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perlPackages.BioPerl: init at 1.7.8

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Perl package for biostatistics, with all its dependencies
Url: https://bioperl.org/
This commit is contained in:
Alexis Praga 2022-08-08 17:35:30 +02:00
parent d68ba1d746
commit 4d51d66e2e
1 changed files with 44 additions and 0 deletions
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44
pkgs/top-level/perl-packages.nix
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@ -1521,6 +1521,22 @@ let
}; };
}; };
BioPerl = buildPerlPackage {
pname = "BioPerl";
version = "1.7.8";
src = fetchurl {
url = "mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-1.7.8.tar.gz";
sha256 = "c490a3be7715ea6e4305efd9710e5edab82dabc55fd786b6505b550a30d71738";
};
buildInputs = [ ModuleBuild TestMemoryCycle TestWeaken TestDeep TestWarn TestException TestDifferences ];
propagatedBuildInputs = [ DataStag Error Graph HTTPMessage IOString IOStringy IPCRun LWP ListMoreUtils SetScalar TestMost TestRequiresInternet URI XMLDOM XMLLibXML XMLSAX XMLSAXBase XMLSAXWriter XMLTwig XMLWriter YAML DBFile libxml_perl ];
meta = {
homepage = "https://metacpan.org/release/BioPerl";
description = "Perl modules for biology";
license = with lib.licenses; [ artistic1 gpl1Plus ];
};
};
BitVector = buildPerlPackage { BitVector = buildPerlPackage {
pname = "Bit-Vector"; pname = "Bit-Vector";
version = "7.4"; version = "7.4";
@ -5439,6 +5455,20 @@ let
}; };
}; };
DataStag = buildPerlPackage {
pname = "Data-Stag";
version = "0.14";
src = fetchurl {
url = "mirror://cpan/authors/id/C/CM/CMUNGALL/Data-Stag-0.14.tar.gz";
sha256 = "4ab122508d2fb86d171a15f4006e5cf896d5facfa65219c0b243a89906258e59";
};
propagatedBuildInputs = [ IOString ];
meta = {
description = "Structured Tags";
license = with lib.licenses; [ artistic1 gpl1Plus ];
};
};
DataStreamBulk = buildPerlPackage { DataStreamBulk = buildPerlPackage {
pname = "Data-Stream-Bulk"; pname = "Data-Stream-Bulk";
version = "0.11"; version = "0.11";
@ -23306,6 +23336,20 @@ let
}; };
}; };
TestWeaken = buildPerlPackage {
pname = "Test-Weaken";
version = "3.022000";
src = fetchurl {
url = "mirror://cpan/authors/id/K/KR/KRYDE/Test-Weaken-3.022000.tar.gz";
sha256 = "2631a87121310262e0e96107a6fa0ed69487b7701520773bee5fa9accc295f5b";
};
propagatedBuildInputs = [ ScalarListUtils ];
meta = {
description = "Test that freed memory objects were, indeed, freed";
license = with lib.licenses; [ artistic1 gpl1Plus ];
};
};
TestWithoutModule = buildPerlPackage { TestWithoutModule = buildPerlPackage {
pname = "Test-Without-Module"; pname = "Test-Without-Module";
version = "0.20"; version = "0.20";