Resurrect pandas 0.17.1

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Shea Levy 2017-10-06 13:55:44 -07:00
parent 75bd873547
commit 96874c6e71
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2 changed files with 111 additions and 0 deletions

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@ -0,0 +1,56 @@
{lib, fetchurl, python, buildPythonPackage, isPyPy, gfortran, nose, numpy}:
buildPythonPackage rec {
pname = "scipy";
version = "0.17.1";
name = "${pname}-${version}";
src = fetchurl {
url = "mirror://pypi/s/scipy/scipy-${version}.tar.gz";
sha256 = "1b1qpfz2j2rvmlplsjbnznnxnqr9ckbmis506110ii1w07wd4k4w";
};
buildInputs = [ gfortran nose numpy.blas ];
propagatedBuildInputs = [ numpy ];
# Remove tests because of broken wrapper
prePatch = ''
rm scipy/linalg/tests/test_lapack.py
'';
preConfigure = ''
sed -i '0,/from numpy.distutils.core/s//import setuptools;from numpy.distutils.core/' setup.py
export NPY_NUM_BUILD_JOBS=$NIX_BUILD_CORES
'';
preBuild = ''
echo "Creating site.cfg file..."
cat << EOF > site.cfg
[openblas]
include_dirs = ${numpy.blas}/include
library_dirs = ${numpy.blas}/lib
EOF
'';
enableParallelBuilding = true;
checkPhase = ''
runHook preCheck
pushd dist
${python.interpreter} -c 'import scipy; scipy.test("fast", verbose=10)'
popd
runHook postCheck
'';
passthru = {
blas = numpy.blas;
};
setupPyBuildFlags = [ "--fcompiler='gnu95'" ];
meta = {
description = "SciPy (pronounced 'Sigh Pie') is open-source software for mathematics, science, and engineering. ";
homepage = http://www.scipy.org/;
maintainers = with lib.maintainers; [ fridh ];
};
}

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@ -14990,6 +14990,59 @@ in {
pandas = callPackage ../development/python-modules/pandas { };
pandas_17 = let
inherit (pkgs.stdenv.lib) optional optionalString;
inherit (pkgs.stdenv) isDarwin;
in buildPythonPackage rec {
name = "pandas-${version}";
version = "0.17.1";
src = pkgs.fetchurl {
url = "https://pypi.python.org/packages/source/p/pandas/${name}.tar.gz";
sha256 = "cfd7214a7223703fe6999fbe34837749540efee1c985e6aee9933f30e3f72837";
};
buildInputs = with self; [ nose ] ++ optional isDarwin pkgs.libcxx;
propagatedBuildInputs = with self; [
dateutil
scipy_0_17
numexpr
pytz
xlrd
bottleneck
sqlalchemy
lxml
html5lib
# modules.sqlite3
beautifulsoup4
] ++ optional isDarwin pkgs.darwin.locale; # provides the locale command
# For OSX, we need to add a dependency on libcxx, which provides
# `complex.h` and other libraries that pandas depends on to build.
patchPhase = optionalString isDarwin ''
cpp_sdk="${pkgs.libcxx}/include/c++/v1";
echo "Adding $cpp_sdk to the setup.py common_include variable"
substituteInPlace setup.py \
--replace "['pandas/src/klib', 'pandas/src']" \
"['pandas/src/klib', 'pandas/src', '$cpp_sdk']"
# disable clipboard tests since pbcopy/pbpaste are not open source
substituteInPlace pandas/io/tests/test_clipboard.py \
--replace pandas.util.clipboard no_such_module \
--replace OSError ImportError
'';
doCheck = false;
meta = {
homepage = "http://pandas.pydata.org/";
description = "Python Data Analysis Library";
license = licenses.bsd3;
maintainers = with maintainers; [ raskin fridh ];
platforms = platforms.unix;
};
};
xlrd = buildPythonPackage rec {
name = "xlrd-${version}";
@ -19348,6 +19401,8 @@ in {
scipy = callPackage ../development/python-modules/scipy { };
scipy_0_17 = callPackage ../development/python-modules/scipy/0.17.1.nix { };
scikitimage = buildPythonPackage rec {
name = "scikit-image-${version}";
version = "0.12.3";