35 lines
767 B
Nix
35 lines
767 B
Nix
|
{ stdenv, fetchurl, zlib }:
|
||
|
|
|
||
|
|
stdenv.mkDerivation rec {
|
||
|
|
name = "${pname}-${version}";
|
||
|
|
pname = "samtools";
|
||
|
|
version = "0.1.19";
|
||
|
|
|
||
|
|
src = fetchurl {
|
||
|
|
url = "mirror://sourceforge/samtools/${name}.tar.bz2";
|
||
|
|
sha256 = "d080c9d356e5f0ad334007e4461cbcee3c4ca97b8a7a5a48c44883cf9dee63d4";
|
||
|
|
};
|
||
|
|
|
||
|
|
patches = [
|
||
|
|
./samtools-0.1.19-no-curses.patch
|
||
|
|
];
|
||
|
|
|
||
|
|
buildInputs = [ zlib ];
|
||
|
|
|
||
|
|
installPhase = ''
|
||
|
|
mkdir -p $out/bin
|
||
|
|
mkdir -p $out/share/man
|
||
|
|
|
||
|
|
cp samtools $out/bin
|
||
|
|
cp samtools.1 $out/share/man
|
||
|
|
'';
|
||
|
|
|
||
|
|
meta = with stdenv.lib; {
|
||
|
|
description = "Tools for manipulating SAM/BAM/CRAM format";
|
||
|
|
license = licenses.mit;
|
||
|
|
homepage = http://samtools.sourceforge.net/;
|
||
|
|
platforms = platforms.unix;
|
||
|
|
maintainers = [ maintainers.unode ];
|
||
|
|
};
|
||
|
|
}
|