Merge pull request #265993 from natsukium/tabula-py/update

pkgs/development/python-modules/tabula-py/default.nix

@@ -7,13 +7,14 @@
 , pandas
 , pytestCheckHook
 , pythonOlder
-, setuptools-scm
 , setuptools
+, setuptools-scm
+, jpype1
 }:
 
 buildPythonPackage rec {
   pname = "tabula-py";
-  version = "2.8.1";
+  version = "2.8.2";
   format = "pyproject";
 
   disabled = pythonOlder "3.8";
@@ -22,28 +23,30 @@ buildPythonPackage rec {
     owner = "chezou";
     repo = pname;
     rev = "refs/tags/v${version}";
-    hash = "sha256-QqTfbSwGaNRXBiAzB1fsEawxCvlIunB1j2jSFD9imPI=";
+    hash = "sha256-Zrq1i+HYXXNulyZ/fv00AgVd7ODj3rP9orLq5rT3ERU=";
   };
 
-  patches = [
-    ./java-interpreter-path.patch
-  ];
-
   postPatch = ''
-    sed -i 's|@JAVA@|${jre}/bin/java|g' $(find -name '*.py')
+    substituteInPlace tabula/backend.py \
+      --replace '"java"' '"${lib.getExe jre}"'
   '';
 
   SETUPTOOLS_SCM_PRETEND_VERSION = version;
 
   nativeBuildInputs = [
+    setuptools
     setuptools-scm
   ];
 
+  buildInputs = [
+    jre
+  ];
+
   propagatedBuildInputs = [
     distro
     numpy
     pandas
-    setuptools
+    jpype1
   ];
 
   nativeCheckInputs = [
@@ -60,6 +63,11 @@ buildPythonPackage rec {
     "test_read_pdf_with_remote_template"
     "test_read_remote_pdf"
     "test_read_remote_pdf_with_custom_user_agent"
+    # not sure what it checks
+    # probably related to jpype, but we use subprocess instead
+    # https://github.com/chezou/tabula-py/issues/352#issuecomment-1730791540
+    # Failed: DID NOT RAISE <class 'RuntimeError'>
+    "test_read_pdf_with_silent_true"
   ];
 
   meta = with lib; {

pkgs/development/python-modules/tabula-py/java-interpreter-path.patch

@@ -1,54 +0,0 @@
-diff -ru origsource/tabula/io.py source/tabula/io.py
---- origsource/tabula/io.py	2022-11-23 17:19:35.419837514 +0100
-+++ source/tabula/io.py	2022-11-23 17:22:08.204194807 +0100
-@@ -79,7 +79,7 @@
-             )
-         )
- 
--    args = ["java"] + java_options + ["-jar", _jar_path()] + options.build_option_list()
-+    args = ["@JAVA@"] + java_options + ["-jar", _jar_path()] + options.build_option_list()
-     if path:
-         args.append(path)
- 
-diff -ru origsource/tabula/util.py source/tabula/util.py
---- origsource/tabula/util.py	2022-11-23 17:19:35.422837521 +0100
-+++ source/tabula/util.py	2022-11-23 17:21:41.514132392 +0100
-@@ -26,7 +26,7 @@
- 
-     try:
-         res = subprocess.check_output(
--            ["java", "-version"], stderr=subprocess.STDOUT
-+            ["@JAVA@", "-version"], stderr=subprocess.STDOUT
-         ).decode()
- 
-     except FileNotFoundError:
-diff -ru origsource/tests/test_read_pdf_table.py source/tests/test_read_pdf_table.py
---- origsource/tests/test_read_pdf_table.py	2022-11-23 17:19:35.422837521 +0100
-+++ source/tests/test_read_pdf_table.py	2022-11-23 17:21:22.008086776 +0100
-@@ -281,7 +281,7 @@
- 
-         tabula.read_pdf(self.pdf_path, encoding="utf-8")
- 
--        target_args = ["java"]
-+        target_args = ["@JAVA@"]
-         if platform.system() == "Darwin":
-             target_args += ["-Djava.awt.headless=true"]
-         target_args += [
-@@ -355,7 +355,7 @@
- 
-         tabula.read_pdf(self.pdf_path, encoding="utf-8", silent=False)
- 
--        target_args = ["java"]
-+        target_args = ["@JAVA@"]
-         if platform.system() == "Darwin":
-             target_args += ["-Djava.awt.headless=true"]
-         target_args += [
-@@ -382,7 +382,7 @@
- 
-         tabula.read_pdf(self.pdf_path, encoding="utf-8", silent=True)
- 
--        target_args = ["java"]
-+        target_args = ["@JAVA@"]
-         if platform.system() == "Darwin":
-             target_args += ["-Djava.awt.headless=true"]
-         target_args += [