python3Packages.dm-sonnet, python3Packages.graph_nets: remove
This commit is contained in:
Uri Baghin
parent
7b782b4da3
commit
31ed8a5745
@ -1,91 +0,0 @@
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{ lib
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, fetchFromGitHub
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, bazel_0_26
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, buildBazelPackage
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, buildPythonPackage
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, git
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, python
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, six
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, absl-py
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, semantic-version
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, contextlib2
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, wrapt
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, tensorflow
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, tensorflow-probability
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, tensorflow-estimator
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}:
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let
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version = "1.33";
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# first build all binaries and generate setup.py using bazel
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bazel-build = buildBazelPackage {
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bazel = bazel_0_26;
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name = "dm-sonnet-bazel-${version}";
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src = fetchFromGitHub {
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owner = "deepmind";
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repo = "sonnet";
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rev = "v${version}";
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sha256 = "1nqsja1s8jrkq6v1whgh7smk17313mjr9vs3k5c1m8px4yblzhqc";
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};
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nativeBuildInputs = [
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git # needed to fetch the bazel deps (protobuf in particular)
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];
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# see https://github.com/deepmind/sonnet/blob/master/docs/INSTALL.md
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bazelTarget = ":install";
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fetchAttrs = {
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sha256 = "09dzxs2v5wpiaxrz7qj257q1fbx0gxwbk0jyx58n81m5kys7yj9k";
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};
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buildAttrs = {
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preBuild = ''
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patchShebangs .
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'';
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installPhase = ''
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# do not generate a wheel, instead just copy the generated files to $out to be installed by buildPythonPackage
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sed -i 's,.*bdist_wheel.*,cp -rL . "$out"; exit 0,' bazel-bin/install
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# the target directory "dist" does not actually matter since we're not generating a wheel
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bazel-bin/install dist
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'';
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};
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};
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# now use pip to install the package prepared by bazel
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in buildPythonPackage {
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pname = "dm-sonnet";
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inherit version;
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src = bazel-build;
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propagatedBuildInputs = [
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six
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absl-py
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semantic-version
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contextlib2
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wrapt
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tensorflow
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tensorflow-probability
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tensorflow-estimator
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];
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# not sure how to properly run the real test suite -- through bazel?
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checkPhase = ''
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${python.interpreter} -c "import sonnet"
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'';
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meta = with lib; {
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description = "TensorFlow-based neural network library";
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homepage = "https://sonnet.dev";
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license = licenses.asl20;
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maintainers = with maintainers; [ timokau ];
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platforms = platforms.linux;
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broken = true; # depends on older TensorFlow version than is currently packaged
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};
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}
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@ -1,45 +0,0 @@
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{ lib
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, buildPythonPackage
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, fetchPypi
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, tensorflow
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, absl-py
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, dm-sonnet
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, networkx
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, numpy
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, setuptools
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, six
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, future
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}:
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buildPythonPackage rec {
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pname = "graph_nets";
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version = "1.1.0";
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src = fetchPypi {
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inherit pname version;
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sha256 = "278a040674bef295aaf8bb5b0d1b3f207144dc68f0bcfe3f14912b9b85eb0927";
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};
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postPatch = ''
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# https://github.com/deepmind/graph_nets/issues/63
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sed -i 's/dm-sonnet==1.23/dm-sonnet/' setup.py
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'';
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propagatedBuildInputs = [
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tensorflow
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absl-py
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dm-sonnet
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networkx
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numpy
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setuptools
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six
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future
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];
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meta = with lib; {
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description = "Build Graph Nets in Tensorflow";
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homepage = "https://github.com/deepmind/graph_nets";
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license = licenses.asl20;
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maintainers = with maintainers; [ timokau ];
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};
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}
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@ -279,12 +279,7 @@ stdenv'.mkDerivation rec {
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# fixed-output hashes of the fetch phase need to be spot-checked manually
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downstream = recurseIntoAttrs ({
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inherit bazel-watcher;
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}
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# dm-sonnet is only packaged for linux
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// (lib.optionalAttrs stdenv.isLinux {
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# TODO(timokau) dm-sonnet is broken currently
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# dm-sonnet-linux = python3.pkgs.dm-sonnet;
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}));
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});
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};
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# update the list of workspace dependencies
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@ -280,12 +280,7 @@ stdenv'.mkDerivation rec {
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# fixed-output hashes of the fetch phase need to be spot-checked manually
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downstream = recurseIntoAttrs ({
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inherit bazel-watcher;
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}
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# dm-sonnet is only packaged for linux
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// (lib.optionalAttrs stdenv.isLinux {
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# TODO(timokau) dm-sonnet is broken currently
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# dm-sonnet-linux = python3.pkgs.dm-sonnet;
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}));
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});
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};
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# update the list of workspace dependencies
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@ -303,12 +303,7 @@ stdenv.mkDerivation rec {
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# fixed-output hashes of the fetch phase need to be spot-checked manually
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downstream = recurseIntoAttrs ({
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inherit bazel-watcher;
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}
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# dm-sonnet is only packaged for linux
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// (lib.optionalAttrs stdenv.isLinux {
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# TODO(timokau) dm-sonnet is broken currently
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# dm-sonnet-linux = python3.pkgs.dm-sonnet;
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}));
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});
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};
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# update the list of workspace dependencies
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@ -338,12 +338,7 @@ stdenv.mkDerivation rec {
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# fixed-output hashes of the fetch phase need to be spot-checked manually
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downstream = recurseIntoAttrs ({
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inherit bazel-watcher;
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}
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# dm-sonnet is only packaged for linux
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// (lib.optionalAttrs stdenv.isLinux {
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# TODO(timokau) dm-sonnet is broken currently
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# dm-sonnet-linux = python3.pkgs.dm-sonnet;
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}));
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});
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};
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src_for_updater = stdenv.mkDerivation rec {
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@ -300,12 +300,7 @@ stdenv.mkDerivation rec {
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# fixed-output hashes of the fetch phase need to be spot-checked manually
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downstream = recurseIntoAttrs ({
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inherit bazel-watcher;
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}
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# dm-sonnet is only packaged for linux
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// (lib.optionalAttrs stdenv.isLinux {
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# TODO(timokau) dm-sonnet is broken currently
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# dm-sonnet-linux = python3.pkgs.dm-sonnet;
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}));
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});
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};
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src_for_updater = stdenv.mkDerivation rec {
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@ -2408,8 +2408,6 @@ in {
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dm-haiku = callPackage ../development/python-modules/dm-haiku { };
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dm-sonnet = callPackage ../development/python-modules/dm-sonnet { };
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dm-tree = callPackage ../development/python-modules/dm-tree {
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abseil-cpp = pkgs.abseil-cpp.override {
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cxxStandard = "14";
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@ -3584,8 +3582,6 @@ in {
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graphite-web = callPackage ../development/python-modules/graphite-web { };
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graph_nets = callPackage ../development/python-modules/graph_nets { };
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graphene = callPackage ../development/python-modules/graphene { };
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graphene-django = callPackage ../development/python-modules/graphene-django { };
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