Merge remote-tracking branch 'upstream/master' into HEAD

.travis.yml

@@ -26,6 +26,4 @@ env:
         - GITHUB_TOKEN=5edaaf1017f691ed34e7f80878f8f5fbd071603f
 
 notifications:
-    email:
-        on_success: never
-        on_failure: change
+    email: false

lib/maintainers.nix

@@ -178,6 +178,7 @@
   exlevan = "Alexey Levan <exlevan@gmail.com>";
   expipiplus1 = "Joe Hermaszewski <nix@monoid.al>";
   fadenb = "Tristan Helmich <tristan.helmich+nixos@gmail.com>";
+  fare = "Francois-Rene Rideau <fahree@gmail.com>";
   falsifian = "James Cook <james.cook@utoronto.ca>";
   flosse = "Markus Kohlhase <mail@markus-kohlhase.de>";
   fluffynukeit = "Daniel Austin <dan@fluffynukeit.com>";

lib/meta.nix

@@ -17,6 +17,11 @@ rec {
     drv // { meta = (drv.meta or {}) // newAttrs; };
 
 
+  /* Disable Hydra builds of given derivation.
+  */
+  dontDistribute = drv: addMetaAttrs { hydraPlatforms = []; } drv;
+
+
   /* Change the symbolic name of a package for presentation purposes
      (i.e., so that nix-env users can tell them apart).
   */

nixos/doc/manual/development/building-nixos.xml

@@ -12,12 +12,12 @@ your <filename>configuration.nix</filename> to configure the system that
 would be installed on the CD.</para>
 
 <para>Default CD/DVD configurations are available
-inside <filename>nixos/modules/installer/cd-dvd</filename>.  To build them
-you have to set <envar>NIXOS_CONFIG</envar> before
-running <command>nix-build</command> to build the ISO.
+inside <filename>nixos/modules/installer/cd-dvd</filename>.
 
 <screen>
-$ nix-build -A config.system.build.isoImage -I nixos-config=modules/installer/cd-dvd/installation-cd-minimal.nix</screen>
+$ git clone https://github.com/NixOS/nixpkgs.git
+$ cd nixpkgs/nixos
+$ nix-build -A config.system.build.isoImage -I nixos-config=modules/installer/cd-dvd/installation-cd-minimal.nix default.nix</screen>
 
 </para>
 

nixos/modules/misc/ids.nix

@@ -294,6 +294,7 @@
       jackett = 276;
       aria2 = 277;
       clickhouse = 278;
+      rslsync = 279;
 
       # When adding a uid, make sure it doesn't match an existing gid. And don't use uids above 399!
 
@@ -557,6 +558,7 @@
       jackett = 276;
       aria2 = 277;
       clickhouse = 278;
+      rslsync = 279;
 
       # When adding a gid, make sure it doesn't match an existing
       # uid. Users and groups with the same name should have equal

nixos/modules/module-list.nix

@@ -485,6 +485,7 @@
   ./services/networking/radvd.nix
   ./services/networking/rdnssd.nix
   ./services/networking/redsocks.nix
+  ./services/networking/resilio.nix
   ./services/networking/rpcbind.nix
   ./services/networking/sabnzbd.nix
   ./services/networking/searx.nix

nixos/modules/programs/zsh/zsh-syntax-highlighting.nix

@@ -8,13 +8,7 @@ in
   {
     options = {
       programs.zsh.syntaxHighlighting = {
-        enable = mkOption {
-          default = false;
-          type = types.bool;
-          description = ''
-            Enable zsh-syntax-highlighting.
-          '';
-        };
+        enable = mkEnableOption "zsh-syntax-highlighting";
 
         highlighters = mkOption {
           default = [ "main" ];
@@ -38,13 +32,13 @@ in
         };
 
         patterns = mkOption {
-          default = [];
-          type = types.listOf(types.listOf(types.string));
+          default = {};
+          type = types.attrsOf types.string;
 
           example = literalExample ''
-            [
-              ["rm -rf *" "fg=white,bold,bg=red"]
-            ]
+            {
+              "rm -rf *" = "fg=white,bold,bg=red";
+            }
           '';
 
           description = ''
@@ -67,14 +61,17 @@ in
           "ZSH_HIGHLIGHT_HIGHLIGHTERS=(${concatStringsSep " " cfg.highlighters})"
         }
 
-        ${optionalString (length(cfg.patterns) > 0)
-          (assert(elem "pattern" cfg.highlighters); (foldl (
-            a: b:
-              assert(length(b) == 2); ''
-                ${a}
-                ZSH_HIGHLIGHT_PATTERNS+=('${elemAt b 0}' '${elemAt b 1}')
-              ''
-          ) "") cfg.patterns)
+        ${let
+            n = attrNames cfg.patterns;
+          in
+            optionalString (length(n) > 0)
+              (assert(elem "pattern" cfg.highlighters); (foldl (
+                a: b:
+                  ''
+                    ${a}
+                    ZSH_HIGHLIGHT_PATTERNS+=('${b}' '${attrByPath [b] "" cfg.patterns}')
+                  ''
+              ) "") n)
         }
       '';
     };

nixos/modules/services/monitoring/dd-agent/dd-agent-defaults.nix

@@ -0,0 +1,8 @@
+# Generated using update-dd-agent-default, please re-run after updating dd-agent. DO NOT EDIT MANUALLY.
+[
+  "auto_conf"
+  "agent_metrics.yaml.default"
+  "disk.yaml.default"
+  "network.yaml.default"
+  "ntp.yaml.default"
+]

nixos/modules/services/monitoring/dd-agent/dd-agent.nix

@@ -16,24 +16,100 @@ let
     forwarder_log_file: /var/log/datadog/forwarder.log
     dogstatsd_log_file: /var/log/datadog/dogstatsd.log
     pup_log_file:       /var/log/datadog/pup.log
+
+    # proxy_host: my-proxy.com
+    # proxy_port: 3128
+    # proxy_user: user
+    # proxy_password: password
+
+    # tags: mytag0, mytag1
     ${optionalString (cfg.tags != null ) "tags: ${concatStringsSep "," cfg.tags }"}
-    ${cfg.extraDdConfig}
+
+    # collect_ec2_tags: no
+    # recent_point_threshold: 30
+    # use_mount: no
+    # listen_port: 17123
+    # graphite_listen_port: 17124
+    # non_local_traffic: no
+    # use_curl_http_client: False
+    # bind_host: localhost
+
+    # use_pup: no
+    # pup_port: 17125
+    # pup_interface: localhost
+    # pup_url: http://localhost:17125
+
+    # dogstatsd_port : 8125
+    # dogstatsd_interval : 10
+    # dogstatsd_normalize : yes
+    # statsd_forward_host: address_of_own_statsd_server
+    # statsd_forward_port: 8125
+
+    # device_blacklist_re: .*\/dev\/mapper\/lxc-box.*
+
+    # ganglia_host: localhost
+    # ganglia_port: 8651
   '';
 
-  etcfiles =
-    map (i: { source = if builtins.hasAttr "config" i
-                       then pkgs.writeText "${i.name}.yaml" i.config
-                       else "${pkgs.dd-agent}/agent/conf.d-system/${i.name}.yaml";
-              target = "dd-agent/conf.d/${i.name}.yaml";
-            }
-        ) cfg.integrations ++
-        [ { source = ddConf;
-            target = "dd-agent/datadog.conf";
-          }
-        ];
+  diskConfig = pkgs.writeText "disk.yaml" ''
+    init_config:
 
-  # restart triggers
-  etcSources = map (i: i.source) etcfiles;
+    instances:
+      - use_mount: no
+  '';
+  
+  networkConfig = pkgs.writeText "network.yaml" ''
+    init_config:
+
+    instances:
+      # Network check only supports one configured instance
+      - collect_connection_state: false
+        excluded_interfaces:
+          - lo
+          - lo0
+  '';
+  
+  postgresqlConfig = pkgs.writeText "postgres.yaml" cfg.postgresqlConfig;
+  nginxConfig = pkgs.writeText "nginx.yaml" cfg.nginxConfig;
+  mongoConfig = pkgs.writeText "mongo.yaml" cfg.mongoConfig;
+  jmxConfig = pkgs.writeText "jmx.yaml" cfg.jmxConfig;
+  processConfig = pkgs.writeText "process.yaml" cfg.processConfig;
+  
+  etcfiles =
+    let
+      defaultConfd = import ./dd-agent-defaults.nix;
+    in (map (f: { source = "${pkgs.dd-agent}/agent/conf.d-system/${f}";
+                  target = "dd-agent/conf.d/${f}";
+                }) defaultConfd) ++ [
+      { source = ddConf;
+        target = "dd-agent/datadog.conf";
+      }
+      { source = diskConfig;
+        target = "dd-agent/conf.d/disk.yaml";
+      }
+      { source = networkConfig;
+        target = "dd-agent/conf.d/network.yaml";
+      } ] ++
+    (optional (cfg.postgresqlConfig != null)
+      { source = postgresqlConfig;
+        target = "dd-agent/conf.d/postgres.yaml";
+      }) ++
+    (optional (cfg.nginxConfig != null)
+      { source = nginxConfig;
+        target = "dd-agent/conf.d/nginx.yaml";
+      }) ++
+    (optional (cfg.mongoConfig != null)
+      { source = mongoConfig;
+        target = "dd-agent/conf.d/mongo.yaml";
+      }) ++
+    (optional (cfg.processConfig != null)
+      { source = processConfig;
+        target = "dd-agent/conf.d/process.yaml";
+      }) ++
+    (optional (cfg.jmxConfig != null)
+      { source = jmxConfig;
+        target = "dd-agent/conf.d/jmx.yaml";
+      });
 
 in {
   options.services.dd-agent = {
@@ -63,46 +139,44 @@ in {
       type = types.uniq (types.nullOr types.string);
     };
 
-    agent = mkOption {
-      description = "The dd-agent package to use. Useful when overriding the package.";
-      default = pkgs.dd-agent;
-      type = types.package;
+    postgresqlConfig = mkOption {
+      description = "Datadog PostgreSQL integration configuration";
+      default = null;
+      type = types.uniq (types.nullOr types.string);
     };
 
-    integrations = mkOption {
+    nginxConfig = mkOption {
+      description = "Datadog nginx integration configuration";
+      default = null;
+      type = types.uniq (types.nullOr types.string);
+    };
+    
+    mongoConfig = mkOption {
+      description = "MongoDB integration configuration";
+      default = null;
+      type = types.uniq (types.nullOr types.string);
+    };
+
+    jmxConfig = mkOption {
+      description = "JMX integration configuration";
+      default = null;
+      type = types.uniq (types.nullOr types.string);
+    };
+
+    processConfig = mkOption {
       description = ''
-        Any integrations to use. Default config used if none
-        specified. It is currently up to the user to make sure that
-        the dd-agent package used has all the dependencies chosen
-        integrations require in scope.
-      '';
-      type = types.listOf (types.attrsOf types.string);
-      default = [];
-      example = ''
-        [ { name = "elastic";
-            config = '''
-              init_config:
-
-              instances:
-                - url: http://localhost:9200
-            ''';
-          }
-          { name = "nginx"; }
-          { name = "ntp"; }
-          { name = "network"; }
-        ]
+        Process integration configuration
+ 
+        See http://docs.datadoghq.com/integrations/process/
       '';
+      default = null;
+      type = types.uniq (types.nullOr types.string);
     };
 
-    extraDdConfig = mkOption {
-      description = "Extra settings to append to datadog agent config.";
-      default = "";
-      type = types.string;
-    };
   };
 
   config = mkIf cfg.enable {
-    environment.systemPackages = [ cfg.agent pkgs.sysstat pkgs.procps ];
+    environment.systemPackages = [ pkgs."dd-agent" pkgs.sysstat pkgs.procps ];
 
     users.extraUsers.datadog = {
       description = "Datadog Agent User";
@@ -116,7 +190,7 @@ in {
 
     systemd.services.dd-agent = {
       description = "Datadog agent monitor";
-      path = [ cfg.agent pkgs.python pkgs.sysstat pkgs.procps ];
+      path = [ pkgs."dd-agent" pkgs.python pkgs.sysstat pkgs.procps ];
       wantedBy = [ "multi-user.target" ];
       serviceConfig = {
         ExecStart = "${pkgs.dd-agent}/bin/dd-agent foreground";
@@ -125,12 +199,28 @@ in {
         Restart = "always";
         RestartSec = 2;
       };
-      restartTriggers = [ pkgs.dd-agent ddConf ] ++ etcSources;
+      restartTriggers = [ pkgs.dd-agent ddConf diskConfig networkConfig postgresqlConfig nginxConfig mongoConfig jmxConfig processConfig ];
     };
 
-    systemd.services.dd-jmxfetch = lib.mkIf (builtins.any (i: i.name == "jmx") cfg.integrations) {
+    systemd.services.dogstatsd = {
+      description = "Datadog statsd";
+      path = [ pkgs."dd-agent" pkgs.python pkgs.procps ];
+      wantedBy = [ "multi-user.target" ];
+      serviceConfig = {
+        ExecStart = "${pkgs.dd-agent}/bin/dogstatsd start";
+        User = "datadog";
+        Group = "datadog";
+        Type = "forking";
+        PIDFile = "/tmp/dogstatsd.pid";
+        Restart = "always";
+        RestartSec = 2;
+      };
+      restartTriggers = [ pkgs.dd-agent ddConf diskConfig networkConfig postgresqlConfig nginxConfig mongoConfig jmxConfig processConfig ];
+    };
+
+    systemd.services.dd-jmxfetch = lib.mkIf (cfg.jmxConfig != null) {
       description = "Datadog JMX Fetcher";
-      path = [ cfg.agent pkgs.python pkgs.sysstat pkgs.procps pkgs.jdk ];
+      path = [ pkgs."dd-agent" pkgs.python pkgs.sysstat pkgs.procps pkgs.jdk ];
       wantedBy = [ "multi-user.target" ];
       serviceConfig = {
         ExecStart = "${pkgs.dd-agent}/bin/dd-jmxfetch";
@@ -139,7 +229,7 @@ in {
         Restart = "always";
         RestartSec = 2;
       };
-      restartTriggers = [ cfg.agent ddConf ] ++ etcSources;
+      restartTriggers = [ pkgs.dd-agent ddConf diskConfig networkConfig postgresqlConfig nginxConfig mongoConfig jmxConfig ];
     };
 
     environment.etc = etcfiles;

nixos/modules/services/monitoring/dd-agent/update-dd-agent-defaults

@@ -0,0 +1,9 @@
+#!/usr/bin/env bash
+dd=$(nix-build --no-out-link -A dd-agent ../../../..)
+echo '# Generated using update-dd-agent-default, please re-run after updating dd-agent. DO NOT EDIT MANUALLY.' > dd-agent-defaults.nix
+echo '[' >> dd-agent-defaults.nix
+echo '  "auto_conf"' >> dd-agent-defaults.nix
+for f in $(find $dd/agent/conf.d-system -maxdepth 1 -type f | grep -v '\.example' | sort); do
+  echo "  \"$(basename $f)\"" >> dd-agent-defaults.nix
+done
+echo ']' >> dd-agent-defaults.nix

nixos/modules/services/networking/dnschain.nix

@@ -17,7 +17,7 @@ let
     host = ${cfg.dns.address}
     port = ${toString cfg.dns.port}
     oldDNSMethod = NO_OLD_DNS
-    externalIP = ${cfg.dns.address}
+    externalIP = ${cfg.dns.externalAddress}
 
     [http]
     host = ${cfg.api.hostname}
@@ -47,8 +47,18 @@ in
         type = types.str;
         default = "127.0.0.1";
         description = ''
-          The IP address that will be used to reach this machine.
-          Leave this unchanged if you do not wish to directly expose the DNSChain resolver.
+          The IP address the DNSChain resolver will bind to.
+          Leave this unchanged if you do not wish to directly expose the resolver.
+        '';
+      };
+
+      dns.externalAddress = mkOption {
+        type = types.str;
+        default = cfg.dns.address;
+        description = ''
+           The IP address used by clients to reach the resolver and the value of
+           the <literal>namecoin.dns</literal> record. Set this in case the bind address
+           is not the actual IP address (e.g. the machine is behind a NAT).
         '';
       };
 

nixos/modules/services/networking/networkmanager.nix

@@ -12,6 +12,7 @@ let
   configFile = writeText "NetworkManager.conf" ''
     [main]
     plugins=keyfile
+    dhcp=${cfg.dhcp}
     dns=${if cfg.useDnsmasq then "dnsmasq" else "default"}
 
     [keyfile]
@@ -21,7 +22,7 @@ let
       ''unmanaged-devices=${lib.concatStringsSep ";" cfg.unmanaged}''}
 
     [logging]
-    level=WARN
+    level=${cfg.logLevel}
 
     [connection]
     ipv6.ip6-privacy=2
@@ -138,6 +139,22 @@ in {
         apply = list: (attrValues cfg.basePackages) ++ list;
       };
 
+      dhcp = mkOption {
+        type = types.enum [ "dhclient" "dhcpcd" "internal" ];
+        default = "dhclient";
+        description = ''
+          Which program (or internal library) should be used for DHCP.
+        '';
+      };
+
+      logLevel = mkOption {
+        type = types.enum [ "OFF" "ERR" "WARN" "INFO" "DEBUG" "TRACE" ];
+        default = "WARN";
+        description = ''
+          Set the default logging verbosity level.
+        '';
+      };
+
       appendNameservers = mkOption {
         type = types.listOf types.str;
         default = [];
@@ -181,7 +198,7 @@ in {
             };
 
             type = mkOption {
-              type = types.enum (attrNames dispatcherTypesSubdirMap); 
+              type = types.enum (attrNames dispatcherTypesSubdirMap);
               default = "basic";
               description = ''
                 Dispatcher hook type. Only basic hooks are currently available.

nixos/modules/services/networking/resilio.nix

@@ -0,0 +1,268 @@
+{ config, lib, pkgs, ... }:
+
+with lib;
+
+let
+  cfg = config.services.resilio;
+
+  resilioSync = pkgs.resilio-sync;
+
+  sharedFoldersRecord = map (entry: {
+    secret = entry.secret;
+    dir = entry.directory;
+
+    use_relay_server = entry.useRelayServer;
+    use_tracker = entry.useTracker;
+    use_dht = entry.useDHT;
+
+    search_lan = entry.searchLAN;
+    use_sync_trash = entry.useSyncTrash;
+    known_hosts = knownHosts;
+  }) cfg.sharedFolders;
+
+  configFile = pkgs.writeText "config.json" (builtins.toJSON ({
+    device_name = cfg.deviceName;
+    storage_path = cfg.storagePath;
+    listening_port = cfg.listeningPort;
+    use_gui = false;
+    check_for_updates = cfg.checkForUpdates;
+    use_upnp = cfg.useUpnp;
+    download_limit = cfg.downloadLimit;
+    upload_limit = cfg.uploadLimit;
+    lan_encrypt_data = cfg.encryptLAN;
+  } // optionalAttrs cfg.enableWebUI {
+    webui = { listen = "${cfg.httpListenAddr}:${toString cfg.httpListenPort}"; } //
+      (optionalAttrs (cfg.httpLogin != "") { login = cfg.httpLogin; }) //
+      (optionalAttrs (cfg.httpPass != "") { password = cfg.httpPass; }) //
+      (optionalAttrs (cfg.apiKey != "") { api_key = cfg.apiKey; }) //
+      (optionalAttrs (cfg.directoryRoot != "") { directory_root = cfg.directoryRoot; });
+  } // optionalAttrs (sharedFoldersRecord != []) {
+    shared_folders = sharedFoldersRecord;
+  }));
+
+in
+{
+  options = {
+    services.resilio = {
+      enable = mkOption {
+        type = types.bool;
+        default = false;
+        description = ''
+          If enabled, start the Resilio Sync daemon. Once enabled, you can
+          interact with the service through the Web UI, or configure it in your
+          NixOS configuration. Enabling the <literal>resilio</literal> service
+          also installs a systemd user unit which can be used to start
+          user-specific copies of the daemon. Once installed, you can use
+          <literal>systemctl --user start resilio</literal> as your user to start
+          the daemon using the configuration file located at
+          <literal>$HOME/.config/resilio-sync/config.json</literal>.
+        '';
+      };
+
+      deviceName = mkOption {
+        type = types.str;
+        example = "Voltron";
+        default = config.networking.hostName;
+        description = ''
+          Name of the Resilio Sync device.
+        '';
+      };
+
+      listeningPort = mkOption {
+        type = types.int;
+        default = 0;
+        example = 44444;
+        description = ''
+          Listening port. Defaults to 0 which randomizes the port.
+        '';
+      };
+
+      checkForUpdates = mkOption {
+        type = types.bool;
+        default = true;
+        description = ''
+          Determines whether to check for updates and alert the user
+          about them in the UI.
+        '';
+      };
+
+      useUpnp = mkOption {
+        type = types.bool;
+        default = true;
+        description = ''
+          Use Universal Plug-n-Play (UPnP)
+        '';
+      };
+
+      downloadLimit = mkOption {
+        type = types.int;
+        default = 0;
+        example = 1024;
+        description = ''
+          Download speed limit. 0 is unlimited (default).
+        '';
+      };
+
+      uploadLimit = mkOption {
+        type = types.int;
+        default = 0;
+        example = 1024;
+        description = ''
+          Upload speed limit. 0 is unlimited (default).
+        '';
+      };
+
+      httpListenAddr = mkOption {
+        type = types.str;
+        default = "0.0.0.0";
+        example = "1.2.3.4";
+        description = ''
+          HTTP address to bind to.
+        '';
+      };
+
+      httpListenPort = mkOption {
+        type = types.int;
+        default = 9000;
+        description = ''
+          HTTP port to bind on.
+        '';
+      };
+
+      httpLogin = mkOption {
+        type = types.str;
+        example = "allyourbase";
+        default = "";
+        description = ''
+          HTTP web login username.
+        '';
+      };
+
+      httpPass = mkOption {
+        type = types.str;
+        example = "arebelongtous";
+        default = "";
+        description = ''
+          HTTP web login password.
+        '';
+      };
+
+      encryptLAN = mkOption {
+        type = types.bool;
+        default = true;
+        description = "Encrypt LAN data.";
+      };
+
+      enableWebUI = mkOption {
+        type = types.bool;
+        default = false;
+        description = ''
+          Enable Web UI for administration. Bound to the specified
+          <literal>httpListenAddress</literal> and
+          <literal>httpListenPort</literal>.
+          '';
+      };
+
+      storagePath = mkOption {
+        type = types.path;
+        default = "/var/lib/resilio-sync/";
+        description = ''
+          Where BitTorrent Sync will store it's database files (containing
+          things like username info and licenses). Generally, you should not
+          need to ever change this.
+        '';
+      };
+
+      apiKey = mkOption {
+        type = types.str;
+        default = "";
+        description = "API key, which enables the developer API.";
+      };
+
+      directoryRoot = mkOption {
+        type = types.str;
+        default = "";
+        example = "/media";
+        description = "Default directory to add folders in the web UI.";
+      };
+
+      sharedFolders = mkOption {
+        default = [];
+        example =
+          [ { secret         = "AHMYFPCQAHBM7LQPFXQ7WV6Y42IGUXJ5Y";
+              directory      = "/home/user/sync_test";
+              useRelayServer = true;
+              useTracker     = true;
+              useDHT         = false;
+              searchLAN      = true;
+              useSyncTrash   = true;
+              knownHosts     = [
+                "192.168.1.2:4444"
+                "192.168.1.3:4444"
+              ];
+            }
+          ];
+        description = ''
+          Shared folder list. If enabled, web UI must be
+          disabled. Secrets can be generated using <literal>rslsync
+          --generate-secret</literal>. Note that this secret will be
+          put inside the Nix store, so it is realistically not very
+          secret.
+
+          If you would like to be able to modify the contents of this
+          directories, it is recommended that you make your user a
+          member of the <literal>resilio</literal> group.
+
+          Directories in this list should be in the
+          <literal>resilio</literal> group, and that group must have
+          write access to the directory. It is also recommended that
+          <literal>chmod g+s</literal> is applied to the directory
+          so that any sub directories created will also belong to
+          the <literal>resilio</literal> group. Also,
+          <literal>setfacl -d -m group:resilio:rwx</literal> and
+          <literal>setfacl -m group:resilio:rwx</literal> should also
+          be applied so that the sub directories are writable by
+          the group.
+        '';
+      };
+    };
+  };
+
+  config = mkIf cfg.enable {
+    assertions =
+      [ { assertion = cfg.deviceName != "";
+          message   = "Device name cannot be empty.";
+        }
+        { assertion = cfg.enableWebUI -> cfg.sharedFolders == [];
+          message   = "If using shared folders, the web UI cannot be enabled.";
+        }
+        { assertion = cfg.apiKey != "" -> cfg.enableWebUI;
+          message   = "If you're using an API key, you must enable the web server.";
+        }
+      ];
+
+    users.extraUsers.rslsync = {
+      description     = "Resilio Sync Service user";
+      home            = cfg.storagePath;
+      createHome      = true;
+      uid             = config.ids.uids.rslsync;
+      group           = "rslsync";
+    };
+
+    users.extraGroups = [ { name = "rslsync"; } ];
+
+    systemd.services.resilio = with pkgs; {
+      description = "Resilio Sync Service";
+      wantedBy    = [ "multi-user.target" ];
+      after       = [ "network.target" "local-fs.target" ];
+      serviceConfig = {
+        Restart   = "on-abort";
+        UMask     = "0002";
+        User      = "rslsync";
+        ExecStart = ''
+          ${resilioSync}/bin/rslsync --nodaemon --config ${configFile}
+        '';
+      };
+    };
+  };
+}

pkgs/applications/audio/airwave/default.nix

@@ -1,5 +1,5 @@
 { stdenv, cmake, fetchFromGitHub, file, gcc_multi, libX11, makeWrapper
-, overrideCC, qt5, requireFile, unzip, wineStable
+, overrideCC, qt5, requireFile, unzip, wine
 }:
 
 let
@@ -26,7 +26,8 @@ let
     installPhase = "cp -r . $out";
   };
 
-  wine-wow64 = wineStable.override {
+  wine-wow64 = wine.override {
+    wineRelease = "stable";
     wineBuild = "wineWow";
   };
 

pkgs/applications/audio/csound/default.nix

@@ -1,20 +1,20 @@
-{ stdenv, fetchFromGitHub, cmake, libsndfile, flex, bison, boost
+{ stdenv, fetchFromGitHub, cmake, libsndfile, libsamplerate, flex, bison, boost, gettext
 , alsaLib ? null
 , libpulseaudio ? null
-, tcltk ? null
+, libjack2 ? null
 , liblo ? null
-
-# maybe csound can be compiled with support for those, see configure output
-# , ladspa ? null
-# , fluidsynth ? null
-# , jack ? null
-# , gmm ? null
-# , wiiuse ? null
+, ladspa-sdk ? null
+, fluidsynth ? null
+# , gmm ? null  # opcodes don't build with gmm 5.1
+, eigen ? null
+, curl ? null
+, tcltk ? null
+, fltk ? null
 }:
 
 stdenv.mkDerivation rec {
-  name = "csound-6.08.1";
-  version = "6.08.1";
+  name = "csound-${version}";
+  version = "6.09.0";
 
   enableParallelBuilding = true;
 
@@ -24,11 +24,18 @@ stdenv.mkDerivation rec {
     owner = "csound";
     repo = "csound";
     rev = version;
-    sha256 = "03xnva17sw35ga3n96x1zdfgw913dga1hccly85wzfn0kxz4rld9";
+    sha256 = "1vfb0mab89psfwidadjrn5mbzq3bhjbyrrmyp98yp0xm6a8cssih";
   };
 
-  nativeBuildInputs = [ cmake flex bison ];
-  buildInputs = [ libsndfile alsaLib libpulseaudio tcltk boost liblo ];
+  cmakeFlags = [ "-DBUILD_CSOUND_AC=0" ] # fails to find Score.hpp
+    ++ stdenv.lib.optional (libjack2 != null) "-DJACK_HEADER=${libjack2}/include/jack/jack.h";
+
+  nativeBuildInputs = [ cmake flex bison gettext ];
+  buildInputs = [ libsndfile libsamplerate boost ]
+    ++ builtins.filter (optional: optional != null) [
+      alsaLib libpulseaudio libjack2
+      liblo ladspa-sdk fluidsynth eigen
+      curl tcltk fltk ];
 
   meta = with stdenv.lib; {
     description = "Sound design, audio synthesis, and signal processing system, providing facilities for music composition and performance on all major operating systems and platforms";

pkgs/applications/editors/vscode/default.nix

@@ -2,7 +2,7 @@
   makeWrapper, libXScrnSaver, libxkbfile }:
 
 let
-  version = "1.12.1";
+  version = "1.12.2";
   channel = "stable";
 
   plat = {
@@ -12,9 +12,9 @@ let
   }.${stdenv.system};
 
   sha256 = {
-    "i686-linux" = "0i4zqxbq7bm2afzyny3a53sq1fghlz5an1z8fkqh5i3029s635h9";
-    "x86_64-linux" = "0kwmfiyb70if4svamnivbc9w65c14j3lrn5vysqkc4b8hlk4r75i";
-    "x86_64-darwin" = "1dgs4k4m885qzammhj0x9k6pd8rayxn61iq3fiazp0w8v5bhl4l5";
+    "i686-linux" = "0221s8vx32haqr31wkkm637gya3vljbkim59i7a2hhwxh2gcs2fk";
+    "x86_64-linux" = "0p6ck2lc9lln96lib5r5yfbrd04rgsbzhvf1lx2kykn428ddxi9s";
+    "x86_64-darwin" = "1s7hyr245v4z2g357m7ajnh8y1cqixricpkx329xls4292qb7rh4";
   }.${stdenv.system};
 
   archive_fmt = if stdenv.system == "x86_64-darwin" then "zip" else "tar.gz";

pkgs/applications/graphics/gimp/2.8.nix

@@ -8,7 +8,7 @@ let
   inherit (python2Packages) pygtk wrapPython python;
 in stdenv.mkDerivation rec {
   name = "gimp-${version}";
-  version = "2.8.20";
+  version = "2.8.22";
 
   # This declarations for `gimp-with-plugins` wrapper,
   # (used for determining $out/lib/gimp/${majorVersion}/ paths)
@@ -18,7 +18,7 @@ in stdenv.mkDerivation rec {
 
   src = fetchurl {
     url = "http://download.gimp.org/pub/gimp/v2.8/${name}.tar.bz2";
-    sha256 = "939ca1df70be865c672ffd654f4e20f188121d01601c5c90237214101533c805";
+    sha256 = "12k3lp938qdc9cqj29scg55f3bb8iav2fysd29w0s49bqmfa71wi";
   };
 
   buildInputs =

pkgs/applications/misc/albert/default.nix

@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   name    = "albert-${version}";
-  version = "0.11.1";
+  version = "0.11.3";
 
   src = fetchFromGitHub {
     owner  = "albertlauncher";
     repo   = "albert";
     rev    = "v${version}";
-    sha256 = "1ai0h3lbdac0a4xzd6pm3i0r8w0gfdnw9rdkj0szyzvm428f88s6";
+    sha256 = "0ddz6h1334b9kqy1lfi7qa21znm3l0b9h0d4s62llxdasv103jh5";
   };
 
   nativeBuildInputs = [ cmake makeQtWrapper ];

pkgs/applications/misc/apvlv/default.nix

@@ -1,5 +1,5 @@
 { stdenv, fetchFromGitHub, fetchpatch, cmake, pkgconfig, pcre, libxkbcommon, epoxy
-, gtk3, poppler, freetype, libpthreadstubs, libXdmcp, libxshmfence
+, gtk3, poppler, freetype, libpthreadstubs, libXdmcp, libxshmfence, wrapGAppsHook
 }:
 
 stdenv.mkDerivation rec {
@@ -22,6 +22,10 @@ stdenv.mkDerivation rec {
     libpthreadstubs libXdmcp libxshmfence # otherwise warnings in compilation
   ];
 
+  nativeBuildInputs = [
+    wrapGAppsHook
+  ];
+
   patches = [
     (fetchpatch {
       url = "https://github.com/naihe2010/apvlv/commit/d432635b9c5ea6c052a2ae1fb71aedec5c4ad57a.patch";
@@ -41,6 +45,7 @@ stdenv.mkDerivation rec {
     # displays pdfStartup.pdf as default pdf entry
     mkdir -p $out/share/doc/apvlv/
     cp ../Startup.pdf $out/share/doc/apvlv/Startup.pdf
+    cp ../main_menubar.glade $out/share/doc/apvlv/main_menubar.glade
   '';
 
   meta = with stdenv.lib; {

pkgs/applications/misc/calibre/default.nix

@@ -62,6 +62,8 @@ stdenv.mkDerivation rec {
   ]);
 
   installPhase = ''
+    runHook preInstall
+
     export HOME=$TMPDIR/fakehome
     export POPPLER_INC_DIR=${poppler_utils.dev}/include/poppler
     export POPPLER_LIB_DIR=${poppler_utils.out}/lib
@@ -92,6 +94,8 @@ stdenv.mkDerivation rec {
     for entry in $out/share/applications/*.desktop; do
       substituteAllInPlace $entry
     done
+
+    runHook postInstall
   '';
 
   calibreDesktopItem = makeDesktopItem {

pkgs/applications/misc/gollum/Gemfile.lock

@@ -2,48 +2,53 @@ GEM
   remote: https://rubygems.org/
   specs:
     charlock_holmes (0.7.3)
-    diff-lcs (1.2.5)
-    github-markup (1.3.3)
-    gitlab-grit (2.7.3)
+    diff-lcs (1.3)
+    gemojione (3.2.0)
+      json
+    github-markup (1.6.0)
+    gitlab-grit (2.8.1)
       charlock_holmes (~> 0.6)
       diff-lcs (~> 1.1)
-      mime-types (~> 1.15)
+      mime-types (>= 1.16, < 3)
       posix-spawn (~> 0.3)
-    gollum (4.0.1)
+    gollum (4.1.1)
+      gemojione (~> 3.2)
       gollum-lib (~> 4.0, >= 4.0.1)
-      kramdown (~> 1.8.0)
+      kramdown (~> 1.9.0)
       mustache (>= 0.99.5, < 1.0.0)
       sinatra (~> 1.4, >= 1.4.4)
-      useragent (~> 0.14.0)
-    gollum-grit_adapter (1.0.0)
+      useragent (~> 0.16.2)
+    gollum-grit_adapter (1.0.1)
       gitlab-grit (~> 2.7, >= 2.7.1)
-    gollum-lib (4.1.0)
-      github-markup (~> 1.3.3)
+    gollum-lib (4.2.5)
+      gemojione (~> 3.2)
+      github-markup (~> 1.6)
       gollum-grit_adapter (~> 1.0)
       nokogiri (~> 1.6.4)
-      rouge (~> 1.9)
-      sanitize (~> 2.1.0)
-      stringex (~> 2.5.1)
-    kramdown (1.8.0)
-    mime-types (1.25.1)
-    mini_portile2 (2.0.0)
+      rouge (~> 2.0)
+      sanitize (~> 2.1)
+      stringex (~> 2.6)
+    json (2.1.0)
+    kramdown (1.9.0)
+    mime-types (2.99.3)
+    mini_portile2 (2.1.0)
     mustache (0.99.8)
-    nokogiri (1.6.7.2)
-      mini_portile2 (~> 2.0.0.rc2)
-    posix-spawn (0.3.11)
-    rack (1.6.4)
+    nokogiri (1.6.8.1)
+      mini_portile2 (~> 2.1.0)
+    posix-spawn (0.3.13)
+    rack (1.6.8)
     rack-protection (1.5.3)
       rack
-    rouge (1.10.1)
+    rouge (2.0.7)
     sanitize (2.1.0)
       nokogiri (>= 1.4.4)
-    sinatra (1.4.7)
+    sinatra (1.4.8)
       rack (~> 1.5)
       rack-protection (~> 1.4)
       tilt (>= 1.3, < 3)
-    stringex (2.5.2)
-    tilt (2.0.2)
-    useragent (0.14.0)
+    stringex (2.7.1)
+    tilt (2.0.7)
+    useragent (0.16.8)
 
 PLATFORMS
   ruby
@@ -52,4 +57,4 @@ DEPENDENCIES
   gollum
 
 BUNDLED WITH
-   1.10.6
+   1.15.0

pkgs/applications/misc/gollum/default.nix

@@ -1,16 +1,32 @@
-{ stdenv, lib, bundlerEnv, ruby_2_2, icu, zlib }:
+{ stdenv, bundlerEnv, ruby, makeWrapper
+, git }:
 
-bundlerEnv rec {
-  name = "gollum-${version}";
-  version = "4.0.1";
+stdenv.mkDerivation rec {
+  name = "${pname}-${version}";
+  pname = "gollum";
+  version = (import ./gemset.nix).gollum.version;
 
-  ruby = ruby_2_2;
-  gemdir = ./.;
+  nativeBuildInputs = [ makeWrapper ];
 
-  meta = with lib; {
+  env = bundlerEnv {
+    name = "${name}-gems";
+    inherit pname ruby;
+    gemdir = ./.;
+  };
+
+  phases = [ "installPhase" ];
+
+  installPhase = ''
+    mkdir -p $out/bin
+    makeWrapper ${env}/bin/gollum $out/bin/gollum \
+      --prefix PATH ":" ${stdenv.lib.makeBinPath [ git ]}
+  '';
+
+  meta = with stdenv.lib; {
     description = "A simple, Git-powered wiki";
+    homepage = "https://github.com/gollum/gollum";
     license = licenses.mit;
-    maintainers = with maintainers; [ jgillich ];
+    maintainers = with maintainers; [ jgillich primeos ];
     platforms = platforms.unix;
   };
 }

pkgs/applications/misc/gollum/gemset.nix

@@ -1,170 +1,186 @@
 {
-  useragent = {
-    version = "0.14.0";
-    source = {
-      type = "gem";
-      remotes = ["https://rubygems.org"];
-      sha256 = "124r3mgkw1zjymsqq9r25zh1vwjrjgiji5fm620z53lpmmryj22j";
-    };
-  };
-  tilt = {
-    version = "2.0.2";
-    source = {
-      type = "gem";
-      remotes = ["https://rubygems.org"];
-      sha256 = "0lkd40xfdqkp333vdfhrfjmi2y7k2hjs4azawfb62mrkfp7ivj84";
-    };
-  };
-  stringex = {
-    version = "2.5.2";
-    source = {
-      type = "gem";
-      remotes = ["https://rubygems.org"];
-      sha256 = "150adm7rfh6r9b5ra6vk75mswf9m3wwyslcf8f235a08m29fxa17";
-    };
-  };
-  sinatra = {
-    version = "1.4.7";
-    source = {
-      type = "gem";
-      remotes = ["https://rubygems.org"];
-      sha256 = "1b81kbr65mmcl9cdq2r6yc16wklyp798rxkgmm5pr9fvsj7jwmxp";
-    };
-  };
-  sanitize = {
-    version = "2.1.0";
-    source = {
-      type = "gem";
-      remotes = ["https://rubygems.org"];
-      sha256 = "0xsv6xqrlz91rd8wifjknadbl3z5h6qphmxy0hjb189qbdghggn3";
-    };
-  };
-  rouge = {
-    version = "1.10.1";
-    source = {
-      type = "gem";
-      remotes = ["https://rubygems.org"];
-      sha256 = "0wp8as9ypdy18kdj9h70kny1rdfq71mr8cj2bpahr9vxjjvjasqz";
-    };
-  };
-  rack-protection = {
-    version = "1.5.3";
-    source = {
-      type = "gem";
-      remotes = ["https://rubygems.org"];
-      sha256 = "0cvb21zz7p9wy23wdav63z5qzfn4nialik22yqp6gihkgfqqrh5r";
-    };
-  };
-  rack = {
-    version = "1.6.4";
-    source = {
-      type = "gem";
-      remotes = ["https://rubygems.org"];
-      sha256 = "09bs295yq6csjnkzj7ncj50i6chfxrhmzg1pk6p0vd2lb9ac8pj5";
-    };
-  };
-  posix-spawn = {
-    version = "0.3.11";
-    source = {
-      type = "gem";
-      remotes = ["https://rubygems.org"];
-      sha256 = "052lnxbkvlnwfjw4qd7vn2xrlaaqiav6f5x5bcjin97bsrfq6cmr";
-    };
-  };
-  nokogiri = {
-    version = "1.6.7.2";
-    source = {
-      type = "gem";
-      remotes = ["https://rubygems.org"];
-      sha256 = "11sbmpy60ynak6s3794q32lc99hs448msjy8rkp84ay7mq7zqspv";
-    };
-  };
-  mustache = {
-    version = "0.99.8";
-    source = {
-      type = "gem";
-      remotes = ["https://rubygems.org"];
-      sha256 = "1g5hplm0k06vwxwqzwn1mq5bd02yp0h3rym4zwzw26aqi7drcsl2";
-    };
-  };
-  mini_portile2 = {
-    version = "2.0.0";
-    source = {
-      type = "gem";
-      remotes = ["https://rubygems.org"];
-      sha256 = "056drbn5m4khdxly1asmiik14nyllswr6sh3wallvsywwdiryz8l";
-    };
-  };
-  mime-types = {
-    version = "1.25.1";
-    source = {
-      type = "gem";
-      remotes = ["https://rubygems.org"];
-      sha256 = "0mhzsanmnzdshaba7gmsjwnv168r1yj8y0flzw88frw1cickrvw8";
-    };
-  };
-  kramdown = {
-    version = "1.8.0";
-    source = {
-      type = "gem";
-      remotes = ["https://rubygems.org"];
-      sha256 = "0ryqq055h5n10c1cfba6pxsssa907l2hkw29anp0d41ryh47ca2l";
-    };
-  };
-  gollum-lib = {
-    version = "4.1.0";
-    source = {
-      type = "gem";
-      remotes = ["https://rubygems.org"];
-      sha256 = "01s8pgzhc3cgcmsy6hh79wrcbn5vbadniq2a7d4qw87kpq7mzfdm";
-    };
-  };
-  gollum-grit_adapter = {
-    version = "1.0.0";
-    source = {
-      type = "gem";
-      remotes = ["https://rubygems.org"];
-      sha256 = "02c5qfq0s0kx2ifnpbnbgz6258fl7rchzzzc7vpx72shi8gbpac7";
-    };
-  };
-  gollum = {
-    version = "4.0.1";
-    source = {
-      type = "gem";
-      remotes = ["https://rubygems.org"];
-      sha256 = "02pgx083sns75zgnqx94p5h5bpr7cfiw5mys4ayb4k33hcjm6ydg";
-    };
-  };
-  gitlab-grit = {
-    version = "2.7.3";
-    source = {
-      type = "gem";
-      remotes = ["https://rubygems.org"];
-      sha256 = "0nv8shx7w7fww8lf5a2rbvf7bq173rllm381m6x7g1i0qqc68q1b";
-    };
-  };
-  github-markup = {
-    version = "1.3.3";
-    source = {
-      type = "gem";
-      remotes = ["https://rubygems.org"];
-      sha256 = "01r901wcgn0gs0n9h684gs5n90y1vaj9lxnx4z5ig611jwa43ivq";
-    };
-  };
-  diff-lcs = {
-    version = "1.2.5";
-    source = {
-      type = "gem";
-      remotes = ["https://rubygems.org"];
-      sha256 = "1vf9civd41bnqi6brr5d9jifdw73j9khc6fkhfl1f8r9cpkdvlx1";
-    };
-  };
   charlock_holmes = {
-    version = "0.7.3";
     source = {
-      type = "gem";
       remotes = ["https://rubygems.org"];
       sha256 = "0jsl6k27wjmssxbwv9wpf7hgp9r0nvizcf6qpjnr7qs2nia53lf7";
+      type = "gem";
     };
+    version = "0.7.3";
+  };
+  diff-lcs = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "18w22bjz424gzafv6nzv98h0aqkwz3d9xhm7cbr1wfbyas8zayza";
+      type = "gem";
+    };
+    version = "1.3";
+  };
+  gemojione = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0svj3hsmwyr306vg75cd7p9i4bwnajrda60n2vhiav2cvhnkawik";
+      type = "gem";
+    };
+    version = "3.2.0";
+  };
+  github-markup = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1g538d7kcj2iw4d9ll8266d8n526hz2fbx7zlx8z7gxg1gzwiki9";
+      type = "gem";
+    };
+    version = "1.6.0";
+  };
+  gitlab-grit = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0lf1cr6pzqrbnxiiwym6q74b1a2ihdi91dynajk8hi1p093hl66n";
+      type = "gem";
+    };
+    version = "2.8.1";
+  };
+  gollum = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0jrafhy8p9pgvya0gj2g6knrpg58g65s7j9bcyfj6fp4n2dz2w7s";
+      type = "gem";
+    };
+    version = "4.1.1";
+  };
+  gollum-grit_adapter = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0fcibm63v1afc0fj5rki0mm51m7nndil4cjcjjvkh3yigfn4nr4b";
+      type = "gem";
+    };
+    version = "1.0.1";
+  };
+  gollum-lib = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0399lfqv3hbpr7v14p9snyimva440d2mb8y7xm2zlgwv7l0n9z0z";
+      type = "gem";
+    };
+    version = "4.2.5";
+  };
+  json = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "01v6jjpvh3gnq6sgllpfqahlgxzj50ailwhj9b3cd20hi2dx0vxp";
+      type = "gem";
+    };
+    version = "2.1.0";
+  };
+  kramdown = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "12sral2xli39mnr4b9m2sxdlgam4ni0a1mkxawc5311z107zj3p0";
+      type = "gem";
+    };
+    version = "1.9.0";
+  };
+  mime-types = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "03j98xr0qw2p2jkclpmk7pm29yvmmh0073d8d43ajmr0h3w7i5l9";
+      type = "gem";
+    };
+    version = "2.99.3";
+  };
+  mini_portile2 = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1y25adxb1hgg1wb2rn20g3vl07qziq6fz364jc5694611zz863hb";
+      type = "gem";
+    };
+    version = "2.1.0";
+  };
+  mustache = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1g5hplm0k06vwxwqzwn1mq5bd02yp0h3rym4zwzw26aqi7drcsl2";
+      type = "gem";
+    };
+    version = "0.99.8";
+  };
+  nokogiri = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "045xdg0w7nnsr2f2gb7v7bgx53xbc9dxf0jwzmh2pr3jyrzlm0cj";
+      type = "gem";
+    };
+    version = "1.6.8.1";
+  };
+  posix-spawn = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1pmxmpins57qrbr31bs3bm7gidhaacmrp4md6i962gvpq4gyfcjw";
+      type = "gem";
+    };
+    version = "0.3.13";
+  };
+  rack = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "19m7aixb2ri7p1n0iqaqx8ldi97xdhvbxijbyrrcdcl6fv5prqza";
+      type = "gem";
+    };
+    version = "1.6.8";
+  };
+  rack-protection = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0cvb21zz7p9wy23wdav63z5qzfn4nialik22yqp6gihkgfqqrh5r";
+      type = "gem";
+    };
+    version = "1.5.3";
+  };
+  rouge = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0sfikq1q8xyqqx690iiz7ybhzx87am4w50w8f2nq36l3asw4x89d";
+      type = "gem";
+    };
+    version = "2.0.7";
+  };
+  sanitize = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0xsv6xqrlz91rd8wifjknadbl3z5h6qphmxy0hjb189qbdghggn3";
+      type = "gem";
+    };
+    version = "2.1.0";
+  };
+  sinatra = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0byxzl7rx3ki0xd7aiv1x8mbah7hzd8f81l65nq8857kmgzj1jqq";
+      type = "gem";
+    };
+    version = "1.4.8";
+  };
+  stringex = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1zc93v00av643lc6njl09wwki7h5yqayhh1din8zqfylw814l1dv";
+      type = "gem";
+    };
+    version = "2.7.1";
+  };
+  tilt = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1is1ayw5049z8pd7slsk870bddyy5g2imp4z78lnvl8qsl8l0s7b";
+      type = "gem";
+    };
+    version = "2.0.7";
+  };
+  useragent = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1139cjqyv1hk1qcw89k81ajjkqyakqgbcyvmfrsmjqi8yn9kgqhq";
+      type = "gem";
+    };
+    version = "0.16.8";
   };
 }

pkgs/applications/misc/inspectrum/default.nix

@@ -10,14 +10,13 @@
 }:
 
 stdenv.mkDerivation rec {
-  name = "inspectrum-${version}";
-  version = "20170218";
+  name = "inspectrum-unstable-2017-05-31";
 
   src = fetchFromGitHub {
     owner = "miek";
     repo = "inspectrum";
-    rev = "d8d1969a4cceeee0ebfd2f39e791fddd5155d4de";
-    sha256 = "05sarfin9wqkvgwn3fil1r4bay03cwzzhjwbdjslibc5chdrr2cn";
+    rev = "a89d1337efb31673ccb6a6681bb89c21894c76f7";
+    sha256 = "1fvnr8gca25i6s9mg9b2hyqs0zzr4jicw13mimc9dhrgxklrr1yv";
   };
 
   buildInputs = [

pkgs/applications/networking/instant-messengers/qtox/default.nix

@@ -6,13 +6,13 @@
 
 stdenv.mkDerivation rec {
   name = "qtox-${version}";
-  version = "1.10.1";
+  version = "1.10.2";
 
   src = fetchFromGitHub {
     owner  = "tux3";
     repo   = "qTox";
     rev    = "v${version}";
-    sha256 = "1c5y7fwhsq1f6z8208xl1jd6bl1r6k8g0fjqxf0z10373c9395jq";
+    sha256 = "0c2633rc9l73q9qs9hybn11hmlqbwsvih3sf6jk1jp4151k5wp1y";
   };
 
   buildInputs = [

pkgs/applications/networking/instant-messengers/skypeforlinux/default.nix

@@ -4,7 +4,7 @@
 
 let
 
-  version = "5.2.0.1";
+  version = "5.3.0.1";
 
   rpath = stdenv.lib.makeLibraryPath [
     alsaLib
@@ -24,7 +24,7 @@ let
     gnome2.pango
 
     gnome2.gnome_keyring
-    
+
     libnotify
     nspr
     nss
@@ -49,8 +49,8 @@ let
   src =
     if stdenv.system == "x86_64-linux" then
       fetchurl {
-        url = "https://repo.skype.com/deb/pool/main/s/skypeforlinux/skypeforlinux_5.2.0.1_amd64.deb";
-        sha256 = "1dwyj5wm2amkysbnzxsskq6sl7rbqggm6n4sabnq7wd5xnbq4i06";
+        url = "https://repo.skype.com/deb/pool/main/s/skypeforlinux/skypeforlinux_${version}_amd64.deb";
+        sha256 = "08sf9nqnznsydw4965w7ixwwba54hjc02ga7vcnz9vpx5hln3nrz";
       }
     else
       throw "Skype for linux is not supported on ${stdenv.system}";

pkgs/applications/networking/instant-messengers/slack/default.nix

@@ -1,10 +1,10 @@
 { stdenv, fetchurl, dpkg
-, alsaLib, atk, cairo, cups, curl, dbus, expat, fontconfig, freetype, glib, gnome2
-, libnotify, nspr, nss, systemd, xorg }:
+, alsaLib, atk, cairo, cups, curl, dbus, expat, fontconfig, freetype, glib
+, gnome2, libnotify, libxcb, nspr, nss, systemd, xorg }:
 
 let
 
-  version = "2.5.2";
+  version = "2.6.2";
 
   rpath = stdenv.lib.makeLibraryPath [
     alsaLib
@@ -22,6 +22,7 @@ let
     gnome2.gtk
     gnome2.pango
     libnotify
+    libxcb
     nspr
     nss
     stdenv.cc.cc
@@ -45,7 +46,7 @@ let
     if stdenv.system == "x86_64-linux" then
       fetchurl {
         url = "https://downloads.slack-edge.com/linux_releases/slack-desktop-${version}-amd64.deb";
-        sha256 = "0mg8js18lnnwyvqksrhpym7d04bin16bh7sdmxbm36iijb9ajxmi";
+        sha256 = "01zdzzpnv8qpmcpy6h9x7izrnwm0y015j5p5rnjwx8ki712wnmm8";
       }
     else
       throw "Slack is not supported on ${stdenv.system}";

pkgs/applications/networking/insync/default.nix

@@ -3,10 +3,14 @@
 stdenv.mkDerivation rec {
   name = "insync-${version}";
   version = "1.3.16.36155";
-  src = fetchurl {
-    url = "http://s.insynchq.com/builds/insync-portable_${version}_amd64.tar.bz2";
-    sha256 = "1gf1qg7mkbcgqhwxkiljmd1w2zvarq6vhxhips3w06bqdyg12210";
-  };
+  src =
+    if stdenv.system == "x86_64-linux" then
+      fetchurl {
+        url = "http://s.insynchq.com/builds/insync-portable_${version}_amd64.tar.bz2";
+        sha256 = "1gf1qg7mkbcgqhwxkiljmd1w2zvarq6vhxhips3w06bqdyg12210";
+      }
+    else
+      throw "${name} is not supported on ${stdenv.system}";
 
   buildInputs = [ makeWrapper ];
 

pkgs/applications/networking/mailreaders/neomutt/default.nix

@@ -1,21 +1,29 @@
 { stdenv, fetchFromGitHub, which, autoreconfHook, ncurses, perl
-, cyrus_sasl, gdbm, gpgme, kerberos, libidn, notmuch, openssl, lmdb }:
+, cyrus_sasl, gdbm, gpgme, kerberos, libidn, notmuch, openssl, lmdb, libxslt, docbook_xsl }:
 
 stdenv.mkDerivation rec {
-  version = "20170428";
+  version = "20170602";
   name = "neomutt-${version}";
 
   src = fetchFromGitHub {
     owner  = "neomutt";
     repo   = "neomutt";
     rev    = "neomutt-${version}";
-    sha256 = "1p6214agfv9plskkzalh03r5naiiyg1habrnknnjgck3nypb78ik";
+    sha256 = "0rpvxmv10ypl7la4nmp0s02ixmm9g5pn9g9ms8ygzsix9pa86w45";
   };
 
-  nativeBuildInputs = [ which autoreconfHook ];
-  buildInputs =
-    [ cyrus_sasl gdbm gpgme kerberos libidn ncurses
-      notmuch openssl perl lmdb ];
+  nativeBuildInputs = [ autoreconfHook docbook_xsl libxslt.bin which ];
+  buildInputs = [
+    cyrus_sasl gdbm gpgme kerberos libidn ncurses
+    notmuch openssl perl lmdb
+  ];
+
+  postPatch = ''
+    for f in doc/*.xsl ; do
+      substituteInPlace $f \
+        --replace http://docbook.sourceforge.net/release/xsl/current ${docbook_xsl}/share/xml/docbook-xsl
+    done
+  '';
 
   configureFlags = [
     "--enable-debug"
@@ -46,6 +54,8 @@ stdenv.mkDerivation rec {
 
   configureScript = "./prepare";
 
+  enableParallelBuilding = true;
+
   meta = with stdenv.lib; {
     description = "A small but very powerful text-based mail client";
     homepage = http://www.neomutt.org;

pkgs/applications/networking/resilio-sync/default.nix

@@ -0,0 +1,39 @@
+{ stdenv, fetchurl, ... }:
+
+let
+  arch = {
+    "x86_64-linux" = "x64";
+    "i686-linux" = "i386";
+  }.${stdenv.system};
+  libPath = stdenv.lib.makeLibraryPath [ stdenv.cc.libc ];
+
+in stdenv.mkDerivation rec {
+  name = "resilio-sync-${version}";
+  version = "2.5.2";
+
+  src = fetchurl {
+    url = "https://download-cdn.resilio.com/${version}/linux-${arch}/resilio-sync_${arch}.tar.gz";
+    sha256 = {
+      "x86_64-linux" = "15gji5zqs1py92bpwvvq0r1spl0yynbrsnh4ajphwq17bqys3192";
+      "i686-linux"   = "1y67bd63b95va7g2676rgp2clvcy09pnmivy00r2w46y7kwwwbj8";
+    }.${stdenv.system};
+  };
+
+  dontStrip = true; # Don't strip, otherwise patching the rpaths breaks
+  sourceRoot = ".";
+
+  installPhase = ''
+    install -D rslsync "$out/bin/rslsync"
+    patchelf \
+      --interpreter "$(< $NIX_CC/nix-support/dynamic-linker)" \
+      --set-rpath ${libPath} "$out/bin/rslsync"
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Automatically sync files via secure, distributed technology";
+    homepage    = https://www.resilio.com/;
+    license     = licenses.unfreeRedistributable;
+    platforms   = platforms.linux;
+    maintainers = with maintainers; [ domenkozar thoughtpolice cwoac ];
+  };
+}

pkgs/applications/science/chemistry/pymol/default.nix

@@ -1,24 +1,50 @@
-{ stdenv, fetchurl, python27Packages, glew, freeglut, libpng, libxml2, tk, freetype }:
+{ stdenv, fetchurl, makeDesktopItem
+, python3, python3Packages
+, glew, freeglut, libpng, libxml2, tk, freetype }:
+
+
+with stdenv.lib;
 
 let
-  version = "1.8.4.0";
+  pname = "pymol";
+  ver_maj = "1.8";
+  ver_min = "4";
+  version = "${ver_maj}.${ver_min}.0";
+  description = "A Python-enhanced molecular graphics tool";
+
+  desktopItem = makeDesktopItem {
+    name = "${pname}";
+    exec = "${pname}";
+    desktopName = "PyMol Molecular Graphics System";
+    genericName = "Molecular Modeller";
+    comment = description;
+    mimeType = "chemical/x-pdb;chemical/x-mdl-molfile;chemical/x-mol2;chemical/seq-aa-fasta;chemical/seq-na-fasta;chemical/x-xyz;chemical/x-mdl-sdf;";
+    categories = "Graphics;Education;Science;Chemistry;";
+  };
 in
-python27Packages.buildPythonApplication {
+python3Packages.buildPythonApplication {
   name = "pymol-${version}";
   src = fetchurl {
-    url = "mirror://sourceforge/project/pymol/pymol/1.8/pymol-v1.8.4.0.tar.bz2";
+    url = "mirror://sourceforge/project/pymol/pymol/${ver_maj}/pymol-v${version}.tar.bz2";
     sha256 = "0yfj8g5yic9zz6f0bw2n8h6ifvgsn8qvhq84alixsi28wzppn55n";
   };
 
-  buildInputs = [ python27Packages.numpy glew freeglut libpng libxml2 tk freetype ];
+  buildInputs = [ python3Packages.numpy glew freeglut libpng libxml2 tk freetype ];
   NIX_CFLAGS_COMPILE = "-I ${libxml2.dev}/include/libxml2";
 
   installPhase = ''
     python setup.py install --home=$out
+    cp -r ${desktopItem}/share/ $out/
+    runHook postInstall
   '';
 
-  meta = with stdenv.lib; {
-    description = "A Python-enhanced molecular graphics tool";
+  postInstall = with python3Packages; ''
+    wrapProgram $out/bin/pymol \
+      --prefix PYTHONPATH : ${makeSearchPathOutput "lib" python3.sitePackages [ Pmw tkinter ]}
+  '';
+
+  meta = {
+    description = description;
     homepage = "https://www.pymol.org/";
     license = licenses.psfl;
   };

pkgs/applications/version-management/gitkraken/default.nix

@@ -9,11 +9,11 @@ with stdenv.lib;
 
 stdenv.mkDerivation rec {
   name = "gitkraken-${version}";
-  version = "2.5.0";
+  version = "2.6.0";
 
   src = fetchurl {
     url = "https://release.gitkraken.com/linux/v${version}.deb";
-    sha256 = "1in8caxsc8fld1sl6d9nzch86s9x0770qi6amh573zmb80yyd743";
+    sha256 = "1msdwqp20pwaxv1a6maqb7wmaq00m8jpdga7fmbjcnpvkcdz49l7";
   };
 
   libPath = makeLibraryPath [

pkgs/applications/window-managers/i3/lock-color.nix

@@ -2,14 +2,14 @@
 , xcbutilimage, pam, libX11, libev, cairo, libxkbcommon, libxkbfile }:
 
 stdenv.mkDerivation rec {
-  version = "2.7-2017-04-01";
+  version = "2.9.1-c";
   name = "i3lock-color-${version}";
 
   src = fetchFromGitHub {
     owner = "chrjguill";
     repo = "i3lock-color";
-    rev = "61f6428aedbe4829d3e0f51d137283c8aec1e206";
-    sha256 = "0h4nzx46kcsp6b1i2lm9y4d1w1icrpvjl8g1h3wbpa5x4crh4703";
+    rev = version;
+    sha256 = "0qnw71qbppgp3ywj1k07av7wkl9syfb8j6izrkhj143q2ks4rkvl";
   };
   nativeBuildInputs = [ pkgconfig ];
   buildInputs = [ which libxcb xcbutilkeysyms xcbutilimage pam libX11

pkgs/build-support/emacs/elpa2nix.el

@@ -28,3 +28,6 @@ The file can either be a tar file or an Emacs Lisp file."
         (insert-file-contents file))
       (when is-tar (tar-mode))
       (elpa2nix-install-from-buffer))))
+
+;; Allow installing package tarfiles larger than 10MB
+(setq large-file-warning-threshold nil)

pkgs/build-support/fetchdarcs/default.nix

@@ -7,7 +7,7 @@ if md5 != "" then
 else
 stdenv.mkDerivation {
   name = "fetchdarcs";
-  SSL_CERT_FILE = "${cacert}/etc/ssl/certs/ca-bundle.crt";
+  NIX_SSL_CERT_FILE = "${cacert}/etc/ssl/certs/ca-bundle.crt";
   builder = ./builder.sh;
   buildInputs = [darcs];
 

pkgs/build-support/fetchgit/builder.sh

@@ -12,4 +12,5 @@ $SHELL $fetcher --builder --url "$url" --out "$out" --rev "$rev" \
   ${fetchSubmodules:+--fetch-submodules} \
   ${branchName:+--branch-name "$branchName"}
 
+runHook postFetch
 stopNest

pkgs/build-support/fetchgit/default.nix

@@ -15,6 +15,9 @@ in
 , fetchSubmodules ? true, deepClone ? false
 , branchName ? null
 , name ? urlToName url rev
+, # Shell code executed after the file has been fetched
+  # successfully. This can do things like check or transform the file.
+  postFetch ? ""
 }:
 
 /* NOTE:
@@ -54,7 +57,7 @@ stdenv.mkDerivation {
   outputHashMode = "recursive";
   outputHash = sha256;
 
-  inherit url rev leaveDotGit fetchSubmodules deepClone branchName;
+  inherit url rev leaveDotGit fetchSubmodules deepClone branchName postFetch;
 
   GIT_SSL_CAINFO = "${cacert}/etc/ssl/certs/ca-bundle.crt";
 

pkgs/data/fonts/iosevka/default.nix

@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   name = "iosevka-${version}";
-  version = "1.12.5";
+  version = "1.13.0";
 
   buildInputs = [ unzip ];
 
   src = fetchurl {
     url = "https://github.com/be5invis/Iosevka/releases/download/v${version}/iosevka-pack-${version}.zip";
-    sha256 = "0s3g6mk0ngwsrw9h9dqinb50cd9i8zhqdcmmh93fhyf4d87yfwyi";
+    sha256 = "03jc8a10177wk35gyp0n317azakyy5qzc6vbh331552asawckswr";
   };
 
   sourceRoot = ".";

pkgs/data/sgml+xml/stylesheets/xslt/docbook-xsl/default.nix

@@ -1,4 +1,4 @@
-{ lib, stdenv, fetchurl }:
+{ lib, stdenv, fetchurl, ruby }:
 
 let
 
@@ -10,6 +10,8 @@ let
       inherit sha256;
     };
 
+    buildInputs = [ ruby ];
+
     dontBuild = true;
 
     installPhase = ''
@@ -21,6 +23,9 @@ let
       # Backwards compatibility. Will remove eventually.
       mkdir -p $out/xml/xsl
       ln -s $dst $out/xml/xsl/docbook
+
+      ln -sv $dst/epub/bin $out
+      chmod +x $out/bin/dbtoepub
     '';
 
     meta = {

pkgs/desktops/gnome-3/3.22/core/gnome-backgrounds/default.nix

@@ -6,7 +6,7 @@ stdenv.mkDerivation rec {
   nativeBuildInputs = [ pkgconfig intltool ];
 
   meta = with stdenv.lib; {
-    platforms = platforms.linux;
+    platforms = platforms.unix;
     maintainers = gnome3.maintainers;
   };
 }

pkgs/development/compilers/binaryen/default.nix

@@ -0,0 +1,24 @@
+{ stdenv, cmake, fetchFromGitHub }:
+
+stdenv.mkDerivation rec {
+  version = "32";
+  rev = "version_${version}";
+  name = "binaryen-${version}";
+
+  src = fetchFromGitHub {
+    owner = "WebAssembly";
+    repo = "binaryen";
+    sha256 = "0zclw6pa2pkzrnp8ib9qwbjvq38r2h5ynfg8fjl99b5lcyz5m590";
+    inherit rev;
+  };
+
+  nativeBuildInputs = [ cmake ];
+
+  meta = with stdenv.lib; {
+    homepage = https://github.com/WebAssembly/binaryen;
+    description = "Compiler infrastructure and toolchain library for WebAssembly, in C++";
+    platforms = platforms.all;
+    maintainers = with maintainers; [ asppsa ];
+    license = licenses.asl20;
+  };
+}

pkgs/development/compilers/emscripten/default.nix

@@ -1,4 +1,6 @@
-{ stdenv, fetchFromGitHub, emscriptenfastcomp, python, nodejs, closurecompiler, jre }:
+{ stdenv, fetchFromGitHub, emscriptenfastcomp, python, nodejs, closurecompiler
+, jre, binaryen, enableWasm ? true
+}:
 
 let
   rev = "1.37.10";
@@ -36,6 +38,9 @@ stdenv.mkDerivation {
     echo "COMPILER_ENGINE = NODE_JS" >> $out/${appdir}/config
     echo "CLOSURE_COMPILER = '${closurecompiler}/share/java/closure-compiler-v${closurecompiler.version}.jar'" >> $out/${appdir}/config
     echo "JAVA = '${jre}/bin/java'" >> $out/${appdir}/config
+  ''
+  + stdenv.lib.optionalString enableWasm ''
+    echo "BINARYEN_ROOT = '${binaryen}'" >> $out/share/emscripten/config
   '';
 
   meta = with stdenv.lib; {

pkgs/development/compilers/gambit/default.nix

@@ -1,16 +1,25 @@
-{ stdenv, fetchurl }:
+{ stdenv, fetchurl, openssl }:
 
 stdenv.mkDerivation rec {
   name    = "gambit-${version}";
-  version = "4.8.5";
-  devver  = "4_8_5";
+  version = "4.8.6";
+  devver  = "4_8_6";
 
   src = fetchurl {
     url    = "http://www.iro.umontreal.ca/~gambit/download/gambit/v4.8/source/gambit-v${devver}-devel.tgz";
-    sha256 = "02b5bm06k2qr0lvdwwsl0ygxs7n8410rrkq95picn4s02kxszqnq";
+    sha256 = "0j3ka76cfb007rlcc3nv5p1s6vh31cwp87hwwabawf16vs1jb7bl";
   };
 
-  configureFlags = [ "--enable-shared" "--enable-single-host" ];
+  configureFlags = [
+    "--enable-single-host"
+    "--enable-shared"
+    "--enable-absolute-shared-libs"
+    "--enable-c-opt=-O6" "--enable-gcc-opts" "--enable-inline-jumps"
+    "--enable-thread-system=posix" "--enable-dynamic-tls"
+    "--enable-openssl"
+  ];
+
+  buildInputs = [ openssl ];
 
   meta = {
     description = "Optimizing Scheme to C compiler";

pkgs/development/compilers/gcc/7/default.nix

@@ -0,0 +1,551 @@
+{ stdenv, fetchurl, noSysDirs
+, langC ? true, langCC ? true, langFortran ? false
+, langObjC ? stdenv.isDarwin
+, langObjCpp ? stdenv.isDarwin
+, langJava ? false
+, langAda ? false
+, langVhdl ? false
+, langGo ? false
+, profiledCompiler ? false
+, staticCompiler ? false
+, enableShared ? true
+, texinfo ? null
+, perl ? null # optional, for texi2pod (then pod2man); required for Java
+, gmp, mpfr, libmpc, gettext, which
+, libelf                      # optional, for link-time optimizations (LTO)
+, isl ? null # optional, for the Graphite optimization framework.
+, zlib ? null, boehmgc ? null
+, zip ? null, unzip ? null, pkgconfig ? null
+, gtk2 ? null, libart_lgpl ? null
+, libX11 ? null, libXt ? null, libSM ? null, libICE ? null, libXtst ? null
+, libXrender ? null, xproto ? null, renderproto ? null, xextproto ? null
+, libXrandr ? null, libXi ? null, inputproto ? null, randrproto ? null
+, x11Support ? langJava
+, gnatboot ? null
+, enableMultilib ? false
+, enablePlugin ? true             # whether to support user-supplied plug-ins
+, name ? "gcc"
+, cross ? null
+, libcCross ? null
+, crossStageStatic ? true
+, gnat ? null
+, libpthread ? null, libpthreadCross ? null  # required for GNU/Hurd
+, stripped ? true
+, gnused ? null
+, binutils ? null
+, cloog # unused; just for compat with gcc4, as we override the parameter on some places
+, darwin ? null
+, flex ? null
+, buildPlatform, hostPlatform, targetPlatform
+}:
+
+assert langJava     -> zip != null && unzip != null
+                       && zlib != null && boehmgc != null
+                       && perl != null;  # for `--enable-java-home'
+assert langAda      -> gnatboot != null;
+assert langVhdl     -> gnat != null;
+
+# LTO needs libelf and zlib.
+assert libelf != null -> zlib != null;
+
+# Make sure we get GNU sed.
+assert stdenv.isDarwin -> gnused != null;
+
+# Need c++filt on darwin
+assert stdenv.isDarwin -> binutils != null;
+
+# The go frontend is written in c++
+assert langGo -> langCC;
+
+with stdenv.lib;
+with builtins;
+
+let version = "7.1.0";
+
+    # Whether building a cross-compiler for GNU/Hurd.
+    crossGNU = cross != null && cross.config == "i586-pc-gnu";
+
+    enableParallelBuilding = true;
+
+    patches =
+      [ ]
+      ++ optional (cross != null) ../libstdc++-target.patch
+      ++ optional noSysDirs ../no-sys-dirs.patch
+      # The GNAT Makefiles did not pay attention to CFLAGS_FOR_TARGET for its
+      # target libraries and tools.
+      ++ optional langAda ../gnat-cflags.patch
+      ++ optional langFortran ../gfortran-driving.patch;
+
+    javaEcj = fetchurl {
+      # The `$(top_srcdir)/ecj.jar' file is automatically picked up at
+      # `configure' time.
+
+      # XXX: Eventually we might want to take it from upstream.
+      url = "ftp://sourceware.org/pub/java/ecj-4.3.jar";
+      sha256 = "0jz7hvc0s6iydmhgh5h2m15yza7p2rlss2vkif30vm9y77m97qcx";
+    };
+
+    # Antlr (optional) allows the Java `gjdoc' tool to be built.  We want a
+    # binary distribution here to allow the whole chain to be bootstrapped.
+    javaAntlr = fetchurl {
+      url = http://www.antlr.org/download/antlr-4.4-complete.jar;
+      sha256 = "02lda2imivsvsis8rnzmbrbp8rh1kb8vmq4i67pqhkwz7lf8y6dz";
+    };
+
+    xlibs = [
+      libX11 libXt libSM libICE libXtst libXrender libXrandr libXi
+      xproto renderproto xextproto inputproto randrproto
+    ];
+
+    javaAwtGtk = langJava && x11Support;
+
+    /* Platform flags */
+    platformFlags = let
+        gccArch = stdenv.platform.gcc.arch or null;
+        gccCpu = stdenv.platform.gcc.cpu or null;
+        gccAbi = stdenv.platform.gcc.abi or null;
+        gccFpu = stdenv.platform.gcc.fpu or null;
+        gccFloat = stdenv.platform.gcc.float or null;
+        gccMode = stdenv.platform.gcc.mode or null;
+        withArch = if gccArch != null then " --with-arch=${gccArch}" else "";
+        withCpu = if gccCpu != null then " --with-cpu=${gccCpu}" else "";
+        withAbi = if gccAbi != null then " --with-abi=${gccAbi}" else "";
+        withFpu = if gccFpu != null then " --with-fpu=${gccFpu}" else "";
+        withFloat = if gccFloat != null then " --with-float=${gccFloat}" else "";
+        withMode = if gccMode != null then " --with-mode=${gccMode}" else "";
+      in
+        withArch +
+        withCpu +
+        withAbi +
+        withFpu +
+        withFloat +
+        withMode;
+
+    /* Cross-gcc settings */
+    crossMingw = cross != null && cross.libc == "msvcrt";
+    crossDarwin = cross != null && cross.libc == "libSystem";
+    crossConfigureFlags = let
+        gccArch = targetPlatform.gcc.arch or null;
+        gccCpu = targetPlatform.gcc.cpu or null;
+        gccAbi = targetPlatform.gcc.abi or null;
+        gccFpu = targetPlatform.gcc.fpu or null;
+        gccFloat = targetPlatform.gcc.float or null;
+        gccMode = targetPlatform.gcc.mode or null;
+        withArch = if gccArch != null then " --with-arch=${gccArch}" else "";
+        withCpu = if gccCpu != null then " --with-cpu=${gccCpu}" else "";
+        withAbi = if gccAbi != null then " --with-abi=${gccAbi}" else "";
+        withFpu = if gccFpu != null then " --with-fpu=${gccFpu}" else "";
+        withFloat = if gccFloat != null then " --with-float=${gccFloat}" else "";
+        withMode = if gccMode != null then " --with-mode=${gccMode}" else "";
+      in
+        "--target=${cross.config}" +
+        withArch +
+        withCpu +
+        withAbi +
+        withFpu +
+        withFloat +
+        withMode +
+        # Ensure that -print-prog-name is able to find the correct programs.
+        " --with-as=${binutils}/bin/${cross.config}-as" +
+        " --with-ld=${binutils}/bin/${cross.config}-ld" +
+        (if crossMingw && crossStageStatic then
+          " --with-headers=${libcCross}/include" +
+          " --with-gcc" +
+          " --with-gnu-as" +
+          " --with-gnu-ld" +
+          " --with-gnu-ld" +
+          " --disable-shared" +
+          " --disable-nls" +
+          " --disable-debug" +
+          " --enable-sjlj-exceptions" +
+          " --enable-threads=win32" +
+          " --disable-win32-registry"
+          else if crossStageStatic then
+          " --disable-libssp --disable-nls" +
+          " --without-headers" +
+          " --disable-threads " +
+          " --disable-libgomp " +
+          " --disable-libquadmath" +
+          " --disable-shared" +
+          " --disable-libatomic " +  # libatomic requires libc
+          " --disable-decimal-float" # libdecnumber requires libc
+          else
+          (if crossDarwin then " --with-sysroot=${getLib libcCross}/share/sysroot"
+           else                " --with-headers=${getDev libcCross}/include") +
+          # Ensure that -print-prog-name is able to find the correct programs.
+          " --enable-__cxa_atexit" +
+          " --enable-long-long" +
+          (if crossMingw then
+            " --enable-threads=win32" +
+            " --enable-sjlj-exceptions" +
+            " --enable-hash-synchronization" +
+            " --disable-libssp" +
+            " --disable-nls" +
+            " --with-dwarf2" +
+            # I think noone uses shared gcc libs in mingw, so we better do the same.
+            # In any case, mingw32 g++ linking is broken by default with shared libs,
+            # unless adding "-lsupc++" to any linking command. I don't know why.
+            " --disable-shared" +
+            # To keep ABI compatibility with upstream mingw-w64
+            " --enable-fully-dynamic-string"
+            else (if cross.libc == "uclibc" then
+              # libsanitizer requires netrom/netrom.h which is not
+              # available in uclibc.
+              " --disable-libsanitizer" +
+              # In uclibc cases, libgomp needs an additional '-ldl'
+              # and as I don't know how to pass it, I disable libgomp.
+              " --disable-libgomp" else "") +
+            " --enable-threads=posix" +
+            " --enable-nls" +
+            " --disable-decimal-float") # No final libdecnumber (it may work only in 386)
+          );
+    stageNameAddon = if crossStageStatic then "-stage-static" else "-stage-final";
+    crossNameAddon = if cross != null then "-${cross.config}" + stageNameAddon else "";
+
+  bootstrap = cross == null;
+
+in
+
+# We need all these X libraries when building AWT with GTK+.
+assert x11Support -> (filter (x: x == null) ([ gtk2 libart_lgpl ] ++ xlibs)) == [];
+
+stdenv.mkDerivation ({
+  name = "${name}${if stripped then "" else "-debug"}-${version}" + crossNameAddon;
+
+  builder = ../builder.sh;
+
+  src = fetchurl {
+    url = "mirror://gcc/releases/gcc-${version}/gcc-${version}.tar.bz2";
+    sha256 = "05xwps0ci7wgxh50askpa2r9p8518qxdgh6ad7pnyk7n6p13d0ca";
+  };
+
+  inherit patches;
+
+  outputs = [ "out" "lib" "man" "info" ];
+  setOutputFlags = false;
+  NIX_NO_SELF_RPATH = true;
+
+  libc_dev = stdenv.cc.libc_dev;
+
+  hardeningDisable = [ "format" ];
+
+  postPatch =
+    if (stdenv.isHurd
+        || (libcCross != null                  # e.g., building `gcc.crossDrv'
+            && libcCross ? crossConfig
+            && libcCross.crossConfig == "i586-pc-gnu")
+        || (crossGNU && libcCross != null))
+    then
+      # On GNU/Hurd glibc refers to Hurd & Mach headers and libpthread is not
+      # in glibc, so add the right `-I' flags to the default spec string.
+      assert libcCross != null -> libpthreadCross != null;
+      let
+        libc = if libcCross != null then libcCross else stdenv.glibc;
+        gnu_h = "gcc/config/gnu.h";
+        extraCPPDeps =
+             libc.propagatedBuildInputs
+          ++ stdenv.lib.optional (libpthreadCross != null) libpthreadCross
+          ++ stdenv.lib.optional (libpthread != null) libpthread;
+        extraCPPSpec =
+          concatStrings (intersperse " "
+                          (map (x: "-I${x.dev or x}/include") extraCPPDeps));
+        extraLibSpec =
+          if libpthreadCross != null
+          then "-L${libpthreadCross}/lib ${libpthreadCross.TARGET_LDFLAGS}"
+          else "-L${libpthread}/lib";
+      in
+        '' echo "augmenting \`CPP_SPEC' in \`${gnu_h}' with \`${extraCPPSpec}'..."
+           sed -i "${gnu_h}" \
+               -es'|CPP_SPEC *"\(.*\)$|CPP_SPEC "${extraCPPSpec} \1|g'
+
+           echo "augmenting \`LIB_SPEC' in \`${gnu_h}' with \`${extraLibSpec}'..."
+           sed -i "${gnu_h}" \
+               -es'|LIB_SPEC *"\(.*\)$|LIB_SPEC "${extraLibSpec} \1|g'
+
+           echo "setting \`NATIVE_SYSTEM_HEADER_DIR' and \`STANDARD_INCLUDE_DIR' to \`${libc.dev}/include'..."
+           sed -i "${gnu_h}" \
+               -es'|#define STANDARD_INCLUDE_DIR.*$|#define STANDARD_INCLUDE_DIR "${libc.dev}/include"|g'
+        ''
+    else if cross != null || stdenv.cc.libc != null then
+      # On NixOS, use the right path to the dynamic linker instead of
+      # `/lib/ld*.so'.
+      let
+        libc = if libcCross != null then libcCross else stdenv.cc.libc;
+      in
+        '' echo "fixing the \`GLIBC_DYNAMIC_LINKER' and \`UCLIBC_DYNAMIC_LINKER' macros..."
+           for header in "gcc/config/"*-gnu.h "gcc/config/"*"/"*.h
+           do
+             grep -q LIBC_DYNAMIC_LINKER "$header" || continue
+             echo "  fixing \`$header'..."
+             sed -i "$header" \
+                 -e 's|define[[:blank:]]*\([UCG]\+\)LIBC_DYNAMIC_LINKER\([0-9]*\)[[:blank:]]"\([^\"]\+\)"$|define \1LIBC_DYNAMIC_LINKER\2 "${libc.out}\3"|g'
+           done
+        ''
+    else null;
+
+  inherit noSysDirs staticCompiler langJava crossStageStatic
+    libcCross crossMingw;
+
+  nativeBuildInputs = [ texinfo which gettext ]
+    ++ (optional (perl != null) perl)
+    ++ (optional javaAwtGtk pkgconfig);
+
+  buildInputs = [ gmp mpfr libmpc libelf flex ]
+    ++ (optional (isl != null) isl)
+    ++ (optional (zlib != null) zlib)
+    ++ (optionals langJava [ boehmgc zip unzip ])
+    ++ (optionals javaAwtGtk ([ gtk2 libart_lgpl ] ++ xlibs))
+    ++ (optionals (cross != null) [binutils])
+    ++ (optionals langAda [gnatboot])
+    ++ (optionals langVhdl [gnat])
+
+    # The builder relies on GNU sed (for instance, Darwin's `sed' fails with
+    # "-i may not be used with stdin"), and `stdenvNative' doesn't provide it.
+    ++ (optional stdenv.isDarwin gnused)
+    ++ (optional stdenv.isDarwin binutils)
+    ;
+
+  NIX_LDFLAGS = stdenv.lib.optionalString  stdenv.isSunOS "-lm -ldl";
+
+  preConfigure = stdenv.lib.optionalString (stdenv.isSunOS && stdenv.is64bit) ''
+    export NIX_LDFLAGS=`echo $NIX_LDFLAGS | sed -e s~$prefix/lib~$prefix/lib/amd64~g`
+    export LDFLAGS_FOR_TARGET="-Wl,-rpath,$prefix/lib/amd64 $LDFLAGS_FOR_TARGET"
+    export CXXFLAGS_FOR_TARGET="-Wl,-rpath,$prefix/lib/amd64 $CXXFLAGS_FOR_TARGET"
+    export CFLAGS_FOR_TARGET="-Wl,-rpath,$prefix/lib/amd64 $CFLAGS_FOR_TARGET"
+  '';
+
+  dontDisableStatic = true;
+
+  configureFlags = "
+    ${if stdenv.isSunOS then
+      " --enable-long-long --enable-libssp --enable-threads=posix --disable-nls --enable-__cxa_atexit " +
+      # On Illumos/Solaris GNU as is preferred
+      " --with-gnu-as --without-gnu-ld "
+      else ""}
+    --enable-lto
+    ${if enableMultilib then "--enable-multilib --disable-libquadmath" else "--disable-multilib"}
+    ${if enableShared then "" else "--disable-shared"}
+    ${if enablePlugin then "--enable-plugin" else "--disable-plugin"}
+    ${optionalString (isl != null) "--with-isl=${isl}"}
+    ${if langJava then
+      "--with-ecj-jar=${javaEcj} " +
+
+      # Follow Sun's layout for the convenience of IcedTea/OpenJDK.  See
+      # <http://mail.openjdk.java.net/pipermail/distro-pkg-dev/2010-April/008888.html>.
+      "--enable-java-home --with-java-home=\${prefix}/lib/jvm/jre "
+      else ""}
+    ${if javaAwtGtk then "--enable-java-awt=gtk" else ""}
+    ${if langJava && javaAntlr != null then "--with-antlr-jar=${javaAntlr}" else ""}
+    --with-gmp-include=${gmp.dev}/include
+    --with-gmp-lib=${gmp.out}/lib
+    --with-mpfr-include=${mpfr.dev}/include
+    --with-mpfr-lib=${mpfr.out}/lib
+    --with-mpc=${libmpc}
+    ${if libelf != null then "--with-libelf=${libelf}" else ""}
+    --disable-libstdcxx-pch
+    --without-included-gettext
+    --with-system-zlib
+    --enable-static
+    --enable-languages=${
+      concatStrings (intersperse ","
+        (  optional langC        "c"
+        ++ optional langCC       "c++"
+        ++ optional langFortran  "fortran"
+        ++ optional langJava     "java"
+        ++ optional langAda      "ada"
+        ++ optional langVhdl     "vhdl"
+        ++ optional langGo       "go"
+        ++ optional langObjC     "objc"
+        ++ optional langObjCpp   "obj-c++"
+        ++ optionals crossDarwin [ "objc" "obj-c++" ]
+        )
+      )
+    }
+    ${if cross == null
+      then if stdenv.isDarwin
+        then " --with-native-system-header-dir=${darwin.usr-include}"
+        else " --with-native-system-header-dir=${getDev stdenv.cc.libc}/include"
+      else ""}
+    ${if langAda then " --enable-libada" else ""}
+    ${if cross == null && stdenv.isi686 then "--with-arch=i686" else ""}
+    ${if cross != null then crossConfigureFlags else ""}
+    ${if !bootstrap then "--disable-bootstrap" else ""}
+    ${if cross == null then platformFlags else ""}
+  ";
+
+  targetConfig = if cross != null then cross.config else null;
+
+  buildFlags = if bootstrap then
+    (if profiledCompiler then "profiledbootstrap" else "bootstrap")
+    else "";
+
+  installTargets =
+    if stripped
+    then "install-strip"
+    else "install";
+
+  crossAttrs = let
+    xgccArch = targetPlatform.gcc.arch or null;
+    xgccCpu = targetPlatform.gcc.cpu or null;
+    xgccAbi = targetPlatform.gcc.abi or null;
+    xgccFpu = targetPlatform.gcc.fpu or null;
+    xgccFloat = targetPlatform.gcc.float or null;
+    xwithArch = if xgccArch != null then " --with-arch=${xgccArch}" else "";
+    xwithCpu = if xgccCpu != null then " --with-cpu=${xgccCpu}" else "";
+    xwithAbi = if xgccAbi != null then " --with-abi=${xgccAbi}" else "";
+    xwithFpu = if xgccFpu != null then " --with-fpu=${xgccFpu}" else "";
+    xwithFloat = if xgccFloat != null then " --with-float=${xgccFloat}" else "";
+  in {
+    AR = "${targetPlatform.config}-ar";
+    LD = "${targetPlatform.config}-ld";
+    CC = "${targetPlatform.config}-gcc";
+    CXX = "${targetPlatform.config}-gcc";
+    AR_FOR_TARGET = "${targetPlatform.config}-ar";
+    LD_FOR_TARGET = "${targetPlatform.config}-ld";
+    CC_FOR_TARGET = "${targetPlatform.config}-gcc";
+    NM_FOR_TARGET = "${targetPlatform.config}-nm";
+    CXX_FOR_TARGET = "${targetPlatform.config}-g++";
+    # If we are making a cross compiler, cross != null
+    NIX_CC_CROSS = if cross == null then "${stdenv.ccCross}" else "";
+    dontStrip = true;
+    configureFlags = ''
+      ${if enableMultilib then "" else "--disable-multilib"}
+      ${if enableShared then "" else "--disable-shared"}
+      ${if langJava then "--with-ecj-jar=${javaEcj.crossDrv}" else ""}
+      ${if javaAwtGtk then "--enable-java-awt=gtk" else ""}
+      ${if langJava && javaAntlr != null then "--with-antlr-jar=${javaAntlr.crossDrv}" else ""}
+      --with-gmp=${gmp.crossDrv}
+      --with-mpfr=${mpfr.crossDrv}
+      --with-mpc=${libmpc.crossDrv}
+      --disable-libstdcxx-pch
+      --without-included-gettext
+      --with-system-zlib
+      --enable-languages=${
+        concatStrings (intersperse ","
+          (  optional langC        "c"
+          ++ optional langCC       "c++"
+          ++ optional langFortran  "fortran"
+          ++ optional langJava     "java"
+          ++ optional langAda      "ada"
+          ++ optional langVhdl     "vhdl"
+          ++ optional langGo       "go"
+          )
+        )
+      }
+      ${if langAda then " --enable-libada" else ""}
+      --target=${targetPlatform.config}
+      ${xwithArch}
+      ${xwithCpu}
+      ${xwithAbi}
+      ${xwithFpu}
+      ${xwithFloat}
+    '';
+    buildFlags = "";
+  };
+
+
+  # Needed for the cross compilation to work
+  AR = "ar";
+  LD = "ld";
+  # http://gcc.gnu.org/install/specific.html#x86-64-x-solaris210
+  CC = if stdenv.system == "x86_64-solaris" then "gcc -m64" else "gcc";
+
+  # Setting $CPATH and $LIBRARY_PATH to make sure both `gcc' and `xgcc' find
+  # the library headers and binaries, regarless of the language being
+  # compiled.
+
+  # Note: When building the Java AWT GTK+ peer, the build system doesn't
+  # honor `--with-gmp' et al., e.g., when building
+  # `libjava/classpath/native/jni/java-math/gnu_java_math_GMP.c', so we just
+  # add them to $CPATH and $LIBRARY_PATH in this case.
+  #
+  # Likewise, the LTO code doesn't find zlib.
+
+  CPATH = makeSearchPathOutput "dev" "include" ([]
+    ++ optional (zlib != null) zlib
+    ++ optional langJava boehmgc
+    ++ optionals javaAwtGtk xlibs
+    ++ optionals javaAwtGtk [ gmp mpfr ]
+    ++ optional (libpthread != null) libpthread
+    ++ optional (libpthreadCross != null) libpthreadCross
+
+    # On GNU/Hurd glibc refers to Mach & Hurd
+    # headers.
+    ++ optionals (libcCross != null && libcCross ? "propagatedBuildInputs")
+                 libcCross.propagatedBuildInputs);
+
+  LIBRARY_PATH = makeLibraryPath ([]
+    ++ optional (zlib != null) zlib
+    ++ optional langJava boehmgc
+    ++ optionals javaAwtGtk xlibs
+    ++ optionals javaAwtGtk [ gmp mpfr ]
+    ++ optional (libpthread != null) libpthread);
+
+  EXTRA_TARGET_CFLAGS =
+    if cross != null && libcCross != null then [
+        "-idirafter ${getDev libcCross}/include"
+      ]
+      ++ optionals (! crossStageStatic) [
+        "-B${libcCross.out}/lib"
+      ]
+    else null;
+
+  EXTRA_TARGET_LDFLAGS =
+    if cross != null && libcCross != null then [
+        "-Wl,-L${libcCross.out}/lib"
+      ]
+      ++ (if crossStageStatic then [
+        "-B${libcCross.out}/lib"
+      ] else [
+        "-Wl,-rpath,${libcCross.out}/lib"
+        "-Wl,-rpath-link,${libcCross.out}/lib"
+      ])
+      ++ optionals (libpthreadCross != null) [
+        "-L${libpthreadCross}/lib"
+        "-Wl,${libpthreadCross.TARGET_LDFLAGS}"
+      ]
+    else null;
+
+  passthru =
+    { inherit langC langCC langObjC langObjCpp langAda langFortran langVhdl langGo version; isGNU = true; };
+
+  inherit enableParallelBuilding enableMultilib;
+
+  inherit (stdenv) is64bit;
+
+  meta = {
+    homepage = http://gcc.gnu.org/;
+    license = stdenv.lib.licenses.gpl3Plus;  # runtime support libraries are typically LGPLv3+
+    description = "GNU Compiler Collection, version ${version}"
+      + (if stripped then "" else " (with debugging info)");
+
+    longDescription = ''
+      The GNU Compiler Collection includes compiler front ends for C, C++,
+      Objective-C, Fortran, OpenMP for C/C++/Fortran, Java, and Ada, as well
+      as libraries for these languages (libstdc++, libgcj, libgomp,...).
+
+      GCC development is a part of the GNU Project, aiming to improve the
+      compiler used in the GNU system including the GNU/Linux variant.
+    '';
+
+    maintainers = with stdenv.lib.maintainers; [ ];
+
+    # gnatboot is not available out of linux platforms, so we disable the darwin build
+    # for the gnat (ada compiler).
+    platforms =
+      stdenv.lib.platforms.linux ++
+      stdenv.lib.platforms.freebsd ++
+      optionals (langAda == false) stdenv.lib.platforms.darwin;
+  };
+}
+
+// optionalAttrs (cross != null && cross.libc == "msvcrt" && crossStageStatic) {
+  makeFlags = [ "all-gcc" "all-target-libgcc" ];
+  installTargets = "install-gcc install-target-libgcc";
+}
+
+# Strip kills static libs of other archs (hence cross != null)
+// optionalAttrs (!stripped || cross != null) { dontStrip = true; NIX_STRIP_DEBUG = 0; }
+
+// optionalAttrs (enableMultilib) { dontMoveLib64 = true; }
+)

pkgs/development/compilers/gerbil/default.nix

@@ -0,0 +1,55 @@
+{ stdenv, fetchurl, fetchgit, gambit, openssl, zlib, coreutils, rsync, bash }:
+
+stdenv.mkDerivation rec {
+  name    = "gerbil-${version}";
+
+  version = "0.10";
+  src = fetchurl {
+    url    = "https://github.com/vyzo/gerbil/archive/v${version}.tar.gz";
+    sha256 = "14wzdnifr99g1mvm2xwks97nhaq62hfx43pxcw9gs647i7cymbly";
+  };
+
+  buildInputs = [ gambit openssl zlib coreutils rsync bash ];
+
+  postPatch = ''
+    patchShebangs .
+
+    find . -type f -executable -print0 | while IFS= read -r -d ''$'\0' f; do
+      substituteInPlace "$f" --replace '#!/usr/bin/env' '#!${coreutils}/bin/env'
+    done
+  '';
+
+  buildPhase = ''
+    runHook preBuild
+    ( cd src && sh build.sh )
+    runHook postBuild
+  '';
+
+  installPhase = ''
+    runHook preInstall
+    mkdir -p $out/
+    cp -fa bin lib etc doc $out/
+
+    cat > $out/bin/gxi <<EOF
+#!${bash}/bin/bash -e
+export GERBIL_HOME=$out
+case "\$1" in -:*) GSIOPTIONS=\$1 ; shift ;; esac
+if [[ \$# = 0 ]] ; then
+  ${gambit}/bin/gsi \$GSIOPTIONS \$GERBIL_HOME/lib/gxi-init \$GERBIL_HOME/lib/gxi-interactive - ;
+else
+  ${gambit}/bin/gsi \$GSIOPTIONS \$GERBIL_HOME/lib/gxi-init "\$@"
+fi
+EOF
+    runHook postInstall
+  '';
+
+  dontStrip = true;
+
+  meta = {
+    description = "Gerbil";
+    homepage    = "https://github.com/vyzo/gerbil";
+    license     = stdenv.lib.licenses.lgpl2;
+    platforms   = stdenv.lib.platforms.linux;
+    maintainers = with stdenv.lib.maintainers; [ fare ];
+  };
+}

pkgs/development/compilers/llvm/4/lldb.nix

@@ -32,17 +32,21 @@ stdenv.mkDerivation {
 
   nativeBuildInputs = [ cmake python which swig ];
   buildInputs = [ ncurses zlib libedit libxml2 llvm ]
-    ++ stdenv.lib.optionals stdenv.isDarwin [ darwin.libobjc darwin.apple_sdk.libs.xpc ];
+    ++ stdenv.lib.optionals stdenv.isDarwin [ darwin.libobjc darwin.apple_sdk.libs.xpc darwin.apple_sdk.frameworks.Foundation darwin.bootstrap_cmds darwin.apple_sdk.frameworks.Carbon darwin.apple_sdk.frameworks.Cocoa ];
 
   CXXFLAGS = "-fno-rtti";
   hardeningDisable = [ "format" ];
 
+  cmakeFlags = [
+    "-DLLDB_CODESIGN_IDENTITY=" # codesigning makes nondeterministic
+  ];
+
   enableParallelBuilding = true;
 
   meta = with stdenv.lib; {
     description = "A next-generation high-performance debugger";
     homepage    = http://llvm.org/;
     license     = licenses.ncsa;
-    platforms   = platforms.allBut platforms.darwin;
+    platforms   = platforms.all;
   };
 }

pkgs/development/interpreters/php/default.nix

@@ -274,9 +274,10 @@ let
 
         #[[ -z "$libxml2" ]] || addToSearchPath PATH $libxml2/bin
 
+        export EXTENSION_DIR=$out/lib/php/extensions
+
         configureFlags+=(--with-config-file-path=$out/etc \
-          --includedir=$dev/include \
-          EXTENSION_DIR=$out/lib/php/extensions)
+          --includedir=$dev/include)
       '';
 
       configureFlags = [

pkgs/development/interpreters/racket/default.nix

@@ -33,11 +33,11 @@ in
 
 stdenv.mkDerivation rec {
   name = "racket-${version}";
-  version = "6.8";
+  version = "6.9";
 
   src = fetchurl {
     url = "http://mirror.racket-lang.org/installers/${version}/${name}-src.tgz";
-    sha256 = "1l9z1a0r5zydr50cklx9xjw3l0pwnf64i10xq7112fl1r89q3qgv";
+    sha256 = "1cd218ee2ba1dc683de858a866c6666eb72a11adee8d1df6cdd59c5c5a47b714";
   };
 
   FONTCONFIG_FILE = fontsConf;

pkgs/development/libraries/half/default.nix

@@ -0,0 +1,25 @@
+{ stdenv, fetchzip }:
+
+stdenv.mkDerivation rec {
+  version = "1.12.0";
+  name = "half-${version}";
+
+  src = fetchzip {
+    url = "mirror://sourceforge/half/${version}/half-${version}.zip";
+    sha256 = "0096xiw8nj86vxnn3lfcl94vk9qbi5i8lnydri9ws358ly6002vc";
+    stripRoot = false;
+  };
+
+  buildCommand = ''
+    mkdir -p $out/include $out/share/doc
+    cp $src/include/half.hpp               $out/include/
+    cp $src/{ChangeLog,LICENSE,README}.txt $out/share/doc/
+  '';
+
+  meta = with stdenv.lib; {
+    description = "C++ library for half precision floating point arithmetics";
+    platforms = platforms.all;
+    license = licenses.mit;
+    maintainers = [ maintainers.volth ];
+  };
+}

pkgs/development/libraries/libmnl/default.nix

@@ -18,7 +18,7 @@ stdenv.mkDerivation rec {
       re-inventing the wheel.
     '';
     homepage = http://netfilter.org/projects/libmnl/index.html;
-    license = stdenv.lib.licenses.gpl2Plus;
+    license = stdenv.lib.licenses.lgpl21Plus;
 
     platforms = stdenv.lib.platforms.linux;
   };

pkgs/development/libraries/libnetfilter_log/default.nix

@@ -0,0 +1,29 @@
+{ stdenv, fetchurl, pkgconfig, libnfnetlink, libmnl }:
+
+stdenv.mkDerivation rec {
+  name = "libnetfilter_log-${version}";
+  version = "1.0.1";
+
+  src = fetchurl {
+    url = "http://netfilter.org/projects/libnetfilter_log/files/${name}.tar.bz2";
+    sha256 = "089vjcfxl5qjqpswrbgklf4wflh44irmw6sk2k0kmfixfmszxq3l";
+  };
+
+  buildInputs = [ libmnl ];
+  propagatedBuildInputs = [ libnfnetlink ];
+  nativeBuildInputs = [ pkgconfig ];
+
+  meta = with stdenv.lib; {
+    description = "Userspace library providing interface to packets that have been logged by the kernel packet filter";
+    longDescription = ''
+      libnetfilter_log is a userspace library providing interface to packets
+      that have been logged by the kernel packet filter. It is is part of a
+      system that deprecates the old syslog/dmesg based packet logging. This
+      library has been previously known as libnfnetlink_log.
+    '';
+    homepage = http://netfilter.org/projects/libnetfilter_log/;
+    license = licenses.gpl2Plus;
+    platforms = platforms.linux;
+    maintainers = with maintainers; [ orivej nckx ];
+  };
+}

pkgs/development/libraries/libressl/2.5.nix

@@ -13,6 +13,8 @@ stdenv.mkDerivation rec {
 
   outputs = [ "bin" "dev" "out" "man" ];
 
+  dontGzipMan = if stdenv.isDarwin then true else null; # not sure what's wrong
+
   meta = with stdenv.lib; {
     description = "Free TLS/SSL implementation";
     homepage    = "http://www.libressl.org";

pkgs/development/libraries/libvirt/default.nix

@@ -24,10 +24,10 @@ stdenv.mkDerivation rec {
   nativeBuildInputs = [ makeWrapper pkgconfig ];
   buildInputs = [
     libxml2 gnutls perl python2 readline gettext libtasn1 libgcrypt yajl
-    attr libxslt xhtml1 perlPackages.XMLXPath curl libpcap parted
+    libxslt xhtml1 perlPackages.XMLXPath curl libpcap
   ] ++ optionals stdenv.isLinux [
     libpciaccess devicemapper lvm2 utillinux systemd libnl numad zfs
-    libapparmor libcap_ng numactl xen
+    libapparmor libcap_ng numactl xen attr parted
   ] ++ optionals stdenv.isDarwin [
      libiconv gmp
   ];
@@ -50,7 +50,6 @@ stdenv.mkDerivation rec {
     "--with-test"
     "--with-esx"
     "--with-remote"
-    "--with-storage-disk"
   ] ++ optionals stdenv.isLinux [
     "--with-attr"
     "--with-apparmor"
@@ -59,6 +58,7 @@ stdenv.mkDerivation rec {
     "--with-macvtap"
     "--with-virtualport"
     "--with-init-script=systemd+redhat"
+    "--with-storage-disk"
     "--with-storage-zfs"
   ] ++ optionals stdenv.isDarwin [
     "--with-init-script=none"
@@ -74,8 +74,8 @@ stdenv.mkDerivation rec {
     substituteInPlace $out/libexec/libvirt-guests.sh \
       --replace "$out/bin" "${gettext}/bin" \
       --replace "lock/subsys" "lock"
-    rm $out/lib/systemd/system/{virtlockd,virtlogd}.*
   '' + optionalString stdenv.isLinux ''
+    rm $out/lib/systemd/system/{virtlockd,virtlogd}.*
     wrapProgram $out/sbin/libvirtd \
       --prefix PATH : ${makeBinPath [ iptables iproute pmutils numad numactl ]}
   '';

pkgs/development/libraries/sqlite/sqlite3_analyzer.nix

@@ -1,11 +1,11 @@
 { lib, stdenv, fetchurl, unzip, tcl }:
 
 stdenv.mkDerivation {
-  name = "sqlite3_analyzer-3.17.0";
+  name = "sqlite3_analyzer-3.19.2";
 
   src = fetchurl {
-    url = "https://www.sqlite.org/2017/sqlite-src-3170000.zip";
-    sha256 = "1hs8nzk2pjr4fhhrwcyqwpa24gd4ndp6f0japykg5wfadgp4nxc6";
+    url = "https://www.sqlite.org/2017/sqlite-src-3190200.zip";
+    sha256 = "1hdbs41mdyyy641gix87pllsd29p8dim7gj4qvmiyfra2q5kg749";
   };
 
   nativeBuildInputs = [ unzip ];

pkgs/development/ocaml-modules/cmdliner/1.0.nix

@@ -0,0 +1,42 @@
+{ stdenv, fetchurl, ocaml, findlib, ocamlbuild, opam, topkg, result }:
+
+let
+  pname = "cmdliner";
+in
+
+assert stdenv.lib.versionAtLeast ocaml.version "4.01.0";
+
+stdenv.mkDerivation rec {
+  name = "ocaml-${pname}-${version}";
+  version = "1.0.0";
+
+  src = fetchurl {
+    url = "http://erratique.ch/software/${pname}/releases/${pname}-${version}.tbz";
+    sha256 = "1ryn7qis0izg0wcal8zdlikzzl689l75y6f4zc6blrm93y5agy9x";
+  };
+
+  unpackCmd = "tar xjf $src";
+
+  nativeBuildInputs = [ ocamlbuild opam topkg ];
+  buildInputs = [ ocaml findlib ];
+  propagatedBuildInputs = [ result ];
+
+  createFindlibDestdir = true;
+
+  buildPhase = ''
+    ocaml -I ${findlib}/lib/ocaml/${ocaml.version}/site-lib pkg/pkg.ml build
+  '';
+
+  installPhase = ''
+    opam-installer --script --prefix=$out | sh
+    ln -s $out/lib/${pname} $out/lib/ocaml/${ocaml.version}/site-lib/
+  '';
+
+  meta = with stdenv.lib; {
+    homepage = http://erratique.ch/software/cmdliner;
+    description = "An OCaml module for the declarative definition of command line interfaces";
+    license = licenses.bsd3;
+    platforms = ocaml.meta.platforms or [];
+    maintainers = [ maintainers.vbgl ];
+  };
+}

pkgs/development/ocaml-modules/cmdliner/default.nix

@@ -1,33 +1,30 @@
-{ stdenv, fetchurl, ocaml, findlib, ocamlbuild, opam, topkg, result }:
+{ stdenv, fetchurl, ocaml, findlib, ocamlbuild, opam }:
 
 let
   pname = "cmdliner";
 in
 
-assert stdenv.lib.versionAtLeast ocaml.version "4.01.0";
+assert stdenv.lib.versionAtLeast ocaml.version "3.12";
 
 stdenv.mkDerivation rec {
+
   name = "ocaml-${pname}-${version}";
-  version = "1.0.0";
+  version = "0.9.8";
 
   src = fetchurl {
     url = "http://erratique.ch/software/${pname}/releases/${pname}-${version}.tbz";
-    sha256 = "1ryn7qis0izg0wcal8zdlikzzl689l75y6f4zc6blrm93y5agy9x";
+    sha256 = "0hdxlkgiwjml9dpaa80282a8350if7mc1m6yz2mrd7gci3fszykx";
   };
 
   unpackCmd = "tar xjf $src";
-
-  nativeBuildInputs = [ ocamlbuild opam topkg ];
+  nativeBuildInputs = [ ocamlbuild opam ];
   buildInputs = [ ocaml findlib ];
-  propagatedBuildInputs = [ result ];
 
   createFindlibDestdir = true;
 
-  buildPhase = ''
-    ocaml -I ${findlib}/lib/ocaml/${ocaml.version}/site-lib pkg/pkg.ml build
-  '';
-
-  installPhase = ''
+  configurePhase = "ocaml pkg/git.ml";
+  buildPhase     = "ocaml pkg/build.ml native=true native-dynlink=true";
+  installPhase   = ''
     opam-installer --script --prefix=$out | sh
     ln -s $out/lib/${pname} $out/lib/ocaml/${ocaml.version}/site-lib/
   '';

pkgs/development/ocaml-modules/janestreet/default.nix

@@ -1,4 +1,4 @@
-{ lib, janePackage, ocamlbuild, cryptokit, ctypes, magic-mime,
+{ stdenv, lib, janePackage, ocamlbuild, cryptokit, ctypes, magic-mime,
   ocaml-migrate-parsetree, octavius, ounit, ppx_deriving, re, zarith,
   openssl }:
 
@@ -328,7 +328,7 @@ rec {
     propagatedBuildInputs = [ core_kernel ];
     meta = {
       description = "OCaml bindings for RE2";
-      platforms = lib.platforms.linux;
+      broken = stdenv.isDarwin;
     };
   };
 
@@ -348,7 +348,6 @@ rec {
     '';
     meta = {
       description = "Jane Street Capital's standard library overlay";
-      inherit (re2.meta) platforms;
     };
   };
 
@@ -416,7 +415,6 @@ rec {
     propagatedBuildInputs = [ core_extended async ];
     meta = {
       description = "Shell helpers for Async";
-      inherit (core_extended.meta) platforms;
     };
   };
 
@@ -479,7 +477,6 @@ rec {
     propagatedBuildInputs = [ core_extended ];
     meta = {
       description = "Micro-benchmarking library for OCaml";
-      inherit (core_extended.meta) platforms;
     };
   };
 
@@ -489,7 +486,6 @@ rec {
     propagatedBuildInputs = [ core_extended ];
     meta = {
       description = "Profiling library";
-      inherit (core_extended.meta) platforms;
     };
   };
 
@@ -513,7 +509,6 @@ rec {
     propagatedBuildInputs = [ async core_extended cryptokit magic-mime ounit ];
     meta = {
       description = "E-mail message parser";
-      inherit (core_extended.meta) platforms;
     };
   };
 

pkgs/development/python-modules/Pmw/default.nix

@@ -0,0 +1,24 @@
+{ lib , buildPythonPackage , fetchPypi, tkinter }:
+
+buildPythonPackage rec {
+  pname = "Pmw";
+  version = "2.0.1";
+  name = "${pname}-${version}";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "080iml3868nxniyn56kcwnbghm10j7fw74a5nj0s19sm4zsji78b";
+  };
+
+  propagatedBuildInputs = [ tkinter ];
+
+  # Disable tests due to their xserver requirement
+  doCheck = false;
+
+  meta = {
+    description = "A toolkit for building high-level compound widgets in Python using the Tkinter module";
+    homepage = "http://pmw.sourceforge.net/";
+    license = lib.licenses.mit;
+    maintainers = with lib.maintainers; [ mounium ];
+  };
+}

pkgs/development/python-modules/Theano/theano-with-cuda/default.nix

@@ -1,5 +1,7 @@
 { buildPythonPackage
 , fetchFromGitHub
+, pythonOlder
+, future
 , numpy
 , six
 , scipy
@@ -56,7 +58,8 @@ buildPythonPackage rec {
     pycuda
     cudatoolkit
     libgpuarray
-  ] ++ (stdenv.lib.optional (cudnn != null) [ cudnn ]);
+    cudnn
+  ] ++ (stdenv.lib.optional (pythonOlder "3.0") future);
 
   passthru.cudaSupport = true;
 }

pkgs/development/python-modules/aiofiles/default.nix

@@ -0,0 +1,33 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, isPy33
+, pythonOlder
+, asyncio
+, singledispatch
+}:
+
+buildPythonPackage rec {
+  pname = "aiofiles";
+  version = "0.3.1";
+  name = "${pname}-${version}";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "6c4936cea65175277183553dbc27d08b286a24ae5bd86f44fbe485dfcf77a14a";
+  };
+
+  disabled = pythonOlder "3.3";
+
+  propagatedBuildInputs = lib.optionals isPy33 [ asyncio singledispatch ];
+
+  # No tests in archive
+  doCheck = false;
+
+  meta = {
+    description = "File support for asyncio";
+    homepage = https://github.com/Tinche/aiofiles;
+    license = with lib.licenses; [ asl20 ];
+    maintainer = with lib.maintainers; [ fridh ];
+  };
+}

pkgs/development/python-modules/colorama/default.nix

@@ -0,0 +1,22 @@
+{ stdenv, fetchPypi, buildPythonPackage }:
+
+buildPythonPackage rec {
+  name = "${pname}-${version}";
+  pname = "colorama";
+  version = "0.3.9";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "1wd1szk0z3073ghx26ynw43gnc140ibln1safgsis6s6z3s25ss8";
+  };
+
+  # No tests in archive
+  doCheck = false;
+
+  meta = with stdenv.lib; {
+    homepage = https://github.com/tartley/colorama;
+    license = licenses.bsd3;
+    description = "Cross-platform colored terminal text";
+  };
+}
+

pkgs/development/python-modules/dask/default.nix

@@ -0,0 +1,39 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, pytest
+, cloudpickle
+, numpy
+, toolz
+, dill
+, pandas
+, partd
+}:
+
+buildPythonPackage rec {
+  pname = "dask";
+  version = "0.14.3";
+  name = "${pname}-${version}";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "9bf007f9cedc08f73089f0621ff65ec0882fc0a834acef56830dfd2872908211";
+  };
+
+  checkInputs = [ pytest ];
+  propagatedBuildInputs = [ cloudpickle  numpy toolz dill pandas partd ];
+
+  checkPhase = ''
+    py.test dask
+  '';
+
+  # URLError
+  doCheck = false;
+
+  meta = {
+    description = "Minimal task scheduling abstraction";
+    homepage = "http://github.com/ContinuumIO/dask/";
+    license = lib.licenses.bsd3;
+    maintainers = with lib.maintainers; [ fridh ];
+  };
+}

pkgs/development/python-modules/ipython/default.nix

@@ -21,12 +21,12 @@
 
 buildPythonPackage rec {
   pname = "ipython";
-  version = "6.0.0";
+  version = "6.1.0";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "f429b82b8d9807068da734b15965768bd21b15d0b706340b6d1b4d6f6f5b98a4";
+    sha256 = "5c53e8ee4d4bec27879982b9f3b4aa2d6e3cfd7b26782d250fa117f85bb29814";
   };
 
   prePatch = lib.optionalString stdenv.isDarwin ''

pkgs/development/python-modules/libtmux/default.nix

@@ -0,0 +1,26 @@
+{ stdenv, fetchPypi, buildPythonPackage, pytest_29 }:
+
+buildPythonPackage rec {
+  name = "${pname}-${version}";
+  pname = "libtmux";
+  version = "0.7.3";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "111qbgq28za12la5b0aa9rr7hg8235zy0kyzzryn7fa6z3i5k5z8";
+  };
+
+  buildInputs = [ pytest_29 ];
+  patchPhase = ''
+    sed -i 's/==.*$//' requirements/test.txt
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Scripting library for tmux";
+    homepage = https://libtmux.readthedocs.io/;
+    license = licenses.bsd3;
+    platforms = platforms.linux;
+    maintainers = with maintainers; [ jgeerds ];
+  };
+}
+

pkgs/development/python-modules/magic-wormhole/default.nix

@@ -1,6 +1,7 @@
 { lib
 , buildPythonPackage
 , fetchPypi
+, pythonAtLeast
 , nettools
 , glibcLocales
 , autobahn
@@ -12,6 +13,10 @@
 , tqdm
 , python
 , mock
+, ipaddress
+, humanize
+, pyopenssl
+, service-identity
 }:
 
 buildPythonPackage rec {
@@ -26,7 +31,7 @@ buildPythonPackage rec {
 
   checkInputs = [ mock ];
   buildInputs = [ nettools glibcLocales ];
-  propagatedBuildInputs = [ autobahn cffi click hkdf pynacl spake2 tqdm ];
+  propagatedBuildInputs = [ autobahn cffi click hkdf pynacl spake2 tqdm ipaddress humanize pyopenssl service-identity ];
 
   postPatch = ''
     sed -i -e "s|'ifconfig'|'${nettools}/bin/ifconfig'|" src/wormhole/ipaddrs.py
@@ -34,6 +39,8 @@ buildPythonPackage rec {
     # XXX: disable one test due to warning:
     # setlocale: LC_ALL: cannot change locale (en_US.UTF-8)
     sed -i -e "s|def test_text_subprocess|def skip_test_text_subprocess|" src/wormhole/test/test_scripts.py
+  '' + lib.optionalString (pythonAtLeast "3.3") ''
+    sed -i -e 's|"ipaddress",||' setup.py
   '';
 
   checkPhase = ''

pkgs/development/python-modules/nbconvert/default.nix

@@ -0,0 +1,52 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, pytest
+, nose
+, entrypoints
+, bleach
+, mistune
+, jinja2
+, pygments
+, traitlets
+, testpath
+, jupyter_core
+, nbformat
+, nbconvert
+, ipykernel
+, pandocfilters
+, tornado
+, jupyter_client
+}:
+
+buildPythonPackage rec {
+  pname = "nbconvert";
+  version = "5.2.1";
+  name = "${pname}-${version}";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "9ed68ec7fe90a8672b43795b29ea91cc75ea355c83debc83ebd12171521ec274";
+  };
+
+  checkInputs = [ nose pytest ];
+
+  propagatedBuildInputs = [
+    entrypoints bleach mistune jinja2 pygments traitlets testpath
+    jupyter_core nbformat ipykernel pandocfilters tornado jupyter_client
+  ];
+
+  checkPhase = ''
+    nosetests -v
+  '';
+
+  # PermissionError. Likely due to being in a chroot
+  doCheck = false;
+
+  meta = {
+    description = "Converting Jupyter Notebooks";
+    homepage = http://jupyter.org/;
+    license = lib.licenses.bsd3;
+    maintainers = with lib.maintainers; [ fridh ];
+  };
+}

pkgs/development/python-modules/nbformat/default.nix

@@ -0,0 +1,36 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, pytest
+, glibcLocales
+, ipython_genutils
+, traitlets
+, testpath
+, jsonschema
+, jupyter_core
+}:
+
+buildPythonPackage rec {
+  pname = "nbformat";
+  version = "4.3.0";
+  name = "${pname}-${version}";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "5febcce872672f1c97569e89323992bdcb8573fdad703f835e6521253191478b";
+  };
+  LC_ALL="en_US.UTF-8";
+
+  checkInputs = [ pytest glibcLocales ];
+  propagatedBuildInputs = [ ipython_genutils traitlets testpath jsonschema jupyter_core ];
+
+  # Failing tests and permission issues
+  doCheck = false;
+
+  meta = {
+    description = "The Jupyter Notebook format";
+    homepage = "http://jupyter.org/";
+    license = lib.licenses.bsd3;
+    maintainers = with lib.maintainers; [ fridh ];
+  };
+}

pkgs/development/python-modules/ntlm-auth/default.nix

@@ -0,0 +1,37 @@
+{ lib
+, buildPythonPackage
+, fetchFromGitHub
+, mock
+, pytest
+, unittest2
+, six
+}:
+
+buildPythonPackage rec {
+  pname = "ntlm-auth";
+  version = "1.0.3";
+  name = "${pname}-${version}";
+
+  src = fetchFromGitHub {
+    owner = "jborean93";
+    repo = "ntlm-auth";
+    rev = "v${version}";
+    sha256 = "09f2g4ivfi9lh1kr30hlg0q4n2imnvmd79w83gza11q9nmhhiwpz";
+  };
+
+  checkInputs = [ mock pytest unittest2 ];
+  propagatedBuildInputs = [ six ];
+
+  # Functional tests require networking
+  checkPhase = ''
+    py.test --ignore=tests/functional/test_iis.py
+  '';
+
+  meta = with lib; {
+    description = "Calculates NTLM Authentication codes";
+    homepage = https://github.com/jborean93/ntlm-auth;
+    license = licenses.lgpl3;
+    maintainers = with maintainers; [ elasticdog ];
+    platforms = platforms.all;
+  };
+}

pkgs/development/python-modules/pywinrm/default.nix

@@ -0,0 +1,32 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, mock
+, pytest
+, requests
+, requests_ntlm
+, six
+, xmltodict
+}:
+
+buildPythonPackage rec {
+  pname = "pywinrm";
+  version = "0.2.2";
+  name = "${pname}-${version}";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "06xc0mbqf718vmsp0fq0rb64nql66l5w2x23bmqnzl6nzc0gfc1h";
+  };
+
+  checkInputs = [ mock pytest ];
+  propagatedBuildInputs = [ requests requests_ntlm six xmltodict ];
+
+  meta = with lib; {
+    description = "Python library for Windows Remote Management";
+    homepage = "http://github.com/diyan/pywinrm/";
+    license = licenses.mit;
+    maintainers = with maintainers; [ elasticdog ];
+    platforms = platforms.all;
+  };
+}

pkgs/development/python-modules/requests_ntlm/default.nix

@@ -0,0 +1,30 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, ntlm-auth
+, requests
+}:
+
+buildPythonPackage rec {
+  pname = "requests_ntlm";
+  version = "1.0.0";
+  name = "${pname}-${version}";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "0hb689p2jyb867c2wlq5mjkqxgc0jq6lxv3rmhw8rq9qangk3jjk";
+  };
+
+  propagatedBuildInputs = [ ntlm-auth requests ];
+
+  # Tests require networking
+  doCheck = false;
+
+  meta = with lib; {
+    description = "HTTP NTLM authentication support for python-requests";
+    homepage = https://github.com/requests/requests-ntlm;
+    license = licenses.isc;
+    maintainers = with maintainers; [ elasticdog ];
+    platforms = platforms.all;
+  };
+}

pkgs/development/python-modules/uncertainties/default.nix

@@ -0,0 +1,24 @@
+{ stdenv, fetchPypi, buildPythonPackage, nose, numpy }:
+
+buildPythonPackage rec {
+  name = "${pname}-${version}";
+  pname = "uncertainties";
+  version = "3.0.1";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "de0765cac6911e5afa93ee941063a07b4a98dbd9c314c5eea4ab14bfff0054a4";
+  };
+
+  buildInputs = [ nose numpy ];
+
+  # No tests included
+  doCheck = false;
+
+  meta = with stdenv.lib; {
+    homepage = "http://pythonhosted.org/uncertainties/";
+    description = "Transparent calculations with uncertainties on the quantities involved (aka error propagation)";
+    maintainer = with maintainers; [ rnhmjoj ];
+    license = licenses.bsd3;
+  };
+}

pkgs/development/tools/ammonite/default.nix

@@ -2,12 +2,12 @@
 
 stdenv.mkDerivation rec {
   name = "ammonite-${version}";
-  version = "0.9.5";
+  version = "0.9.6";
   scalaVersion = "2.12";
 
   src = fetchurl {
     url = "https://github.com/lihaoyi/Ammonite/releases/download/${version}/${scalaVersion}-${version}";
-    sha256 = "1ni829qpdm5wflc1n827b9ywpv836r2068rmj9yd2nyh8b6q2him";
+    sha256 = "113h8i2i6mlm4f4r2wfj9bggg46lpvamdw3c112qji2y74iriljq";
   };
 
   propagatedBuildInputs = [ jre ] ;

pkgs/development/tools/analysis/randoop/default.nix

@@ -0,0 +1,28 @@
+{ stdenv, fetchurl, unzip }:
+
+stdenv.mkDerivation rec {
+  version = "3.1.5";
+  name = "randoop-${version}";
+
+  src = fetchurl {
+    url = "https://github.com/randoop/randoop/releases/download/v${version}/${name}.zip";
+    sha256 = "13zspyi9fgnqc90qfqqnj0hb7869l0aixv0vwgj8m4m1hggpadlx";
+  };
+
+  buildInputs = [ unzip ];
+
+  installPhase = ''
+    mkdir -p $out/lib $out/doc
+
+    cp -R *.jar $out/lib
+    cp README.txt $out/doc
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Automatic test generation for Java";
+    homepage = https://randoop.github.io/randoop/;
+    license = licenses.mit;
+    maintainers = with maintainers; [ pSub ];
+    platforms = platforms.linux;
+  };
+}

pkgs/development/tools/continuous-integration/jenkins/default.nix

@@ -2,11 +2,11 @@
 
 stdenv.mkDerivation rec {
   name = "jenkins-${version}";
-  version = "2.62";
+  version = "2.63";
 
   src = fetchurl {
     url = "http://mirrors.jenkins-ci.org/war/${version}/jenkins.war";
-    sha256 = "1dqmvbl5sa82zsc03ns5i7ppjmdlg3pyk676xjxyr0p5ccbqlxxh";
+    sha256 = "024bzbca2ikk3904df4f8ri37qjq7nzzmg58jax8cbvcbxcik699";
   };
 
   buildCommand = ''

pkgs/development/tools/database/pgcli/default.nix

@@ -2,10 +2,10 @@
 
 pythonPackages.buildPythonApplication rec {
   name = "pgcli-${version}";
-  version = "1.5.1";
+  version = "1.6.0";
 
   src = fetchFromGitHub {
-    sha256 = "1wp8pzi9hwz16fpcr0mq3ffydwdscfg5whhzc91757dw995sgl0s";
+    sha256 = "0f1zv4kwi2991pclf8chrhgjwf8jkqxdh5ndc9qx6igh56iyyncz";
     rev = "v${version}";
     repo = "pgcli";
     owner = "dbcli";
@@ -13,7 +13,8 @@ pythonPackages.buildPythonApplication rec {
 
   buildInputs = with pythonPackages; [ pytest mock ];
   checkPhase = ''
-    py.test tests -k 'not test_missing_rc_dir and not test_quoted_db_uri and not test_port_db_uri'
+    mkdir /tmp/homeless-shelter
+    HOME=/tmp/homeless-shelter py.test tests -k 'not test_missing_rc_dir and not test_quoted_db_uri and not test_port_db_uri'
   '';
 
   propagatedBuildInputs = with pythonPackages; [

pkgs/development/tools/ocaml/ocp-indent/1.5.2.nix

@@ -0,0 +1,37 @@
+{ stdenv, fetchzip, ocaml, findlib, ocpBuild, opam, cmdliner }:
+
+let inherit (stdenv.lib) getVersion versionAtLeast; in
+
+assert versionAtLeast (getVersion ocaml) "3.12.1";
+assert versionAtLeast (getVersion ocpBuild) "1.99.6-beta";
+assert versionAtLeast "0.9.8" (getVersion cmdliner);
+
+stdenv.mkDerivation {
+
+  name = "ocp-indent-1.5.2";
+
+  src = fetchzip {
+    url = "https://github.com/OCamlPro/ocp-indent/archive/1.5.2.tar.gz";
+    sha256 = "0ynv2yhm7akpvqp72pdabhddwr352s1k85q8m1khsvspgg1mkiqz";
+  };
+
+  nativeBuildInputs = [ ocpBuild opam ];
+
+  buildInputs = [ ocaml findlib cmdliner ];
+
+  createFindlibDestdir = true;
+
+  preConfigure = "patchShebangs ./install.sh";
+
+  postInstall = ''
+    mv $out/lib/{ocp-indent,ocaml/${getVersion ocaml}/site-lib/}
+  '';
+
+  meta = with stdenv.lib; {
+    homepage = "http://typerex.ocamlpro.com/ocp-indent.html";
+    description = "A customizable tool to indent OCaml code";
+    license = licenses.gpl3;
+    platforms = ocaml.meta.platforms or [];
+    maintainers = [ maintainers.jirkamarsik ];
+  };
+}

pkgs/development/tools/rtags/default.nix

@@ -2,7 +2,7 @@
 
 stdenv.mkDerivation rec {
   name = "rtags-${version}";
-  version = "2.8-p1";
+  version = "2.10";
 
   buildInputs = [ cmake llvmPackages.llvm openssl llvmPackages.clang emacs ]
     ++ lib.optionals stdenv.isDarwin [ apple_sdk.libs.xpc apple_sdk.frameworks.CoreServices ];
@@ -12,12 +12,17 @@ stdenv.mkDerivation rec {
            LIBCLANG_LIBDIR="${llvmPackages.clang.cc}/lib"
   '';
 
+
   src = fetchgit {
-    # rev = "refs/tags/v${version}"; # TODO Renable if sha1 below is tagged as release
-    rev = "f85bd60f00d51748ea159b00fda7b5bfa78ef571";
+    rev = "refs/tags/v${version}";
     fetchSubmodules = true;
     url = "https://github.com/andersbakken/rtags.git";
-    sha256 = "0g9sgc763c5d695hjffhis19sbaqk8z4884szljf7kbrjxl17y78";
+    sha256 = "0rv5hz4cfc1adpxvp4j4227nfc0p0yrjdc6l9i32jj11p69a5401";
+    # unicode file names lead to different checksums on HFS+ vs. other
+    # filesystems because of unicode normalisation
+    postFetch = ''
+      rm $out/src/rct/tests/testfile_*.txt
+    '';
   };
 
   enableParallelBuilding = true;

pkgs/development/tools/wp-cli/default.nix

@@ -1,7 +1,7 @@
 { stdenv, lib, fetchurl, php }:
 
 let
-  version = "1.1.0";
+  version = "1.2.0";
 
   bin  = "bin/wp";
   ini  = "etc/php/wp-cli.ini";
@@ -17,7 +17,7 @@ in stdenv.mkDerivation rec {
 
   src = fetchurl {
     url    = "https://github.com/wp-cli/wp-cli/releases/download/v${version}/${name}.phar";
-    sha256 = "08b2lzc8fa9f5xldbdza6x3lg6jsp3wfwpyy187gxqw5pmqp11xc";
+    sha256 = "1v51230gpw3ghz8vp3s1ykrwnmka9gj0r7xjad79bc9y250vr920";
   };
 
   buildCommand = ''

pkgs/development/web/nodejs/v8.nix

@@ -0,0 +1,22 @@
+{ stdenv, fetchurl, openssl, python2, zlib, libuv, v8, utillinux, http-parser
+, pkgconfig, runCommand, which, libtool, fetchpatch
+, callPackage
+, darwin ? null
+, enableNpm ? true
+}@args:
+
+let
+  nodejs = import ./nodejs.nix args;
+  baseName = if enableNpm then "nodejs" else "nodejs-slim";
+in
+  stdenv.mkDerivation (nodejs // rec {
+    version = "8.0.0";
+    name = "${baseName}-${version}";
+    src = fetchurl {
+      url = "https://nodejs.org/download/release/v${version}/node-v${version}.tar.xz";
+      sha256 = "072g2zv58aa5zxs8fs9bdsi3mqklf2yj9mf58yjg5frbcfikm395";
+    };
+
+    patches = stdenv.lib.optionals stdenv.isDarwin [ ./no-xcode-v7.patch ];
+  })
+

pkgs/games/gzdoom/default.nix

@@ -4,13 +4,13 @@
 
 stdenv.mkDerivation rec {
   name = "gzdoom-${version}";
-  version = "3.0.1";
+  version = "3.1.0";
 
   src = fetchFromGitHub {
     owner = "coelckers";
     repo = "gzdoom";
     rev = "g${version}";
-    sha256 = "0s0hl7pa2gr3cm884q7np5naybhv4hqhbfd3s45a8hdf72n6c9cm";
+    sha256 = "02287xvlk4a07ssm9y9h5vfsvdssshz13n5bbz13pfcani5d9flv";
   };
 
   nativeBuildInputs = [ cmake makeWrapper ];

pkgs/games/steam/chrootenv.nix

@@ -2,6 +2,7 @@
 , steam-runtime, steam-runtime-i686 ? null
 , withJava ? false
 , withPrimus ? false
+, extraPkgs ? pkgs: [ ] # extra packages to add to targetPkgs
 , nativeOnly ? false
 , runtimeOnly ? false
 , newStdcpp ? false
@@ -37,7 +38,8 @@ let
       # Zoneinfo
       etc-zoneinfo
     ] ++ lib.optional withJava jdk
-      ++ lib.optional withPrimus primus2;
+      ++ lib.optional withPrimus primus2
+      ++ extraPkgs pkgs;
 
 in buildFHSUserEnv rec {
   name = "steam";

pkgs/misc/emulators/retroarch/cores.nix

@@ -1,6 +1,7 @@
-{ stdenv, fetchgit, pkgconfig, makeWrapper, python27, retroarch
-, alsaLib, fluidsynth, mesa, portaudio, SDL, ffmpeg, libpng, libjpeg
-, libvorbis, zlib }:
+{ stdenv, fetchgit, cmake, pkgconfig, makeWrapper, python27, retroarch
+, alsaLib, fluidsynth, curl, hidapi, mesa, gettext, glib, gtk2, portaudio, SDL
+, ffmpeg, pcre, libevdev, libpng, libjpeg, libudev, libvorbis
+, miniupnpc, sfml, xorg, zlib }:
 
 let
 
@@ -10,7 +11,7 @@ let
   stdenv.lib.makeOverridable stdenv.mkDerivation rec {
 
     name = "libretro-${core}-${version}";
-    version = "2015-11-20";
+    version = "2017-06-04";
     inherit src;
 
     buildInputs = [ makeWrapper retroarch zlib ] ++ a.extraBuildInputs or [];
@@ -54,8 +55,8 @@ in
     core = "4do";
     src = fetchRetro {
       repo = core + "-libretro";
-      rev = "cbd700e2bb95f08f241ca24330fa732aa6af8018";
-      sha256 = "1xp43hpd23rhj96pns13fz9mjp66gmxzl5frqa8q9fqcn2qkx7b1";
+      rev = "52d881743dd8614d96b4de8bd153cb725b87d474";
+      sha256 = "1n42f70vni2zavppayaq8xmsyx5cn40qi4zk4pgq1w3hh2q8mj72";
     };
     description = "Port of 4DO/libfreedo to libretro";
   }).override {
@@ -66,8 +67,8 @@ in
     core = "mednafen-pce-fast";
     src = fetchRetro {
       repo = "beetle-pce-fast-libretro";
-      rev = "6e2eaf75da2eb3dfcf2fd64413f471c8c90cf885";
-      sha256 = "0m946108wzawg0c4xvqpv6yzfmjngz6lji5hn4swgk0z5f2bj5a5";
+      rev = "2954e645d668ee73d93803dc30da4462fc7a459b";
+      sha256 = "0p0k7kqfd6xg1qh6vgzgwp122miprb2bpzljgxd9kvigxihsl6f7";
     };
     description = "Port of Mednafen's PC Engine core to libretro";
   }).override {
@@ -79,8 +80,8 @@ in
     core = "mednafen-psx";
     src = fetchRetro {
       repo = "beetle-psx-libretro";
-      rev = "20c9b0eb0062b8768cc40aca0e2b2d626f1002a2";
-      sha256 = "192xzvdbjjqlxrnxxn45hmrr6yjpxw3gapkbax6nhrabnxhva43k";
+      rev = "76862abefdde9097561e2b795e75b49247deff17";
+      sha256 = "1k4b7g50ajzchjrm6d3v68hvri4k3hzvacn2l99i5yq3hxp7vs7x";
     };
     description = "Port of Mednafen's PSX Engine core to libretro";
   }).override {
@@ -92,8 +93,8 @@ in
     core = "mednafen-saturn";
     src = fetchRetro {
       repo = "beetle-saturn-libretro";
-      rev = "bb5d0c126feb25cf980f5cc1fc57d6a5a6f6e7ab";
-      sha256 = "0bnsdy27378b71y6aa65k4jxxy2xw6ky2ici3z53hkky2jnnjq0b";
+      rev = "3f1661b39ef249e105e6e2e655854ad0c87cd497";
+      sha256 = "1d1brysynwr6inlwfgv7gwkl3i9mf4lsaxd9wm2szw86g4diyn4c";
     };
     description = "Port of Mednafen's Saturn core to libretro";
   }).override {
@@ -106,8 +107,8 @@ in
     core = bname + "-accuracy";
     src = fetchRetro {
       repo = bname;
-      rev = "0bfe7f4f895af0927cec1c06dcae096b59416159";
-      sha256 = "0dmaa1vy6nfj9jk6xkvrbbcxa9j3f3zrp24zflnqbizc088vncb9";
+      rev = "e89c9a2e0a12d588366ee4f5c76b7d75139d938b";
+      sha256 = "0vkn1f38vwazpp3kbvvv8c467ghak6yfx00s48wkxwvhmak74a3s";
     };
     description = "Fork of bsnes with HLE DSP emulation restored";
   }).override {
@@ -118,27 +119,55 @@ in
     core = "desmume";
     src = fetchRetro {
       repo = core;
-      rev = "cae5945149a72b1dc0b130d6e60e2690b88a925a";
-      sha256 = "1qzlbw0vy87zi3w6hp5zj9dxdkj3qc9czjf41sj70irwyvqi0kii";
+      rev = "ce1f93abb4c3aa55099f56298e5438a03a3c2bbd";
+      sha256 = "064gzfbr7yizmvi91ry5y6bzikj633kdqhvzycb9f1g6kspf8yyl";
     };
     description = "libretro wrapper for desmume NDS emulator";
   }).override {
     configurePhase = "cd desmume";
   };
 
+  dolphin = (mkLibRetroCore {
+    core = "dolphin";
+    src = fetchRetro {
+      repo = "dolphin";
+      rev = "a6ad451fdd4ac8753fd1a8e2234ec34674677754";
+      sha256 = "1cshlfmhph8dl3vgvn37imvp2b7xs2cx1r1ifp5js5psvhycrbz3";
+    };
+    description = "Port of Dolphin to libretro";
+
+    extraBuildInputs = [
+      cmake curl mesa pcre pkgconfig sfml miniupnpc
+      gettext glib gtk2 hidapi
+      libevdev libudev
+    ] ++ (with xorg; [ libSM libX11 libXi libpthreadstubs libxcb xcbutil ]);
+  }).override {
+    cmakeFlags = [
+        "-DLINUX_LOCAL_DEV=true"
+        "-DGTK2_GDKCONFIG_INCLUDE_DIR=${gtk2.out}/lib/gtk-2.0/include"
+        "-DGTK2_GLIBCONFIG_INCLUDE_DIR=${glib.out}/lib/glib-2.0/include"
+        "-DGTK2_INCLUDE_DIRS=${gtk2.dev}/include/gtk-2.0"
+    ];
+    dontUseCmakeBuildDir = "yes";
+    buildPhase = ''
+      cd Source/Core/DolphinLibretro
+      make
+    '';
+  };
+
   fba = (mkLibRetroCore rec {
     core = "fba";
     src = fetchRetro {
       repo = core + "-libretro";
-      rev = "b642e054a1f581fbac16c08f4b8df9ab6c474203";
-      sha256 = "0jxbzjhpyw1fzipm2ai2nv62vb0q5cb203m093vakr1zdsx7si2n";
+      rev = "9146c18ac989c619256d1cb8954d49e728e44ea3";
+      sha256 = "159dww8mxi95xz4ypw38vsn1g4k6z8sv415qqf0qriydwhw6mh2m";
     };
     description = "Port of Final Burn Alpha to libretro";
   }).override {
     buildPhase = ''
       cd svn-current/trunk \
       && make -f makefile.libretro \
-      && mv fb_alpha_libretro.so fba_libretro.so
+      && mv fbalpha2012_libretro.so fba_libretro.so
     '';
   };
 
@@ -146,30 +175,28 @@ in
     core = "fceumm";
     src = fetchRetro {
       repo = "libretro-" + core;
-      rev = "eb19d48804ebeb381b20e74db7033c321f6b6d04";
-      sha256 = "18wm6yzwshqfkd75kkcv035p1s2yhnchn98bcn9aj15aw5qyhvd4";
+      rev = "45f773a1c221121746bbe2680e3aaaf92776a87e";
+      sha256 = "0jnwh1338q710x47bzrx319g5xbq9ipv35kyjlbkrzhqjq1blz0b";
     };
     description = "FCEUmm libretro port";
   };
 
-  gambatte = (mkLibRetroCore rec {
+  gambatte = mkLibRetroCore rec {
     core = "gambatte";
     src = fetchRetro {
       repo = core + "-libretro";
-      rev = "59fb6a652e0de3c3a3b29e58af5ac035958da37e";
-      sha256 = "0n2416lgqbzah1q3ji1hhpcdi9h29563gz739kf9libmnz86vd6f";
+      rev = "db7af6cf6ea39fd5e39eea137ff752649599a4e4";
+      sha256 = "0h7hyj630nk1s32wx02y4q9x2lp6wbnh6nkc9ihf4pygcsignmwr";
     };
     description = "Gambatte libretro port";
-  }).override {
-    configurePhase = "cd libgambatte";
   };
 
   genesis-plus-gx = mkLibRetroCore rec {
     core = "genesis-plus-gx";
     src = fetchRetro {
       repo = "Genesis-Plus-GX";
-      rev = "7d8d5f1026af8cfd00cdf32c67a999bd1e454a09";
-      sha256 = "16jm97h66bb2sqlimjlks31sapb23x4q8sr16wdqn1xgi670xw3c";
+      rev = "365a28c7349b691e6aaa3ad59b055261c42bd130";
+      sha256 = "0s11ddpnb44q4xjkl7dylldhi9y5zqywqavpk0bbwyj84r1cbz3c";
     };
     description = "Enhanced Genesis Plus libretro port";
   };
@@ -178,20 +205,20 @@ in
     core = "mame";
     src = fetchRetro {
       repo = "mame";
-      rev = "8da2303292bb8530f9f4ffad8bf1df95ee4cab74";
-      sha256 = "0afsxsm1d4x9jn28qz6v47hhnp7q9i0yqk62i4lk4d7i7m4dq5j9";
+      rev = "9f8a36adeb4dc54ec2ecac992ce91bcdb377519e";
+      sha256 = "0blfvq28hgv9kkpijd8c9d9sa5g2qr448clwi7wrj8kqfdnrr8m1";
     };
     description = "Port of MAME to libretro";
 
-    extraBuildInputs = [ alsaLib portaudio python27 ];
+    extraBuildInputs = [ alsaLib mesa portaudio python27 xorg.libX11 ];
   };
 
   mgba = mkLibRetroCore rec {
     core = "mgba";
     src = fetchRetro {
       repo = core;
-      rev = "4000128339b535896615c994cafcd777637573f4";
-      sha256 = "1yar78rvgfqx7jdna9chkmmbnpcf7k9ckbzj506f7k7m7zv819fn";
+      rev = "fdaaaee661e59f28c94c7cfa4e82e70b71e24a9d";
+      sha256 = "1b30sa861r4bhbqkx6vkklh4iy625bpzki2ks4ivvjns1ijczvc7";
     };
     description = "Port of mGBA to libretro";
   };
@@ -200,12 +227,12 @@ in
     core = "mupen64plus";
     src = fetchRetro {
       repo = core + "-libretro";
-      rev = "7db9296453629a44de806589f3ff64e824e775ad";
-      sha256 = "075lpmwmj99yf9d9905x7apawd4bqz0whr37mh2fgr3jf730yiyl";
+      rev = "407bcd40b3a42bff6b856a6d6f88a7d5d670bf9e";
+      sha256 = "0q5kvjz7rpk7mp75cdywqjgmy10c0h7ky26hh1x90d39y94idcd8";
     };
     description = "Libretro port of Mupen64 Plus, GL only";
 
-    extraBuildInputs = [ mesa ];
+    extraBuildInputs = [ mesa libpng ];
   }).override {
     buildPhase = "make WITH_DYNAREC=${if stdenv.system == "x86_64-linux" then "x86_64" else "x86"}";
   };
@@ -214,8 +241,8 @@ in
     core = "nestopia";
     src = fetchRetro {
       repo = core;
-      rev = "dcaed965760669161d6fd44755887545ea393041";
-      sha256 = "03fy5hb181ffx8sk9wmm415k084zqqhfqga4crgc7hdqi16s3r5v";
+      rev = "ecfa170a582e5b8ec11225ca645843fa064955ca";
+      sha256 = "17ac7dhasch6f4lpill8c5scsvaix0jvbf1cp797qbll4hk84f2q";
     };
     description = "nestopia undead libretro port";
   }).override {
@@ -226,8 +253,8 @@ in
     core = "picodrive";
     src = fetchRetro {
       repo = core;
-      rev = "e912fdf26376bfa5d7d6488055fe6fdbd13c2e49";
-      sha256 = "1mi36y8kx6s76cgygpj11zw35p44gd66mxygmxliz7k6xsd7ww41";
+      rev = "cbc93b68dca1d72882d07b54bbe1ef25b980558a";
+      sha256 = "0fl9r6jj2x9231md5zc4scra79j5hfn1n2z67scff1375xg1k64h";
     };
     description = "Fast MegaDrive/MegaCD/32X emulator";
 
@@ -241,8 +268,8 @@ in
     core = "ppsspp";
     src = fetchRetro {
       repo = "libretro-" + core;
-      rev = "ea17e27fcf16b9f875718b6550fe7145c6257c06";
-      sha256 = "0w5njj5pamqc4a022hdplb7vapwkf34ad1w4acz3c8b05vkl457d";
+      rev = "5f7bcf7bfc15f83d405bcecd7a163a55ad1e7573";
+      sha256 = "06k1gzmypz61dslynrw4b5i161rhj43y6wnr2nhbzvwcv5bw8w8r";
     };
     description = "ppsspp libretro port";
     extraBuildInputs = [ mesa ffmpeg ];
@@ -254,8 +281,8 @@ in
     core = "prboom";
     src = fetchRetro {
       repo = "libretro-" + core;
-      rev = "90ad0db331c53e8851581e1547b7377fb9fffe5b";
-      sha256 = "0jk73nakrs9jxj3d0dmjs0csskjhddn8a4sky3mpk9vp30csx0ll";
+      rev = "4c690eb6b569a276c5b2a87680718f715477eae2";
+      sha256 = "02vkl3y5dmyzifsviphspqv03a2rdyf36zpjpgfg7x0s226f56ja";
     };
     description = "Prboom libretro port";
   }).override {
@@ -266,8 +293,8 @@ in
     core = "quicknes";
     src = fetchRetro {
       repo = "QuickNES_Core";
-      rev = "518638b8064c9d0cb1b5aa29d96419f8528c9de5";
-      sha256 = "0jv1z65m4j3hbfnb3chklh0dhwlc4gdqr0asswdsc1y4iwp0331c";
+      rev = "8613b48cee97f1472145bbafa76e543854b2bbd5";
+      sha256 = "18lizdb9zjlfhh8ibvmcscldlf3mw4aj8nds3pah68cd2lw170w1";
     };
     description = "QuickNES libretro port";
   }).override {
@@ -278,8 +305,8 @@ in
     core = "reicast";
     src = fetchRetro {
       repo = core + "-emulator";
-      rev = "ed47c72cf2e124d9d753285fd61d12ea8e071d0d";
-      sha256 = "05dw7qjnprf1lw3ps0sb7sp73hsh1a27rxbwjqd26j85zr84g3r9";
+      rev = "40d4e8af2dd67a3f317c14224873c8ec0e1f9d11";
+      sha256 = "0d8wzpv7pcyh437gmvi439vim26wyrjmi5hj97wvyvggywjwrx8m";
     };
     description = "Reicast libretro port";
     extraBuildInputs = [ mesa ];
@@ -291,8 +318,8 @@ in
     core = "scummvm";
     src = fetchRetro {
       repo = core;
-      rev = "c3e719acc08c1873609bab3578939b7c9e606511";
-      sha256 = "03wvffy3h62qc7f3d8042wd234m8ikd843ggp903y285sgh54r9y";
+      rev = "de8d7e58caa23f071ce9d1bc5133f45d16c3ff1c";
+      sha256 = "097i2dq3hw14hicsplrs36j1qa3r45vhzny5v4aw6qw4aj34hksy";
     };
     description = "Libretro port of ScummVM";
     extraBuildInputs = [ fluidsynth libjpeg libvorbis mesa SDL ];
@@ -304,30 +331,35 @@ in
     core = "snes9x";
     src = fetchRetro {
       repo = core;
-      rev = "ccf1ee2eae73ed1e4044c8dd9536dd4ac1be6d8b";
-      sha256 = "1bwjk817m8v69s13fc9kcj605ig6707rsj57wmz2ri2ggmydhvcb";
+      rev = "db4bfaba3b0d5a067fe9aea323503656837a8d9a";
+      sha256 = "02f04ss45km32lp68diyfkix1gryx89qy8cc80189ipwnx80pgip";
     };
     description = "Port of SNES9x git to libretro";
   }).override {
     buildPhase = "cd libretro && make";
   };
 
-  snes9x-next = mkLibRetroCore rec {
+  snes9x-next = (mkLibRetroCore rec {
     core = "snes9x-next";
     src = fetchRetro {
       repo = core;
-      rev = "dfb7eef46d6bc2dbcc98f25e2bfadc9d2cff5cfd";
-      sha256 = "0vdfjdwr6b5izh3gy63lcfnrdvr99qhlqfibjw4mmyqk9gkjrwm8";
+      rev = "b2a69de0df1eb39ed362806f9c9633f4544272af";
+      sha256 = "1vhgsrg9l562nincfvpj2h2dqkkblg1qmh0v47jqlqgmgl2b1zij";
     };
     description = "Optimized port/rewrite of SNES9x 1.52+ to Libretro";
+  }).override {
+    buildPhase = ''
+      make -f Makefile.libretro
+      mv snes9x2010_libretro.so snes9x_next_libretro.so
+    '';
   };
 
   stella = (mkLibRetroCore rec {
     core = "stella";
     src = fetchRetro {
       repo = core + "-libretro";
-      rev = "ada5c57d632ace0ba915ce7a470d504a5d89ebcc";
-      sha256 = "090isch1l5hm07l22l8hja31cdiaxc0vgc3i01qs8zgdyvsx4vvg";
+      rev = "bbe65db0e344dcb38905586bd853076b65963e5a";
+      sha256 = "18r1yyfzvjq2hq04d94y37kzsq6aywh1aim69a3imk8kh46gwrh0";
     };
     description = "Port of Stella to libretro";
   }).override {
@@ -338,8 +370,8 @@ in
     core = "vba-next";
     src = fetchRetro {
       repo = core;
-      rev = "0c20cd92bc8684340d7a1bcae14a603001ad5e4a";
-      sha256 = "016vm2xyjfkkcqkqfw3n09if4bxxppk3g6p92waa9bv2ni4xli69";
+      rev = "e7734756d228ea604f8fa872cea1bba987780791";
+      sha256 = "03s4rh7dbbhbfc4pfdvr9jcbxrp4ijg8yp49s1xhr7sxsblj2vpv";
     };
     description = "VBA-M libretro port with modifications for speed";
   };
@@ -348,8 +380,8 @@ in
     core = "vbam";
     src = fetchRetro {
       repo = core + "-libretro";
-      rev = "bedddba614bc4fcbcf5b0d8565f94619b094c20c";
-      sha256 = "1hvq4wsznb2vzg11iqmy5dnfjpiga368p1lmsx9d7ci7dcqyw7wy";
+      rev = "1b82fc2d761f027567632692f787482d1e287ec2";
+      sha256 = "043djmqvh2grc25hwjw4b5kfx57b89ryp6fcl8v632sm35l3dd6z";
     };
     description = "vanilla VBA-M libretro port";
   }).override {

pkgs/misc/emulators/retroarch/default.nix

@@ -23,12 +23,12 @@ in
 
 stdenv.mkDerivation rec {
   name = "retroarch-bare-${version}";
-  version = "1.3.4";
+  version = "1.6.0";
 
   src = fetchFromGitHub {
     owner = "libretro";
     repo = "RetroArch";
-    sha256 = "0ccp17580w0884baxj5kcynlm03jgd7i62dprz1ajxbi2s7b3mi3";
+    sha256 = "1ym2kws58fbavkc3giz5xqaqiqqdbf7wrz7y7iw53p1bnkc3l8yi";
     rev = "v${version}";
   };
 

pkgs/misc/emulators/wine/base.nix

@@ -91,9 +91,13 @@ stdenv.mkDerivation ((lib.optionalAttrs (! isNull buildScript) {
           ((map (links "share/wine/gecko") geckos)
         ++ (map (links "share/wine/mono")  monos))}
   '' + lib.optionalString supportFlags.gstreamerSupport ''
-    wrapProgram "$out/bin/wine" \
-      --argv0 "" \
-      --prefix GST_PLUGIN_SYSTEM_PATH_1_0 ":" "$GST_PLUGIN_SYSTEM_PATH_1_0"
+    for i in wine wine64; do
+      if [ -e "$out/bin/$i" ]; then
+        wrapProgram "$out/bin/$i" \
+          --argv0 "" \
+          --prefix GST_PLUGIN_SYSTEM_PATH_1_0 ":" "$GST_PLUGIN_SYSTEM_PATH_1_0"
+      fi
+    done
   '';
   
   enableParallelBuilding = true;

pkgs/misc/screensavers/xlockmore/default.nix

@@ -3,10 +3,10 @@
 
 stdenv.mkDerivation rec {
 
-  name = "xlockmore-5.53";
+  name = "xlockmore-5.54";
   src = fetchurl {
     url = "http://sillycycle.com/xlock/${name}.tar.xz";
-    sha256 = "0rs9vc22xgk9gi88ifimdyrhqfjgs2jybwr9kvklg5qx7ff6aws9";
+    sha256 = "0mdgl20619iii1i04pj2dq29nwvasbngy48cvd819h0wfawsqkwz";
     curlOpts = "--user-agent 'Mozilla/5.0'";
   };
 

pkgs/os-specific/linux/bcc/default.nix

@@ -2,14 +2,14 @@
   flex, bison, elfutils, python, pythonPackages, luajit, netperf, iperf }:
 
 stdenv.mkDerivation rec {
-  version = "0.2.0";
+  version = "0.3.0";
   name = "bcc-${version}";
 
   src = fetchFromGitHub {
     owner = "iovisor";
     repo = "bcc";
     rev = "v${version}";
-    sha256 = "1xifh8lcqmn4mk6w4srjf4zk6mlwgck4fpcyhhliy39963ch5k08";
+    sha256 = "19lkqmilfjmj7bnhxlacd0waa5db8gf4lng12fy2zgji0d77vm1d";
   };
 
   buildInputs = [ makeWrapper cmake llvmPackages.llvm llvmPackages.clang-unwrapped kernel

pkgs/os-specific/linux/broadcom-sta/default.nix

@@ -27,6 +27,8 @@ stdenv.mkDerivation {
     ./linux-4.7.patch
     # source: https://git.archlinux.org/svntogit/community.git/tree/trunk/004-linux48.patch?h=packages/broadcom-wl-dkms
     ./linux-4.8.patch
+    # source: https://aur.archlinux.org/cgit/aur.git/tree/linux411.patch?h=broadcom-wl
+    ./linux-4.11.patch
     ./null-pointer-fix.patch
     ./gcc.patch
   ];

pkgs/os-specific/linux/broadcom-sta/linux-4.11.patch

@@ -0,0 +1,52 @@
+diff --git a/src/wl/sys/wl_cfg80211_hybrid.c b/src/wl/sys/wl_cfg80211_hybrid.c
+index a9671e2..da36405 100644
+--- a/src/wl/sys/wl_cfg80211_hybrid.c
++++ b/src/wl/sys/wl_cfg80211_hybrid.c
+@@ -30,6 +30,9 @@
+ #include <linux/kthread.h>
+ #include <linux/netdevice.h>
+ #include <linux/ieee80211.h>
++#if LINUX_VERSION_CODE >= KERNEL_VERSION(4, 11, 0)
++#include <linux/sched/signal.h>
++#endif
+ #include <net/cfg80211.h>
+ #include <linux/nl80211.h>
+ #include <net/rtnetlink.h>
+diff --git a/src/wl/sys/wl_linux.c b/src/wl/sys/wl_linux.c
+index 489c9f5..f8278ad 100644
+--- a/src/wl/sys/wl_linux.c
++++ b/src/wl/sys/wl_linux.c
+@@ -117,6 +117,9 @@ int wl_found = 0;
+ 
+ typedef struct priv_link {
+ 	wl_if_t *wlif;
++#if LINUX_VERSION_CODE >= KERNEL_VERSION(4, 11, 0)
++	unsigned long last_rx;
++#endif
+ } priv_link_t;
+ 
+ #define WL_DEV_IF(dev)          ((wl_if_t*)((priv_link_t*)DEV_PRIV(dev))->wlif)
+@@ -2450,6 +2453,9 @@ wl_monitor(wl_info_t *wl, wl_rxsts_t *rxsts, void *p)
+ {
+ 	struct sk_buff *oskb = (struct sk_buff *)p;
+ 	struct sk_buff *skb;
++#if LINUX_VERSION_CODE >= KERNEL_VERSION(4, 11, 0)
++	priv_link_t *priv_link;
++#endif
+ 	uchar *pdata;
+ 	uint len;
+ 
+@@ -2916,7 +2922,13 @@ wl_monitor(wl_info_t *wl, wl_rxsts_t *rxsts, void *p)
+ 	if (skb == NULL) return;
+ 
+ 	skb->dev = wl->monitor_dev;
++#if LINUX_VERSION_CODE >= KERNEL_VERSION(4, 11, 0)
++	priv_link = MALLOC(wl->osh, sizeof(priv_link_t));
++	priv_link = netdev_priv(skb->dev);
++	priv_link->last_rx = jiffies;
++#else
+ 	skb->dev->last_rx = jiffies;
++#endif
+ #if LINUX_VERSION_CODE >= KERNEL_VERSION(2, 6, 22)
+ 	skb_reset_mac_header(skb);
+ #else

pkgs/os-specific/linux/sysdig/default.nix

@@ -12,6 +12,14 @@ stdenv.mkDerivation rec {
     sha256 = "1h3f9nkc5fkvks6va0maq377m9qxnsf4q3f2dc14rdzfvnzidy06";
   };
 
+  patches = [
+    (fetchpatch {
+       # Sysdig fails to run on linux kernels with unified cgroups enabled
+       url = https://github.com/draios/sysdig/files/909689/0001-Fix-for-linux-kernels-with-cgroup-v2-API-enabled.patch.txt;
+       sha256 = "10nmisifa500hzpa3899rs837bcal72pnqidxmrnr1js187z8j84";
+    })
+  ];
+
   buildInputs = [
     cmake zlib luajit ncurses perl jsoncpp libb64 openssl curl jq gcc
   ];

pkgs/os-specific/linux/tomb/default.nix

@@ -1,18 +1,23 @@
-{ stdenv, fetchurl, zsh, pinentry, cryptsetup, gnupg1orig, makeWrapper }:
-
-let
-    version = "2.4";
-in
+{ stdenv, lib, fetchFromGitHub, gettext, zsh, pinentry, cryptsetup, gnupg, makeWrapper }:
 
 stdenv.mkDerivation rec {
   name = "tomb-${version}";
+  version = "2.4";
 
-  src = fetchurl {
-    url = "https://files.dyne.org/tomb/Tomb-${version}.tar.gz";
-    sha256 = "1hv1w79as7swqj0n137vz8n8mwvcgwlvd91sdyssz41jarg7f1vr";
+  src = fetchFromGitHub {
+    owner  = "dyne";
+    repo   = "Tomb";
+    rev    = "v${version}";
+    sha256 = "192jpgn02mvi4d4inbq2q11zl7xw6njymvali7al8wmygkkycrw4";
   };
 
-  buildInputs = [ makeWrapper ];
+  nativeBuildInputs = [ makeWrapper ];
+
+  postPatch = ''
+    # if not, it shows .tomb-wrapped when running
+    substituteInPlace tomb \
+      --replace 'TOMBEXEC=$0' 'TOMBEXEC=tomb'
+  '';
 
   buildPhase = ''
     # manually patch the interpreter
@@ -20,22 +25,21 @@ stdenv.mkDerivation rec {
   '';
 
   installPhase = ''
-    mkdir -p $out/bin
-    mkdir -p $out/share/man/man1
+    install -Dm755 tomb       $out/bin/tomb
+    install -Dm644 doc/tomb.1 $out/share/man/man1/tomb.1
 
-    cp tomb $out/bin/tomb
-    cp doc/tomb.1 $out/share/man/man1
+    # it works fine with gnupg v2, but it looks for an executable named gpg
+    ln -s ${gnupg}/bin/gpg2 $out/bin/gpg
 
     wrapProgram $out/bin/tomb \
-        --prefix PATH : "${pinentry}/bin" \
-        --prefix PATH : "${cryptsetup}/bin" \
-        --prefix PATH : "${gnupg1orig}/bin"
+      --prefix PATH : $out/bin:${lib.makeBinPath [ cryptsetup gettext pinentry ]}
   '';
 
-  meta = {
+  meta = with stdenv.lib; {
     description = "File encryption on GNU/Linux";
-    homepage = https://www.dyne.org/software/tomb/;
-    license = stdenv.lib.licenses.gpl3;
-    platforms = stdenv.lib.platforms.linux;
+    homepage    = https://www.dyne.org/software/tomb/;
+    license     = licenses.gpl3;
+    maintainers = with maintainers; [ peterhoeg ];
+    platforms   = platforms.linux;
   };
 }

pkgs/os-specific/linux/wireguard/default.nix

@@ -6,11 +6,11 @@ assert kernel != null -> stdenv.lib.versionAtLeast kernel.version "3.10";
 let
   name = "wireguard-${version}";
 
-  version = "0.0.20170517";
+  version = "0.0.20170531";
 
   src = fetchurl {
     url    = "https://git.zx2c4.com/WireGuard/snapshot/WireGuard-${version}.tar.xz";
-    sha256 = "7303e973654a3585039f4789e89a562f807f0d6010c7787b9b69ca72aa7a6908";
+    sha256 = "1k6asxx7qzmxasvdwkvlalvav643fqfbndv80vjkbjqxy6mdkdrf";
   };
 
   meta = with stdenv.lib; {

pkgs/servers/dex/default.nix

@@ -0,0 +1,32 @@
+{ lib, buildGoPackage, fetchFromGitHub }:
+
+let version = "2.4.1"; in
+
+buildGoPackage rec {
+  name = "dex-${version}";
+
+  goPackagePath = "github.com/coreos/dex";
+
+  src = fetchFromGitHub {
+    rev = "v${version}";
+    owner = "coreos";
+    repo = "dex";
+    sha256 = "11qpn3wh74mq16xgl9l50n2v02ffqcd14xccf77j5il04xr764nx";
+  };
+
+  subPackages = [
+    "cmd/dex"
+  ];
+
+  buildFlagsArray = [
+    "-ldflags=-w -X ${goPackagePath}/version.Version=${src.rev}"
+  ];
+
+  meta = {
+    description = "OpenID Connect and OAuth2 identity provider with pluggable connectors";
+    license = lib.licenses.asl20;
+    homepage = https://github.com/coreos/dex;
+    maintainers = with lib.maintainers; [benley];
+    platforms = lib.platforms.unix;
+  };
+}

pkgs/servers/search/groonga/default.nix

@@ -7,11 +7,11 @@
 stdenv.mkDerivation rec {
 
   name    = "groonga-${version}";
-  version = "7.0.0";
+  version = "7.0.3";
 
   src = fetchurl {
     url    = "http://packages.groonga.org/source/groonga/${name}.tar.gz";
-    sha256 = "0c3vzw2ias0xpz1hwywlib1qqfjvvzwj1zggswd5l2cj87f1krfd";
+    sha256 = "17pp4sbfa6wpiiiqvdbnvd1qxrchmj7zh27zdrmmnbvwpyc5g2n6";
   };
 
   buildInputs = with stdenv.lib;

pkgs/servers/uwsgi/default.nix

@@ -34,7 +34,7 @@ let pythonPlugin = pkg : lib.nameValuePair "python${if pkg ? isPy2 then "2" else
                     # usage: https://uwsgi-docs.readthedocs.io/en/latest/PHP.html#running-php-apps-with-nginx
                     path = "plugins/php";
                     preBuild = "touch unix.h";
-                    inputs = [ php-embed php-embed.nativeBuildInputs ];
+                    inputs = [ php-embed ] ++ php-embed.buildInputs;
                   })
                 ];
 

pkgs/tools/misc/patdiff/default.nix

@@ -8,6 +8,5 @@ janePackage {
   buildInputs = [ core_extended expect_test_helpers patience_diff ocaml_pcre ];
   meta = {
     description = "File Diff using the Patience Diff algorithm";
-    inherit (core_extended.meta) platforms;
   };
 }

pkgs/tools/misc/qt5ct/default.nix

@@ -1,17 +1,18 @@
-{stdenv, fetchurl, qtbase, qtsvg, qttools, qmakeHook, makeQtWrapper}:
+{ stdenv, fetchurl, qtbase, qtsvg, qttools, qmakeHook, makeQtWrapper }:
 
 stdenv.mkDerivation rec {
   name = "qt5ct-${version}";
-  version = "0.30";
+  version = "0.32";
 
   src = fetchurl {
     url = "mirror://sourceforge/qt5ct/qt5ct-${version}.tar.bz2";
-    sha256 = "1k0ywd440qvf84chadjb4fnkn8dkfl56cc3a6wqg6a59drslvng6";
+    sha256 = "0gzmqx6j8g8vgdg5sazfw31h825jdsjbkj8lk167msvahxgrf0fm";
   };
 
-  buildInputs = [ qtbase qtsvg ];
   nativeBuildInputs = [ makeQtWrapper qmakeHook qttools ];
 
+  buildInputs = [ qtbase qtsvg ];
+
   preConfigure = ''
     qmakeFlags="$qmakeFlags PLUGINDIR=$out/lib/qt5/plugins"
   '';

pkgs/tools/misc/tmuxp/default.nix

@@ -2,17 +2,17 @@
 
 pythonPackages.buildPythonApplication rec {
   name = "tmuxp-${version}";
-  version = "1.2.7";
+  version = "1.3.1";
 
   namePrefix = "";
 
   src = fetchurl {
     url = "mirror://pypi/t/tmuxp/${name}.tar.gz";
-    sha256 = "19s17frgyjvyvmr16fs0gl5mnbaxbmdffmkckadwhd5mg0pz2i4s";
+    sha256 = "189mxnb2pxj3wjijn56j8y5x1r23fil00fn2q7d6bd13vgr0f85s";
   };
 
   patchPhase = ''
-    sed -i 's/==.*$//' requirements/test.txt
+    sed -i 's/==.*$//' requirements/base.txt requirements/test.txt
   '';
 
   buildInputs = with pythonPackages; [

pkgs/tools/misc/trash-cli/default.nix

@@ -1,4 +1,4 @@
-{ stdenv, fetchFromGitHub, coreutils
+{ stdenv, fetchFromGitHub, fetchpatch, coreutils
 , python3, python3Packages, substituteAll }:
 
 assert stdenv.isLinux;
@@ -21,6 +21,12 @@ python3Packages.buildPythonApplication rec {
       df = "${coreutils}/bin/df";
       libc = "${stdenv.cc.libc.out}/lib/libc.so.6";
     })
+
+    # Fix build on Python 3.6.
+    (fetchpatch {
+      url = "https://github.com/andreafrancia/trash-cli/commit/a21b80d1e69783bb09376c3f60dd2f2a10578805.patch";
+      sha256 = "0w49rjh433sjfc2cl5a9wlbr6kcn9f1qg905qsyv7ay3ar75wvyp";
+    })
   ];
 
   buildInputs = with python3Packages; [ nose mock ];

pkgs/tools/misc/youtube-dl/default.nix

@@ -1,5 +1,5 @@
 { stdenv, fetchurl, buildPythonApplication
-, zip, ffmpeg, rtmpdump, atomicparsley, pandoc
+, zip, ffmpeg, rtmpdump, atomicparsley, pycryptodome, pandoc
 # Pandoc is required to build the package's man page. Release tarballs contain a
 # formatted man page already, though, it will still be installed. We keep the
 # manpage argument in place in case someone wants to use this derivation to
@@ -8,21 +8,23 @@
 , generateManPage ? false
 , ffmpegSupport ? true
 , rtmpSupport ? true
+, hlsEncryptedSupport ? true
 , makeWrapper }:
 
 with stdenv.lib;
 buildPythonApplication rec {
 
   name = "youtube-dl-${version}";
-  version = "2017.05.23";
+  version = "2017.05.29";
 
   src = fetchurl {
     url = "https://yt-dl.org/downloads/${version}/${name}.tar.gz";
-    sha256 = "1na2ccja8p18i3ypf7vjrxlh653906746l966fwm06b5q6867iwd";
+    sha256 = "11zh0h4hwwx39iv6qbkqbvf5a5mgj71ngj2kp7zmq7g0qh37x9rx";
   };
 
   nativeBuildInputs = [ makeWrapper ];
   buildInputs = [ zip ] ++ optional generateManPage pandoc;
+  propagatedBuildInputs = optional hlsEncryptedSupport pycryptodome;
 
   # Ensure ffmpeg is available in $PATH for post-processing & transcoding support.
   # rtmpdump is required to download files over RTMP

pkgs/tools/networking/dd-agent/default.nix

@@ -1,11 +1,5 @@
 { stdenv, fetchFromGitHub, pythonPackages
-, sysstat, unzip, makeWrapper
-# We need extraBuildInputs as we want to be able to override this
-# package with python packages _and_ have the produced binaries
-# wrapper with their PYTHONPATH. This means overrideAttrs is not
-# strong enough (it overrides too late), we need to call it
-# beforehand.
-, extraBuildInputs ? [ pythonPackages.psutil ] }:
+, sysstat, unzip, makeWrapper }:
 let
   inherit (pythonPackages) python;
   docker_1_10 = pythonPackages.buildPythonPackage rec {
@@ -32,42 +26,33 @@ let
     # due to flake8
     doCheck = false;
   };
-  version = "5.13.2";
-
-  integrations = fetchFromGitHub {
-    owner = "datadog";
-    repo = "integrations-core";
-    rev = version;
-    sha256 = "1nbjmkq0wdfndmx0qap69h2rkwkkb0632j87h9d3j99bykyav3y3";
-  };
 
 in stdenv.mkDerivation rec {
+  version = "5.11.2";
   name = "dd-agent-${version}";
 
   src = fetchFromGitHub {
     owner  = "datadog";
     repo   = "dd-agent";
     rev    = version;
-    sha256 = "0x2bxi70l2yf0wi232qksvcscjdpjg8l7dmgg1286vqryyfazfjb";
+    sha256 = "1iqxvgpsqibqw3vk79158l2pnb6y4pjhjp2d6724lm5rpz4825lx";
   };
 
   buildInputs = [
     python
     unzip
     makeWrapper
-    pythonPackages.boto
-    docker_1_10
-    pythonPackages.kazoo
-    pythonPackages.ntplib
-    pythonPackages.consul
-    pythonPackages.python-etcd
-    pythonPackages.pyyaml
     pythonPackages.requests
+    pythonPackages.psycopg2
+    pythonPackages.psutil
+    pythonPackages.ntplib
     pythonPackages.simplejson
-    pythonPackages.supervisor
-    pythonPackages.tornado
-    pythonPackages.uptime
-  ] ++ extraBuildInputs;
+    pythonPackages.pyyaml
+    pythonPackages.pymongo_2_9_1
+    pythonPackages.python-etcd
+    pythonPackages.consul
+    docker_1_10
+  ];
   propagatedBuildInputs = with pythonPackages; [ python tornado ];
 
   buildCommand = ''
@@ -82,24 +67,6 @@ in stdenv.mkDerivation rec {
     # Move out default conf.d so that /etc/dd-agent/conf.d is used
     mv $out/agent/conf.d $out/agent/conf.d-system
 
-    # Sometime between 5.11.2 and 5.13.2 datadog moved out all its
-    # checks into separate repository. Copy them back in so dd-agent
-    # service can easily pick and choose by copying out configs into
-    # its etc files.
-    mkdir -p $out/agent/checks.d
-    for i in ${toString integrations}/* # */
-    do
-      if [ -f "$i/check.py" ]; then
-        if [ -f "$i/conf.yaml.default" -o -f "$i/conf.yaml.example" ]; then
-          local name=$(basename $i)
-          cp $i/check.py $out/agent/checks.d/$name.py
-          # Copy .default file first unless it doesn't exist then copy .default
-          cp $i/conf.yaml.default $out/agent/conf.d-system/$name.yaml &> /dev/null || \
-            cp $i/conf.yaml.example $out/agent/conf.d-system/$name.yaml
-        fi
-      fi
-    done
-
     cat > $out/bin/dd-jmxfetch <<EOF
     #!/usr/bin/env bash
     exec ${python}/bin/python $out/agent/jmxfetch.py $@