Merge pull request #194919 from fabaff/sentry-sdk-bump

python310Packages.sentry-sdk: 1.9.9 -> 1.9.10

pkgs/development/python-modules/openai/default.nix

@@ -1,36 +1,35 @@
 { lib
 , buildPythonPackage
 , fetchFromGitHub
-, pythonOlder
-
-# Python dependencies
+, matplotlib
 , numpy
 , openpyxl
 , pandas
 , pandas-stubs
+, plotly
+, pytest-mock
+, pytestCheckHook
+, pythonOlder
 , requests
 , scikit-learn
 , tenacity
 , tqdm
+, typing-extensions
 , wandb
-
-# Check dependencies
-, pytest-mock
-, pytestCheckHook
 }:
 
 buildPythonPackage rec {
   pname = "openai";
-  version = "0.23.0";
+  version = "0.23.1";
+  format = "setuptools";
 
   disabled = pythonOlder "3.7.1";
 
-  # Use GitHub source since PyPi source does not include tests
   src = fetchFromGitHub {
     owner = "openai";
     repo = "openai-python";
     rev = "v${version}";
-    sha256 = "sha256-VH1XR2FocRX5AYpCruAKwQUXjXqvdJsVwKdtot5Bo+Y=";
+    hash = "sha256-4RdER6ecvHGXTLZ1GnBNI1hIETI8O/t+kuOXiQhMigs=";
   };
 
   propagatedBuildInputs = [
@@ -39,18 +38,40 @@ buildPythonPackage rec {
     pandas
     pandas-stubs
     requests
-    scikit-learn
-    tenacity
     tqdm
-    wandb
+    typing-extensions
+  ];
+
+  passthru.optional-dependencies = {
+    wandb = [
+      wandb
+    ];
+    embeddings = [
+      matplotlib
+      plotly
+      scikit-learn
+      tenacity
+    ];
+  };
+
+  pythonImportsCheck = [
+    "openai"
+  ];
+
+  checkInputs = [
+    pytestCheckHook
+    pytest-mock
+  ];
+
+  pytestFlagsArray = [
+    "openai/tests"
   ];
 
-  pythonImportsCheck = [ "openai" ];
-  checkInputs = [ pytestCheckHook pytest-mock ];
-  pytestFlagsArray = [ "openai/tests" ];
   OPENAI_API_KEY = "sk-foo";
+
   disabledTestPaths = [
-    "openai/tests/test_endpoints.py" # requires a real API key
+    # Requires a real API key
+    "openai/tests/test_endpoints.py"
     "openai/tests/test_file_cli.py"
   ];
 
@@ -58,6 +79,6 @@ buildPythonPackage rec {
     description = "Python client library for the OpenAI API";
     homepage = "https://github.com/openai/openai-python";
     license = licenses.mit;
-    maintainers = [ maintainers.malo ];
+    maintainers = with maintainers; [ malo ];
   };
 }

pkgs/development/python-modules/pandas-stubs/default.nix

@@ -1,39 +1,116 @@
 { lib
 , buildPythonPackage
-, isPy27
 , fetchFromGitHub
+, jinja2
+, matplotlib
+, openpyxl
+, pandas
+, poetry-core
+, scipy
+, sqlalchemy
+, tabulate
+, pyarrow
+, pyreadstat
+, tables
+, pytestCheckHook
+, pythonOlder
+, types-pytz
 , typing-extensions
-, mypy
+, xarray
 }:
 
 buildPythonPackage rec {
   pname = "pandas-stubs";
-  version = "1.2.0.39";
+  version = "1.5.0.221003";
+  format = "pyproject";
 
-  disabled = isPy27;
+  disabled = pythonOlder "3.8";
 
-  # Use GitHub source since PyPi source does not include tests
   src = fetchFromGitHub {
-    owner = "VirtusLab";
+    owner = "pandas-dev";
     repo = pname;
-    rev = "2bd932777d1050ea8f86c527266a4cd205aa15b1";
-    sha256 = "m2McU53NNvRwnWKN9GL8dW1eCGKbTi0471szRQwZu1Q=";
+    rev = "v${version}";
+    sha256 = "sha256-RV0pOTPtlwBmYs3nu8+lNwVpl/VC/VzcXKOQMg9C3qk=";
   };
 
-  propagatedBuildInputs = [
-    typing-extensions
+  nativeBuildInputs = [
+    poetry-core
   ];
 
-  pythonImportsCheck = [ "pandas" ];
-  checkInputs = [ mypy ];
-  checkPhase = ''
-    mypy --config-file mypy.ini third_party/3/pandas tests/snippets
-  '';
+  propagatedBuildInputs = [
+    pandas
+    types-pytz
+  ];
+
+  checkInputs = [
+    jinja2
+    matplotlib
+    openpyxl
+    scipy
+    sqlalchemy
+    tabulate
+    pyarrow
+    tables
+    pyreadstat
+    pytestCheckHook
+    typing-extensions
+    xarray
+  ];
+
+  disabledTests = [
+    # AttributeErrors, missing dependencies, error and warning checks
+    "test_data_error"
+    "test_specification_error"
+    "test_setting_with_copy_error"
+    "test_setting_with_copy_warning"
+    "test_numexpr_clobbering_error"
+    "test_undefined_variable_error"
+    "test_indexing_error"
+    "test_pyperclip_exception"
+    "test_css_warning"
+    "test_possible_data_loss_error"
+    "test_closed_file_error"
+    "test_incompatibility_warning"
+    "test_attribute_conflict_warning"
+    "test_database_error"
+    "test_possible_precision_loss"
+    "test_value_label_type_mismatch"
+    "test_invalid_column_name"
+    "test_categorical_conversion_warning"
+    "test_join"
+    "test_isetframe"
+    "test_reset_index_150_changes"
+    "test_compare_150_changes"
+    "test_quantile_150_changes"
+    "test_resample_150_changes"
+    "test_index_astype"
+    "test_orc"
+    "test_orc_path"
+    "test_orc_buffer"
+    "test_orc_columns"
+    "test_orc_bytes"
+    "test_clipboard"
+    "test_clipboard_iterator"
+    "test_arrow_dtype"
+    "test_aggregate_series_combinations"
+    "test_aggregate_frame_combinations"
+    "test_types_rank"
+    "test_reset_index"
+    "test_types_assert_series_equal"
+    "test_show_version"
+    "test_dummies"
+    "test_from_dummies_args"
+    "test_rolling_step_method"
+  ];
+
+  pythonImportsCheck = [
+    "pandas"
+  ];
 
   meta = with lib; {
     description = "Type annotations for Pandas";
     homepage = "https://github.com/VirtusLab/pandas-stubs";
     license = licenses.mit;
-    maintainers = [ maintainers.malo ];
+    maintainers = with maintainers; [ malo ];
   };
 }

pkgs/development/python-modules/pyreadstat/default.nix

@@ -1,14 +1,26 @@
-{ lib, buildPythonPackage, fetchFromGitHub, cython, zlib, pandas, readstat }:
+{ lib
+, buildPythonPackage
+, cython
+, fetchFromGitHub
+, pandas
+, python
+, pythonOlder
+, readstat
+, zlib
+}:
 
 buildPythonPackage rec {
   pname = "pyreadstat";
   version = "1.1.9";
+  format = "setuptools";
+
+  disabled = pythonOlder "3.7";
 
   src = fetchFromGitHub {
     owner = "Roche";
     repo = "pyreadstat";
     rev = "v${version}";
-    sha256 = "16aa16ybh3ikmlxsg8zm19x9k6r4gpd0sxqagv318w76jjyw1nrs";
+    hash = "sha256-OtvAvZTmcBTGfgp3Ddp9JJuZegr1o6c7rTMOuLwJSpk=";
   };
 
   nativeBuildInputs = [
@@ -24,11 +36,26 @@ buildPythonPackage rec {
     pandas
   ];
 
-  meta = {
-    homepage = "https://github.com/Roche/pyreadstat";
-    description = "Python package to read SAS, SPSS and Stata files into pandas data frames using the readstat C library";
-    license = lib.licenses.asl20;
-    maintainers = with lib.maintainers; [ swflint ];
-  };
+  pythonImportsCheck = [
+    "pyreadstat"
+  ];
 
+  preCheck = ''
+    export HOME=$(mktemp -d);
+  '';
+
+  checkPhase = ''
+    runHook preCheck
+
+    ${python.interpreter} tests/test_basic.py
+
+    runHook postCheck
+  '';
+
+  meta = with lib; {
+    description = "Python package to read SAS, SPSS and Stata files into pandas data frames using the readstat C library";
+    homepage = "https://github.com/Roche/pyreadstat";
+    license = licenses.asl20;
+    maintainers = with maintainers; [ swflint ];
+  };
 }

pkgs/development/python-modules/sentry-sdk/default.nix

@@ -46,7 +46,7 @@
 
 buildPythonPackage rec {
   pname = "sentry-sdk";
-  version = "1.9.9";
+  version = "1.9.10";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -55,7 +55,7 @@ buildPythonPackage rec {
     owner = "getsentry";
     repo = "sentry-python";
     rev = version;
-    hash = "sha256-DIiShIiTHmJdOtf1WYi4ofJdZnsg13VczVvGW+ngE+I=";
+    hash = "sha256-ZrteALD+HsqUwkFDPih8adxNP5TO5JqdPFI8oMBphY4=";
   };
 
   propagatedBuildInputs = [

pkgs/top-level/python-packages.nix

@@ -8413,6 +8413,8 @@ in {
 
   pyramid_multiauth = callPackage ../development/python-modules/pyramid_multiauth { };
 
+  pyreadstat = callPackage ../development/python-modules/pyreadstat { };
+
   pyrealsense2 = toPythonModule (pkgs.librealsense.override {
     enablePython = true;
     pythonPackages = self;
@@ -9564,8 +9566,6 @@ in {
 
   readme_renderer = callPackage ../development/python-modules/readme_renderer { };
 
-  readstats = callPackage ../development/python-modules/pyreadstat { };
-
   readthedocs-sphinx-ext = callPackage ../development/python-modules/readthedocs-sphinx-ext { };
 
   rebulk = callPackage ../development/python-modules/rebulk { };