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python3Packages.nilearn: 0.6.2 -> 0.7.0

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This commit is contained in:
Ben Darwin 2020-11-17 16:37:22 -05:00
parent c1dfbaa8ad
commit a319fd5d66
1 changed files with 9 additions and 17 deletions
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26
pkgs/development/python-modules/nilearn/default.nix
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@ -1,26 +1,17 @@
{ stdenv, buildPythonPackage, fetchPypi, pytest, nose
, nibabel, numpy, pandas, scikitlearn, scipy, matplotlib, joblib }:
{ lib, buildPythonPackage, fetchPypi, pytestCheckHook, matplotlib
, nibabel, numpy, pandas, scikitlearn, scipy, joblib, requests }:
buildPythonPackage rec {
pname = "nilearn";
version = "0.6.2";
version = "0.7.0";
src = fetchPypi {
inherit pname version;
sha256 = "cfc6cfda59a6f4247189f8ccf92e364de450460a15c0ec21bdb857c420dd198c";
sha256 = "1rhpy6na7hkhc211ri14zghvmb2fxkh995wi09pkc68klf1dzjg7";
};
postPatch = ''
substituteInPlace setup.py --replace "required_packages.append('sklearn')" ""
'';
# https://github.com/nilearn/nilearn/issues/2288
# disable some failing tests
checkPhase = ''
pytest nilearn/tests -k 'not test_cache_mixin_with_expand_user' # accesses ~/
'';
checkInputs = [ pytest nose ];
checkInputs = [ pytestCheckHook ];
disabledTests = [ "test_clean_confounds" ]; # https://github.com/nilearn/nilearn/issues/2608
propagatedBuildInputs = [
joblib
@ -28,12 +19,13 @@ buildPythonPackage rec {
nibabel
numpy
pandas
requests
scikitlearn
scipy
];
meta = with stdenv.lib; {
homepage = "http://nilearn.github.io";
meta = with lib; {
homepage = "https://nilearn.github.io";
description = "A module for statistical learning on neuroimaging data";
license = licenses.bsd3;
};