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Updated emboss package to 6.0.1

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svn path=/nixpkgs/trunk/; revision=12399
This commit is contained in:
Pjotr Prins 2008-07-23 08:22:23 +00:00
parent 60eabad296
commit 0014ffcbae
1 changed files with 13 additions and 13 deletions
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26
pkgs/applications/science/biology/emboss/default.nix
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@ -1,29 +1,29 @@
{stdenv, fetchurl, readline, perl, libX11, libpng, libXt, zlib}:
stdenv.mkDerivation {
name = "emboss-5.0.0-9";
name = "emboss-6.0.1";
src = fetchurl {
url = ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-5.0.0.tar.gz;
sha256 = "1bj0bxfj97cgnk3w3123cqn5sq5xsbvzs8bzvqkgy6d7hadz1rk4";
};
patch = fetchurl {
url = ftp://emboss.open-bio.org/pub/EMBOSS/fixes/patches/patch-1-9.gz;
sha256 = "1pfn5zdxrr71c3kwpdkzmmsqvdwkmynkvcr707vqh73h9cjhk3c1";
url = ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.0.1.tar.gz;
sha256 = "0g939k9wmpvmy55hqmbbzj6kj6agg4izymv492zqiawxm812jd9y";
};
# patch = fetchurl {
# url = ftp://emboss.open-bio.org/pub/EMBOSS/fixes/patches/patch-1-9.gz;
# sha256 = "1pfn5zdxrr71c3kwpdkzmmsqvdwkmynkvcr707vqh73h9cjhk3c1";
# };
buildInputs = [readline perl libpng libX11 libXt zlib];
preConfigure = ''
gzip -d $patch | patch -p1
'';
# preConfigure = ''
# gzip -d $patch | patch -p1
# '';
meta = {
description = "EMBOSS is 'The European Molecular Biology Open Software Suite'";
longDescription = ''EMBOSS is a free Open Source software analysis package
specially developed for the needs of the molecular biology (e.g. EMBnet)
user community. The software automatically copes with data in a variety of
formats and even allows transparent retrieval of sequence data from the
web.'';
user community, including libraries. The software automatically copes with
data in a variety of formats and even allows transparent retrieval of
sequence data from the web.'';
license = "GPL2";
homepage = http://emboss.sourceforge.net/;
};