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Merge pull request #108249 from prusnak/bowtie

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bowtie: init at at 1.3.0
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Sandro 2021-01-03 10:03:24 +01:00 committed by GitHub
commit 6ae069c990
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2 changed files with 27 additions and 0 deletions
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25
pkgs/applications/science/biology/bowtie/default.nix Normal file
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@ -0,0 +1,25 @@
{ stdenv, fetchFromGitHub, zlib }:
stdenv.mkDerivation rec {
pname = "bowtie";
version = "1.3.0";
src = fetchFromGitHub {
owner = "BenLangmead";
repo = pname;
rev = "v${version}";
sha256 = "0da2kzyfsn6xv8mlqsv2vv7k8g0c9d2vgqzq8yqk888yljdzcrjp";
};
buildInputs = [ zlib ];
installFlags = [ "prefix=$(out)" ];
meta = with stdenv.lib; {
description = "An ultrafast memory-efficient short read aligner";
license = licenses.artistic2;
homepage = "http://bowtie-bio.sf.net/bowtie";
maintainers = with maintainers; [ prusnak ];
platforms = platforms.all;
};
}

2
pkgs/top-level/all-packages.nix
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@ -1624,6 +1624,8 @@ in
boot = callPackage ../development/tools/build-managers/boot { };
bowtie = callPackage ../applications/science/biology/bowtie { };
bowtie2 = callPackage ../applications/science/biology/bowtie2 { };
boxfs = callPackage ../tools/filesystems/boxfs { };