; }; - go = go_1_9; + go_1_10 = callPackage ../development/compilers/go/1.10.nix { + inherit (darwin.apple_sdk.frameworks) Security Foundation; + }; + + go = go_1_10; go-repo-root = callPackage ../development/tools/go-repo-root { }; @@ -6302,22 +6320,30 @@ with pkgs; (lib.addMetaAttrs { outputsToInstall = [ "jre" ]; } (openjdk7.jre // { outputs = [ "jre" ]; })); - jdk8 = if stdenv.isArm then oraclejdk8 else openjdk8 // { outputs = [ "out" ]; }; - jre8 = if stdenv.isArm then oraclejre8 else lib.setName "openjre-${lib.getVersion pkgs.openjdk8.jre}" + jdk8 = if stdenv.isArm || stdenv.isAarch64 then oraclejdk8 else openjdk8 // { outputs = [ "out" ]; }; + jre8 = if stdenv.isArm || stdenv.isAarch64 then oraclejre8 else lib.setName "openjre-${lib.getVersion pkgs.openjdk8.jre}" (lib.addMetaAttrs { outputsToInstall = [ "jre" ]; } (openjdk8.jre // { outputs = [ "jre" ]; })); jre8_headless = - if stdenv.isDarwin then jre8 else + if stdenv.isArm || stdenv.isAarch64 then + oraclejre8 + else if stdenv.isDarwin then + jre8 + else lib.setName "openjre-${lib.getVersion pkgs.openjdk8.jre}-headless" (lib.addMetaAttrs { outputsToInstall = [ "jre" ]; } ((openjdk8.override { minimal = true; }).jre // { outputs = [ "jre" ]; })); - jdk9 = openjdk9 // { outputs = [ "out" ]; }; - jre9 = lib.setName "openjre-${lib.getVersion pkgs.openjdk9.jre}" + jdk9 = if stdenv.isArm || stdenv.isAarch64 then oraclejdk9 else openjdk9 // { outputs = [ "out" ]; }; + jre9 = if stdenv.isArm || stdenv.isAarch64 then oraclejre9 else lib.setName "openjre-${lib.getVersion pkgs.openjdk9.jre}" (lib.addMetaAttrs { outputsToInstall = [ "jre" ]; } (openjdk9.jre // { outputs = [ "jre" ]; })); jre9_headless = - if stdenv.isDarwin then jre9 else + if stdenv.isArm || stdenv.isAarch64 then + oraclejre9 + else if stdenv.isDarwin then + jre9 + else lib.setName "openjre-${lib.getVersion pkgs.openjdk9.jre}-headless" (lib.addMetaAttrs { outputsToInstall = [ "jre" ]; } ((openjdk9.override { minimal = true; }).jre // { outputs = [ "jre" ]; })); @@ -6326,6 +6352,8 @@ with pkgs; jre = jre8; jre_headless = jre8_headless; + inherit (callPackages ../development/compilers/graalvm { }) mx jvmci8 graalvm8; + openshot-qt = libsForQt5.callPackage ../applications/video/openshot-qt { }; oraclejdk = pkgs.jdkdistro true false; @@ -6435,29 +6463,41 @@ with pkgs; stdenv = libcxxStdenv; }; - llvmPackages_34 = callPackage ../development/compilers/llvm/3.4 { + llvmPackages_34 = callPackage ../development/compilers/llvm/3.4 ({ isl = isl_0_12; - }; + } // stdenv.lib.optionalAttrs (stdenv.cc.isGNU && stdenv.hostPlatform.isi686) { + stdenv = overrideCC stdenv gcc6; + }); - llvmPackages_35 = callPackage ../development/compilers/llvm/3.5 { + llvmPackages_35 = callPackage ../development/compilers/llvm/3.5 ({ isl = isl_0_14; - }; + } // stdenv.lib.optionalAttrs (stdenv.cc.isGNU && stdenv.hostPlatform.isi686) { + stdenv = overrideCC stdenv gcc6; + }); - llvmPackages_37 = callPackage ../development/compilers/llvm/3.7 { + llvmPackages_37 = callPackage ../development/compilers/llvm/3.7 ({ inherit (stdenvAdapters) overrideCC; - }; + } // stdenv.lib.optionalAttrs (stdenv.cc.isGNU && stdenv.hostPlatform.isi686) { + stdenv = overrideCC stdenv gcc6; + }); - llvmPackages_38 = callPackage ../development/compilers/llvm/3.8 { + llvmPackages_38 = callPackage ../development/compilers/llvm/3.8 ({ inherit (stdenvAdapters) overrideCC; - }; + } // stdenv.lib.optionalAttrs (stdenv.cc.isGNU && stdenv.hostPlatform.isi686) { + stdenv = overrideCC stdenv gcc6; + }); - llvmPackages_39 = callPackage ../development/compilers/llvm/3.9 { + llvmPackages_39 = callPackage ../development/compilers/llvm/3.9 ({ inherit (stdenvAdapters) overrideCC; - }; + } // stdenv.lib.optionalAttrs (stdenv.cc.isGNU && stdenv.hostPlatform.isi686) { + stdenv = overrideCC stdenv gcc6; + }); - llvmPackages_4 = callPackage ../development/compilers/llvm/4 { + llvmPackages_4 = callPackage ../development/compilers/llvm/4 ({ inherit (stdenvAdapters) overrideCC; - }; + } // stdenv.lib.optionalAttrs (stdenv.cc.isGNU && stdenv.hostPlatform.isi686) { + stdenv = overrideCC stdenv gcc6; + }); llvmPackages_5 = callPackage ../development/compilers/llvm/5 ({ inherit (stdenvAdapters) overrideCC; @@ -6468,6 +6508,8 @@ with pkgs; }; libxml2 = libxml2.override { pythonSupport = false; }; python2 = callPackage ../development/interpreters/python/cpython/2.7/boot.nix { inherit (darwin) CF configd; }; + } // stdenv.lib.optionalAttrs (stdenv.cc.isGNU && stdenv.hostPlatform.isi686) { + stdenv = overrideCC stdenv gcc6; # with gcc-7: undefined reference to `__divmoddi4' }); manticore = callPackage ../development/compilers/manticore { }; @@ -6566,7 +6608,6 @@ with pkgs; ocsigen-i18n = callPackage ../development/tools/ocaml/ocsigen-i18n { }; opa = callPackage ../development/compilers/opa { - nodejs = nodejs-4_x; ocamlPackages = ocamlPackages_4_02; }; @@ -6589,7 +6630,10 @@ with pkgs; }; # For beta and nightly releases use the nixpkgs-mozilla overlay - rust = callPackage ../development/compilers/rust { }; + rust = callPackage ../development/compilers/rust + (stdenv.lib.optionalAttrs (stdenv.cc.isGNU && stdenv.hostPlatform.isi686) { + stdenv = overrideCC stdenv gcc6; # with gcc-7: undefined reference to `__divmoddi4' + }); inherit (rust) cargo rustc; buildRustCrate = callPackage ../build-support/rust/build-rust-crate.nix { }; @@ -6631,7 +6675,6 @@ with pkgs; sbclBootstrap = callPackage ../development/compilers/sbcl/bootstrap.nix {}; sbcl = callPackage ../development/compilers/sbcl {}; - scala_2_9 = callPackage ../development/compilers/scala/2.9.nix { }; scala_2_10 = callPackage ../development/compilers/scala/2.10.nix { }; scala_2_11 = callPackage ../development/compilers/scala/2.11.nix { }; scala_2_12 = callPackage ../development/compilers/scala { jre = jre8; }; @@ -6791,7 +6834,7 @@ with pkgs; clooj = callPackage ../development/interpreters/clojure/clooj.nix { }; - dhall = haskell.lib.justStaticExecutables haskellPackages.dhall; + dhall = callPackage ../development/interpreters/dhall { }; dhall-nix = haskell.lib.justStaticExecutables haskellPackages.dhall-nix; @@ -7103,7 +7146,8 @@ with pkgs; # racket 6.11 doesn't build with gcc6 + recent glibc: # https://github.com/racket/racket/pull/1886 # https://github.com/NixOS/nixpkgs/pull/31017#issuecomment-343574769 - stdenv = overrideCC stdenv gcc7; + stdenv = if stdenv.isDarwin then stdenv else gcc7Stdenv; + inherit (darwin.apple_sdk.frameworks) CoreFoundation; }; racket-minimal = callPackage ../development/interpreters/racket/minimal.nix { }; @@ -7115,6 +7159,8 @@ with pkgs; red = callPackage ../development/interpreters/red { }; + regextester = callPackage ../applications/misc/regextester { }; + regina = callPackage ../development/interpreters/regina { }; inherit (ocamlPackages) reason; @@ -7681,7 +7727,7 @@ with pkgs; global = callPackage ../development/tools/misc/global { }; - gnome_doc_utils = callPackage ../development/tools/documentation/gnome-doc-utils {}; + gnome-doc-utils = callPackage ../development/tools/documentation/gnome-doc-utils {}; gnome-desktop-testing = callPackage ../development/tools/gnome-desktop-testing {}; @@ -7717,7 +7763,7 @@ with pkgs; grail = callPackage ../development/libraries/grail { }; - gtk_doc = callPackage ../development/tools/documentation/gtk-doc { }; + gtk-doc = callPackage ../development/tools/documentation/gtk-doc { }; gtkdialog = callPackage ../development/tools/misc/gtkdialog { }; @@ -8228,6 +8274,8 @@ with pkgs; appstream-glib = callPackage ../development/libraries/appstream-glib { }; + appstream-qt = libsForQt5.callPackage ../development/libraries/appstream/qt.nix { }; + apr = callPackage ../development/libraries/apr { }; aprutil = callPackage ../development/libraries/apr-util { @@ -8258,9 +8306,9 @@ with pkgs; attr = callPackage ../development/libraries/attr { }; - at_spi2_core = callPackage ../development/libraries/at-spi2-core { }; + at-spi2-core = callPackage ../development/libraries/at-spi2-core { }; - at_spi2_atk = callPackage ../development/libraries/at-spi2-atk { }; + at-spi2-atk = callPackage ../development/libraries/at-spi2-atk { }; aqbanking = callPackage ../development/libraries/aqbanking { }; @@ -8296,6 +8344,10 @@ with pkgs; libopcodes = callPackage ../development/libraries/libopcodes { }; + # TODO(@Ericson2314): Build bionic libc from source + bionic = assert hostPlatform.useAndroidPrebuilt; + androidenv.androidndkPkgs.libraries; + bobcat = callPackage ../development/libraries/bobcat { }; boehmgc = callPackage ../development/libraries/boehm-gc { }; @@ -8400,7 +8452,7 @@ with pkgs; clutter-gst = callPackage ../development/libraries/clutter-gst { }; - clutter_gtk = callPackage ../development/libraries/clutter-gtk { }; + clutter-gtk = callPackage ../development/libraries/clutter-gtk { }; cminpack = callPackage ../development/libraries/cminpack { }; @@ -8476,7 +8528,7 @@ with pkgs; dbus = callPackage ../development/libraries/dbus { }; dbus_cplusplus = callPackage ../development/libraries/dbus-cplusplus { }; - dbus_glib = callPackage ../development/libraries/dbus-glib { }; + dbus-glib = callPackage ../development/libraries/dbus-glib { }; dbus_java = callPackage ../development/libraries/java/dbus-java { }; dbus-sharp-1_0 = callPackage ../development/libraries/dbus-sharp/dbus-sharp-1.0.nix { }; @@ -8800,12 +8852,13 @@ with pkgs; glfw2 = callPackage ../development/libraries/glfw/2.x.nix { }; glfw3 = callPackage ../development/libraries/glfw/3.x.nix { }; - glibc = callPackage ../development/libraries/glibc { + glibc_2_26 = callPackage ../development/libraries/glibc { installLocales = config.glibc.locales or false; }; glibc_2_27 = callPackage ../development/libraries/glibc/2.27.nix { installLocales = config.glibc.locales or false; }; + glibc = if hostPlatform.isRiscV then glibc_2_27 else glibc_2_26; glibc_memusage = callPackage ../development/libraries/glibc { installLocales = false; @@ -8831,6 +8884,7 @@ with pkgs; # libc is hackily often used from the previous stage. This `or` # hack fixes the hack, *sigh*. /**/ if name == "glibc" then targetPackages.glibcCross or glibcCross + else if name == "bionic" then targetPackages.bionic else if name == "uclibc" then uclibcCross else if name == "musl" then targetPackages.muslCross or muslCross else if name == "msvcrt" then targetPackages.windows.mingw_w64 or windows.mingw_w64 @@ -8849,7 +8903,6 @@ with pkgs; }; glm = callPackage ../development/libraries/glm { }; - glm_0954 = callPackage ../development/libraries/glm/0954.nix { }; globalplatform = callPackage ../development/libraries/globalplatform { }; gppcscconnectionplugin = @@ -8902,6 +8955,7 @@ with pkgs; }; goocanvas = callPackage ../development/libraries/goocanvas { }; + goocanvas2 = callPackage ../development/libraries/goocanvas/2.x.nix { }; google-gflags = callPackage ../development/libraries/google-gflags { }; @@ -8971,7 +9025,9 @@ with pkgs; gnu-config = callPackage ../development/libraries/gnu-config { }; - gnu-efi = callPackage ../development/libraries/gnu-efi { }; + gnu-efi = if hostPlatform.isEfi + then callPackage ../development/libraries/gnu-efi { } + else null; gnutls = callPackage (if stdenv.isDarwin @@ -9026,7 +9082,7 @@ with pkgs; }; glibmm = callPackage ../development/libraries/glibmm { }; - glib_networking = callPackage ../development/libraries/glib-networking {}; + glib-networking = callPackage ../development/libraries/glib-networking {}; ace = callPackage ../development/libraries/ace { }; @@ -9063,6 +9119,7 @@ with pkgs; gnome-sharp = callPackage ../development/libraries/gnome-sharp {}; granite = callPackage ../development/libraries/granite { }; + elementary-cmake-modules = callPackage ../development/libraries/elementary-cmake-modules { }; gtk2 = callPackage ../development/libraries/gtk+/2.x.nix { cupsSupport = config.gtk2.cups or stdenv.isLinux; @@ -9189,8 +9246,22 @@ with pkgs; hyena = callPackage ../development/libraries/hyena { }; - icu58 = callPackage ../development/libraries/icu/58.nix { }; - icu59 = callPackage ../development/libraries/icu/59.nix { }; + icu58 = callPackage (import ../development/libraries/icu/58.nix fetchurl) ({ + nativeBuildRoot = buildPackages.icu58.override { buildRootOnly = true; }; + } // + (stdenv.lib.optionalAttrs (stdenv.cc.isGNU && stdenv.hostPlatform.isi686) { + stdenv = overrideCC stdenv gcc6; # with gcc-7: undefined reference to `__divmoddi4' + })); + icu59 = callPackage ../development/libraries/icu/59.nix ({ + nativeBuildRoot = buildPackages.icu59.override { buildRootOnly = true; }; + } // (stdenv.lib.optionalAttrs (stdenv.cc.isGNU && stdenv.hostPlatform.isi686) { + stdenv = overrideCC stdenv gcc6; # with gcc-7: undefined reference to `__divmoddi4' + })); + icu60 = callPackage ../development/libraries/icu/60.nix ({ + nativeBuildRoot = buildPackages.icu60.override { buildRootOnly = true; }; + } // (stdenv.lib.optionalAttrs (stdenv.cc.isGNU && stdenv.hostPlatform.isi686) { + stdenv = overrideCC stdenv gcc6; # with gcc-7: undefined reference to `__divmoddi4' + })); icu = icu59; @@ -9259,7 +9330,7 @@ with pkgs; jshon = callPackage ../development/tools/parsing/jshon { }; - json_glib = callPackage ../development/libraries/json-glib { }; + json-glib = callPackage ../development/libraries/json-glib { }; json-c-0-11 = callPackage ../development/libraries/json-c/0.11.nix { }; # vulnerable json_c = callPackage ../development/libraries/json-c { }; @@ -9410,12 +9481,12 @@ with pkgs; }; libcanberra = callPackage ../development/libraries/libcanberra { }; - libcanberra_gtk3 = pkgs.libcanberra.override { gtk = pkgs.gtk3; }; - libcanberra_gtk2 = pkgs.libcanberra_gtk3.override { gtk = pkgs.gtk2; }; + libcanberra-gtk3 = pkgs.libcanberra.override { gtk = pkgs.gtk3; }; + libcanberra-gtk2 = pkgs.libcanberra-gtk3.override { gtk = pkgs.gtk2; }; libcanberra_kde = if (config.kde_runtime.libcanberraWithoutGTK or true) then pkgs.libcanberra - else pkgs.libcanberra_gtk2; + else pkgs.libcanberra-gtk2; libcec = callPackage ../development/libraries/libcec { }; libcec_platform = callPackage ../development/libraries/libcec/platform.nix { }; @@ -9587,14 +9658,10 @@ with pkgs; libgdata = gnome3.libgdata; - libgee_0_6 = callPackage ../development/libraries/libgee/0.6.nix { }; - - libgee_0_8 = callPackage ../development/libraries/libgee/0.8.nix { }; - libgig = callPackage ../development/libraries/libgig { }; - libgnome_keyring = callPackage ../development/libraries/libgnome-keyring { }; - libgnome_keyring3 = gnome3.libgnome_keyring; + libgnome-keyring = callPackage ../development/libraries/libgnome-keyring { }; + libgnome-keyring3 = gnome3.libgnome-keyring; libglvnd = callPackage ../development/libraries/libglvnd { }; @@ -9604,7 +9671,9 @@ with pkgs; libgroove = callPackage ../development/libraries/libgroove { }; - libseccomp = callPackage ../development/libraries/libseccomp { }; + libseccomp = if hostPlatform.isSeccomputable + then callPackage ../development/libraries/libseccomp { } + else null; libsecret = callPackage ../development/libraries/libsecret { }; @@ -9676,6 +9745,11 @@ with pkgs; libgpgerror = callPackage ../development/libraries/libgpg-error { }; + # https://github.com/gpg/libgpg-error/blob/70058cd9f944d620764e57c838209afae8a58c78/README#L118-L140 + libgpgerror-gen-posix-lock-obj = libgpgerror.override { + genPosixLockObjOnly = true; + }; + libgphoto2 = callPackage ../development/libraries/libgphoto2 { }; libgpod = callPackage ../development/libraries/libgpod { @@ -9864,6 +9938,8 @@ with pkgs; graphviz = graphviz-nox; }; + libinput-gestures = callPackage ../tools/inputmethods/libinput-gestures {}; + libisofs = callPackage ../development/libraries/libisofs { }; libisoburn = callPackage ../development/libraries/libisoburn { }; @@ -10456,8 +10532,12 @@ with pkgs; notify-sharp = callPackage ../development/libraries/notify-sharp { }; - ncurses5 = callPackage ../development/libraries/ncurses { abiVersion = "5"; }; - ncurses6 = callPackage ../development/libraries/ncurses { abiVersion = "6"; }; + ncurses5 = callPackage ../development/libraries/ncurses { + abiVersion = "5"; + }; + ncurses6 = callPackage ../development/libraries/ncurses { + abiVersion = "6"; + }; ncurses = ncurses6; neardal = callPackage ../development/libraries/neardal { }; @@ -10562,10 +10642,13 @@ with pkgs; opencv3 = callPackage ../development/libraries/opencv/3.x.nix { enableCuda = config.cudaSupport or false; - cudatoolkit = cudatoolkit8; inherit (darwin.apple_sdk.frameworks) AVFoundation Cocoa QTKit VideoDecodeAcceleration; }; + opencv3WithoutCuda = opencv3.override { + enableCuda = false; + }; + # this ctl version is needed by openexr_viewers openexr_ctl = ctl; @@ -10646,7 +10729,7 @@ with pkgs; osinfo-db = callPackage ../data/misc/osinfo-db { }; osinfo-db-tools = callPackage ../tools/misc/osinfo-db-tools { }; - p11_kit = callPackage ../development/libraries/p11-kit { }; + p11-kit = callPackage ../development/libraries/p11-kit { }; paperkey = callPackage ../tools/security/paperkey { }; @@ -10760,6 +10843,7 @@ with pkgs; }; postgis = callPackage ../development/libraries/postgis { }; + postgis_2_3 = callPackage ../development/libraries/postgis/2.3.nix { }; protobuf = callPackage ../development/libraries/protobuf/3.4.nix { }; @@ -11241,9 +11325,9 @@ with pkgs; inherit (pythonPackages) pyparsing; }; - spice_gtk = callPackage ../development/libraries/spice-gtk { }; + spice-gtk = callPackage ../development/libraries/spice-gtk { }; - spice_protocol = callPackage ../development/libraries/spice-protocol { }; + spice-protocol = callPackage ../development/libraries/spice-protocol { }; spice-up = callPackage ../applications/office/spice-up { }; @@ -11343,11 +11427,11 @@ with pkgs; tectonic = callPackage ../tools/typesetting/tectonic { }; - telepathy_glib = callPackage ../development/libraries/telepathy/glib { }; + telepathy-glib = callPackage ../development/libraries/telepathy/glib { }; - telepathy_farstream = callPackage ../development/libraries/telepathy/farstream {}; + telepathy-farstream = callPackage ../development/libraries/telepathy/farstream {}; - telepathy_qt = callPackage ../development/libraries/telepathy/qt { qtbase = qt4; }; + telepathy-qt = callPackage ../development/libraries/telepathy/qt { qtbase = qt4; }; tevent = callPackage ../development/libraries/tevent { python = python2; @@ -11540,6 +11624,7 @@ with pkgs; webkitgtk218x = callPackage ../development/libraries/webkitgtk/2.18.nix { harfbuzz = harfbuzz-icu; inherit (gst_all_1) gst-plugins-base gst-plugins-bad; + stdenv = overrideCC stdenv gcc6; }; webkitgtk24x-gtk2 = webkitgtk24x-gtk3.override { @@ -11819,18 +11904,6 @@ with pkgs; ### DEVELOPMENT / GO MODULES - buildGo16Package = callPackage ../development/go-modules/generic { - go = go_1_6; - }; - - buildGo17Package = callPackage ../development/go-modules/generic { - go = go_1_7; - }; - - buildGo18Package = callPackage ../development/go-modules/generic { - go = go_1_8; - }; - buildGo19Package = callPackage ../development/go-modules/generic { go = go_1_9; }; @@ -12459,6 +12532,8 @@ with pkgs; pyMAILt = callPackage ../servers/xmpp/pyMAILt {}; + pypolicyd-spf = python3.pkgs.callPackage ../servers/mail/pypolicyd-spf { }; + qpid-cpp = callPackage ../servers/amqp/qpid-cpp { boost = boost155; }; @@ -12611,7 +12686,7 @@ with pkgs; shaarli-material = callPackage ../servers/web-apps/shaarli/material-theme.nix { }; - piwik = callPackage ../servers/web-apps/piwik { }; + matomo = callPackage ../servers/web-apps/matomo { }; axis2 = callPackage ../servers/http/tomcat/axis2 { }; @@ -12646,7 +12721,7 @@ with pkgs; xorg = recurseIntoAttrs (lib.callPackagesWith pkgs ../servers/x11/xorg/default.nix { inherit clangStdenv fetchurl fetchgit fetchpatch stdenv intltool freetype fontconfig - libxslt expat libpng zlib perl mesa_drivers spice_protocol libunwind + libxslt expat libpng zlib perl mesa_drivers spice-protocol libunwind dbus libuuid openssl gperf m4 libevdev tradcpp libinput mcpp makeWrapper autoreconfHook autoconf automake libtool mtdev pixman cairo epoxy; @@ -12756,10 +12831,7 @@ with pkgs; cifs-utils = callPackage ../os-specific/linux/cifs-utils { }; - cockroachdb = callPackage ../servers/sql/cockroachdb { - # Go 1.9 build fails with "go1.8.* required (see CONTRIBUTING.md)". - buildGoPackage = buildGo18Package; - }; + cockroachdb = callPackage ../servers/sql/cockroachdb { }; conky = callPackage ../os-specific/linux/conky ({ lua = lua5_1; # conky can use 5.2, but toluapp can not @@ -12995,8 +13067,7 @@ with pkgs; lkl = callPackage ../applications/virtualization/lkl { }; inherit (callPackages ../os-specific/linux/kernel-headers { }) - linuxHeaders_4_4 linuxHeaders_4_15; - linuxHeaders = if hostPlatform.isMusl || hostPlatform.isRiscV then linuxHeaders_4_15 else linuxHeaders_4_4; + linuxHeaders; kernelPatches = callPackage ../os-specific/linux/kernel/patches.nix { }; @@ -13067,22 +13138,6 @@ with pkgs; ]; }; - linux_4_13 = callPackage ../os-specific/linux/kernel/linux-4.13.nix { - kernelPatches = - [ kernelPatches.bridge_stp_helper - kernelPatches.p9_fixes - # See pkgs/os-specific/linux/kernel/cpu-cgroup-v2-patches/README.md - # when adding a new linux version - kernelPatches.cpu-cgroup-v2."4.11" - kernelPatches.modinst_arg_list_too_long - ] - ++ lib.optionals ((platform.kernelArch or null) == "mips") - [ kernelPatches.mips_fpureg_emu - kernelPatches.mips_fpu_sigill - kernelPatches.mips_ext3_n32 - ]; - }; - linux_4_14 = callPackage ../os-specific/linux/kernel/linux-4.14.nix { kernelPatches = [ kernelPatches.bridge_stp_helper @@ -13140,13 +13195,7 @@ with pkgs; kernelPatches = [ kernelPatches.bridge_stp_helper kernelPatches.modinst_arg_list_too_long - ] ++ lib.optionals hostPlatform.isRiscV [ - kernelPatches.riscv_modules - kernelPatches.riscv_irq_busy - kernelPatches.riscv_install - kernelPatches.riscv_initrd - kernelPatches.riscv_initrd_free - ]; + ]; }; linux_samus_4_12 = callPackage ../os-specific/linux/kernel/linux-samus-4.12.nix { @@ -13157,7 +13206,7 @@ with pkgs; # when adding a new linux version kernelPatches.cpu-cgroup-v2."4.11" kernelPatches.modinst_arg_list_too_long - ]; + ]; }; /* Linux kernel modules are inherently tied to a specific kernel. So @@ -13232,10 +13281,14 @@ with pkgs; ply = callPackage ../os-specific/linux/ply { }; + rtl8192eu = callPackage ../os-specific/linux/rtl8192eu { }; + rtl8723bs = callPackage ../os-specific/linux/rtl8723bs { }; rtl8812au = callPackage ../os-specific/linux/rtl8812au { }; + rtl8814au = callPackage ../os-specific/linux/rtl8814au { }; + rtlwifi_new = callPackage ../os-specific/linux/rtlwifi_new { }; openafs = callPackage ../servers/openafs/module.nix { }; @@ -13303,7 +13356,7 @@ with pkgs; }); # The current default kernel / kernel modules. - linuxPackages = linuxPackages_4_9; + linuxPackages = linuxPackages_4_14; linux = linuxPackages.kernel; # Update this when adding the newest kernel major version! @@ -13316,7 +13369,6 @@ with pkgs; linuxPackages_rpi = linuxPackagesFor pkgs.linux_rpi; linuxPackages_4_4 = recurseIntoAttrs (linuxPackagesFor pkgs.linux_4_4); linuxPackages_4_9 = recurseIntoAttrs (linuxPackagesFor pkgs.linux_4_9); - linuxPackages_4_13 = recurseIntoAttrs (linuxPackagesFor pkgs.linux_4_13); linuxPackages_4_14 = recurseIntoAttrs (linuxPackagesFor pkgs.linux_4_14); linuxPackages_4_15 = recurseIntoAttrs (linuxPackagesFor pkgs.linux_4_15); # Don't forget to update linuxPackages_latest! @@ -13741,7 +13793,7 @@ with pkgs; udisks1 = callPackage ../os-specific/linux/udisks/1-default.nix { }; udisks2 = callPackage ../os-specific/linux/udisks/2-default.nix { }; - udisks = udisks1; + udisks = udisks2; udisks_glue = callPackage ../os-specific/linux/udisks-glue { }; @@ -13966,7 +14018,6 @@ with pkgs; emojione = callPackage ../data/fonts/emojione { inherit (nodePackages) svgo; - inherit (pythonPackages) scfbuild; }; encode-sans = callPackage ../data/fonts/encode-sans { }; @@ -13982,7 +14033,8 @@ with pkgs; fira-mono = callPackage ../data/fonts/fira-mono { }; - font-awesome-ttf = callPackage ../data/fonts/font-awesome-ttf { }; + font-awesome_4 = callPackage ../data/fonts/font-awesome-4 { }; + font-awesome_5 = callPackage ../data/fonts/font-awesome-5 { }; freefont_ttf = callPackage ../data/fonts/freefont-ttf { }; @@ -14000,7 +14052,7 @@ with pkgs; gnome_user_docs = callPackage ../data/documentation/gnome-user-docs { }; - inherit (gnome3) gsettings_desktop_schemas; + inherit (gnome3) gsettings-desktop-schemas; go-font = callPackage ../data/fonts/go-font { }; @@ -14010,7 +14062,7 @@ with pkgs; helvetica-neue-lt-std = callPackage ../data/fonts/helvetica-neue-lt-std { }; - hicolor_icon_theme = callPackage ../data/icons/hicolor-icon-theme { }; + hicolor-icon-theme = callPackage ../data/icons/hicolor-icon-theme { }; hanazono = callPackage ../data/fonts/hanazono { }; @@ -14099,7 +14151,7 @@ with pkgs; media-player-info = callPackage ../data/misc/media-player-info {}; - mobile_broadband_provider_info = callPackage ../data/misc/mobile-broadband-provider-info { }; + mobile-broadband-provider-info = callPackage ../data/misc/mobile-broadband-provider-info { }; monoid = callPackage ../data/fonts/monoid { }; @@ -14180,7 +14232,7 @@ with pkgs; mime-types = callPackage ../data/misc/mime-types { }; - shared_mime_info = callPackage ../data/misc/shared-mime-info { }; + shared-mime-info = callPackage ../data/misc/shared-mime-info { }; shared_desktop_ontologies = callPackage ../data/misc/shared-desktop-ontologies { }; @@ -14280,7 +14332,6 @@ with pkgs; twemoji-color-font = callPackage ../data/fonts/twemoji-color-font { inherit (nodePackages) svgo; - inherit (pythonPackages) scfbuild; }; tzdata = callPackage ../data/misc/tzdata { }; @@ -14504,12 +14555,10 @@ with pkgs; autopanosiftc = callPackage ../applications/graphics/autopanosiftc { }; - avidemux_unwrapped = callPackage ../applications/video/avidemux { - libva = libva-full; # also wants libva-x11 + avidemux = libsForQt5.callPackage ../applications/video/avidemux { + libva = libva-full; }; - avidemux = callPackage ../applications/video/avidemux/wrapper.nix { }; - avogadro = callPackage ../applications/science/chemistry/avogadro { eigen = eigen2; }; @@ -14614,6 +14663,7 @@ with pkgs; blender = callPackage ../applications/misc/blender { cudaSupport = config.cudaSupport or false; python = python35; + stdenv = overrideCC stdenv gcc6; }; bluefish = callPackage ../applications/editors/bluefish { @@ -14662,7 +14712,10 @@ with pkgs; openjpeg = openjpeg_1; }; - perkeep = callPackage ../applications/misc/perkeep { }; + perkeep = callPackage ../applications/misc/perkeep { + # Perkeep is very particular about which go version to build with. + go = go_1_9; + }; canto-curses = callPackage ../applications/networking/feedreaders/canto-curses { }; @@ -14728,7 +14781,7 @@ with pkgs; cinelerra = callPackage ../applications/video/cinelerra { }; claws-mail = callPackage ../applications/networking/mailreaders/claws-mail { - inherit (gnome3) gsettings_desktop_schemas; + inherit (gnome3) gsettings-desktop-schemas; inherit (xorg) libSM; enableNetworkManager = config.networking.networkmanager.enable or false; }; @@ -14842,7 +14895,10 @@ with pkgs; pulseSupport = config.pulseaudio or true; }; - deadbeef-mpris2-plugin = callPackage ../applications/audio/deadbeef/plugins/mpris2.nix { }; + deadbeefPlugins = { + mpris2 = callPackage ../applications/audio/deadbeef/plugins/mpris2.nix { }; + opus = callPackage ../applications/audio/deadbeef/plugins/opus.nix { }; + }; deadbeef-with-plugins = callPackage ../applications/audio/deadbeef/wrapper.nix { plugins = []; @@ -14884,7 +14940,8 @@ with pkgs; dmtx-utils = callPackage (callPackage ../tools/graphics/dmtx-utils) { }; - inherit (callPackage ../applications/virtualization/docker { }) + # go 1.9 pin until https://github.com/moby/moby/pull/35739 + inherit (callPackage ../applications/virtualization/docker { go = go_1_9; }) docker_17_12 docker_18_02; @@ -15230,7 +15287,7 @@ with pkgs; keepassxc = libsForQt5.callPackage ../applications/misc/keepassx/community.nix { }; inherit (gnome3) evince; - evolution_data_server = gnome3.evolution_data_server; + evolution-data-server = gnome3.evolution-data-server; keepass = callPackage ../applications/misc/keepass { buildDotnetPackage = buildDotnetPackage.override { mono = mono54; }; @@ -15238,10 +15295,11 @@ with pkgs; keepass-keeagent = callPackage ../applications/misc/keepass-plugins/keeagent { }; - keepass-keefox = callPackage ../applications/misc/keepass-plugins/keefox { }; - keepass-keepasshttp = callPackage ../applications/misc/keepass-plugins/keepasshttp { }; + keepass-keepassrpc = callPackage ../applications/misc/keepass-plugins/keepassrpc { }; + keepass-keefox = keepass-keepassrpc; # backwards compatibility alias, added 2018-02 + exrdisplay = callPackage ../applications/graphics/exrdisplay { }; exrtools = callPackage ../applications/graphics/exrtools { }; @@ -15759,6 +15817,11 @@ with pkgs; gv = callPackage ../applications/misc/gv { }; + gutenberg = callPackage ../applications/misc/gutenberg { + inherit (darwin.apple_sdk.frameworks) CoreServices; + inherit (darwin) cf-private; + }; + guvcview = callPackage ../os-specific/linux/guvcview { pulseaudioSupport = config.pulseaudio or true; ffmpeg = ffmpeg_2; @@ -16024,6 +16087,7 @@ with pkgs; k3d = callPackage ../applications/graphics/k3d { inherit (pkgs.gnome2) gtkglext; + stdenv = overrideCC stdenv gcc6; }; k9copy = libsForQt5.callPackage ../applications/video/k9copy {}; @@ -16188,7 +16252,6 @@ with pkgs; inherit (gnome2) GConf ORBit2 gnome_vfs; inherit (gnome3) defaultIconTheme; zip = zip.override { enableNLS = false; }; - #glm = glm_0954; bluez5 = bluez5_28; fontsConf = makeFontsConf { fontDirectories = [ @@ -16207,7 +16270,7 @@ with pkgs; liferea = callPackage ../applications/networking/newsreaders/liferea { - inherit (gnome3) libpeas gsettings_desktop_schemas dconf; + inherit (gnome3) libpeas gsettings-desktop-schemas dconf; }; lightworks = callPackage ../applications/video/lightworks { @@ -16231,6 +16294,8 @@ with pkgs; lighttable = callPackage ../applications/editors/lighttable {}; + libdsk = callPackage ../misc/emulators/libdsk { }; + links2 = callPackage ../applications/networking/browsers/links2 { }; linphone = callPackage ../applications/networking/instant-messengers/linphone rec { @@ -16484,11 +16549,19 @@ with pkgs; }; mpv = callPackage ../applications/video/mpv rec { - lua = lua5_1; - lua5_sockets = lua5_1_sockets; + inherit (luaPackages) luasocket; youtube-dl = pythonPackages.youtube-dl; - libva = libva-full; - waylandSupport = stdenv.isLinux; + libva = libva-full; + waylandSupport = stdenv.isLinux; + alsaSupport = !stdenv.isDarwin; + pulseSupport = !stdenv.isDarwin; + rubberbandSupport = !stdenv.isDarwin; + dvdreadSupport = !stdenv.isDarwin; + dvdnavSupport = !stdenv.isDarwin; + drmSupport = !stdenv.isDarwin; + x11Support = !stdenv.isDarwin; + xineramaSupport = !stdenv.isDarwin; + xvSupport = !stdenv.isDarwin; }; mpvScripts = { @@ -16735,7 +16808,9 @@ with pkgs; openfx = callPackage ../development/libraries/openfx {}; - openimageio = callPackage ../applications/graphics/openimageio { }; + openimageio = callPackage ../applications/graphics/openimageio { + stdenv = overrideCC stdenv gcc6; + }; openjump = callPackage ../applications/misc/openjump { }; @@ -16744,7 +16819,7 @@ with pkgs; opera = callPackage ../applications/networking/browsers/opera {}; orca = python3Packages.callPackage ../applications/misc/orca { - inherit (gnome3) yelp_tools; + inherit (gnome3) yelp-tools; }; osm2xmap = callPackage ../applications/misc/osm2xmap { @@ -16900,7 +16975,7 @@ with pkgs; pinfo = callPackage ../applications/misc/pinfo { }; pinpoint = callPackage ../applications/office/pinpoint { - inherit (gnome3) clutter clutter_gtk; + inherit (gnome3) clutter clutter-gtk; }; pinta = callPackage ../applications/graphics/pinta { @@ -17162,6 +17237,8 @@ with pkgs; rofi-menugen = callPackage ../applications/misc/rofi-menugen { }; + rpcs3 = libsForQt5.callPackage ../misc/emulators/rpcs3 { }; + rstudio = libsForQt5.callPackage ../applications/editors/rstudio { }; rsync = callPackage ../applications/networking/sync/rsync { @@ -17499,8 +17576,6 @@ with pkgs; syncthing-gtk = python2Packages.callPackage ../applications/networking/syncthing-gtk { }; - syncthing-inotify = callPackage ../applications/networking/syncthing/inotify.nix { }; - syncthing-tray = callPackage ../applications/misc/syncthing-tray { }; # linux only by now @@ -17545,17 +17620,17 @@ with pkgs; telegram-cli = callPackage ../applications/networking/instant-messengers/telegram/telegram-cli { }; - telepathy_gabble = callPackage ../applications/networking/instant-messengers/telepathy/gabble { }; + telepathy-gabble = callPackage ../applications/networking/instant-messengers/telepathy/gabble { }; - telepathy_haze = callPackage ../applications/networking/instant-messengers/telepathy/haze {}; + telepathy-haze = callPackage ../applications/networking/instant-messengers/telepathy/haze {}; - telepathy_logger = callPackage ../applications/networking/instant-messengers/telepathy/logger {}; + telepathy-logger = callPackage ../applications/networking/instant-messengers/telepathy/logger {}; - telepathy_mission_control = callPackage ../applications/networking/instant-messengers/telepathy/mission-control { }; + telepathy-mission-control = callPackage ../applications/networking/instant-messengers/telepathy/mission-control { }; - telepathy_salut = callPackage ../applications/networking/instant-messengers/telepathy/salut {}; + telepathy-salut = callPackage ../applications/networking/instant-messengers/telepathy/salut {}; - telepathy_idle = callPackage ../applications/networking/instant-messengers/telepathy/idle {}; + telepathy-idle = callPackage ../applications/networking/instant-messengers/telepathy/idle {}; termdown = (newScope pythonPackages) ../applications/misc/termdown { }; @@ -17566,7 +17641,7 @@ with pkgs; }; lxterminal = callPackage ../applications/misc/lxterminal { - vte = gnome2.vte; + vte = gnome3.vte; }; deepin-terminal = callPackage ../applications/misc/deepin-terminal { @@ -17812,7 +17887,6 @@ with pkgs; virtmanager = callPackage ../applications/virtualization/virt-manager { vte = gnome3.vte; dconf = gnome3.dconf; - spice_gtk = spice_gtk; system-libvirt = libvirt; }; @@ -17944,6 +18018,8 @@ with pkgs; wayv = callPackage ../tools/X11/wayv {}; + webtorrent_desktop = callPackage ../applications/video/webtorrent_desktop {}; + weechat = callPackage ../applications/networking/irc/weechat { inherit (darwin) libobjc; inherit (darwin) libresolv; @@ -18306,7 +18382,7 @@ with pkgs; roxterm = callPackage ../applications/misc/roxterm { inherit (pythonPackages) lockfile; - inherit (gnome3) gsettings_desktop_schemas vte; + inherit (gnome3) gsettings-desktop-schemas vte; }; xtrace = callPackage ../tools/X11/xtrace { }; @@ -18411,7 +18487,9 @@ with pkgs; armagetronad = callPackage ../games/armagetronad { }; - arx-libertatis = callPackage ../games/arx-libertatis { }; + arx-libertatis = callPackage ../games/arx-libertatis { + stdenv = overrideCC stdenv gcc6; + }; asc = callPackage ../games/asc { lua = lua5_1; @@ -18516,7 +18594,7 @@ with pkgs; digikam = libsForQt5.callPackage ../applications/graphics/digikam { inherit (plasma5) oxygen; inherit (kdeApplications) kcalcore; - opencv3 = opencv3.override { enableContrib = true; }; + opencv3 = opencv3WithoutCuda; }; displaycal = (newScope pythonPackages) ../applications/graphics/displaycal {}; @@ -18765,9 +18843,7 @@ with pkgs; openmw = callPackage ../games/openmw { }; - openmw-tes3mp = libsForQt5.callPackage ../games/openmw/tes3mp.nix { - stdenv = overrideCC stdenv gcc7; - }; + openmw-tes3mp = libsForQt5.callPackage ../games/openmw/tes3mp.nix { }; openra = callPackage ../games/openra { lua = lua5_1; }; @@ -18893,6 +18969,8 @@ with pkgs; sienna = callPackage ../games/sienna { love = love_0_10; }; + sil = callPackage ../games/sil { }; + simutrans = callPackage ../games/simutrans { }; # get binaries without data built by Hydra simutrans_binaries = lowPrio simutrans.binaries; @@ -19133,10 +19211,10 @@ with pkgs; } // { inherit (pkgs) # GTK Libs - glib glibmm atk atkmm cairo pango pangomm gdk_pixbuf gtkmm2 libcanberra_gtk2 + glib glibmm atk atkmm cairo pango pangomm gdk_pixbuf gtkmm2 libcanberra-gtk2 # Included for backwards compatibility - libsoup libwnck gtk_doc gnome_doc_utils; + libsoup libwnck gtk-doc gnome-doc-utils; gtk = self.gtk2; gtkmm = self.gtkmm2; @@ -19154,7 +19232,7 @@ with pkgs; icon-hider = callPackage ../desktops/gnome-3/extensions/icon-hider { }; mediaplayer = callPackage ../desktops/gnome-3/extensions/mediaplayer { }; nohotcorner = callPackage ../desktops/gnome-3/extensions/nohotcorner { }; - pixel-saver = callPackage ../desktops/gnome-3/extensions/pixel-saver { }; + no-title-bar = callPackage ../desktops/gnome-3/extensions/no-title-bar { }; remove-dropdown-arrows = callPackage ../desktops/gnome-3/extensions/remove-dropdown-arrows { }; taskwhisperer = callPackage ../desktops/gnome-3/extensions/taskwhisperer { }; topicons-plus = callPackage ../desktops/gnome-3/extensions/topicons-plus { }; @@ -19202,7 +19280,7 @@ with pkgs; gtk-engine-murrine = callPackage ../misc/themes/gtk2/gtk-engine-murrine { }; - gnome_themes_standard = gnome3.gnome_themes_standard; + gnome-themes-standard = gnome3.gnome-themes-standard; numix-gtk-theme = callPackage ../misc/themes/numix { }; @@ -19228,7 +19306,7 @@ with pkgs; mkPlasma5 = import ../desktops/plasma-5; attrs = { inherit libsForQt5 lib fetchurl; - inherit (gnome3) gconf gsettings_desktop_schemas; + inherit (gnome3) gconf gsettings-desktop-schemas; }; in recurseIntoAttrs (makeOverridable mkPlasma5 attrs); @@ -19242,7 +19320,7 @@ with pkgs; kwallet-pam kwayland-integration kwin kwrited milou oxygen plasma-desktop plasma-integration plasma-nm plasma-pa plasma-vault plasma-workspace plasma-workspace-wallpapers polkit-kde-agent powerdevil sddm-kcm - systemsettings; + systemsettings user-manager xdg-desktop-portal-kde; ### SCIENCE @@ -19681,6 +19759,8 @@ with pkgs; caffe = callPackage ../applications/science/math/caffe rec { cudaSupport = config.caffe.cudaSupport or config.cudaSupport or false; cudnnSupport = cudaSupport; + # Used only for image loading. + opencv3 = opencv3WithoutCuda; }; caffe2 = callPackage ../development/libraries/science/math/caffe2 { @@ -19688,14 +19768,16 @@ with pkgs; inherit (python3Packages) python future six numpy pydot; protobuf = protobuf3_1; python-protobuf = python3Packages.protobuf3_1; + # Used only for image loading. + opencv3 = opencv3WithoutCuda; }; cntk = callPackage ../applications/science/math/cntk rec { cudaSupport = pkgs.config.cudaSupport or false; cudnnSupport = cudaSupport; inherit (linuxPackages) nvidia_x11; - cudatoolkit = cudatoolkit8; - cudnn = cudnn6_cudatoolkit8; + # Used only for image loading. + opencv3 = opencv3WithoutCuda; }; ecm = callPackage ../applications/science/math/ecm { }; @@ -19911,6 +19993,8 @@ with pkgs; cups-toshiba-estudio = callPackage ../misc/cups/drivers/estudio {}; + cups-zj-58 = callPackage ../misc/cups/drivers/zj-58 { }; + crashplan = callPackage ../applications/backup/crashplan { }; crashplansb = callPackage ../applications/backup/crashplan/crashplan-small-business.nix { inherit (gnome3) gconf; }; @@ -20624,6 +20708,8 @@ with pkgs; zsnes = callPackage_i686 ../misc/emulators/zsnes { }; + xcpc = callPackage ../misc/emulators/xcpc { }; + zxcvbn-c = callPackage ../development/libraries/zxcvbn-c { }; snes9x-gtk = callPackage ../misc/emulators/snes9x-gtk { }; @@ -20673,6 +20759,10 @@ with pkgs; iterm2 = callPackage ../applications/misc/iterm2 {}; + sequeler = callPackage ../applications/misc/sequeler { + inherit (gnome3) gtksourceview libgda libgee; + }; + sequelpro = callPackage ../applications/misc/sequelpro {}; maphosts = callPackage ../tools/networking/maphosts {}; @@ -20755,7 +20845,7 @@ with pkgs; tlwg = callPackage ../data/fonts/tlwg { }; - safeDiscardStringContext = callPackage ../build-support/safe-discard-string-context.nix { }; - simplehttp2server = callPackage ../servers/simplehttp2server { }; + + diceware = callPackage ../tools/security/diceware { }; } diff --git a/pkgs/top-level/lua-packages.nix b/pkgs/top-level/lua-packages.nix index d80c43b03f52..a589ceb7e0c9 100644 --- a/pkgs/top-level/lua-packages.nix +++ b/pkgs/top-level/lua-packages.nix @@ -9,7 +9,7 @@ , pcre, oniguruma, gnulib, tre, glibc, sqlite, openssl, expat, cairo , perl, gtk2, python, glib, gobjectIntrospection, libevent, zlib, autoreconfHook , mysql, postgresql, cyrus_sasl -, fetchFromGitHub, libmpack, which, fetchpatch +, fetchFromGitHub, libmpack, which, fetchpatch, writeText }: let @@ -35,7 +35,9 @@ let getLuaCPath = lib : getPath lib "so"; #define build lua package function - buildLuaPackage = callPackage ../development/lua-modules/generic lua; + buildLuaPackage = callPackage ../development/lua-modules/generic { + inherit lua writeText; + }; luarocks = callPackage ../development/tools/misc/luarocks { inherit lua; diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix index 10eb72da19eb..03c24de57d4e 100644 --- a/pkgs/top-level/ocaml-packages.nix +++ b/pkgs/top-level/ocaml-packages.nix @@ -194,9 +194,7 @@ let then callPackage ../development/ocaml-modules/csv { } else callPackage ../development/ocaml-modules/csv/1.5.nix { }; - curses = callPackage ../development/ocaml-modules/curses { - ncurses = pkgs.ncurses5; - }; + curses = callPackage ../development/ocaml-modules/curses { }; custom_printf = callPackage ../development/ocaml-modules/custom_printf { }; diff --git a/pkgs/top-level/perl-packages.nix b/pkgs/top-level/perl-packages.nix index 99dfaf00341a..815bf73210f6 100644 --- a/pkgs/top-level/perl-packages.nix +++ b/pkgs/top-level/perl-packages.nix @@ -4848,10 +4848,10 @@ let self = _self // overrides; _self = with self; { }; Encode = buildPerlPackage rec { - name = "Encode-2.96"; + name = "Encode-2.97"; src = fetchurl { url = "mirror://cpan/authors/id/D/DA/DANKOGAI/${name}.tar.gz"; - sha256 = "5dcb19fa5e62c6ca9294f28e9f4676f36477b1025f7e0dca92479633334b3cb1"; + sha256 = "044d2fc743bdf5ce4509a0e717a7adb31d488dafae63fde794f57a9f47b2ecb7"; }; meta = { description = "Character encodings in Perl"; @@ -6331,10 +6331,12 @@ let self = _self // overrides; _self = with self; { }; propagatedBuildInputs = [ ExtUtilsDepends ExtUtilsPkgConfig Glib Gtk2 Pango pkgs.gnome2.libglade pkgs.gtk2 ]; meta = { + homepage = https://metacpan.org/pod/Gtk2::GladeXML; description = "Create user interfaces directly from Glade XML files"; + license = stdenv.lib.licenses.lgpl2Plus; }; }; - + Gtk2TrayIcon = buildPerlPackage rec { name = "Gtk2-TrayIcon-0.06"; src = fetchurl { @@ -7117,10 +7119,10 @@ let self = _self // overrides; _self = with self; { }; Importer = buildPerlPackage rec { - name = "Importer-0.024"; + name = "Importer-0.025"; src = fetchurl { url = "mirror://cpan/authors/id/E/EX/EXODIST/${name}.tar.gz"; - sha256 = "1d19760ceb366b664985ace9a7ee1b54a438b1e060a5bca6eff0c6a35b07a557"; + sha256 = "0745138c487d74033d0cbeb36f06595036dc7e688f1a5dbec9cc2fa799e13946"; }; meta = { description = "Alternative but compatible interface to modules that export symbols"; @@ -7474,16 +7476,16 @@ let self = _self // overrides; _self = with self; { ImageExifTool = buildPerlPackage rec { name = "Image-ExifTool-${version}"; - version = "10.60"; + version = "10.80"; src = fetchurl { - url = "http://www.sno.phy.queensu.ca/~phil/exiftool/${name}.tar.gz"; - sha256 = "1ymcnxf8miw0c1nadpxmvzabmaz837afrwp1k5khhv0s1vv8h2fz"; + url = "https://www.sno.phy.queensu.ca/~phil/exiftool/${name}.tar.gz"; + sha256 = "14rwr5wk2snqv4yva6fax1gfsdv88941n237m0wyzn3n0xh9dy5w"; }; meta = with stdenv.lib; { description = "ExifTool, a tool to read, write and edit EXIF meta information"; - homepage = http://www.sno.phy.queensu.ca/~phil/exiftool/; + homepage = https://www.sno.phy.queensu.ca/~phil/exiftool/; longDescription = '' ExifTool is a platform-independent Perl library plus a command-line @@ -8473,6 +8475,27 @@ let self = _self // overrides; _self = with self; { }; }; + MailSendmail = buildPerlPackage rec { + name = "Mail-Sendmail-0.80"; + src = fetchurl { + url = "mirror://cpan/authors/id/N/NE/NEILB/Mail-Sendmail-0.80.tar.gz"; + sha256 = "1r38qbkj7jwj8cqy1rnqzkk81psxi08b1aiq392817f3bk5ri2jv"; + }; + propagatedBuildInputs = [ DigestMD5 MIMEBase64 Socket TimeLocal ]; + # The test suite simply loads the module and attempts to send an email to + # the module's author, the latter of which is a) more of an integration + # test, b) impossible to verify, and c) won't work from a sandbox. Replace + # it in its entirety with the following simple smoke test. + checkPhase = '' + perl -I blib/lib -MMail::Sendmail -e 'print "1..1\nok 1\n"' + ''; + meta = { + maintainers = [ maintainers.limeytexan ]; + description = "Simple platform independent mailer"; + license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ]; + }; + }; + MailSPF = buildPerlPackage rec { name = "Mail-SPF-v2.9.0"; #src = /root/nixops/Mail-SPF-v2.9.0; @@ -11033,7 +11056,7 @@ let self = _self // overrides; _self = with self; { # tests fail; look unfinished doCheck = false; meta = { - homepage = "http://ludovic.rousseau.free.fr/softwares/pcsc-perl/"; + homepage = http://ludovic.rousseau.free.fr/softwares/pcsc-perl/; description = "Communicate with a smart card using PC/SC"; license = stdenv.lib.licenses.gpl2Plus; maintainers = with maintainers; [ abbradar ]; @@ -11352,6 +11375,21 @@ let self = _self // overrides; _self = with self; { }; }; + POETestLoops = buildPerlPackage rec { + name = "POE-Test-Loops-1.360"; + src = fetchurl { + url = "mirror://cpan/authors/id/R/RC/RCAPUTO/${name}.tar.gz"; + sha256 = "0yx4wsljfmdzsiv0ni98x6lw975cm82ahngbwqvzv60wx5pwkl5y"; + }; + buildInputs = [ ]; + propagatedBuildInputs = [ ]; + meta = { + maintainers = [ maintainers.limeytexan ]; + description = "Reusable tests for POE::Loop authors"; + license = stdenv.lib.licenses.artistic2; + }; + }; + PPI = buildPerlPackage rec { name = "PPI-1.236"; src = fetchurl { @@ -12286,6 +12324,10 @@ let self = _self // overrides; _self = with self; { url = mirror://cpan/authors/id/P/PE/PEVANS/Socket-2.020.tar.gz; sha256 = "9ad4174c45b4c31d5e0b8019ada1fc767093849e77f268f0d1831eeb891dfdd7"; }; + postPatch = '' + # requires network access + rm t/getnameinfo.t + ''; meta = { description = "Networking constants and support functions"; license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ]; @@ -14136,6 +14178,20 @@ let self = _self // overrides; _self = with self; { }; }; + TestPodNo404s = buildPerlPackage rec { + name = "Test-Pod-No404s-0.02"; + src = fetchurl { + url = "mirror://cpan/authors/id/A/AP/APOCAL/Test-Pod-No404s-0.02.tar.gz"; + sha256 = "0ycfghsyl9f31kxdppjwx2g5iajrqh3fyywz0x7d8ayndw2hdihi"; + }; + propagatedBuildInputs = [ LWPUserAgent ModuleBuildTiny URIFind TestPod ]; + meta = { + homepage = http://search.cpan.org/dist/Test-Pod-No404s/; + description = "Checks POD for any http 404 links"; + license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ]; + }; + }; + TestPortabilityFiles = buildPerlPackage { name = "Test-Portability-Files-0.06"; src = fetchurl { diff --git a/pkgs/top-level/php-packages.nix b/pkgs/top-level/php-packages.nix index 4f653cebebcb..39044b9ccacd 100644 --- a/pkgs/top-level/php-packages.nix +++ b/pkgs/top-level/php-packages.nix @@ -383,11 +383,11 @@ let php-cs-fixer = pkgs.stdenv.mkDerivation rec { name = "php-cs-fixer-${version}"; - version = "2.10.2"; + version = "2.10.3"; src = pkgs.fetchurl { url = "https://github.com/FriendsOfPHP/PHP-CS-Fixer/releases/download/v${version}/php-cs-fixer.phar"; - sha256 = "1h089zddza2n5cznq340ijvc34d1ffsja9ks0b67nax52w0197mi"; + sha256 = "0ir72sns8baz825dkvffr5rx1f261phhbc6d9v0ncc4xkhr5zjnh"; }; phases = [ "installPhase" ]; diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index ea41b782bdcb..32dbef223066 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -279,6 +279,8 @@ in { Pmw = callPackage ../development/python-modules/Pmw { }; + py_stringmatching = callPackage ../development/python-modules/py_stringmatching { }; + pyaes = callPackage ../development/python-modules/pyaes { }; pyamf = callPackage ../development/python-modules/pyamf { }; @@ -2050,58 +2052,7 @@ in { canmatrix = callPackage ../development/python-modules/canmatrix {}; - cairocffi = buildPythonPackage rec { - name = "cairocffi-0.7.2"; - - src = pkgs.fetchurl { - url = "mirror://pypi/c/cairocffi/${name}.tar.gz"; - sha256 = "e42b4256d27bd960cbf3b91a6c55d602defcdbc2a73f7317849c80279feeb975"; - }; - - LC_ALL = "en_US.UTF-8"; - - # checkPhase require at least one 'normal' font and one 'monospace', - # otherwise glyph tests fails - FONTCONFIG_FILE = pkgs.makeFontsConf { - fontDirectories = [ pkgs.freefont_ttf ]; - }; - - buildInputs = with self; [ pytest pkgs.glibcLocales ]; - propagatedBuildInputs = with self; [ pkgs.cairo cffi ]; - - checkPhase = '' - py.test $out/${python.sitePackages} - ''; - - # FIXME: make gdk_pixbuf dependency optional (as wel as xcfffi) - # Happens with 0.7.1 and 0.7.2 - # OSError: dlopen() failed to load a library: gdk_pixbuf-2.0 / gdk_pixbuf-2.0-0 - - patches = [ - # This patch from PR substituted upstream - (pkgs.fetchpatch { - url = "https://github.com/avnik/cairocffi/commit/2266882e263c5efc87350cf016d117b2ec6a1d59.patch"; - sha256 = "0gb570z3ivf1b0ixsk526n3h29m8c5rhjsiyam7rr3x80dp65cdl"; - }) - - ../development/python-modules/cairocffi/dlopen-paths.patch - ../development/python-modules/cairocffi/fix_test_scaled_font.patch - ]; - - postPatch = '' - # Hardcode cairo library path - substituteInPlace cairocffi/__init__.py --subst-var-by cairo ${pkgs.cairo.out} - substituteInPlace cairocffi/__init__.py --subst-var-by glib ${pkgs.glib.out} - substituteInPlace cairocffi/__init__.py --subst-var-by gdk_pixbuf ${pkgs.gdk_pixbuf.out} - ''; - - meta = { - homepage = https://github.com/SimonSapin/cairocffi; - license = "bsd"; - description = "cffi-based cairo bindings for Python"; - }; - }; - + cairocffi = callPackage ../development/python-modules/cairocffi {}; cairosvg = buildPythonPackage rec { version = "1.0.18"; @@ -2225,6 +2176,7 @@ in { postPatch = '' cd bindings/python + sed -i 's,"libmpi.so.12","${pkgs.openmpi}/lib/libmpi.so",g' cntk/train/distributed.py ''; postInstall = '' @@ -2233,6 +2185,12 @@ in { # It's not installed for some reason. cp cntk/cntk_py.py $out/${python.sitePackages}/cntk ''; + + # Actual tests are broken. + checkPhase = '' + cd $NIX_BUILD_TOP + ${python.interpreter} -c "import cntk" + ''; }; celery = callPackage ../development/python-modules/celery { pytest = self.pytest_32; }; @@ -2771,6 +2729,16 @@ in { curtsies = callPackage ../development/python-modules/curtsies { }; + jsonrpc-async = callPackage ../development/python-modules/jsonrpc-async { }; + + jsonrpc-base = callPackage ../development/python-modules/jsonrpc-base { }; + + jsonrpc-websocket = callPackage ../development/python-modules/jsonrpc-websocket { }; + + onkyo-eiscp = callPackage ../development/python-modules/onkyo-eiscp { }; + + pyunifi = callPackage ../development/python-modules/pyunifi { }; + tablib = buildPythonPackage rec { name = "tablib-${version}"; version = "0.12.1"; @@ -2788,6 +2756,7 @@ in { }; }; + wakeonlan = callPackage ../development/python-modules/wakeonlan { }; openant = buildPythonPackage rec { name = "openant-unstable-2017-02-11"; @@ -3922,6 +3891,8 @@ in { discogs_client = callPackage ../development/python-modules/discogs_client { }; + dmenu-python = callPackage ../development/python-modules/dmenu { }; + dnspython = callPackage ../development/python-modules/dnspython { }; dns = self.dnspython; # Alias for compatibility, 2017-12-10 @@ -4894,32 +4865,7 @@ in { }; }; - grip = buildPythonPackage rec { - version = "4.3.2"; - name = "grip-${version}"; - - src = pkgs.fetchFromGitHub { - owner = "joeyespo"; - repo = "grip"; - rev = "v${version}"; - sha256 = "05a169sfaj280k7gibbc1rznjn43l5m6l1gpl6a5cmp5r8827khs"; - }; - buildInputs = with self; [ pytest responses ]; - - propagatedBuildInputs = with self; [ docopt flask markdown path-and-address pygments requests ]; - - checkPhase = '' - export PATH="$PATH:$out/bin" - py.test -xm "not assumption" - ''; - - meta = with stdenv.lib; { - description = "Preview GitHub Markdown files like Readme locally before committing them"; - homepage = https://github.com/joeyespo/grip; - license = licenses.mit; - maintainers = with maintainers; [ koral ]; - }; - }; + grip = callPackage ../development/python-modules/grip { }; gst-python = callPackage ../development/python-modules/gst-python { gst-plugins-base = pkgs.gst_all_1.gst-plugins-base; @@ -6142,74 +6088,12 @@ in { }; }; - python-axolotl = buildPythonPackage rec { - name = "python-axolotl-${version}"; - version = "0.1.39"; + python-axolotl = callPackage ../development/python-modules/python-axolotl { }; - src = pkgs.fetchurl { - url = "mirror://pypi/p/python-axolotl/${name}.tar.gz"; - sha256 = "09bf5gfip9x2wr0ij43p39ac6z2iqzn7kgpi2jjbwpnhs0vwkycs"; - }; - - propagatedBuildInputs = with self; [ python-axolotl-curve25519 protobuf pycrypto ]; - # IV == 0 in tests is not supported by pycryptodome (our pycrypto drop-in) - doCheck = false; - - meta = { - homepage = "https://github.com/tgalal/python-axolotl"; - description = "Python port of libaxolotl-android"; - maintainers = with maintainers; [ abbradar ]; - license = licenses.gpl3; - platforms = platforms.all; - }; - }; - - python-axolotl-curve25519 = buildPythonPackage rec { - name = "python-axolotl-curve25519-${version}"; - version = "0.1"; - - src = pkgs.fetchurl { - url = "mirror://pypi/p/python-axolotl-curve25519/${name}.tar.gz"; - sha256 = "1h1rsdr7m8lvgxwrwng7qv0xxmyc9k0q7g9nbcr6ks2ipyjzcnf5"; - }; - - meta = { - homepage = "https://github.com/tgalal/python-axolotl-curve25519"; - description = "Curve25519 with ed25519 signatures"; - maintainers = with maintainers; [ abbradar ]; - license = licenses.gpl3; - platforms = platforms.all; - }; - }; + python-axolotl-curve25519 = callPackage ../development/python-modules/python-axolotl-curve25519 { }; pythonix = toPythonModule (callPackage ../development/python-modules/pythonix { }); - pypolicyd-spf = buildPythonPackage rec { - name = "pypolicyd-spf-${version}"; - majorVersion = "2.0"; - version = "${majorVersion}.1"; - disabled = !isPy3k; - - src = pkgs.fetchurl { - url = "https://launchpad.net/pypolicyd-spf/${majorVersion}/${version}/+download/${name}.tar.gz"; - sha256 = "09yi8y7pij5vzzrkc9sdw01x8w5n758d0qg7wv5hxd1l6if8c94i"; - }; - - propagatedBuildInputs = with self; [ pyspf ]; - - preBuild = '' - substituteInPlace setup.py --replace "'/etc'" "'$out/etc'" - ''; - - meta = { - homepage = "https://launchpad.net/pypolicyd-spf/"; - description = "Postfix policy engine for Sender Policy Framework (SPF) checking"; - maintainers = with maintainers; [ abbradar ]; - license = licenses.asl20; - platforms = platforms.all; - }; - }; - pyramid = buildPythonPackage rec { pname = "pyramid"; version = "1.9.1"; @@ -6356,25 +6240,7 @@ in { pyroute2 = callPackage ../development/python-modules/pyroute2 { }; - pyspf = buildPythonPackage rec { - name = "pyspf-${version}"; - version = "2.0.12"; - - src = pkgs.fetchurl { - url = "mirror://sourceforge/pymilter/pyspf/${name}/${name}.tar.gz"; - sha256 = "18j1rmbmhih7q6y12grcj169q7sx1986qn4gmpla9y5gwfh1p8la"; - }; - - propagatedBuildInputs = with self; [ pydns ]; - - meta = { - homepage = "http://bmsi.com/python/milter.html"; - description = "Python API for Sendmail Milters (SPF)"; - maintainers = with maintainers; [ abbradar ]; - license = licenses.gpl2; - platforms = platforms.all; - }; - }; + pyspf = callPackage ../development/python-modules/pyspf { }; pysrt = callPackage ../development/python-modules/pysrt { }; @@ -6510,23 +6376,7 @@ in { doCheck = false; }; - sarge = buildPythonPackage rec { - name = "sarge-${version}"; - version = "0.1.4"; - - src = pkgs.fetchurl { - url = "mirror://pypi/s/sarge/${name}.tar.gz"; - sha256 = "08s8896973bz1gg0pkr592w6g4p6v47bkfvws5i91p9xf8b35yar"; - }; - - meta = { - homepage = "http://sarge.readthedocs.org/"; - description = "A wrapper for subprocess which provides command pipeline functionality"; - license = licenses.bsd3; - platforms = platforms.all; - maintainers = with maintainers; [ abbradar ]; - }; - }; + sarge = callPackage ../development/python-modules/sarge { }; subliminal = callPackage ../development/python-modules/subliminal {}; @@ -6634,53 +6484,7 @@ in { }; }; - scandir = self.buildPythonPackage rec { - name = "scandir-${version}"; - version = "1.4"; - - src = pkgs.fetchurl { - url = "mirror://pypi/s/scandir/${name}.tar.gz"; - sha256 = "0yjrgp0mxp3d8bjkq2m1ac2ys8n76wykksvgyjrnil9gr3fx7a5d"; - }; - - meta = with stdenv.lib; { - description = "A better directory iterator and faster os.walk()"; - homepage = "https://github.com/benhoyt/scandir"; - license = licenses.gpl3; - maintainers = with maintainers; [ abbradar ]; - }; - }; - - scfbuild = self.buildPythonPackage rec { - name = "scfbuild-${version}"; - version = "1.0.3"; - - disabled = isPy3k; - - src = pkgs.fetchFromGitHub { - owner = "eosrei"; - repo = "scfbuild"; - rev = "c179c8d279b7cc0a9a3536a713ac880ac6010318"; - sha256 = "1bsi7k4kkj914pycp1g92050hjxscyvc9qflqb3cv5yz3c93cs46"; - }; - - phases = [ "unpackPhase" "installPhase" "fixupPhase" ]; - - propagatedBuildInputs = with self; [ pyyaml fonttools fontforge ]; - - installPhase = '' - mkdir -p $out/${python.sitePackages} - cp -r scfbuild $out/${python.sitePackages} - cp -r bin $out - ''; - - meta = with stdenv.lib; { - description = "SVGinOT color font builder"; - homepage = "https://github.com/eosrei/scfbuild"; - license = licenses.gpl3; - maintainers = with maintainers; [ abbradar ]; - }; - }; + scandir = callPackage ../development/python-modules/scandir { }; schedule = buildPythonPackage rec { name = "schedule-0.3.2"; @@ -7525,25 +7329,7 @@ in { }; }; - enum-compat = buildPythonPackage rec { - pname = "enum-compat"; - version = "0.0.2"; - name = "${pname}-${version}"; - - src = fetchPypi { - inherit pname version; - sha256 = "14j1i963jic2vncbf9k5nq1vvv8pw2zsg7yvwhm7d9c6h7qyz74k"; - }; - - propagatedBuildInputs = with self; [ enum34 ]; - - meta = { - homepage = "https://github.com/jstasiak/enum-compat"; - description = "enum/enum34 compatibility package"; - license = licenses.mit; - maintainers = with maintainers; [ abbradar ]; - }; - }; + enum-compat = callPackage ../development/python-modules/enum-compat { }; enum34 = if pythonAtLeast "3.4" then null else buildPythonPackage rec { pname = "enum34"; @@ -7812,24 +7598,7 @@ in { flask = callPackage ../development/python-modules/flask { }; - flask_assets = buildPythonPackage rec { - name = "Flask-Assets-${version}"; - version = "0.12"; - - src = pkgs.fetchurl { - url = "mirror://pypi/F/Flask-Assets/${name}.tar.gz"; - sha256 = "0ivqsihk994rxw58vdgzrx4d77d7lpzjm4qxb38hjdgvi5xm4cb0"; - }; - - propagatedBuildInputs = with self; [ flask webassets flask_script nose ]; - - meta = { - homepage = "http://github.com/miracle2k/flask-assets"; - description = "Asset management for Flask, to compress and merge CSS and Javascript files"; - license = licenses.bsd2; - maintainers = with maintainers; [ abbradar ]; - }; - }; + flask_assets = callPackage ../development/python-modules/flask-assets { }; flask_cache = buildPythonPackage rec { name = "Flask-Cache-0.13.1"; @@ -7870,25 +7639,7 @@ in { flask_oauthlib = callPackage ../development/python-modules/flask-oauthlib { }; - flask_principal = buildPythonPackage rec { - name = "Flask-Principal-${version}"; - version = "0.4.0"; - - src = pkgs.fetchurl { - url = "mirror://pypi/F/Flask-Principal/${name}.tar.gz"; - sha256 = "0lwlr5smz8vfm5h9a9i7da3q1c24xqc6vm9jdywdpgxfbi5i7mpm"; - }; - - propagatedBuildInputs = with self; [ flask blinker nose ]; - - meta = { - homepage = "http://packages.python.org/Flask-Principal/"; - description = "Identity management for flask"; - license = licenses.bsd2; - platforms = platforms.all; - maintainers = with maintainers; [ abbradar ]; - }; - }; + flask_principal = callPackage ../development/python-modules/flask-principal { }; flask-pymongo = callPackage ../development/python-modules/Flask-PyMongo { }; @@ -7896,26 +7647,7 @@ in { flask-restplus = callPackage ../development/python-modules/flask-restplus { }; - flask_script = buildPythonPackage rec { - name = "Flask-Script-${version}"; - version = "2.0.5"; - - src = pkgs.fetchurl { - url = "mirror://pypi/F/Flask-Script/${name}.tar.gz"; - sha256 = "0zqh2yq8zk7m9b4xw1ryqmrljkdigfb3hk5155a3b5hkfnn6xxyf"; - }; - - nativeBuildInputs = with self; [ pytest ]; - propagatedBuildInputs = with self; [ flask ]; - - meta = { - homepage = "http://github.com/smurfix/flask-script"; - description = "Scripting support for Flask"; - license = licenses.bsd3; - platforms = platforms.all; - maintainers = with maintainers; [ abbradar ]; - }; - }; + flask_script = callPackage ../development/python-modules/flask-script { }; flask_sqlalchemy = buildPythonPackage rec { name = "Flask-SQLAlchemy-${version}"; @@ -9326,6 +9058,8 @@ in { jupyterhub = callPackage ../development/python-modules/jupyterhub { }; + jupyterhub-ldapauthenticator = callPackage ../development/python-modules/jupyterhub-ldapauthenticator { }; + jsonpath_rw = buildPythonPackage rec { name = "jsonpath-rw-${version}"; version = "1.4.0"; @@ -9483,25 +9217,11 @@ in { kitchen = callPackage ../development/python-modules/kitchen/default.nix { }; + kubernetes = callPackage ../development/python-modules/kubernetes/default.nix { }; + pylast = callPackage ../development/python-modules/pylast/default.nix { }; - pylru = buildPythonPackage rec { - name = "pylru-${version}"; - version = "1.0.9"; - - src = pkgs.fetchurl { - url = "mirror://pypi/p/pylru/${name}.tar.gz"; - sha256 = "0b0pq0l7xv83dfsajsc49jcxzc99kb9jfx1a1dlx22hzcy962dvi"; - }; - - meta = { - homepage = "https://github.com/jlhutch/pylru"; - description = "A least recently used (LRU) cache implementation"; - license = licenses.gpl2; - platforms = platforms.all; - maintainers = with maintainers; [ abbradar ]; - }; - }; + pylru = callPackage ../development/python-modules/pylru/default.nix { }; lark-parser = callPackage ../development/python-modules/lark-parser { }; @@ -10869,6 +10589,7 @@ in { }; }; + mysql-connector = callPackage ../development/python-modules/mysql-connector { }; mysql_connector_repackaged = buildPythonPackage rec { name = "mysql-connector-repackaged-0.3.1"; @@ -11288,7 +11009,7 @@ in { ''; nativeBuildInputs = [ pkgs.pkgconfig ]; - buildInputs = with self; [ python pkgs.libnotify pygobject2 pygtk pkgs.glib pkgs.gtk2 pkgs.dbus_glib ]; + buildInputs = with self; [ python pkgs.libnotify pygobject2 pygtk pkgs.glib pkgs.gtk2 pkgs.dbus-glib ]; postInstall = "cd $out/lib/python*/site-packages && ln -s gtk-*/pynotify ."; @@ -11411,25 +11132,7 @@ in { blas = pkgs.openblasCompat; }; - numpydoc = buildPythonPackage rec { - pname = "numpydoc"; - name = "${pname}-${version}"; - version = "0.6.0"; - - src = pkgs.fetchurl { - url = "mirror://pypi/${builtins.substring 0 1 pname}/${pname}/${name}.tar.gz"; - sha256 = "1ec573e91f6d868a9940d90a6599f3e834a2d6c064030fbe078d922ee21dcfa1"; - }; - - buildInputs = [ self.nose ]; - propagatedBuildInputs = [ self.sphinx self.matplotlib ]; - - meta = { - description = "Sphinx extension to support docstrings in Numpy format"; - homepage = "https://github.com/numpy/numpydoc"; - license = licenses.free; - }; - }; + numpydoc = callPackage ../development/python-modules/numpydoc { }; numpy-stl = callPackage ../development/python-modules/numpy-stl { }; @@ -11810,29 +11513,7 @@ in { cachetools_1 = callPackage ../development/python-modules/cachetools/1.nix {}; cachetools = callPackage ../development/python-modules/cachetools {}; - cmd2 = buildPythonPackage rec { - name = "cmd2-${version}"; - version = "0.7.7"; - - src = pkgs.fetchurl { - url = "mirror://pypi/c/cmd2/${name}.tar.gz"; - sha256 = "0widbir8ay1fd4zm8l0rjq78j1cvbammbz8xs32crbanqsgzpqml"; - }; - - # No tests included - doCheck = false; - - propagatedBuildInputs = with self; [ - pyperclip - six - pyparsing - ]; - - meta = with stdenv.lib; { - description = "Enhancements for standard library's cmd module"; - homepage = "http://packages.python.org/cmd2/"; - }; - }; + cmd2 = callPackage ../development/python-modules/cmd2 {}; warlock = buildPythonPackage rec { name = "warlock-${version}"; @@ -15904,29 +15585,7 @@ in { }; }; - spake2 = buildPythonPackage rec { - name = "spake2-${version}"; - version = "0.7"; - - src = pkgs.fetchurl { - url = "mirror://pypi/s/spake2/${name}.tar.gz"; - sha256 = "0rmplicbbid41qrvwc1ckyp211ban01ardms5yqqq16ixrc18a6j"; - }; - - buildInputs = with self; [ pytest ]; - - propagatedBuildInputs = with self; [ hkdf ]; - - checkPhase = '' - py.test $out - ''; - - meta = { - description = "SPAKE2 password-authenticated key exchange library"; - homepage = "http://github.com/warner/python-spake2"; - license = licenses.mit; - }; - }; + spake2 = callPackage ../development/python-modules/spake2 { }; sphfile = callPackage ../development/python-modules/sphfile { }; @@ -16487,24 +16146,7 @@ in { }; }; - sockjs-tornado = buildPythonPackage rec { - name = "sockjs-tornado-${version}"; - version = "1.0.3"; - - src = pkgs.fetchurl { - url = "mirror://pypi/s/sockjs-tornado/${name}.tar.gz"; - sha256 = "16cff40nniqsyvda1pb2j3b4zwmrw7y2g1vqq78lp20xpmhnwwkd"; - }; - - propagatedBuildInputs = with self; [ tornado ]; - - meta = { - homepage = "http://github.com/mrjoes/sockjs-tornado/"; - description = "SockJS python server implementation on top of Tornado framework"; - license = licenses.mit; - maintainers = with maintainers; [ abbradar ]; - }; - }; + sockjs-tornado = callPackage ../development/python-modules/sockjs-tornado { }; sorl_thumbnail = buildPythonPackage rec { name = "sorl-thumbnail-11.12"; @@ -17840,31 +17482,7 @@ in { }; }; - virtkey = buildPythonPackage rec { - name = "virtkey-${version}"; - majorVersion = "0.63"; - version = "${majorVersion}.0"; - - src = pkgs.fetchurl { - url = "https://launchpad.net/virtkey/${majorVersion}/${version}/+download/virtkey-${version}.tar.gz"; - sha256 = "0hd99hrxn6bh3rxcrdnad5cqjsphrn1s6fzx91q07d44k6cg6qcr"; - }; - - nativeBuildInputs = [ pkgs.pkgconfig ]; - - buildInputs = - [ pkgs.gtk2 ] - ++ (with pkgs.xorg; [ libX11 libXtst libXi libxkbfile xextproto xproto ]); - - meta = { - description = "Extension to emulate keypresses and to get the layout information from the X server"; - homepage = "https://launchpad.net/virtkey"; - license = licenses.gpl3; - maintainers = with maintainers; [ abbradar ]; - }; - }; - - + virtkey = callPackage ../development/python-modules/virtkey { }; virtual-display = buildPythonPackage rec { name = "PyVirtualDisplay-0.1.5"; @@ -18039,32 +17657,7 @@ EOF waitress-django = callPackage ../development/python-modules/waitress-django { }; - webassets = buildPythonPackage rec { - name = "webassets-${version}"; - version = "0.12.1"; - - src = pkgs.fetchurl { - url = "mirror://pypi/w/webassets/${name}.tar.gz"; - sha256 = "1nrqkpb7z46h2b77xafxihqv3322cwqv6293ngaky4j3ff4cing7"; - }; - - buildInputs = with self; [ nose jinja2 mock pytest ]; - propagatedBuildInputs = with self; [ pyyaml ]; - - doCheck = false; - - checkPhase = '' - py.test - ''; - - meta = { - description = "Media asset management for Python, with glue code for various web frameworks"; - homepage = "http://github.com/miracle2k/webassets/"; - license = licenses.bsd2; - platforms = platforms.all; - maintainers = with maintainers; [ abbradar ]; - }; - }; + webassets = callPackage ../development/python-modules/webassets { }; webcolors = callPackage ../development/python-modules/webcolors { }; @@ -18207,6 +17800,8 @@ EOF magic-wormhole = callPackage ../development/python-modules/magic-wormhole { }; + magic-wormhole-transit-relay = callPackage ../development/python-modules/magic-wormhole-transit-relay { }; + wsgiproxy2 = buildPythonPackage rec { name = "WSGIProxy2-0.4.2"; @@ -18783,38 +18378,6 @@ EOF }; }; - screenkey = buildPythonPackage rec { - version = "0.2-b3634a2c6eb6d6936c3b2c1ef5078bf3a84c40c6"; - name = "screenkey-${version}"; - - propagatedBuildInputs = with self; [ pygtk distutils_extra xlib pkgs.xorg.xmodmap ]; - - preConfigure = '' - substituteInPlace setup.py --replace "/usr/share" "./share" - - # disable the feature that binds a shortcut to turning on/off - # screenkey. This is because keybinder is not packages in Nix as - # of today. - substituteInPlace Screenkey/screenkey.py \ - --replace "import keybinder" "" \ - --replace " keybinder.bind(self.options['hotkey'], self.hotkey_cb, show_item)" "" - ''; - - src = pkgs.fetchgit { - url = https://github.com/scs3jb/screenkey.git; - rev = "b3634a2c6eb6d6936c3b2c1ef5078bf3a84c40c6"; - sha256 = "1535mpm5x6v85d4ghxhdiianhjrsz280dwvs61ss0yyjx4kivx3s"; - }; - - meta = { - homepage = https://github.com/scs3jb/screenkey; - description = "A screencast tool to show your keys"; - license = licenses.gpl3Plus; - maintainers = with maintainers; [ ]; - platforms = platforms.linux; - }; - }; - tarman = buildPythonPackage rec { version = "0.1.3"; name = "tarman-${version}"; @@ -19017,22 +18580,7 @@ EOF }; - websocket_client = buildPythonPackage rec { - name = "websocket_client-0.40.0"; - - src = pkgs.fetchurl { - url = "mirror://pypi/w/websocket-client/${name}.tar.gz"; - sha256 = "1yz67wdjijrvwpx0a0f6wdfy8ajsvr9xbj5514ld452fqnh19b20"; - }; - - propagatedBuildInputs = with self; [ six backports_ssl_match_hostname unittest2 argparse ]; - - meta = { - homepage = https://github.com/liris/websocket-client; - description = "Websocket client for python"; - license = licenses.lgpl2; - }; - }; + websocket_client = callPackage ../development/python-modules/websockets_client { }; webhelpers = buildPythonPackage rec { @@ -20692,23 +20240,7 @@ EOF }; }; - d2to1 = buildPythonPackage rec { - name = "d2to1-${version}"; - version = "0.2.11"; - - buildInputs = with self; [ nose ]; - src = pkgs.fetchurl { - url = "mirror://pypi/d/d2to1/d2to1-${version}.tar.gz"; - sha256 = "1a5z367b7dpd6dgi0w8pymb68aj2pblk8w04l2c8hibhj8dpl2b4"; - }; - - meta = { - description = "Support for distutils2-like setup.cfg files as package metadata"; - homepage = https://pypi.python.org/pypi/d2to1; - license = licenses.bsd2; - maintainers = [ maintainers.makefu ]; - }; - }; + d2to1 = callPackage ../development/python-modules/d2to1 { }; ovh = callPackage ../development/python-modules/ovh { }; @@ -20800,21 +20332,6 @@ EOF }; }; - xstatic = buildPythonPackage rec { - name = "XStatic-${version}"; - version = "1.0.1"; - src = pkgs.fetchurl { - url = "mirror://pypi/X/XStatic/XStatic-${version}.tar.gz"; - sha256 = "09npcsyf1ccygjs0qc8kdsv4qqy8gm1m6iv63g9y1fgbcry3vj8f"; - }; - meta = { - homepage = https://bitbucket.org/thomaswaldmann/xstatic; - description = "Base packaged static files for python"; - license = licenses.mit; - maintainers = [ maintainers.makefu ]; - }; - }; - xlsx2csv = buildPythonPackage rec { name = "xlsx2csv-${version}"; version = "0.7.2"; @@ -20832,103 +20349,19 @@ EOF xmpppy = callPackage ../development/python-modules/xmpppy {}; - xstatic-bootbox = buildPythonPackage rec { - name = "XStatic-Bootbox-${version}"; - version = "4.3.0.1"; - src = pkgs.fetchurl { - url = "mirror://pypi/X/XStatic-Bootbox/XStatic-Bootbox-${version}.tar.gz"; - sha256 = "0wks1lsqngn3gvlhzrvaan1zj8w4wr58xi0pfqhrzckbghvvr0gj"; - }; + xstatic = callPackage ../development/python-modules/xstatic {}; - meta = { - homepage = http://bootboxjs.com; - description = "bootboxjs packaged static files for python"; - license = licenses.mit; - maintainers = [ maintainers.makefu ]; - }; - }; + xstatic-bootbox = callPackage ../development/python-modules/xstatic-bootbox {}; - xstatic-bootstrap = buildPythonPackage rec { - name = "XStatic-Bootstrap-${version}"; - version = "3.3.5.1"; - src = pkgs.fetchurl { - url = "mirror://pypi/X/XStatic-Bootstrap/XStatic-Bootstrap-${version}.tar.gz"; - sha256 = "0jzjq3d4vp2shd2n20f9y53jnnk1cvphkj1v0awgrf18qsy2bmin"; - }; + xstatic-bootstrap = callPackage ../development/python-modules/xstatic-bootstrap {}; - meta = { - homepage = http://getbootstrap.com; - description = "bootstrap packaged static files for python"; - license = licenses.mit; - maintainers = [ maintainers.makefu ]; - }; - }; + xstatic-jquery = callPackage ../development/python-modules/xstatic-jquery {}; - xstatic-jquery = buildPythonPackage rec { - name = "XStatic-jQuery-${version}"; - version = "1.10.2.1"; - src = pkgs.fetchurl { - url = "mirror://pypi/X/XStatic-jQuery/XStatic-jQuery-${version}.tar.gz"; - sha256 = "018kx4zijflcq8081xx6kmiqf748bsjdq7adij2k91bfp1mnlhc3"; - }; + xstatic-jquery-file-upload = callPackage ../development/python-modules/xstatic-jquery-file-upload {}; - meta = { - homepage = http://jquery.org; - description = "jquery packaged static files for python"; - license = licenses.mit; - maintainers = [ maintainers.makefu ]; - }; - }; + xstatic-jquery-ui = callPackage ../development/python-modules/xstatic-jquery-ui {}; - xstatic-jquery-file-upload = buildPythonPackage rec { - name = "XStatic-jQuery-File-Upload-${version}"; - version = "9.7.0.1"; - propagatedBuildInputs = with self;[ xstatic-jquery ]; - src = pkgs.fetchurl { - url = "mirror://pypi/X/XStatic-jQuery-File-Upload/XStatic-jQuery-File-Upload-${version}.tar.gz"; - sha256 = "0d5za18lhzhb54baxq8z73wazq801n3qfj5vgcz7ri3ngx7nb0cg"; - }; - - meta = { - homepage = http://plugins.jquery.com/project/jQuery-File-Upload; - description = "jquery-file-upload packaged static files for python"; - license = licenses.mit; - maintainers = [ maintainers.makefu ]; - }; - }; - - xstatic-jquery-ui = buildPythonPackage rec { - name = "XStatic-jquery-ui-${version}"; - version = "1.12.0.1"; - propagatedBuildInputs = with self; [ xstatic-jquery ]; - src = pkgs.fetchurl { - url = "mirror://pypi/X/XStatic-jquery-ui/XStatic-jquery-ui-${version}.tar.gz"; - sha256 = "0w7mabv6qflpd47g33j3ggp5rv17mqk0xz3bsdswcj97wqpga2l2"; - }; - - meta = { - homepage = http://jqueryui.com/; - description = "jquery-ui packaged static files for python"; - license = licenses.mit; - maintainers = [ maintainers.makefu ]; - }; - }; - - xstatic-pygments = buildPythonPackage rec { - name = "XStatic-Pygments-${version}"; - version = "1.6.0.1"; - src = pkgs.fetchurl { - url = "mirror://pypi/X/XStatic-Pygments/XStatic-Pygments-${version}.tar.gz"; - sha256 = "0fjqgg433wfdnswn7fad1g6k2x6mf24wfnay2j82j0fwgkdxrr7m"; - }; - - meta = { - homepage = http://pygments.org; - description = "pygments packaged static files for python"; - license = licenses.bsd2; - maintainers = [ maintainers.makefu ]; - }; - }; + xstatic-pygments = callPackage ../development/python-modules/xstatic-pygments {}; xvfbwrapper = callPackage ../development/python-modules/xvfbwrapper { inherit (pkgs.xorg) xorgserver; diff --git a/pkgs/top-level/release-cross.nix b/pkgs/top-level/release-cross.nix index 61cf865371df..ef99dbd619e4 100644 --- a/pkgs/top-level/release-cross.nix +++ b/pkgs/top-level/release-cross.nix @@ -16,6 +16,8 @@ let buildPackages.binutils = nativePlatforms; gmp = nativePlatforms; libcCross = nativePlatforms; + nix = nativePlatforms; + nixUnstable = nativePlatforms; }; gnuCommon = lib.recursiveUpdate common { @@ -50,6 +52,15 @@ let buildPackages.binutils = darwin; }; + rpiCommon = linuxCommon // { + vim = nativePlatforms; + unzip = nativePlatforms; + ddrescue = nativePlatforms; + lynx = nativePlatforms; + patchelf = nativePlatforms; + buildPackages.binutils = nativePlatforms; + mpg123 = nativePlatforms; + }; in { @@ -82,6 +93,7 @@ in mapTestEqual = lib.mapAttrsRecursive testEqual; in mapTestEqual { + androidndk = nativePlatforms; boehmgc = nativePlatforms; libffi = nativePlatforms; libiconv = nativePlatforms; @@ -111,29 +123,15 @@ in fuloongminipc = mapTestOnCross lib.systems.examples.fuloongminipc linuxCommon; /* Linux on Raspberrypi */ - rpi = mapTestOnCross lib.systems.examples.raspberryPi (linuxCommon // { - vim = nativePlatforms; - unzip = nativePlatforms; - ddrescue = nativePlatforms; - lynx = nativePlatforms; - patchelf = nativePlatforms; - buildPackages.binutils = nativePlatforms; - mpg123 = nativePlatforms; - }); + rpi = mapTestOnCross lib.systems.examples.raspberryPi rpiCommon; + rpi-musl = mapTestOnCross lib.systems.examples.muslpi rpiCommon; - /* Linux on Aarch64 (TODO make android for real) */ - android = mapTestOnCross lib.systems.examples.aarch64-multiplatform (linuxCommon // { - }); + aarch64-musl = mapTestOnCross lib.systems.examples.aarch64-multiplatform-musl linuxCommon; x86_64-musl = mapTestOnCross lib.systems.examples.musl64 linuxCommon; - rpi-musl = mapTestOnCross lib.systems.examples.muslpi (linuxCommon // { - vim = nativePlatforms; - unzip = nativePlatforms; - ddrescue = nativePlatforms; - lynx = nativePlatforms; - patchelf = nativePlatforms; - buildPackages.binutils = nativePlatforms; - mpg123 = nativePlatforms; + + /* Linux on Aarch64 */ + android64 = mapTestOnCross lib.systems.examples.aarch64-android-prebuilt (linuxCommon // { }); /* Cross-built bootstrap tools for every supported platform */